PA257_4904 adf37ad590ba42a26959446a70f92993 312 Gene3D G3DSA:2.60.120.330 49 235 2.1E-45 T 12-10-2018 IPR027443 Isopenicillin N synthase-like PA257_4904 adf37ad590ba42a26959446a70f92993 312 SUPERFAMILY SSF51197 105 227 3.02E-17 T 12-10-2018 PA257_4904 adf37ad590ba42a26959446a70f92993 312 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 75 228 5.2E-47 T 12-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 PA257_6786 709e779466aaa00a036b7efcbaa7d793 224 SUPERFAMILY SSF56235 1 224 1.7E-79 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_6786 709e779466aaa00a036b7efcbaa7d793 224 Pfam PF06267 Family of unknown function (DUF1028) 2 191 2.5E-68 T 12-10-2018 IPR010430 Protein of unknown function DUF1028 PA257_6786 709e779466aaa00a036b7efcbaa7d793 224 Gene3D G3DSA:3.60.20.10 1 213 1.9E-70 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_2775 741084dcada4d35fd6c3e97c22d1246d 426 Gene3D G3DSA:2.40.160.10 10 426 1.3E-143 T 12-10-2018 IPR023614 Porin domain superfamily PA257_2775 741084dcada4d35fd6c3e97c22d1246d 426 Pfam PF03573 outer membrane porin, OprD family 28 424 1.4E-138 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_4300 a8f3a1c2daabeec968d9599383441cca 332 SUPERFAMILY SSF53850 22 329 3.76E-83 T 12-10-2018 PA257_4300 a8f3a1c2daabeec968d9599383441cca 332 Gene3D G3DSA:3.40.190.10 29 297 3.4E-124 T 12-10-2018 PA257_4300 a8f3a1c2daabeec968d9599383441cca 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 23 328 6.4E-133 T 12-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 PA257_4300 a8f3a1c2daabeec968d9599383441cca 332 Gene3D G3DSA:3.40.190.10 117 327 3.4E-124 T 12-10-2018 PA257_4300 a8f3a1c2daabeec968d9599383441cca 332 Pfam PF13531 Bacterial extracellular solute-binding protein 31 280 7.7E-41 T 12-10-2018 PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 348 492 5.5E-37 T 12-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 419 435 5.8E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 336 352 5.8E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 357 368 5.8E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 302 322 5.8E-26 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 Gene3D G3DSA:3.10.170.10 198 349 1.0E-67 T 12-10-2018 PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 Gene3D G3DSA:3.10.450.40 115 197 4.8E-22 T 12-10-2018 PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 Gene3D G3DSA:1.10.390.10 350 497 4.6E-51 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 Pfam PF03413 Peptidase propeptide and YPEB domain 123 192 1.7E-8 T 12-10-2018 IPR025711 PepSY domain PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 208 345 4.2E-34 T 12-10-2018 IPR013856 Peptidase M4 domain GO:0004222 PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 SUPERFAMILY SSF55486 199 494 9.52E-89 T 12-10-2018 PA257_1497 d782dad6732da4d5f0adc35c2359f0f0 498 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 56 90 6.0E-6 T 12-10-2018 IPR011096 FTP domain PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:1.20.1640.10 506 1010 8.8E-295 T 12-10-2018 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 6.3E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 6.3E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 6.3E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 6.3E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 6.3E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 6.3E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 6.3E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.3E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.3E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:3.30.2090.10 706 794 8.8E-295 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82866 294 493 6.41E-48 T 12-10-2018 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:3.30.70.1430 560 654 8.8E-295 T 12-10-2018 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 Pfam PF00873 AcrB/AcrD/AcrF family 6 1013 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82714 708 791 4.58E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:3.30.2090.10 179 271 8.8E-295 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:3.30.70.1440 655 852 8.8E-295 T 12-10-2018 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82693 558 649 4.97E-12 T 12-10-2018 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82866 794 1019 1.15E-43 T 12-10-2018 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:1.20.1640.10 10 505 8.8E-295 T 12-10-2018 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82714 183 268 1.44E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82693 40 134 2.96E-22 T 12-10-2018 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82693 135 326 5.23E-19 T 12-10-2018 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:3.30.70.1430 40 802 8.8E-295 T 12-10-2018 PA257_3044 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:3.30.70.1320 135 328 8.8E-295 T 12-10-2018 PA257_2034 066a6eb8f32d162abc3c16c42e7774c3 216 Gene3D G3DSA:1.20.1440.100 15 87 5.0E-67 T 12-10-2018 PA257_2034 066a6eb8f32d162abc3c16c42e7774c3 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 189 1.5E-28 T 12-10-2018 PA257_2034 066a6eb8f32d162abc3c16c42e7774c3 216 SUPERFAMILY SSF56784 2 206 1.68E-28 T 12-10-2018 IPR036412 HAD-like superfamily PA257_2034 066a6eb8f32d162abc3c16c42e7774c3 216 Gene3D G3DSA:3.40.50.1000 4 212 5.0E-67 T 12-10-2018 IPR023214 HAD superfamily PA257_2034 066a6eb8f32d162abc3c16c42e7774c3 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 5.5E-48 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like PA257_2034 066a6eb8f32d162abc3c16c42e7774c3 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 6.8E-31 T 12-10-2018 PA257_6397 32e27271a0908880681ff4d96503a833 453 SUPERFAMILY SSF51556 50 374 9.53E-74 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_6397 32e27271a0908880681ff4d96503a833 453 Gene3D G3DSA:3.20.20.140 52 434 4.3E-202 T 12-10-2018 PA257_6397 32e27271a0908880681ff4d96503a833 453 SUPERFAMILY SSF51338 359 436 2.27E-13 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_6397 32e27271a0908880681ff4d96503a833 453 Pfam PF01979 Amidohydrolase family 48 428 3.0E-37 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_6397 32e27271a0908880681ff4d96503a833 453 Gene3D G3DSA:2.30.40.10 13 432 4.3E-202 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_6397 32e27271a0908880681ff4d96503a833 453 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 452 1.2E-218 T 12-10-2018 IPR010252 Formiminoglutamate deiminase PA257_3634 cb64ef22afbdd8981befb35945b435a3 491 Gene3D G3DSA:3.50.50.60 3 156 3.0E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3634 cb64ef22afbdd8981befb35945b435a3 491 Pfam PF00743 Flavin-binding monooxygenase-like 12 345 8.9E-20 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 PA257_3634 cb64ef22afbdd8981befb35945b435a3 491 SUPERFAMILY SSF51905 283 487 1.62E-24 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3634 cb64ef22afbdd8981befb35945b435a3 491 SUPERFAMILY SSF51905 10 249 1.3E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3634 cb64ef22afbdd8981befb35945b435a3 491 Gene3D G3DSA:3.50.50.60 307 489 2.0E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3634 cb64ef22afbdd8981befb35945b435a3 491 Gene3D G3DSA:3.50.50.60 157 229 1.5E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6111 c255426b6fd1eed31c3add93f9b44573 704 Pfam PF00593 TonB dependent receptor 232 702 2.6E-72 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_6111 c255426b6fd1eed31c3add93f9b44573 704 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 62 703 1.3E-114 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_6111 c255426b6fd1eed31c3add93f9b44573 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 159 3.3E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_6111 c255426b6fd1eed31c3add93f9b44573 704 Gene3D G3DSA:2.40.170.20 168 704 4.3E-147 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_6111 c255426b6fd1eed31c3add93f9b44573 704 SUPERFAMILY SSF56935 18 704 5.09E-140 T 12-10-2018 PA257_6111 c255426b6fd1eed31c3add93f9b44573 704 Gene3D G3DSA:2.170.130.10 35 167 5.8E-34 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 608 624 1.9E-5 T 12-10-2018 PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 393 412 1.9E-5 T 12-10-2018 PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 SUPERFAMILY SSF51905 380 683 3.75E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 SUPERFAMILY SSF51395 4 370 5.64E-98 T 12-10-2018 PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 Gene3D G3DSA:3.40.50.720 392 679 4.9E-65 T 12-10-2018 PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 343 1.1E-62 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 392 642 3.2E-10 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 Gene3D G3DSA:3.20.20.70 1 380 9.2E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 Gene3D G3DSA:3.50.50.60 487 616 4.9E-65 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 414 3.9E-7 T 12-10-2018 PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 609 623 3.9E-7 T 12-10-2018 PA257_6793 9c9a14dbacfd9ca5460b078f145a541e 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 660 667 3.9E-7 T 12-10-2018 PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 SMART SM00304 168 221 1.3E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 431 1.6E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 Pfam PF00672 HAMP domain 168 217 2.5E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 SMART SM00387 320 432 1.3E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 Gene3D G3DSA:3.30.565.10 284 432 3.9E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 SMART SM00388 222 282 5.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 Gene3D G3DSA:1.10.287.130 165 277 1.7E-22 T 12-10-2018 PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 278 6.7E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 SUPERFAMILY SSF55874 284 431 2.49E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6551 d0430ba83b1c660afa5b54b31c262c3a 439 SUPERFAMILY SSF47384 206 279 5.1E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_1937 d4f7a5d9513cc836fb90a31f2e713daa 728 Pfam PF07244 Surface antigen variable number repeat 333 394 1.6E-5 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PA257_1937 d4f7a5d9513cc836fb90a31f2e713daa 728 Gene3D G3DSA:3.10.20.310 328 402 3.0E-10 T 12-10-2018 PA257_1937 d4f7a5d9513cc836fb90a31f2e713daa 728 SUPERFAMILY SSF52151 18 302 5.23E-61 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PA257_1937 d4f7a5d9513cc836fb90a31f2e713daa 728 Gene3D G3DSA:2.40.160.50 425 728 7.3E-8 T 12-10-2018 PA257_1937 d4f7a5d9513cc836fb90a31f2e713daa 728 Pfam PF01103 Surface antigen 449 728 2.9E-9 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 PA257_1937 d4f7a5d9513cc836fb90a31f2e713daa 728 Gene3D G3DSA:3.40.1090.10 132 269 1.8E-24 T 12-10-2018 PA257_1937 d4f7a5d9513cc836fb90a31f2e713daa 728 Gene3D G3DSA:3.40.1090.10 14 127 4.1E-31 T 12-10-2018 PA257_1937 d4f7a5d9513cc836fb90a31f2e713daa 728 Pfam PF01734 Patatin-like phospholipase 27 219 7.8E-28 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 PA257_1313 05bc1e4c59060ea3074f3ec721b3b5f7 311 Gene3D G3DSA:3.40.30.110 1 122 1.4E-37 T 12-10-2018 PA257_1313 05bc1e4c59060ea3074f3ec721b3b5f7 311 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 77 1.6E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_1313 05bc1e4c59060ea3074f3ec721b3b5f7 311 Gene3D G3DSA:3.40.30.110 206 311 6.8E-29 T 12-10-2018 PA257_1313 05bc1e4c59060ea3074f3ec721b3b5f7 311 SUPERFAMILY SSF52833 4 91 1.51E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_1313 05bc1e4c59060ea3074f3ec721b3b5f7 311 SUPERFAMILY SSF47616 139 217 1.08E-13 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_1313 05bc1e4c59060ea3074f3ec721b3b5f7 311 Pfam PF13410 Glutathione S-transferase, C-terminal domain 150 214 3.9E-8 T 12-10-2018 PA257_1978 bb522891c55816db9df78a419f156e84 156 Gene3D G3DSA:3.10.129.10 2 156 1.4E-51 T 12-10-2018 PA257_1978 bb522891c55816db9df78a419f156e84 156 SUPERFAMILY SSF54637 5 141 2.04E-38 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_1978 bb522891c55816db9df78a419f156e84 156 PRINTS PR01483 Fatty acid synthase signature 26 48 3.0E-5 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PA257_1978 bb522891c55816db9df78a419f156e84 156 PRINTS PR01483 Fatty acid synthase signature 48 69 3.0E-5 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PA257_1978 bb522891c55816db9df78a419f156e84 156 Pfam PF01575 MaoC like domain 16 116 2.4E-25 T 12-10-2018 IPR002539 MaoC-like dehydratase domain PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 SMART SM01086 794 884 1.7E-24 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 SUPERFAMILY SSF52540 242 582 5.75E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 655 673 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Gene3D G3DSA:1.10.8.60 794 885 7.7E-22 T 12-10-2018 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 670 688 6.3E-40 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 625 643 6.3E-40 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 699 717 6.3E-40 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 732 746 6.3E-40 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Gene3D G3DSA:3.40.50.300 242 433 2.3E-70 T 12-10-2018 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Gene3D G3DSA:1.10.8.60 434 565 2.8E-41 T 12-10-2018 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Gene3D G3DSA:1.10.1780.10 85 227 1.4E-32 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 SUPERFAMILY SSF81923 87 228 5.3E-27 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Gene3D G3DSA:4.10.860.10 493 551 2.8E-41 T 12-10-2018 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Pfam PF07724 AAA domain (Cdc48 subfamily) 620 788 5.3E-54 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Gene3D G3DSA:3.40.50.300 574 793 1.0E-87 T 12-10-2018 PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 SUPERFAMILY SSF52540 570 881 1.57E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 794 873 7.3E-22 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 100 147 1.1E-7 T 12-10-2018 IPR004176 Clp, N-terminal PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 175 226 5.3E-15 T 12-10-2018 IPR004176 Clp, N-terminal PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 SMART SM00382 281 429 5.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 SMART SM00382 621 795 4.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0598 bf2638b74bf03d6daf2492cfeda6de5b 932 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 286 419 1.3E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_6058 726be3c7765d140abe9ebc77976364b7 451 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 221 445 2.9E-50 T 12-10-2018 PA257_6058 726be3c7765d140abe9ebc77976364b7 451 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 284 295 2.3E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6058 726be3c7765d140abe9ebc77976364b7 451 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 337 345 2.3E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6058 726be3c7765d140abe9ebc77976364b7 451 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 357 376 2.3E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6058 726be3c7765d140abe9ebc77976364b7 451 SUPERFAMILY SSF51735 211 449 1.39E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6058 726be3c7765d140abe9ebc77976364b7 451 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 215 388 5.0E-7 T 12-10-2018 PA257_6058 726be3c7765d140abe9ebc77976364b7 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 284 295 3.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6058 726be3c7765d140abe9ebc77976364b7 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 411 431 3.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6058 726be3c7765d140abe9ebc77976364b7 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 357 376 3.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6058 726be3c7765d140abe9ebc77976364b7 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 331 347 3.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6058 726be3c7765d140abe9ebc77976364b7 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 378 395 3.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6058 726be3c7765d140abe9ebc77976364b7 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 233 3.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6058 726be3c7765d140abe9ebc77976364b7 451 Gene3D G3DSA:3.40.50.720 210 450 2.4E-67 T 12-10-2018 PA257_6058 726be3c7765d140abe9ebc77976364b7 451 Gene3D G3DSA:3.40.50.720 24 208 1.1E-51 T 12-10-2018 PA257_6058 726be3c7765d140abe9ebc77976364b7 451 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 344 372 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_6814 7fffbac0136ff8fef594b3df5008f715 211 Gene3D G3DSA:3.30.70.1520 46 127 4.8E-56 T 12-10-2018 PA257_6814 7fffbac0136ff8fef594b3df5008f715 211 SUPERFAMILY SSF103025 84 209 4.91E-21 T 12-10-2018 PA257_6814 7fffbac0136ff8fef594b3df5008f715 211 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 52 204 8.2E-62 T 12-10-2018 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PA257_6814 7fffbac0136ff8fef594b3df5008f715 211 Pfam PF04268 Sarcosine oxidase, gamma subunit family 53 204 3.2E-59 T 12-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PA257_6814 7fffbac0136ff8fef594b3df5008f715 211 Gene3D G3DSA:3.30.1360.120 39 205 4.8E-56 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PA257_0735 c70cccf9e28718aeeee1bd968c474fad 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 41.565 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 PA257_0735 c70cccf9e28718aeeee1bd968c474fad 423 Pfam PF04285 Protein of unknown function (DUF444) 4 419 5.0E-180 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 PA257_6192 dae31cb24a2b9872dd8b287d99c25467 404 Gene3D G3DSA:3.40.50.2300 178 308 4.7E-110 T 12-10-2018 PA257_6192 dae31cb24a2b9872dd8b287d99c25467 404 SUPERFAMILY SSF53822 58 401 8.99E-92 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_6192 dae31cb24a2b9872dd8b287d99c25467 404 Pfam PF13458 Periplasmic binding protein 59 398 5.3E-65 T 12-10-2018 IPR028081 Leucine-binding protein domain PA257_6192 dae31cb24a2b9872dd8b287d99c25467 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 100 118 1.6E-23 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_6192 dae31cb24a2b9872dd8b287d99c25467 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 59 75 1.6E-23 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_6192 dae31cb24a2b9872dd8b287d99c25467 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 313 326 1.6E-23 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_6192 dae31cb24a2b9872dd8b287d99c25467 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 81 97 1.6E-23 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_6192 dae31cb24a2b9872dd8b287d99c25467 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 364 379 1.6E-23 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_6192 dae31cb24a2b9872dd8b287d99c25467 404 Gene3D G3DSA:3.40.50.2300 66 380 4.7E-110 T 12-10-2018 PA257_5297 56128a8be3a396f1028e64dc60943d16 464 SUPERFAMILY SSF75304 2 451 8.24E-124 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_5297 56128a8be3a396f1028e64dc60943d16 464 Gene3D G3DSA:3.90.1300.10 2 456 2.1E-123 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_5297 56128a8be3a396f1028e64dc60943d16 464 Pfam PF01425 Amidase 28 442 1.5E-89 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_0266 dc6c429c65b8d9b806051f692f228528 292 SUPERFAMILY SSF103481 195 291 1.44E-14 T 12-10-2018 PA257_0266 dc6c429c65b8d9b806051f692f228528 292 SUPERFAMILY SSF103481 53 152 1.7E-14 T 12-10-2018 PA257_0266 dc6c429c65b8d9b806051f692f228528 292 Pfam PF00892 EamA-like transporter family 159 286 3.4E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_0266 dc6c429c65b8d9b806051f692f228528 292 Pfam PF00892 EamA-like transporter family 16 148 2.4E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 Gene3D G3DSA:1.10.10.60 391 441 5.0E-13 T 12-10-2018 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 Gene3D G3DSA:3.40.50.2300 2 136 1.3E-34 T 12-10-2018 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 Gene3D G3DSA:1.10.8.60 317 382 5.1E-19 T 12-10-2018 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 SMART SM00382 166 328 6.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 SUPERFAMILY SSF52540 146 375 4.83E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 Pfam PF02954 Bacterial regulatory protein, Fis family 398 438 3.5E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 Gene3D G3DSA:3.40.50.300 137 316 1.8E-62 T 12-10-2018 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 SUPERFAMILY SSF52172 3 191 5.83E-44 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 Pfam PF00158 Sigma-54 interaction domain 146 312 2.7E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 SUPERFAMILY SSF46689 358 440 5.82E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 404 421 4.4E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 421 441 4.4E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 SMART SM00448 5 116 2.5E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4458 d98c965a1dfc4ba3fea59828aecb26e3 441 Pfam PF00072 Response regulator receiver domain 7 115 4.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3410 b733c98c8046adce8dfafe213db4040e 442 SUPERFAMILY SSF51445 43 358 3.1E-62 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_3410 b733c98c8046adce8dfafe213db4040e 442 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 48 285 1.3E-5 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 PA257_3410 b733c98c8046adce8dfafe213db4040e 442 Gene3D G3DSA:3.20.20.80 41 356 4.4E-45 T 12-10-2018 PA257_0960 bae4afa29ad0000e855e07cb0c37fc6c 418 Pfam PF03573 outer membrane porin, OprD family 28 416 1.6E-149 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_0960 bae4afa29ad0000e855e07cb0c37fc6c 418 Gene3D G3DSA:2.40.160.10 32 418 9.6E-174 T 12-10-2018 IPR023614 Porin domain superfamily PA257_6745 9eb0efa839bcbfd0b9036ba32e3026bd 178 SUPERFAMILY SSF64288 8 170 2.75E-49 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_6745 9eb0efa839bcbfd0b9036ba32e3026bd 178 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 5 172 27.277 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 PA257_6745 9eb0efa839bcbfd0b9036ba32e3026bd 178 Pfam PF04345 Chorismate lyase 1 175 5.5E-78 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 PA257_6745 9eb0efa839bcbfd0b9036ba32e3026bd 178 Gene3D G3DSA:3.40.1410.10 2 170 1.4E-47 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_4584 fafd531a589903919758b36bd39088a1 385 SUPERFAMILY SSF50685 41 380 2.89E-125 T 12-10-2018 IPR036908 RlpA-like domain superfamily PA257_4584 fafd531a589903919758b36bd39088a1 385 Pfam PF06725 3D domain 303 375 1.2E-23 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 PA257_4584 fafd531a589903919758b36bd39088a1 385 Gene3D G3DSA:2.40.40.10 47 377 8.1E-111 T 12-10-2018 IPR036908 RlpA-like domain superfamily PA257_4584 fafd531a589903919758b36bd39088a1 385 Gene3D G3DSA:2.40.240.50 125 286 8.1E-111 T 12-10-2018 PA257_4584 fafd531a589903919758b36bd39088a1 385 PIRSF PIRSF019422 4 383 2.5E-118 T 12-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A PA257_4584 fafd531a589903919758b36bd39088a1 385 Pfam PF03562 MltA specific insert domain 55 280 3.7E-76 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 PA257_4584 fafd531a589903919758b36bd39088a1 385 SMART SM00925 126 281 1.4E-85 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 PA257_0967 677d61ff01ed5a870cb42b20e629b087 476 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 45 473 9.6E-169 T 12-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 PA257_0967 677d61ff01ed5a870cb42b20e629b087 476 Pfam PF13746 4Fe-4S dicluster domain 223 329 4.9E-45 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_0967 677d61ff01ed5a870cb42b20e629b087 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 276 287 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_0967 677d61ff01ed5a870cb42b20e629b087 476 Pfam PF12801 4Fe-4S binding domain 101 130 4.4E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_0967 677d61ff01ed5a870cb42b20e629b087 476 Gene3D G3DSA:2.60.40.10 360 474 1.1E-30 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_0967 677d61ff01ed5a870cb42b20e629b087 476 SUPERFAMILY SSF54862 109 364 2.09E-33 T 12-10-2018 PA257_0967 677d61ff01ed5a870cb42b20e629b087 476 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 474 1.2E-27 T 12-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain PA257_4250 d03021d059a49093437c3cf4aafd3c57 514 Gene3D G3DSA:3.50.50.60 313 495 4.8E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4250 d03021d059a49093437c3cf4aafd3c57 514 SUPERFAMILY SSF51905 11 237 1.65E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4250 d03021d059a49093437c3cf4aafd3c57 514 Pfam PF00743 Flavin-binding monooxygenase-like 14 216 1.6E-12 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 PA257_4250 d03021d059a49093437c3cf4aafd3c57 514 SUPERFAMILY SSF51905 283 486 2.87E-22 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4250 d03021d059a49093437c3cf4aafd3c57 514 Gene3D G3DSA:3.50.50.60 7 173 4.5E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5952 81075996d791d34250ee46b1137f5ce9 65 PIRSF PIRSF039008 1 65 4.2E-32 T 12-10-2018 IPR026042 Stress response protein YjbJ PA257_5952 81075996d791d34250ee46b1137f5ce9 65 Gene3D G3DSA:1.10.1470.10 1 65 1.9E-32 T 12-10-2018 IPR036629 YjbJ superfamily PA257_5952 81075996d791d34250ee46b1137f5ce9 65 Pfam PF05532 CsbD-like 4 55 4.1E-20 T 12-10-2018 IPR008462 CsbD-like domain PA257_5952 81075996d791d34250ee46b1137f5ce9 65 SUPERFAMILY SSF69047 1 64 3.79E-25 T 12-10-2018 IPR036629 YjbJ superfamily PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 SUPERFAMILY SSF69349 442 493 1.41E-9 T 12-10-2018 PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 Gene3D G3DSA:3.55.50.10 96 187 1.3E-79 T 12-10-2018 PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 615 759 5.1E-49 T 12-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 SUPERFAMILY SSF69279 197 365 8.16E-32 T 12-10-2018 PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 475 581 7.0E-34 T 12-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 Gene3D G3DSA:3.30.1920.30 221 284 1.3E-79 T 12-10-2018 PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 Pfam PF05954 Phage late control gene D protein (GPD) 27 327 2.8E-75 T 12-10-2018 PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 502 9.5E-121 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 SUPERFAMILY SSF69279 9 182 1.53E-47 T 12-10-2018 PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 SUPERFAMILY SSF69255 364 451 9.94E-34 T 12-10-2018 PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 Gene3D G3DSA:2.30.110.50 21 328 1.3E-79 T 12-10-2018 PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 Gene3D G3DSA:2.40.50.230 358 456 1.8E-41 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_0295 205461a87c710a76a81ffff4bcf4057b 832 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 493 8.8E-161 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_4261 7e22598dea976cf59578fd2d91548424 1162 SMART SM00968 520 615 6.9E-10 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 PA257_4261 7e22598dea976cf59578fd2d91548424 1162 Gene3D G3DSA:3.40.50.300 889 1161 3.3E-48 T 12-10-2018 PA257_4261 7e22598dea976cf59578fd2d91548424 1162 Gene3D G3DSA:3.40.50.300 1 251 6.1E-56 T 12-10-2018 PA257_4261 7e22598dea976cf59578fd2d91548424 1162 SUPERFAMILY SSF52540 1 1138 1.46E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4261 7e22598dea976cf59578fd2d91548424 1162 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1146 4.8E-68 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal PA257_4261 7e22598dea976cf59578fd2d91548424 1162 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1153 0.0 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 PA257_4261 7e22598dea976cf59578fd2d91548424 1162 PIRSF PIRSF005719 1 1162 6.4E-267 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein PA257_4261 7e22598dea976cf59578fd2d91548424 1162 SUPERFAMILY SSF75553 469 662 1.83E-6 T 12-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 PA257_4261 7e22598dea976cf59578fd2d91548424 1162 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1155 23.398 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 PA257_5013 419a6dbe0647294207db5eaf93dd90c3 161 Gene3D G3DSA:2.40.10.330 71 122 3.7E-57 T 12-10-2018 PA257_5013 419a6dbe0647294207db5eaf93dd90c3 161 SUPERFAMILY SSF54534 2 141 1.12E-36 T 12-10-2018 PA257_5013 419a6dbe0647294207db5eaf93dd90c3 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 8.8E-11 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PA257_5013 419a6dbe0647294207db5eaf93dd90c3 161 Gene3D G3DSA:3.10.50.40 3 155 3.7E-57 T 12-10-2018 PA257_1265 3349d623d3e4a29f7d10c0fbea2ef39b 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_1265 3349d623d3e4a29f7d10c0fbea2ef39b 296 SMART SM00342 207 290 6.5E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1265 3349d623d3e4a29f7d10c0fbea2ef39b 296 Gene3D G3DSA:1.10.10.60 189 295 1.0E-32 T 12-10-2018 PA257_1265 3349d623d3e4a29f7d10c0fbea2ef39b 296 Pfam PF12833 Helix-turn-helix domain 213 291 4.2E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1265 3349d623d3e4a29f7d10c0fbea2ef39b 296 SUPERFAMILY SSF46689 243 292 6.72E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1265 3349d623d3e4a29f7d10c0fbea2ef39b 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 1.8E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_1265 3349d623d3e4a29f7d10c0fbea2ef39b 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 1.8E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_1265 3349d623d3e4a29f7d10c0fbea2ef39b 296 SUPERFAMILY SSF46689 194 241 2.73E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 448 2.0E-199 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 10 34 2.8E-94 T 12-10-2018 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 121 138 2.8E-94 T 12-10-2018 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 171 195 2.8E-94 T 12-10-2018 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 80 108 2.8E-94 T 12-10-2018 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 210 238 2.8E-94 T 12-10-2018 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 319 342 2.8E-94 T 12-10-2018 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 245 271 2.8E-94 T 12-10-2018 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 SUPERFAMILY SSF52540 66 286 2.01E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 Gene3D G3DSA:3.30.230.10 325 453 2.4E-17 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 SUPERFAMILY SSF54211 252 452 2.73E-40 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 Hamap MF_01498 DNA repair protein RadA [radA]. 21 452 43.918 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 Pfam PF13541 Subunit ChlI of Mg-chelatase 364 427 5.5E-7 T 12-10-2018 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 SMART SM00382 88 241 2.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 Pfam PF13481 AAA domain 76 219 1.2E-13 T 12-10-2018 PA257_5790 c98abf70e7bbddeb3967dd78a281e90c 453 Gene3D G3DSA:3.40.50.300 63 276 2.7E-42 T 12-10-2018 PA257_6967 effd85c900a7298e9b23fb905aeb499c 290 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 204 7.1E-64 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 PA257_6967 effd85c900a7298e9b23fb905aeb499c 290 Gene3D G3DSA:3.90.1530.30 50 113 1.2E-28 T 12-10-2018 PA257_6967 effd85c900a7298e9b23fb905aeb499c 290 Pfam PF02195 ParB-like nuclease domain 38 127 4.0E-30 T 12-10-2018 IPR003115 ParB/Sulfiredoxin PA257_6967 effd85c900a7298e9b23fb905aeb499c 290 Gene3D G3DSA:1.10.10.2830 114 227 1.0E-38 T 12-10-2018 PA257_6967 effd85c900a7298e9b23fb905aeb499c 290 SMART SM00470 37 127 5.3E-39 T 12-10-2018 IPR003115 ParB/Sulfiredoxin PA257_6967 effd85c900a7298e9b23fb905aeb499c 290 SUPERFAMILY SSF110849 36 180 1.2E-34 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PA257_1966 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 SUPERFAMILY SSF53649 237 532 8.34E-20 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_1966 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 Pfam PF00884 Sulfatase 240 529 2.6E-54 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PA257_1966 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 Gene3D G3DSA:3.40.720.10 222 548 1.1E-89 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_1966 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 Pfam PF08019 Domain of unknown function (DUF1705) 59 209 7.6E-49 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 PA257_5484 da32671baca46154d92bd53fed7cb036 487 Gene3D G3DSA:3.90.190.20 330 484 9.7E-55 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_5484 da32671baca46154d92bd53fed7cb036 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 479 35.031 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 PA257_5484 da32671baca46154d92bd53fed7cb036 487 Pfam PF01225 Mur ligase family, catalytic domain 18 94 6.1E-12 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PA257_5484 da32671baca46154d92bd53fed7cb036 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 17 479 2.2E-155 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 PA257_5484 da32671baca46154d92bd53fed7cb036 487 SUPERFAMILY SSF63418 11 95 6.28E-21 T 12-10-2018 IPR035911 MurE/MurF, N-terminal PA257_5484 da32671baca46154d92bd53fed7cb036 487 Pfam PF08245 Mur ligase middle domain 106 306 2.3E-51 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PA257_5484 da32671baca46154d92bd53fed7cb036 487 Gene3D G3DSA:3.40.1190.10 97 329 5.6E-80 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_5484 da32671baca46154d92bd53fed7cb036 487 SUPERFAMILY SSF53623 97 326 6.41E-77 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_5484 da32671baca46154d92bd53fed7cb036 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 412 4.8E-22 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PA257_5484 da32671baca46154d92bd53fed7cb036 487 Gene3D G3DSA:3.40.1390.10 3 96 5.5E-23 T 12-10-2018 PA257_5484 da32671baca46154d92bd53fed7cb036 487 SUPERFAMILY SSF53244 329 480 5.95E-47 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_5242 8f2acb25af98c46979a3ac9b8e88c44a 186 Gene3D G3DSA:3.40.50.1390 5 127 2.2E-40 T 12-10-2018 PA257_5242 8f2acb25af98c46979a3ac9b8e88c44a 186 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PA257_5242 8f2acb25af98c46979a3ac9b8e88c44a 186 SMART SM00857 5 139 8.1E-49 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_5242 8f2acb25af98c46979a3ac9b8e88c44a 186 Gene3D G3DSA:1.10.10.60 141 186 3.0E-5 T 12-10-2018 PA257_5242 8f2acb25af98c46979a3ac9b8e88c44a 186 SUPERFAMILY SSF53041 6 139 9.16E-41 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PA257_5242 8f2acb25af98c46979a3ac9b8e88c44a 186 Pfam PF02796 Helix-turn-helix domain of resolvase 141 184 3.9E-14 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 PA257_5242 8f2acb25af98c46979a3ac9b8e88c44a 186 Pfam PF00239 Resolvase, N terminal domain 6 139 7.3E-40 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_5242 8f2acb25af98c46979a3ac9b8e88c44a 186 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PA257_5242 8f2acb25af98c46979a3ac9b8e88c44a 186 SUPERFAMILY SSF46689 141 183 1.03E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2355 2bc4dcec2dafa431f0e2d3394902314f 309 Pfam PF01012 Electron transfer flavoprotein domain 4 169 2.3E-39 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PA257_2355 2bc4dcec2dafa431f0e2d3394902314f 309 SUPERFAMILY SSF52467 187 308 1.45E-48 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_2355 2bc4dcec2dafa431f0e2d3394902314f 309 Gene3D G3DSA:3.40.50.1220 184 309 6.0E-58 T 12-10-2018 PA257_2355 2bc4dcec2dafa431f0e2d3394902314f 309 Gene3D G3DSA:3.40.50.620 2 183 8.4E-56 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2355 2bc4dcec2dafa431f0e2d3394902314f 309 PIRSF PIRSF000089 1 309 3.3E-106 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 PA257_2355 2bc4dcec2dafa431f0e2d3394902314f 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 7.0E-37 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 PA257_2355 2bc4dcec2dafa431f0e2d3394902314f 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 PA257_2355 2bc4dcec2dafa431f0e2d3394902314f 309 SUPERFAMILY SSF52402 3 184 1.34E-56 T 12-10-2018 PA257_2355 2bc4dcec2dafa431f0e2d3394902314f 309 SMART SM00893 3 182 2.8E-55 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PA257_3049 e4e3e6599580022b9717e352cd3322a9 428 SUPERFAMILY SSF56954 11 422 8.63E-80 T 12-10-2018 PA257_3049 e4e3e6599580022b9717e352cd3322a9 428 Pfam PF02321 Outer membrane efflux protein 43 213 6.8E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_3049 e4e3e6599580022b9717e352cd3322a9 428 Pfam PF02321 Outer membrane efflux protein 246 420 4.6E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_3049 e4e3e6599580022b9717e352cd3322a9 428 Gene3D G3DSA:1.20.1600.10 31 424 3.4E-70 T 12-10-2018 PA257_0247 1b8e9d25eddef58dab957b2ee7d94c94 477 PIRSF PIRSF006060 2 472 1.3E-81 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_0247 1b8e9d25eddef58dab957b2ee7d94c94 477 Gene3D G3DSA:1.20.1740.10 11 448 2.0E-60 T 12-10-2018 PA257_0247 1b8e9d25eddef58dab957b2ee7d94c94 477 Pfam PF13520 Amino acid permease 21 411 2.3E-38 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_6929 3cdb7f519f46d2de945a2382f6694058 133 SUPERFAMILY SSF160631 2 132 2.49E-42 T 12-10-2018 PA257_6929 3cdb7f519f46d2de945a2382f6694058 133 Gene3D G3DSA:3.40.1580.10 1 133 7.5E-40 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily PA257_6929 3cdb7f519f46d2de945a2382f6694058 133 Pfam PF14567 SMI1-KNR4 cell-wall 2 131 1.3E-42 T 12-10-2018 PA257_6929 3cdb7f519f46d2de945a2382f6694058 133 SMART SM00860 21 128 0.0026 T 12-10-2018 IPR018958 Knr4/Smi1-like domain PA257_5780 682e56cd29a54aeb5a218dcdb40801d3 187 Gene3D G3DSA:1.10.357.10 5 185 5.8E-28 T 12-10-2018 PA257_5780 682e56cd29a54aeb5a218dcdb40801d3 187 SUPERFAMILY SSF46689 23 79 2.84E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5780 682e56cd29a54aeb5a218dcdb40801d3 187 ProSitePatterns PS00356 LacI-type HTH domain signature. 26 44 - T 12-10-2018 PA257_5780 682e56cd29a54aeb5a218dcdb40801d3 187 SUPERFAMILY SSF48498 81 172 1.13E-12 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_3297 eebb2ba6588c893fb7582e64401fdfbf 405 Gene3D G3DSA:1.20.140.10 230 402 8.7E-58 T 12-10-2018 PA257_3297 eebb2ba6588c893fb7582e64401fdfbf 405 SUPERFAMILY SSF47203 233 399 1.93E-26 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_3297 eebb2ba6588c893fb7582e64401fdfbf 405 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 248 380 3.1E-20 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PA257_3297 eebb2ba6588c893fb7582e64401fdfbf 405 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 27 128 1.6E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_3297 eebb2ba6588c893fb7582e64401fdfbf 405 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 15 404 3.2E-197 T 12-10-2018 IPR023922 Sulphate-starvation-induced SfnB PA257_3297 eebb2ba6588c893fb7582e64401fdfbf 405 PIRSF PIRSF016578 7 396 3.2E-30 T 12-10-2018 PA257_3297 eebb2ba6588c893fb7582e64401fdfbf 405 Gene3D G3DSA:1.10.540.10 22 130 8.3E-23 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_3297 eebb2ba6588c893fb7582e64401fdfbf 405 Gene3D G3DSA:2.40.110.10 131 229 5.7E-30 T 12-10-2018 PA257_3297 eebb2ba6588c893fb7582e64401fdfbf 405 SUPERFAMILY SSF56645 27 229 2.75E-48 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_0400 6506f1ab84ac01c01c6b98729543ad46 110 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 3.2E-19 T 12-10-2018 IPR010879 Domain of unknown function DUF1508 PA257_0400 6506f1ab84ac01c01c6b98729543ad46 110 Pfam PF07411 Domain of unknown function (DUF1508) 10 53 1.7E-18 T 12-10-2018 IPR010879 Domain of unknown function DUF1508 PA257_0400 6506f1ab84ac01c01c6b98729543ad46 110 SUPERFAMILY SSF160113 1 54 1.24E-16 T 12-10-2018 IPR036913 YegP-like superfamily PA257_0400 6506f1ab84ac01c01c6b98729543ad46 110 Gene3D G3DSA:2.30.29.80 1 110 5.5E-41 T 12-10-2018 PA257_0400 6506f1ab84ac01c01c6b98729543ad46 110 SUPERFAMILY SSF160113 54 107 1.96E-15 T 12-10-2018 IPR036913 YegP-like superfamily PA257_1737 3a2fea79c4a65815e0ffee9d7146b091 474 Gene3D G3DSA:2.60.120.1380 346 463 2.1E-51 T 12-10-2018 IPR038639 AlgX, C-terminal domain superfamily PA257_1737 3a2fea79c4a65815e0ffee9d7146b091 474 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 64 325 2.1E-84 T 12-10-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain PA257_1737 3a2fea79c4a65815e0ffee9d7146b091 474 Pfam PF16824 C-terminal carbohydrate-binding module 346 465 2.2E-57 T 12-10-2018 IPR031798 Alginate biosynthesis protein AlgX, C-terminal carbohydrate-binding module PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 SUPERFAMILY SSF64484 16 1363 0.0 T 12-10-2018 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 342 2.4E-90 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 14 1387 19.056 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:1.10.1790.20 1135 1314 1.0E-61 T 12-10-2018 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:1.10.132.30 641 790 1.3E-65 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.50.100 948 1022 1.6E-26 T 12-10-2018 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 SMART SM00663 235 514 5.7E-185 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 2.5E-28 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 381 2.2E-7 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.50.100 1023 1126 4.8E-28 T 12-10-2018 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:1.10.150.390 1316 1375 9.8E-28 T 12-10-2018 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:1.10.40.90 374 416 6.5E-21 T 12-10-2018 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 643 4.9E-30 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:1.10.274.100 490 640 5.9E-41 T 12-10-2018 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.4E-20 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.50.100 1151 1215 1.0E-61 T 12-10-2018 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1316 2.6E-77 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0826 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0404 d9a8e76603764866504d9eb80c487b6a 423 Gene3D G3DSA:3.40.50.720 2 293 6.5E-39 T 12-10-2018 PA257_0404 d9a8e76603764866504d9eb80c487b6a 423 SUPERFAMILY SSF51735 1 259 3.72E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0404 d9a8e76603764866504d9eb80c487b6a 423 Pfam PF13781 DoxX-like family 308 409 1.6E-23 T 12-10-2018 IPR025695 DoxX-like family PA257_0404 d9a8e76603764866504d9eb80c487b6a 423 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 192 5.8E-9 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_5163 df7e54aaba7d81798a9b2786f779de76 502 Pfam PF00171 Aldehyde dehydrogenase family 13 477 1.1E-138 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_5163 df7e54aaba7d81798a9b2786f779de76 502 Gene3D G3DSA:3.40.309.10 250 450 2.6E-143 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_5163 df7e54aaba7d81798a9b2786f779de76 502 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 7 481 5.9E-237 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 PA257_5163 df7e54aaba7d81798a9b2786f779de76 502 SUPERFAMILY SSF53720 4 483 3.27E-147 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_5163 df7e54aaba7d81798a9b2786f779de76 502 Gene3D G3DSA:3.40.605.10 24 458 2.6E-143 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_1756 c215aefc354b29767ec74f0847081903 348 PIRSF PIRSF001237 1 346 2.7E-140 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_1756 c215aefc354b29767ec74f0847081903 348 SUPERFAMILY SSF51556 3 343 6.43E-147 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_1756 c215aefc354b29767ec74f0847081903 348 Gene3D G3DSA:3.20.20.140 4 344 4.2E-108 T 12-10-2018 PA257_1756 c215aefc354b29767ec74f0847081903 348 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 47.393 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_1756 c215aefc354b29767ec74f0847081903 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 3.0E-141 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_1756 c215aefc354b29767ec74f0847081903 348 Pfam PF01979 Amidohydrolase family 12 310 4.5E-14 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_1756 c215aefc354b29767ec74f0847081903 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_1756 c215aefc354b29767ec74f0847081903 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Gene3D G3DSA:3.30.300.30 909 998 7.2E-12 T 12-10-2018 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Gene3D G3DSA:1.10.10.1830 2 54 2.2E-12 T 12-10-2018 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Gene3D G3DSA:3.30.559.10 64 245 3.4E-47 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 SUPERFAMILY SSF52777 250 492 1.56E-41 T 12-10-2018 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 SUPERFAMILY SSF56801 505 1425 1.95E-132 T 12-10-2018 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 PRINTS PR00154 AMP-binding signature 664 672 5.8E-5 T 12-10-2018 IPR020459 AMP-binding PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 PRINTS PR00154 AMP-binding signature 652 663 5.8E-5 T 12-10-2018 IPR020459 AMP-binding PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 SUPERFAMILY SSF52777 66 262 6.45E-18 T 12-10-2018 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 ProSitePatterns PS00455 Putative AMP-binding domain signature. 657 668 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 SUPERFAMILY SSF47336 1407 1484 7.33E-12 T 12-10-2018 IPR036736 ACP-like superfamily PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Gene3D G3DSA:1.10.1200.10 1403 1492 1.5E-18 T 12-10-2018 IPR036736 ACP-like superfamily PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 541 938 2.1E-117 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Pfam PF08242 Methyltransferase domain 1162 1267 7.2E-9 T 12-10-2018 IPR013217 Methyltransferase type 12 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Pfam PF00501 AMP-binding enzyme 520 915 1.7E-89 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Pfam PF00668 Condensation domain 69 415 2.7E-24 T 12-10-2018 IPR001242 Condensation domain PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1437 1452 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Gene3D G3DSA:3.40.50.150 1112 1316 2.0E-31 T 12-10-2018 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Gene3D G3DSA:3.30.300.30 1317 1393 3.6E-10 T 12-10-2018 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Gene3D G3DSA:3.30.559.30 248 497 6.0E-78 T 12-10-2018 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Pfam PF00550 Phosphopantetheine attachment site 1415 1458 2.7E-7 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 SUPERFAMILY SSF53474 1520 1798 1.79E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 Gene3D G3DSA:3.40.50.12780 511 907 6.6E-116 T 12-10-2018 PA257_0870 13da7c4a2c4873947a52913abd52b272 1809 SUPERFAMILY SSF53335 1133 1315 1.03E-15 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1149 d26fd1278364cd248ecc39fafeb99043 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 3.6E-47 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 PA257_1149 d26fd1278364cd248ecc39fafeb99043 155 PIRSF PIRSF004505 1 155 7.8E-42 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 PA257_1149 d26fd1278364cd248ecc39fafeb99043 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 4.4E-61 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 PA257_1149 d26fd1278364cd248ecc39fafeb99043 155 Gene3D G3DSA:3.40.1280.10 1 155 9.5E-49 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PA257_1149 d26fd1278364cd248ecc39fafeb99043 155 SUPERFAMILY SSF75217 1 154 1.1E-47 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases PA257_1149 d26fd1278364cd248ecc39fafeb99043 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.112 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 PA257_1669 7216fd3cc77ea6617415e8ac2f50528d 297 SUPERFAMILY SSF103481 41 144 1.09E-8 T 12-10-2018 PA257_1669 7216fd3cc77ea6617415e8ac2f50528d 297 Pfam PF00892 EamA-like transporter family 8 141 6.8E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_1669 7216fd3cc77ea6617415e8ac2f50528d 297 Pfam PF00892 EamA-like transporter family 150 282 1.5E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_1669 7216fd3cc77ea6617415e8ac2f50528d 297 SUPERFAMILY SSF103481 191 288 6.41E-12 T 12-10-2018 PA257_0190 a2cd8104e0a1cecdcefacf1ba988ce77 263 SMART SM00342 178 260 9.7E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0190 a2cd8104e0a1cecdcefacf1ba988ce77 263 Gene3D G3DSA:1.10.10.60 163 263 1.3E-19 T 12-10-2018 PA257_0190 a2cd8104e0a1cecdcefacf1ba988ce77 263 Pfam PF12833 Helix-turn-helix domain 184 261 8.6E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0190 a2cd8104e0a1cecdcefacf1ba988ce77 263 Pfam PF02311 AraC-like ligand binding domain 35 128 3.4E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_0190 a2cd8104e0a1cecdcefacf1ba988ce77 263 SUPERFAMILY SSF51182 10 187 8.0E-18 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_0190 a2cd8104e0a1cecdcefacf1ba988ce77 263 Gene3D G3DSA:2.60.120.10 17 95 1.1E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_0190 a2cd8104e0a1cecdcefacf1ba988ce77 263 SUPERFAMILY SSF46689 215 261 2.42E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3814 c637e29f87243848c0f63d5aa7629cb8 766 PIRSF PIRSF000382 1 765 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PA257_3814 c637e29f87243848c0f63d5aa7629cb8 766 Gene3D G3DSA:3.20.20.210 6 528 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PA257_3814 c637e29f87243848c0f63d5aa7629cb8 766 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 317 2.9E-118 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PA257_3814 c637e29f87243848c0f63d5aa7629cb8 766 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 760 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PA257_3814 c637e29f87243848c0f63d5aa7629cb8 766 SUPERFAMILY SSF51726 3 398 6.93E-116 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PA257_3814 c637e29f87243848c0f63d5aa7629cb8 766 SUPERFAMILY SSF51726 400 761 1.83E-120 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PA257_3814 c637e29f87243848c0f63d5aa7629cb8 766 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 435 757 6.7E-154 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PA257_3814 c637e29f87243848c0f63d5aa7629cb8 766 Gene3D G3DSA:3.20.20.210 393 760 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PA257_3814 c637e29f87243848c0f63d5aa7629cb8 766 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 762 37.558 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PA257_2369 970bab4bb1532ed737979dce7dfbfb87 379 Gene3D G3DSA:3.40.47.10 140 372 3.4E-132 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2369 970bab4bb1532ed737979dce7dfbfb87 379 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 376 1.1E-123 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_2369 970bab4bb1532ed737979dce7dfbfb87 379 Gene3D G3DSA:3.40.47.10 7 261 3.4E-132 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2369 970bab4bb1532ed737979dce7dfbfb87 379 SUPERFAMILY SSF53901 257 376 8.35E-43 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2369 970bab4bb1532ed737979dce7dfbfb87 379 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PA257_2369 970bab4bb1532ed737979dce7dfbfb87 379 SUPERFAMILY SSF53901 5 253 4.01E-66 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2369 970bab4bb1532ed737979dce7dfbfb87 379 Pfam PF00108 Thiolase, N-terminal domain 6 248 3.4E-59 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_2369 970bab4bb1532ed737979dce7dfbfb87 379 Pfam PF02803 Thiolase, C-terminal domain 256 376 5.8E-45 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_2369 970bab4bb1532ed737979dce7dfbfb87 379 PIRSF PIRSF000429 1 379 2.3E-116 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_2369 970bab4bb1532ed737979dce7dfbfb87 379 ProSitePatterns PS00737 Thiolases signature 2. 324 340 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 Gene3D G3DSA:2.130.10.120 65 404 8.6E-240 T 12-10-2018 PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 SUPERFAMILY SSF50993 2 410 9.94E-85 T 12-10-2018 PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 SUPERFAMILY SSF53474 417 660 1.52E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 Pfam PF00326 Prolyl oligopeptidase family 466 681 2.9E-69 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 12 402 3.2E-76 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 Gene3D G3DSA:3.40.50.1820 16 676 8.6E-240 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 534 554 1.7E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 450 468 1.7E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 504 523 1.7E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 592 607 1.7E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 476 500 1.7E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PA257_4493 54d4448b3f5d2eea17eaca5d66cfadf6 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 610 632 1.7E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PA257_4540 770ef9bf5ab7a494aacabdbde4c94667 578 Pfam PF01989 Protein of unknown function DUF126 28 103 3.3E-29 T 12-10-2018 IPR002840 Aconitase X swivel domain, putative PA257_4540 770ef9bf5ab7a494aacabdbde4c94667 578 Pfam PF04412 Protein of unknown function (DUF521) 161 559 2.3E-148 T 12-10-2018 IPR007506 Aconitase X catalytic domain, putative PA257_4540 770ef9bf5ab7a494aacabdbde4c94667 578 SUPERFAMILY SSF53732 437 533 4.71E-6 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 PA257_4540 770ef9bf5ab7a494aacabdbde4c94667 578 SUPERFAMILY SSF52016 7 114 9.42E-34 T 12-10-2018 PA257_4540 770ef9bf5ab7a494aacabdbde4c94667 578 Gene3D G3DSA:3.30.499.10 434 558 8.8E-7 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 PA257_4540 770ef9bf5ab7a494aacabdbde4c94667 578 PIRSF PIRSF036630 3 578 2.7E-289 T 12-10-2018 IPR012047 Aconitase X PA257_4540 770ef9bf5ab7a494aacabdbde4c94667 578 Gene3D G3DSA:3.50.30.10 7 134 2.9E-32 T 12-10-2018 PA257_4733 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Pfam PF00700 Bacterial flagellin C-terminal helical region 352 432 4.5E-7 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PA257_4733 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Gene3D G3DSA:1.20.1330.10 295 409 1.1E-11 T 12-10-2018 PA257_4733 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.9E-21 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PA257_4733 7b5b0bad8c7ebd6e785ba670aafaacc7 433 SUPERFAMILY SSF64518 1 433 5.49E-82 T 12-10-2018 PA257_4733 7b5b0bad8c7ebd6e785ba670aafaacc7 433 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 432 5.2E-114 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 PA257_4733 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Gene3D G3DSA:1.20.1330.10 40 214 4.2E-48 T 12-10-2018 PA257_4620 a81cee09e4cad69d875003fc3a94746f 339 Gene3D G3DSA:3.20.20.30 8 329 6.0E-95 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_4620 a81cee09e4cad69d875003fc3a94746f 339 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 18 326 3.6E-120 T 12-10-2018 IPR020020 Luciferase-type oxidoreductase PA257_4620 a81cee09e4cad69d875003fc3a94746f 339 Pfam PF00296 Luciferase-like monooxygenase 31 227 3.2E-37 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_4620 a81cee09e4cad69d875003fc3a94746f 339 SUPERFAMILY SSF51679 28 326 3.83E-56 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_2184 2e30c2d5c9631d388c045bab24554d90 334 Gene3D G3DSA:3.90.226.10 71 331 2.2E-85 T 12-10-2018 PA257_2184 2e30c2d5c9631d388c045bab24554d90 334 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 209 227 1.1E-37 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_2184 2e30c2d5c9631d388c045bab24554d90 334 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 246 263 1.1E-37 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_2184 2e30c2d5c9631d388c045bab24554d90 334 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 175 189 1.1E-37 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_2184 2e30c2d5c9631d388c045bab24554d90 334 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 297 306 1.1E-37 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_2184 2e30c2d5c9631d388c045bab24554d90 334 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 275 286 1.1E-37 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_2184 2e30c2d5c9631d388c045bab24554d90 334 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 58 330 9.5E-133 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_2184 2e30c2d5c9631d388c045bab24554d90 334 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 46 327 37.994 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_2184 2e30c2d5c9631d388c045bab24554d90 334 Pfam PF01039 Carboxyl transferase domain 142 286 6.3E-17 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PA257_2184 2e30c2d5c9631d388c045bab24554d90 334 SUPERFAMILY SSF52096 71 329 1.09E-87 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_2084 1277b04767678c69c862e28af3fb5763 264 SMART SM00382 34 223 3.5E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2084 1277b04767678c69c862e28af3fb5763 264 Gene3D G3DSA:3.40.50.300 7 261 2.4E-64 T 12-10-2018 PA257_2084 1277b04767678c69c862e28af3fb5763 264 SUPERFAMILY SSF52540 9 236 4.33E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2084 1277b04767678c69c862e28af3fb5763 264 Pfam PF00005 ABC transporter 27 175 1.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_2084 1277b04767678c69c862e28af3fb5763 264 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2039 b986a04cf5f681245341bacedd089806 352 SUPERFAMILY SSF53850 36 345 6.73E-52 T 12-10-2018 PA257_2039 b986a04cf5f681245341bacedd089806 352 Gene3D G3DSA:3.40.190.10 53 302 1.8E-37 T 12-10-2018 PA257_2039 b986a04cf5f681245341bacedd089806 352 Pfam PF13343 Bacterial extracellular solute-binding protein 89 313 1.3E-34 T 12-10-2018 PA257_2039 b986a04cf5f681245341bacedd089806 352 Gene3D G3DSA:3.40.190.10 140 256 1.8E-37 T 12-10-2018 PA257_6944 6df6770831c6ca72eee31637ba122163 298 Pfam PF02649 Type I GTP cyclohydrolase folE2 6 289 3.8E-68 T 12-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 PA257_6944 6df6770831c6ca72eee31637ba122163 298 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 6 294 32.619 T 12-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 PA257_1549 7338882a7fc594ae09a398ba40123f50 307 Gene3D G3DSA:3.40.50.300 1 233 4.9E-61 T 12-10-2018 PA257_1549 7338882a7fc594ae09a398ba40123f50 307 Pfam PF00005 ABC transporter 18 160 1.2E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1549 7338882a7fc594ae09a398ba40123f50 307 SMART SM00382 26 216 3.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1549 7338882a7fc594ae09a398ba40123f50 307 SUPERFAMILY SSF52540 2 229 4.13E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4751 8d747360fbc9aafe721718c73b011817 233 PIRSF PIRSF039137 1 233 3.7E-104 T 12-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 PA257_4751 8d747360fbc9aafe721718c73b011817 233 SUPERFAMILY SSF52540 2 231 2.02E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4751 8d747360fbc9aafe721718c73b011817 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4751 8d747360fbc9aafe721718c73b011817 233 SMART SM00382 26 212 3.9E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4751 8d747360fbc9aafe721718c73b011817 233 Gene3D G3DSA:3.40.50.300 1 233 2.7E-66 T 12-10-2018 PA257_4751 8d747360fbc9aafe721718c73b011817 233 Pfam PF00005 ABC transporter 17 161 3.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4254 13cb6d4b99de632e187177daff6ff097 198 SMART SM00493 80 164 1.5E-14 T 12-10-2018 IPR006171 TOPRIM domain PA257_4254 13cb6d4b99de632e187177daff6ff097 198 Gene3D G3DSA:3.40.1360.10 77 197 1.2E-38 T 12-10-2018 PA257_4254 13cb6d4b99de632e187177daff6ff097 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 195 2.1E-72 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PA257_4254 13cb6d4b99de632e187177daff6ff097 198 Pfam PF13662 Toprim domain 81 170 9.6E-24 T 12-10-2018 IPR006171 TOPRIM domain PA257_4254 13cb6d4b99de632e187177daff6ff097 198 Gene3D G3DSA:1.10.8.420 1 52 2.3E-16 T 12-10-2018 PA257_4254 13cb6d4b99de632e187177daff6ff097 198 Pfam PF02132 RecR protein 41 78 2.3E-16 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger PA257_4254 13cb6d4b99de632e187177daff6ff097 198 SUPERFAMILY SSF111304 3 197 4.45E-70 T 12-10-2018 IPR023627 Recombination protein RecR PA257_4254 13cb6d4b99de632e187177daff6ff097 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 PA257_4254 13cb6d4b99de632e187177daff6ff097 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 101.113 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PA257_4379 48b6d87743be6484cbdb6b9c5cb8efb4 242 Gene3D G3DSA:3.60.15.10 3 237 1.4E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_4379 48b6d87743be6484cbdb6b9c5cb8efb4 242 SUPERFAMILY SSF56281 15 233 3.64E-42 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_4379 48b6d87743be6484cbdb6b9c5cb8efb4 242 Pfam PF00753 Metallo-beta-lactamase superfamily 29 220 8.0E-22 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_4379 48b6d87743be6484cbdb6b9c5cb8efb4 242 SMART SM00849 32 220 3.1E-32 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_1979 53ce23086a721be2f9a386ba71f9a370 316 Pfam PF12146 Serine aminopeptidase, S33 27 288 1.4E-68 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 PA257_1979 53ce23086a721be2f9a386ba71f9a370 316 PIRSF PIRSF037442 1 305 1.6E-42 T 12-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 PA257_1979 53ce23086a721be2f9a386ba71f9a370 316 SUPERFAMILY SSF53474 6 305 5.71E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1979 53ce23086a721be2f9a386ba71f9a370 316 Gene3D G3DSA:3.40.50.1820 3 310 1.0E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Pfam PF03144 Elongation factor Tu domain 2 331 398 7.1E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 SUPERFAMILY SSF50447 271 411 5.52E-35 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Gene3D G3DSA:3.30.230.10 491 616 5.9E-51 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 SMART SM00889 487 612 1.3E-66 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 7.8E-65 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Pfam PF14492 Elongation Factor G, domain II 411 485 2.4E-35 T 12-10-2018 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Pfam PF03764 Elongation factor G, domain IV 486 611 7.7E-42 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Pfam PF00679 Elongation factor G C-terminus 615 699 1.2E-30 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 705 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 5.1E-33 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 SUPERFAMILY SSF54980 617 703 2.78E-29 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 PRINTS PR00315 GTP-binding elongation factor signature 12 25 6.6E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.6E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 SUPERFAMILY SSF54980 411 488 1.22E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 SUPERFAMILY SSF54211 486 612 8.09E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Gene3D G3DSA:2.40.30.10 294 407 7.5E-48 T 12-10-2018 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 SUPERFAMILY SSF52540 6 287 9.06E-104 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Gene3D G3DSA:3.30.70.240 617 705 2.5E-34 T 12-10-2018 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 SMART SM00838 614 701 7.2E-55 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Gene3D G3DSA:3.40.50.300 1 293 4.1E-115 T 12-10-2018 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Gene3D G3DSA:3.30.70.870 412 490 7.7E-34 T 12-10-2018 PA257_0829 def477d94a366c4df30b12f5fcfb5a61 706 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 110.118 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 Pfam PF02913 FAD linked oxidases, C-terminal domain 267 514 1.8E-62 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 SUPERFAMILY SSF46548 492 620 1.69E-20 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 SUPERFAMILY SSF56176 7 264 7.36E-58 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 Pfam PF12838 4Fe-4S dicluster domain 539 608 2.6E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 SUPERFAMILY SSF55103 269 521 6.05E-58 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 Pfam PF02754 Cysteine-rich domain 833 893 0.011 T 12-10-2018 IPR004017 Cysteine-rich domain PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 Pfam PF02754 Cysteine-rich domain 704 795 0.0058 T 12-10-2018 IPR004017 Cysteine-rich domain PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 Pfam PF01565 FAD binding domain 41 175 4.2E-33 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 540 551 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 Gene3D G3DSA:1.10.1060.10 517 629 5.8E-8 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 Gene3D G3DSA:3.30.70.2740 392 475 7.6E-8 T 12-10-2018 PA257_5991 dc64dda6a5c2cd56ae3cc4169742f867 938 Gene3D G3DSA:3.30.465.40 7 195 9.8E-30 T 12-10-2018 PA257_2465 284974cd068513ada02526581ac02520 318 Gene3D G3DSA:3.40.190.10 94 298 2.1E-52 T 12-10-2018 PA257_2465 284974cd068513ada02526581ac02520 318 SUPERFAMILY SSF46785 10 115 5.84E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2465 284974cd068513ada02526581ac02520 318 Gene3D G3DSA:1.10.10.10 5 89 1.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2465 284974cd068513ada02526581ac02520 318 SUPERFAMILY SSF53850 93 302 1.45E-37 T 12-10-2018 PA257_2465 284974cd068513ada02526581ac02520 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 2.9E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2465 284974cd068513ada02526581ac02520 318 Gene3D G3DSA:3.40.190.10 169 271 2.1E-52 T 12-10-2018 PA257_2465 284974cd068513ada02526581ac02520 318 Pfam PF03466 LysR substrate binding domain 92 301 8.7E-36 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_5756 7717c2aa6e1febbc919bff18f288e17c 180 Pfam PF08719 Domain of unknown function (DUF1768) 21 178 2.3E-52 T 12-10-2018 IPR012816 NADAR PA257_5756 7717c2aa6e1febbc919bff18f288e17c 180 Gene3D G3DSA:1.10.357.40 20 180 1.1E-42 T 12-10-2018 IPR037238 YbiA-like superfamily PA257_5756 7717c2aa6e1febbc919bff18f288e17c 180 SUPERFAMILY SSF143990 15 179 1.44E-50 T 12-10-2018 IPR037238 YbiA-like superfamily PA257_5756 7717c2aa6e1febbc919bff18f288e17c 180 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 19 178 1.3E-49 T 12-10-2018 IPR012816 NADAR PA257_3794 f1c15c935122296d21b9d1c9b202b9b6 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 318 1.0E-47 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF13193 AMP-binding enzyme C-terminal domain 1539 1616 2.4E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF13193 AMP-binding enzyme C-terminal domain 4136 4224 2.2E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF13193 AMP-binding enzyme C-terminal domain 2603 2683 2.4E-13 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.559.10 3253 3630 5.7E-131 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.300.30 4121 4239 1.1E-33 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.300.30 2588 2698 2.0E-35 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.300.30 1524 1630 8.6E-31 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1275 1286 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.559.30 1912 2159 5.5E-153 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF52777 2967 3216 1.45E-46 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:1.10.1200.10 1631 1713 5.1E-27 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.559.30 3432 3695 5.7E-131 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF56801 1094 1653 2.88E-159 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF52777 678 854 1.22E-50 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SMART SM00823 Phosphopantetheine attachment site 587 656 8.1E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SMART SM00823 Phosphopantetheine attachment site 4251 4320 9.4E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SMART SM00823 Phosphopantetheine attachment site 2709 2776 0.0081 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SMART SM00823 Phosphopantetheine attachment site 1640 1709 0.0045 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.559.10 1730 2103 5.5E-153 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF47336 1633 1705 1.57E-18 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.40.50.12780 9 448 7.1E-155 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.40.50.12780 3710 4120 1.2E-119 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.40.50.12780 2183 2587 3.6E-130 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.40.50.12780 1123 1523 1.0E-144 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF52777 862 1104 1.45E-52 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.559.10 2778 2951 9.8E-53 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00668 Condensation domain 1727 2174 9.2E-105 T 12-10-2018 IPR001242 Condensation domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00668 Condensation domain 2787 3217 1.9E-83 T 12-10-2018 IPR001242 Condensation domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00668 Condensation domain 675 1115 7.9E-98 T 12-10-2018 IPR001242 Condensation domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00668 Condensation domain 3248 3698 9.1E-91 T 12-10-2018 IPR001242 Condensation domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF56801 8 561 5.63E-118 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF56801 2154 2722 6.41E-154 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF52777 1731 1908 1.85E-52 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF52777 2783 2981 8.23E-41 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00550 Phosphopantetheine attachment site 4253 4316 8.6E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00550 Phosphopantetheine attachment site 589 651 2.1E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00550 Phosphopantetheine attachment site 1642 1704 4.7E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00550 Phosphopantetheine attachment site 2710 2771 2.5E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 ProSitePatterns PS00012 Phosphopantetheine attachment site. 611 626 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3087 3240 5.2E-48 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2336 2347 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2213 2619 2.5E-126 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1156 1555 3.7E-135 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3740 4152 9.2E-123 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.559.10 676 1044 1.3E-134 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3867 3878 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.559.30 858 1099 1.3E-134 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.559.30 2952 3218 4.2E-87 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:3.30.300.30 450 575 2.7E-36 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00501 AMP-binding enzyme 2192 2595 1.8E-90 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00501 AMP-binding enzyme 3719 4128 2.4E-84 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00501 AMP-binding enzyme 1134 1531 2.6E-102 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Pfam PF00501 AMP-binding enzyme 16 456 2.0E-88 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF47336 4243 4317 1.26E-20 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF52777 1914 2157 1.08E-61 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2733 2748 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF47336 581 687 8.51E-15 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF56801 3684 4264 5.23E-143 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF47336 2701 2771 4.32E-19 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4275 4290 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF52777 3431 3682 1.33E-51 T 12-10-2018 PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:1.10.1200.10 2699 2777 6.4E-26 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:1.10.1200.10 576 657 5.2E-18 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 Gene3D G3DSA:1.10.1200.10 4240 4319 1.1E-28 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3207 02617e1afc86fc50cb68b88f620d253e 4342 SUPERFAMILY SSF52777 3253 3430 4.11E-47 T 12-10-2018 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 SMART SM00388 798 864 1.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 SUPERFAMILY SSF55785 629 751 1.9E-9 T 12-10-2018 IPR035965 PAS domain superfamily PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 SMART SM00387 908 1018 2.2E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 Gene3D G3DSA:1.10.287.130 762 862 1.2E-18 T 12-10-2018 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 909 1017 5.6E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 Gene3D G3DSA:3.30.450.20 626 758 2.6E-11 T 12-10-2018 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 Gene3D G3DSA:1.20.1730.10 34 480 1.7E-17 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 Gene3D G3DSA:3.40.50.2300 1035 1159 1.5E-18 T 12-10-2018 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 978 996 6.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1002 1015 6.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 943 957 6.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 971 6.3E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 SUPERFAMILY SSF47384 781 865 3.53E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 Gene3D G3DSA:3.30.565.10 873 1021 7.2E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 Pfam PF00512 His Kinase A (phospho-acceptor) domain 798 864 2.0E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 SMART SM00448 1039 1152 9.5E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 SUPERFAMILY SSF52172 1037 1157 1.71E-20 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 Pfam PF12860 PAS fold 644 758 2.1E-45 T 12-10-2018 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 Pfam PF00072 Response regulator receiver domain 1041 1151 5.5E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2014 c50a04cb9586baa48dac84a101561eed 1159 SUPERFAMILY SSF55874 854 1017 2.1E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0908 28079186718dfaf404bf75731a310c55 340 Gene3D G3DSA:3.40.50.880 25 222 6.5E-43 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_0908 28079186718dfaf404bf75731a310c55 340 SUPERFAMILY SSF46689 232 282 1.16E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0908 28079186718dfaf404bf75731a310c55 340 Pfam PF01965 DJ-1/PfpI family 44 197 1.7E-17 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_0908 28079186718dfaf404bf75731a310c55 340 Pfam PF12833 Helix-turn-helix domain 254 329 2.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0908 28079186718dfaf404bf75731a310c55 340 SUPERFAMILY SSF46689 284 330 2.51E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0908 28079186718dfaf404bf75731a310c55 340 Gene3D G3DSA:1.10.10.60 227 334 5.4E-30 T 12-10-2018 PA257_0908 28079186718dfaf404bf75731a310c55 340 SMART SM00342 248 331 3.8E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0908 28079186718dfaf404bf75731a310c55 340 SUPERFAMILY SSF52317 29 214 1.34E-35 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 3 17 2.4E-32 T 12-10-2018 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 165 178 2.4E-32 T 12-10-2018 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 51 60 2.4E-32 T 12-10-2018 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 123 135 2.4E-32 T 12-10-2018 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 78 89 2.4E-32 T 12-10-2018 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 103 111 2.4E-32 T 12-10-2018 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 SUPERFAMILY SSF52317 1 189 9.48E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 186 1.1E-47 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 Gene3D G3DSA:3.40.50.880 1 190 1.4E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 Pfam PF00117 Glutamine amidotransferase class-I 5 186 1.8E-44 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 78 89 2.4E-14 T 12-10-2018 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 2.4E-14 T 12-10-2018 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 51 60 2.4E-14 T 12-10-2018 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 78 94 6.2E-8 T 12-10-2018 PA257_4824 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 48 62 6.2E-8 T 12-10-2018 PA257_3889 c1af2ae076a915e07b374db6b5bea849 251 Pfam PF13531 Bacterial extracellular solute-binding protein 27 250 7.7E-45 T 12-10-2018 PA257_3889 c1af2ae076a915e07b374db6b5bea849 251 SUPERFAMILY SSF53850 25 250 3.26E-63 T 12-10-2018 PA257_3889 c1af2ae076a915e07b374db6b5bea849 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 6.9E-77 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 PA257_3889 c1af2ae076a915e07b374db6b5bea849 251 Gene3D G3DSA:3.40.190.10 105 211 3.8E-81 T 12-10-2018 PA257_3889 c1af2ae076a915e07b374db6b5bea849 251 PIRSF PIRSF004846 1 251 5.6E-53 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 PA257_3889 c1af2ae076a915e07b374db6b5bea849 251 Gene3D G3DSA:3.40.190.10 30 249 3.8E-81 T 12-10-2018 PA257_5103 0e4223877254566a79a9d482472825c4 146 SUPERFAMILY SSF54593 15 145 5.24E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_5103 0e4223877254566a79a9d482472825c4 146 Gene3D G3DSA:3.30.720.110 88 145 4.4E-19 T 12-10-2018 PA257_5103 0e4223877254566a79a9d482472825c4 146 Gene3D G3DSA:3.30.720.120 9 77 9.8E-17 T 12-10-2018 PA257_5103 0e4223877254566a79a9d482472825c4 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 139 1.4E-6 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_2128 7ca5c0fcc6b7801b7e0d910d2513908b 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_2128 7ca5c0fcc6b7801b7e0d910d2513908b 246 Pfam PF00106 short chain dehydrogenase 15 207 1.6E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2128 7ca5c0fcc6b7801b7e0d910d2513908b 246 Gene3D G3DSA:3.40.50.720 1 245 1.2E-70 T 12-10-2018 PA257_2128 7ca5c0fcc6b7801b7e0d910d2513908b 246 SUPERFAMILY SSF51735 12 243 3.61E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2128 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.5E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2128 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.5E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2128 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.5E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2128 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.5E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2128 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.5E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4940 fa9b8186011d8703acefd188d493bd6d 61 SUPERFAMILY SSF117130 1 54 5.49E-21 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 PA257_4940 fa9b8186011d8703acefd188d493bd6d 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 1.6E-30 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 PA257_4940 fa9b8186011d8703acefd188d493bd6d 61 Gene3D G3DSA:3.30.70.1680 1 60 1.2E-30 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 PA257_4940 fa9b8186011d8703acefd188d493bd6d 61 Pfam PF02599 Global regulator protein family 1 53 9.1E-27 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 PA257_4940 fa9b8186011d8703acefd188d493bd6d 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-11 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 PA257_4940 fa9b8186011d8703acefd188d493bd6d 61 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 60 17.074 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 PA257_6503 9fe00126ea909cb5d57d7fa4adb4a898 561 Gene3D G3DSA:3.40.50.150 2 222 2.9E-14 T 12-10-2018 PA257_6503 9fe00126ea909cb5d57d7fa4adb4a898 561 SUPERFAMILY SSF53335 9 524 5.54E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5120 2851326855e0d37666eb52ea907951b9 997 Pfam PF00912 Transglycosylase 118 314 3.1E-25 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5120 2851326855e0d37666eb52ea907951b9 997 Gene3D G3DSA:1.10.3810.10 121 353 1.3E-6 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5120 2851326855e0d37666eb52ea907951b9 997 Gene3D G3DSA:3.40.710.10 773 986 1.4E-15 T 12-10-2018 PA257_5120 2851326855e0d37666eb52ea907951b9 997 SUPERFAMILY SSF53955 127 345 3.09E-9 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_5120 2851326855e0d37666eb52ea907951b9 997 SUPERFAMILY SSF56601 705 979 1.36E-26 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_0652 43235cd2998837e5ccfdaaf72c1d09b6 387 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 26 378 1.9E-186 T 12-10-2018 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ PA257_0652 43235cd2998837e5ccfdaaf72c1d09b6 387 PIRSF PIRSF037420 13 386 1.1E-139 T 12-10-2018 IPR017200 Coenzyme PQQ synthesis protein E PA257_0652 43235cd2998837e5ccfdaaf72c1d09b6 387 Gene3D G3DSA:3.20.20.70 22 250 3.9E-49 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0652 43235cd2998837e5ccfdaaf72c1d09b6 387 Pfam PF04055 Radical SAM superfamily 33 187 2.6E-25 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_0652 43235cd2998837e5ccfdaaf72c1d09b6 387 Pfam PF13353 4Fe-4S single cluster domain 28 138 2.5E-10 T 12-10-2018 PA257_0652 43235cd2998837e5ccfdaaf72c1d09b6 387 SMART SM00729 27 230 5.8E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_0652 43235cd2998837e5ccfdaaf72c1d09b6 387 SUPERFAMILY SSF102114 23 351 2.09E-68 T 12-10-2018 PA257_2968 66ba5b85e22911e04c0491cff3480920 884 Pfam PF07660 Secretin and TonB N terminus short domain 66 113 3.6E-7 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_2968 66ba5b85e22911e04c0491cff3480920 884 Gene3D G3DSA:2.170.130.10 129 271 1.7E-34 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_2968 66ba5b85e22911e04c0491cff3480920 884 Pfam PF00593 TonB dependent receptor 365 877 2.7E-42 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_2968 66ba5b85e22911e04c0491cff3480920 884 SMART SM00965 65 116 8.7E-10 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_2968 66ba5b85e22911e04c0491cff3480920 884 Gene3D G3DSA:2.40.170.20 288 884 2.4E-53 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_2968 66ba5b85e22911e04c0491cff3480920 884 Pfam PF07715 TonB-dependent Receptor Plug Domain 147 267 8.6E-23 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_2968 66ba5b85e22911e04c0491cff3480920 884 SUPERFAMILY SSF56935 127 884 3.66E-98 T 12-10-2018 PA257_2968 66ba5b85e22911e04c0491cff3480920 884 Gene3D G3DSA:3.55.50.30 44 114 8.8E-15 T 12-10-2018 PA257_2891 75199ee739f06017818ceb95cd4b75f8 88 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 1 68 5.0E-18 T 12-10-2018 IPR035242 Protein of unknown function DUF5329 PA257_2891 75199ee739f06017818ceb95cd4b75f8 88 Pfam PF17263 Family of unknown function (DUF5329) 1 85 5.6E-33 T 12-10-2018 IPR035242 Protein of unknown function DUF5329 PA257_5155 4bc926584627d11abedb92617efc1644 414 Gene3D G3DSA:2.40.160.10 29 414 7.3E-185 T 12-10-2018 IPR023614 Porin domain superfamily PA257_5155 4bc926584627d11abedb92617efc1644 414 Pfam PF03573 outer membrane porin, OprD family 24 412 1.5E-168 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_5945 e6315abd66cc3c595038a661e21e1a04 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.9E-47 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 PA257_5945 e6315abd66cc3c595038a661e21e1a04 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.6E-45 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 PA257_5945 e6315abd66cc3c595038a661e21e1a04 126 SUPERFAMILY SSF50692 1 120 2.49E-46 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PA257_5945 e6315abd66cc3c595038a661e21e1a04 126 Gene3D G3DSA:2.40.40.20 1 126 2.7E-50 T 12-10-2018 PA257_5945 e6315abd66cc3c595038a661e21e1a04 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 65.559 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 PA257_5945 e6315abd66cc3c595038a661e21e1a04 126 PIRSF PIRSF006246 1 125 7.5E-50 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 PA257_5945 e6315abd66cc3c595038a661e21e1a04 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 3.0E-66 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 Gene3D G3DSA:3.40.120.10 408 561 2.2E-63 T 12-10-2018 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 Gene3D G3DSA:3.30.310.50 778 870 1.2E-29 T 12-10-2018 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 SUPERFAMILY SSF53738 667 770 7.06E-33 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 Gene3D G3DSA:3.40.120.10 581 658 1.4E-36 T 12-10-2018 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 SUPERFAMILY SSF53738 563 664 9.81E-33 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 566 662 7.8E-28 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 509 518 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 508 522 1.0E-24 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 642 657 1.0E-24 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 613 626 1.0E-24 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 579 598 1.0E-24 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 SUPERFAMILY SSF53738 419 559 5.49E-39 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 420 549 1.3E-36 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 SUPERFAMILY SSF55957 777 868 9.24E-26 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 Gene3D G3DSA:3.40.120.10 659 777 3.3E-41 T 12-10-2018 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 782 859 2.6E-13 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6707 30bcddbc7bdd6c50d381328e0d0ddfd1 870 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 667 771 5.9E-21 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_2901 50951ccbbea1be3c0125d21e0ce8cec2 441 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 1.2E-6 T 12-10-2018 PA257_2901 50951ccbbea1be3c0125d21e0ce8cec2 441 PRINTS PR00173 Glutamate-aspartate symporter signature 253 272 1.2E-6 T 12-10-2018 PA257_2901 50951ccbbea1be3c0125d21e0ce8cec2 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.2E-6 T 12-10-2018 PA257_2901 50951ccbbea1be3c0125d21e0ce8cec2 441 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.2E-6 T 12-10-2018 PA257_2901 50951ccbbea1be3c0125d21e0ce8cec2 441 Pfam PF03553 Na+/H+ antiporter family 151 435 1.6E-77 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PA257_2901 50951ccbbea1be3c0125d21e0ce8cec2 441 Pfam PF13726 Na+-H+ antiporter family 2 88 2.5E-32 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal PA257_4609 6eb7bf22fce231607780b9767c4ea465 256 Pfam PF02146 Sir2 family 25 202 3.5E-37 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 PA257_4609 6eb7bf22fce231607780b9767c4ea465 256 SUPERFAMILY SSF52467 6 254 1.87E-69 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_4609 6eb7bf22fce231607780b9767c4ea465 256 Gene3D G3DSA:3.30.1600.10 34 175 4.2E-61 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily PA257_4609 6eb7bf22fce231607780b9767c4ea465 256 Gene3D G3DSA:3.40.50.1220 16 249 4.2E-61 T 12-10-2018 PA257_5240 7d42e4e74acba1b7521a3fd3eb7da79f 961 Pfam PF01526 Tn3 transposase DDE domain 554 936 1.6E-115 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 PA257_5240 7d42e4e74acba1b7521a3fd3eb7da79f 961 Pfam PF13700 Domain of unknown function (DUF4158) 3 159 9.9E-24 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 PA257_3328 9da00522cb6642aa73ff8d1ebc0b43ae 417 Pfam PF07690 Major Facilitator Superfamily 31 338 8.6E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3328 9da00522cb6642aa73ff8d1ebc0b43ae 417 SUPERFAMILY SSF103473 17 391 1.16E-51 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3328 9da00522cb6642aa73ff8d1ebc0b43ae 417 Gene3D G3DSA:1.20.1250.20 24 393 1.9E-45 T 12-10-2018 PA257_0100 c5e5a2236f9cbe58ee2e8537e4c45264 154 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 11 143 6.8E-44 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN PA257_0100 c5e5a2236f9cbe58ee2e8537e4c45264 154 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 146 5.0E-50 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN PA257_0100 c5e5a2236f9cbe58ee2e8537e4c45264 154 Gene3D G3DSA:2.60.40.4150 24 154 5.2E-49 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 SMART SM00387 317 429 2.4E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 Gene3D G3DSA:3.30.565.10 275 426 2.1E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 SUPERFAMILY SSF47384 191 272 8.04E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 Pfam PF00989 PAS fold 98 152 1.5E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 Pfam PF11808 Domain of unknown function (DUF3329) 5 90 2.2E-28 T 12-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 SUPERFAMILY SSF55874 261 425 1.31E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 5.1E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 SUPERFAMILY SSF55785 109 204 1.1E-7 T 12-10-2018 IPR035965 PAS domain superfamily PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 3.4E-139 T 12-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 426 4.1E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 SMART SM00091 98 166 6.6E-5 T 12-10-2018 IPR000014 PAS domain PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 Gene3D G3DSA:3.30.450.20 100 201 2.6E-8 T 12-10-2018 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 SMART SM00388 205 272 4.4E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6749 d2a1f022577c81eecfc9cdac00b55dec 439 Gene3D G3DSA:1.10.287.130 202 272 9.7E-24 T 12-10-2018 PA257_1507 e488e806882d702994878be6bb4b90be 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 168 221 9.7E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1507 e488e806882d702994878be6bb4b90be 229 Gene3D G3DSA:3.40.50.2300 17 158 2.4E-28 T 12-10-2018 PA257_1507 e488e806882d702994878be6bb4b90be 229 SMART SM00448 19 135 3.4E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1507 e488e806882d702994878be6bb4b90be 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 183 210 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1507 e488e806882d702994878be6bb4b90be 229 Gene3D G3DSA:1.10.10.10 160 229 1.7E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1507 e488e806882d702994878be6bb4b90be 229 SUPERFAMILY SSF52172 17 143 5.69E-25 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1507 e488e806882d702994878be6bb4b90be 229 SMART SM00421 166 223 2.4E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1507 e488e806882d702994878be6bb4b90be 229 SUPERFAMILY SSF46894 159 228 1.22E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_1507 e488e806882d702994878be6bb4b90be 229 Pfam PF00072 Response regulator receiver domain 21 136 5.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1507 e488e806882d702994878be6bb4b90be 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 199 2.2E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1507 e488e806882d702994878be6bb4b90be 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 199 211 2.2E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1507 e488e806882d702994878be6bb4b90be 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 183 2.2E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1102 d740b9d5924abb0a9f87c3984b7255c9 214 Pfam PF13975 gag-polyprotein putative aspartyl protease 107 198 1.2E-26 T 12-10-2018 PA257_1102 d740b9d5924abb0a9f87c3984b7255c9 214 Gene3D G3DSA:2.40.70.10 87 214 5.7E-32 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_1102 d740b9d5924abb0a9f87c3984b7255c9 214 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 117 128 - T 12-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 PA257_1102 d740b9d5924abb0a9f87c3984b7255c9 214 SUPERFAMILY SSF50630 98 201 3.5E-20 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_1102 d740b9d5924abb0a9f87c3984b7255c9 214 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 94 211 1.4E-42 T 12-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal PA257_0742 cc1828d4112b00cf2bb26195300884a4 328 SUPERFAMILY SSF53659 3 326 3.9E-113 T 12-10-2018 PA257_0742 cc1828d4112b00cf2bb26195300884a4 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 327 36.426 T 12-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 PA257_0742 cc1828d4112b00cf2bb26195300884a4 328 Gene3D G3DSA:3.40.718.10 1 328 5.6E-135 T 12-10-2018 PA257_0742 cc1828d4112b00cf2bb26195300884a4 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 320 7.6E-110 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 PA257_0742 cc1828d4112b00cf2bb26195300884a4 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 7.1E-129 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 PA257_1697 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 447 4.4E-56 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PA257_1697 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Gene3D G3DSA:3.30.420.40 2 251 1.4E-102 T 12-10-2018 PA257_1697 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 1.8E-73 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PA257_1697 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PA257_1697 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Hamap MF_00186 Glycerol kinase [glpK]. 2 494 54.257 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 PA257_1697 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 SUPERFAMILY SSF53067 4 253 2.85E-93 T 12-10-2018 PA257_1697 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 SUPERFAMILY SSF53067 253 492 9.06E-78 T 12-10-2018 PA257_1697 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Gene3D G3DSA:3.30.420.40 252 491 5.5E-84 T 12-10-2018 PA257_1697 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 PIRSF PIRSF000538 2 494 3.1E-169 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PA257_1697 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 491 2.4E-217 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 PA257_2876 0e04abda07dc763435c2ee5a264c410e 395 Gene3D G3DSA:1.20.81.30 247 360 3.2E-22 T 12-10-2018 PA257_2876 0e04abda07dc763435c2ee5a264c410e 395 Gene3D G3DSA:1.20.81.30 48 164 1.5E-20 T 12-10-2018 PA257_2876 0e04abda07dc763435c2ee5a264c410e 395 Pfam PF00482 Type II secretion system (T2SS), protein F 266 385 2.6E-21 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_2876 0e04abda07dc763435c2ee5a264c410e 395 Pfam PF00482 Type II secretion system (T2SS), protein F 63 185 4.3E-28 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_2876 0e04abda07dc763435c2ee5a264c410e 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 58 70 1.3E-13 T 12-10-2018 IPR003004 GspF/PilC family PA257_2876 0e04abda07dc763435c2ee5a264c410e 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 157 185 1.3E-13 T 12-10-2018 IPR003004 GspF/PilC family PA257_2876 0e04abda07dc763435c2ee5a264c410e 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 359 373 1.3E-13 T 12-10-2018 IPR003004 GspF/PilC family PA257_2876 0e04abda07dc763435c2ee5a264c410e 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 375 394 1.3E-13 T 12-10-2018 IPR003004 GspF/PilC family PA257_0690 50d227fa37067baade4b44b99ea63a81 329 Gene3D G3DSA:3.40.50.150 145 319 1.4E-34 T 12-10-2018 PA257_0690 50d227fa37067baade4b44b99ea63a81 329 SUPERFAMILY SSF46785 6 202 2.59E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0690 50d227fa37067baade4b44b99ea63a81 329 SUPERFAMILY SSF53335 153 309 1.67E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0690 50d227fa37067baade4b44b99ea63a81 329 SMART SM00418 14 91 6.7E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_0690 50d227fa37067baade4b44b99ea63a81 329 Pfam PF12840 Helix-turn-helix domain 15 71 1.4E-11 T 12-10-2018 PA257_0690 50d227fa37067baade4b44b99ea63a81 329 Gene3D G3DSA:1.10.10.10 2 111 4.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0690 50d227fa37067baade4b44b99ea63a81 329 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 9.3E-10 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_0690 50d227fa37067baade4b44b99ea63a81 329 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 9.3E-10 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_0690 50d227fa37067baade4b44b99ea63a81 329 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 9.3E-10 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_0690 50d227fa37067baade4b44b99ea63a81 329 Pfam PF13489 Methyltransferase domain 150 290 1.1E-17 T 12-10-2018 PA257_0901 d38c6a570e3fa9859ffdb130e89a117a 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.5E-20 T 12-10-2018 PA257_0901 d38c6a570e3fa9859ffdb130e89a117a 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.5E-20 T 12-10-2018 PA257_0901 d38c6a570e3fa9859ffdb130e89a117a 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.5E-20 T 12-10-2018 PA257_0901 d38c6a570e3fa9859ffdb130e89a117a 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 336 352 1.5E-20 T 12-10-2018 PA257_0901 d38c6a570e3fa9859ffdb130e89a117a 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 1.5E-20 T 12-10-2018 PA257_0901 d38c6a570e3fa9859ffdb130e89a117a 401 SUPERFAMILY SSF51905 6 364 5.83E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0901 d38c6a570e3fa9859ffdb130e89a117a 401 Pfam PF01494 FAD binding domain 6 348 3.0E-34 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 PA257_0901 d38c6a570e3fa9859ffdb130e89a117a 401 Gene3D G3DSA:3.50.50.60 7 343 5.2E-120 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0901 d38c6a570e3fa9859ffdb130e89a117a 401 Gene3D G3DSA:3.30.9.50 48 272 5.2E-120 T 12-10-2018 PA257_4293 f28da4e80800fae327783af5caf35ebe 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 283 4.7E-36 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PA257_4293 f28da4e80800fae327783af5caf35ebe 296 SUPERFAMILY SSF48179 164 291 1.81E-37 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_4293 f28da4e80800fae327783af5caf35ebe 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 5.1E-50 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PA257_4293 f28da4e80800fae327783af5caf35ebe 296 PIRSF PIRSF000103 1 291 3.7E-75 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_4293 f28da4e80800fae327783af5caf35ebe 296 SUPERFAMILY SSF51735 2 162 1.53E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4293 f28da4e80800fae327783af5caf35ebe 296 Gene3D G3DSA:1.10.1040.10 163 294 9.3E-38 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_4293 f28da4e80800fae327783af5caf35ebe 296 Gene3D G3DSA:3.40.50.720 1 162 9.2E-53 T 12-10-2018 PA257_4293 f28da4e80800fae327783af5caf35ebe 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 291 6.7E-118 T 12-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 PA257_2685 a29c8f393e26fe960b18b2cd27c7eea8 275 SUPERFAMILY SSF53098 101 263 3.04E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_2685 a29c8f393e26fe960b18b2cd27c7eea8 275 Pfam PF00665 Integrase core domain 108 223 6.9E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_2685 a29c8f393e26fe960b18b2cd27c7eea8 275 Gene3D G3DSA:3.30.420.10 99 249 3.5E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_2685 a29c8f393e26fe960b18b2cd27c7eea8 275 Pfam PF13276 HTH-like domain 31 83 1.8E-13 T 12-10-2018 IPR025948 HTH-like domain PA257_2734 a29c8f393e26fe960b18b2cd27c7eea8 275 SUPERFAMILY SSF53098 101 263 3.04E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_2734 a29c8f393e26fe960b18b2cd27c7eea8 275 Pfam PF00665 Integrase core domain 108 223 6.9E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_2734 a29c8f393e26fe960b18b2cd27c7eea8 275 Gene3D G3DSA:3.30.420.10 99 249 3.5E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_2734 a29c8f393e26fe960b18b2cd27c7eea8 275 Pfam PF13276 HTH-like domain 31 83 1.8E-13 T 12-10-2018 IPR025948 HTH-like domain PA257_3114 a29c8f393e26fe960b18b2cd27c7eea8 275 SUPERFAMILY SSF53098 101 263 3.04E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_3114 a29c8f393e26fe960b18b2cd27c7eea8 275 Pfam PF00665 Integrase core domain 108 223 6.9E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_3114 a29c8f393e26fe960b18b2cd27c7eea8 275 Gene3D G3DSA:3.30.420.10 99 249 3.5E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_3114 a29c8f393e26fe960b18b2cd27c7eea8 275 Pfam PF13276 HTH-like domain 31 83 1.8E-13 T 12-10-2018 IPR025948 HTH-like domain PA257_4633 c3d3b0e42e36628a7615159e69554266 834 SMART SM00926 41 95 4.3E-9 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 SUPERFAMILY SSF53706 37 648 1.96E-201 T 12-10-2018 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 Gene3D G3DSA:3.40.228.10 177 706 0.0 T 12-10-2018 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 831 32.357 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 Pfam PF00384 Molybdopterin oxidoreductase 98 571 1.7E-86 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 Gene3D G3DSA:2.40.40.20 707 830 9.4E-51 T 12-10-2018 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 94 2.2E-14 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 Pfam PF01568 Molydopterin dinucleotide binding domain 717 825 6.0E-25 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 Gene3D G3DSA:3.30.200.210 42 669 0.0 T 12-10-2018 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 SUPERFAMILY SSF50692 690 829 4.14E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PA257_4633 c3d3b0e42e36628a7615159e69554266 834 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 829 0.0 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 PA257_4633 c3d3b0e42e36628a7615159e69554266 834 Gene3D G3DSA:3.40.50.740 98 626 0.0 T 12-10-2018 PA257_2544 c7ebca1737ce1ee735374518da014372 171 Gene3D G3DSA:3.30.1060.10 2 169 3.5E-70 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2544 c7ebca1737ce1ee735374518da014372 171 SUPERFAMILY SSF55068 2 160 2.09E-63 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2544 c7ebca1737ce1ee735374518da014372 171 Pfam PF01625 Peptide methionine sulfoxide reductase 5 152 8.5E-57 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2544 c7ebca1737ce1ee735374518da014372 171 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 158 33.269 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2544 c7ebca1737ce1ee735374518da014372 171 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 152 1.0E-48 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 Gene3D G3DSA:1.10.287.130 379 470 1.7E-25 T 12-10-2018 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 SUPERFAMILY SSF55874 461 633 5.11E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 Pfam PF00072 Response regulator receiver domain 791 907 7.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 Pfam PF07695 7TM diverse intracellular signalling 183 383 5.3E-35 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 SUPERFAMILY SSF52172 789 913 1.71E-34 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 SMART SM00388 407 472 2.6E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 SUPERFAMILY SSF47384 395 473 3.73E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 Gene3D G3DSA:3.40.50.12740 790 918 3.3E-38 T 12-10-2018 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 519 634 2.4E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 574 3.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 632 3.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 588 3.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 613 3.0E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 SMART SM00448 789 907 3.4E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 Gene3D G3DSA:3.30.565.10 471 636 7.5E-55 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 SMART SM00387 519 635 8.2E-41 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 Pfam PF00512 His Kinase A (phospho-acceptor) domain 407 472 1.8E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 Pfam PF07696 7TMR-DISM extracellular 2 36 168 2.3E-32 T 12-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 PA257_1808 1bc1e07410d41a01518432c8d36ed910 918 Gene3D G3DSA:2.60.40.2380 32 173 3.4E-28 T 12-10-2018 PA257_1478 f11d2c57f8c784bdf010c26e164d0942 141 Pfam PF03061 Thioesterase superfamily 31 103 2.5E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_1478 f11d2c57f8c784bdf010c26e164d0942 141 Gene3D G3DSA:3.10.129.10 5 140 1.7E-39 T 12-10-2018 PA257_1478 f11d2c57f8c784bdf010c26e164d0942 141 SUPERFAMILY SSF54637 16 133 6.95E-36 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_0307 f191bf2327de2282fac87680fd6050a1 259 Pfam PF01909 Nucleotidyltransferase domain 24 97 9.0E-7 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PA257_0307 f191bf2327de2282fac87680fd6050a1 259 SUPERFAMILY SSF81301 5 98 6.54E-13 T 12-10-2018 PA257_0307 f191bf2327de2282fac87680fd6050a1 259 Gene3D G3DSA:3.30.460.10 3 95 4.9E-8 T 12-10-2018 PA257_0307 f191bf2327de2282fac87680fd6050a1 259 Pfam PF13427 Domain of unknown function (DUF4111) 149 250 9.6E-32 T 12-10-2018 IPR025184 Domain of unknown function DUF4111 PA257_0307 f191bf2327de2282fac87680fd6050a1 259 PIRSF PIRSF000819 4 257 2.2E-54 T 12-10-2018 IPR024172 Streptomycin 3''-adenylyltransferase GO:0009012|GO:0046677 PA257_5464 ba4956b83fee3856002645511b64094e 698 Gene3D G3DSA:3.30.450.20 271 399 1.7E-14 T 12-10-2018 PA257_5464 ba4956b83fee3856002645511b64094e 698 SUPERFAMILY SSF47384 408 502 2.55E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_5464 ba4956b83fee3856002645511b64094e 698 Gene3D G3DSA:1.10.287.130 404 500 2.4E-23 T 12-10-2018 PA257_5464 ba4956b83fee3856002645511b64094e 698 Gene3D G3DSA:3.30.565.10 505 675 1.9E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5464 ba4956b83fee3856002645511b64094e 698 Pfam PF00672 HAMP domain 185 234 3.2E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5464 ba4956b83fee3856002645511b64094e 698 SUPERFAMILY SSF55785 275 395 4.54E-12 T 12-10-2018 IPR035965 PAS domain superfamily PA257_5464 ba4956b83fee3856002645511b64094e 698 SUPERFAMILY SSF158472 185 234 3.27E-7 T 12-10-2018 PA257_5464 ba4956b83fee3856002645511b64094e 698 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 402 4.5E-6 T 12-10-2018 IPR000014 PAS domain PA257_5464 ba4956b83fee3856002645511b64094e 698 SMART SM00091 287 352 3.8E-5 T 12-10-2018 IPR000014 PAS domain PA257_5464 ba4956b83fee3856002645511b64094e 698 SMART SM00304 185 238 1.4E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5464 ba4956b83fee3856002645511b64094e 698 Pfam PF00512 His Kinase A (phospho-acceptor) domain 413 499 1.3E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5464 ba4956b83fee3856002645511b64094e 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 609 1.9E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5464 ba4956b83fee3856002645511b64094e 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 664 1.9E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5464 ba4956b83fee3856002645511b64094e 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 1.9E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5464 ba4956b83fee3856002645511b64094e 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 623 1.9E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5464 ba4956b83fee3856002645511b64094e 698 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 666 1.4E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5464 ba4956b83fee3856002645511b64094e 698 Pfam PF08448 PAS fold 294 397 6.8E-9 T 12-10-2018 IPR013656 PAS fold-4 PA257_5464 ba4956b83fee3856002645511b64094e 698 SUPERFAMILY SSF55874 506 665 1.7E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5464 ba4956b83fee3856002645511b64094e 698 SMART SM00387 550 667 2.5E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5464 ba4956b83fee3856002645511b64094e 698 Gene3D G3DSA:1.20.1480.50 156 244 3.3E-8 T 12-10-2018 PA257_5464 ba4956b83fee3856002645511b64094e 698 SMART SM00388 412 502 2.6E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6083 b3099bf6242063ce1c5fc9a645b7e0a8 309 Gene3D G3DSA:1.20.5.480 244 289 2.1E-16 T 12-10-2018 IPR038384 Formate dehydrogenase, C-terminal domain superfamily PA257_6083 b3099bf6242063ce1c5fc9a645b7e0a8 309 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 129 140 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_6083 b3099bf6242063ce1c5fc9a645b7e0a8 309 Pfam PF12800 4Fe-4S binding domain 33 45 0.069 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_6083 b3099bf6242063ce1c5fc9a645b7e0a8 309 Pfam PF13247 4Fe-4S dicluster domain 88 184 1.5E-24 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_6083 b3099bf6242063ce1c5fc9a645b7e0a8 309 SUPERFAMILY SSF54862 24 265 2.2E-70 T 12-10-2018 PA257_6083 b3099bf6242063ce1c5fc9a645b7e0a8 309 Gene3D G3DSA:3.30.70.20 23 223 4.3E-96 T 12-10-2018 PA257_6083 b3099bf6242063ce1c5fc9a645b7e0a8 309 Gene3D G3DSA:3.30.70.20 15 158 4.3E-96 T 12-10-2018 PA257_6083 b3099bf6242063ce1c5fc9a645b7e0a8 309 PIRSF PIRSF036298 1 304 3.4E-160 T 12-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 PA257_6083 b3099bf6242063ce1c5fc9a645b7e0a8 309 Pfam PF09163 Formate dehydrogenase N, transmembrane 242 284 3.1E-23 T 12-10-2018 IPR015246 Formate dehydrogenase, transmembrane PA257_6083 b3099bf6242063ce1c5fc9a645b7e0a8 309 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 5 286 1.4E-143 T 12-10-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 PA257_2281 918b206da732cd89b2299ce78b26080b 128 Pfam PF07007 Lysozyme inhibitor LprI 37 111 5.6E-14 T 12-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal PA257_2281 918b206da732cd89b2299ce78b26080b 128 Gene3D G3DSA:1.20.1270.180 21 122 5.2E-10 T 12-10-2018 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.903 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.6E-29 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 2.6E-28 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 Gene3D G3DSA:3.10.50.30 76 158 2.2E-30 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 SUPERFAMILY SSF46557 3 78 1.02E-27 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 PIRSF PIRSF006092 1 158 1.6E-52 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 SUPERFAMILY SSF54534 82 157 2.09E-24 T 12-10-2018 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 Gene3D G3DSA:1.10.287.180 1 75 2.9E-30 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 PA257_5972 1a023b65d9a9021d5826c3be752dca2c 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.3E-57 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 PA257_4570 1f1e583049495840dff0e748f74f1c08 302 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 213 7.5E-34 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_4570 1f1e583049495840dff0e748f74f1c08 302 SUPERFAMILY SSF111369 41 184 2.09E-21 T 12-10-2018 PA257_4570 1f1e583049495840dff0e748f74f1c08 302 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 226 1.1E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_4570 1f1e583049495840dff0e748f74f1c08 302 Gene3D G3DSA:2.40.30.170 43 266 1.6E-36 T 12-10-2018 PA257_4570 1f1e583049495840dff0e748f74f1c08 302 Pfam PF00529 HlyD membrane-fusion protein of T1SS 227 278 8.8E-7 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_4570 1f1e583049495840dff0e748f74f1c08 302 Gene3D G3DSA:2.40.50.100 44 188 1.6E-36 T 12-10-2018 PA257_4570 1f1e583049495840dff0e748f74f1c08 302 Gene3D G3DSA:1.10.287.470 78 153 1.6E-36 T 12-10-2018 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 Gene3D G3DSA:3.40.50.720 4 324 7.2E-144 T 12-10-2018 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 SUPERFAMILY SSF55347 154 313 6.55E-67 T 12-10-2018 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 PIRSF PIRSF000149 1 334 2.2E-135 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.9E-127 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 Gene3D G3DSA:3.30.360.10 153 314 7.2E-144 T 12-10-2018 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 312 2.3E-61 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 SMART SM00846 3 154 3.3E-94 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 SUPERFAMILY SSF51735 1 182 1.5E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.3E-35 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 3.3E-35 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 3.3E-35 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 3.3E-35 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 3.3E-35 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2102 b7ef29896ee2122c75f4920289c3a4cd 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 105 6.0E-38 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF52777 3069 3239 1.11E-41 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF52777 2594 2794 8.56E-44 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2144 2155 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF47336 2511 2581 1.31E-17 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.559.10 1553 1913 1.2E-130 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF52777 1547 1739 9.89E-43 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF52777 1726 1965 1.45E-54 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 ProSitePatterns PS00455 Putative AMP-binding domain signature. 658 669 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.559.30 233 482 2.0E-154 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.559.30 1725 1978 1.2E-130 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.40.50.12780 503 906 1.9E-151 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF56801 474 1031 3.79E-168 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF52777 52 229 4.78E-53 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF56801 1960 2532 4.32E-149 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.559.30 3241 3497 5.1E-124 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF13193 AMP-binding enzyme C-terminal domain 3937 4020 8.2E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF13193 AMP-binding enzyme C-terminal domain 921 992 1.2E-12 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF13193 AMP-binding enzyme C-terminal domain 2411 2493 7.9E-12 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF52777 1271 1518 5.56E-46 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00550 Phosphopantetheine attachment site 1020 1079 9.2E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00550 Phosphopantetheine attachment site 2520 2580 5.4E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00550 Phosphopantetheine attachment site 4048 4107 9.6E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SMART SM00823 Phosphopantetheine attachment site 4049 4115 0.012 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SMART SM00823 Phosphopantetheine attachment site 1018 1086 0.0012 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SMART SM00823 Phosphopantetheine attachment site 2519 2587 0.024 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2543 2558 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:1.10.1200.10 1006 1085 1.4E-25 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:1.10.1200.10 4035 4115 2.7E-23 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:1.10.1200.10 2510 2586 1.8E-23 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.300.30 907 1005 1.8E-32 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.300.30 3922 4034 2.2E-35 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.300.30 2396 2509 5.1E-35 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3542 3953 4.6E-131 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2023 2427 9.0E-121 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 539 937 1.3E-139 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.559.10 2587 2764 2.3E-54 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.559.10 1086 1254 4.7E-51 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.559.10 3069 3431 5.1E-124 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF52777 2781 3038 1.89E-44 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF47336 4038 4109 5.23E-18 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00501 AMP-binding enzyme 3522 3929 5.1E-93 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00501 AMP-binding enzyme 517 913 1.1E-101 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00501 AMP-binding enzyme 2003 2403 4.0E-84 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4070 4085 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.40.50.12780 3510 3921 1.9E-136 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.40.50.12780 1992 2395 1.3E-127 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF52777 1100 1264 1.22E-38 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1388 1542 7.0E-51 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2901 3056 9.5E-46 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF56801 3485 4059 2.35E-156 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF47336 1010 1079 3.4E-19 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.559.10 52 426 2.0E-154 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF52777 235 504 7.45E-63 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3663 3674 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1042 1057 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00668 Condensation domain 2599 3043 5.0E-80 T 12-10-2018 IPR001242 Condensation domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00668 Condensation domain 1096 1521 7.2E-76 T 12-10-2018 IPR001242 Condensation domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00668 Condensation domain 52 497 3.7E-107 T 12-10-2018 IPR001242 Condensation domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00668 Condensation domain 1548 1980 3.1E-90 T 12-10-2018 IPR001242 Condensation domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Pfam PF00668 Condensation domain 3064 3499 5.3E-85 T 12-10-2018 IPR001242 Condensation domain PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.559.30 1255 1522 6.5E-84 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 Gene3D G3DSA:3.30.559.30 2765 3034 2.3E-82 T 12-10-2018 PA257_3238 1519fbf91d230681a5e01ce3b863dda4 4136 SUPERFAMILY SSF52777 3242 3483 3.11E-52 T 12-10-2018 PA257_1774 8f715af309c4507f620776a45dc0cb45 214 Pfam PF04205 FMN-binding domain 105 194 1.7E-17 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 PA257_1774 8f715af309c4507f620776a45dc0cb45 214 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 14 198 2.6E-67 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PA257_1774 8f715af309c4507f620776a45dc0cb45 214 SMART SM00900 105 197 1.4E-36 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 PA257_1774 8f715af309c4507f620776a45dc0cb45 214 PIRSF PIRSF006091 1 210 4.5E-75 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PA257_1774 8f715af309c4507f620776a45dc0cb45 214 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 6 199 27.966 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PA257_4737 15cae870d2995e3813d2677c278f3010 231 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 228 31.326 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PA257_4737 15cae870d2995e3813d2677c278f3010 231 Pfam PF02107 Flagellar L-ring protein 44 230 3.3E-61 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PA257_4737 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 207 221 4.4E-26 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PA257_4737 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 170 186 4.4E-26 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PA257_4737 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 66 78 4.4E-26 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PA257_4737 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 191 205 4.4E-26 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PA257_4737 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 144 159 4.4E-26 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PA257_3391 a985d927de43d650835c0310131e0d2f 239 Gene3D G3DSA:3.60.130.10 1 239 3.0E-95 T 12-10-2018 PA257_3391 a985d927de43d650835c0310131e0d2f 239 SUPERFAMILY SSF51197 22 237 2.2E-37 T 12-10-2018 PA257_3391 a985d927de43d650835c0310131e0d2f 239 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 43 237 2.5E-22 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 PA257_2249 424ac9d03989da5d2dc8c78d02e23586 342 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 PA257_2249 424ac9d03989da5d2dc8c78d02e23586 342 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 338 1.5E-131 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PA257_2249 424ac9d03989da5d2dc8c78d02e23586 342 Gene3D G3DSA:3.20.20.70 1 334 2.1E-132 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2249 424ac9d03989da5d2dc8c78d02e23586 342 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 51.199 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PA257_2249 424ac9d03989da5d2dc8c78d02e23586 342 SUPERFAMILY SSF51395 1 336 3.22E-106 T 12-10-2018 PA257_2249 424ac9d03989da5d2dc8c78d02e23586 342 PIRSF PIRSF000164 16 342 2.6E-94 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 PA257_2249 424ac9d03989da5d2dc8c78d02e23586 342 Pfam PF01180 Dihydroorotate dehydrogenase 44 335 1.2E-86 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PA257_1618 d78074a5f2be129ba1ed51f2d564bdfc 69 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PA257_1618 d78074a5f2be129ba1ed51f2d564bdfc 69 Gene3D G3DSA:1.20.120.910 2 68 2.1E-17 T 12-10-2018 PA257_1618 d78074a5f2be129ba1ed51f2d564bdfc 69 PRINTS PR00618 DksA/TraR zinc finger signature 35 46 3.7E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PA257_1618 d78074a5f2be129ba1ed51f2d564bdfc 69 PRINTS PR00618 DksA/TraR zinc finger signature 47 59 3.7E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PA257_1618 d78074a5f2be129ba1ed51f2d564bdfc 69 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 61 5.0E-10 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PA257_1618 d78074a5f2be129ba1ed51f2d564bdfc 69 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 1.9E-18 T 12-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type PA257_1618 d78074a5f2be129ba1ed51f2d564bdfc 69 SUPERFAMILY SSF57716 35 68 9.84E-7 T 12-10-2018 PA257_4592 b1c8d514ddfc909277331b2f311949b8 532 Gene3D G3DSA:3.60.20.10 90 200 1.5E-18 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_4592 b1c8d514ddfc909277331b2f311949b8 532 SUPERFAMILY SSF56235 1 193 9.44E-28 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_4592 b1c8d514ddfc909277331b2f311949b8 532 SUPERFAMILY SSF52402 211 490 1.38E-17 T 12-10-2018 PA257_4592 b1c8d514ddfc909277331b2f311949b8 532 PIRSF PIRSF001589 94 531 1.3E-42 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PA257_4592 b1c8d514ddfc909277331b2f311949b8 532 PIRSF PIRSF001589 1 76 1.4E-6 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PA257_4592 b1c8d514ddfc909277331b2f311949b8 532 Pfam PF00733 Asparagine synthase 214 525 5.4E-45 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PA257_4592 b1c8d514ddfc909277331b2f311949b8 532 Pfam PF13537 Glutamine amidotransferase domain 97 145 2.0E-13 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 120 133 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 SMART SM00839 202 443 1.4E-91 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 200 443 4.3E-86 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 PIRSF PIRSF000185 20 445 5.4E-119 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 Gene3D G3DSA:1.10.285.10 384 445 8.7E-11 T 12-10-2018 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 Gene3D G3DSA:3.40.50.10860 53 188 4.7E-174 T 12-10-2018 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 SUPERFAMILY SSF51735 200 444 8.74E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 Gene3D G3DSA:1.10.285.10 5 382 4.7E-174 T 12-10-2018 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 370 381 6.6E-33 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 233 253 6.6E-33 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 6.6E-33 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 191 213 6.6E-33 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 4.4E-50 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 Gene3D G3DSA:3.40.50.720 207 371 4.7E-174 T 12-10-2018 PA257_5767 18406430e477a6c77de8a5bcce1db1f0 445 SUPERFAMILY SSF53223 4 194 2.81E-75 T 12-10-2018 PA257_0589 2494aa021063827b19510b1519147c21 443 Gene3D G3DSA:3.90.226.10 20 247 1.4E-61 T 12-10-2018 PA257_0589 2494aa021063827b19510b1519147c21 443 Pfam PF01957 NfeD-like C-terminal, partner-binding 298 436 3.8E-32 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain PA257_0589 2494aa021063827b19510b1519147c21 443 Gene3D G3DSA:2.40.50.140 371 440 4.7E-8 T 12-10-2018 PA257_0589 2494aa021063827b19510b1519147c21 443 SUPERFAMILY SSF52096 25 194 1.59E-26 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_0589 2494aa021063827b19510b1519147c21 443 SUPERFAMILY SSF141322 370 436 9.29E-8 T 12-10-2018 PA257_6339 8b6d31de5bff809a9a31fe02fdd7a0dc 255 Gene3D G3DSA:2.40.50.90 21 158 2.8E-29 T 12-10-2018 IPR035437 SNase-like, OB-fold superfamily PA257_6339 8b6d31de5bff809a9a31fe02fdd7a0dc 255 SMART SM00318 24 155 3.3E-14 T 12-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 PA257_6339 8b6d31de5bff809a9a31fe02fdd7a0dc 255 SUPERFAMILY SSF50199 22 156 1.83E-28 T 12-10-2018 PA257_6339 8b6d31de5bff809a9a31fe02fdd7a0dc 255 Pfam PF00565 Staphylococcal nuclease homologue 47 154 2.5E-16 T 12-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 PA257_5988 35bcc95d09e1428bcd5b6e800f10d226 257 Gene3D G3DSA:1.10.10.10 1 74 8.9E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5988 35bcc95d09e1428bcd5b6e800f10d226 257 Gene3D G3DSA:1.20.120.530 96 254 9.8E-29 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_5988 35bcc95d09e1428bcd5b6e800f10d226 257 Pfam PF07729 FCD domain 99 229 6.5E-27 T 12-10-2018 IPR011711 GntR, C-terminal PA257_5988 35bcc95d09e1428bcd5b6e800f10d226 257 SMART SM00895 99 230 2.6E-21 T 12-10-2018 IPR011711 GntR, C-terminal PA257_5988 35bcc95d09e1428bcd5b6e800f10d226 257 SUPERFAMILY SSF46785 6 76 1.04E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5988 35bcc95d09e1428bcd5b6e800f10d226 257 SUPERFAMILY SSF48008 96 237 2.62E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_5988 35bcc95d09e1428bcd5b6e800f10d226 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 4.7E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_5988 35bcc95d09e1428bcd5b6e800f10d226 257 SMART SM00345 15 74 4.9E-25 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_5988 35bcc95d09e1428bcd5b6e800f10d226 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.5E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_5988 35bcc95d09e1428bcd5b6e800f10d226 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.5E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 Pfam PF07085 DRTGG domain 223 335 2.4E-31 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 Pfam PF01515 Phosphate acetyl/butaryl transferase 380 695 6.8E-118 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 395 695 4.3E-125 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 PIRSF PIRSF006107 1 703 0.0 T 12-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 Gene3D G3DSA:3.40.50.10950 386 698 5.0E-130 T 12-10-2018 PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 SUPERFAMILY SSF75138 220 343 3.92E-25 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 Gene3D G3DSA:3.40.50.10750 518 671 5.0E-130 T 12-10-2018 PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 Gene3D G3DSA:3.40.1390.20 216 355 7.1E-18 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 Pfam PF13500 AAA domain 2 219 3.5E-33 T 12-10-2018 PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 SUPERFAMILY SSF52540 1 229 1.13E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 Gene3D G3DSA:3.40.50.300 1 215 5.0E-19 T 12-10-2018 PA257_5016 fae20079973ee081b6e5399ecd803a4c 704 SUPERFAMILY SSF53659 381 698 1.15E-88 T 12-10-2018 PA257_2071 bbf7b342b647aa85874da7d925755d4a 205 Gene3D G3DSA:3.40.30.10 2 195 8.9E-60 T 12-10-2018 PA257_2071 bbf7b342b647aa85874da7d925755d4a 205 Pfam PF14497 Glutathione S-transferase, C-terminal domain 125 194 8.5E-10 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_2071 bbf7b342b647aa85874da7d925755d4a 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 2.7E-9 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_2071 bbf7b342b647aa85874da7d925755d4a 205 SUPERFAMILY SSF52833 1 78 2.24E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2071 bbf7b342b647aa85874da7d925755d4a 205 Gene3D G3DSA:1.20.1050.10 82 186 8.9E-60 T 12-10-2018 PA257_2071 bbf7b342b647aa85874da7d925755d4a 205 SUPERFAMILY SSF47616 79 197 1.67E-23 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_6275 1e3688731b8492805ac252a3748461e9 199 Pfam PF07883 Cupin domain 127 193 5.0E-18 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_6275 1e3688731b8492805ac252a3748461e9 199 Gene3D G3DSA:2.60.120.10 108 198 3.9E-19 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_6275 1e3688731b8492805ac252a3748461e9 199 Gene3D G3DSA:1.10.260.40 17 84 4.8E-17 T 12-10-2018 PA257_6275 1e3688731b8492805ac252a3748461e9 199 SUPERFAMILY SSF47413 18 81 3.38E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_6275 1e3688731b8492805ac252a3748461e9 199 SMART SM00530 23 78 7.0E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_6275 1e3688731b8492805ac252a3748461e9 199 SUPERFAMILY SSF51182 86 197 1.92E-27 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_6275 1e3688731b8492805ac252a3748461e9 199 Pfam PF01381 Helix-turn-helix 24 78 4.4E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_3999 593c4af23b6a09f72659a5c2766d9cbd 162 SUPERFAMILY SSF89562 4 158 3.79E-52 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily PA257_3999 593c4af23b6a09f72659a5c2766d9cbd 162 Gene3D G3DSA:3.50.30.40 1 162 7.0E-69 T 12-10-2018 PA257_3999 593c4af23b6a09f72659a5c2766d9cbd 162 Pfam PF03737 Aldolase/RraA 5 153 3.2E-46 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PA257_3999 593c4af23b6a09f72659a5c2766d9cbd 162 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 7.3E-73 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 SMART SM00998 366 445 6.6E-26 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 8.6E-24 T 12-10-2018 IPR000362 Fumarate lyase family PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 8.6E-24 T 12-10-2018 IPR000362 Fumarate lyase family PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 8.6E-24 T 12-10-2018 IPR000362 Fumarate lyase family PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 8.6E-24 T 12-10-2018 IPR000362 Fumarate lyase family PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 SUPERFAMILY SSF48557 11 445 2.98E-116 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 Gene3D G3DSA:1.20.200.10 15 442 2.2E-146 T 12-10-2018 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 Pfam PF00206 Lyase 17 298 2.6E-41 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 15 444 3.9E-100 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 Pfam PF10397 Adenylosuccinate lyase C-terminus 367 442 5.7E-17 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 2.4E-10 T 12-10-2018 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.4E-10 T 12-10-2018 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 2.4E-10 T 12-10-2018 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 2.4E-10 T 12-10-2018 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 Gene3D G3DSA:1.10.40.30 364 433 2.2E-146 T 12-10-2018 PA257_1768 57c9e1155815c1a30c25a3774d74fd5c 477 Gene3D G3DSA:1.10.275.60 25 230 2.2E-146 T 12-10-2018 PA257_4638 d41e95e8406cf0412fa230f2279896d4 678 Gene3D G3DSA:1.20.245.10 190 675 1.6E-140 T 12-10-2018 PA257_4638 d41e95e8406cf0412fa230f2279896d4 678 PRINTS PR00087 Lipoxygenase signature 365 382 4.4E-8 T 12-10-2018 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 PA257_4638 d41e95e8406cf0412fa230f2279896d4 678 PRINTS PR00087 Lipoxygenase signature 347 364 4.4E-8 T 12-10-2018 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 PA257_4638 d41e95e8406cf0412fa230f2279896d4 678 PRINTS PR00087 Lipoxygenase signature 385 405 4.4E-8 T 12-10-2018 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 PA257_4638 d41e95e8406cf0412fa230f2279896d4 678 Gene3D G3DSA:3.10.450.60 243 366 1.6E-140 T 12-10-2018 PA257_4638 d41e95e8406cf0412fa230f2279896d4 678 SUPERFAMILY SSF48484 190 678 3.01E-136 T 12-10-2018 IPR036226 Lipoxigenase, C-terminal domain superfamily PA257_4638 d41e95e8406cf0412fa230f2279896d4 678 Pfam PF00305 Lipoxygenase 219 660 1.9E-59 T 12-10-2018 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 PA257_4638 d41e95e8406cf0412fa230f2279896d4 678 ProSitePatterns PS00081 Lipoxygenases iron-binding region signature 2. 392 402 - T 12-10-2018 IPR020834 Lipoxygenase, conserved site GO:0016702|GO:0046872|GO:0055114 PA257_4638 d41e95e8406cf0412fa230f2279896d4 678 ProSitePatterns PS00711 Lipoxygenases iron-binding region signature 1. 365 379 - T 12-10-2018 IPR020833 Lipoxygenase, iron binding site GO:0016702|GO:0046872|GO:0055114 PA257_5600 b9528b02e47fdfc43cfe0993a3c47cff 567 Gene3D G3DSA:3.40.50.300 295 567 1.4E-107 T 12-10-2018 PA257_5600 b9528b02e47fdfc43cfe0993a3c47cff 567 Gene3D G3DSA:3.30.300.160 66 144 6.1E-7 T 12-10-2018 PA257_5600 b9528b02e47fdfc43cfe0993a3c47cff 567 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 386 400 - T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_5600 b9528b02e47fdfc43cfe0993a3c47cff 567 SUPERFAMILY SSF52540 178 565 9.3E-100 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5600 b9528b02e47fdfc43cfe0993a3c47cff 567 SUPERFAMILY SSF160246 3 144 1.96E-34 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily PA257_5600 b9528b02e47fdfc43cfe0993a3c47cff 567 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 9 567 2.9E-258 T 12-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 PA257_5600 b9528b02e47fdfc43cfe0993a3c47cff 567 Pfam PF00437 Type II/IV secretion system protein 191 458 4.8E-93 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_5600 b9528b02e47fdfc43cfe0993a3c47cff 567 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 145 1.9E-13 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal PA257_5600 b9528b02e47fdfc43cfe0993a3c47cff 567 Gene3D G3DSA:3.30.450.90 163 291 1.3E-47 T 12-10-2018 PA257_1428 d2b6ab77f11202d958d961de6ac9a373 296 SUPERFAMILY SSF53807 11 279 5.1E-59 T 12-10-2018 PA257_1428 d2b6ab77f11202d958d961de6ac9a373 296 Pfam PF01497 Periplasmic binding protein 33 270 2.5E-36 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain PA257_1428 d2b6ab77f11202d958d961de6ac9a373 296 Gene3D G3DSA:3.40.50.1980 26 286 7.8E-79 T 12-10-2018 PA257_1428 d2b6ab77f11202d958d961de6ac9a373 296 Gene3D G3DSA:3.40.50.12260 165 269 7.8E-79 T 12-10-2018 PA257_1572 55042befdcd00d52edd3487cf3da297d 445 SMART SM00228 206 275 3.2E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_1572 55042befdcd00d52edd3487cf3da297d 445 SMART SM00228 109 181 1.3E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_1572 55042befdcd00d52edd3487cf3da297d 445 Pfam PF13180 PDZ domain 222 284 6.7E-10 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_1572 55042befdcd00d52edd3487cf3da297d 445 Pfam PF02163 Peptidase family M50 6 432 8.0E-83 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 PA257_1572 55042befdcd00d52edd3487cf3da297d 445 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 445 1.8E-122 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 PA257_1572 55042befdcd00d52edd3487cf3da297d 445 Gene3D G3DSA:2.30.42.10 217 304 3.7E-18 T 12-10-2018 PA257_1572 55042befdcd00d52edd3487cf3da297d 445 SUPERFAMILY SSF50156 82 181 5.39E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 PA257_1572 55042befdcd00d52edd3487cf3da297d 445 SUPERFAMILY SSF50156 203 285 1.97E-16 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 PA257_1572 55042befdcd00d52edd3487cf3da297d 445 Gene3D G3DSA:2.30.42.10 120 215 1.4E-29 T 12-10-2018 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 190 1.1E-65 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 PIRSF PIRSF500135 1 436 2.2E-249 T 12-10-2018 IPR028358 GDP-mannose 6-dehydrogenase GO:0042121|GO:0047919 KEGG: 00051+1.1.1.132|KEGG: 00520+1.1.1.132|MetaCyc: PWY-6073|MetaCyc: PWY-6082 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 SUPERFAMILY SSF51735 1 195 2.91E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 SUPERFAMILY SSF48179 204 300 7.48E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 298 2.2E-28 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 410 3.2E-131 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 Gene3D G3DSA:3.40.50.720 235 436 1.3E-76 T 12-10-2018 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 Gene3D G3DSA:3.40.50.720 1 202 4.6E-68 T 12-10-2018 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 405 2.3E-12 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 Gene3D G3DSA:1.20.5.170 203 234 6.9E-20 T 12-10-2018 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 SUPERFAMILY SSF52413 305 434 2.62E-25 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 PIRSF PIRSF000124 1 436 1.1E-145 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PA257_1743 0d850c5342cefa0f63a3bc0fdbab94e5 436 SMART SM00984 317 425 2.2E-19 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_3483 7b5c3d62b83394317c0e35325d60a655 399 SUPERFAMILY SSF46689 335 365 1.72E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3483 7b5c3d62b83394317c0e35325d60a655 399 Pfam PF13556 PucR C-terminal helix-turn-helix domain 332 386 5.3E-14 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain PA257_3483 7b5c3d62b83394317c0e35325d60a655 399 Gene3D G3DSA:1.10.10.2840 267 392 9.6E-17 T 12-10-2018 PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05860 haemagglutination activity domain 33 166 2.3E-33 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF13332 Haemagluttinin repeat 4722 4789 6.5E-8 T 12-10-2018 IPR025157 Hemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF13332 Haemagluttinin repeat 4791 4931 8.3E-11 T 12-10-2018 IPR025157 Hemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 618 667 2.7E-7 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 3221 3310 5.9E-5 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 3435 3496 88.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 2589 2647 2.4E-5 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 4535 4615 0.014 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 4618 4706 80.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 2282 2332 1.7E-4 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 3353 3428 0.018 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 216 292 1.2E-7 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 2100 2157 1.5E-6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 3788 3823 1.4 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 1870 1914 6.8E-5 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 1606 1680 0.011 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 3125 3174 9.1E-4 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 553 617 0.022 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 2169 2227 8.5E-6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 1329 1379 3.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 3847 3886 220.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 1385 1456 0.0014 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 1685 1738 2.1E-5 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 854 907 0.0034 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 3706 3773 2.3 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 2917 2968 0.23 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 469 534 4.1E-4 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 2701 2752 2.8E-6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 3497 3556 7.7 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 1924 1987 0.001 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 1753 1810 4.6E-6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 1269 1321 0.0015 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 1013 1082 2.3E-6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 2517 2574 0.23 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 2342 2405 0.065 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 407 460 2.6E-6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 2022 2097 0.0036 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 3011 3079 1.1E-6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Pfam PF05594 Haemagluttinin repeat 910 965 1.6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 Gene3D G3DSA:2.160.20.10 35 327 3.3E-99 T 12-10-2018 IPR012334 Pectin lyase fold PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 SUPERFAMILY SSF51126 45 318 1.73E-63 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 816 857 5.3E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1499 1539 2.4E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 440 480 0.024 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 938 978 2.9E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2044 2083 9.8E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 647 687 2.2E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2986 3026 6.1E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 898 937 0.38 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 523 563 6.6E-10 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 482 522 2.7E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1394 1433 3.3E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1167 1210 0.39 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2881 2920 2.0E-9 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 379 418 1.0E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 4672 4705 0.41 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3459 3491 0.8 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2312 2351 0.34 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2146 2184 8.0E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1790 1827 3.2E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2187 2227 1.8E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3540 3578 7.8E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1669 1706 8.6E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2333 2373 0.056 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2944 2984 0.047 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1211 1250 1.2E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3068 3098 0.0024 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2731 2770 1.7E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1313 1352 0.0032 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1689 1723 0.0031 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3132 3172 0.0025 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1874 1914 3.2E-8 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2292 2332 2.3E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1273 1311 0.0022 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1062 1102 2.3E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2815 2847 2.6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 858 890 0.019 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 796 835 1.2E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3783 3820 2.6E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 564 604 1.3E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3364 3407 0.048 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3027 3063 4.0E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1353 1393 1.5E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2923 2962 0.011 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2462 2501 1.0E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 4586 4623 0.0049 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2648 2687 7.8E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2566 2605 8.1E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3097 3130 5.9E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2607 2647 1.3E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3325 3362 3.2E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2773 2813 2.9E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 311 350 0.63 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1814 1850 0.0012 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1770 1810 7.1E-9 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 689 729 0.0081 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1104 1144 0.0084 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1231 1272 5.3E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3260 3299 4.2E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2690 2730 2.3E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 606 646 0.0021 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1938 1976 0.064 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3745 3781 0.0011 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2966 3004 0.0021 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2108 2141 0.56 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2417 2459 0.74 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1458 1498 1.9E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2228 2267 2.0E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1627 1666 3.4E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 979 1019 4.4E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3286 3321 0.054 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2270 2310 9.9E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3850 3884 0.39 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2008 2042 0.16 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1749 1789 3.8E-8 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2504 2542 5.7E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1021 1061 9.0E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 4605 4641 0.58 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3174 3215 0.037 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3408 3449 0.0014 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 419 460 6.6E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1915 1955 1.5E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3218 3258 5.9E-9 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2354 2393 0.029 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 752 795 0.64 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2836 2879 0.036 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 66 163 2.0E-17 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_3113 ebec6cc63626248012a714af5d77da4d 5595 SMART SM00912 47 168 4.7E-46 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_3287 44a5b11ac20873ad8efa803be349c6ee 186 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 6 177 4.7E-79 T 12-10-2018 IPR019912 FMN reductase, MsuE-like PA257_3287 44a5b11ac20873ad8efa803be349c6ee 186 SUPERFAMILY SSF52218 1 176 4.35E-34 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_3287 44a5b11ac20873ad8efa803be349c6ee 186 Pfam PF03358 NADPH-dependent FMN reductase 6 150 9.3E-30 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PA257_3287 44a5b11ac20873ad8efa803be349c6ee 186 Gene3D G3DSA:3.40.50.360 4 175 1.1E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_5495 38e6611789ca55449cf1e5ba409c361a 205 SUPERFAMILY SSF47616 78 204 2.27E-26 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_5495 38e6611789ca55449cf1e5ba409c361a 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 83 1.2E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_5495 38e6611789ca55449cf1e5ba409c361a 205 SUPERFAMILY SSF52833 6 104 1.1E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_5495 38e6611789ca55449cf1e5ba409c361a 205 Gene3D G3DSA:3.40.30.10 9 193 2.5E-75 T 12-10-2018 PA257_5495 38e6611789ca55449cf1e5ba409c361a 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 191 5.6E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_5495 38e6611789ca55449cf1e5ba409c361a 205 Gene3D G3DSA:1.20.1050.10 86 190 2.5E-75 T 12-10-2018 PA257_0045 db3307f297825b7e14487af6f3632c3e 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 263 38.076 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PA257_0045 db3307f297825b7e14487af6f3632c3e 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PA257_0045 db3307f297825b7e14487af6f3632c3e 268 Pfam PF00290 Tryptophan synthase alpha chain 8 263 1.2E-104 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PA257_0045 db3307f297825b7e14487af6f3632c3e 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 2.0E-81 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PA257_0045 db3307f297825b7e14487af6f3632c3e 268 SUPERFAMILY SSF51366 1 248 1.51E-92 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PA257_0045 db3307f297825b7e14487af6f3632c3e 268 Gene3D G3DSA:3.20.20.70 1 268 5.3E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2481 fd0de8030b319722cc853b442d1cfd7b 354 Gene3D G3DSA:1.10.287.470 110 189 2.2E-9 T 12-10-2018 PA257_2481 fd0de8030b319722cc853b442d1cfd7b 354 Gene3D G3DSA:1.10.287.470 80 109 3.8E-13 T 12-10-2018 PA257_2481 fd0de8030b319722cc853b442d1cfd7b 354 Gene3D G3DSA:2.40.50.100 50 79 3.8E-13 T 12-10-2018 PA257_2481 fd0de8030b319722cc853b442d1cfd7b 354 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 330 345 1.1E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_2481 fd0de8030b319722cc853b442d1cfd7b 354 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 1.1E-5 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_2481 fd0de8030b319722cc853b442d1cfd7b 354 SUPERFAMILY SSF111369 50 127 1.83E-10 T 12-10-2018 PA257_2481 fd0de8030b319722cc853b442d1cfd7b 354 Pfam PF00529 HlyD membrane-fusion protein of T1SS 291 342 8.6E-8 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_2481 fd0de8030b319722cc853b442d1cfd7b 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 290 3.9E-19 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_2481 fd0de8030b319722cc853b442d1cfd7b 354 Gene3D G3DSA:2.40.30.170 228 350 2.5E-35 T 12-10-2018 PA257_2481 fd0de8030b319722cc853b442d1cfd7b 354 SUPERFAMILY SSF111369 184 306 6.93E-13 T 12-10-2018 PA257_6352 24f05e2024447ae1715f753fc9a5aba0 309 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 8 134 3.6E-45 T 12-10-2018 IPR008769 Poly granule associated PA257_6352 24f05e2024447ae1715f753fc9a5aba0 309 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 17 134 5.4E-43 T 12-10-2018 IPR008769 Poly granule associated PA257_6352 24f05e2024447ae1715f753fc9a5aba0 309 PRINTS PR01217 Proline rich extensin signature 140 156 6.1E-9 T 12-10-2018 PA257_6352 24f05e2024447ae1715f753fc9a5aba0 309 PRINTS PR01217 Proline rich extensin signature 236 261 6.1E-9 T 12-10-2018 PA257_6352 24f05e2024447ae1715f753fc9a5aba0 309 PRINTS PR01217 Proline rich extensin signature 177 198 6.1E-9 T 12-10-2018 PA257_6352 24f05e2024447ae1715f753fc9a5aba0 309 PRINTS PR01217 Proline rich extensin signature 215 232 6.1E-9 T 12-10-2018 PA257_1548 b1110f07e5b76b5401027b5657b15dd9 834 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 14 812 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 PA257_1548 b1110f07e5b76b5401027b5657b15dd9 834 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 15 816 31.919 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 PA257_1548 b1110f07e5b76b5401027b5657b15dd9 834 SMART SM00563 304 431 9.4E-27 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_1548 b1110f07e5b76b5401027b5657b15dd9 834 SUPERFAMILY SSF69593 263 523 7.19E-32 T 12-10-2018 PA257_1548 b1110f07e5b76b5401027b5657b15dd9 834 Pfam PF01553 Acyltransferase 292 428 8.5E-20 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_1548 b1110f07e5b76b5401027b5657b15dd9 834 PIRSF PIRSF500064 4 829 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 PA257_1548 b1110f07e5b76b5401027b5657b15dd9 834 PIRSF PIRSF000437 21 827 0.0 T 12-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 PA257_1865 c4a090a3e276c9090f045ca7addcd625 205 PIRSF PIRSF019876 1 205 3.4E-93 T 12-10-2018 IPR010495 Haem-binding HasA PA257_1865 c4a090a3e276c9090f045ca7addcd625 205 SUPERFAMILY SSF54621 2 176 1.19E-63 T 12-10-2018 IPR036912 Haem-binding HasA superfamily PA257_1865 c4a090a3e276c9090f045ca7addcd625 205 Pfam PF06438 Heme-binding protein A (HasA) 1 205 2.7E-77 T 12-10-2018 IPR010495 Haem-binding HasA PA257_1865 c4a090a3e276c9090f045ca7addcd625 205 Gene3D G3DSA:3.30.1500.10 1 184 1.2E-79 T 12-10-2018 IPR036912 Haem-binding HasA superfamily PA257_2829 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 Pfam PF13411 MerR HTH family regulatory protein 1 68 2.6E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2829 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 SMART SM00422 1 69 3.0E-20 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2829 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 SUPERFAMILY SSF46955 1 111 1.61E-24 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_2829 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2829 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2829 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 6.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2829 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 Gene3D G3DSA:1.10.1660.10 1 123 1.3E-24 T 12-10-2018 PA257_2829 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_6850 edc540381de5edd97f110cf426d5b898 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 35 56 4.6E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_6850 edc540381de5edd97f110cf426d5b898 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 4.6E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_6850 edc540381de5edd97f110cf426d5b898 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 146 170 4.6E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_6850 edc540381de5edd97f110cf426d5b898 265 Pfam PF01061 ABC-2 type transporter 20 225 8.1E-29 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PA257_2850 376a278c60516c90348b2b9eac43fb2d 659 Pfam PF07969 Amidohydrolase family 97 579 4.0E-120 T 12-10-2018 IPR013108 Amidohydrolase 3 PA257_2850 376a278c60516c90348b2b9eac43fb2d 659 Gene3D G3DSA:3.20.20.140 109 538 4.4E-94 T 12-10-2018 PA257_2850 376a278c60516c90348b2b9eac43fb2d 659 SUPERFAMILY SSF51338 42 584 3.46E-26 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_2850 376a278c60516c90348b2b9eac43fb2d 659 Gene3D G3DSA:3.10.310.70 128 239 4.4E-94 T 12-10-2018 PA257_2850 376a278c60516c90348b2b9eac43fb2d 659 Gene3D G3DSA:2.30.40.10 56 554 4.4E-94 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_2850 376a278c60516c90348b2b9eac43fb2d 659 SUPERFAMILY SSF51556 108 538 3.06E-43 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_6946 fdd7d62ab617d24f8287b14a413d311c 445 ProSitePatterns PS00483 Dihydroorotase signature 2. 307 318 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_6946 fdd7d62ab617d24f8287b14a413d311c 445 Gene3D G3DSA:3.20.20.140 56 412 1.7E-129 T 12-10-2018 PA257_6946 fdd7d62ab617d24f8287b14a413d311c 445 Pfam PF01979 Amidohydrolase family 51 125 6.0E-6 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_6946 fdd7d62ab617d24f8287b14a413d311c 445 Pfam PF01979 Amidohydrolase family 231 425 3.6E-6 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_6946 fdd7d62ab617d24f8287b14a413d311c 445 SUPERFAMILY SSF51338 1 433 6.81E-25 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_6946 fdd7d62ab617d24f8287b14a413d311c 445 Gene3D G3DSA:2.30.40.10 6 427 1.7E-129 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_6946 fdd7d62ab617d24f8287b14a413d311c 445 SUPERFAMILY SSF51556 55 371 2.96E-91 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_6712 2fa5d5d2c0b7a98bbab960710f16131d 464 PIRSF PIRSF000136 32 463 1.1E-89 T 12-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 PA257_6712 2fa5d5d2c0b7a98bbab960710f16131d 464 Gene3D G3DSA:3.30.465.10 103 227 6.2E-33 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_6712 2fa5d5d2c0b7a98bbab960710f16131d 464 Gene3D G3DSA:1.10.45.10 425 462 2.4E-7 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PA257_6712 2fa5d5d2c0b7a98bbab960710f16131d 464 Pfam PF01565 FAD binding domain 58 183 1.9E-22 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PA257_6712 2fa5d5d2c0b7a98bbab960710f16131d 464 Pfam PF04030 D-arabinono-1,4-lactone oxidase 208 458 3.7E-68 T 12-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 PA257_6712 2fa5d5d2c0b7a98bbab960710f16131d 464 Gene3D G3DSA:3.30.43.10 37 100 2.7E-19 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PA257_6712 2fa5d5d2c0b7a98bbab960710f16131d 464 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 41 462 8.9E-141 T 12-10-2018 PA257_6712 2fa5d5d2c0b7a98bbab960710f16131d 464 SUPERFAMILY SSF56176 37 211 9.35E-41 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_6712 2fa5d5d2c0b7a98bbab960710f16131d 464 Gene3D G3DSA:3.30.70.2520 332 424 1.0E-23 T 12-10-2018 PA257_2410 93db9fa1107f5fa95e0eaa84281386dc 269 SUPERFAMILY SSF103088 149 258 4.32E-36 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_2410 93db9fa1107f5fa95e0eaa84281386dc 269 Pfam PF00691 OmpA family 157 252 5.3E-23 T 12-10-2018 IPR006665 OmpA-like domain PA257_2410 93db9fa1107f5fa95e0eaa84281386dc 269 Gene3D G3DSA:3.30.1330.60 121 266 2.5E-41 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_2410 93db9fa1107f5fa95e0eaa84281386dc 269 Pfam PF14346 Domain of unknown function (DUF4398) 15 115 2.2E-20 T 12-10-2018 IPR025511 Domain of unknown function DUF4398 PA257_2410 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 241 261 1.1E-5 T 12-10-2018 PA257_2410 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 221 240 1.1E-5 T 12-10-2018 PA257_2410 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 203 220 1.1E-5 T 12-10-2018 PA257_2410 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01021 OMPA domain signature 203 219 6.3E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_2410 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01021 OMPA domain signature 158 180 6.3E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_2410 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01021 OMPA domain signature 188 203 6.3E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_5522 ec027a4df7f456370ca9619c58b076f9 157 Pfam PF02470 MlaD protein 38 116 2.1E-20 T 12-10-2018 IPR003399 Mce/MlaD PA257_5522 ec027a4df7f456370ca9619c58b076f9 157 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 8.6E-54 T 12-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PA257_4423 d64c2043c5108ed15461746ed95de71d 422 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 419 8.8E-163 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 PA257_4423 d64c2043c5108ed15461746ed95de71d 422 SUPERFAMILY SSF53901 3 261 1.15E-73 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4423 d64c2043c5108ed15461746ed95de71d 422 Gene3D G3DSA:3.40.47.10 1 264 1.9E-84 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4423 d64c2043c5108ed15461746ed95de71d 422 PIRSF PIRSF000447 1 422 4.4E-161 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 PA257_4423 d64c2043c5108ed15461746ed95de71d 422 SMART SM00825 Beta-ketoacyl synthase 5 421 4.6E-13 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PA257_4423 d64c2043c5108ed15461746ed95de71d 422 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 163 179 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site PA257_4423 d64c2043c5108ed15461746ed95de71d 422 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 377 2.7E-32 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal PA257_4423 d64c2043c5108ed15461746ed95de71d 422 Gene3D G3DSA:3.40.47.10 270 422 3.5E-50 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4423 d64c2043c5108ed15461746ed95de71d 422 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 256 2.8E-60 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal PA257_4423 d64c2043c5108ed15461746ed95de71d 422 SUPERFAMILY SSF53901 223 421 3.42E-64 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3050 3f60db454586883fe5615237b69c4ee8 484 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 168 399 1.5E-41 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_3050 3f60db454586883fe5615237b69c4ee8 484 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 162 471 4.2E-44 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_3050 3f60db454586883fe5615237b69c4ee8 484 Gene3D G3DSA:1.10.287.470 219 290 3.7E-79 T 12-10-2018 PA257_3050 3f60db454586883fe5615237b69c4ee8 484 SUPERFAMILY SSF111369 181 404 1.7E-22 T 12-10-2018 PA257_3050 3f60db454586883fe5615237b69c4ee8 484 Gene3D G3DSA:2.40.420.20 160 463 3.7E-79 T 12-10-2018 PA257_3050 3f60db454586883fe5615237b69c4ee8 484 Gene3D G3DSA:2.40.30.170 171 406 3.7E-79 T 12-10-2018 PA257_3050 3f60db454586883fe5615237b69c4ee8 484 Gene3D G3DSA:2.40.50.100 185 326 3.7E-79 T 12-10-2018 PA257_0252 e88cdd44fb4dfda79e895d44ba912efc 179 Gene3D G3DSA:1.10.260.40 1 67 1.9E-18 T 12-10-2018 PA257_0252 e88cdd44fb4dfda79e895d44ba912efc 179 Pfam PF07883 Cupin domain 118 174 1.3E-13 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_0252 e88cdd44fb4dfda79e895d44ba912efc 179 SUPERFAMILY SSF51182 67 175 5.63E-24 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_0252 e88cdd44fb4dfda79e895d44ba912efc 179 SUPERFAMILY SSF47413 3 66 5.09E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_0252 e88cdd44fb4dfda79e895d44ba912efc 179 Pfam PF01381 Helix-turn-helix 5 59 2.1E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_0252 e88cdd44fb4dfda79e895d44ba912efc 179 SMART SM00530 4 59 3.9E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_0252 e88cdd44fb4dfda79e895d44ba912efc 179 Gene3D G3DSA:2.60.120.10 68 175 1.0E-21 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4421 0a42965bf5ed7908b2e57695adc6428d 380 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 363 45.118 T 12-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 PA257_4421 0a42965bf5ed7908b2e57695adc6428d 380 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PA257_4421 0a42965bf5ed7908b2e57695adc6428d 380 SUPERFAMILY SSF52283 5 103 1.23E-15 T 12-10-2018 PA257_4421 0a42965bf5ed7908b2e57695adc6428d 380 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 277 9.8E-15 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PA257_4421 0a42965bf5ed7908b2e57695adc6428d 380 Gene3D G3DSA:3.40.50.720 2 275 4.0E-115 T 12-10-2018 PA257_4421 0a42965bf5ed7908b2e57695adc6428d 380 Pfam PF11890 Domain of unknown function (DUF3410) 290 376 2.6E-22 T 12-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 PA257_4421 0a42965bf5ed7908b2e57695adc6428d 380 Gene3D G3DSA:3.40.50.720 92 257 4.0E-115 T 12-10-2018 PA257_4421 0a42965bf5ed7908b2e57695adc6428d 380 SUPERFAMILY SSF51735 91 258 4.02E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4421 0a42965bf5ed7908b2e57695adc6428d 380 Gene3D G3DSA:3.30.1370.170 293 380 5.5E-39 T 12-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 PA257_4421 0a42965bf5ed7908b2e57695adc6428d 380 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 256 3.3E-35 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PA257_6773 358067f3f868811729db1db013ed01f4 312 Gene3D G3DSA:3.40.190.100 111 220 9.4E-100 T 12-10-2018 PA257_6773 358067f3f868811729db1db013ed01f4 312 Gene3D G3DSA:3.40.190.10 30 291 9.4E-100 T 12-10-2018 PA257_6773 358067f3f868811729db1db013ed01f4 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 281 1.1E-63 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PA257_6773 358067f3f868811729db1db013ed01f4 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 21 307 2.3E-149 T 12-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 PA257_6773 358067f3f868811729db1db013ed01f4 312 SUPERFAMILY SSF53850 21 298 3.53E-92 T 12-10-2018 PA257_3302 125060f7f7549a390d1e26dc27b5b811 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 357 378 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PA257_3302 125060f7f7549a390d1e26dc27b5b811 496 SUPERFAMILY SSF53067 5 255 6.8E-59 T 12-10-2018 PA257_3302 125060f7f7549a390d1e26dc27b5b811 496 Gene3D G3DSA:3.30.420.40 1 254 3.1E-73 T 12-10-2018 PA257_3302 125060f7f7549a390d1e26dc27b5b811 496 PIRSF PIRSF000538 2 495 2.8E-118 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PA257_3302 125060f7f7549a390d1e26dc27b5b811 496 SUPERFAMILY SSF53067 255 493 1.02E-55 T 12-10-2018 PA257_3302 125060f7f7549a390d1e26dc27b5b811 496 TIGRFAM TIGR01312 XylB: xylulokinase 6 492 6.3E-159 T 12-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 PA257_3302 125060f7f7549a390d1e26dc27b5b811 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 445 1.1E-31 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PA257_3302 125060f7f7549a390d1e26dc27b5b811 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 253 1.1E-61 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PA257_3302 125060f7f7549a390d1e26dc27b5b811 496 Gene3D G3DSA:3.30.420.40 257 491 1.1E-67 T 12-10-2018 PA257_3661 409772f139d01c3852549a71b30266f0 702 SUPERFAMILY SSF50447 272 412 3.31E-35 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_3661 409772f139d01c3852549a71b30266f0 702 Pfam PF00679 Elongation factor G C-terminus 609 694 2.0E-30 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like PA257_3661 409772f139d01c3852549a71b30266f0 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site PA257_3661 409772f139d01c3852549a71b30266f0 702 SMART SM00889 488 607 1.2E-69 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PA257_3661 409772f139d01c3852549a71b30266f0 702 SUPERFAMILY SSF54980 612 697 1.77E-28 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_3661 409772f139d01c3852549a71b30266f0 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 111.122 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_3661 409772f139d01c3852549a71b30266f0 702 SUPERFAMILY SSF52540 6 288 1.59E-102 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3661 409772f139d01c3852549a71b30266f0 702 Gene3D G3DSA:3.30.70.240 613 683 5.4E-89 T 12-10-2018 PA257_3661 409772f139d01c3852549a71b30266f0 702 Gene3D G3DSA:3.30.230.10 492 696 5.4E-89 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_3661 409772f139d01c3852549a71b30266f0 702 SMART SM00838 609 696 3.3E-56 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like PA257_3661 409772f139d01c3852549a71b30266f0 702 Pfam PF00009 Elongation factor Tu GTP binding domain 10 288 2.2E-61 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_3661 409772f139d01c3852549a71b30266f0 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 700 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_3661 409772f139d01c3852549a71b30266f0 702 SUPERFAMILY SSF54211 487 607 6.57E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_3661 409772f139d01c3852549a71b30266f0 702 Gene3D G3DSA:2.40.30.10 295 408 2.6E-47 T 12-10-2018 PA257_3661 409772f139d01c3852549a71b30266f0 702 PRINTS PR00315 GTP-binding elongation factor signature 86 96 1.6E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_3661 409772f139d01c3852549a71b30266f0 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_3661 409772f139d01c3852549a71b30266f0 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.6E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_3661 409772f139d01c3852549a71b30266f0 702 PRINTS PR00315 GTP-binding elongation factor signature 102 113 1.6E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_3661 409772f139d01c3852549a71b30266f0 702 PRINTS PR00315 GTP-binding elongation factor signature 138 147 1.6E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_3661 409772f139d01c3852549a71b30266f0 702 Pfam PF14492 Elongation Factor G, domain II 412 486 6.4E-35 T 12-10-2018 PA257_3661 409772f139d01c3852549a71b30266f0 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 188 8.6E-35 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_3661 409772f139d01c3852549a71b30266f0 702 Pfam PF03764 Elongation factor G, domain IV 487 605 4.5E-44 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PA257_3661 409772f139d01c3852549a71b30266f0 702 Gene3D G3DSA:3.40.50.300 1 294 2.9E-110 T 12-10-2018 PA257_3661 409772f139d01c3852549a71b30266f0 702 SUPERFAMILY SSF54980 412 489 5.04E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_3661 409772f139d01c3852549a71b30266f0 702 Pfam PF03144 Elongation factor Tu domain 2 332 399 7.9E-17 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PA257_3661 409772f139d01c3852549a71b30266f0 702 Gene3D G3DSA:3.30.70.870 413 488 9.2E-34 T 12-10-2018 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 Pfam PF01627 Hpt domain 11 101 1.3E-14 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 Gene3D G3DSA:1.20.120.160 3 133 1.2E-24 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 Gene3D G3DSA:3.40.50.12740 645 768 4.3E-33 T 12-10-2018 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 3.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 484 3.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 3.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 SUPERFAMILY SSF47226 8 118 3.14E-24 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 SUPERFAMILY SSF52172 644 764 4.7E-31 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 SMART SM00387 344 487 9.9E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 SUPERFAMILY SSF55874 303 485 3.41E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 Pfam PF01584 CheW-like domain 493 621 1.4E-18 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 Gene3D G3DSA:2.40.50.180 510 573 6.0E-27 T 12-10-2018 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 SMART SM00448 646 760 4.4E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 Pfam PF00072 Response regulator receiver domain 648 759 1.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 SMART SM00260 479 618 3.0E-11 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 SUPERFAMILY SSF50341 486 618 5.89E-25 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 SMART SM00073 8 105 3.4E-14 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 486 7.0E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 Gene3D G3DSA:2.30.30.40 487 614 6.0E-27 T 12-10-2018 PA257_1517 ea8837276de24ff59a21ade8d75c070c 769 Gene3D G3DSA:3.30.565.10 298 486 1.9E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2549 71e5aa575c973bef7691127899e5b645 561 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 130 139 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_2549 71e5aa575c973bef7691127899e5b645 561 Gene3D G3DSA:3.30.1360.70 1 110 7.5E-21 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2549 71e5aa575c973bef7691127899e5b645 561 SMART SM00836 444 561 7.8E-49 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PA257_2549 71e5aa575c973bef7691127899e5b645 561 Gene3D G3DSA:3.40.50.620 120 438 4.8E-148 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2549 71e5aa575c973bef7691127899e5b645 561 Pfam PF00750 tRNA synthetases class I (R) 101 409 8.8E-19 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 PA257_2549 71e5aa575c973bef7691127899e5b645 561 SMART SM01016 6 92 5.2E-29 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_2549 71e5aa575c973bef7691127899e5b645 561 Gene3D G3DSA:1.10.730.10 439 561 4.8E-148 T 12-10-2018 PA257_2549 71e5aa575c973bef7691127899e5b645 561 Pfam PF05746 DALR anticodon binding domain 444 561 1.1E-34 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PA257_2549 71e5aa575c973bef7691127899e5b645 561 SUPERFAMILY SSF52374 115 454 7.24E-81 T 12-10-2018 PA257_2549 71e5aa575c973bef7691127899e5b645 561 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 561 1.1E-118 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2549 71e5aa575c973bef7691127899e5b645 561 SUPERFAMILY SSF47323 439 561 7.85E-36 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_2549 71e5aa575c973bef7691127899e5b645 561 SUPERFAMILY SSF55190 5 112 3.14E-18 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2549 71e5aa575c973bef7691127899e5b645 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 1.5E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2549 71e5aa575c973bef7691127899e5b645 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 1.5E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2549 71e5aa575c973bef7691127899e5b645 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 1.5E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2549 71e5aa575c973bef7691127899e5b645 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 311 332 1.5E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2549 71e5aa575c973bef7691127899e5b645 561 Hamap MF_00123 Arginine--tRNA ligase [argS]. 2 561 23.973 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2549 71e5aa575c973bef7691127899e5b645 561 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 92 1.3E-19 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_6644 b7e0f21b4c2cc4c9884b4ff2c1074ae6 430 Gene3D G3DSA:1.10.3430.10 7 430 5.2E-141 T 12-10-2018 IPR029020 Ammonium/urea transporter PA257_6644 b7e0f21b4c2cc4c9884b4ff2c1074ae6 430 SUPERFAMILY SSF111352 17 409 1.7E-128 T 12-10-2018 PA257_6644 b7e0f21b4c2cc4c9884b4ff2c1074ae6 430 TIGRFAM TIGR00836 amt: ammonium transporter 21 428 1.1E-143 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PA257_6644 b7e0f21b4c2cc4c9884b4ff2c1074ae6 430 Pfam PF00909 Ammonium Transporter Family 23 428 1.2E-117 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PA257_6644 b7e0f21b4c2cc4c9884b4ff2c1074ae6 430 ProSitePatterns PS01219 Ammonium transporters signature. 186 211 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PA257_2490 7316100db997fa301212246dcbec6873 132 Gene3D G3DSA:2.170.150.20 2 132 1.8E-58 T 12-10-2018 PA257_2490 7316100db997fa301212246dcbec6873 132 SUPERFAMILY SSF51316 7 131 1.08E-56 T 12-10-2018 IPR011057 Mss4-like superfamily PA257_2490 7316100db997fa301212246dcbec6873 132 Pfam PF01641 SelR domain 11 128 2.4E-52 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PA257_2490 7316100db997fa301212246dcbec6873 132 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 9 131 4.0E-54 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PA257_2490 7316100db997fa301212246dcbec6873 132 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 37.608 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 SUPERFAMILY SSF69255 347 434 2.22E-33 T 12-10-2018 PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 Gene3D G3DSA:3.30.1920.30 222 280 1.0E-90 T 12-10-2018 PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 19 504 1.9E-178 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 23 486 7.8E-128 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 SUPERFAMILY SSF69349 424 616 6.36E-46 T 12-10-2018 PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 Gene3D G3DSA:3.55.50.10 96 187 1.0E-90 T 12-10-2018 PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 560 583 1.1E-6 T 12-10-2018 IPR010609 Gp5, C-terminal PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 SUPERFAMILY SSF69279 19 183 7.37E-49 T 12-10-2018 PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 Pfam PF05954 Phage late control gene D protein (GPD) 30 322 1.7E-84 T 12-10-2018 PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 SUPERFAMILY SSF69279 188 347 8.33E-37 T 12-10-2018 PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 Gene3D G3DSA:2.40.50.230 338 439 1.1E-43 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_3268 347aa5e94c698c473e6d9d03c0273121 668 Gene3D G3DSA:2.30.110.50 20 326 1.0E-90 T 12-10-2018 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 Gene3D G3DSA:1.10.8.60 316 380 9.5E-18 T 12-10-2018 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 Pfam PF08448 PAS fold 27 135 1.2E-15 T 12-10-2018 IPR013656 PAS fold-4 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 SUPERFAMILY SSF46689 385 458 6.81E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 SMART SM00382 166 308 1.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4610 796d0ff041f578f7e439755d82b3d067 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 459 4.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 439 4.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 Pfam PF00158 Sigma-54 interaction domain 150 309 2.8E-59 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 SUPERFAMILY SSF52540 155 384 3.75E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4610 796d0ff041f578f7e439755d82b3d067 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 Gene3D G3DSA:3.40.50.300 141 315 2.2E-56 T 12-10-2018 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 Gene3D G3DSA:3.30.450.20 22 129 7.6E-8 T 12-10-2018 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_4610 796d0ff041f578f7e439755d82b3d067 466 Gene3D G3DSA:1.10.10.60 398 460 1.2E-12 T 12-10-2018 PA257_4610 796d0ff041f578f7e439755d82b3d067 466 SUPERFAMILY SSF55785 22 124 1.34E-12 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4610 796d0ff041f578f7e439755d82b3d067 466 Pfam PF02954 Bacterial regulatory protein, Fis family 416 456 9.1E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_5008 e9363d19ce0f6bbb106f789eae8d03a3 406 SUPERFAMILY SSF53756 7 378 8.22E-76 T 12-10-2018 PA257_5008 e9363d19ce0f6bbb106f789eae8d03a3 406 Gene3D G3DSA:3.40.50.2000 9 181 1.3E-62 T 12-10-2018 PA257_5008 e9363d19ce0f6bbb106f789eae8d03a3 406 Gene3D G3DSA:3.40.50.2000 182 361 1.3E-62 T 12-10-2018 PA257_5008 e9363d19ce0f6bbb106f789eae8d03a3 406 Pfam PF13439 Glycosyltransferase Family 4 18 183 7.1E-28 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PA257_5008 e9363d19ce0f6bbb106f789eae8d03a3 406 Pfam PF00534 Glycosyl transferases group 1 194 356 5.4E-23 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 SUPERFAMILY SSF55874 362 531 3.14E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 530 1.7E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 Gene3D G3DSA:1.10.287.130 260 374 2.9E-28 T 12-10-2018 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 SMART SM00388 308 373 2.2E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 SUPERFAMILY SSF158472 255 305 8.5E-8 T 12-10-2018 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 485 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 1.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 SMART SM00387 422 533 4.9E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 Gene3D G3DSA:3.30.565.10 378 535 2.8E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 Pfam PF00672 HAMP domain 259 304 1.0E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 Pfam PF00512 His Kinase A (phospho-acceptor) domain 309 373 1.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 SUPERFAMILY SSF47384 291 373 4.71E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4649 6b35ac3debbb6e201be5cfe38a6bc4aa 538 SMART SM00304 255 307 1.4E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_1321 47acc981a902b4d9d6eca3f122d0bd42 203 Gene3D G3DSA:1.20.1050.10 80 202 7.3E-33 T 12-10-2018 PA257_1321 47acc981a902b4d9d6eca3f122d0bd42 203 Gene3D G3DSA:3.40.30.10 1 79 2.4E-19 T 12-10-2018 PA257_1321 47acc981a902b4d9d6eca3f122d0bd42 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 2.5E-20 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_1321 47acc981a902b4d9d6eca3f122d0bd42 203 SUPERFAMILY SSF47616 69 200 4.6E-7 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_1321 47acc981a902b4d9d6eca3f122d0bd42 203 SUPERFAMILY SSF52833 1 95 2.79E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2909 50059b43a6a948912fea92a729cf202f 166 Gene3D G3DSA:1.20.120.1200 1 161 2.2E-45 T 12-10-2018 PA257_2909 50059b43a6a948912fea92a729cf202f 166 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 159 5.1E-33 T 12-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_5796 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 SUPERFAMILY SSF81330 13 127 1.7E-35 T 12-10-2018 IPR036019 Gated mechanosensitive channel PA257_5796 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 12-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site PA257_5796 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 Gene3D G3DSA:1.10.1200.120 3 134 7.8E-42 T 12-10-2018 IPR036019 Gated mechanosensitive channel PA257_5796 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 7.3E-45 T 12-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L PA257_5796 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 133 6.0E-48 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PA257_5796 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 9.2E-13 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PA257_5796 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 9.2E-13 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PA257_5796 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 9.2E-13 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PA257_5796 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 24.315 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 Gene3D G3DSA:1.20.1640.10 14 509 5.2E-284 T 12-10-2018 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 Gene3D G3DSA:3.30.70.1320 139 330 5.2E-284 T 12-10-2018 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 SUPERFAMILY SSF82693 141 328 1.99E-23 T 12-10-2018 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 SUPERFAMILY SSF82714 710 789 6.8E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_4357 802270fb7851ea685e18669a5335f20d 1036 Pfam PF00873 AcrB/AcrD/AcrF family 9 1014 1.0E-295 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 Gene3D G3DSA:3.30.70.1440 654 853 5.2E-284 T 12-10-2018 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 Gene3D G3DSA:1.20.1640.10 510 1011 5.2E-284 T 12-10-2018 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 SUPERFAMILY SSF82693 45 129 1.1E-19 T 12-10-2018 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 Gene3D G3DSA:3.30.70.1430 44 803 5.2E-284 T 12-10-2018 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 SUPERFAMILY SSF82866 294 494 1.01E-44 T 12-10-2018 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 5.6E-60 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.6E-60 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 5.6E-60 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 5.6E-60 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 5.6E-60 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 609 623 5.6E-60 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 5.6E-60 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.6E-60 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 5.6E-60 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 SUPERFAMILY SSF82693 555 652 1.78E-13 T 12-10-2018 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 Gene3D G3DSA:3.30.2090.10 705 795 5.2E-284 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_4357 802270fb7851ea685e18669a5335f20d 1036 Gene3D G3DSA:3.30.2090.10 183 273 5.2E-284 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_4357 802270fb7851ea685e18669a5335f20d 1036 SUPERFAMILY SSF82714 187 267 2.62E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_4357 802270fb7851ea685e18669a5335f20d 1036 Gene3D G3DSA:3.30.70.1430 557 653 5.2E-284 T 12-10-2018 PA257_4357 802270fb7851ea685e18669a5335f20d 1036 SUPERFAMILY SSF82866 794 1018 2.09E-44 T 12-10-2018 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 SUPERFAMILY SSF52540 581 878 6.68E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 325 337 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 234 367 2.3E-9 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 Pfam PF07724 AAA domain (Cdc48 subfamily) 631 797 3.4E-38 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 888 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 Gene3D G3DSA:1.10.1780.10 1 161 1.5E-44 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 SMART SM01086 804 896 6.8E-11 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 SMART SM00382 229 370 4.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 SMART SM00382 632 775 2.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 681 699 4.6E-30 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 728 4.6E-30 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 743 757 4.6E-30 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 636 654 4.6E-30 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 Gene3D G3DSA:3.40.50.300 375 579 5.4E-45 T 12-10-2018 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 Gene3D G3DSA:3.40.50.300 183 373 1.2E-63 T 12-10-2018 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 804 878 1.6E-12 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 Gene3D G3DSA:1.10.8.60 804 900 2.6E-9 T 12-10-2018 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 SUPERFAMILY SSF81923 12 133 1.41E-17 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 Gene3D G3DSA:3.40.50.300 585 802 3.3E-65 T 12-10-2018 PA257_0111 580bed59d5d2d2f6df6c3636cfd06c4f 902 SUPERFAMILY SSF52540 190 520 7.45E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0849 fc08e04c3799517c32a377844260ffc9 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 164 2.6E-65 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PA257_0849 fc08e04c3799517c32a377844260ffc9 166 SUPERFAMILY SSF54211 81 160 7.33E-26 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_0849 fc08e04c3799517c32a377844260ffc9 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 33.768 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PA257_0849 fc08e04c3799517c32a377844260ffc9 166 SUPERFAMILY SSF54768 10 77 1.05E-22 T 12-10-2018 PA257_0849 fc08e04c3799517c32a377844260ffc9 166 Gene3D G3DSA:3.30.160.20 1 74 2.9E-29 T 12-10-2018 PA257_0849 fc08e04c3799517c32a377844260ffc9 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 75 7.0E-27 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 PA257_0849 fc08e04c3799517c32a377844260ffc9 166 Gene3D G3DSA:3.30.230.10 75 166 1.8E-36 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_0849 fc08e04c3799517c32a377844260ffc9 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site PA257_0849 fc08e04c3799517c32a377844260ffc9 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 158 8.7E-31 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 PA257_1962 24856a9bd091eb09bb6075e265c8c346 267 SMART SM00382 28 224 1.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1962 24856a9bd091eb09bb6075e265c8c346 267 Pfam PF00005 ABC transporter 19 174 7.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1962 24856a9bd091eb09bb6075e265c8c346 267 SUPERFAMILY SSF52540 4 234 4.62E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1962 24856a9bd091eb09bb6075e265c8c346 267 Gene3D G3DSA:3.40.50.300 1 252 1.3E-50 T 12-10-2018 PA257_1962 24856a9bd091eb09bb6075e265c8c346 267 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6908 0ed14729b9fcf24666b8e7724767fa08 217 Gene3D G3DSA:3.40.50.850 6 215 5.8E-53 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_6908 0ed14729b9fcf24666b8e7724767fa08 217 Pfam PF00857 Isochorismatase family 19 199 1.4E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_6908 0ed14729b9fcf24666b8e7724767fa08 217 SUPERFAMILY SSF52499 7 209 2.75E-48 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_5773 718b65be396ed7294e20f09ba7993b28 228 SUPERFAMILY SSF52540 1 221 3.1E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5773 718b65be396ed7294e20f09ba7993b28 228 Pfam PF00005 ABC transporter 21 169 2.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_5773 718b65be396ed7294e20f09ba7993b28 228 SMART SM00382 30 218 7.2E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5773 718b65be396ed7294e20f09ba7993b28 228 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_5773 718b65be396ed7294e20f09ba7993b28 228 Gene3D G3DSA:3.40.50.300 1 226 1.3E-64 T 12-10-2018 PA257_0441 b734b6225dcdeea40306f9e2aa4654b3 476 Gene3D G3DSA:3.40.605.10 26 446 9.2E-157 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_0441 b734b6225dcdeea40306f9e2aa4654b3 476 Gene3D G3DSA:3.40.309.10 228 426 9.2E-157 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_0441 b734b6225dcdeea40306f9e2aa4654b3 476 Pfam PF00171 Aldehyde dehydrogenase family 17 445 5.9E-88 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_0441 b734b6225dcdeea40306f9e2aa4654b3 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_0441 b734b6225dcdeea40306f9e2aa4654b3 476 PIRSF PIRSF036492 6 476 2.4E-168 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 PA257_0441 b734b6225dcdeea40306f9e2aa4654b3 476 SUPERFAMILY SSF53720 13 472 2.23E-119 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SMART SM00062 56 275 9.7E-18 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SMART SM00062 298 520 6.5E-26 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 577 692 4.7E-12 T 12-10-2018 IPR000014 PAS domain PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Gene3D G3DSA:3.30.565.10 777 940 1.2E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SUPERFAMILY SSF47384 692 776 1.43E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SMART SM00388 709 775 8.3E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SUPERFAMILY SSF47226 1057 1182 5.23E-18 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Gene3D G3DSA:3.30.450.20 560 698 5.1E-18 T 12-10-2018 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Gene3D G3DSA:3.40.190.10 384 479 1.5E-59 T 12-10-2018 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SUPERFAMILY SSF53850 292 519 3.34E-39 T 12-10-2018 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SUPERFAMILY SSF52172 956 1076 1.57E-33 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 300 516 7.2E-31 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Pfam PF00072 Response regulator receiver domain 960 1074 3.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Gene3D G3DSA:3.40.190.10 289 516 1.5E-59 T 12-10-2018 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SUPERFAMILY SSF53850 48 274 2.55E-32 T 12-10-2018 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Pfam PF00512 His Kinase A (phospho-acceptor) domain 709 775 1.9E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SMART SM00448 958 1074 2.9E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Gene3D G3DSA:3.40.190.10 46 271 4.3E-47 T 12-10-2018 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Gene3D G3DSA:3.40.50.2300 950 1075 9.7E-36 T 12-10-2018 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 64 273 1.1E-25 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 877 1.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 897 915 1.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 881 891 1.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 921 934 1.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Gene3D G3DSA:3.40.190.10 141 234 4.3E-47 T 12-10-2018 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Gene3D G3DSA:1.20.120.160 1100 1205 2.4E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 823 935 2.4E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Pfam PF01627 Hpt domain 1121 1178 9.6E-9 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Gene3D G3DSA:1.10.287.130 699 776 4.8E-21 T 12-10-2018 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SMART SM00091 574 642 0.0017 T 12-10-2018 IPR000014 PAS domain PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SUPERFAMILY SSF55785 559 687 6.46E-18 T 12-10-2018 IPR035965 PAS domain superfamily PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 Pfam PF08448 PAS fold 583 690 3.9E-12 T 12-10-2018 IPR013656 PAS fold-4 PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SMART SM00387 822 937 1.1E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1210 106cb150b882fdd193bf3639d211dbb0 1212 SUPERFAMILY SSF55874 765 935 6.94E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3907 d0b63ff9094e5839b42a2539097fed58 389 SUPERFAMILY SSF103473 5 384 1.44E-33 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3907 d0b63ff9094e5839b42a2539097fed58 389 Pfam PF07690 Major Facilitator Superfamily 252 380 3.5E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3907 d0b63ff9094e5839b42a2539097fed58 389 Pfam PF07690 Major Facilitator Superfamily 11 240 1.8E-9 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3907 d0b63ff9094e5839b42a2539097fed58 389 Gene3D G3DSA:1.20.1250.20 3 383 1.1E-26 T 12-10-2018 PA257_6061 48c7ca033e33c1815688dc0c2430068d 101 PIRSF PIRSF029826 1 101 1.4E-35 T 12-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 PA257_6061 48c7ca033e33c1815688dc0c2430068d 101 SUPERFAMILY SSF101386 1 99 2.94E-30 T 12-10-2018 PA257_6061 48c7ca033e33c1815688dc0c2430068d 101 Pfam PF12643 MazG-like family 31 94 1.9E-7 T 12-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 PA257_6061 48c7ca033e33c1815688dc0c2430068d 101 Gene3D G3DSA:1.10.287.1080 1 101 8.4E-27 T 12-10-2018 PA257_4922 4048b13093f9fc7bd5377e4996778487 427 Pfam PF06057 Bacterial virulence protein (VirJ) 232 421 2.1E-81 T 12-10-2018 IPR010333 Bacterial virulence PA257_4922 4048b13093f9fc7bd5377e4996778487 427 SUPERFAMILY SSF53474 220 407 2.39E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4922 4048b13093f9fc7bd5377e4996778487 427 PIRSF PIRSF029063 3 426 3.8E-155 T 12-10-2018 IPR011225 Type IV secretory pathway, VirJ component PA257_4922 4048b13093f9fc7bd5377e4996778487 427 Gene3D G3DSA:3.40.50.1820 218 423 1.8E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6639 a8d8b70363707352c46e4d537310cced 458 SUPERFAMILY SSF53383 104 457 1.38E-86 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6639 a8d8b70363707352c46e4d537310cced 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.7E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6639 a8d8b70363707352c46e4d537310cced 458 Gene3D G3DSA:3.40.640.10 142 358 4.9E-86 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6639 a8d8b70363707352c46e4d537310cced 458 Pfam PF00155 Aminotransferase class I and II 107 446 8.4E-39 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_6639 a8d8b70363707352c46e4d537310cced 458 SMART SM00345 17 76 1.3E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6639 a8d8b70363707352c46e4d537310cced 458 Gene3D G3DSA:3.90.1150.10 109 447 4.9E-86 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_6639 a8d8b70363707352c46e4d537310cced 458 Gene3D G3DSA:1.10.10.10 1 77 1.9E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6639 a8d8b70363707352c46e4d537310cced 458 SUPERFAMILY SSF46785 6 86 2.31E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6755 a25ba2295316593eaacb6926553fffe4 558 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 290 550 2.0E-74 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 PA257_6755 a25ba2295316593eaacb6926553fffe4 558 Gene3D G3DSA:1.10.3720.10 304 552 1.9E-32 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6755 a25ba2295316593eaacb6926553fffe4 558 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 326 551 6.5E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_6755 a25ba2295316593eaacb6926553fffe4 558 SUPERFAMILY SSF161098 285 540 2.75E-37 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4170 e43356c7529a3ca0cc11e46420fdc0f1 309 Gene3D G3DSA:3.40.50.2300 133 305 1.1E-13 T 12-10-2018 PA257_6895 f46ab47ac7bf29bf4033db4061a33638 96 Gene3D G3DSA:2.20.130.30 22 96 3.2E-35 T 12-10-2018 PA257_6895 f46ab47ac7bf29bf4033db4061a33638 96 Pfam PF11191 Protein of unknown function (DUF2782) 22 96 7.4E-24 T 12-10-2018 IPR021357 Protein of unknown function DUF2782 PA257_1536 27e3a8e2d490c7904564710d9063a06c 226 Gene3D G3DSA:3.30.420.40 4 216 9.6E-91 T 12-10-2018 PA257_1536 27e3a8e2d490c7904564710d9063a06c 226 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 216 7.2E-62 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 PA257_1536 27e3a8e2d490c7904564710d9063a06c 226 Gene3D G3DSA:3.30.420.40 95 185 9.6E-91 T 12-10-2018 PA257_1536 27e3a8e2d490c7904564710d9063a06c 226 Pfam PF00814 Glycoprotease family 32 150 3.3E-28 T 12-10-2018 IPR000905 Gcp-like domain PA257_1536 27e3a8e2d490c7904564710d9063a06c 226 SUPERFAMILY SSF53067 4 106 3.11E-28 T 12-10-2018 PA257_1536 27e3a8e2d490c7904564710d9063a06c 226 SUPERFAMILY SSF53067 109 214 3.37E-25 T 12-10-2018 PA257_3650 31692525b91bad3e3bd7f37cb80bc313 213 Pfam PF04199 Putative cyclase 8 152 1.6E-17 T 12-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 PA257_3650 31692525b91bad3e3bd7f37cb80bc313 213 Hamap MF_01969 Kynurenine formamidase [kynB]. 5 209 45.094 T 12-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 PA257_3650 31692525b91bad3e3bd7f37cb80bc313 213 Gene3D G3DSA:3.50.30.50 1 213 6.9E-81 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 PA257_3650 31692525b91bad3e3bd7f37cb80bc313 213 TIGRFAM TIGR03035 trp_arylform: arylformamidase 5 209 1.5E-104 T 12-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 PA257_3650 31692525b91bad3e3bd7f37cb80bc313 213 SUPERFAMILY SSF102198 4 207 1.7E-59 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 PA257_6328 afb722fbbf83cb1f4e910c8d2c7ebbc2 553 Gene3D G3DSA:1.10.8.60 189 205 1.3E-9 T 12-10-2018 PA257_6328 afb722fbbf83cb1f4e910c8d2c7ebbc2 553 Pfam PF05036 Sporulation related domain 467 539 2.8E-11 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 PA257_6328 afb722fbbf83cb1f4e910c8d2c7ebbc2 553 Pfam PF13401 AAA domain 49 171 1.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6328 afb722fbbf83cb1f4e910c8d2c7ebbc2 553 SUPERFAMILY SSF52540 19 246 3.71E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6328 afb722fbbf83cb1f4e910c8d2c7ebbc2 553 Gene3D G3DSA:3.40.50.300 52 188 1.3E-9 T 12-10-2018 PA257_6328 afb722fbbf83cb1f4e910c8d2c7ebbc2 553 Gene3D G3DSA:3.30.70.1070 450 549 6.0E-28 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_6328 afb722fbbf83cb1f4e910c8d2c7ebbc2 553 SUPERFAMILY SSF110997 466 530 9.55E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_0006 b8b4e45ce3bc73b150218091b218b4ef 87 SUPERFAMILY SSF46689 2 68 7.53E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0006 b8b4e45ce3bc73b150218091b218b4ef 87 Pfam PF01527 Transposase 2 70 1.5E-22 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_4173 23c9e74eef828dca01a5eda3dbb07049 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.1E-47 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal PA257_4173 23c9e74eef828dca01a5eda3dbb07049 405 SUPERFAMILY SSF53901 213 403 2.72E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4173 23c9e74eef828dca01a5eda3dbb07049 405 SUPERFAMILY SSF53901 1 251 2.79E-63 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4173 23c9e74eef828dca01a5eda3dbb07049 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 2.0E-29 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal PA257_4173 23c9e74eef828dca01a5eda3dbb07049 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site PA257_4173 23c9e74eef828dca01a5eda3dbb07049 405 Gene3D G3DSA:3.40.47.10 258 403 1.4E-47 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4173 23c9e74eef828dca01a5eda3dbb07049 405 SMART SM00825 Beta-ketoacyl synthase 4 405 4.7E-13 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PA257_4173 23c9e74eef828dca01a5eda3dbb07049 405 Gene3D G3DSA:3.40.47.10 1 252 2.7E-63 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3399 5278680366a40c25a809e2a698f14b4e 350 SUPERFAMILY SSF52518 16 231 8.57E-67 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_3399 5278680366a40c25a809e2a698f14b4e 350 SUPERFAMILY SSF52922 218 348 2.88E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_3399 5278680366a40c25a809e2a698f14b4e 350 Pfam PF02780 Transketolase, C-terminal domain 224 340 2.4E-35 T 12-10-2018 IPR033248 Transketolase, C-terminal domain PA257_3399 5278680366a40c25a809e2a698f14b4e 350 SMART SM00861 17 192 9.1E-68 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_3399 5278680366a40c25a809e2a698f14b4e 350 Pfam PF02779 Transketolase, pyrimidine binding domain 16 191 2.8E-44 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_3399 5278680366a40c25a809e2a698f14b4e 350 Gene3D G3DSA:3.40.50.970 13 216 4.3E-94 T 12-10-2018 PA257_3399 5278680366a40c25a809e2a698f14b4e 350 Gene3D G3DSA:3.40.50.920 217 350 4.3E-56 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_3923 a12b767c3a1d27a9c1b3d2381a9c8910 145 Pfam PF14539 Domain of unknown function (DUF4442) 14 142 6.3E-52 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 PA257_3923 a12b767c3a1d27a9c1b3d2381a9c8910 145 SUPERFAMILY SSF54637 1 142 8.71E-29 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_3923 a12b767c3a1d27a9c1b3d2381a9c8910 145 Gene3D G3DSA:3.10.129.10 1 145 4.3E-54 T 12-10-2018 PA257_0631 59510506901cefadb49c7adce54d06ec 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0631 59510506901cefadb49c7adce54d06ec 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0631 59510506901cefadb49c7adce54d06ec 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0631 59510506901cefadb49c7adce54d06ec 305 Gene3D G3DSA:3.40.190.10 92 290 8.0E-46 T 12-10-2018 PA257_0631 59510506901cefadb49c7adce54d06ec 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.7E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0631 59510506901cefadb49c7adce54d06ec 305 Gene3D G3DSA:3.40.190.10 163 268 8.0E-46 T 12-10-2018 PA257_0631 59510506901cefadb49c7adce54d06ec 305 SUPERFAMILY SSF46785 2 112 2.04E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0631 59510506901cefadb49c7adce54d06ec 305 Gene3D G3DSA:1.10.10.10 1 82 2.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0631 59510506901cefadb49c7adce54d06ec 305 Pfam PF03466 LysR substrate binding domain 90 295 5.3E-45 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0631 59510506901cefadb49c7adce54d06ec 305 SUPERFAMILY SSF53850 91 295 6.15E-40 T 12-10-2018 PA257_5527 beaff7eaa9639a33ed04ece7c9ebd587 190 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 186 2.2E-52 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PA257_5527 beaff7eaa9639a33ed04ece7c9ebd587 190 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 5 190 25.906 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PA257_5527 beaff7eaa9639a33ed04ece7c9ebd587 190 Gene3D G3DSA:2.60.450.10 64 190 5.2E-15 T 12-10-2018 PA257_5527 beaff7eaa9639a33ed04ece7c9ebd587 190 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 188 6.4E-52 T 12-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related PA257_5135 520abb0d10010bd8c089737ab673336b 322 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 320 1.4E-137 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 PA257_5135 520abb0d10010bd8c089737ab673336b 322 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 15 321 53.019 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 PA257_5135 520abb0d10010bd8c089737ab673336b 322 Gene3D G3DSA:3.40.50.150 60 322 3.5E-22 T 12-10-2018 PA257_5135 520abb0d10010bd8c089737ab673336b 322 SUPERFAMILY SSF53335 91 322 9.07E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5135 520abb0d10010bd8c089737ab673336b 322 Pfam PF08003 Protein of unknown function (DUF1698) 12 321 3.3E-137 T 12-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 ProSitePatterns PS01068 OmpA-like domain. 276 321 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 SUPERFAMILY SSF103088 235 345 3.27E-39 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 Pfam PF05736 OprF membrane domain 1 188 2.2E-97 T 12-10-2018 IPR008722 Outer membrane porin F, N-terminal PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 SUPERFAMILY SSF56925 45 188 6.54E-17 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 Gene3D G3DSA:3.30.1330.60 222 350 2.1E-43 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 Gene3D G3DSA:2.40.160.20 15 184 1.4E-57 T 12-10-2018 PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 Pfam PF00691 OmpA family 244 339 2.0E-24 T 12-10-2018 IPR006665 OmpA-like domain PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 PRINTS PR01021 OMPA domain signature 244 266 7.4E-18 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 PRINTS PR01021 OMPA domain signature 289 305 7.4E-18 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 PRINTS PR01021 OMPA domain signature 274 289 7.4E-18 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_3994 171eacef143b342c9f2b7bca29db9fc0 350 SUPERFAMILY SSF103647 198 232 4.84E-7 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 PA257_2353 5f4249cf80eab732d2bd59dbc98cb6ab 551 Gene3D G3DSA:3.30.70.20 452 546 9.5E-38 T 12-10-2018 PA257_2353 5f4249cf80eab732d2bd59dbc98cb6ab 551 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 548 1.9E-50 T 12-10-2018 PA257_2353 5f4249cf80eab732d2bd59dbc98cb6ab 551 SUPERFAMILY SSF54373 212 307 2.86E-37 T 12-10-2018 PA257_2353 5f4249cf80eab732d2bd59dbc98cb6ab 551 SUPERFAMILY SSF51905 5 449 6.92E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2353 5f4249cf80eab732d2bd59dbc98cb6ab 551 Gene3D G3DSA:3.30.9.90 79 451 1.0E-198 T 12-10-2018 PA257_2353 5f4249cf80eab732d2bd59dbc98cb6ab 551 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.7E-7 T 12-10-2018 PA257_2353 5f4249cf80eab732d2bd59dbc98cb6ab 551 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 180 195 9.4E-7 T 12-10-2018 PA257_2353 5f4249cf80eab732d2bd59dbc98cb6ab 551 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 9.4E-7 T 12-10-2018 PA257_2353 5f4249cf80eab732d2bd59dbc98cb6ab 551 SUPERFAMILY SSF54862 451 551 9.11E-29 T 12-10-2018 PA257_2353 5f4249cf80eab732d2bd59dbc98cb6ab 551 Gene3D G3DSA:3.50.50.60 7 387 1.0E-198 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2422 dac1d76c08a73528bc74b4412bebbad7 538 Gene3D G3DSA:3.90.226.10 272 538 8.6E-94 T 12-10-2018 PA257_2422 dac1d76c08a73528bc74b4412bebbad7 538 Pfam PF01039 Carboxyl transferase domain 49 514 1.8E-115 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PA257_2422 dac1d76c08a73528bc74b4412bebbad7 538 SUPERFAMILY SSF52096 277 535 2.13E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_2422 dac1d76c08a73528bc74b4412bebbad7 538 Gene3D G3DSA:3.90.226.10 1 271 5.4E-73 T 12-10-2018 PA257_2422 dac1d76c08a73528bc74b4412bebbad7 538 SUPERFAMILY SSF52096 33 269 2.85E-58 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_3743 0ea028f90a9dc52de1a84ab4bd094fa9 92 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 PA257_3743 0ea028f90a9dc52de1a84ab4bd094fa9 92 Gene3D G3DSA:3.10.50.40 3 91 1.1E-31 T 12-10-2018 PA257_3743 0ea028f90a9dc52de1a84ab4bd094fa9 92 SUPERFAMILY SSF54534 4 88 9.81E-27 T 12-10-2018 PA257_3743 0ea028f90a9dc52de1a84ab4bd094fa9 92 Pfam PF00639 PPIC-type PPIASE domain 12 88 3.2E-19 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 PA257_6204 222973e496c17a4427a433c030710b41 283 Gene3D G3DSA:2.30.30.60 130 179 5.0E-18 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PA257_6204 222973e496c17a4427a433c030710b41 283 Gene3D G3DSA:3.30.70.100 180 270 7.6E-7 T 12-10-2018 PA257_6204 222973e496c17a4427a433c030710b41 283 Pfam PF00924 Mechanosensitive ion channel 74 262 1.7E-36 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PA257_6204 222973e496c17a4427a433c030710b41 283 SUPERFAMILY SSF82861 29 112 1.11E-15 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PA257_6204 222973e496c17a4427a433c030710b41 283 SUPERFAMILY SSF50182 115 180 9.15E-16 T 12-10-2018 IPR010920 LSM domain superfamily PA257_6204 222973e496c17a4427a433c030710b41 283 SUPERFAMILY SSF82689 182 279 2.48E-16 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PA257_4582 6ab003239a40cad3ef9181e58226225f 295 Gene3D G3DSA:3.40.190.10 103 279 2.2E-37 T 12-10-2018 PA257_4582 6ab003239a40cad3ef9181e58226225f 295 Pfam PF03466 LysR substrate binding domain 95 282 1.1E-27 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4582 6ab003239a40cad3ef9181e58226225f 295 Gene3D G3DSA:1.10.10.10 7 95 1.2E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4582 6ab003239a40cad3ef9181e58226225f 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.7E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4582 6ab003239a40cad3ef9181e58226225f 295 SUPERFAMILY SSF53850 95 285 1.99E-30 T 12-10-2018 PA257_4582 6ab003239a40cad3ef9181e58226225f 295 Gene3D G3DSA:3.40.190.10 163 253 2.2E-37 T 12-10-2018 PA257_4582 6ab003239a40cad3ef9181e58226225f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4582 6ab003239a40cad3ef9181e58226225f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4582 6ab003239a40cad3ef9181e58226225f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4582 6ab003239a40cad3ef9181e58226225f 295 SUPERFAMILY SSF46785 6 114 2.23E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3941 6c3fcdf09d5624e2616811294d287110 751 Gene3D G3DSA:3.90.100.10 628 751 7.3E-48 T 12-10-2018 PA257_3941 6c3fcdf09d5624e2616811294d287110 751 Gene3D G3DSA:3.90.1150.10 455 627 1.6E-67 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_3941 6c3fcdf09d5624e2616811294d287110 751 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 388 402 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 PA257_3941 6c3fcdf09d5624e2616811294d287110 751 SUPERFAMILY SSF53383 149 599 5.39E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3941 6c3fcdf09d5624e2616811294d287110 751 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 582 1.9E-160 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 PA257_3941 6c3fcdf09d5624e2616811294d287110 751 Gene3D G3DSA:3.40.50.2300 7 148 3.3E-32 T 12-10-2018 PA257_3941 6c3fcdf09d5624e2616811294d287110 751 Gene3D G3DSA:3.40.640.10 149 453 1.3E-97 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_3941 6c3fcdf09d5624e2616811294d287110 751 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 607 736 1.1E-48 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PA257_3941 6c3fcdf09d5624e2616811294d287110 751 PIRSF PIRSF009393 3 751 1.3E-289 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 PA257_3941 6c3fcdf09d5624e2616811294d287110 751 SUPERFAMILY SSF55904 602 751 4.18E-43 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 PA257_3941 6c3fcdf09d5624e2616811294d287110 751 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 22 143 5.6E-24 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 PA257_2389 58bf0c622666aaeb127ee6626ef0dbc3 317 Gene3D G3DSA:3.40.190.10 92 284 1.7E-47 T 12-10-2018 PA257_2389 58bf0c622666aaeb127ee6626ef0dbc3 317 SUPERFAMILY SSF46785 2 110 3.57E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2389 58bf0c622666aaeb127ee6626ef0dbc3 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2389 58bf0c622666aaeb127ee6626ef0dbc3 317 Gene3D G3DSA:1.10.10.10 1 89 4.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2389 58bf0c622666aaeb127ee6626ef0dbc3 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2389 58bf0c622666aaeb127ee6626ef0dbc3 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2389 58bf0c622666aaeb127ee6626ef0dbc3 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2389 58bf0c622666aaeb127ee6626ef0dbc3 317 Gene3D G3DSA:3.40.190.10 166 267 1.7E-47 T 12-10-2018 PA257_2389 58bf0c622666aaeb127ee6626ef0dbc3 317 SUPERFAMILY SSF53850 88 299 2.53E-31 T 12-10-2018 PA257_2389 58bf0c622666aaeb127ee6626ef0dbc3 317 Pfam PF03466 LysR substrate binding domain 87 294 3.4E-31 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1557 bb659f7a247be64ecb4462f5804477c8 115 Pfam PF03960 ArsC family 6 112 9.3E-19 T 12-10-2018 IPR006660 Arsenate reductase-like PA257_1557 bb659f7a247be64ecb4462f5804477c8 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 111 4.0E-31 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR PA257_1557 bb659f7a247be64ecb4462f5804477c8 115 Gene3D G3DSA:3.40.30.10 2 115 3.4E-47 T 12-10-2018 PA257_1557 bb659f7a247be64ecb4462f5804477c8 115 SUPERFAMILY SSF52833 3 114 4.21E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4574 74906732c53cfd3d6ccc59faa0d69e60 296 Gene3D G3DSA:3.30.200.20 7 90 2.1E-16 T 12-10-2018 PA257_4574 74906732c53cfd3d6ccc59faa0d69e60 296 SUPERFAMILY SSF56112 11 260 2.86E-19 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_4574 74906732c53cfd3d6ccc59faa0d69e60 296 Pfam PF01636 Phosphotransferase enzyme family 27 256 1.3E-25 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase PA257_4574 74906732c53cfd3d6ccc59faa0d69e60 296 Gene3D G3DSA:3.90.1200.10 96 274 5.8E-9 T 12-10-2018 PA257_4574 74906732c53cfd3d6ccc59faa0d69e60 296 PIRSF PIRSF000707 13 291 1.6E-9 T 12-10-2018 IPR016259 Hygromycin-B kinase PA257_6321 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 Pfam PF07690 Major Facilitator Superfamily 52 360 2.0E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6321 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 SUPERFAMILY SSF103473 40 424 1.31E-67 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6321 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 Gene3D G3DSA:1.20.1250.20 41 423 5.8E-54 T 12-10-2018 PA257_6321 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 102 118 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_3058 afe245778069cc37f7ab0c16d8ab59c8 163 SUPERFAMILY SSF54427 1 163 5.47E-51 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_3058 afe245778069cc37f7ab0c16d8ab59c8 163 Gene3D G3DSA:3.10.450.50 5 163 8.0E-45 T 12-10-2018 PA257_3058 afe245778069cc37f7ab0c16d8ab59c8 163 TIGRFAM TIGR03231 anthran_1_2_B: anthranilate 1,2-dioxygenase, small subunit 9 163 3.5E-95 T 12-10-2018 IPR017640 Anthranilate 1,2-dioxygenase, small subunit GO:0019439 KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 PA257_3058 afe245778069cc37f7ab0c16d8ab59c8 163 Pfam PF00866 Ring hydroxylating beta subunit 15 155 8.3E-48 T 12-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 PA257_6552 9ea9dc4796be49889408ed925fba373f 247 SMART SM00448 11 122 6.9E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6552 9ea9dc4796be49889408ed925fba373f 247 Gene3D G3DSA:3.40.50.2300 3 131 6.3E-40 T 12-10-2018 PA257_6552 9ea9dc4796be49889408ed925fba373f 247 SUPERFAMILY SSF46894 140 240 6.52E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_6552 9ea9dc4796be49889408ed925fba373f 247 Gene3D G3DSA:1.10.10.10 136 244 1.5E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6552 9ea9dc4796be49889408ed925fba373f 247 Pfam PF00072 Response regulator receiver domain 13 123 3.8E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6552 9ea9dc4796be49889408ed925fba373f 247 SMART SM00862 161 238 1.2E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_6552 9ea9dc4796be49889408ed925fba373f 247 SUPERFAMILY SSF52172 7 132 8.25E-43 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6552 9ea9dc4796be49889408ed925fba373f 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 238 3.5E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 SUPERFAMILY SSF52343 102 221 3.4E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 SUPERFAMILY SSF54292 209 316 5.51E-30 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 133 142 3.9E-48 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 187 195 3.9E-48 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 72 86 3.9E-48 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 26 36 3.9E-48 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 36 48 3.9E-48 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 108 127 3.9E-48 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 48 62 3.9E-48 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 86 100 3.9E-48 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 Gene3D G3DSA:2.40.30.10 1 97 3.9E-28 T 12-10-2018 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 Gene3D G3DSA:3.10.20.30 221 317 3.1E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 Gene3D G3DSA:3.40.50.80 98 219 5.1E-28 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 SUPERFAMILY SSF63380 2 96 1.96E-26 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 266 274 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PA257_6184 fdbba09747bab9d798ffd7174ada2f58 317 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 243 307 5.4E-13 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_1482 6458846b6e28ed42340cc963a0c4eea0 242 SUPERFAMILY SSF52833 96 236 1.16E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_1482 6458846b6e28ed42340cc963a0c4eea0 242 ProSitePatterns PS00194 Thioredoxin family active site. 122 140 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PA257_1482 6458846b6e28ed42340cc963a0c4eea0 242 SUPERFAMILY SSF54423 25 86 1.24E-13 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 PA257_1482 6458846b6e28ed42340cc963a0c4eea0 242 Pfam PF10411 Disulfide bond isomerase protein N-terminus 29 82 3.8E-18 T 12-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PA257_1482 6458846b6e28ed42340cc963a0c4eea0 242 Pfam PF13098 Thioredoxin-like domain 114 237 9.8E-27 T 12-10-2018 IPR012336 Thioredoxin-like fold PA257_1482 6458846b6e28ed42340cc963a0c4eea0 242 Gene3D G3DSA:3.40.30.10 109 241 8.3E-41 T 12-10-2018 PA257_1482 6458846b6e28ed42340cc963a0c4eea0 242 Gene3D G3DSA:3.10.450.70 21 87 8.8E-20 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 PA257_6555 9c73f2767c0975b9074f36cb7bf36a65 527 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 527 229.066 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PA257_6555 9c73f2767c0975b9074f36cb7bf36a65 527 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 517 1.1E-269 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PA257_6555 9c73f2767c0975b9074f36cb7bf36a65 527 SUPERFAMILY SSF55931 8 514 5.95E-196 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_6555 9c73f2767c0975b9074f36cb7bf36a65 527 Gene3D G3DSA:3.30.590.20 20 523 6.4E-195 T 12-10-2018 PA257_6555 9c73f2767c0975b9074f36cb7bf36a65 527 Pfam PF04262 Glutamate-cysteine ligase 10 377 1.3E-169 T 12-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PA257_6196 957835d665c4a0f54fd4e21126257d3a 200 Pfam PF01467 Cytidylyltransferase-like 28 156 4.9E-6 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PA257_6196 957835d665c4a0f54fd4e21126257d3a 200 Gene3D G3DSA:3.40.50.620 25 193 1.9E-27 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_6196 957835d665c4a0f54fd4e21126257d3a 200 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 27 61 4.9E-7 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PA257_6196 957835d665c4a0f54fd4e21126257d3a 200 SUPERFAMILY SSF52374 27 177 8.13E-22 T 12-10-2018 PA257_2784 e85f14787e089b35cccddb2c9b35a6f5 124 Gene3D G3DSA:3.30.160.370 1 122 2.1E-41 T 12-10-2018 PA257_2784 e85f14787e089b35cccddb2c9b35a6f5 124 Pfam PF16703 Domain of unknown function (DUF5064) 1 115 5.4E-46 T 12-10-2018 IPR032024 Protein of unknown function DUF5064 PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 Gene3D G3DSA:3.30.450.80 1 170 1.6E-53 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 SMART SM00421 171 228 8.9E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 188 2.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 216 2.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 204 2.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 SUPERFAMILY SSF75516 2 165 3.53E-39 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 Pfam PF03472 Autoinducer binding domain 19 155 5.7E-36 T 12-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 Gene3D G3DSA:1.10.10.10 172 234 1.8E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 174 228 2.1E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 ProSitePatterns PS00622 LuxR-type HTH domain signature. 188 215 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1791 2f5465f11d7a7514802f1ae0d7ffbf7f 234 SUPERFAMILY SSF46894 164 234 3.74E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_3828 e19254abe2c9a32976220e9ec8106a7c 115 Pfam PF05899 Protein of unknown function (DUF861) 41 111 1.6E-26 T 12-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PA257_3828 e19254abe2c9a32976220e9ec8106a7c 115 SUPERFAMILY SSF51182 29 113 8.19E-16 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_3828 e19254abe2c9a32976220e9ec8106a7c 115 Gene3D G3DSA:2.60.120.10 4 115 3.8E-26 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_6344 77301db8dc281daa634534dadb6fe4f5 163 Gene3D G3DSA:3.60.20.10 1 160 2.0E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_6344 77301db8dc281daa634534dadb6fe4f5 163 SUPERFAMILY SSF56235 1 159 2.09E-48 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_6344 77301db8dc281daa634534dadb6fe4f5 163 Pfam PF00227 Proteasome subunit 1 157 5.1E-16 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 PA257_6344 77301db8dc281daa634534dadb6fe4f5 163 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 1 159 3.8E-77 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PA257_4304 afd05aefe6653d737f75e6ef36056d5d 469 Gene3D G3DSA:1.10.10.1100 392 462 1.5E-17 T 12-10-2018 PA257_4304 afd05aefe6653d737f75e6ef36056d5d 469 Pfam PF01266 FAD dependent oxidoreductase 13 361 7.0E-56 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_4304 afd05aefe6653d737f75e6ef36056d5d 469 SUPERFAMILY SSF51905 12 381 8.2E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4304 afd05aefe6653d737f75e6ef36056d5d 469 Pfam PF04324 BFD-like [2Fe-2S] binding domain 400 451 8.1E-9 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain PA257_4304 afd05aefe6653d737f75e6ef36056d5d 469 Gene3D G3DSA:3.50.50.60 13 358 2.8E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4304 afd05aefe6653d737f75e6ef36056d5d 469 Gene3D G3DSA:3.30.9.10 96 325 2.8E-97 T 12-10-2018 PA257_4304 afd05aefe6653d737f75e6ef36056d5d 469 SUPERFAMILY SSF54373 229 323 2.22E-9 T 12-10-2018 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Gene3D G3DSA:3.40.50.300 540 779 7.9E-233 T 12-10-2018 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Gene3D G3DSA:3.30.2060.10 128 213 7.5E-123 T 12-10-2018 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF52540 780 988 7.92E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Gene3D G3DSA:3.40.50.300 476 987 7.9E-233 T 12-10-2018 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 SMART SM00487 598 788 3.1E-35 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Pfam PF00270 DEAD/DEAH box helicase 603 763 9.6E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 SMART SM00490 824 908 1.2E-15 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1079 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 SMART SM00982 1006 1106 2.3E-50 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 34 1104 28.033 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 SMART SM01058 477 574 1.2E-48 T 12-10-2018 IPR003711 CarD-like/TRCF domain PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Pfam PF00271 Helicase conserved C-terminal domain 804 907 5.2E-16 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Gene3D G3DSA:3.40.50.11140 355 451 4.9E-25 T 12-10-2018 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Gene3D G3DSA:2.30.30.840 481 539 7.9E-233 T 12-10-2018 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF52540 10 340 1.33E-107 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Gene3D G3DSA:3.40.50.11180 23 333 7.5E-123 T 12-10-2018 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Gene3D G3DSA:3.90.1150.50 1003 1147 1.3E-40 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF141259 469 546 5.36E-23 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF52540 351 464 3.56E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF52540 522 781 1.36E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Pfam PF02559 CarD-like/TRCF domain 478 573 2.6E-24 T 12-10-2018 IPR003711 CarD-like/TRCF domain PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 Pfam PF03461 TRCF domain 1007 1098 6.3E-27 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PA257_2301 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF143517 992 1144 1.01E-43 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain PA257_4488 a477bce4756ecb4b8bddef862ba29818 308 Pfam PF03466 LysR substrate binding domain 109 306 1.9E-37 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4488 a477bce4756ecb4b8bddef862ba29818 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 83 3.5E-23 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4488 a477bce4756ecb4b8bddef862ba29818 308 SUPERFAMILY SSF53850 109 306 6.83E-32 T 12-10-2018 PA257_4488 a477bce4756ecb4b8bddef862ba29818 308 Gene3D G3DSA:1.10.10.10 23 114 4.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4488 a477bce4756ecb4b8bddef862ba29818 308 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 27 306 1.7E-121 T 12-10-2018 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type PA257_4488 a477bce4756ecb4b8bddef862ba29818 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 4.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4488 a477bce4756ecb4b8bddef862ba29818 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 4.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4488 a477bce4756ecb4b8bddef862ba29818 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4488 a477bce4756ecb4b8bddef862ba29818 308 SUPERFAMILY SSF46785 22 103 9.54E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4488 a477bce4756ecb4b8bddef862ba29818 308 Gene3D G3DSA:3.40.190.290 115 308 3.0E-37 T 12-10-2018 PA257_1597 acae582e0df1fa97691a3e050747853e 222 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 13 222 39.398 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PA257_1597 acae582e0df1fa97691a3e050747853e 222 Gene3D G3DSA:3.40.50.150 6 220 5.5E-77 T 12-10-2018 PA257_1597 acae582e0df1fa97691a3e050747853e 222 SUPERFAMILY SSF53335 14 218 3.31E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1597 acae582e0df1fa97691a3e050747853e 222 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 143 158 - T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PA257_1597 acae582e0df1fa97691a3e050747853e 222 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 13 218 1.3E-69 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PA257_1597 acae582e0df1fa97691a3e050747853e 222 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 18 217 3.0E-65 T 12-10-2018 PA257_5750 3d4b6f937e6b2d962f925828b83181a5 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 92.22 T 12-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria PA257_5750 3d4b6f937e6b2d962f925828b83181a5 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 160 4.5E-74 T 12-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria PA257_5750 3d4b6f937e6b2d962f925828b83181a5 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 6.6E-35 T 12-10-2018 IPR005134 Uncharacterised protein family UPF0114 PA257_1080 f90cf6ef6f4bdfe35274062a5bfa8d71 292 Gene3D G3DSA:3.40.50.720 4 275 1.6E-46 T 12-10-2018 PA257_1080 f90cf6ef6f4bdfe35274062a5bfa8d71 292 SUPERFAMILY SSF51735 1 289 2.59E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1080 f90cf6ef6f4bdfe35274062a5bfa8d71 292 Pfam PF04321 RmlD substrate binding domain 1 288 2.1E-79 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 PA257_1080 f90cf6ef6f4bdfe35274062a5bfa8d71 292 Gene3D G3DSA:3.90.25.10 158 281 1.6E-46 T 12-10-2018 PA257_2593 8cb50a418d30089b7173bc74d233babe 83 Pfam PF01909 Nucleotidyltransferase domain 14 78 1.2E-6 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PA257_2593 8cb50a418d30089b7173bc74d233babe 83 SUPERFAMILY SSF81301 4 83 1.14E-16 T 12-10-2018 PA257_2593 8cb50a418d30089b7173bc74d233babe 83 Gene3D G3DSA:3.30.460.10 1 83 3.9E-18 T 12-10-2018 PA257_6427 667ca571a3e848c1df76a974812e12d0 428 SUPERFAMILY SSF51261 249 424 8.24E-47 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_6427 667ca571a3e848c1df76a974812e12d0 428 Pfam PF01551 Peptidase family M23 327 420 4.1E-25 T 12-10-2018 IPR016047 Peptidase M23 PA257_6427 667ca571a3e848c1df76a974812e12d0 428 Gene3D G3DSA:2.70.70.10 290 425 8.8E-35 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_6233 0ae02b8079368bc568313bec03d8e287 361 SUPERFAMILY SSF46548 147 265 1.05E-18 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_6233 0ae02b8079368bc568313bec03d8e287 361 Pfam PF13484 4Fe-4S double cluster binding domain 201 265 1.6E-19 T 12-10-2018 PA257_6233 0ae02b8079368bc568313bec03d8e287 361 Pfam PF08331 Domain of unknown function (DUF1730) 70 148 5.4E-25 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 PA257_6233 0ae02b8079368bc568313bec03d8e287 361 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 15 324 50.2 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 PA257_6233 0ae02b8079368bc568313bec03d8e287 361 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 202 213 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_6233 0ae02b8079368bc568313bec03d8e287 361 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 22 358 2.4E-152 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 PA257_2598 b1e0e97825e9e00bbf469d60a28d4dcc 185 Gene3D G3DSA:3.40.50.1390 1 125 2.4E-52 T 12-10-2018 PA257_2598 b1e0e97825e9e00bbf469d60a28d4dcc 185 SMART SM00857 2 136 1.5E-61 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_2598 b1e0e97825e9e00bbf469d60a28d4dcc 185 Pfam PF02796 Helix-turn-helix domain of resolvase 138 181 5.9E-6 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 PA257_2598 b1e0e97825e9e00bbf469d60a28d4dcc 185 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PA257_2598 b1e0e97825e9e00bbf469d60a28d4dcc 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PA257_2598 b1e0e97825e9e00bbf469d60a28d4dcc 185 SUPERFAMILY SSF46689 138 182 1.85E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2598 b1e0e97825e9e00bbf469d60a28d4dcc 185 SUPERFAMILY SSF53041 1 135 5.23E-46 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PA257_2598 b1e0e97825e9e00bbf469d60a28d4dcc 185 Gene3D G3DSA:1.10.10.60 138 185 1.9E-9 T 12-10-2018 PA257_2598 b1e0e97825e9e00bbf469d60a28d4dcc 185 Pfam PF00239 Resolvase, N terminal domain 3 135 4.8E-47 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_6677 b71e4512eac2b4fe43cc9c78ce69ed9c 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 80 4.5E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6677 b71e4512eac2b4fe43cc9c78ce69ed9c 319 Gene3D G3DSA:1.10.10.10 21 110 5.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6677 b71e4512eac2b4fe43cc9c78ce69ed9c 319 SUPERFAMILY SSF46785 16 100 2.07E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6677 b71e4512eac2b4fe43cc9c78ce69ed9c 319 Gene3D G3DSA:3.40.190.10 115 303 3.0E-41 T 12-10-2018 PA257_6677 b71e4512eac2b4fe43cc9c78ce69ed9c 319 Gene3D G3DSA:3.40.190.10 179 276 3.0E-41 T 12-10-2018 PA257_6677 b71e4512eac2b4fe43cc9c78ce69ed9c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 58 3.1E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6677 b71e4512eac2b4fe43cc9c78ce69ed9c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 3.1E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6677 b71e4512eac2b4fe43cc9c78ce69ed9c 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 58 69 3.1E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6677 b71e4512eac2b4fe43cc9c78ce69ed9c 319 SUPERFAMILY SSF53850 107 310 1.99E-29 T 12-10-2018 PA257_6677 b71e4512eac2b4fe43cc9c78ce69ed9c 319 Pfam PF03466 LysR substrate binding domain 106 307 8.8E-34 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 SUPERFAMILY SSF50249 224 658 2.86E-146 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 SUPERFAMILY SSF50249 142 239 6.43E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 SMART SM00955 264 598 3.9E-187 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 Pfam PF08206 Ribonuclease B OB domain 91 148 5.9E-22 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 SMART SM00316 659 742 3.9E-11 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 79 741 2.1E-228 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 Hamap MF_01895 Ribonuclease R [rnr]. 42 742 57.11 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 SUPERFAMILY SSF50249 661 741 2.46E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 Pfam PF08461 Ribonuclease R winged-helix domain 27 81 4.6E-8 T 12-10-2018 IPR013668 Ribonuclease R winged-helix domain PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 Gene3D G3DSA:2.40.50.140 662 771 4.2E-19 T 12-10-2018 PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 742 2.4E-261 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 Gene3D G3DSA:2.40.50.140 81 152 1.1E-17 T 12-10-2018 PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 SUPERFAMILY SSF50249 71 151 1.5E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 Pfam PF00575 S1 RNA binding domain 659 740 6.9E-11 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 SMART SM00357 90 149 5.1E-12 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 ProSitePatterns PS01175 Ribonuclease II family signature. 565 589 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site PA257_6218 80fda1776639f507bfa9c51e5fdd3511 905 Pfam PF00773 RNB domain 264 597 8.8E-110 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 PA257_0093 086784b62a6f835a8edc7f7df0253bb8 239 Gene3D G3DSA:3.40.50.300 11 225 9.6E-47 T 12-10-2018 PA257_0093 086784b62a6f835a8edc7f7df0253bb8 239 Pfam PF00005 ABC transporter 26 176 9.8E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0093 086784b62a6f835a8edc7f7df0253bb8 239 SUPERFAMILY SSF52540 26 212 1.43E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0093 086784b62a6f835a8edc7f7df0253bb8 239 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0093 086784b62a6f835a8edc7f7df0253bb8 239 SMART SM00382 30 225 4.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0470 ad56c58e06650dd5a7ac0ee293f01d99 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 267 27.782 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PA257_0470 ad56c58e06650dd5a7ac0ee293f01d99 273 Gene3D G3DSA:3.40.50.720 2 164 1.3E-52 T 12-10-2018 PA257_0470 ad56c58e06650dd5a7ac0ee293f01d99 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PA257_0470 ad56c58e06650dd5a7ac0ee293f01d99 273 SUPERFAMILY SSF51735 5 160 8.86E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0470 ad56c58e06650dd5a7ac0ee293f01d99 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 2.2E-23 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PA257_0470 ad56c58e06650dd5a7ac0ee293f01d99 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 267 2.0E-80 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PA257_0470 ad56c58e06650dd5a7ac0ee293f01d99 273 SUPERFAMILY SSF48179 162 270 1.87E-35 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_0470 ad56c58e06650dd5a7ac0ee293f01d99 273 PIRSF PIRSF000193 3 270 2.3E-83 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PA257_0470 ad56c58e06650dd5a7ac0ee293f01d99 273 Gene3D G3DSA:1.10.3730.10 165 271 1.7E-42 T 12-10-2018 PA257_0470 ad56c58e06650dd5a7ac0ee293f01d99 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 6.6E-38 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PA257_6246 23eeb7aa138d043bc9ec1c224648db2e 236 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 30 186 1.7E-37 T 12-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component PA257_6246 23eeb7aa138d043bc9ec1c224648db2e 236 Gene3D G3DSA:3.40.50.10610 21 190 6.1E-8 T 12-10-2018 PA257_6246 23eeb7aa138d043bc9ec1c224648db2e 236 SUPERFAMILY SSF159594 28 189 2.17E-21 T 12-10-2018 PA257_0626 52dbdaaac9a6f195dbb898f58bc9a1d4 324 Hamap MF_01497 Stress response kinase A [srkA]. 1 317 48.358 T 12-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 PA257_0626 52dbdaaac9a6f195dbb898f58bc9a1d4 324 Gene3D G3DSA:1.10.510.10 57 257 6.7E-121 T 12-10-2018 PA257_0626 52dbdaaac9a6f195dbb898f58bc9a1d4 324 SUPERFAMILY SSF56112 1 322 1.25E-86 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_0626 52dbdaaac9a6f195dbb898f58bc9a1d4 324 Pfam PF01636 Phosphotransferase enzyme family 32 260 2.9E-38 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase PA257_0626 52dbdaaac9a6f195dbb898f58bc9a1d4 324 Gene3D G3DSA:3.30.200.70 10 105 6.7E-121 T 12-10-2018 PA257_0626 52dbdaaac9a6f195dbb898f58bc9a1d4 324 Gene3D G3DSA:1.20.1270.170 146 306 6.7E-121 T 12-10-2018 PA257_3048 6c40741fde839c074d3fcc96b1b3871a 224 SMART SM00448 1 111 8.1E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3048 6c40741fde839c074d3fcc96b1b3871a 224 Gene3D G3DSA:1.10.10.10 123 224 1.3E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3048 6c40741fde839c074d3fcc96b1b3871a 224 Gene3D G3DSA:3.40.50.2300 1 121 7.5E-35 T 12-10-2018 PA257_3048 6c40741fde839c074d3fcc96b1b3871a 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 2.9E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_3048 6c40741fde839c074d3fcc96b1b3871a 224 SUPERFAMILY SSF46894 124 221 2.04E-28 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_3048 6c40741fde839c074d3fcc96b1b3871a 224 SMART SM00862 145 220 6.0E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_3048 6c40741fde839c074d3fcc96b1b3871a 224 Pfam PF00072 Response regulator receiver domain 3 112 2.1E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3048 6c40741fde839c074d3fcc96b1b3871a 224 SUPERFAMILY SSF52172 1 121 6.12E-38 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3048 6c40741fde839c074d3fcc96b1b3871a 224 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 1.2E-101 T 12-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PA257_6545 d6272dddb528d41b8d6a9a4bb155e3e1 297 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 287 32.132 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PA257_6545 d6272dddb528d41b8d6a9a4bb155e3e1 297 Gene3D G3DSA:3.90.1280.10 228 287 1.3E-21 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PA257_6545 d6272dddb528d41b8d6a9a4bb155e3e1 297 Pfam PF01430 Hsp33 protein 5 276 6.8E-83 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PA257_6545 d6272dddb528d41b8d6a9a4bb155e3e1 297 SUPERFAMILY SSF118352 226 285 2.09E-18 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PA257_6545 d6272dddb528d41b8d6a9a4bb155e3e1 297 Gene3D G3DSA:1.10.287.480 180 227 3.8E-21 T 12-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily PA257_6545 d6272dddb528d41b8d6a9a4bb155e3e1 297 Gene3D G3DSA:3.55.30.10 1 173 4.8E-59 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PA257_6545 d6272dddb528d41b8d6a9a4bb155e3e1 297 PIRSF PIRSF005261 1 287 3.7E-77 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PA257_6545 d6272dddb528d41b8d6a9a4bb155e3e1 297 SUPERFAMILY SSF64397 4 234 7.72E-70 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PA257_0317 d3fbbdcc08b85ff26ac6f21d0d2fb378 329 SUPERFAMILY SSF141868 13 258 5.1E-85 T 12-10-2018 IPR035919 EAL domain superfamily PA257_0317 d3fbbdcc08b85ff26ac6f21d0d2fb378 329 Pfam PF00563 EAL domain 12 245 1.2E-71 T 12-10-2018 IPR001633 EAL domain PA257_0317 d3fbbdcc08b85ff26ac6f21d0d2fb378 329 SMART SM00052 6 250 4.5E-124 T 12-10-2018 IPR001633 EAL domain PA257_0317 d3fbbdcc08b85ff26ac6f21d0d2fb378 329 Pfam PF11809 Domain of unknown function (DUF3330) 261 328 2.6E-41 T 12-10-2018 IPR021767 Transposon Tn21 modulator protein PA257_0317 d3fbbdcc08b85ff26ac6f21d0d2fb378 329 Gene3D G3DSA:3.20.20.450 10 257 8.7E-95 T 12-10-2018 IPR035919 EAL domain superfamily PA257_1802 12c59ea33e94c9421d05bd9af4b50d9d 455 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_1802 12c59ea33e94c9421d05bd9af4b50d9d 455 SUPERFAMILY SSF103473 10 452 8.89E-93 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1802 12c59ea33e94c9421d05bd9af4b50d9d 455 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_1802 12c59ea33e94c9421d05bd9af4b50d9d 455 Gene3D G3DSA:1.20.1250.20 17 454 6.9E-97 T 12-10-2018 PA257_1802 12c59ea33e94c9421d05bd9af4b50d9d 455 Pfam PF00083 Sugar (and other) transporter 56 453 8.1E-49 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PA257_3042 6b22b0bed056ca9b3c4d9bab3cc1b930 426 Pfam PF13533 Biotin-lipoyl like 89 136 4.4E-15 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PA257_3042 6b22b0bed056ca9b3c4d9bab3cc1b930 426 SUPERFAMILY SSF111369 78 315 1.19E-60 T 12-10-2018 PA257_3042 6b22b0bed056ca9b3c4d9bab3cc1b930 426 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 392 1.9E-81 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_3042 6b22b0bed056ca9b3c4d9bab3cc1b930 426 Gene3D G3DSA:2.40.50.100 88 232 5.6E-97 T 12-10-2018 PA257_3042 6b22b0bed056ca9b3c4d9bab3cc1b930 426 Gene3D G3DSA:2.40.420.20 322 390 5.6E-97 T 12-10-2018 PA257_3042 6b22b0bed056ca9b3c4d9bab3cc1b930 426 Gene3D G3DSA:1.10.287.470 123 196 5.6E-97 T 12-10-2018 PA257_3042 6b22b0bed056ca9b3c4d9bab3cc1b930 426 Gene3D G3DSA:2.40.30.170 77 321 5.6E-97 T 12-10-2018 PA257_3042 6b22b0bed056ca9b3c4d9bab3cc1b930 426 Pfam PF13437 HlyD family secretion protein 200 301 6.5E-9 T 12-10-2018 PA257_5905 ebd7ae86d63b19a944fad84811c3a8e3 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 1.6E-63 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PA257_5905 ebd7ae86d63b19a944fad84811c3a8e3 163 Gene3D G3DSA:3.30.70.1150 83 163 7.5E-29 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal PA257_5905 ebd7ae86d63b19a944fad84811c3a8e3 163 SUPERFAMILY SSF55021 79 162 2.29E-26 T 12-10-2018 PA257_5905 ebd7ae86d63b19a944fad84811c3a8e3 163 Gene3D G3DSA:3.30.70.260 1 79 2.4E-33 T 12-10-2018 PA257_5905 ebd7ae86d63b19a944fad84811c3a8e3 163 SUPERFAMILY SSF55021 1 75 2.45E-21 T 12-10-2018 PA257_5905 ebd7ae86d63b19a944fad84811c3a8e3 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-37 T 12-10-2018 PA257_5905 ebd7ae86d63b19a944fad84811c3a8e3 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 1.7E-26 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PA257_5905 ebd7ae86d63b19a944fad84811c3a8e3 163 Pfam PF13710 ACT domain 12 72 3.4E-15 T 12-10-2018 PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 Gene3D G3DSA:2.60.120.10 14 98 2.3E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 SUPERFAMILY SSF51215 22 153 1.44E-21 T 12-10-2018 IPR037923 Transcription regulator HTH-like PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 6.2E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 6.2E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 SUPERFAMILY SSF46689 225 274 4.3E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 Pfam PF02311 AraC-like ligand binding domain 12 150 3.0E-26 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 SMART SM00342 189 272 4.6E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 Pfam PF12833 Helix-turn-helix domain 195 274 2.3E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 Gene3D G3DSA:1.10.10.60 174 274 8.4E-28 T 12-10-2018 PA257_4163 c8d7700a8be1f2ca1fcb83c03d473618 274 SUPERFAMILY SSF46689 176 223 6.99E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6741 3308056f74060b6c023c127d9dbffc85 408 Gene3D G3DSA:1.10.1060.10 2 106 8.3E-11 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_6741 3308056f74060b6c023c127d9dbffc85 408 Pfam PF12838 4Fe-4S dicluster domain 24 89 6.4E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_6741 3308056f74060b6c023c127d9dbffc85 408 Pfam PF02754 Cysteine-rich domain 303 386 3.1E-12 T 12-10-2018 IPR004017 Cysteine-rich domain PA257_6741 3308056f74060b6c023c127d9dbffc85 408 Pfam PF02754 Cysteine-rich domain 171 255 3.8E-12 T 12-10-2018 IPR004017 Cysteine-rich domain PA257_6741 3308056f74060b6c023c127d9dbffc85 408 PIRSF PIRSF000139 5 408 3.7E-118 T 12-10-2018 PA257_6741 3308056f74060b6c023c127d9dbffc85 408 SUPERFAMILY SSF54862 18 124 1.38E-18 T 12-10-2018 PA257_6741 3308056f74060b6c023c127d9dbffc85 408 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_5976 d765915b7e464bca75efcc3384210aed 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 266 36.045 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_5976 d765915b7e464bca75efcc3384210aed 268 SUPERFAMILY SSF51735 1 267 4.3E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5976 d765915b7e464bca75efcc3384210aed 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 126 9.1E-40 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_5976 d765915b7e464bca75efcc3384210aed 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_5976 d765915b7e464bca75efcc3384210aed 268 SUPERFAMILY SSF55347 128 237 1.79E-37 T 12-10-2018 PA257_5976 d765915b7e464bca75efcc3384210aed 268 Gene3D G3DSA:3.40.50.720 4 265 9.2E-109 T 12-10-2018 PA257_5976 d765915b7e464bca75efcc3384210aed 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 6.9E-44 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_5976 d765915b7e464bca75efcc3384210aed 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 266 1.9E-100 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_5976 d765915b7e464bca75efcc3384210aed 268 PIRSF PIRSF000161 1 268 4.6E-88 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_5976 d765915b7e464bca75efcc3384210aed 268 Gene3D G3DSA:3.30.360.10 128 235 9.2E-109 T 12-10-2018 PA257_6009 5baabad181b33230bd10966e4b24bb1c 229 Pfam PF10979 Protein of unknown function (DUF2786) 5 45 3.8E-15 T 12-10-2018 IPR024498 Domain of unknown function DUF2786 PA257_6009 5baabad181b33230bd10966e4b24bb1c 229 PIRSF PIRSF028111 1 229 2.0E-87 T 12-10-2018 IPR016868 Bacteriophage B3, Orf5 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 1.2E-51 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.5E-18 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 SUPERFAMILY SSF47203 230 382 2.9E-55 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 PIRSF PIRSF016578 129 195 0.035 T 12-10-2018 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 PIRSF PIRSF016578 3 88 1.9 T 12-10-2018 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 PIRSF PIRSF016578 235 383 6.2E-13 T 12-10-2018 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 Gene3D G3DSA:1.10.540.10 1 118 5.4E-23 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 220 2.4E-25 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 Gene3D G3DSA:2.40.110.10 120 238 1.3E-39 T 12-10-2018 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 Gene3D G3DSA:1.20.140.10 239 383 4.0E-54 T 12-10-2018 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_6264 e293d9e64f6f5d29c58eb330e921e681 386 SUPERFAMILY SSF56645 1 243 6.54E-69 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 Gene3D G3DSA:2.40.50.140 1 106 1.4E-37 T 12-10-2018 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 558 1.7E-108 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 SUPERFAMILY SSF55261 291 421 1.26E-44 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 582 5.5E-243 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 SUPERFAMILY SSF50249 1 105 7.43E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 Pfam PF01336 OB-fold nucleic acid binding domain 18 101 1.8E-16 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 SUPERFAMILY SSF55681 108 584 1.43E-102 T 12-10-2018 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 4.7E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 4.7E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 4.7E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 4.7E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 Gene3D G3DSA:3.30.1360.30 273 422 5.1E-202 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 Pfam PF02938 GAD domain 309 408 1.3E-31 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 Gene3D G3DSA:3.30.930.10 118 582 5.1E-202 T 12-10-2018 PA257_4874 e48cd0ef111e78e9d12f180addbba638 590 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.862 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 Gene3D G3DSA:2.120.10.90 504 736 4.4E-11 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 9.1E-132 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 SMART SM00434 15 465 4.0E-228 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 Gene3D G3DSA:1.10.268.10 373 458 7.5E-178 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 745 0.0 T 12-10-2018 PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 Gene3D G3DSA:3.90.199.10 36 487 7.5E-178 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 SUPERFAMILY SSF56719 35 487 2.09E-155 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 SUPERFAMILY SSF101904 501 750 5.36E-53 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 643 0.0061 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 689 2.9E-5 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 Gene3D G3DSA:3.30.1360.40 242 335 7.5E-178 T 12-10-2018 PA257_6247 38deec7fa754108f57c4bd4ba4bf3acd 754 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 34.06 T 12-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_0447 dfc74da12c00980b2d6ba116e1fcd566 495 Gene3D G3DSA:3.30.830.10 280 477 5.5E-56 T 12-10-2018 PA257_0447 dfc74da12c00980b2d6ba116e1fcd566 495 SUPERFAMILY SSF63411 61 267 1.28E-41 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PA257_0447 dfc74da12c00980b2d6ba116e1fcd566 495 SUPERFAMILY SSF63411 290 473 6.0E-44 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PA257_0447 dfc74da12c00980b2d6ba116e1fcd566 495 Gene3D G3DSA:3.30.830.10 66 277 1.3E-47 T 12-10-2018 PA257_0447 dfc74da12c00980b2d6ba116e1fcd566 495 Pfam PF05193 Peptidase M16 inactive domain 230 405 1.9E-30 T 12-10-2018 IPR007863 Peptidase M16, C-terminal PA257_0447 dfc74da12c00980b2d6ba116e1fcd566 495 Pfam PF00675 Insulinase (Peptidase family M16) 80 203 3.9E-5 T 12-10-2018 IPR011765 Peptidase M16, N-terminal PA257_6163 408c0e40996529229636809bf764c364 229 SMART SM00448 1 111 1.3E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6163 408c0e40996529229636809bf764c364 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 218 9.7E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_6163 408c0e40996529229636809bf764c364 229 Gene3D G3DSA:3.40.50.2300 1 119 9.3E-39 T 12-10-2018 PA257_6163 408c0e40996529229636809bf764c364 229 Pfam PF00072 Response regulator receiver domain 3 111 5.2E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6163 408c0e40996529229636809bf764c364 229 SUPERFAMILY SSF52172 1 178 1.16E-39 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6163 408c0e40996529229636809bf764c364 229 Gene3D G3DSA:1.10.10.10 121 224 9.2E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6163 408c0e40996529229636809bf764c364 229 SMART SM00862 144 219 4.9E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_6163 408c0e40996529229636809bf764c364 229 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 1.0E-104 T 12-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PA257_1146 9ef4fad68cd017e01874a3213bef7bec 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 420 42.77 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PA257_1146 9ef4fad68cd017e01874a3213bef7bec 421 Gene3D G3DSA:3.40.605.10 16 417 1.1E-169 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_1146 9ef4fad68cd017e01874a3213bef7bec 421 SUPERFAMILY SSF53720 8 420 6.02E-122 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_1146 9ef4fad68cd017e01874a3213bef7bec 421 Pfam PF00171 Aldehyde dehydrogenase family 14 283 3.7E-14 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_1146 9ef4fad68cd017e01874a3213bef7bec 421 Pfam PF00171 Aldehyde dehydrogenase family 311 377 1.0E-5 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_1146 9ef4fad68cd017e01874a3213bef7bec 421 PIRSF PIRSF000151 1 421 4.8E-182 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 PA257_1146 9ef4fad68cd017e01874a3213bef7bec 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 410 1.1E-158 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PA257_1146 9ef4fad68cd017e01874a3213bef7bec 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 349 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PA257_1146 9ef4fad68cd017e01874a3213bef7bec 421 Gene3D G3DSA:3.40.309.10 229 378 1.1E-169 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_2745 ae628ddc87783098203be5ebbc9ccab9 72 Gene3D G3DSA:1.10.260.40 5 65 1.1E-7 T 12-10-2018 PA257_2745 ae628ddc87783098203be5ebbc9ccab9 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 6.3E-21 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_2745 ae628ddc87783098203be5ebbc9ccab9 72 SUPERFAMILY SSF47413 2 69 5.36E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_2745 ae628ddc87783098203be5ebbc9ccab9 72 SMART SM00530 9 62 0.0057 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_2320 22275e9dc404d0906bc5b1ac6e5c2600 741 Pfam PF03772 Competence protein 201 463 5.0E-53 T 12-10-2018 IPR004477 ComEC/Rec2-related protein PA257_2320 22275e9dc404d0906bc5b1ac6e5c2600 741 Gene3D G3DSA:3.60.15.10 493 726 7.6E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_2320 22275e9dc404d0906bc5b1ac6e5c2600 741 SMART SM00849 504 687 3.3E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_2320 22275e9dc404d0906bc5b1ac6e5c2600 741 SUPERFAMILY SSF56281 496 721 6.86E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_2320 22275e9dc404d0906bc5b1ac6e5c2600 741 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 222 400 1.0E-20 T 12-10-2018 IPR004477 ComEC/Rec2-related protein PA257_2320 22275e9dc404d0906bc5b1ac6e5c2600 741 Pfam PF00753 Metallo-beta-lactamase superfamily 501 668 8.3E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_2320 22275e9dc404d0906bc5b1ac6e5c2600 741 Pfam PF13567 Domain of unknown function (DUF4131) 21 168 1.3E-21 T 12-10-2018 IPR025405 Domain of unknown function DUF4131 PA257_2320 22275e9dc404d0906bc5b1ac6e5c2600 741 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 122 716 2.7E-86 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 PA257_3017 d853f3452c1fbca8f6a7548a145eaddd 310 Pfam PF03466 LysR substrate binding domain 93 296 7.4E-32 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3017 d853f3452c1fbca8f6a7548a145eaddd 310 Gene3D G3DSA:3.40.190.10 171 267 6.6E-61 T 12-10-2018 PA257_3017 d853f3452c1fbca8f6a7548a145eaddd 310 Gene3D G3DSA:1.10.10.10 1 89 4.5E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3017 d853f3452c1fbca8f6a7548a145eaddd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3017 d853f3452c1fbca8f6a7548a145eaddd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3017 d853f3452c1fbca8f6a7548a145eaddd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3017 d853f3452c1fbca8f6a7548a145eaddd 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 6.9E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3017 d853f3452c1fbca8f6a7548a145eaddd 310 SUPERFAMILY SSF53850 90 295 7.6E-50 T 12-10-2018 PA257_3017 d853f3452c1fbca8f6a7548a145eaddd 310 Gene3D G3DSA:3.40.190.10 92 291 6.6E-61 T 12-10-2018 PA257_3017 d853f3452c1fbca8f6a7548a145eaddd 310 SUPERFAMILY SSF46785 2 82 4.03E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0678 800de3683b86908bf9fb57c3fd03a099 184 Gene3D G3DSA:2.60.120.10 95 184 6.6E-15 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_0678 800de3683b86908bf9fb57c3fd03a099 184 SMART SM00530 14 69 4.4E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_0678 800de3683b86908bf9fb57c3fd03a099 184 SUPERFAMILY SSF47413 8 74 5.07E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_0678 800de3683b86908bf9fb57c3fd03a099 184 Pfam PF01381 Helix-turn-helix 15 69 1.3E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_0678 800de3683b86908bf9fb57c3fd03a099 184 Gene3D G3DSA:1.10.260.40 2 77 1.3E-14 T 12-10-2018 PA257_0678 800de3683b86908bf9fb57c3fd03a099 184 Pfam PF07883 Cupin domain 115 183 5.6E-15 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_0678 800de3683b86908bf9fb57c3fd03a099 184 SUPERFAMILY SSF51182 55 182 1.89E-25 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_0820 73014e469e112edaed7f6671654e6a13 159 SMART SM00739 105 132 1.4E-7 T 12-10-2018 IPR005824 KOW PA257_0820 73014e469e112edaed7f6671654e6a13 159 Pfam PF00467 KOW motif 108 138 4.2E-9 T 12-10-2018 IPR005824 KOW PA257_0820 73014e469e112edaed7f6671654e6a13 159 PRINTS PR00338 Transcription termination factor NUSG signature 39 51 6.7E-20 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PA257_0820 73014e469e112edaed7f6671654e6a13 159 PRINTS PR00338 Transcription termination factor NUSG signature 117 132 6.7E-20 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PA257_0820 73014e469e112edaed7f6671654e6a13 159 PRINTS PR00338 Transcription termination factor NUSG signature 135 151 6.7E-20 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PA257_0820 73014e469e112edaed7f6671654e6a13 159 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 159 18.155 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PA257_0820 73014e469e112edaed7f6671654e6a13 159 Gene3D G3DSA:3.30.70.940 1 99 1.2E-35 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PA257_0820 73014e469e112edaed7f6671654e6a13 159 ProSitePatterns PS01014 Transcription termination factor nusG signature. 142 151 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site PA257_0820 73014e469e112edaed7f6671654e6a13 159 Pfam PF02357 Transcription termination factor nusG 9 90 3.4E-20 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PA257_0820 73014e469e112edaed7f6671654e6a13 159 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 3 159 1.7E-58 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PA257_0820 73014e469e112edaed7f6671654e6a13 159 SMART SM00738 2 93 8.5E-28 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PA257_0820 73014e469e112edaed7f6671654e6a13 159 Gene3D G3DSA:2.30.30.30 100 159 4.2E-26 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 PA257_0820 73014e469e112edaed7f6671654e6a13 159 SUPERFAMILY SSF50104 103 159 9.03E-20 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily PA257_0820 73014e469e112edaed7f6671654e6a13 159 SUPERFAMILY SSF82679 3 95 7.19E-29 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PA257_0620 2a2b408fd3403892b92cffb33f2f1213 265 Pfam PF00561 alpha/beta hydrolase fold 35 143 6.9E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0620 2a2b408fd3403892b92cffb33f2f1213 265 Gene3D G3DSA:3.40.50.1820 1 263 1.5E-82 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0620 2a2b408fd3403892b92cffb33f2f1213 265 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 15 262 1.3E-80 T 12-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 PA257_0620 2a2b408fd3403892b92cffb33f2f1213 265 SUPERFAMILY SSF53474 8 262 2.53E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0620 2a2b408fd3403892b92cffb33f2f1213 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 3.0E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0620 2a2b408fd3403892b92cffb33f2f1213 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 3.0E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0620 2a2b408fd3403892b92cffb33f2f1213 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 3.0E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0620 2a2b408fd3403892b92cffb33f2f1213 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 3.0E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_3630 17ae093982160f9ec91b3606ede1422f 590 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 7.4E-47 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PA257_3630 17ae093982160f9ec91b3606ede1422f 590 SUPERFAMILY SSF52467 189 356 1.37E-38 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_3630 17ae093982160f9ec91b3606ede1422f 590 SUPERFAMILY SSF52518 4 175 7.31E-50 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_3630 17ae093982160f9ec91b3606ede1422f 590 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PA257_3630 17ae093982160f9ec91b3606ede1422f 590 SUPERFAMILY SSF52518 364 563 1.61E-52 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_3630 17ae093982160f9ec91b3606ede1422f 590 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 543 5.5E-27 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PA257_3630 17ae093982160f9ec91b3606ede1422f 590 Gene3D G3DSA:3.40.50.970 345 566 7.7E-55 T 12-10-2018 PA257_3630 17ae093982160f9ec91b3606ede1422f 590 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 328 7.1E-26 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PA257_3630 17ae093982160f9ec91b3606ede1422f 590 Gene3D G3DSA:3.40.50.970 1 178 7.7E-58 T 12-10-2018 PA257_3630 17ae093982160f9ec91b3606ede1422f 590 Gene3D G3DSA:3.40.50.1220 187 341 1.6E-40 T 12-10-2018 PA257_3003 a0120b203e29a2bb124d6fb03da992bf 495 SUPERFAMILY SSF52091 400 485 2.55E-10 T 12-10-2018 IPR036513 STAS domain superfamily PA257_3003 a0120b203e29a2bb124d6fb03da992bf 495 Gene3D G3DSA:3.30.750.24 388 484 9.6E-27 T 12-10-2018 IPR036513 STAS domain superfamily PA257_3003 a0120b203e29a2bb124d6fb03da992bf 495 Pfam PF00916 Sulfate permease family 168 346 2.2E-28 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PA257_3003 a0120b203e29a2bb124d6fb03da992bf 495 Pfam PF00916 Sulfate permease family 14 141 4.2E-27 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PA257_3003 a0120b203e29a2bb124d6fb03da992bf 495 Pfam PF01740 STAS domain 405 485 1.8E-6 T 12-10-2018 IPR002645 STAS domain PA257_3003 a0120b203e29a2bb124d6fb03da992bf 495 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 12-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 PA257_6732 50a3ad202b6ad97ec6da1badcf459997 469 Pfam PF04073 Aminoacyl-tRNA editing domain 30 142 4.2E-16 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PA257_6732 50a3ad202b6ad97ec6da1badcf459997 469 PIRSF PIRSF036888 1 466 5.6E-281 T 12-10-2018 IPR014627 Uncharacterised conserved protein UCP036888, signal transduction HD-GYP-like, PA5346 type PA257_6732 50a3ad202b6ad97ec6da1badcf459997 469 SUPERFAMILY SSF109604 180 452 4.08E-61 T 12-10-2018 PA257_6732 50a3ad202b6ad97ec6da1badcf459997 469 Gene3D G3DSA:3.90.960.10 13 153 1.2E-26 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_6732 50a3ad202b6ad97ec6da1badcf459997 469 Gene3D G3DSA:1.10.3210.10 156 465 3.8E-97 T 12-10-2018 PA257_6732 50a3ad202b6ad97ec6da1badcf459997 469 SUPERFAMILY SSF55826 19 145 8.63E-13 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_6732 50a3ad202b6ad97ec6da1badcf459997 469 Pfam PF08668 HDOD domain 195 395 2.4E-45 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:1.10.1200.10 2082 2160 3.1E-25 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:1.10.1200.10 1017 1099 3.0E-28 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF52777 1294 1539 3.67E-63 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF47336 1022 1095 3.66E-20 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.40.50.12780 1567 1974 6.8E-146 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.40.50.12780 508 904 2.0E-137 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4675 4690 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.559.10 2642 3004 5.8E-127 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF56801 3051 3606 4.32E-166 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3234 3245 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.559.30 3870 4119 3.4E-122 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2117 2132 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF53474 4718 4981 2.65E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF52777 2168 2367 7.67E-43 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2472 2629 1.2E-45 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.559.30 232 483 6.7E-156 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.559.10 3700 4059 3.4E-122 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3239 7042669897435217b0b5064517947bf7 4991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3618 3633 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3239 7042669897435217b0b5064517947bf7 4991 SMART SM00823 Phosphopantetheine attachment site 3594 3662 7.8E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3239 7042669897435217b0b5064517947bf7 4991 SMART SM00823 Phosphopantetheine attachment site 4651 4722 0.81 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3239 7042669897435217b0b5064517947bf7 4991 SMART SM00823 Phosphopantetheine attachment site 1029 1098 5.6E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3239 7042669897435217b0b5064517947bf7 4991 SMART SM00823 Phosphopantetheine attachment site 2093 2161 2.2E-5 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00501 AMP-binding enzyme 518 912 2.2E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00501 AMP-binding enzyme 4144 4542 1.2E-83 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00501 AMP-binding enzyme 3093 3489 1.0E-101 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00501 AMP-binding enzyme 1577 1982 1.9E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.40.50.1820 4642 4894 9.9E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF56801 1533 2106 1.26E-165 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF47336 3586 3656 7.46E-18 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF56801 4125 4664 1.57E-147 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4283 4294 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.40.50.12780 3079 3482 9.7E-152 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.40.50.12780 4132 4536 1.8E-124 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:1.10.1200.10 3579 3664 9.5E-24 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.559.10 51 427 6.7E-156 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.559.10 2161 2337 7.6E-56 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.300.30 905 1016 2.5E-33 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.300.30 3483 3578 1.9E-32 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF52777 1117 1288 1.56E-52 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF52777 2354 2608 6.56E-44 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF47336 2085 2155 3.8E-19 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.559.30 2814 3069 5.8E-127 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF52777 2642 2812 2.33E-42 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00975 Thioesterase domain 4739 4848 1.4E-25 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF13193 AMP-binding enzyme C-terminal domain 3497 3568 1.5E-12 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF13193 AMP-binding enzyme C-terminal domain 920 1003 1.5E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF13193 AMP-binding enzyme C-terminal domain 1990 2067 3.7E-13 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF13193 AMP-binding enzyme C-terminal domain 4550 4626 1.5E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3239 7042669897435217b0b5064517947bf7 4991 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1718 1729 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF47336 4643 4716 4.32E-16 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.300.30 1976 2081 3.9E-35 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.300.30 4537 4641 5.6E-34 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF52777 2814 3080 3.34E-55 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00668 Condensation domain 49 498 1.4E-110 T 12-10-2018 IPR001242 Condensation domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00668 Condensation domain 1117 1553 5.8E-107 T 12-10-2018 IPR001242 Condensation domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00668 Condensation domain 2637 3073 1.4E-87 T 12-10-2018 IPR001242 Condensation domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00668 Condensation domain 2173 2613 7.9E-80 T 12-10-2018 IPR001242 Condensation domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00668 Condensation domain 3696 4121 7.8E-78 T 12-10-2018 IPR001242 Condensation domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.559.10 1117 1485 2.6E-158 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF52777 52 228 1.33E-51 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF56801 476 1042 5.89E-158 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF52777 3870 4112 4.67E-48 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF52777 234 486 2.89E-63 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00550 Phosphopantetheine attachment site 1032 1094 3.0E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00550 Phosphopantetheine attachment site 3595 3657 4.4E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00550 Phosphopantetheine attachment site 2094 2154 2.8E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Pfam PF00550 Phosphopantetheine attachment site 4654 4717 3.8E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3239 7042669897435217b0b5064517947bf7 4991 SUPERFAMILY SSF52777 3700 3868 3.0E-45 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.559.30 1292 1541 2.6E-158 T 12-10-2018 PA257_3239 7042669897435217b0b5064517947bf7 4991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1053 1068 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3239 7042669897435217b0b5064517947bf7 4991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 539 936 1.2E-130 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3239 7042669897435217b0b5064517947bf7 4991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4163 4566 3.5E-118 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3239 7042669897435217b0b5064517947bf7 4991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1598 2006 5.1E-136 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3239 7042669897435217b0b5064517947bf7 4991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3115 3513 8.1E-140 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3239 7042669897435217b0b5064517947bf7 4991 Gene3D G3DSA:3.30.559.30 2338 2608 1.3E-82 T 12-10-2018 PA257_5441 d83aa6debe17f5f2595771c9199900a9 398 SUPERFAMILY SSF54675 6 140 4.71E-42 T 12-10-2018 PA257_5441 d83aa6debe17f5f2595771c9199900a9 398 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 171 397 9.1E-83 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 PA257_5441 d83aa6debe17f5f2595771c9199900a9 398 SUPERFAMILY SSF51690 122 396 3.2E-89 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PA257_5441 d83aa6debe17f5f2595771c9199900a9 398 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 398 48.512 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PA257_5441 d83aa6debe17f5f2595771c9199900a9 398 Gene3D G3DSA:3.20.140.10 1 398 1.6E-177 T 12-10-2018 PA257_5441 d83aa6debe17f5f2595771c9199900a9 398 PIRSF PIRSF000484 1 385 6.9E-62 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 PA257_5441 d83aa6debe17f5f2595771c9199900a9 398 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 397 6.0E-150 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PA257_4219 6515258fde30f888326e395183d91e2b 465 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 1.1E-251 T 12-10-2018 IPR017715 Putative aminophosphonate oxidoreductase PA257_4219 6515258fde30f888326e395183d91e2b 465 SUPERFAMILY SSF51905 29 407 6.69E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4219 6515258fde30f888326e395183d91e2b 465 Gene3D G3DSA:3.30.9.10 124 354 1.5E-63 T 12-10-2018 PA257_4219 6515258fde30f888326e395183d91e2b 465 Gene3D G3DSA:3.50.50.60 30 394 1.5E-63 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4219 6515258fde30f888326e395183d91e2b 465 Pfam PF01266 FAD dependent oxidoreductase 30 393 9.7E-51 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_0795 326cbbb33cb0748732ec0e2fe6556867 322 SUPERFAMILY SSF51412 6 305 2.75E-58 T 12-10-2018 PA257_0795 326cbbb33cb0748732ec0e2fe6556867 322 Pfam PF03060 Nitronate monooxygenase 89 302 6.5E-27 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PA257_0795 326cbbb33cb0748732ec0e2fe6556867 322 Gene3D G3DSA:3.20.20.70 8 319 8.0E-70 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4125 a31ab9f96595388412245f0df50e4ee6 200 SUPERFAMILY SSF47616 77 200 6.0E-30 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_4125 a31ab9f96595388412245f0df50e4ee6 200 Gene3D G3DSA:1.20.1050.10 82 197 9.8E-41 T 12-10-2018 PA257_4125 a31ab9f96595388412245f0df50e4ee6 200 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 75 2.6E-16 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_4125 a31ab9f96595388412245f0df50e4ee6 200 Gene3D G3DSA:3.40.30.10 1 79 6.4E-28 T 12-10-2018 PA257_4125 a31ab9f96595388412245f0df50e4ee6 200 SUPERFAMILY SSF52833 1 76 1.25E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4125 a31ab9f96595388412245f0df50e4ee6 200 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 189 1.6E-11 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_1103 5266d8f37a7825bae3d3a41c4ca429fc 205 SUPERFAMILY SSF142695 3 172 1.15E-65 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PA257_1103 5266d8f37a7825bae3d3a41c4ca429fc 205 Gene3D G3DSA:3.40.50.10990 2 173 4.2E-73 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PA257_1103 5266d8f37a7825bae3d3a41c4ca429fc 205 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 194 8.3E-81 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PA257_1103 5266d8f37a7825bae3d3a41c4ca429fc 205 Pfam PF00925 GTP cyclohydrolase II 8 170 1.1E-67 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PA257_1103 5266d8f37a7825bae3d3a41c4ca429fc 205 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 45.123 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PA257_1898 3810e3243d07f850309959d8186e5a0e 238 Pfam PF00005 ABC transporter 27 181 4.7E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1898 3810e3243d07f850309959d8186e5a0e 238 SMART SM00382 36 233 1.9E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1898 3810e3243d07f850309959d8186e5a0e 238 SUPERFAMILY SSF52540 4 227 4.31E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1898 3810e3243d07f850309959d8186e5a0e 238 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 4 226 2.4E-107 T 12-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_1898 3810e3243d07f850309959d8186e5a0e 238 Gene3D G3DSA:3.40.50.300 1 236 8.6E-48 T 12-10-2018 PA257_1898 3810e3243d07f850309959d8186e5a0e 238 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 Pfam PF12833 Helix-turn-helix domain 110 186 2.8E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 Pfam PF02805 Metal binding domain of Ada 16 78 3.8E-27 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 272 350 1.8E-33 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 SUPERFAMILY SSF46767 271 351 1.09E-29 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 272 351 8.3E-30 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 SUPERFAMILY SSF53155 191 274 2.16E-9 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 Gene3D G3DSA:3.40.10.10 12 80 2.7E-26 T 12-10-2018 IPR035451 Ada-like domain superfamily PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 SMART SM00342 103 184 1.5E-6 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 321 327 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 SUPERFAMILY SSF57884 9 87 5.89E-31 T 12-10-2018 IPR035451 Ada-like domain superfamily PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 Gene3D G3DSA:1.10.10.60 92 188 5.4E-12 T 12-10-2018 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 Gene3D G3DSA:3.30.160.70 189 266 2.9E-6 T 12-10-2018 PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 PIRSF PIRSF000409 1 357 7.8E-148 T 12-10-2018 IPR016221 Bifunctional regulatory protein Ada PA257_1678 c3dea092003c17b1fcab256dcc53f422 357 Gene3D G3DSA:1.10.10.10 270 354 1.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1095 3c4c0239ad845e416fe3beeaedd18205 219 Gene3D G3DSA:2.40.30.20 1 89 3.1E-26 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_1095 3c4c0239ad845e416fe3beeaedd18205 219 SUPERFAMILY SSF63380 93 194 7.4E-32 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_1095 3c4c0239ad845e416fe3beeaedd18205 219 Pfam PF00677 Lumazine binding domain 3 87 3.3E-20 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_1095 3c4c0239ad845e416fe3beeaedd18205 219 Pfam PF00677 Lumazine binding domain 100 184 2.5E-24 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_1095 3c4c0239ad845e416fe3beeaedd18205 219 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 2.6E-65 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_1095 3c4c0239ad845e416fe3beeaedd18205 219 SUPERFAMILY SSF63380 1 88 4.0E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_1095 3c4c0239ad845e416fe3beeaedd18205 219 Gene3D G3DSA:2.40.30.20 102 202 1.0E-35 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_1095 3c4c0239ad845e416fe3beeaedd18205 219 PIRSF PIRSF000498 1 212 1.1E-76 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_0793 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0793 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0793 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0793 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0793 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0793 059ec4becca54abbe45a73345091d0a0 266 SUPERFAMILY SSF51735 3 256 5.8E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0793 059ec4becca54abbe45a73345091d0a0 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 186 6.6E-4 T 12-10-2018 PA257_0793 059ec4becca54abbe45a73345091d0a0 266 Pfam PF00106 short chain dehydrogenase 4 192 3.4E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0793 059ec4becca54abbe45a73345091d0a0 266 PIRSF PIRSF000126 1 260 1.9E-69 T 12-10-2018 PA257_0793 059ec4becca54abbe45a73345091d0a0 266 Gene3D G3DSA:3.40.50.720 3 257 4.5E-62 T 12-10-2018 PA257_0793 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0793 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0793 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4706 4ad2e581a777e8dc2b8c57e35273e920 385 SUPERFAMILY SSF103473 1 382 1.01E-39 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4706 4ad2e581a777e8dc2b8c57e35273e920 385 Pfam PF07690 Major Facilitator Superfamily 21 350 1.8E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4706 4ad2e581a777e8dc2b8c57e35273e920 385 Gene3D G3DSA:1.20.1720.10 9 382 7.5E-64 T 12-10-2018 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 PIRSF PIRSF000429 1 394 4.9E-125 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 SUPERFAMILY SSF53901 1 265 7.84E-71 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 Pfam PF00108 Thiolase, N-terminal domain 4 261 3.1E-67 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 SUPERFAMILY SSF53901 271 391 1.37E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 8.1E-133 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 Gene3D G3DSA:3.40.47.10 4 280 1.4E-142 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 Pfam PF02803 Thiolase, C-terminal domain 271 391 6.7E-45 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 Gene3D G3DSA:3.40.47.10 140 386 1.4E-142 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1817 4eaaf2a407b6f0f9bbafe236bf320af7 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 PA257_2938 6af0c1bf2fedb74bf470fc9e783d2285 226 Gene3D G3DSA:3.40.630.70 61 223 3.0E-68 T 12-10-2018 PA257_2938 6af0c1bf2fedb74bf470fc9e783d2285 226 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 215 2.8E-64 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 PA257_2938 6af0c1bf2fedb74bf470fc9e783d2285 226 Gene3D G3DSA:2.30.210.20 1 60 5.0E-26 T 12-10-2018 PA257_2938 6af0c1bf2fedb74bf470fc9e783d2285 226 SUPERFAMILY SSF55729 2 220 5.61E-94 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_2938 6af0c1bf2fedb74bf470fc9e783d2285 226 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 226 100.461 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 PA257_2938 6af0c1bf2fedb74bf470fc9e783d2285 226 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 204 8.0E-76 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 PA257_0819 c9742661c1bdf3d4f9f065fb96fb1ae3 72 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 20 70 2.4E-20 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PA257_0819 c9742661c1bdf3d4f9f065fb96fb1ae3 72 PRINTS PR01650 Bacterial translocase SecE signature 37 57 4.3E-18 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 PA257_0819 c9742661c1bdf3d4f9f065fb96fb1ae3 72 PRINTS PR01650 Bacterial translocase SecE signature 13 33 4.3E-18 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 PA257_0819 c9742661c1bdf3d4f9f065fb96fb1ae3 72 PRINTS PR01650 Bacterial translocase SecE signature 57 72 4.3E-18 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 PA257_0819 c9742661c1bdf3d4f9f065fb96fb1ae3 72 Gene3D G3DSA:1.20.5.1030 14 70 2.6E-17 T 12-10-2018 IPR038379 SecE superfamily PA257_0819 c9742661c1bdf3d4f9f065fb96fb1ae3 72 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 19 47 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PA257_0819 c9742661c1bdf3d4f9f065fb96fb1ae3 72 Hamap MF_00422 Protein translocase subunit SecE [secE]. 11 70 13.282 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PA257_0819 c9742661c1bdf3d4f9f065fb96fb1ae3 72 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 16 72 4.6E-21 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 SUPERFAMILY SSF47384 252 330 4.32E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 Gene3D G3DSA:1.20.1480.50 155 249 5.7E-9 T 12-10-2018 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 SUPERFAMILY SSF52172 516 633 2.28E-39 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 SUPERFAMILY SSF158472 192 239 3.14E-6 T 12-10-2018 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 492 6.4E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 Pfam PF00072 Response regulator receiver domain 517 628 1.6E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 Gene3D G3DSA:1.10.287.130 251 330 6.7E-26 T 12-10-2018 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 SMART SM00387 378 494 7.5E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 Gene3D G3DSA:3.40.50.12740 515 647 3.6E-46 T 12-10-2018 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 1.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 1.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 1.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 1.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 330 1.5E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 SMART SM00448 515 628 3.5E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 SMART SM00304 191 243 1.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 35 111 1.8E-9 T 12-10-2018 IPR019247 Histidine kinase BarA, N-terminal PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 SUPERFAMILY SSF55874 319 494 6.42E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 SMART SM00388 265 330 1.3E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4171 7f66c6fd632d6edb5ce8a52f85a8e857 651 Gene3D G3DSA:3.30.565.10 331 497 1.2E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2696 2ddbdf1d4b6a333b1919d052ef3653ce 94 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 92 9.4E-19 T 12-10-2018 IPR008473 Putative 3TM holin, Phage holin 3 PA257_6723 a5040bc72332d751d79564b8946a21be 701 SMART SM00471 41 153 6.0E-8 T 12-10-2018 IPR003607 HD/PDEase domain PA257_6723 a5040bc72332d751d79564b8946a21be 701 Gene3D G3DSA:1.10.3210.10 4 190 6.9E-75 T 12-10-2018 PA257_6723 a5040bc72332d751d79564b8946a21be 701 Pfam PF13328 HD domain 26 175 1.1E-51 T 12-10-2018 IPR003607 HD/PDEase domain PA257_6723 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF55021 624 699 1.93E-7 T 12-10-2018 PA257_6723 a5040bc72332d751d79564b8946a21be 701 Gene3D G3DSA:3.10.20.30 381 454 2.3E-30 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_6723 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF81301 181 392 1.36E-61 T 12-10-2018 PA257_6723 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF81271 375 447 1.72E-22 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PA257_6723 a5040bc72332d751d79564b8946a21be 701 SMART SM00954 235 345 1.2E-64 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 PA257_6723 a5040bc72332d751d79564b8946a21be 701 Pfam PF13291 ACT domain 622 698 1.5E-15 T 12-10-2018 IPR002912 ACT domain PA257_6723 a5040bc72332d751d79564b8946a21be 701 Gene3D G3DSA:3.30.70.260 622 701 9.6E-14 T 12-10-2018 PA257_6723 a5040bc72332d751d79564b8946a21be 701 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 3.1E-37 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 PA257_6723 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF109604 6 191 1.44E-70 T 12-10-2018 PA257_6723 a5040bc72332d751d79564b8946a21be 701 Gene3D G3DSA:3.30.460.10 193 325 2.4E-49 T 12-10-2018 PA257_6723 a5040bc72332d751d79564b8946a21be 701 Pfam PF02824 TGS domain 388 447 3.8E-19 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 PA257_6723 a5040bc72332d751d79564b8946a21be 701 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 697 4.8E-245 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 PA257_6519 18126d7d6463bbb99172d1d1e89601f5 210 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 65 184 3.9E-22 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PA257_5107 24d8b309fc4b5c19019433debc037621 773 SMART SM00490 632 712 2.3E-21 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_5107 24d8b309fc4b5c19019433debc037621 773 Gene3D G3DSA:3.40.50.300 520 726 9.4E-81 T 12-10-2018 PA257_5107 24d8b309fc4b5c19019433debc037621 773 Gene3D G3DSA:1.20.120.850 535 760 9.4E-81 T 12-10-2018 PA257_5107 24d8b309fc4b5c19019433debc037621 773 SUPERFAMILY SSF52540 514 766 2.72E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5107 24d8b309fc4b5c19019433debc037621 773 SMART SM00487 298 482 7.9E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_5107 24d8b309fc4b5c19019433debc037621 773 Gene3D G3DSA:3.40.50.10810 303 514 2.0E-67 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PA257_5107 24d8b309fc4b5c19019433debc037621 773 SUPERFAMILY SSF52540 277 513 9.01E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5107 24d8b309fc4b5c19019433debc037621 773 Pfam PF00271 Helicase conserved C-terminal domain 603 712 5.6E-17 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_5107 24d8b309fc4b5c19019433debc037621 773 Pfam PF00176 SNF2 family N-terminal domain 320 585 1.3E-63 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 PA257_1474 756997e9a62f76417b01b7017ff23a49 83 Gene3D G3DSA:3.30.1320.10 1 82 3.1E-31 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1474 756997e9a62f76417b01b7017ff23a49 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.032 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1474 756997e9a62f76417b01b7017ff23a49 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 4.5E-28 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1474 756997e9a62f76417b01b7017ff23a49 83 Pfam PF00886 Ribosomal protein S16 8 68 2.4E-24 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1474 756997e9a62f76417b01b7017ff23a49 83 SUPERFAMILY SSF54565 1 78 2.22E-28 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_4923 c571a368966dae0f8a011790b6089809 182 Pfam PF01292 Prokaryotic cytochrome b561 9 179 1.1E-24 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PA257_4923 c571a368966dae0f8a011790b6089809 182 SUPERFAMILY SSF81342 4 179 1.1E-37 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PA257_1427 fd384833d1ac28f7d77f2606ca1b47cd 258 Gene3D G3DSA:3.40.50.300 1 251 2.8E-68 T 12-10-2018 PA257_1427 fd384833d1ac28f7d77f2606ca1b47cd 258 Pfam PF00005 ABC transporter 17 164 1.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1427 fd384833d1ac28f7d77f2606ca1b47cd 258 SUPERFAMILY SSF52540 2 227 8.71E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1427 fd384833d1ac28f7d77f2606ca1b47cd 258 SMART SM00382 26 213 1.5E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1427 fd384833d1ac28f7d77f2606ca1b47cd 258 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2079 7e82fa408f3e66517ab5487be0e7f5f9 446 Pfam PF05230 MASE2 domain 2 91 2.7E-29 T 12-10-2018 IPR007894 MASE2 PA257_2079 7e82fa408f3e66517ab5487be0e7f5f9 446 SUPERFAMILY SSF55073 204 393 1.11E-61 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_2079 7e82fa408f3e66517ab5487be0e7f5f9 446 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 208 390 1.1E-39 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PA257_2079 7e82fa408f3e66517ab5487be0e7f5f9 446 SMART SM00044 171 381 2.0E-34 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PA257_2079 7e82fa408f3e66517ab5487be0e7f5f9 446 Gene3D G3DSA:3.30.70.1230 202 399 2.7E-84 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_5732 68bb78763e09049362cd7e6d495c7086 141 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5732 68bb78763e09049362cd7e6d495c7086 141 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 2.7E-11 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5732 68bb78763e09049362cd7e6d495c7086 141 Gene3D G3DSA:3.30.700.10 7 138 9.6E-27 T 12-10-2018 PA257_5732 68bb78763e09049362cd7e6d495c7086 141 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 28 120 1.6E-17 T 12-10-2018 IPR031982 Type IV minor pilin ComP PA257_5732 68bb78763e09049362cd7e6d495c7086 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 8.0E-11 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5732 68bb78763e09049362cd7e6d495c7086 141 SUPERFAMILY SSF54523 7 131 3.61E-25 T 12-10-2018 PA257_5810 c92622b6aa65b438960a58b8f648a6a7 323 Gene3D G3DSA:3.40.50.720 20 317 9.4E-111 T 12-10-2018 PA257_5810 c92622b6aa65b438960a58b8f648a6a7 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 320 1.3E-25 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PA257_5810 c92622b6aa65b438960a58b8f648a6a7 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 290 5.2E-52 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PA257_5810 c92622b6aa65b438960a58b8f648a6a7 323 Gene3D G3DSA:3.40.50.720 102 289 9.4E-111 T 12-10-2018 PA257_5810 c92622b6aa65b438960a58b8f648a6a7 323 SUPERFAMILY SSF52283 17 141 4.54E-29 T 12-10-2018 PA257_5810 c92622b6aa65b438960a58b8f648a6a7 323 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PA257_5810 c92622b6aa65b438960a58b8f648a6a7 323 SUPERFAMILY SSF51735 106 291 3.2E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5558 641937d8ea64182e84f909a144773be3 1516 Gene3D G3DSA:2.60.40.1930 333 432 5.9E-8 T 12-10-2018 PA257_5558 641937d8ea64182e84f909a144773be3 1516 SMART SM01359 646 792 9.5E-29 T 12-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 PA257_5558 641937d8ea64182e84f909a144773be3 1516 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1045 1067 2.6E-4 T 12-10-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming PA257_5558 641937d8ea64182e84f909a144773be3 1516 Gene3D G3DSA:1.50.10.20 1039 1330 2.3E-11 T 12-10-2018 PA257_5558 641937d8ea64182e84f909a144773be3 1516 Pfam PF00207 Alpha-2-macroglobulin family 857 944 1.3E-23 T 12-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 PA257_5558 641937d8ea64182e84f909a144773be3 1516 SUPERFAMILY SSF48239 1043 1147 3.88E-14 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PA257_5558 641937d8ea64182e84f909a144773be3 1516 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 647 792 3.4E-14 T 12-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 PA257_5558 641937d8ea64182e84f909a144773be3 1516 Pfam PF01835 MG2 domain 332 428 4.6E-19 T 12-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 PA257_5558 641937d8ea64182e84f909a144773be3 1516 SMART SM01360 857 947 2.1E-26 T 12-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 PA257_1148 650795fe4e7e10e8449404b6e1e0327f 110 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 97 23.849 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PA257_1148 650795fe4e7e10e8449404b6e1e0327f 110 SUPERFAMILY SSF81301 2 103 6.54E-39 T 12-10-2018 PA257_1148 650795fe4e7e10e8449404b6e1e0327f 110 Pfam PF02410 Ribosomal silencing factor during starvation 3 96 1.2E-27 T 12-10-2018 PA257_1148 650795fe4e7e10e8449404b6e1e0327f 110 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 2 96 2.1E-38 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PA257_1148 650795fe4e7e10e8449404b6e1e0327f 110 Gene3D G3DSA:3.30.460.10 1 109 1.5E-38 T 12-10-2018 PA257_2607 61f2fa9328a9639e68317a5712bdd41e 298 SUPERFAMILY SSF53850 92 295 8.69E-26 T 12-10-2018 PA257_2607 61f2fa9328a9639e68317a5712bdd41e 298 SUPERFAMILY SSF46785 6 89 9.09E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2607 61f2fa9328a9639e68317a5712bdd41e 298 Gene3D G3DSA:3.40.190.290 96 279 2.7E-18 T 12-10-2018 PA257_2607 61f2fa9328a9639e68317a5712bdd41e 298 Pfam PF03466 LysR substrate binding domain 91 295 2.7E-21 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2607 61f2fa9328a9639e68317a5712bdd41e 298 Gene3D G3DSA:1.10.10.10 2 89 1.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2607 61f2fa9328a9639e68317a5712bdd41e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2607 61f2fa9328a9639e68317a5712bdd41e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2607 61f2fa9328a9639e68317a5712bdd41e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2607 61f2fa9328a9639e68317a5712bdd41e 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.3E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2386 dc2101a1773031c354bee6be022e66e7 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 219 3.0E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_2386 dc2101a1773031c354bee6be022e66e7 229 Gene3D G3DSA:1.10.3720.10 2 222 2.5E-52 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2386 dc2101a1773031c354bee6be022e66e7 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 5.4E-18 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_2386 dc2101a1773031c354bee6be022e66e7 229 SUPERFAMILY SSF161098 8 206 1.31E-41 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 Pfam PF00994 Probable molybdopterin binding domain 197 320 3.1E-22 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 SUPERFAMILY SSF53218 182 327 2.75E-38 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 Pfam PF03453 MoeA N-terminal region (domain I and II) 13 172 2.7E-46 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 SMART SM00852 185 322 1.1E-35 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 Gene3D G3DSA:2.170.190.11 55 146 2.3E-119 T 12-10-2018 PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 SUPERFAMILY SSF63867 332 403 9.94E-13 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 Gene3D G3DSA:2.40.340.10 332 389 2.3E-119 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 Gene3D G3DSA:3.90.105.10 32 179 2.3E-119 T 12-10-2018 PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 SUPERFAMILY SSF63882 11 181 2.09E-51 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 Gene3D G3DSA:3.40.980.10 180 331 2.3E-119 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily PA257_1249 7b56f01ef4c00f46ab341fb7ff310337 407 Pfam PF03454 MoeA C-terminal region (domain IV) 336 402 1.6E-14 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_3281 f6fec9b8c081015c7789398c419185bf 252 Gene3D G3DSA:1.25.40.590 14 189 6.0E-29 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily PA257_3281 f6fec9b8c081015c7789398c419185bf 252 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 21 233 3.0E-36 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU PA257_3281 f6fec9b8c081015c7789398c419185bf 252 Pfam PF09850 Type VI secretion system protein DotU 73 227 4.2E-30 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU PA257_4684 59732d81eddb7004764a85e7f176a1b7 250 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 12 246 56.31 T 12-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 PA257_4684 59732d81eddb7004764a85e7f176a1b7 250 Gene3D G3DSA:3.30.1600.10 28 169 5.2E-80 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily PA257_4684 59732d81eddb7004764a85e7f176a1b7 250 SUPERFAMILY SSF52467 3 247 6.55E-83 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_4684 59732d81eddb7004764a85e7f176a1b7 250 Gene3D G3DSA:3.40.50.1220 11 243 5.2E-80 T 12-10-2018 PA257_4684 59732d81eddb7004764a85e7f176a1b7 250 Pfam PF02146 Sir2 family 19 199 2.7E-50 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 PA257_1158 3c1dd956bf3be558fddc8a2b3deea179 301 Gene3D G3DSA:3.40.190.10 107 273 2.1E-54 T 12-10-2018 PA257_1158 3c1dd956bf3be558fddc8a2b3deea179 301 Gene3D G3DSA:1.10.10.10 11 97 5.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1158 3c1dd956bf3be558fddc8a2b3deea179 301 SUPERFAMILY SSF53850 101 293 5.27E-30 T 12-10-2018 PA257_1158 3c1dd956bf3be558fddc8a2b3deea179 301 Gene3D G3DSA:3.40.190.10 174 267 2.1E-54 T 12-10-2018 PA257_1158 3c1dd956bf3be558fddc8a2b3deea179 301 Pfam PF03466 LysR substrate binding domain 101 289 2.1E-30 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1158 3c1dd956bf3be558fddc8a2b3deea179 301 SUPERFAMILY SSF46785 10 123 1.15E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1158 3c1dd956bf3be558fddc8a2b3deea179 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 76 1.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1894 5f109a00ad99dad5da1e6a80ce5082c3 209 SUPERFAMILY SSF159709 26 202 9.02E-54 T 12-10-2018 IPR038058 PhnH-like superfamily PA257_1894 5f109a00ad99dad5da1e6a80ce5082c3 209 PIRSF PIRSF020680 10 207 6.7E-63 T 12-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PA257_1894 5f109a00ad99dad5da1e6a80ce5082c3 209 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 18 201 1.2E-57 T 12-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PA257_1894 5f109a00ad99dad5da1e6a80ce5082c3 209 Gene3D G3DSA:3.40.50.11310 14 203 2.2E-57 T 12-10-2018 IPR038058 PhnH-like superfamily PA257_1894 5f109a00ad99dad5da1e6a80ce5082c3 209 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 20 200 1.7E-52 T 12-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PA257_3810 7070b8ee040c44145bee6eb812615a6b 170 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 67 3.5E-7 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_3810 7070b8ee040c44145bee6eb812615a6b 170 Gene3D G3DSA:3.10.20.30 1 82 2.6E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_3810 7070b8ee040c44145bee6eb812615a6b 170 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 47 55 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PA257_3810 7070b8ee040c44145bee6eb812615a6b 170 SUPERFAMILY SSF54292 9 96 5.11E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_3810 7070b8ee040c44145bee6eb812615a6b 170 Pfam PF01799 [2Fe-2S] binding domain 81 153 3.7E-31 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PA257_3810 7070b8ee040c44145bee6eb812615a6b 170 SUPERFAMILY SSF47741 92 163 2.22E-30 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily PA257_3810 7070b8ee040c44145bee6eb812615a6b 170 Gene3D G3DSA:1.10.150.120 83 167 1.3E-32 T 12-10-2018 PA257_1795 ab81ad4fe4b86eda17e794bb85af857e 299 SUPERFAMILY SSF103481 182 287 8.63E-9 T 12-10-2018 PA257_1795 ab81ad4fe4b86eda17e794bb85af857e 299 TIGRFAM TIGR00688 rarD: protein RarD 6 260 8.2E-56 T 12-10-2018 IPR004626 RarD protein GO:0005887 PA257_1795 ab81ad4fe4b86eda17e794bb85af857e 299 SUPERFAMILY SSF103481 46 147 8.37E-7 T 12-10-2018 PA257_1881 f8aaf4363cea4d57711c6e08d2bae5e3 636 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 42 0.0011 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PA257_1881 f8aaf4363cea4d57711c6e08d2bae5e3 636 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 579 627 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_1881 f8aaf4363cea4d57711c6e08d2bae5e3 636 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 15 634 0.0 T 12-10-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PA257_1881 f8aaf4363cea4d57711c6e08d2bae5e3 636 SUPERFAMILY SSF49503 507 634 1.92E-35 T 12-10-2018 IPR008972 Cupredoxin PA257_1881 f8aaf4363cea4d57711c6e08d2bae5e3 636 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 576 627 1.0E-4 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_1881 f8aaf4363cea4d57711c6e08d2bae5e3 636 Gene3D G3DSA:2.130.10.10 56 515 4.9E-205 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_1881 f8aaf4363cea4d57711c6e08d2bae5e3 636 Gene3D G3DSA:2.60.40.420 516 634 4.2E-35 T 12-10-2018 IPR008972 Cupredoxin PA257_1881 f8aaf4363cea4d57711c6e08d2bae5e3 636 SUPERFAMILY SSF50974 60 504 2.22E-133 T 12-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 PA257_1881 f8aaf4363cea4d57711c6e08d2bae5e3 636 Hamap MF_00716 Nitrous-oxide reductase [nosZ]. 2 635 61.235 T 12-10-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PA257_5321 8ed475f9af5beb74eaed993ac096a1dd 321 SUPERFAMILY SSF54523 43 320 3.14E-9 T 12-10-2018 PA257_5321 8ed475f9af5beb74eaed993ac096a1dd 321 SUPERFAMILY SSF47781 218 272 3.78E-6 T 12-10-2018 IPR010994 RuvA domain 2-like PA257_5321 8ed475f9af5beb74eaed993ac096a1dd 321 Gene3D G3DSA:1.10.40.60 102 148 3.2E-11 T 12-10-2018 IPR038072 GspK, central domain superfamily PA257_5321 8ed475f9af5beb74eaed993ac096a1dd 321 Gene3D G3DSA:1.10.40.60 199 219 1.4E-10 T 12-10-2018 IPR038072 GspK, central domain superfamily PA257_5321 8ed475f9af5beb74eaed993ac096a1dd 321 Gene3D G3DSA:3.30.1300.30 282 306 1.4E-10 T 12-10-2018 PA257_5321 8ed475f9af5beb74eaed993ac096a1dd 321 Gene3D G3DSA:3.30.1300.30 47 101 3.2E-11 T 12-10-2018 PA257_5321 8ed475f9af5beb74eaed993ac096a1dd 321 SUPERFAMILY SSF158544 104 218 2.46E-7 T 12-10-2018 IPR038072 GspK, central domain superfamily PA257_5321 8ed475f9af5beb74eaed993ac096a1dd 321 Gene3D G3DSA:1.10.40.60 220 281 1.4E-10 T 12-10-2018 IPR038072 GspK, central domain superfamily PA257_5321 8ed475f9af5beb74eaed993ac096a1dd 321 Pfam PF03934 Type II secretion system (T2SS), protein K 31 313 1.4E-66 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PA257_5321 8ed475f9af5beb74eaed993ac096a1dd 321 PIRSF PIRSF002786 1 321 7.1E-92 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 Gene3D G3DSA:1.20.1110.10 252 385 8.2E-20 T 12-10-2018 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 Gene3D G3DSA:1.20.1110.10 682 805 3.6E-8 T 12-10-2018 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 Pfam PF00702 haloacid dehalogenase-like hydrolase 369 657 6.5E-20 T 12-10-2018 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 Pfam PF00690 Cation transporter/ATPase, N-terminus 29 94 3.5E-14 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF56784 371 742 1.5E-37 T 12-10-2018 IPR036412 HAD-like superfamily PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 SMART SM00831 26 99 8.8E-17 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 Gene3D G3DSA:3.40.50.1000 594 681 9.6E-22 T 12-10-2018 IPR023214 HAD superfamily PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF81660 368 551 2.01E-36 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 Gene3D G3DSA:3.40.1110.10 386 554 2.4E-52 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 Pfam PF00689 Cation transporting ATPase, C-terminus 726 893 1.5E-15 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 17 902 0.0 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 Gene3D G3DSA:2.70.150.10 125 251 9.2E-32 T 12-10-2018 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 856 877 5.6E-89 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 771 787 5.6E-89 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 286 302 5.6E-89 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 719 730 5.6E-89 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 407 420 5.6E-89 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 303 322 5.6E-89 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 701 716 5.6E-89 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 806 827 5.6E-89 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 751 764 5.6E-89 T 12-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 Pfam PF00122 E1-E2 ATPase 147 353 3.8E-43 T 12-10-2018 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 392 7.6E-20 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 732 1.3E-28 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF81665 42 900 6.02E-99 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 375 381 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PA257_6099 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF81653 161 273 2.35E-26 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PA257_4525 c584181d88abb7a7bf30c3eef4db4113 435 Gene3D G3DSA:3.40.50.300 45 184 1.9E-11 T 12-10-2018 PA257_4525 c584181d88abb7a7bf30c3eef4db4113 435 SUPERFAMILY SSF52540 8 194 1.77E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4525 c584181d88abb7a7bf30c3eef4db4113 435 SUPERFAMILY SSF52317 235 428 1.92E-31 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4525 c584181d88abb7a7bf30c3eef4db4113 435 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 239 418 7.5E-31 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 PA257_4525 c584181d88abb7a7bf30c3eef4db4113 435 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 187 5.9E-13 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PA257_4525 c584181d88abb7a7bf30c3eef4db4113 435 Gene3D G3DSA:3.40.50.880 237 414 7.0E-11 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4525 c584181d88abb7a7bf30c3eef4db4113 435 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 6 421 39.158 T 12-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 PA257_4525 c584181d88abb7a7bf30c3eef4db4113 435 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 10 430 4.2E-82 T 12-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 PA257_6668 8d2144e80bc2b28c1b6f95562a01c53c 556 SUPERFAMILY SSF52540 8 530 4.55E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6668 8d2144e80bc2b28c1b6f95562a01c53c 556 Pfam PF13361 UvrD-like helicase C-terminal domain 225 520 1.6E-21 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PA257_6668 8d2144e80bc2b28c1b6f95562a01c53c 556 Gene3D G3DSA:1.10.486.10 333 461 6.8E-31 T 12-10-2018 PA257_6668 8d2144e80bc2b28c1b6f95562a01c53c 556 Pfam PF13245 AAA domain 21 201 2.9E-21 T 12-10-2018 PA257_6668 8d2144e80bc2b28c1b6f95562a01c53c 556 Gene3D G3DSA:3.40.50.300 228 528 6.8E-31 T 12-10-2018 PA257_6668 8d2144e80bc2b28c1b6f95562a01c53c 556 Gene3D G3DSA:3.40.50.300 12 223 2.9E-40 T 12-10-2018 PA257_3223 84a48bbcea19a24dbbd8d7ad5376c44d 312 Pfam PF03466 LysR substrate binding domain 93 300 2.6E-38 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3223 84a48bbcea19a24dbbd8d7ad5376c44d 312 SUPERFAMILY SSF53850 94 303 1.18E-38 T 12-10-2018 PA257_3223 84a48bbcea19a24dbbd8d7ad5376c44d 312 SUPERFAMILY SSF46785 7 92 1.18E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3223 84a48bbcea19a24dbbd8d7ad5376c44d 312 Gene3D G3DSA:1.10.10.10 7 94 6.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3223 84a48bbcea19a24dbbd8d7ad5376c44d 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 9.9E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3223 84a48bbcea19a24dbbd8d7ad5376c44d 312 Gene3D G3DSA:3.40.190.10 170 272 1.0E-51 T 12-10-2018 PA257_3223 84a48bbcea19a24dbbd8d7ad5376c44d 312 Gene3D G3DSA:3.40.190.10 97 297 1.0E-51 T 12-10-2018 PA257_6313 550cab6be923f1fff78fa28b013443ce 1118 SUPERFAMILY SSF82861 830 914 2.22E-7 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PA257_6313 550cab6be923f1fff78fa28b013443ce 1118 SUPERFAMILY SSF50182 916 981 4.58E-17 T 12-10-2018 IPR010920 LSM domain superfamily PA257_6313 550cab6be923f1fff78fa28b013443ce 1118 Pfam PF00924 Mechanosensitive ion channel 873 1071 1.4E-51 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PA257_6313 550cab6be923f1fff78fa28b013443ce 1118 Gene3D G3DSA:2.30.30.60 931 980 1.1E-13 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PA257_6313 550cab6be923f1fff78fa28b013443ce 1118 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 493 812 1.8E-105 T 12-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 PA257_6313 550cab6be923f1fff78fa28b013443ce 1118 Pfam PF12795 Mechanosensitive ion channel porin domain 38 273 3.4E-56 T 12-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain PA257_6313 550cab6be923f1fff78fa28b013443ce 1118 SUPERFAMILY SSF82689 983 1083 3.79E-21 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PA257_6313 550cab6be923f1fff78fa28b013443ce 1118 Gene3D G3DSA:3.30.70.100 984 1077 1.7E-16 T 12-10-2018 PA257_6313 550cab6be923f1fff78fa28b013443ce 1118 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 945 979 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 1.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 1.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 1.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 SUPERFAMILY SSF46894 146 218 1.84E-22 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 SMART SM00448 12 125 3.8E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 1.4E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 Pfam PF00072 Response regulator receiver domain 15 126 8.1E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 Gene3D G3DSA:3.40.50.12740 12 219 7.5E-70 T 12-10-2018 PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 SUPERFAMILY SSF52172 11 143 4.55E-37 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1286 a2052e4cde379f185910616fa5c80dd8 219 SMART SM00421 156 213 8.2E-28 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_6216 aad12833c84219f04c4381299e84a50b 139 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.601 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 PA257_6216 aad12833c84219f04c4381299e84a50b 139 SUPERFAMILY SSF54995 1 102 9.55E-37 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6216 aad12833c84219f04c4381299e84a50b 139 Pfam PF01250 Ribosomal protein S6 3 91 5.9E-27 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6216 aad12833c84219f04c4381299e84a50b 139 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 PA257_6216 aad12833c84219f04c4381299e84a50b 139 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 8.0E-34 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6216 aad12833c84219f04c4381299e84a50b 139 Gene3D G3DSA:3.30.70.60 1 92 3.0E-31 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PA257_0408 49f0f22881f30d9fd8e06a20036e09ad 159 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PA257_0408 49f0f22881f30d9fd8e06a20036e09ad 159 Pfam PF00293 NUDIX domain 7 146 8.9E-26 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_0408 49f0f22881f30d9fd8e06a20036e09ad 159 SUPERFAMILY SSF55811 4 154 1.76E-29 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_0408 49f0f22881f30d9fd8e06a20036e09ad 159 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.33 T 12-10-2018 IPR022927 RNA pyrophosphohydrolase RppH PA257_0408 49f0f22881f30d9fd8e06a20036e09ad 159 Gene3D G3DSA:3.90.79.10 1 157 3.0E-43 T 12-10-2018 PA257_0408 49f0f22881f30d9fd8e06a20036e09ad 159 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.4E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PA257_0408 49f0f22881f30d9fd8e06a20036e09ad 159 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.4E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 26 57 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 SUPERFAMILY SSF54534 89 164 1.57E-22 T 12-10-2018 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 SUPERFAMILY SSF46557 13 85 1.57E-24 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 Gene3D G3DSA:1.10.287.180 11 82 1.1E-27 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 165 52.865 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 165 7.9E-85 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 Gene3D G3DSA:3.10.50.30 83 166 6.2E-30 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 PIRSF PIRSF006092 9 166 5.7E-48 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 1.6E-24 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 163 28.657 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PA257_2453 5aa6fb2fcc7dca7971411966c5d1c9ad 168 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 92 164 5.2E-24 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PA257_6636 d097ea6dca9e0d0d69e6485369fd1946 303 SUPERFAMILY SSF47823 4 96 5.3E-19 T 12-10-2018 PA257_6636 d097ea6dca9e0d0d69e6485369fd1946 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 1.4E-23 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PA257_6636 d097ea6dca9e0d0d69e6485369fd1946 303 Gene3D G3DSA:1.10.150.130 2 96 1.1E-19 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_6636 d097ea6dca9e0d0d69e6485369fd1946 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 293 7.4E-109 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 PA257_6636 d097ea6dca9e0d0d69e6485369fd1946 303 SUPERFAMILY SSF56349 104 289 7.06E-52 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_6636 d097ea6dca9e0d0d69e6485369fd1946 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 291 57.648 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD PA257_6636 d097ea6dca9e0d0d69e6485369fd1946 303 Pfam PF00589 Phage integrase family 111 277 2.4E-42 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_6636 d097ea6dca9e0d0d69e6485369fd1946 303 Gene3D G3DSA:1.10.443.10 109 285 1.9E-55 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 SMART SM00387 332 441 1.2E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 290 1.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 SMART SM00304 171 226 6.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 SUPERFAMILY SSF55874 281 439 2.1E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 SMART SM00388 227 291 3.8E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 SUPERFAMILY SSF158472 172 225 3.14E-7 T 12-10-2018 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 440 3.6E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 Gene3D G3DSA:1.10.287.130 175 291 1.7E-26 T 12-10-2018 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 6.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 6.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 6.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 Pfam PF00672 HAMP domain 172 222 3.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 SUPERFAMILY SSF47384 210 290 3.14E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2090 d5eb7405c45952f862eb6454c041fcb4 445 Gene3D G3DSA:3.30.565.10 294 438 3.9E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0561 225c22e06b0519d5e10a78f392d4b3d8 442 SUPERFAMILY SSF111369 108 344 5.75E-94 T 12-10-2018 PA257_0561 225c22e06b0519d5e10a78f392d4b3d8 442 Gene3D G3DSA:1.10.287.470 156 215 1.0E-128 T 12-10-2018 PA257_0561 225c22e06b0519d5e10a78f392d4b3d8 442 Gene3D G3DSA:2.40.30.170 107 347 1.0E-128 T 12-10-2018 PA257_0561 225c22e06b0519d5e10a78f392d4b3d8 442 Gene3D G3DSA:2.40.50.100 121 251 1.0E-128 T 12-10-2018 PA257_0561 225c22e06b0519d5e10a78f392d4b3d8 442 Gene3D G3DSA:2.40.420.20 348 417 1.0E-128 T 12-10-2018 PA257_0561 225c22e06b0519d5e10a78f392d4b3d8 442 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 97 419 7.6E-77 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_0561 225c22e06b0519d5e10a78f392d4b3d8 442 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 117 337 5.6E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_0561 225c22e06b0519d5e10a78f392d4b3d8 442 Pfam PF00529 HlyD membrane-fusion protein of T1SS 338 405 6.0E-9 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_5594 726bd556168810d9ec6bda12e5710f7f 188 SMART SM00644 18 169 2.8E-60 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_5594 726bd556168810d9ec6bda12e5710f7f 188 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 169 4.3E-27 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_5594 726bd556168810d9ec6bda12e5710f7f 188 Gene3D G3DSA:3.40.80.10 5 187 1.8E-58 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_5594 726bd556168810d9ec6bda12e5710f7f 188 SUPERFAMILY SSF55846 7 181 1.11E-65 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_3542 fec251e208c239f60c89e7ca1a1b54ae 404 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 11 295 3.3E-114 T 12-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PA257_3542 fec251e208c239f60c89e7ca1a1b54ae 404 SUPERFAMILY SSF55931 8 368 5.89E-86 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_3542 fec251e208c239f60c89e7ca1a1b54ae 404 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 404 77.83 T 12-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PA257_3542 fec251e208c239f60c89e7ca1a1b54ae 404 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 12 290 3.6E-88 T 12-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PA257_3542 fec251e208c239f60c89e7ca1a1b54ae 404 Gene3D G3DSA:3.30.590.20 6 358 3.4E-88 T 12-10-2018 PA257_6933 170f0f83d4b7403f2b2ac20dc2230e7b 585 Gene3D G3DSA:1.20.1530.20 3 386 1.5E-94 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_6933 170f0f83d4b7403f2b2ac20dc2230e7b 585 Pfam PF00999 Sodium/hydrogen exchanger family 12 376 9.1E-64 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PA257_4844 1edb490665a03525b1b033127e32e734 275 Pfam PF13276 HTH-like domain 31 83 2.1E-13 T 12-10-2018 IPR025948 HTH-like domain PA257_4844 1edb490665a03525b1b033127e32e734 275 SUPERFAMILY SSF53098 101 263 3.04E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_4844 1edb490665a03525b1b033127e32e734 275 Gene3D G3DSA:3.30.420.10 99 249 3.5E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_4844 1edb490665a03525b1b033127e32e734 275 Pfam PF00665 Integrase core domain 108 223 6.9E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_0011 1edb490665a03525b1b033127e32e734 275 Pfam PF13276 HTH-like domain 31 83 2.1E-13 T 12-10-2018 IPR025948 HTH-like domain PA257_0011 1edb490665a03525b1b033127e32e734 275 SUPERFAMILY SSF53098 101 263 3.04E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_0011 1edb490665a03525b1b033127e32e734 275 Gene3D G3DSA:3.30.420.10 99 249 3.5E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_0011 1edb490665a03525b1b033127e32e734 275 Pfam PF00665 Integrase core domain 108 223 6.9E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_4229 1776b5d56bb0b0baa8c165a2b0241b2b 202 Gene3D G3DSA:1.10.760.10 40 202 1.2E-80 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4229 1776b5d56bb0b0baa8c165a2b0241b2b 202 SUPERFAMILY SSF46626 15 192 7.07E-31 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4229 1776b5d56bb0b0baa8c165a2b0241b2b 202 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 179 5.2E-84 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PA257_4229 1776b5d56bb0b0baa8c165a2b0241b2b 202 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 178 8.2E-86 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PA257_6348 96df22e9c333fa08211c677c7c995bd2 559 TIGRFAM TIGR01839 PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II 1 559 0.0 T 12-10-2018 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II GO:0016746|GO:0042619 PA257_6348 96df22e9c333fa08211c677c7c995bd2 559 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 75 243 2.2E-65 T 12-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 PA257_6348 96df22e9c333fa08211c677c7c995bd2 559 SUPERFAMILY SSF53474 198 489 4.16E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4179 50aea79ff00570787301dc7450040e83 143 Pfam PF01047 MarR family 39 96 4.2E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4179 50aea79ff00570787301dc7450040e83 143 Gene3D G3DSA:1.10.10.10 4 143 2.5E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4179 50aea79ff00570787301dc7450040e83 143 SUPERFAMILY SSF46785 3 142 8.2E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4179 50aea79ff00570787301dc7450040e83 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 1.5E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4179 50aea79ff00570787301dc7450040e83 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 1.5E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4179 50aea79ff00570787301dc7450040e83 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 1.5E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4179 50aea79ff00570787301dc7450040e83 143 SMART SM00347 32 132 3.2E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 Pfam PF12848 ABC transporter 217 295 9.5E-30 T 12-10-2018 IPR032781 ABC-transporter extension domain PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 Gene3D G3DSA:3.40.50.300 276 534 1.5E-52 T 12-10-2018 PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 Pfam PF00005 ABC transporter 328 459 5.3E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 SUPERFAMILY SSF52540 298 518 1.54E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 SMART SM00382 26 223 9.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 SMART SM00382 337 504 2.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 SUPERFAMILY SSF52540 2 256 2.08E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 Pfam PF00005 ABC transporter 18 178 4.0E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6606 00d4709dd69d3f95237bb9788a6ad66e 638 Gene3D G3DSA:3.40.50.300 7 274 2.5E-56 T 12-10-2018 PA257_1326 ac977a962064ea0a060769749fe8813f 336 Gene3D G3DSA:3.40.50.150 50 314 5.9E-76 T 12-10-2018 PA257_1326 ac977a962064ea0a060769749fe8813f 336 PIRSF PIRSF029038 6 326 2.3E-157 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 PA257_1326 ac977a962064ea0a060769749fe8813f 336 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 16 316 55.377 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 PA257_1326 ac977a962064ea0a060769749fe8813f 336 Pfam PF05971 Protein of unknown function (DUF890) 14 314 9.3E-155 T 12-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 PA257_1326 ac977a962064ea0a060769749fe8813f 336 SUPERFAMILY SSF53335 54 313 3.41E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1129 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 Pfam PF13520 Amino acid permease 63 451 6.2E-40 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_1129 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 TIGRFAM TIGR00908 2A0305: ethanolamine permease 26 470 7.2E-220 T 12-10-2018 IPR004757 Ethanolamine permease PA257_1129 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 Gene3D G3DSA:1.20.1740.10 30 473 7.7E-55 T 12-10-2018 PA257_1129 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 PIRSF PIRSF006060 11 479 4.2E-70 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_6520 4391c7b9ca167d75cb3003a2a8a9751d 427 PIRSF PIRSF006066 1 427 3.9E-157 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PA257_6520 4391c7b9ca167d75cb3003a2a8a9751d 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 5.0E-149 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PA257_6520 4391c7b9ca167d75cb3003a2a8a9751d 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 1.8E-124 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PA257_6254 20a57aafdf6f8b60142e022471246ae8 205 SUPERFAMILY SSF55811 9 204 7.72E-50 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_6254 20a57aafdf6f8b60142e022471246ae8 205 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 195 7.6E-53 T 12-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 PA257_6254 20a57aafdf6f8b60142e022471246ae8 205 Gene3D G3DSA:3.90.79.10 3 205 5.2E-66 T 12-10-2018 PA257_6254 20a57aafdf6f8b60142e022471246ae8 205 Pfam PF00293 NUDIX domain 52 174 8.0E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_6254 20a57aafdf6f8b60142e022471246ae8 205 ProSitePatterns PS00893 Nudix box signature. 93 114 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PA257_5984 f6788d028e9cf99b71ef68be5ddfa43e 118 Pfam PF04355 SmpA / OmlA family 1 43 7.9E-11 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PA257_5984 f6788d028e9cf99b71ef68be5ddfa43e 118 Gene3D G3DSA:3.30.1450.10 1 60 2.6E-16 T 12-10-2018 IPR037873 BamE-like PA257_5984 f6788d028e9cf99b71ef68be5ddfa43e 118 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 89 22.188 T 12-10-2018 IPR026592 Outer membrane protein assembly factor BamE PA257_6713 b3c41e56c84cf1444181d48e6e9bce26 78 PRINTS PR00607 Class IE cytochrome C signature 8 19 1.3E-7 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6713 b3c41e56c84cf1444181d48e6e9bce26 78 PRINTS PR00607 Class IE cytochrome C signature 19 29 1.3E-7 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6713 b3c41e56c84cf1444181d48e6e9bce26 78 PRINTS PR00607 Class IE cytochrome C signature 47 59 1.3E-7 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6713 b3c41e56c84cf1444181d48e6e9bce26 78 PRINTS PR00607 Class IE cytochrome C signature 62 73 1.3E-7 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6713 b3c41e56c84cf1444181d48e6e9bce26 78 Gene3D G3DSA:1.10.760.10 1 76 1.3E-28 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6713 b3c41e56c84cf1444181d48e6e9bce26 78 SUPERFAMILY SSF46626 3 73 4.65E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6713 b3c41e56c84cf1444181d48e6e9bce26 78 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 2 72 2.4E-15 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 SUPERFAMILY SSF51905 7 261 2.0E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.4E-5 T 12-10-2018 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 8.4E-5 T 12-10-2018 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 Gene3D G3DSA:1.10.150.570 567 620 4.8E-24 T 12-10-2018 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 Pfam PF13932 GidA associated domain 402 614 6.3E-77 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 Pfam PF01134 Glucose inhibited division protein A 8 399 8.6E-170 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 SMART SM01228 544 615 3.5E-42 T 12-10-2018 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 620 1.3E-278 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 622 42.543 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 Gene3D G3DSA:3.50.50.60 2 234 1.3E-88 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 Gene3D G3DSA:3.50.50.60 294 458 7.0E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6970 90f5f85afc7fac55f3cc619ea42cc6c9 630 Gene3D G3DSA:1.10.10.1800 459 548 1.0E-26 T 12-10-2018 PA257_4847 40e0d9734c66e924a45428eea58537e3 591 SUPERFAMILY SSF51735 416 544 9.87E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4847 40e0d9734c66e924a45428eea58537e3 591 Gene3D G3DSA:3.40.50.720 414 572 7.8E-32 T 12-10-2018 PA257_4847 40e0d9734c66e924a45428eea58537e3 591 Pfam PF00999 Sodium/hydrogen exchanger family 24 388 1.8E-70 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PA257_4847 40e0d9734c66e924a45428eea58537e3 591 Gene3D G3DSA:1.20.1530.20 18 396 6.3E-84 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_4847 40e0d9734c66e924a45428eea58537e3 591 Pfam PF02254 TrkA-N domain 416 526 2.0E-19 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PA257_4847 40e0d9734c66e924a45428eea58537e3 591 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 28 299 5.7E-79 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 PA257_4221 1b40548af25af48885edd2028c564f85 436 Gene3D G3DSA:3.30.9.10 133 354 8.7E-67 T 12-10-2018 PA257_4221 1b40548af25af48885edd2028c564f85 436 SUPERFAMILY SSF51905 37 403 4.32E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4221 1b40548af25af48885edd2028c564f85 436 Gene3D G3DSA:3.50.50.60 38 392 8.7E-67 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4221 1b40548af25af48885edd2028c564f85 436 Pfam PF01266 FAD dependent oxidoreductase 38 391 3.5E-51 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_6407 844399290c4e638a226b8588e7e0aa3e 141 Gene3D G3DSA:1.10.1660.10 1 121 1.9E-25 T 12-10-2018 PA257_6407 844399290c4e638a226b8588e7e0aa3e 141 SMART SM00422 4 72 5.1E-12 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_6407 844399290c4e638a226b8588e7e0aa3e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 6.1E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_6407 844399290c4e638a226b8588e7e0aa3e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 6.1E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_6407 844399290c4e638a226b8588e7e0aa3e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 6.1E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_6407 844399290c4e638a226b8588e7e0aa3e 141 Pfam PF13411 MerR HTH family regulatory protein 6 67 3.2E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_6407 844399290c4e638a226b8588e7e0aa3e 141 SUPERFAMILY SSF46955 5 123 9.89E-25 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_2576 439a76666231457c2d4022ea9fc54732 291 Pfam PF03466 LysR substrate binding domain 90 285 1.1E-25 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2576 439a76666231457c2d4022ea9fc54732 291 Gene3D G3DSA:3.40.190.290 92 289 3.5E-26 T 12-10-2018 PA257_2576 439a76666231457c2d4022ea9fc54732 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2576 439a76666231457c2d4022ea9fc54732 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2576 439a76666231457c2d4022ea9fc54732 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2576 439a76666231457c2d4022ea9fc54732 291 SUPERFAMILY SSF53850 91 286 1.07E-25 T 12-10-2018 PA257_2576 439a76666231457c2d4022ea9fc54732 291 Gene3D G3DSA:1.10.10.10 1 84 8.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2576 439a76666231457c2d4022ea9fc54732 291 SUPERFAMILY SSF46785 1 81 2.95E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2576 439a76666231457c2d4022ea9fc54732 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5753 4a2ef102f63dae56db517cd1a2b08b3d 108 SUPERFAMILY SSF57716 75 106 1.24E-7 T 12-10-2018 PA257_5753 4a2ef102f63dae56db517cd1a2b08b3d 108 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 78 102 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PA257_5753 4a2ef102f63dae56db517cd1a2b08b3d 108 Gene3D G3DSA:1.20.120.910 5 105 1.6E-22 T 12-10-2018 PA257_5753 4a2ef102f63dae56db517cd1a2b08b3d 108 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 73 103 1.9E-9 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PA257_0233 9f9a379152a280447444c4ba92770603 554 Gene3D G3DSA:3.40.1080.10 38 245 1.6E-18 T 12-10-2018 PA257_0233 9f9a379152a280447444c4ba92770603 554 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 10 554 6.9E-295 T 12-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 PA257_0233 9f9a379152a280447444c4ba92770603 554 SUPERFAMILY SSF100950 42 282 1.19E-35 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_0233 9f9a379152a280447444c4ba92770603 554 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 554 0.0 T 12-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 PA257_0233 9f9a379152a280447444c4ba92770603 554 SUPERFAMILY SSF100950 230 493 1.1E-22 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_2858 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 SUPERFAMILY SSF46785 5 146 3.37E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2858 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site PA257_2858 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 Pfam PF02082 Transcriptional regulator 4 85 3.4E-24 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type PA257_2858 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 Gene3D G3DSA:1.10.10.10 3 150 1.3E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2858 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 143 6.2E-30 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type PA257_2399 d61b7c110069e4b8a209e811d533317b 720 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 703 720 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_2399 d61b7c110069e4b8a209e811d533317b 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 174 2.5E-20 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_2399 d61b7c110069e4b8a209e811d533317b 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 720 1.9E-88 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_2399 d61b7c110069e4b8a209e811d533317b 720 Pfam PF00593 TonB dependent receptor 246 718 2.3E-54 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_2399 d61b7c110069e4b8a209e811d533317b 720 SUPERFAMILY SSF56935 49 720 1.1E-128 T 12-10-2018 PA257_2399 d61b7c110069e4b8a209e811d533317b 720 Gene3D G3DSA:2.170.130.10 52 184 6.0E-27 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_2399 d61b7c110069e4b8a209e811d533317b 720 Gene3D G3DSA:2.40.170.20 186 720 9.2E-100 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_1824 34182ce34d56b9a9b49fd43241fa2a1a 249 SMART SM00382 29 211 4.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1824 34182ce34d56b9a9b49fd43241fa2a1a 249 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1824 34182ce34d56b9a9b49fd43241fa2a1a 249 Pfam PF00005 ABC transporter 20 160 6.7E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1824 34182ce34d56b9a9b49fd43241fa2a1a 249 SUPERFAMILY SSF52540 5 233 1.15E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1824 34182ce34d56b9a9b49fd43241fa2a1a 249 Gene3D G3DSA:3.40.50.300 2 239 8.5E-59 T 12-10-2018 PA257_1170 fc7c53cb804c93ba4660b4303d73c0b9 160 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 146 23.492 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PA257_1170 fc7c53cb804c93ba4660b4303d73c0b9 160 Gene3D G3DSA:3.40.390.30 1 153 1.7E-51 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 PA257_1170 fc7c53cb804c93ba4660b4303d73c0b9 160 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 112 122 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site PA257_1170 fc7c53cb804c93ba4660b4303d73c0b9 160 SUPERFAMILY SSF55486 5 148 1.9E-46 T 12-10-2018 PA257_1170 fc7c53cb804c93ba4660b4303d73c0b9 160 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 143 5.4E-35 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PA257_1170 fc7c53cb804c93ba4660b4303d73c0b9 160 Pfam PF02130 Uncharacterized protein family UPF0054 19 142 1.1E-35 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PA257_0176 8abdb249db4bbf42c1c9435e71a0a65d 331 Gene3D G3DSA:2.60.120.1440 120 246 5.2E-19 T 12-10-2018 PA257_0176 8abdb249db4bbf42c1c9435e71a0a65d 331 Pfam PF16344 Domain of unknown function (DUF4974) 233 315 3.2E-9 T 12-10-2018 IPR032508 Protein FecR, C-terminal PA257_0176 8abdb249db4bbf42c1c9435e71a0a65d 331 Pfam PF16220 Domain of unknown function (DUF4880) 18 58 9.6E-12 T 12-10-2018 IPR032623 FecR, N-terminal PA257_0176 8abdb249db4bbf42c1c9435e71a0a65d 331 Pfam PF04773 FecR protein 125 215 2.5E-18 T 12-10-2018 IPR006860 FecR protein PA257_0176 8abdb249db4bbf42c1c9435e71a0a65d 331 Gene3D G3DSA:3.55.50.30 257 330 8.0E-9 T 12-10-2018 PA257_0176 8abdb249db4bbf42c1c9435e71a0a65d 331 PIRSF PIRSF018266 6 331 9.9E-87 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_6530 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6530 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 Pfam PF03466 LysR substrate binding domain 87 289 3.7E-33 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6530 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 SUPERFAMILY SSF53850 88 292 6.73E-33 T 12-10-2018 PA257_6530 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6530 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6530 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6530 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 SUPERFAMILY SSF46785 1 86 5.0E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6530 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 Gene3D G3DSA:3.40.190.290 91 290 1.5E-32 T 12-10-2018 PA257_6530 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 Gene3D G3DSA:1.10.10.10 1 84 4.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 Gene3D G3DSA:4.10.640.10 20 74 1.1E-27 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.5E-37 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 SUPERFAMILY SSF46911 3 74 2.62E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.983 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 2.9E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 2.9E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 2.9E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 2.9E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 2.0E-22 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6215 dbfded01c87925bee7d1bff9987c6438 76 Pfam PF01084 Ribosomal protein S18 19 68 3.1E-25 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_3558 fe1f216b932f575124f51409a6bacdb6 365 SUPERFAMILY SSF56059 122 254 5.59E-7 T 12-10-2018 PA257_3558 fe1f216b932f575124f51409a6bacdb6 365 Pfam PF11379 Protein of unknown function (DUF3182) 10 360 3.6E-140 T 12-10-2018 IPR021519 Protein of unknown function DUF3182 PA257_1175 8f5a4b53820691c6984dee37afd8901b 427 Gene3D G3DSA:3.40.640.10 69 317 2.6E-184 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_1175 8f5a4b53820691c6984dee37afd8901b 427 Gene3D G3DSA:3.90.1150.10 7 420 2.6E-184 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_1175 8f5a4b53820691c6984dee37afd8901b 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_1175 8f5a4b53820691c6984dee37afd8901b 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.701 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 PA257_1175 8f5a4b53820691c6984dee37afd8901b 427 SUPERFAMILY SSF53383 2 424 8.21E-135 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_1175 8f5a4b53820691c6984dee37afd8901b 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 424 4.0E-192 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 PA257_1175 8f5a4b53820691c6984dee37afd8901b 427 Pfam PF00202 Aminotransferase class-III 32 394 8.0E-77 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0822 0a2ff9556c282ff99118ee66c0bdfec5 231 PIRSF PIRSF002155 1 227 5.2E-75 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0822 0a2ff9556c282ff99118ee66c0bdfec5 231 Pfam PF00687 Ribosomal protein L1p/L10e family 34 220 9.1E-49 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PA257_0822 0a2ff9556c282ff99118ee66c0bdfec5 231 SUPERFAMILY SSF56808 6 225 6.93E-79 T 12-10-2018 IPR023674 Ribosomal protein L1-like PA257_0822 0a2ff9556c282ff99118ee66c0bdfec5 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0822 0a2ff9556c282ff99118ee66c0bdfec5 231 Gene3D G3DSA:3.30.190.20 21 225 2.7E-75 T 12-10-2018 PA257_0822 0a2ff9556c282ff99118ee66c0bdfec5 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.7E-102 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PA257_0822 0a2ff9556c282ff99118ee66c0bdfec5 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.014 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PA257_0822 0a2ff9556c282ff99118ee66c0bdfec5 231 Gene3D G3DSA:3.40.50.790 68 159 2.7E-75 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PA257_0715 004162f06d5e45530f194d80af7d959d 908 SMART SM01276 435 780 3.4E-8 T 12-10-2018 IPR031161 Peptidase family M60 domain PA257_0715 004162f06d5e45530f194d80af7d959d 908 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 547 857 2.6E-7 T 12-10-2018 IPR031161 Peptidase family M60 domain PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 SUPERFAMILY SSF52343 292 429 1.57E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 Gene3D G3DSA:2.40.30.10 204 300 8.7E-15 T 12-10-2018 PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 Pfam PF08022 FAD-binding domain 218 300 5.1E-8 T 12-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 Pfam PF00175 Oxidoreductase NAD-binding domain 315 411 1.3E-6 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 SUPERFAMILY SSF63380 211 302 4.48E-19 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 297 306 3.0E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 399 407 3.0E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 250 3.0E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 313 332 3.0E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 Gene3D G3DSA:3.40.50.80 309 434 1.7E-22 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_0688 cbf4336cd6e2b79ad3551ab0c067c085 434 Pfam PF01794 Ferric reductase like transmembrane component 40 165 2.0E-19 T 12-10-2018 IPR013130 Ferric reductase transmembrane component-like domain PA257_2278 a577eddb7e20e6d2f4558237dde722f7 519 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 457 5.1E-29 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PA257_2278 a577eddb7e20e6d2f4558237dde722f7 519 Gene3D G3DSA:3.30.420.40 2 250 1.9E-64 T 12-10-2018 PA257_2278 a577eddb7e20e6d2f4558237dde722f7 519 Gene3D G3DSA:3.30.420.40 251 517 1.7E-60 T 12-10-2018 PA257_2278 a577eddb7e20e6d2f4558237dde722f7 519 PIRSF PIRSF000538 4 513 2.3E-112 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PA257_2278 a577eddb7e20e6d2f4558237dde722f7 519 SUPERFAMILY SSF53067 258 500 8.03E-53 T 12-10-2018 PA257_2278 a577eddb7e20e6d2f4558237dde722f7 519 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 254 9.3E-45 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PA257_2278 a577eddb7e20e6d2f4558237dde722f7 519 SUPERFAMILY SSF53067 6 257 5.29E-57 T 12-10-2018 PA257_6209 1533af326fef14ff46475370df21684b 626 SUPERFAMILY SSF55073 454 609 2.9E-50 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_6209 1533af326fef14ff46475370df21684b 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 449 604 6.7E-49 T 12-10-2018 IPR000160 GGDEF domain PA257_6209 1533af326fef14ff46475370df21684b 626 Gene3D G3DSA:3.30.70.270 443 616 3.6E-59 T 12-10-2018 PA257_6209 1533af326fef14ff46475370df21684b 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 445 609 1.7E-48 T 12-10-2018 IPR000160 GGDEF domain PA257_6209 1533af326fef14ff46475370df21684b 626 SMART SM00267 438 610 7.0E-63 T 12-10-2018 IPR000160 GGDEF domain PA257_6209 1533af326fef14ff46475370df21684b 626 Pfam PF07695 7TM diverse intracellular signalling 184 387 7.1E-38 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 PA257_6209 1533af326fef14ff46475370df21684b 626 Pfam PF07696 7TMR-DISM extracellular 2 38 172 1.1E-25 T 12-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 PA257_6209 1533af326fef14ff46475370df21684b 626 Gene3D G3DSA:2.60.40.2380 34 174 2.2E-18 T 12-10-2018 PA257_0619 def91dbf3a409fa6226fc48792bc8b2f 312 Pfam PF03466 LysR substrate binding domain 90 293 3.2E-25 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0619 def91dbf3a409fa6226fc48792bc8b2f 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0619 def91dbf3a409fa6226fc48792bc8b2f 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0619 def91dbf3a409fa6226fc48792bc8b2f 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0619 def91dbf3a409fa6226fc48792bc8b2f 312 Gene3D G3DSA:3.40.190.10 166 262 1.1E-9 T 12-10-2018 PA257_0619 def91dbf3a409fa6226fc48792bc8b2f 312 SUPERFAMILY SSF46785 5 88 1.25E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0619 def91dbf3a409fa6226fc48792bc8b2f 312 Gene3D G3DSA:1.10.10.10 3 87 1.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0619 def91dbf3a409fa6226fc48792bc8b2f 312 Gene3D G3DSA:3.40.190.10 113 289 1.1E-9 T 12-10-2018 PA257_0619 def91dbf3a409fa6226fc48792bc8b2f 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.0E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0619 def91dbf3a409fa6226fc48792bc8b2f 312 SUPERFAMILY SSF53850 91 296 5.79E-25 T 12-10-2018 PA257_4278 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_4278 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_4278 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 2 172 1.1E-82 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_4278 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 5.9E-37 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_4120 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_4120 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_4120 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 2 172 1.1E-82 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_4120 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 5.9E-37 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_6622 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_6622 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_6622 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 2 172 1.1E-82 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_6622 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 5.9E-37 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_0296 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_0296 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_0296 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 2 172 1.1E-82 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_0296 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 5.9E-37 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_5263 d5637a653f9e300c26a7a894f382e762 626 Gene3D G3DSA:3.40.50.300 1 405 6.8E-27 T 12-10-2018 PA257_5263 d5637a653f9e300c26a7a894f382e762 626 Pfam PF13175 AAA ATPase domain 1 73 1.5E-20 T 12-10-2018 PA257_5263 d5637a653f9e300c26a7a894f382e762 626 Pfam PF13175 AAA ATPase domain 199 384 1.5E-18 T 12-10-2018 PA257_5263 d5637a653f9e300c26a7a894f382e762 626 SUPERFAMILY SSF52540 1 386 3.04E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 639 2.7E-238 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.8E-65 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.8E-65 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.8E-65 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 629 642 3.8E-65 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.8E-65 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.8E-65 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.8E-65 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 Pfam PF01578 Cytochrome C assembly protein 89 296 7.2E-56 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.6E-97 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.6E-97 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.6E-97 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.6E-97 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.6E-97 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.6E-97 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.6E-97 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.6E-97 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4314 67e62be752845e8f0a430f67eb3e2fa9 657 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 636 5.0E-128 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal PA257_3201 00262fb2fc04c6526ef6fa57dca83410 334 SUPERFAMILY SSF111369 45 235 1.09E-17 T 12-10-2018 PA257_3201 00262fb2fc04c6526ef6fa57dca83410 334 Gene3D G3DSA:2.40.30.170 220 315 7.3E-39 T 12-10-2018 PA257_3201 00262fb2fc04c6526ef6fa57dca83410 334 Gene3D G3DSA:1.10.287.470 79 184 7.3E-39 T 12-10-2018 PA257_3201 00262fb2fc04c6526ef6fa57dca83410 334 Gene3D G3DSA:2.40.50.100 45 219 7.3E-39 T 12-10-2018 PA257_3201 00262fb2fc04c6526ef6fa57dca83410 334 Gene3D G3DSA:2.40.420.20 316 326 7.3E-39 T 12-10-2018 PA257_3201 00262fb2fc04c6526ef6fa57dca83410 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 260 1.1E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_4854 4dfe65dee065ba225e9e51c0a5bf1b3b 564 Pfam PF00732 GMC oxidoreductase 6 302 1.7E-84 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_4854 4dfe65dee065ba225e9e51c0a5bf1b3b 564 PIRSF PIRSF000137 1 548 2.2E-141 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_4854 4dfe65dee065ba225e9e51c0a5bf1b3b 564 Gene3D G3DSA:1.10.1220.110 98 152 7.7E-172 T 12-10-2018 PA257_4854 4dfe65dee065ba225e9e51c0a5bf1b3b 564 Gene3D G3DSA:3.30.410.40 153 479 7.7E-172 T 12-10-2018 PA257_4854 4dfe65dee065ba225e9e51c0a5bf1b3b 564 SUPERFAMILY SSF54373 296 482 5.1E-41 T 12-10-2018 PA257_4854 4dfe65dee065ba225e9e51c0a5bf1b3b 564 Pfam PF05199 GMC oxidoreductase 396 534 4.6E-38 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PA257_4854 4dfe65dee065ba225e9e51c0a5bf1b3b 564 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 83 106 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_4854 4dfe65dee065ba225e9e51c0a5bf1b3b 564 SUPERFAMILY SSF51905 5 542 6.29E-91 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4854 4dfe65dee065ba225e9e51c0a5bf1b3b 564 Gene3D G3DSA:3.50.50.60 6 538 7.7E-172 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4854 4dfe65dee065ba225e9e51c0a5bf1b3b 564 Gene3D G3DSA:4.10.450.10 39 198 7.7E-172 T 12-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 PA257_3186 d0af8674fc92e832b4a432dacee3f91e 469 Pfam PF03313 Serine dehydratase alpha chain 198 463 6.9E-106 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit PA257_3186 d0af8674fc92e832b4a432dacee3f91e 469 SUPERFAMILY SSF143548 28 168 2.88E-44 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 PA257_3186 d0af8674fc92e832b4a432dacee3f91e 469 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 15 466 7.8E-217 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 PA257_3186 d0af8674fc92e832b4a432dacee3f91e 469 Gene3D G3DSA:3.30.1330.90 22 170 3.6E-54 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 PA257_3186 d0af8674fc92e832b4a432dacee3f91e 469 Pfam PF03315 Serine dehydratase beta chain 15 167 7.3E-58 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 PA257_4272 98d83033f55aa3f4dc2c0c96f281c115 126 SUPERFAMILY SSF49472 6 126 3.4E-43 T 12-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PA257_4272 98d83033f55aa3f4dc2c0c96f281c115 126 Pfam PF00576 HIUase/Transthyretin family 13 125 2.0E-35 T 12-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PA257_4272 98d83033f55aa3f4dc2c0c96f281c115 126 ProSitePatterns PS00768 Transthyretin signature 1. 16 31 - T 12-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PA257_4272 98d83033f55aa3f4dc2c0c96f281c115 126 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 11 126 4.1E-40 T 12-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 PA257_4272 98d83033f55aa3f4dc2c0c96f281c115 126 PRINTS PR00189 Transthyretin signature 104 126 1.2E-7 T 12-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PA257_4272 98d83033f55aa3f4dc2c0c96f281c115 126 PRINTS PR00189 Transthyretin signature 12 32 1.2E-7 T 12-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PA257_4272 98d83033f55aa3f4dc2c0c96f281c115 126 Gene3D G3DSA:2.60.40.180 5 126 1.1E-40 T 12-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PA257_4272 98d83033f55aa3f4dc2c0c96f281c115 126 ProSitePatterns PS00769 Transthyretin signature 2. 109 121 - T 12-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PA257_0389 a7381289681159ae63a7c08aad9b6b0e 344 Gene3D G3DSA:3.40.800.20 1 341 4.4E-121 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_0389 a7381289681159ae63a7c08aad9b6b0e 344 PRINTS PR01270 Histone deacetylase superfamily signature 274 284 1.3E-12 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_0389 a7381289681159ae63a7c08aad9b6b0e 344 PRINTS PR01270 Histone deacetylase superfamily signature 155 178 1.3E-12 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_0389 a7381289681159ae63a7c08aad9b6b0e 344 PRINTS PR01270 Histone deacetylase superfamily signature 188 203 1.3E-12 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_0389 a7381289681159ae63a7c08aad9b6b0e 344 SUPERFAMILY SSF52768 2 341 3.12E-85 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily PA257_0389 a7381289681159ae63a7c08aad9b6b0e 344 Pfam PF00850 Histone deacetylase domain 28 336 7.1E-61 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_4339 8752be372a06b409e99c9e0dd3e8ef8b 277 SUPERFAMILY SSF52540 8 266 1.47E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4339 8752be372a06b409e99c9e0dd3e8ef8b 277 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 8 247 7.2E-25 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PA257_4339 8752be372a06b409e99c9e0dd3e8ef8b 277 PIRSF PIRSF003092 3 270 1.2E-82 T 12-10-2018 IPR025501 ATP binding protein MinD PA257_4339 8752be372a06b409e99c9e0dd3e8ef8b 277 Gene3D G3DSA:3.40.50.300 8 249 7.0E-59 T 12-10-2018 PA257_6724 a9a48ce641746a8bdcf84bed6c2c4408 126 SUPERFAMILY SSF55298 1 125 3.93E-46 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_6724 a9a48ce641746a8bdcf84bed6c2c4408 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 2.3E-53 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 PA257_6724 a9a48ce641746a8bdcf84bed6c2c4408 126 Pfam PF01042 Endoribonuclease L-PSP 9 124 5.1E-43 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PA257_6724 a9a48ce641746a8bdcf84bed6c2c4408 126 Gene3D G3DSA:3.30.1330.40 3 126 1.6E-53 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_6724 a9a48ce641746a8bdcf84bed6c2c4408 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 PA257_1917 858cedfd1d4d7ede345678771031af6f 448 Gene3D G3DSA:3.40.50.1100 117 239 5.0E-189 T 12-10-2018 PA257_1917 858cedfd1d4d7ede345678771031af6f 448 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 440 1.9E-239 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 PA257_1917 858cedfd1d4d7ede345678771031af6f 448 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 109 123 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PA257_1917 858cedfd1d4d7ede345678771031af6f 448 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 448 257.687 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 PA257_1917 858cedfd1d4d7ede345678771031af6f 448 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 398 3.6E-57 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_1917 858cedfd1d4d7ede345678771031af6f 448 Gene3D G3DSA:3.40.50.1100 26 440 5.0E-189 T 12-10-2018 PA257_1917 858cedfd1d4d7ede345678771031af6f 448 SUPERFAMILY SSF53686 98 440 4.39E-55 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_5192 0c8a48c4659c47eb7d2d21ff94da0905 261 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 12 224 3.5E-88 T 12-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 PA257_5192 0c8a48c4659c47eb7d2d21ff94da0905 261 Pfam PF08900 Domain of unknown function (DUF1845) 11 221 1.8E-78 T 12-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 SMART SM00387 489 595 7.3E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 Pfam PF08448 PAS fold 264 370 8.9E-11 T 12-10-2018 IPR013656 PAS fold-4 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 SMART SM00091 258 323 1.2E-5 T 12-10-2018 IPR000014 PAS domain PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 540 5.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 5.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 5.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 554 5.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 SUPERFAMILY SSF47384 360 443 1.22E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 Pfam PF00512 His Kinase A (phospho-acceptor) domain 376 443 1.2E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 SMART SM00388 375 443 1.1E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 Gene3D G3DSA:3.30.565.10 448 595 3.6E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 Gene3D G3DSA:1.10.287.130 367 447 3.9E-17 T 12-10-2018 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 Pfam PF16767 Sensor domain of alginate biosynthesis sensor protein KinB 42 158 6.5E-37 T 12-10-2018 IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 Gene3D G3DSA:3.30.450.20 247 366 3.5E-17 T 12-10-2018 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 594 1.1E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 Gene3D G3DSA:1.10.8.500 194 245 1.3E-6 T 12-10-2018 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 SUPERFAMILY SSF55874 432 595 2.75E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 SUPERFAMILY SSF55785 246 367 1.68E-13 T 12-10-2018 IPR035965 PAS domain superfamily PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 SMART SM00304 195 247 4.1E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 Gene3D G3DSA:1.20.120.880 39 168 1.7E-67 T 12-10-2018 IPR038320 KinB, N-terminal domain superfamily PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 SUPERFAMILY SSF158472 195 245 3.79E-8 T 12-10-2018 PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 373 9.9E-8 T 12-10-2018 IPR000014 PAS domain PA257_6885 d5c8866cb239094f98c6077dc1cd03c8 595 Pfam PF00672 HAMP domain 195 244 2.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4615 52822341fdf9d3f7c7022e9d2d847fb1 197 SUPERFAMILY SSF46565 137 192 1.44E-12 T 12-10-2018 IPR036869 Chaperone J-domain superfamily PA257_4615 52822341fdf9d3f7c7022e9d2d847fb1 197 Gene3D G3DSA:1.10.287.110 133 196 2.5E-11 T 12-10-2018 IPR036869 Chaperone J-domain superfamily PA257_4615 52822341fdf9d3f7c7022e9d2d847fb1 197 SMART SM00271 141 195 0.0048 T 12-10-2018 IPR001623 DnaJ domain PA257_4615 52822341fdf9d3f7c7022e9d2d847fb1 197 Pfam PF12339 DNA-J related protein 10 134 4.5E-43 T 12-10-2018 IPR021059 DnaJ-related protein, N-terminal PA257_6452 8ad7c39917fa7681aa9d312d462dfcf3 230 SUPERFAMILY SSF161098 13 208 1.96E-40 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6452 8ad7c39917fa7681aa9d312d462dfcf3 230 Gene3D G3DSA:1.10.3720.10 2 225 4.3E-51 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6452 8ad7c39917fa7681aa9d312d462dfcf3 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 223 3.6E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_6452 8ad7c39917fa7681aa9d312d462dfcf3 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 117 3.0E-22 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_2127 cf550eca212a9a46939d8316e36a0c7e 242 SUPERFAMILY SSF55781 62 241 2.09E-38 T 12-10-2018 PA257_2127 cf550eca212a9a46939d8316e36a0c7e 242 Pfam PF09339 IclR helix-turn-helix domain 8 55 2.3E-10 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_2127 cf550eca212a9a46939d8316e36a0c7e 242 SUPERFAMILY SSF46785 7 74 3.41E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2127 cf550eca212a9a46939d8316e36a0c7e 242 SMART SM00346 8 94 3.3E-7 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_2127 cf550eca212a9a46939d8316e36a0c7e 242 Gene3D G3DSA:1.10.10.10 5 74 5.2E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2127 cf550eca212a9a46939d8316e36a0c7e 242 Gene3D G3DSA:3.30.450.40 75 237 1.5E-44 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_2127 cf550eca212a9a46939d8316e36a0c7e 242 Pfam PF01614 Bacterial transcriptional regulator 128 238 6.3E-16 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal PA257_2431 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 SUPERFAMILY SSF46785 5 84 1.68E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2431 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Pfam PF03466 LysR substrate binding domain 89 291 2.5E-29 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2431 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2431 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2431 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2431 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 SUPERFAMILY SSF53850 91 292 2.17E-29 T 12-10-2018 PA257_2431 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Gene3D G3DSA:1.10.10.10 1 85 4.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2431 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Gene3D G3DSA:3.40.190.290 95 275 1.6E-17 T 12-10-2018 PA257_2431 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3925 c94b9267dc9fa948310468861dae90a5 330 SMART SM00829 15 327 1.5E-8 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_3925 c94b9267dc9fa948310468861dae90a5 330 Gene3D G3DSA:3.40.50.720 129 297 2.0E-118 T 12-10-2018 PA257_3925 c94b9267dc9fa948310468861dae90a5 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 9.3E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_3925 c94b9267dc9fa948310468861dae90a5 330 Gene3D G3DSA:3.90.180.10 20 327 2.0E-118 T 12-10-2018 PA257_3925 c94b9267dc9fa948310468861dae90a5 330 Pfam PF00107 Zinc-binding dehydrogenase 162 271 2.7E-12 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_3925 c94b9267dc9fa948310468861dae90a5 330 SUPERFAMILY SSF50129 8 147 2.59E-40 T 12-10-2018 IPR011032 GroES-like superfamily PA257_3925 c94b9267dc9fa948310468861dae90a5 330 SUPERFAMILY SSF51735 119 296 1.65E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3925 c94b9267dc9fa948310468861dae90a5 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 329 2.3E-138 T 12-10-2018 IPR014188 Acrylyl-CoA reductase AcuI PA257_1099 9c006b3aee557362e572ea0ca74db4b9 322 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 317 26.618 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 PA257_1099 9c006b3aee557362e572ea0ca74db4b9 322 Gene3D G3DSA:3.90.650.10 145 318 4.0E-44 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PA257_1099 9c006b3aee557362e572ea0ca74db4b9 322 SUPERFAMILY SSF55326 1 138 2.36E-34 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PA257_1099 9c006b3aee557362e572ea0ca74db4b9 322 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 297 3.3E-5 T 12-10-2018 IPR010918 PurM-like, C-terminal domain PA257_1099 9c006b3aee557362e572ea0ca74db4b9 322 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 3.2E-24 T 12-10-2018 IPR016188 PurM-like, N-terminal domain PA257_1099 9c006b3aee557362e572ea0ca74db4b9 322 SUPERFAMILY SSF56042 143 303 8.58E-34 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PA257_1099 9c006b3aee557362e572ea0ca74db4b9 322 PIRSF PIRSF005303 1 317 1.4E-76 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 PA257_1099 9c006b3aee557362e572ea0ca74db4b9 322 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 317 3.6E-93 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 PA257_1099 9c006b3aee557362e572ea0ca74db4b9 322 Gene3D G3DSA:3.30.1330.10 1 144 2.7E-48 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PA257_2215 2bc422c38812a3fa18fc1f39e18ee0d3 286 Gene3D G3DSA:1.20.1540.10 82 279 6.2E-46 T 12-10-2018 IPR035952 Rhomboid-like superfamily PA257_2215 2bc422c38812a3fa18fc1f39e18ee0d3 286 Pfam PF16733 Rhomboid N-terminal domain 2 68 2.7E-32 T 12-10-2018 IPR031976 Rhomboid protease, N-terminal PA257_2215 2bc422c38812a3fa18fc1f39e18ee0d3 286 Gene3D G3DSA:3.30.70.2080 1 56 9.3E-32 T 12-10-2018 IPR038244 Rhomboid protease, N-terminal domain superfamily PA257_2215 2bc422c38812a3fa18fc1f39e18ee0d3 286 SUPERFAMILY SSF144091 82 285 3.53E-35 T 12-10-2018 PA257_2215 2bc422c38812a3fa18fc1f39e18ee0d3 286 Pfam PF01694 Rhomboid family 136 277 2.5E-29 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PA257_3638 11e8403b93256486966480a2bf8d087d 169 Gene3D G3DSA:1.10.1740.10 3 77 1.3E-5 T 12-10-2018 PA257_3638 11e8403b93256486966480a2bf8d087d 169 SUPERFAMILY SSF88659 92 164 1.61E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_3638 11e8403b93256486966480a2bf8d087d 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 160 4.8E-21 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_3638 11e8403b93256486966480a2bf8d087d 169 Pfam PF04542 Sigma-70 region 2 15 80 2.2E-11 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3638 11e8403b93256486966480a2bf8d087d 169 SUPERFAMILY SSF88946 12 98 1.26E-10 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3638 11e8403b93256486966480a2bf8d087d 169 Gene3D G3DSA:1.10.10.10 91 164 1.1E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3638 11e8403b93256486966480a2bf8d087d 169 Pfam PF04545 Sigma-70, region 4 116 163 5.3E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PA257_6841 5071ce423fae0093a664acaabd2cab52 950 Gene3D G3DSA:2.10.70.100 346 394 1.6E-9 T 12-10-2018 PA257_6841 5071ce423fae0093a664acaabd2cab52 950 SUPERFAMILY SSF55785 391 511 4.54E-24 T 12-10-2018 IPR035965 PAS domain superfamily PA257_6841 5071ce423fae0093a664acaabd2cab52 950 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 398 5.4E-8 T 12-10-2018 IPR000014 PAS domain PA257_6841 5071ce423fae0093a664acaabd2cab52 950 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 397 521 6.5E-20 T 12-10-2018 IPR000014 PAS domain PA257_6841 5071ce423fae0093a664acaabd2cab52 950 Pfam PF13426 PAS domain 411 512 2.8E-16 T 12-10-2018 IPR000014 PAS domain PA257_6841 5071ce423fae0093a664acaabd2cab52 950 Pfam PF00563 EAL domain 703 936 9.4E-74 T 12-10-2018 IPR001633 EAL domain PA257_6841 5071ce423fae0093a664acaabd2cab52 950 Pfam PF08447 PAS fold 316 385 4.1E-17 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_6841 5071ce423fae0093a664acaabd2cab52 950 Gene3D G3DSA:3.20.20.450 700 948 4.1E-103 T 12-10-2018 IPR035919 EAL domain superfamily PA257_6841 5071ce423fae0093a664acaabd2cab52 950 SMART SM00052 696 941 9.4E-120 T 12-10-2018 IPR001633 EAL domain PA257_6841 5071ce423fae0093a664acaabd2cab52 950 Pfam PF00990 Diguanylate cyclase, GGDEF domain 526 681 1.3E-41 T 12-10-2018 IPR000160 GGDEF domain PA257_6841 5071ce423fae0093a664acaabd2cab52 950 SMART SM00086 472 514 0.0021 T 12-10-2018 IPR001610 PAC motif PA257_6841 5071ce423fae0093a664acaabd2cab52 950 SMART SM00086 349 392 1.0E-6 T 12-10-2018 IPR001610 PAC motif PA257_6841 5071ce423fae0093a664acaabd2cab52 950 Gene3D G3DSA:3.30.450.20 400 522 1.3E-30 T 12-10-2018 PA257_6841 5071ce423fae0093a664acaabd2cab52 950 SMART SM00091 277 342 46.0 T 12-10-2018 IPR000014 PAS domain PA257_6841 5071ce423fae0093a664acaabd2cab52 950 SMART SM00091 400 466 2.6E-8 T 12-10-2018 IPR000014 PAS domain PA257_6841 5071ce423fae0093a664acaabd2cab52 950 Gene3D G3DSA:3.30.70.270 523 699 9.1E-54 T 12-10-2018 PA257_6841 5071ce423fae0093a664acaabd2cab52 950 SUPERFAMILY SSF55073 530 688 1.1E-42 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_6841 5071ce423fae0093a664acaabd2cab52 950 SMART SM00267 514 686 5.0E-52 T 12-10-2018 IPR000160 GGDEF domain PA257_6841 5071ce423fae0093a664acaabd2cab52 950 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 526 684 9.9E-33 T 12-10-2018 IPR000160 GGDEF domain PA257_6841 5071ce423fae0093a664acaabd2cab52 950 SUPERFAMILY SSF141868 701 948 3.27E-92 T 12-10-2018 IPR035919 EAL domain superfamily PA257_6841 5071ce423fae0093a664acaabd2cab52 950 SUPERFAMILY SSF55785 319 394 2.79E-14 T 12-10-2018 IPR035965 PAS domain superfamily PA257_6841 5071ce423fae0093a664acaabd2cab52 950 Gene3D G3DSA:3.30.450.20 272 343 1.1E-11 T 12-10-2018 PA257_6796 fb0bbd4c8eb2ce9ad98d1164fc4a8421 257 Pfam PF01012 Electron transfer flavoprotein domain 27 185 1.3E-17 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PA257_6796 fb0bbd4c8eb2ce9ad98d1164fc4a8421 257 Gene3D G3DSA:3.40.50.620 5 257 1.3E-40 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_6796 fb0bbd4c8eb2ce9ad98d1164fc4a8421 257 SMART SM00893 12 190 1.0E-5 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PA257_6796 fb0bbd4c8eb2ce9ad98d1164fc4a8421 257 SUPERFAMILY SSF52402 24 217 1.19E-25 T 12-10-2018 PA257_2261 7ba43a4258322ec132cc6f409b12d447 402 Pfam PF00909 Ammonium Transporter Family 19 395 6.8E-86 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PA257_2261 7ba43a4258322ec132cc6f409b12d447 402 Gene3D G3DSA:1.10.3430.10 1 402 1.8E-94 T 12-10-2018 IPR029020 Ammonium/urea transporter PA257_2261 7ba43a4258322ec132cc6f409b12d447 402 SUPERFAMILY SSF111352 13 380 2.09E-91 T 12-10-2018 PA257_2261 7ba43a4258322ec132cc6f409b12d447 402 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 SMART SM00387 655 765 1.9E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 SUPERFAMILY SSF47384 539 610 8.24E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 Gene3D G3DSA:1.10.287.130 543 611 2.3E-6 T 12-10-2018 PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 Gene3D G3DSA:3.30.450.20 421 542 1.9E-7 T 12-10-2018 PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 PIRSF PIRSF037347 2 768 2.3E-190 T 12-10-2018 IPR017181 Signal transduction histidine kinase, CHASE2 sensor domain-containing, predicted PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 656 763 2.2E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 SUPERFAMILY SSF55874 605 764 4.71E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 Pfam PF08448 PAS fold 441 542 9.9E-7 T 12-10-2018 IPR013656 PAS fold-4 PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 SMART SM00091 435 502 5.4E-4 T 12-10-2018 IPR000014 PAS domain PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 Gene3D G3DSA:3.30.565.10 622 767 2.0E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 Pfam PF05226 CHASE2 domain 35 325 2.7E-54 T 12-10-2018 IPR007890 CHASE2 PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 749 762 4.5E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 725 743 4.5E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 706 4.5E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 SMART SM01080 43 328 9.3E-88 T 12-10-2018 IPR007890 CHASE2 PA257_1115 7d1d482c4fc828ca886c76780e91965e 768 SUPERFAMILY SSF55785 420 537 3.24E-7 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4358 895961702a9758eb6deb43605a753ada 385 Gene3D G3DSA:2.40.30.170 57 301 3.3E-79 T 12-10-2018 PA257_4358 895961702a9758eb6deb43605a753ada 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 370 1.1E-72 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_4358 895961702a9758eb6deb43605a753ada 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 291 1.3E-18 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_4358 895961702a9758eb6deb43605a753ada 385 Gene3D G3DSA:2.40.420.20 302 368 3.3E-79 T 12-10-2018 PA257_4358 895961702a9758eb6deb43605a753ada 385 SUPERFAMILY SSF111369 62 298 1.31E-52 T 12-10-2018 PA257_4358 895961702a9758eb6deb43605a753ada 385 Gene3D G3DSA:2.40.50.100 70 214 3.3E-79 T 12-10-2018 PA257_4358 895961702a9758eb6deb43605a753ada 385 Gene3D G3DSA:1.10.287.470 105 178 3.3E-79 T 12-10-2018 PA257_0182 f415c69555febf633db2d5733a5d776d 279 Gene3D G3DSA:3.30.450.40 100 279 1.1E-55 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_0182 f415c69555febf633db2d5733a5d776d 279 SUPERFAMILY SSF46785 34 105 4.76E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0182 f415c69555febf633db2d5733a5d776d 279 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 30 276 1.6E-101 T 12-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 PA257_0182 f415c69555febf633db2d5733a5d776d 279 SMART SM00346 33 121 3.0E-33 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_0182 f415c69555febf633db2d5733a5d776d 279 SUPERFAMILY SSF55781 98 277 4.56E-49 T 12-10-2018 PA257_0182 f415c69555febf633db2d5733a5d776d 279 Pfam PF01614 Bacterial transcriptional regulator 151 275 3.0E-37 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal PA257_0182 f415c69555febf633db2d5733a5d776d 279 Pfam PF09339 IclR helix-turn-helix domain 35 86 2.2E-14 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_0182 f415c69555febf633db2d5733a5d776d 279 Gene3D G3DSA:1.10.10.10 20 99 4.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0609 0c846cb9d6aca292a22c2ff46ff5dd92 285 SUPERFAMILY SSF81606 15 223 3.14E-7 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_0609 0c846cb9d6aca292a22c2ff46ff5dd92 285 Pfam PF13672 Protein phosphatase 2C 8 253 4.3E-42 T 12-10-2018 PA257_0609 0c846cb9d6aca292a22c2ff46ff5dd92 285 Gene3D G3DSA:3.60.40.10 9 262 4.8E-8 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_2473 2bb875b78dc301d9f9eb7ed101b80925 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 262 1.5E-37 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_2473 2bb875b78dc301d9f9eb7ed101b80925 263 Gene3D G3DSA:1.10.12.10 206 263 4.6E-16 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PA257_2473 2bb875b78dc301d9f9eb7ed101b80925 263 SUPERFAMILY SSF52096 9 263 1.78E-60 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_2473 2bb875b78dc301d9f9eb7ed101b80925 263 Gene3D G3DSA:3.90.226.10 6 205 7.6E-58 T 12-10-2018 PA257_2924 3bdad92dc65e294eb2ae020afe5975df 141 Gene3D G3DSA:3.40.630.30 3 140 1.5E-38 T 12-10-2018 PA257_2924 3bdad92dc65e294eb2ae020afe5975df 141 Pfam PF13673 Acetyltransferase (GNAT) domain 24 138 3.3E-23 T 12-10-2018 IPR000182 GNAT domain PA257_2924 3bdad92dc65e294eb2ae020afe5975df 141 SUPERFAMILY SSF55729 3 140 3.43E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_1292 2c26f2cfc5d8690160053118267388eb 513 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 5.6E-30 T 12-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 PA257_1292 2c26f2cfc5d8690160053118267388eb 513 Gene3D G3DSA:3.30.70.20 1 298 9.0E-104 T 12-10-2018 PA257_1292 2c26f2cfc5d8690160053118267388eb 513 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 490 0.0 T 12-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 PA257_1292 2c26f2cfc5d8690160053118267388eb 513 Pfam PF13247 4Fe-4S dicluster domain 175 271 8.0E-38 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_1292 2c26f2cfc5d8690160053118267388eb 513 Gene3D G3DSA:1.10.3650.10 358 434 1.7E-30 T 12-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 PA257_1292 2c26f2cfc5d8690160053118267388eb 513 SUPERFAMILY SSF54862 1 487 8.37E-178 T 12-10-2018 PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 SUPERFAMILY SSF58104 233 542 1.83E-61 T 12-10-2018 PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 SMART SM00283 273 541 2.4E-46 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 182 3.6E-20 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 SMART SM00304 213 265 1.4E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 505 4.8E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 Gene3D G3DSA:1.10.287.950 212 542 4.3E-64 T 12-10-2018 PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 Pfam PF00672 HAMP domain 213 261 1.2E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 17 1.8E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 1.8E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.8E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_1513 2f778cc0eb46c0546b38a56827904c98 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.8E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 SUPERFAMILY SSF118215 10 402 7.72E-123 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 Gene3D G3DSA:1.10.3860.10 1 418 2.2E-124 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 Pfam PF00375 Sodium:dicarboxylate symporter family 10 402 9.4E-114 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 296 319 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 3.2E-28 T 12-10-2018 PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 3.2E-28 T 12-10-2018 PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 3.2E-28 T 12-10-2018 PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 3.2E-28 T 12-10-2018 PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 3.2E-28 T 12-10-2018 PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 3.2E-28 T 12-10-2018 PA257_4623 163dd5826fdc1d5893ce2d934577ce4c 436 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 429 38.159 T 12-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 PA257_6142 39149155eb2ad295b167fc41981c682d 100 Pfam PF00547 Urease, gamma subunit 1 99 3.8E-47 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6142 39149155eb2ad295b167fc41981c682d 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 7.6E-52 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6142 39149155eb2ad295b167fc41981c682d 100 Gene3D G3DSA:3.30.280.10 4 100 1.8E-48 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6142 39149155eb2ad295b167fc41981c682d 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.858 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6142 39149155eb2ad295b167fc41981c682d 100 SUPERFAMILY SSF54111 1 99 2.75E-46 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6142 39149155eb2ad295b167fc41981c682d 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 2.0E-36 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6142 39149155eb2ad295b167fc41981c682d 100 PIRSF PIRSF001223 1 100 4.6E-50 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_2228 8a649dc9a0e39638d5c847038083ec23 586 Gene3D G3DSA:3.40.50.410 97 283 4.1E-26 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_2228 8a649dc9a0e39638d5c847038083ec23 586 Gene3D G3DSA:1.25.40.10 284 516 9.3E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2228 8a649dc9a0e39638d5c847038083ec23 586 SUPERFAMILY SSF53300 102 233 1.09E-12 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_2228 8a649dc9a0e39638d5c847038083ec23 586 Pfam PF13519 von Willebrand factor type A domain 107 205 1.6E-10 T 12-10-2018 IPR002035 von Willebrand factor, type A PA257_2228 8a649dc9a0e39638d5c847038083ec23 586 SMART SM00028 409 442 3.9E-7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_2228 8a649dc9a0e39638d5c847038083ec23 586 Pfam PF00515 Tetratricopeptide repeat 410 441 1.6E-8 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 PA257_2228 8a649dc9a0e39638d5c847038083ec23 586 SUPERFAMILY SSF48452 363 477 9.95E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6174 cdf0262d09b3b5c71ad69d7ac2fac656 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 168 4.2E-15 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_6174 cdf0262d09b3b5c71ad69d7ac2fac656 178 Pfam PF04542 Sigma-70 region 2 18 88 8.5E-6 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_6174 cdf0262d09b3b5c71ad69d7ac2fac656 178 Pfam PF08281 Sigma-70, region 4 119 170 4.4E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_6174 cdf0262d09b3b5c71ad69d7ac2fac656 178 SUPERFAMILY SSF88659 114 175 3.05E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_6174 cdf0262d09b3b5c71ad69d7ac2fac656 178 Gene3D G3DSA:1.10.10.10 99 176 1.2E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6174 cdf0262d09b3b5c71ad69d7ac2fac656 178 SUPERFAMILY SSF88946 8 108 4.71E-11 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_6174 cdf0262d09b3b5c71ad69d7ac2fac656 178 Gene3D G3DSA:1.10.1740.10 5 85 3.2E-7 T 12-10-2018 PA257_2337 7846f8267589d13e448b733d17914cf6 312 SUPERFAMILY SSF52151 5 299 7.67E-73 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PA257_2337 7846f8267589d13e448b733d17914cf6 312 SUPERFAMILY SSF55048 129 198 4.58E-17 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PA257_2337 7846f8267589d13e448b733d17914cf6 312 Pfam PF00698 Acyl transferase domain 7 276 1.7E-41 T 12-10-2018 IPR014043 Acyl transferase PA257_2337 7846f8267589d13e448b733d17914cf6 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 290 6.3E-111 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PA257_2337 7846f8267589d13e448b733d17914cf6 312 Gene3D G3DSA:3.40.366.10 7 285 2.5E-101 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 PA257_2337 7846f8267589d13e448b733d17914cf6 312 PIRSF PIRSF000446 2 311 2.2E-113 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PA257_2337 7846f8267589d13e448b733d17914cf6 312 Gene3D G3DSA:3.30.70.250 126 198 2.5E-101 T 12-10-2018 PA257_2337 7846f8267589d13e448b733d17914cf6 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 311 6.4E-35 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain PA257_2199 ec6d2dee918267b0a4c46d26ad47ae91 333 SUPERFAMILY SSF158544 108 214 1.7E-25 T 12-10-2018 IPR038072 GspK, central domain superfamily PA257_2199 ec6d2dee918267b0a4c46d26ad47ae91 333 Pfam PF03934 Type II secretion system (T2SS), protein K 30 307 8.2E-87 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PA257_2199 ec6d2dee918267b0a4c46d26ad47ae91 333 Gene3D G3DSA:1.10.40.60 106 215 1.0E-65 T 12-10-2018 IPR038072 GspK, central domain superfamily PA257_2199 ec6d2dee918267b0a4c46d26ad47ae91 333 SUPERFAMILY SSF47781 202 256 8.23E-6 T 12-10-2018 IPR010994 RuvA domain 2-like PA257_2199 ec6d2dee918267b0a4c46d26ad47ae91 333 PIRSF PIRSF002786 1 316 4.5E-76 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PA257_2199 ec6d2dee918267b0a4c46d26ad47ae91 333 Gene3D G3DSA:3.30.1300.30 42 300 1.0E-65 T 12-10-2018 PA257_2199 ec6d2dee918267b0a4c46d26ad47ae91 333 SUPERFAMILY SSF54523 38 314 2.04E-17 T 12-10-2018 PA257_2199 ec6d2dee918267b0a4c46d26ad47ae91 333 Gene3D G3DSA:1.10.40.60 216 275 1.0E-65 T 12-10-2018 IPR038072 GspK, central domain superfamily PA257_4043 b468b2c1fcbc35611fa137ba02087c79 317 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 314 3.1E-93 T 12-10-2018 IPR007296 Domain of unknown function DUF403 PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 SMART SM00304 189 242 7.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 5.0E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 5.0E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 SMART SM00387 352 463 1.8E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 SUPERFAMILY SSF55874 314 460 9.86E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 457 7.1E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 SMART SM00388 243 309 6.2E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 460 1.5E-174 T 12-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 SUPERFAMILY SSF47384 226 307 1.51E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 Gene3D G3DSA:1.10.287.130 193 310 7.9E-23 T 12-10-2018 PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 SUPERFAMILY SSF158472 191 239 3.92E-5 T 12-10-2018 PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 307 2.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 Gene3D G3DSA:3.30.565.10 314 463 1.5E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6164 588cd66cf52808e3ee782bad8537a7bb 463 Pfam PF00672 HAMP domain 189 238 5.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF01590 GAF domain 17 152 3.3E-15 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF47831 204 316 7.45E-30 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF51621 427 715 1.05E-102 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF52009 300 420 6.93E-29 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF55781 2 158 2.4E-32 T 12-10-2018 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 620 638 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:3.30.450.40 1 164 2.0E-50 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 179 736 1.1E-141 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 620 635 5.9E-24 T 12-10-2018 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 673 685 5.9E-24 T 12-10-2018 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 467 486 5.9E-24 T 12-10-2018 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 637 652 5.9E-24 T 12-10-2018 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:1.10.274.10 197 321 1.0E-63 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 SMART SM00065 17 164 4.5E-23 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF05524 PEP-utilising enzyme, N-terminal 180 301 2.7E-27 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 426 713 1.9E-98 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:3.20.20.60 408 745 3.6E-109 T 12-10-2018 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:3.50.30.10 180 407 1.0E-63 T 12-10-2018 PA257_0409 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF00391 PEP-utilising enzyme, mobile domain 327 399 2.8E-16 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PA257_2232 404149dfdaef148fa0461012b1e48e37 326 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 44 174 8.0E-64 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PA257_2232 404149dfdaef148fa0461012b1e48e37 326 Gene3D G3DSA:1.10.8.300 207 323 6.8E-37 T 12-10-2018 PA257_2232 404149dfdaef148fa0461012b1e48e37 326 PIRSF PIRSF002849 1 326 2.9E-128 T 12-10-2018 PA257_2232 404149dfdaef148fa0461012b1e48e37 326 SUPERFAMILY SSF52540 10 298 2.78E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2232 404149dfdaef148fa0461012b1e48e37 326 Gene3D G3DSA:3.40.50.300 25 191 7.2E-45 T 12-10-2018 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 897 344.921 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 SUPERFAMILY SSF55021 813 879 6.66E-11 T 12-10-2018 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 SUPERFAMILY SSF109604 426 591 1.07E-13 T 12-10-2018 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 Gene3D G3DSA:3.30.460.10 54 170 3.9E-5 T 12-10-2018 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 SUPERFAMILY SSF81593 205 314 1.41E-12 T 12-10-2018 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 Pfam PF01909 Nucleotidyltransferase domain 72 114 1.0E-7 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 Pfam PF01966 HD domain 463 569 2.1E-10 T 12-10-2018 IPR006674 HD domain PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 PIRSF PIRSF006288 12 892 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 Gene3D G3DSA:1.10.3210.10 446 590 2.7E-7 T 12-10-2018 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 Pfam PF01842 ACT domain 816 873 1.6E-7 T 12-10-2018 IPR002912 ACT domain PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 Pfam PF08335 GlnD PII-uridylyltransferase 185 323 5.3E-37 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 Gene3D G3DSA:3.30.70.260 811 893 1.1E-5 T 12-10-2018 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 SUPERFAMILY SSF81301 8 181 2.67E-24 T 12-10-2018 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 SMART SM00471 457 604 1.7E-9 T 12-10-2018 IPR003607 HD/PDEase domain PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 Gene3D G3DSA:1.20.120.330 186 325 1.6E-5 T 12-10-2018 PA257_1563 443f788141bbded938f4fdc2a2d5ecec 900 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 36 885 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PA257_0665 8abb27d7832510305658e76238c9aa5f 465 Gene3D G3DSA:1.20.210.10 1 465 9.0E-136 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0665 8abb27d7832510305658e76238c9aa5f 465 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 203 259 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0665 8abb27d7832510305658e76238c9aa5f 465 SUPERFAMILY SSF81442 12 458 2.75E-89 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0665 8abb27d7832510305658e76238c9aa5f 465 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 5.4E-83 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0106 af55f09929ed2e94d1582a23ac294bfb 162 SUPERFAMILY SSF141452 2 160 2.88E-58 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_0106 af55f09929ed2e94d1582a23ac294bfb 162 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 1.2E-43 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_0106 af55f09929ed2e94d1582a23ac294bfb 162 Gene3D G3DSA:2.30.110.20 1 162 1.6E-74 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_0106 af55f09929ed2e94d1582a23ac294bfb 162 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 13 144 9.0E-17 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_5432 bea7401e252f6b02d578cdf6e60edaa0 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 409 6.2E-29 T 12-10-2018 IPR000160 GGDEF domain PA257_5432 bea7401e252f6b02d578cdf6e60edaa0 687 SUPERFAMILY SSF141868 426 676 4.71E-93 T 12-10-2018 IPR035919 EAL domain superfamily PA257_5432 bea7401e252f6b02d578cdf6e60edaa0 687 Gene3D G3DSA:3.20.20.450 423 676 7.6E-103 T 12-10-2018 IPR035919 EAL domain superfamily PA257_5432 bea7401e252f6b02d578cdf6e60edaa0 687 SMART SM00267 239 411 1.1E-43 T 12-10-2018 IPR000160 GGDEF domain PA257_5432 bea7401e252f6b02d578cdf6e60edaa0 687 SMART SM00052 421 667 2.8E-122 T 12-10-2018 IPR001633 EAL domain PA257_5432 bea7401e252f6b02d578cdf6e60edaa0 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 407 4.0E-38 T 12-10-2018 IPR000160 GGDEF domain PA257_5432 bea7401e252f6b02d578cdf6e60edaa0 687 SUPERFAMILY SSF55073 255 411 2.2E-38 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_5432 bea7401e252f6b02d578cdf6e60edaa0 687 Gene3D G3DSA:3.30.70.270 252 422 5.0E-46 T 12-10-2018 PA257_5432 bea7401e252f6b02d578cdf6e60edaa0 687 Pfam PF00563 EAL domain 427 662 2.7E-75 T 12-10-2018 IPR001633 EAL domain PA257_6222 f0518cf69d147f63c2dd1eb12488d6be 394 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 15 324 3.6E-90 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 PA257_6222 f0518cf69d147f63c2dd1eb12488d6be 394 Gene3D G3DSA:3.30.930.10 5 333 5.4E-75 T 12-10-2018 PA257_6222 f0518cf69d147f63c2dd1eb12488d6be 394 PIRSF PIRSF001549 7 388 7.2E-48 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 PA257_6222 f0518cf69d147f63c2dd1eb12488d6be 394 SUPERFAMILY SSF55681 7 324 2.99E-60 T 12-10-2018 PA257_6222 f0518cf69d147f63c2dd1eb12488d6be 394 Pfam PF13393 Histidyl-tRNA synthetase 12 321 5.2E-118 T 12-10-2018 PA257_6222 f0518cf69d147f63c2dd1eb12488d6be 394 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 373 34.898 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 PA257_5136 044a3c8b57a6c1120c90c1a535d8f9f8 248 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 242 1.4E-96 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PA257_5136 044a3c8b57a6c1120c90c1a535d8f9f8 248 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 9 241 8.9E-102 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PA257_5136 044a3c8b57a6c1120c90c1a535d8f9f8 248 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 248 127.619 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PA257_5136 044a3c8b57a6c1120c90c1a535d8f9f8 248 Gene3D G3DSA:3.20.20.70 1 248 1.5E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_5136 044a3c8b57a6c1120c90c1a535d8f9f8 248 SUPERFAMILY SSF63892 7 242 6.15E-97 T 12-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 SUPERFAMILY SSF52016 161 372 3.57E-70 T 12-10-2018 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.9E-96 T 12-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.30.499.10 405 532 8.0E-150 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.9E-67 T 12-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 SUPERFAMILY SSF53732 379 858 4.71E-148 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.20.19.10 162 361 8.5E-77 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.30.499.10 686 867 5.0E-66 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 857 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:1.25.40.310 1 161 8.5E-72 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 Pfam PF00330 Aconitase family (aconitate hydratase) 475 821 2.5E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.40.1060.10 385 684 8.0E-150 T 12-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 SUPERFAMILY SSF74778 2 160 1.06E-68 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PA257_3983 c0640becf0762a86a9a01a5bfcc8ce06 869 PIRSF PIRSF036687 1 862 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 PA257_3076 62538ef0ba15e8c31b6fd662b0acdd78 292 Gene3D G3DSA:3.40.190.10 160 256 1.2E-44 T 12-10-2018 PA257_3076 62538ef0ba15e8c31b6fd662b0acdd78 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.5E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3076 62538ef0ba15e8c31b6fd662b0acdd78 292 SUPERFAMILY SSF46785 1 110 3.32E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3076 62538ef0ba15e8c31b6fd662b0acdd78 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3076 62538ef0ba15e8c31b6fd662b0acdd78 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3076 62538ef0ba15e8c31b6fd662b0acdd78 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3076 62538ef0ba15e8c31b6fd662b0acdd78 292 Pfam PF03466 LysR substrate binding domain 88 281 3.8E-30 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3076 62538ef0ba15e8c31b6fd662b0acdd78 292 Gene3D G3DSA:1.10.10.10 1 84 7.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3076 62538ef0ba15e8c31b6fd662b0acdd78 292 Gene3D G3DSA:3.40.190.10 94 262 1.2E-44 T 12-10-2018 PA257_3076 62538ef0ba15e8c31b6fd662b0acdd78 292 SUPERFAMILY SSF53850 90 283 1.99E-28 T 12-10-2018 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 5.2E-40 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 1.0E-71 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 SUPERFAMILY SSF50621 228 355 1.43E-43 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 SMART SM01005 232 355 2.6E-64 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 Gene3D G3DSA:3.20.20.10 10 216 5.1E-140 T 12-10-2018 IPR029066 PLP-binding barrel PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 Hamap MF_01201 Alanine racemase. 1 355 35.142 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 PRINTS PR00992 Alanine racemase signature 265 280 2.2E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 PRINTS PR00992 Alanine racemase signature 338 351 2.2E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 PRINTS PR00992 Alanine racemase signature 120 132 2.2E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 PRINTS PR00992 Alanine racemase signature 248 263 2.2E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 PRINTS PR00992 Alanine racemase signature 154 165 2.2E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 PRINTS PR00992 Alanine racemase signature 191 218 2.2E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 PRINTS PR00992 Alanine racemase signature 60 78 2.2E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 PRINTS PR00992 Alanine racemase signature 286 303 2.2E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 PRINTS PR00992 Alanine racemase signature 25 41 2.2E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 Gene3D G3DSA:2.40.37.10 8 353 5.1E-140 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 SUPERFAMILY SSF51419 8 233 2.09E-73 T 12-10-2018 IPR029066 PLP-binding barrel PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6685 84e1dfe148ff1b1b319c57ad819ec722 357 TIGRFAM TIGR00492 alr: alanine racemase 3 354 4.4E-108 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_0837 1abdc8ac78f93a40876dd9f39119154b 92 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 92 20.138 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0837 1abdc8ac78f93a40876dd9f39119154b 92 ProSitePatterns PS00464 Ribosomal protein L22 signature. 65 89 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0837 1abdc8ac78f93a40876dd9f39119154b 92 SUPERFAMILY SSF54843 1 91 1.83E-36 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 PA257_0837 1abdc8ac78f93a40876dd9f39119154b 92 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 1 89 2.2E-39 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0837 1abdc8ac78f93a40876dd9f39119154b 92 Pfam PF00237 Ribosomal protein L22p/L17e 2 89 4.1E-33 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PA257_0837 1abdc8ac78f93a40876dd9f39119154b 92 Gene3D G3DSA:3.90.470.10 1 92 3.1E-39 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 PA257_2662 bfa4f84708627c67d646502368d49664 310 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2662 bfa4f84708627c67d646502368d49664 310 Pfam PF00005 ABC transporter 21 165 8.4E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_2662 bfa4f84708627c67d646502368d49664 310 Gene3D G3DSA:3.40.50.300 1 237 1.0E-64 T 12-10-2018 PA257_2662 bfa4f84708627c67d646502368d49664 310 SMART SM00382 30 213 4.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2662 bfa4f84708627c67d646502368d49664 310 SUPERFAMILY SSF52540 4 234 8.88E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6531 8729913d8da09c134361c52dcebd9d32 279 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 261 1.8E-47 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 PA257_6531 8729913d8da09c134361c52dcebd9d32 279 Gene3D G3DSA:3.40.140.10 131 278 1.1E-38 T 12-10-2018 PA257_6531 8729913d8da09c134361c52dcebd9d32 279 SUPERFAMILY SSF53927 36 273 1.74E-66 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PA257_6531 8729913d8da09c134361c52dcebd9d32 279 Gene3D G3DSA:3.10.20.10 42 128 3.1E-9 T 12-10-2018 PA257_6531 8729913d8da09c134361c52dcebd9d32 279 PIRSF PIRSF015626 9 279 1.2E-72 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 PA257_6531 8729913d8da09c134361c52dcebd9d32 279 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 17 278 27.551 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 PA257_6531 8729913d8da09c134361c52dcebd9d32 279 Pfam PF02634 FdhD/NarQ family 41 273 6.0E-66 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 PA257_5054 7cee0d3e9d153e9723dc6dc2df2f7c05 465 Pfam PF00772 DnaB-like helicase N terminal domain 5 108 1.4E-16 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PA257_5054 7cee0d3e9d153e9723dc6dc2df2f7c05 465 SUPERFAMILY SSF52540 184 424 1.28E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5054 7cee0d3e9d153e9723dc6dc2df2f7c05 465 SMART SM00382 198 397 5.2E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5054 7cee0d3e9d153e9723dc6dc2df2f7c05 465 Gene3D G3DSA:1.10.860.10 4 160 1.9E-25 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PA257_5054 7cee0d3e9d153e9723dc6dc2df2f7c05 465 Gene3D G3DSA:3.40.50.300 161 437 6.2E-76 T 12-10-2018 PA257_5054 7cee0d3e9d153e9723dc6dc2df2f7c05 465 Pfam PF03796 DnaB-like helicase C terminal domain 184 434 2.5E-68 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 PA257_5054 7cee0d3e9d153e9723dc6dc2df2f7c05 465 SUPERFAMILY SSF48024 4 116 5.23E-19 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 PA257_0898 37c848d53aa46a110cb1f9d4f942b7e8 540 Gene3D G3DSA:3.40.50.12780 6 438 1.0E-112 T 12-10-2018 PA257_0898 37c848d53aa46a110cb1f9d4f942b7e8 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 527 4.8E-21 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_0898 37c848d53aa46a110cb1f9d4f942b7e8 540 SUPERFAMILY SSF56801 13 538 2.09E-142 T 12-10-2018 PA257_0898 37c848d53aa46a110cb1f9d4f942b7e8 540 Pfam PF00501 AMP-binding enzyme 25 443 1.9E-94 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_0898 37c848d53aa46a110cb1f9d4f942b7e8 540 Gene3D G3DSA:3.30.300.310 439 539 1.1E-33 T 12-10-2018 PA257_4820 eb7516fd430917af8dd34d6d2b2e97d5 83 SUPERFAMILY SSF64307 6 82 1.07E-22 T 12-10-2018 IPR036868 TusA-like domain superfamily PA257_4820 eb7516fd430917af8dd34d6d2b2e97d5 83 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 15 39 - T 12-10-2018 IPR001455 TusA-like domain PA257_4820 eb7516fd430917af8dd34d6d2b2e97d5 83 Pfam PF01206 Sulfurtransferase TusA 14 82 1.1E-21 T 12-10-2018 IPR001455 TusA-like domain PA257_4820 eb7516fd430917af8dd34d6d2b2e97d5 83 Gene3D G3DSA:3.30.110.40 5 83 5.2E-26 T 12-10-2018 IPR036868 TusA-like domain superfamily PA257_5109 9118ca874e0d3f6b4ad49f812455bcfa 240 Gene3D G3DSA:1.20.120.530 84 231 2.9E-34 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_5109 9118ca874e0d3f6b4ad49f812455bcfa 240 SUPERFAMILY SSF46785 13 108 8.81E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5109 9118ca874e0d3f6b4ad49f812455bcfa 240 SMART SM00895 90 217 2.3E-26 T 12-10-2018 IPR011711 GntR, C-terminal PA257_5109 9118ca874e0d3f6b4ad49f812455bcfa 240 SUPERFAMILY SSF48008 87 224 1.2E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_5109 9118ca874e0d3f6b4ad49f812455bcfa 240 Gene3D G3DSA:1.10.10.10 14 81 2.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5109 9118ca874e0d3f6b4ad49f812455bcfa 240 Pfam PF07729 FCD domain 90 216 7.0E-30 T 12-10-2018 IPR011711 GntR, C-terminal PA257_5109 9118ca874e0d3f6b4ad49f812455bcfa 240 SMART SM00345 22 80 1.7E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_5109 9118ca874e0d3f6b4ad49f812455bcfa 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 8.8E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00086 702 744 0.012 T 12-10-2018 IPR001610 PAC motif PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00086 418 460 0.0089 T 12-10-2018 IPR001610 PAC motif PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00086 572 614 5.3E-6 T 12-10-2018 IPR001610 PAC motif PA257_1040 270054ec6f52f38627b30ce659df380f 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 970 3.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 935 945 3.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 917 931 3.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 976 989 3.4E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SUPERFAMILY SSF55785 344 450 1.31E-21 T 12-10-2018 IPR035965 PAS domain superfamily PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Pfam PF08447 PAS fold 649 738 6.2E-17 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Gene3D G3DSA:3.30.450.20 492 616 4.8E-26 T 12-10-2018 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SUPERFAMILY SSF55874 818 988 1.7E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM01079 77 267 1.2E-60 T 12-10-2018 IPR006189 CHASE domain PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Pfam PF00989 PAS fold 346 457 7.4E-15 T 12-10-2018 IPR013767 PAS fold GO:0006355 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Gene3D G3DSA:3.30.565.10 828 996 3.6E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SUPERFAMILY SSF47384 748 830 2.55E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Pfam PF03924 CHASE domain 80 263 1.3E-44 T 12-10-2018 IPR006189 CHASE domain PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Gene3D G3DSA:1.20.120.160 1300 1406 4.0E-14 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Gene3D G3DSA:3.30.450.350 81 280 3.9E-20 T 12-10-2018 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Gene3D G3DSA:3.40.50.2300 1148 1276 9.9E-36 T 12-10-2018 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Gene3D G3DSA:3.40.50.2300 1006 1142 1.5E-25 T 12-10-2018 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SUPERFAMILY SSF52172 1007 1135 1.71E-27 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Pfam PF00072 Response regulator receiver domain 1161 1270 1.9E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Pfam PF00072 Response regulator receiver domain 1012 1129 1.2E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 500 620 1.2E-15 T 12-10-2018 IPR000014 PAS domain PA257_1040 270054ec6f52f38627b30ce659df380f 1417 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 343 466 1.7E-24 T 12-10-2018 IPR000014 PAS domain PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Pfam PF00512 His Kinase A (phospho-acceptor) domain 764 829 1.5E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Gene3D G3DSA:2.10.70.100 699 743 1.6E-11 T 12-10-2018 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 876 991 3.6E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00448 1158 1273 6.5E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00448 1009 1130 1.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00388 764 829 2.1E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00387 876 992 1.6E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SUPERFAMILY SSF47226 1256 1378 7.59E-17 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00073 1306 1408 4.1E-5 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Pfam PF13426 PAS domain 502 613 6.0E-12 T 12-10-2018 IPR000014 PAS domain PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SUPERFAMILY SSF55785 504 621 6.63E-19 T 12-10-2018 IPR035965 PAS domain superfamily PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00091 626 696 0.0018 T 12-10-2018 IPR000014 PAS domain PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00091 491 559 6.2E-5 T 12-10-2018 IPR000014 PAS domain PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SMART SM00091 345 411 3.0E-8 T 12-10-2018 IPR000014 PAS domain PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Gene3D G3DSA:3.30.450.20 622 697 2.8E-16 T 12-10-2018 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Pfam PF01627 Hpt domain 1315 1397 2.9E-14 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Gene3D G3DSA:3.30.450.20 333 487 4.4E-26 T 12-10-2018 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 Gene3D G3DSA:1.10.287.130 744 827 2.5E-27 T 12-10-2018 PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SUPERFAMILY SSF55785 611 742 5.41E-19 T 12-10-2018 IPR035965 PAS domain superfamily PA257_1040 270054ec6f52f38627b30ce659df380f 1417 SUPERFAMILY SSF52172 1155 1279 4.13E-35 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4807 77da69e3650f496bd9f905136b969d61 715 SUPERFAMILY SSF56059 494 710 4.6E-39 T 12-10-2018 PA257_4807 77da69e3650f496bd9f905136b969d61 715 SUPERFAMILY SSF52210 315 469 3.27E-21 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_4807 77da69e3650f496bd9f905136b969d61 715 Pfam PF13380 CoA binding domain 25 148 5.5E-24 T 12-10-2018 IPR003781 CoA-binding GO:0048037 PA257_4807 77da69e3650f496bd9f905136b969d61 715 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 171 308 7.3E-41 T 12-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain PA257_4807 77da69e3650f496bd9f905136b969d61 715 Gene3D G3DSA:3.40.50.261 314 475 2.5E-23 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_4807 77da69e3650f496bd9f905136b969d61 715 Gene3D G3DSA:3.30.470.20 494 703 1.8E-73 T 12-10-2018 PA257_4807 77da69e3650f496bd9f905136b969d61 715 Gene3D G3DSA:3.40.50.261 147 311 1.0E-41 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_4807 77da69e3650f496bd9f905136b969d61 715 SUPERFAMILY SSF52210 148 309 6.8E-37 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_4807 77da69e3650f496bd9f905136b969d61 715 Gene3D G3DSA:3.40.50.720 16 145 1.2E-41 T 12-10-2018 PA257_4807 77da69e3650f496bd9f905136b969d61 715 SMART SM00881 21 116 6.5E-36 T 12-10-2018 IPR003781 CoA-binding GO:0048037 PA257_4807 77da69e3650f496bd9f905136b969d61 715 Pfam PF13549 ATP-grasp domain 493 706 2.0E-61 T 12-10-2018 PA257_4807 77da69e3650f496bd9f905136b969d61 715 SUPERFAMILY SSF51735 19 145 4.93E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4807 77da69e3650f496bd9f905136b969d61 715 Gene3D G3DSA:3.30.1490.20 510 587 1.8E-73 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_5307 0f3df0d6d963c8977dbbeab7b339fa3b 248 Gene3D G3DSA:3.30.1150.10 148 239 4.5E-8 T 12-10-2018 PA257_5307 0f3df0d6d963c8977dbbeab7b339fa3b 248 Pfam PF13103 TonB C terminal 163 230 2.1E-6 T 12-10-2018 PA257_5307 0f3df0d6d963c8977dbbeab7b339fa3b 248 SUPERFAMILY SSF74653 71 239 7.19E-15 T 12-10-2018 PA257_5307 0f3df0d6d963c8977dbbeab7b339fa3b 248 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 189 238 4.2E-7 T 12-10-2018 IPR006260 TonB/TolA, C-terminal PA257_4977 1e65fd892dab658313782380cd417f2d 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PA257_4977 1e65fd892dab658313782380cd417f2d 399 SUPERFAMILY SSF53383 1 397 2.48E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_4977 1e65fd892dab658313782380cd417f2d 399 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.4E-34 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PA257_4977 1e65fd892dab658313782380cd417f2d 399 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.4E-34 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PA257_4977 1e65fd892dab658313782380cd417f2d 399 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.4E-34 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PA257_4977 1e65fd892dab658313782380cd417f2d 399 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.4E-34 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PA257_4977 1e65fd892dab658313782380cd417f2d 399 Gene3D G3DSA:3.90.1150.10 7 393 1.6E-147 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_4977 1e65fd892dab658313782380cd417f2d 399 Pfam PF00155 Aminotransferase class I and II 29 393 1.5E-80 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_4977 1e65fd892dab658313782380cd417f2d 399 Gene3D G3DSA:3.40.640.10 62 301 1.6E-147 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_1821 59c44b6dc0aabe33fbb0d56cdd1714ad 212 PIRSF PIRSF000239 1 209 1.2E-78 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_1821 59c44b6dc0aabe33fbb0d56cdd1714ad 212 Gene3D G3DSA:3.40.30.10 1 145 2.9E-50 T 12-10-2018 PA257_1821 59c44b6dc0aabe33fbb0d56cdd1714ad 212 SUPERFAMILY SSF52833 3 209 4.17E-69 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_1821 59c44b6dc0aabe33fbb0d56cdd1714ad 212 Pfam PF00578 AhpC/TSA family 6 135 5.4E-31 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_1821 59c44b6dc0aabe33fbb0d56cdd1714ad 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 191 7.5E-12 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_1821 59c44b6dc0aabe33fbb0d56cdd1714ad 212 Gene3D G3DSA:3.30.1020.10 146 210 1.5E-27 T 12-10-2018 PA257_5545 191ae1f88d11e97d6dab3eff5e629468 485 Pfam PF00575 S1 RNA binding domain 38 100 6.1E-8 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_5545 191ae1f88d11e97d6dab3eff5e629468 485 Gene3D G3DSA:3.40.1260.20 398 484 4.7E-5 T 12-10-2018 PA257_5545 191ae1f88d11e97d6dab3eff5e629468 485 Pfam PF10150 Ribonuclease E/G family 115 389 5.5E-106 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PA257_5545 191ae1f88d11e97d6dab3eff5e629468 485 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 422 3.4E-160 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PA257_5545 191ae1f88d11e97d6dab3eff5e629468 485 Gene3D G3DSA:2.40.50.140 31 118 8.7E-29 T 12-10-2018 PA257_5545 191ae1f88d11e97d6dab3eff5e629468 485 SUPERFAMILY SSF50249 39 118 1.94E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_5545 191ae1f88d11e97d6dab3eff5e629468 485 SMART SM00316 37 113 3.5E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_0077 2435c7dc698a3dc0dc44a0dfc7155565 234 SUPERFAMILY SSF52833 4 210 1.95E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_0077 2435c7dc698a3dc0dc44a0dfc7155565 234 Pfam PF01323 DSBA-like thioredoxin domain 10 187 1.6E-6 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 PA257_0077 2435c7dc698a3dc0dc44a0dfc7155565 234 Gene3D G3DSA:3.40.30.10 1 213 1.6E-61 T 12-10-2018 PA257_1429 4b101b94a8a91a3da9edcb172f7697d0 637 Gene3D G3DSA:2.40.170.20 97 636 1.8E-170 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_1429 4b101b94a8a91a3da9edcb172f7697d0 637 Pfam PF00593 TonB dependent receptor 186 635 7.8E-49 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_1429 4b101b94a8a91a3da9edcb172f7697d0 637 Gene3D G3DSA:2.170.130.10 1 96 8.5E-31 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_1429 4b101b94a8a91a3da9edcb172f7697d0 637 SUPERFAMILY SSF56935 1 636 4.88E-111 T 12-10-2018 PA257_1429 4b101b94a8a91a3da9edcb172f7697d0 637 Pfam PF07715 TonB-dependent Receptor Plug Domain 1 84 9.8E-7 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_1429 4b101b94a8a91a3da9edcb172f7697d0 637 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 1 636 3.1E-103 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_3709 4d5ed9a85f999996027eb74759cafded 157 SUPERFAMILY SSF54909 65 154 4.11E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_3709 4d5ed9a85f999996027eb74759cafded 157 SMART SM00344 5 114 1.9E-38 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PA257_3709 4d5ed9a85f999996027eb74759cafded 157 SUPERFAMILY SSF46785 4 93 3.23E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3709 4d5ed9a85f999996027eb74759cafded 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 5.5E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_3709 4d5ed9a85f999996027eb74759cafded 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 5.5E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_3709 4d5ed9a85f999996027eb74759cafded 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 5.5E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_3709 4d5ed9a85f999996027eb74759cafded 157 Gene3D G3DSA:1.10.10.10 6 57 1.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3709 4d5ed9a85f999996027eb74759cafded 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PA257_3709 4d5ed9a85f999996027eb74759cafded 157 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 5.2E-21 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PA257_3709 4d5ed9a85f999996027eb74759cafded 157 Gene3D G3DSA:3.30.70.920 58 142 7.6E-25 T 12-10-2018 PA257_3709 4d5ed9a85f999996027eb74759cafded 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 52 7.2E-18 T 12-10-2018 PA257_0704 45c8dbbb16092151000b4015e53f4ada 231 Gene3D G3DSA:1.10.150.240 20 85 1.1E-54 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PA257_0704 45c8dbbb16092151000b4015e53f4ada 231 Gene3D G3DSA:3.40.50.1000 9 203 1.1E-54 T 12-10-2018 IPR023214 HAD superfamily PA257_0704 45c8dbbb16092151000b4015e53f4ada 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 183 5.7E-23 T 12-10-2018 PA257_0704 45c8dbbb16092151000b4015e53f4ada 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 183 7.3E-17 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0704 45c8dbbb16092151000b4015e53f4ada 231 SUPERFAMILY SSF56784 4 219 1.5E-51 T 12-10-2018 IPR036412 HAD-like superfamily PA257_0704 45c8dbbb16092151000b4015e53f4ada 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 3.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0704 45c8dbbb16092151000b4015e53f4ada 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 3.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0704 45c8dbbb16092151000b4015e53f4ada 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 3.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0704 45c8dbbb16092151000b4015e53f4ada 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 Pfam PF03496 ADP-ribosyltransferase exoenzyme 246 432 3.8E-31 T 12-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 Pfam PF03545 Yersinia virulence determinant (YopE) 132 201 4.4E-34 T 12-10-2018 IPR014773 Virulence factor YopE, GAP domain PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 SUPERFAMILY SSF47233 100 231 6.41E-52 T 12-10-2018 IPR037168 Virulence factor YopE, GAP domain superfamily PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 Gene3D G3DSA:3.90.176.10 241 410 2.1E-23 T 12-10-2018 PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 Gene3D G3DSA:1.20.120.260 114 240 3.0E-47 T 12-10-2018 IPR037168 Virulence factor YopE, GAP domain superfamily PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 SUPERFAMILY SSF56399 230 427 2.22E-33 T 12-10-2018 PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 39 56 1.0E-27 T 12-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 23 36 1.0E-27 T 12-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 215 232 1.0E-27 T 12-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 181 199 1.0E-27 T 12-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 PA257_0063 9c3e9c529be7c480c6a67250786b8bf1 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 132 149 1.0E-27 T 12-10-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 PA257_3517 120d8715b48ab4ec68149e1ce4f6eb3f 337 SUPERFAMILY SSF53659 7 334 5.61E-91 T 12-10-2018 PA257_3517 120d8715b48ab4ec68149e1ce4f6eb3f 337 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 38 329 8.7E-82 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 PA257_3517 120d8715b48ab4ec68149e1ce4f6eb3f 337 Gene3D G3DSA:3.40.718.10 1 336 3.3E-104 T 12-10-2018 PA257_0563 06ca28c3693c98048920910b0f18fa9d 485 Pfam PF02321 Outer membrane efflux protein 284 464 4.2E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_0563 06ca28c3693c98048920910b0f18fa9d 485 Pfam PF02321 Outer membrane efflux protein 66 256 7.8E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_0563 06ca28c3693c98048920910b0f18fa9d 485 SUPERFAMILY SSF56954 1 468 1.26E-120 T 12-10-2018 PA257_0563 06ca28c3693c98048920910b0f18fa9d 485 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 466 7.5E-173 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_0563 06ca28c3693c98048920910b0f18fa9d 485 Gene3D G3DSA:1.20.1600.10 57 466 2.2E-166 T 12-10-2018 PA257_0563 06ca28c3693c98048920910b0f18fa9d 485 Gene3D G3DSA:2.20.200.10 103 355 2.2E-166 T 12-10-2018 PA257_6396 a170810abb56561f1c869bcc18108523 250 SUPERFAMILY SSF46785 20 89 2.04E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6396 a170810abb56561f1c869bcc18108523 250 Pfam PF07702 UTRA domain 106 243 1.9E-36 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_6396 a170810abb56561f1c869bcc18108523 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 9.5E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6396 a170810abb56561f1c869bcc18108523 250 Gene3D G3DSA:1.10.10.10 18 86 5.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6396 a170810abb56561f1c869bcc18108523 250 SMART SM00345 26 85 1.1E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6396 a170810abb56561f1c869bcc18108523 250 SMART SM00866 106 243 2.8E-36 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_6396 a170810abb56561f1c869bcc18108523 250 Gene3D G3DSA:3.40.1410.10 104 239 3.9E-37 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_6396 a170810abb56561f1c869bcc18108523 250 SUPERFAMILY SSF64288 73 248 2.2E-45 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_6396 a170810abb56561f1c869bcc18108523 250 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 21 249 1.6E-108 T 12-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 PA257_6396 a170810abb56561f1c869bcc18108523 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 1.0E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6396 a170810abb56561f1c869bcc18108523 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 1.0E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4478 9db42d394cf820ff967f97c19aa20c8e 331 SUPERFAMILY SSF49503 119 278 2.43E-49 T 12-10-2018 IPR008972 Cupredoxin PA257_4478 9db42d394cf820ff967f97c19aa20c8e 331 Gene3D G3DSA:2.60.40.420 112 279 1.1E-54 T 12-10-2018 IPR008972 Cupredoxin PA257_4478 9db42d394cf820ff967f97c19aa20c8e 331 PIRSF PIRSF000292 1 310 2.8E-137 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 PA257_4478 9db42d394cf820ff967f97c19aa20c8e 331 SUPERFAMILY SSF81464 26 116 3.43E-23 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4478 9db42d394cf820ff967f97c19aa20c8e 331 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 217 4.9E-7 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4478 9db42d394cf820ff967f97c19aa20c8e 331 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 15 237 3.3E-117 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 PA257_4478 9db42d394cf820ff967f97c19aa20c8e 331 Pfam PF06481 COX Aromatic Rich Motif 237 282 2.2E-15 T 12-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 PA257_4478 9db42d394cf820ff967f97c19aa20c8e 331 Gene3D G3DSA:1.10.287.90 26 111 7.5E-33 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_2332 068160e9a4c382249fddb310843a04db 326 SUPERFAMILY SSF52096 54 275 4.52E-44 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_2332 068160e9a4c382249fddb310843a04db 326 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 75 285 1.6E-48 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 PA257_2332 068160e9a4c382249fddb310843a04db 326 Gene3D G3DSA:3.40.1750.20 177 245 3.0E-66 T 12-10-2018 PA257_2332 068160e9a4c382249fddb310843a04db 326 Pfam PF01343 Peptidase family S49 141 289 2.2E-35 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PA257_2332 068160e9a4c382249fddb310843a04db 326 Gene3D G3DSA:3.90.226.10 77 276 3.0E-66 T 12-10-2018 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.3E-21 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 Pfam PF02978 Signal peptide binding domain 329 430 1.4E-32 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 SUPERFAMILY SSF52540 42 354 5.75E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 Gene3D G3DSA:1.10.260.30 328 454 5.8E-42 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 Gene3D G3DSA:3.40.50.300 90 285 2.3E-123 T 12-10-2018 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 SMART SM00963 1 86 2.1E-35 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 SUPERFAMILY SSF47446 329 433 8.99E-35 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 3.4E-74 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 SMART SM00962 100 296 2.1E-115 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 432 8.4E-177 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 SMART SM00382 99 247 3.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 Gene3D G3DSA:1.20.120.140 4 306 2.3E-123 T 12-10-2018 PA257_1473 1c23eb3808670651d8b3d1f08ba9f529 457 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 443 34.471 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 PA257_4759 6487f059e85cf92c0bbe26a4de13d66a 173 Gene3D G3DSA:3.40.630.30 1 166 1.2E-23 T 12-10-2018 PA257_4759 6487f059e85cf92c0bbe26a4de13d66a 173 SUPERFAMILY SSF55729 3 162 2.4E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_4759 6487f059e85cf92c0bbe26a4de13d66a 173 Pfam PF00583 Acetyltransferase (GNAT) family 14 139 2.9E-17 T 12-10-2018 IPR000182 GNAT domain PA257_4516 2ecdb47f63e184f7ee631cfab0b647dc 501 Pfam PF07690 Major Facilitator Superfamily 15 404 8.1E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4516 2ecdb47f63e184f7ee631cfab0b647dc 501 Gene3D G3DSA:1.20.1720.10 9 215 1.5E-39 T 12-10-2018 PA257_4516 2ecdb47f63e184f7ee631cfab0b647dc 501 SUPERFAMILY SSF103473 3 488 7.98E-65 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4516 2ecdb47f63e184f7ee631cfab0b647dc 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.9E-7 T 12-10-2018 PA257_4516 2ecdb47f63e184f7ee631cfab0b647dc 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 1.9E-7 T 12-10-2018 PA257_4516 2ecdb47f63e184f7ee631cfab0b647dc 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 1.9E-7 T 12-10-2018 PA257_4516 2ecdb47f63e184f7ee631cfab0b647dc 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 298 322 1.9E-7 T 12-10-2018 PA257_4516 2ecdb47f63e184f7ee631cfab0b647dc 501 Gene3D G3DSA:1.20.1250.20 262 493 1.7E-19 T 12-10-2018 PA257_4485 ece9cd86e014bd5ba0c7fb4532679c46 303 Gene3D G3DSA:3.40.190.10 163 268 2.7E-53 T 12-10-2018 PA257_4485 ece9cd86e014bd5ba0c7fb4532679c46 303 Gene3D G3DSA:3.40.190.10 91 294 2.7E-53 T 12-10-2018 PA257_4485 ece9cd86e014bd5ba0c7fb4532679c46 303 Gene3D G3DSA:1.10.10.10 2 88 1.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4485 ece9cd86e014bd5ba0c7fb4532679c46 303 SUPERFAMILY SSF46785 3 87 1.14E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4485 ece9cd86e014bd5ba0c7fb4532679c46 303 Pfam PF03466 LysR substrate binding domain 88 297 6.2E-45 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4485 ece9cd86e014bd5ba0c7fb4532679c46 303 SUPERFAMILY SSF53850 89 299 1.71E-37 T 12-10-2018 PA257_4485 ece9cd86e014bd5ba0c7fb4532679c46 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 453 1.1E-173 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 Hamap MF_00195 GTPase Der [der]. 2 456 38.055 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 Gene3D G3DSA:3.40.50.300 193 368 5.4E-48 T 12-10-2018 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 4.4E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 Gene3D G3DSA:3.40.50.300 2 159 3.3E-42 T 12-10-2018 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 SUPERFAMILY SSF52540 137 459 4.09E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1369 437b8899cbaf125cb63f2250795bf699 493 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 373 453 4.9E-25 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like PA257_1369 437b8899cbaf125cb63f2250795bf699 493 Pfam PF01926 50S ribosome-binding GTPase 199 317 2.8E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 Pfam PF01926 50S ribosome-binding GTPase 5 119 8.4E-28 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 Gene3D G3DSA:3.30.300.20 373 454 6.1E-19 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_1369 437b8899cbaf125cb63f2250795bf699 493 SUPERFAMILY SSF52540 4 168 7.72E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1369 437b8899cbaf125cb63f2250795bf699 493 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 197 363 6.3E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 1.2E-20 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_1369 437b8899cbaf125cb63f2250795bf699 493 PIRSF PIRSF006485 1 461 2.8E-171 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 PA257_0800 89a293d9c9240aa1227f6e9246fb2872 116 Gene3D G3DSA:2.60.300.12 11 116 1.7E-34 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PA257_0800 89a293d9c9240aa1227f6e9246fb2872 116 SUPERFAMILY SSF89360 5 102 1.22E-31 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PA257_0800 89a293d9c9240aa1227f6e9246fb2872 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 115 8.0E-38 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 PA257_0800 89a293d9c9240aa1227f6e9246fb2872 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 PA257_0800 89a293d9c9240aa1227f6e9246fb2872 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 111 3.1E-19 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 PA257_0800 89a293d9c9240aa1227f6e9246fb2872 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.764 T 12-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 PA257_1543 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 Gene3D G3DSA:1.10.10.60 12 67 3.2E-20 T 12-10-2018 PA257_1543 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 SUPERFAMILY SSF46689 12 92 1.5E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1543 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1543 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1543 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 1.4E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1543 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 Gene3D G3DSA:1.10.357.10 76 211 2.0E-35 T 12-10-2018 PA257_1543 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 SUPERFAMILY SSF48498 91 202 8.16E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_1543 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 154 207 3.3E-12 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type PA257_2222 61d1f31abeb1d3c1efb27d80a841cbfb 361 Pfam PF14870 Photosynthesis system II assembly factor YCF48 147 233 5.1E-16 T 12-10-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain PA257_2222 61d1f31abeb1d3c1efb27d80a841cbfb 361 SUPERFAMILY SSF110296 74 319 2.09E-50 T 12-10-2018 PA257_2222 61d1f31abeb1d3c1efb27d80a841cbfb 361 Pfam PF15899 BNR-Asp box repeat 261 274 0.06 T 12-10-2018 IPR002860 BNR repeat PA257_2222 61d1f31abeb1d3c1efb27d80a841cbfb 361 Gene3D G3DSA:2.130.10.10 40 283 2.3E-26 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_2327 af55bbc04b18460381c32ca323027534 339 Gene3D G3DSA:3.30.465.10 75 228 9.3E-62 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_2327 af55bbc04b18460381c32ca323027534 339 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 339 88.4 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_2327 af55bbc04b18460381c32ca323027534 339 SUPERFAMILY SSF56194 212 338 3.01E-46 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_2327 af55bbc04b18460381c32ca323027534 339 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 11 335 2.9E-71 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_2327 af55bbc04b18460381c32ca323027534 339 SUPERFAMILY SSF56176 10 197 1.54E-46 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_2327 af55bbc04b18460381c32ca323027534 339 Pfam PF01565 FAD binding domain 24 156 1.6E-26 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PA257_2327 af55bbc04b18460381c32ca323027534 339 Gene3D G3DSA:3.90.78.10 229 339 9.6E-44 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_2327 af55bbc04b18460381c32ca323027534 339 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 216 338 3.2E-32 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_2327 af55bbc04b18460381c32ca323027534 339 Gene3D G3DSA:3.30.43.10 1 74 9.0E-31 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PA257_0603 79ae3f9407b854487fac42297a34cba5 474 SMART SM00387 365 474 2.7E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0603 79ae3f9407b854487fac42297a34cba5 474 SMART SM00388 255 320 3.4E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_0603 79ae3f9407b854487fac42297a34cba5 474 Gene3D G3DSA:3.30.565.10 318 473 1.7E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0603 79ae3f9407b854487fac42297a34cba5 474 SMART SM00304 204 255 3.5E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_0603 79ae3f9407b854487fac42297a34cba5 474 Gene3D G3DSA:3.30.450.20 48 166 1.5E-6 T 12-10-2018 PA257_0603 79ae3f9407b854487fac42297a34cba5 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 319 2.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_0603 79ae3f9407b854487fac42297a34cba5 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 465 1.7E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0603 79ae3f9407b854487fac42297a34cba5 474 Gene3D G3DSA:1.10.287.130 260 317 1.0E-11 T 12-10-2018 PA257_0603 79ae3f9407b854487fac42297a34cba5 474 Gene3D G3DSA:1.20.1480.50 167 259 2.3E-5 T 12-10-2018 PA257_0603 79ae3f9407b854487fac42297a34cba5 474 SUPERFAMILY SSF103190 79 179 4.32E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily PA257_0603 79ae3f9407b854487fac42297a34cba5 474 SUPERFAMILY SSF55874 310 473 9.95E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0603 79ae3f9407b854487fac42297a34cba5 474 Pfam PF00672 HAMP domain 205 251 2.0E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_0603 79ae3f9407b854487fac42297a34cba5 474 SUPERFAMILY SSF47384 241 319 2.75E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_0796 6565911d4e8a5b0cdf4e8401575290dd 140 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 2 140 1.2E-49 T 12-10-2018 IPR005265 Uncharacterised protein family UPF0093 PA257_0796 6565911d4e8a5b0cdf4e8401575290dd 140 Pfam PF03653 Uncharacterised protein family (UPF0093) 1 140 1.2E-56 T 12-10-2018 IPR005265 Uncharacterised protein family UPF0093 PA257_0796 6565911d4e8a5b0cdf4e8401575290dd 140 PIRSF PIRSF004638 1 140 6.3E-62 T 12-10-2018 IPR005265 Uncharacterised protein family UPF0093 PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 SUPERFAMILY SSF56801 208 752 9.03E-142 T 12-10-2018 PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 Pfam PF00501 AMP-binding enzyme 245 633 1.0E-87 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 SUPERFAMILY SSF52777 1004 1238 2.11E-30 T 12-10-2018 PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 Pfam PF00668 Condensation domain 823 1150 1.3E-34 T 12-10-2018 IPR001242 Condensation domain PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 Pfam PF00550 Phosphopantetheine attachment site 742 804 3.3E-6 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 SUPERFAMILY SSF52777 824 980 2.22E-18 T 12-10-2018 PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 Gene3D G3DSA:3.30.300.30 629 725 2.3E-28 T 12-10-2018 PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 SUPERFAMILY SSF47336 735 823 1.7E-8 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 Gene3D G3DSA:3.40.50.12780 233 628 4.6E-123 T 12-10-2018 PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 ProSitePatterns PS00455 Putative AMP-binding domain signature. 385 396 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 ProSitePatterns PS00012 Phosphopantetheine attachment site. 763 778 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 Gene3D G3DSA:3.30.559.30 997 1230 4.1E-63 T 12-10-2018 PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 266 657 7.8E-119 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 Gene3D G3DSA:1.10.1200.10 726 811 1.2E-11 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 Gene3D G3DSA:3.30.559.10 824 1184 4.1E-63 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3339 5abff1b95e1899a8e5b986c2b559f9aa 1249 Pfam PF13193 AMP-binding enzyme C-terminal domain 642 715 6.7E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 PRINTS PR00415 Aconitase family signature 469 482 1.4E-28 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 PRINTS PR00415 Aconitase family signature 281 294 1.4E-28 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 PRINTS PR00415 Aconitase family signature 205 220 1.4E-28 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 PRINTS PR00415 Aconitase family signature 267 280 1.4E-28 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 PRINTS PR00415 Aconitase family signature 191 204 1.4E-28 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 PRINTS PR00415 Aconitase family signature 162 170 1.4E-28 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 PRINTS PR00415 Aconitase family signature 407 418 1.4E-28 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 PRINTS PR00415 Aconitase family signature 138 151 1.4E-28 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 PRINTS PR00415 Aconitase family signature 360 374 1.4E-28 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 SUPERFAMILY SSF52016 603 862 7.85E-68 T 12-10-2018 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 Pfam PF00694 Aconitase C-terminal domain 661 792 3.7E-30 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 Gene3D G3DSA:1.10.1440.20 566 623 1.7E-7 T 12-10-2018 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 Gene3D G3DSA:3.30.499.20 10 360 1.6E-131 T 12-10-2018 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 SUPERFAMILY SSF53732 23 591 1.44E-183 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 Pfam PF00330 Aconitase family (aconitate hydratase) 70 538 5.5E-149 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 Gene3D G3DSA:3.20.19.10 624 863 1.5E-82 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 864 0.0 T 12-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 PA257_5112 4db7c6382ac7ae48a80fb4596e164517 868 Gene3D G3DSA:3.30.499.10 361 565 2.0E-75 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 6 324 2.7E-126 T 12-10-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 Gene3D G3DSA:3.30.360.20 183 275 3.3E-114 T 12-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 PIRSF PIRSF005378 2 339 3.9E-97 T 12-10-2018 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 SUPERFAMILY SSF55205 271 331 1.96E-6 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 Pfam PF01137 RNA 3'-terminal phosphate cyclase 12 324 4.5E-77 T 12-10-2018 IPR023797 RNA 3'-terminal phosphate cyclase domain PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 Hamap MF_00200 RNA 3'-terminal phosphate cyclase [rtcA]. 5 338 38.81 T 12-10-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 ProSitePatterns PS01287 RNA 3'-terminal phosphate cyclase signature. 156 166 - T 12-10-2018 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 Gene3D G3DSA:3.65.10.20 8 324 3.3E-114 T 12-10-2018 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 SUPERFAMILY SSF52913 184 278 3.92E-24 T 12-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 Pfam PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain 183 272 1.3E-8 T 12-10-2018 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain PA257_5764 6ba147bb2fb0e512850cc30554e1550f 341 SUPERFAMILY SSF55205 5 175 1.5E-58 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PA257_6300 4fcba4dd254c8b38e8d4d476dc3ae247 332 Gene3D G3DSA:3.40.50.2000 144 326 2.8E-57 T 12-10-2018 PA257_6300 4fcba4dd254c8b38e8d4d476dc3ae247 332 SUPERFAMILY SSF53756 1 325 1.26E-92 T 12-10-2018 PA257_6300 4fcba4dd254c8b38e8d4d476dc3ae247 332 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 1 324 1.5E-152 T 12-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 PA257_6300 4fcba4dd254c8b38e8d4d476dc3ae247 332 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 56 305 5.0E-91 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 PA257_6300 4fcba4dd254c8b38e8d4d476dc3ae247 332 Gene3D G3DSA:3.40.50.2000 1 134 5.0E-47 T 12-10-2018 PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 428 4.1E-155 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 Gene3D G3DSA:2.120.10.30 162 432 1.0E-87 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 4 427 45.104 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 Gene3D G3DSA:3.40.50.10070 24 161 6.3E-43 T 12-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 236 271 7.8E-13 T 12-10-2018 IPR011659 WD40-like Beta Propeller PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 279 314 1.9E-13 T 12-10-2018 IPR011659 WD40-like Beta Propeller PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 200 227 9.6E-7 T 12-10-2018 IPR011659 WD40-like Beta Propeller PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 372 400 0.043 T 12-10-2018 IPR011659 WD40-like Beta Propeller PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF04052 TolB amino-terminal domain 25 126 6.2E-30 T 12-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 SUPERFAMILY SSF69304 153 429 2.22E-54 T 12-10-2018 PA257_4865 0fc8f5568ecfc9aa4a711002589b18fe 432 SUPERFAMILY SSF52964 29 158 2.75E-39 T 12-10-2018 PA257_1730 b17bb6cccde1781451c2ce83abb81dbf 382 Gene3D G3DSA:3.40.640.10 2 253 2.6E-93 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_1730 b17bb6cccde1781451c2ce83abb81dbf 382 Gene3D G3DSA:3.90.1150.10 254 382 4.9E-37 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_1730 b17bb6cccde1781451c2ce83abb81dbf 382 SUPERFAMILY SSF53383 5 378 1.01E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_1730 b17bb6cccde1781451c2ce83abb81dbf 382 PIRSF PIRSF000390 1 382 8.8E-109 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PA257_1730 b17bb6cccde1781451c2ce83abb81dbf 382 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 2 380 67.691 T 12-10-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 PA257_1730 b17bb6cccde1781451c2ce83abb81dbf 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 374 1.3E-123 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 Gene3D G3DSA:3.30.70.1320 135 334 0.0 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 SUPERFAMILY SSF82693 569 675 7.06E-25 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 Gene3D G3DSA:3.30.70.1430 40 821 0.0 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 Gene3D G3DSA:1.20.1640.10 10 516 0.0 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.7E-84 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-84 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-84 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.7E-84 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 1.7E-84 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 PRINTS PR00702 Acriflavin resistance protein family signature 625 639 1.7E-84 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.7E-84 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.7E-84 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.7E-84 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 Gene3D G3DSA:1.20.1640.10 517 1027 0.0 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 SUPERFAMILY SSF82693 676 861 9.94E-27 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1036 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 SUPERFAMILY SSF82714 185 273 3.27E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 Gene3D G3DSA:3.30.2090.10 181 277 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 Gene3D G3DSA:3.30.70.1440 673 870 0.0 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 SUPERFAMILY SSF82693 137 332 5.75E-25 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 SUPERFAMILY SSF82866 298 499 4.32E-51 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 Gene3D G3DSA:3.30.70.1430 571 672 0.0 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 Pfam PF00873 AcrB/AcrD/AcrF family 4 1031 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 SUPERFAMILY SSF82866 835 1030 3.4E-43 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 SUPERFAMILY SSF82693 40 134 1.15E-27 T 12-10-2018 PA257_1761 3322b2cb7596d3476d642f6ce0d4ae30 1053 SUPERFAMILY SSF82714 726 811 4.71E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_1460 bcd8020251fa6b127637340eaded987b 363 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 37 360 1.2E-71 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 PA257_1460 bcd8020251fa6b127637340eaded987b 363 PIRSF PIRSF038994 3 363 6.5E-97 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 PA257_1460 bcd8020251fa6b127637340eaded987b 363 SUPERFAMILY SSF51338 3 362 5.28E-8 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_1460 bcd8020251fa6b127637340eaded987b 363 Pfam PF01979 Amidohydrolase family 41 361 5.8E-12 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_1460 bcd8020251fa6b127637340eaded987b 363 Gene3D G3DSA:3.20.20.140 45 334 2.2E-105 T 12-10-2018 PA257_1460 bcd8020251fa6b127637340eaded987b 363 SUPERFAMILY SSF51556 45 332 8.32E-83 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_1460 bcd8020251fa6b127637340eaded987b 363 Gene3D G3DSA:2.30.40.10 7 361 2.2E-105 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_1138 d62c52b732e804be69728c5a214be916 151 SUPERFAMILY SSF54637 9 146 5.08E-37 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_1138 d62c52b732e804be69728c5a214be916 151 Pfam PF01575 MaoC like domain 13 116 8.2E-26 T 12-10-2018 IPR002539 MaoC-like dehydratase domain PA257_1138 d62c52b732e804be69728c5a214be916 151 Gene3D G3DSA:3.10.129.10 3 149 1.4E-46 T 12-10-2018 PA257_2717 9ca1d474dd77a6446a712e57132e6dd9 253 SUPERFAMILY SSF54001 113 249 6.08E-9 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_2717 9ca1d474dd77a6446a712e57132e6dd9 253 Gene3D G3DSA:3.40.140.10 1 111 1.5E-23 T 12-10-2018 PA257_2717 9ca1d474dd77a6446a712e57132e6dd9 253 Pfam PF00877 NlpC/P60 family 116 244 4.8E-12 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain PA257_2717 9ca1d474dd77a6446a712e57132e6dd9 253 SMART SM00232 1 124 9.2E-10 T 12-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 PA257_2717 9ca1d474dd77a6446a712e57132e6dd9 253 Pfam PF14464 Prokaryotic homologs of the JAB domain 4 99 4.3E-18 T 12-10-2018 IPR028090 JAB domain, prokaryotic PA257_2717 9ca1d474dd77a6446a712e57132e6dd9 253 SUPERFAMILY SSF102712 3 136 1.05E-23 T 12-10-2018 PA257_2717 9ca1d474dd77a6446a712e57132e6dd9 253 Gene3D G3DSA:3.90.1720.10 113 248 5.6E-7 T 12-10-2018 PA257_6738 4d3c99bfef1d234c961d169f8a0ea9a8 55 PIRSF PIRSF000071 1 55 8.9E-26 T 12-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 PA257_6738 4d3c99bfef1d234c961d169f8a0ea9a8 55 Gene3D G3DSA:2.20.28.10 1 55 1.1E-29 T 12-10-2018 PA257_6738 4d3c99bfef1d234c961d169f8a0ea9a8 55 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 12-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 PA257_6738 4d3c99bfef1d234c961d169f8a0ea9a8 55 SUPERFAMILY SSF57802 1 53 1.26E-22 T 12-10-2018 PA257_6738 4d3c99bfef1d234c961d169f8a0ea9a8 55 Pfam PF00301 Rubredoxin 3 49 4.1E-23 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 PA257_6738 4d3c99bfef1d234c961d169f8a0ea9a8 55 PRINTS PR00163 Rubredoxin signature 3 19 4.3E-9 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 PA257_6738 4d3c99bfef1d234c961d169f8a0ea9a8 55 PRINTS PR00163 Rubredoxin signature 33 49 4.3E-9 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 PA257_3232 1252fc7f1d71c76e4da9be099838700e 251 SUPERFAMILY SSF52540 9 218 1.75E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3232 1252fc7f1d71c76e4da9be099838700e 251 Gene3D G3DSA:3.40.50.300 4 248 1.9E-45 T 12-10-2018 PA257_3232 1252fc7f1d71c76e4da9be099838700e 251 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3232 1252fc7f1d71c76e4da9be099838700e 251 Pfam PF00005 ABC transporter 31 171 1.2E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3232 1252fc7f1d71c76e4da9be099838700e 251 SMART SM00382 40 226 8.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2289 55fe83262017e2e23c660dbe95aef357 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 592 4.8E-25 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:1.10.1040.50 498 709 6.4E-81 T 12-10-2018 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF51735 314 496 1.76E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2289 55fe83262017e2e23c660dbe95aef357 715 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.229 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 495 2.9E-61 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF52096 2 308 8.83E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_2289 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF48179 622 714 6.29E-24 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:3.90.226.10 1 313 1.5E-117 T 12-10-2018 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:3.40.50.720 314 497 1.4E-68 T 12-10-2018 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF48179 496 616 3.57E-29 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_2289 55fe83262017e2e23c660dbe95aef357 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 212 8.4E-40 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 SUPERFAMILY SSF48256 6 427 6.54E-170 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 Gene3D G3DSA:1.10.230.10 268 376 2.8E-148 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 PIRSF PIRSF001369 37 428 3.3E-180 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 421 2.4E-239 T 12-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 4.7E-134 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 Gene3D G3DSA:2.20.28.60 1 50 8.2E-26 T 12-10-2018 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 Gene3D G3DSA:1.10.580.10 57 410 2.8E-148 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 379 393 7.9E-57 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 165 178 7.9E-57 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 219 234 7.9E-57 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 241 269 7.9E-57 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 296 316 7.9E-57 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_4203 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 359 375 7.9E-57 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_3523 608385dd7dd911a1f27e3f034bac04c1 315 Gene3D G3DSA:3.40.190.10 179 281 2.5E-47 T 12-10-2018 PA257_3523 608385dd7dd911a1f27e3f034bac04c1 315 Gene3D G3DSA:1.10.10.10 13 101 2.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3523 608385dd7dd911a1f27e3f034bac04c1 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 2.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3523 608385dd7dd911a1f27e3f034bac04c1 315 Gene3D G3DSA:3.40.190.10 105 298 2.5E-47 T 12-10-2018 PA257_3523 608385dd7dd911a1f27e3f034bac04c1 315 SUPERFAMILY SSF46785 13 123 1.47E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3523 608385dd7dd911a1f27e3f034bac04c1 315 SUPERFAMILY SSF53850 104 312 7.19E-39 T 12-10-2018 PA257_3523 608385dd7dd911a1f27e3f034bac04c1 315 Pfam PF03466 LysR substrate binding domain 103 308 1.3E-39 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_5688 96672cae38e1e6bc3f3d6b37a62fe168 493 Pfam PF13245 AAA domain 10 231 1.1E-8 T 12-10-2018 PA257_5688 96672cae38e1e6bc3f3d6b37a62fe168 493 Gene3D G3DSA:3.40.50.300 252 485 1.6E-14 T 12-10-2018 PA257_5688 96672cae38e1e6bc3f3d6b37a62fe168 493 Gene3D G3DSA:3.40.50.300 1 248 1.2E-22 T 12-10-2018 PA257_5688 96672cae38e1e6bc3f3d6b37a62fe168 493 Pfam PF13361 UvrD-like helicase C-terminal domain 368 467 2.1E-12 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PA257_5688 96672cae38e1e6bc3f3d6b37a62fe168 493 SUPERFAMILY SSF52540 2 472 3.63E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 3.6E-65 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 3.6E-65 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 3.6E-65 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 3.6E-65 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 3.6E-65 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 3.6E-65 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 3.6E-65 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 Pfam PF14841 FliG middle domain 120 193 5.0E-24 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 PIRSF PIRSF003161 5 338 4.3E-118 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 Pfam PF01706 FliG C-terminal domain 223 329 5.2E-41 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 SUPERFAMILY SSF48029 119 330 2.49E-69 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 Gene3D G3DSA:1.10.220.30 94 196 8.1E-25 T 12-10-2018 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 Pfam PF14842 FliG N-terminal domain 9 108 1.1E-33 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 Gene3D G3DSA:1.10.220.30 5 90 1.5E-20 T 12-10-2018 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 Gene3D G3DSA:1.10.220.30 200 338 2.1E-45 T 12-10-2018 PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 SUPERFAMILY SSF48029 12 122 8.24E-24 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical PA257_4712 088b736bb2473edf83917cc158a2e0b6 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 336 2.3E-102 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PA257_5511 914cd5e8baa53912d09d76bd59e25dcf 367 SUPERFAMILY SSF53955 50 354 1.04E-95 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_5511 914cd5e8baa53912d09d76bd59e25dcf 367 Gene3D G3DSA:1.10.8.350 62 235 6.7E-114 T 12-10-2018 PA257_5511 914cd5e8baa53912d09d76bd59e25dcf 367 Gene3D G3DSA:1.10.530.10 100 355 6.7E-114 T 12-10-2018 PA257_5511 914cd5e8baa53912d09d76bd59e25dcf 367 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 63 355 2.4E-116 T 12-10-2018 IPR011757 Lytic transglycosylase MltB PA257_5511 914cd5e8baa53912d09d76bd59e25dcf 367 Pfam PF13406 Transglycosylase SLT domain 59 352 8.3E-93 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 PA257_4958 d1a22c957dab86beed3d523722b61325 651 Gene3D G3DSA:3.40.50.12780 50 515 1.1E-103 T 12-10-2018 PA257_4958 d1a22c957dab86beed3d523722b61325 651 SUPERFAMILY SSF56801 17 642 3.01E-183 T 12-10-2018 PA257_4958 d1a22c957dab86beed3d523722b61325 651 Gene3D G3DSA:3.30.300.30 518 651 1.7E-29 T 12-10-2018 PA257_4958 d1a22c957dab86beed3d523722b61325 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.8E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_4958 d1a22c957dab86beed3d523722b61325 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 643 0.0 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 PA257_4958 d1a22c957dab86beed3d523722b61325 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.9E-22 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 PA257_4958 d1a22c957dab86beed3d523722b61325 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_4958 d1a22c957dab86beed3d523722b61325 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 51.986 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 PA257_4958 d1a22c957dab86beed3d523722b61325 651 Pfam PF00501 AMP-binding enzyme 83 522 3.0E-92 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3090 3d79c3a9a46a4180d40739e51ac42701 333 SUPERFAMILY SSF51679 7 328 2.88E-85 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_3090 3d79c3a9a46a4180d40739e51ac42701 333 Gene3D G3DSA:3.20.20.30 4 331 3.0E-98 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_3090 3d79c3a9a46a4180d40739e51ac42701 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 328 3.9E-130 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 PA257_3090 3d79c3a9a46a4180d40739e51ac42701 333 Pfam PF00296 Luciferase-like monooxygenase 24 306 6.3E-39 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_4723 868afa82db086ace8904e00af87bd69f 387 Gene3D G3DSA:1.10.8.410 335 387 2.0E-25 T 12-10-2018 PA257_4723 868afa82db086ace8904e00af87bd69f 387 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.6E-43 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PA257_4723 868afa82db086ace8904e00af87bd69f 387 PRINTS PR00207 Flagellin signature 37 54 1.2E-25 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PA257_4723 868afa82db086ace8904e00af87bd69f 387 PRINTS PR00207 Flagellin signature 76 95 1.2E-25 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PA257_4723 868afa82db086ace8904e00af87bd69f 387 PRINTS PR00207 Flagellin signature 111 134 1.2E-25 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PA257_4723 868afa82db086ace8904e00af87bd69f 387 SUPERFAMILY SSF64518 1 387 8.37E-105 T 12-10-2018 PA257_4723 868afa82db086ace8904e00af87bd69f 387 Pfam PF00700 Bacterial flagellin C-terminal helical region 303 386 9.0E-31 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PA257_4723 868afa82db086ace8904e00af87bd69f 387 Gene3D G3DSA:1.20.1330.10 60 332 6.2E-107 T 12-10-2018 PA257_4723 868afa82db086ace8904e00af87bd69f 387 Gene3D G3DSA:3.30.70.3070 165 285 6.2E-107 T 12-10-2018 PA257_3853 84448ee8384d363a5706e98d0ae9e96c 424 Pfam PF00487 Fatty acid desaturase 86 357 1.2E-7 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 ProSitePatterns PS01244 Aconitase family signature 2. 512 525 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 910 0.0 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 SUPERFAMILY SSF53732 5 645 4.05E-227 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 PRINTS PR00415 Aconitase family signature 450 461 7.7E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 PRINTS PR00415 Aconitase family signature 372 386 7.7E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 PRINTS PR00415 Aconitase family signature 279 292 7.7E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 PRINTS PR00415 Aconitase family signature 170 178 7.7E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 PRINTS PR00415 Aconitase family signature 293 306 7.7E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 PRINTS PR00415 Aconitase family signature 512 525 7.7E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 PRINTS PR00415 Aconitase family signature 203 216 7.7E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 PRINTS PR00415 Aconitase family signature 146 159 7.7E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 PRINTS PR00415 Aconitase family signature 217 232 7.7E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 Gene3D G3DSA:3.20.19.10 672 910 1.7E-110 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 Gene3D G3DSA:3.30.499.20 6 372 2.8E-160 T 12-10-2018 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 Pfam PF00330 Aconitase family (aconitate hydratase) 75 581 1.2E-182 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 ProSitePatterns PS00450 Aconitase family signature 1. 446 462 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 Gene3D G3DSA:3.30.499.10 373 609 1.1E-101 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 SUPERFAMILY SSF52016 649 909 1.18E-90 T 12-10-2018 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 Gene3D G3DSA:1.10.1440.20 610 669 2.3E-19 T 12-10-2018 PA257_4224 09ba5800fa23dc72504b1ade79dfe629 910 Pfam PF00694 Aconitase C-terminal domain 710 837 6.8E-50 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 44.769 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 Gene3D G3DSA:3.20.190.10 2 129 1.4E-40 T 12-10-2018 IPR035937 MutM-like, N-terminal PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 5.2E-23 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 SUPERFAMILY SSF81624 2 135 1.15E-40 T 12-10-2018 IPR035937 MutM-like, N-terminal PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 SMART SM00898 2 116 1.5E-55 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 6.4E-9 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 Gene3D G3DSA:1.10.8.50 132 270 3.6E-42 T 12-10-2018 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 SUPERFAMILY SSF46946 131 222 1.09E-27 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 SUPERFAMILY SSF57716 218 269 1.17E-16 T 12-10-2018 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 1.6E-33 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 SMART SM01232 130 222 6.8E-46 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PA257_0431 e454116f66a25fd6e3c6691e7bcb9837 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 1.1E-91 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PA257_1721 4bc8f7bfc9352d4069d7d6a38d344104 314 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 307 7.2E-104 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 PA257_1721 4bc8f7bfc9352d4069d7d6a38d344104 314 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 4 307 1.5E-104 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 PA257_1721 4bc8f7bfc9352d4069d7d6a38d344104 314 SUPERFAMILY SSF53613 4 295 8.26E-64 T 12-10-2018 IPR029056 Ribokinase-like PA257_1721 4bc8f7bfc9352d4069d7d6a38d344104 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PA257_1721 4bc8f7bfc9352d4069d7d6a38d344104 314 Pfam PF00294 pfkB family carbohydrate kinase 17 289 4.0E-42 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB PA257_1721 4bc8f7bfc9352d4069d7d6a38d344104 314 PIRSF PIRSF000535 1 310 4.2E-83 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 PA257_1721 4bc8f7bfc9352d4069d7d6a38d344104 314 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PA257_1721 4bc8f7bfc9352d4069d7d6a38d344104 314 Gene3D G3DSA:3.40.1190.20 1 309 4.8E-96 T 12-10-2018 IPR029056 Ribokinase-like PA257_4514 3401976e612652d2249428de91807fe2 606 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 2.3E-19 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_4514 3401976e612652d2249428de91807fe2 606 SUPERFAMILY SSF47203 287 474 1.43E-43 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_4514 3401976e612652d2249428de91807fe2 606 Gene3D G3DSA:2.40.110.10 161 286 1.2E-28 T 12-10-2018 PA257_4514 3401976e612652d2249428de91807fe2 606 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 493 598 2.4E-22 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PA257_4514 3401976e612652d2249428de91807fe2 606 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 454 6.1E-19 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_4514 3401976e612652d2249428de91807fe2 606 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 157 3.8E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_4514 3401976e612652d2249428de91807fe2 606 SUPERFAMILY SSF56645 38 279 3.27E-60 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_4514 3401976e612652d2249428de91807fe2 606 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 27 7.1E-8 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PA257_4514 3401976e612652d2249428de91807fe2 606 Gene3D G3DSA:1.20.140.10 287 459 3.0E-40 T 12-10-2018 PA257_4514 3401976e612652d2249428de91807fe2 606 Gene3D G3DSA:1.10.540.10 16 159 6.2E-19 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_1671 b7176690f0941b834b72189f317e8eb0 123 Gene3D G3DSA:1.10.3830.10 7 123 1.2E-36 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 PA257_1671 b7176690f0941b834b72189f317e8eb0 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 20 121 2.6E-32 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 PA257_1671 b7176690f0941b834b72189f317e8eb0 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 74 85 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 PA257_2266 0bf31d3f34e5930b04ec296702f03228 185 SUPERFAMILY SSF46689 4 74 3.8E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2266 0bf31d3f34e5930b04ec296702f03228 185 Gene3D G3DSA:1.10.357.10 1 185 4.0E-57 T 12-10-2018 PA257_2266 0bf31d3f34e5930b04ec296702f03228 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 2.4E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2266 0bf31d3f34e5930b04ec296702f03228 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 8.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2266 0bf31d3f34e5930b04ec296702f03228 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 8.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2266 0bf31d3f34e5930b04ec296702f03228 185 SUPERFAMILY SSF48498 76 180 3.56E-14 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_3671 905dc1d4bfb28f51d9dbb9b172c8e652 393 SUPERFAMILY SSF53383 6 376 2.45E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3671 905dc1d4bfb28f51d9dbb9b172c8e652 393 Gene3D G3DSA:3.40.640.10 17 262 3.2E-133 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_3671 905dc1d4bfb28f51d9dbb9b172c8e652 393 PIRSF PIRSF005572 3 380 1.6E-108 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 PA257_3671 905dc1d4bfb28f51d9dbb9b172c8e652 393 Pfam PF00266 Aminotransferase class-V 7 367 3.0E-73 T 12-10-2018 IPR000192 Aminotransferase class V domain PA257_3671 905dc1d4bfb28f51d9dbb9b172c8e652 393 Gene3D G3DSA:3.90.1150.10 7 374 3.2E-133 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_3671 905dc1d4bfb28f51d9dbb9b172c8e652 393 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PA257_6538 aba1ee9188b5ca60eb98327029229810 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PA257_6538 aba1ee9188b5ca60eb98327029229810 387 Gene3D G3DSA:3.40.50.1970 1 185 9.6E-49 T 12-10-2018 PA257_6538 aba1ee9188b5ca60eb98327029229810 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 378 6.0E-114 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 PA257_6538 aba1ee9188b5ca60eb98327029229810 387 SUPERFAMILY SSF56796 2 387 3.79E-115 T 12-10-2018 PA257_6538 aba1ee9188b5ca60eb98327029229810 387 Gene3D G3DSA:1.20.1090.10 186 387 2.9E-66 T 12-10-2018 PA257_6138 6eaaa92eb29fbd0f263a73dc17a0e3d9 285 Gene3D G3DSA:3.40.50.300 40 285 1.8E-53 T 12-10-2018 PA257_6138 6eaaa92eb29fbd0f263a73dc17a0e3d9 285 Pfam PF00005 ABC transporter 60 215 2.7E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6138 6eaaa92eb29fbd0f263a73dc17a0e3d9 285 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 263 284 1.6E-8 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PA257_6138 6eaaa92eb29fbd0f263a73dc17a0e3d9 285 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 44 285 2.2E-116 T 12-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD PA257_6138 6eaaa92eb29fbd0f263a73dc17a0e3d9 285 SUPERFAMILY SSF52540 44 283 1.67E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1675 25f872dd2fc6076195a5d01a68b23ab3 261 SMART SM00421 199 256 3.0E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1675 25f872dd2fc6076195a5d01a68b23ab3 261 SUPERFAMILY SSF46894 196 258 3.03E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_1675 25f872dd2fc6076195a5d01a68b23ab3 261 Gene3D G3DSA:1.10.10.10 156 260 1.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1675 25f872dd2fc6076195a5d01a68b23ab3 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 232 244 4.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1675 25f872dd2fc6076195a5d01a68b23ab3 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 216 4.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1675 25f872dd2fc6076195a5d01a68b23ab3 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 232 4.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1675 25f872dd2fc6076195a5d01a68b23ab3 261 ProSitePatterns PS00622 LuxR-type HTH domain signature. 216 243 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1675 25f872dd2fc6076195a5d01a68b23ab3 261 Pfam PF00196 Bacterial regulatory proteins, luxR family 201 252 9.8E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4175 82451d9b9cfbce02c67044fbd97e4f87 146 Pfam PF01638 HxlR-like helix-turn-helix 20 104 2.8E-19 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type PA257_4175 82451d9b9cfbce02c67044fbd97e4f87 146 SUPERFAMILY SSF46785 6 143 9.66E-39 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4175 82451d9b9cfbce02c67044fbd97e4f87 146 Gene3D G3DSA:1.10.10.10 2 146 7.1E-42 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6285 6c2f24906ebfd1ff46d75e1a4c05c2db 603 Pfam PF00005 ABC transporter 373 523 2.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6285 6c2f24906ebfd1ff46d75e1a4c05c2db 603 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6285 6c2f24906ebfd1ff46d75e1a4c05c2db 603 SUPERFAMILY SSF52540 347 591 1.44E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6285 6c2f24906ebfd1ff46d75e1a4c05c2db 603 Pfam PF00664 ABC transporter transmembrane region 31 306 2.9E-49 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PA257_6285 6c2f24906ebfd1ff46d75e1a4c05c2db 603 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 15 595 7.0E-257 T 12-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 PA257_6285 6c2f24906ebfd1ff46d75e1a4c05c2db 603 Gene3D G3DSA:1.20.1560.10 16 339 1.5E-75 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_6285 6c2f24906ebfd1ff46d75e1a4c05c2db 603 Gene3D G3DSA:3.40.50.300 340 593 2.3E-94 T 12-10-2018 PA257_6285 6c2f24906ebfd1ff46d75e1a4c05c2db 603 SUPERFAMILY SSF90123 18 338 9.16E-72 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_6285 6c2f24906ebfd1ff46d75e1a4c05c2db 603 SMART SM00382 382 575 4.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 368 427 5.2E-14 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 Gene3D G3DSA:1.10.287.560 367 427 5.4E-19 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 Gene3D G3DSA:3.30.565.10 428 614 4.9E-55 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 SUPERFAMILY SSF50341 614 746 1.31E-31 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 SUPERFAMILY SSF47384 368 428 5.89E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 614 4.5E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 SUPERFAMILY SSF47226 6 128 3.14E-33 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 SMART SM00387 472 615 1.5E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 SMART SM01231 367 427 9.7E-19 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 569 4.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 593 4.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 612 4.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 4.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 Pfam PF01584 CheW-like domain 621 748 2.2E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 Gene3D G3DSA:1.20.120.160 2 140 2.3E-39 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 SMART SM00073 6 103 3.0E-19 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 Pfam PF01627 Hpt domain 8 100 8.3E-18 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 Gene3D G3DSA:2.30.30.40 615 742 1.8E-36 T 12-10-2018 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 Gene3D G3DSA:2.40.50.180 638 701 1.8E-36 T 12-10-2018 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 SMART SM00260 607 746 4.0E-42 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_4335 41930f1b306bd312c88043ed8fce0be0 753 SUPERFAMILY SSF55874 430 613 7.47E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2463 165951bfc8947a6ab4dd534759161fbb 142 Gene3D G3DSA:2.20.25.10 1 47 1.7E-24 T 12-10-2018 PA257_2463 165951bfc8947a6ab4dd534759161fbb 142 Pfam PF02566 OsmC-like protein 44 138 4.4E-17 T 12-10-2018 IPR003718 OsmC/Ohr family PA257_2463 165951bfc8947a6ab4dd534759161fbb 142 Gene3D G3DSA:3.30.300.20 48 141 5.4E-34 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_2463 165951bfc8947a6ab4dd534759161fbb 142 SUPERFAMILY SSF82784 1 140 2.36E-47 T 12-10-2018 IPR036102 OsmC/Ohr superfamily PA257_2463 165951bfc8947a6ab4dd534759161fbb 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 140 5.5E-57 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 PA257_4872 f54cbf958f5188d675f1a61e00854b46 128 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 67 101 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 PA257_4872 f54cbf958f5188d675f1a61e00854b46 128 Gene3D G3DSA:3.30.420.10 1 112 1.5E-33 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_4872 f54cbf958f5188d675f1a61e00854b46 128 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 2 109 5.0E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PA257_4872 f54cbf958f5188d675f1a61e00854b46 128 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 80 5.6E-32 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PA257_4872 f54cbf958f5188d675f1a61e00854b46 128 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 37 53 5.6E-32 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PA257_4872 f54cbf958f5188d675f1a61e00854b46 128 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 15 31 5.6E-32 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PA257_4872 f54cbf958f5188d675f1a61e00854b46 128 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 92 104 5.6E-32 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PA257_4872 f54cbf958f5188d675f1a61e00854b46 128 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 2 104 2.1E-46 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PA257_4872 f54cbf958f5188d675f1a61e00854b46 128 SUPERFAMILY SSF53098 2 110 4.93E-33 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_4872 f54cbf958f5188d675f1a61e00854b46 128 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 107 32.257 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PA257_2528 32707da98f648a89d34d65bb807b478e 323 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 202 320 1.8E-45 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PA257_2528 32707da98f648a89d34d65bb807b478e 323 Gene3D G3DSA:3.40.30.10 8 166 6.2E-19 T 12-10-2018 PA257_2528 32707da98f648a89d34d65bb807b478e 323 Gene3D G3DSA:2.170.150.20 183 322 7.0E-50 T 12-10-2018 PA257_2528 32707da98f648a89d34d65bb807b478e 323 SUPERFAMILY SSF51316 200 320 3.61E-49 T 12-10-2018 IPR011057 Mss4-like superfamily PA257_2528 32707da98f648a89d34d65bb807b478e 323 SUPERFAMILY SSF52833 11 166 4.95E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2528 32707da98f648a89d34d65bb807b478e 323 Pfam PF01641 SelR domain 205 320 1.3E-44 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PA257_2309 7605ee0e82b192f774ac8887240020b1 407 Gene3D G3DSA:2.40.30.10 127 264 7.3E-51 T 12-10-2018 PA257_2309 7605ee0e82b192f774ac8887240020b1 407 SUPERFAMILY SSF63380 106 271 6.64E-36 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_2309 7605ee0e82b192f774ac8887240020b1 407 SUPERFAMILY SSF54292 40 125 3.38E-23 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_2309 7605ee0e82b192f774ac8887240020b1 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 1.3E-17 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_2309 7605ee0e82b192f774ac8887240020b1 407 PIRSF PIRSF000044 2 407 9.3E-232 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PA257_2309 7605ee0e82b192f774ac8887240020b1 407 Gene3D G3DSA:3.40.50.80 275 392 1.1E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_2309 7605ee0e82b192f774ac8887240020b1 407 SUPERFAMILY SSF52343 257 402 3.14E-37 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_2309 7605ee0e82b192f774ac8887240020b1 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 4 407 65.216 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PA257_2309 7605ee0e82b192f774ac8887240020b1 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 116 3.3E-11 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_2309 7605ee0e82b192f774ac8887240020b1 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 1.5E-9 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PA257_2309 7605ee0e82b192f774ac8887240020b1 407 Gene3D G3DSA:3.10.20.30 36 126 3.0E-27 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_2309 7605ee0e82b192f774ac8887240020b1 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 6 407 5.2E-230 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PA257_6341 2dafd01ac5bcd4c8f25a771be91e66dd 739 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 738 25.209 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PA257_6341 2dafd01ac5bcd4c8f25a771be91e66dd 739 SUPERFAMILY SSF52540 413 616 1.78E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6341 2dafd01ac5bcd4c8f25a771be91e66dd 739 Pfam PF00270 DEAD/DEAH box helicase 207 367 1.8E-14 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_6341 2dafd01ac5bcd4c8f25a771be91e66dd 739 SMART SM00490 496 593 2.0E-9 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_6341 2dafd01ac5bcd4c8f25a771be91e66dd 739 Gene3D G3DSA:3.40.50.300 194 383 4.0E-78 T 12-10-2018 PA257_6341 2dafd01ac5bcd4c8f25a771be91e66dd 739 SMART SM00487 199 395 2.7E-25 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_6341 2dafd01ac5bcd4c8f25a771be91e66dd 739 TIGRFAM TIGR00595 priA: primosomal protein N' 225 736 5.5E-184 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PA257_6341 2dafd01ac5bcd4c8f25a771be91e66dd 739 Gene3D G3DSA:1.10.8.630 4 117 5.6E-34 T 12-10-2018 PA257_6341 2dafd01ac5bcd4c8f25a771be91e66dd 739 SUPERFAMILY SSF52540 175 383 1.2E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6341 2dafd01ac5bcd4c8f25a771be91e66dd 739 Pfam PF00271 Helicase conserved C-terminal domain 522 592 4.6E-6 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_5567 6825e5ad97fa76bb32e10f08e77261cb 405 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 330 342 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PA257_5567 6825e5ad97fa76bb32e10f08e77261cb 405 Gene3D G3DSA:3.90.230.10 169 402 1.7E-72 T 12-10-2018 PA257_5567 6825e5ad97fa76bb32e10f08e77261cb 405 SUPERFAMILY SSF53092 15 169 1.17E-25 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PA257_5567 6825e5ad97fa76bb32e10f08e77261cb 405 Pfam PF00557 Metallopeptidase family M24 178 384 4.9E-50 T 12-10-2018 IPR000994 Peptidase M24 PA257_5567 6825e5ad97fa76bb32e10f08e77261cb 405 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 169 1.2E-22 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 PA257_5567 6825e5ad97fa76bb32e10f08e77261cb 405 SUPERFAMILY SSF55920 136 393 2.62E-69 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like PA257_5567 6825e5ad97fa76bb32e10f08e77261cb 405 Gene3D G3DSA:3.40.350.10 1 168 2.5E-40 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PA257_2172 45fff50d51b4722d535911309a452f30 303 SUPERFAMILY SSF46785 10 116 2.83E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2172 45fff50d51b4722d535911309a452f30 303 Gene3D G3DSA:3.40.190.10 95 296 3.7E-65 T 12-10-2018 PA257_2172 45fff50d51b4722d535911309a452f30 303 SUPERFAMILY SSF53850 94 298 3.26E-42 T 12-10-2018 PA257_2172 45fff50d51b4722d535911309a452f30 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 1.2E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2172 45fff50d51b4722d535911309a452f30 303 Gene3D G3DSA:3.40.190.10 167 268 3.7E-65 T 12-10-2018 PA257_2172 45fff50d51b4722d535911309a452f30 303 Gene3D G3DSA:1.10.10.10 8 94 2.4E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2172 45fff50d51b4722d535911309a452f30 303 Pfam PF03466 LysR substrate binding domain 92 298 1.6E-40 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0350 bf7894a76566423af056e05f78af638d 189 SMART SM00052 1 176 5.1E-48 T 12-10-2018 IPR001633 EAL domain PA257_0350 bf7894a76566423af056e05f78af638d 189 SUPERFAMILY SSF141868 1 178 4.84E-59 T 12-10-2018 IPR035919 EAL domain superfamily PA257_0350 bf7894a76566423af056e05f78af638d 189 Gene3D G3DSA:3.20.20.450 1 180 1.1E-68 T 12-10-2018 IPR035919 EAL domain superfamily PA257_0350 bf7894a76566423af056e05f78af638d 189 Pfam PF00563 EAL domain 1 171 3.0E-47 T 12-10-2018 IPR001633 EAL domain PA257_4114 19a52fb616784a0e0b3bac882cd7bbd7 335 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 320 1.6E-97 T 12-10-2018 IPR010732 Type VI secretion, TssG-like PA257_4114 19a52fb616784a0e0b3bac882cd7bbd7 335 Pfam PF06996 Type VI secretion, TssG 20 320 1.9E-88 T 12-10-2018 IPR010732 Type VI secretion, TssG-like PA257_6951 f1122abc552d9c951ddafc711c228fa2 394 SUPERFAMILY SSF53335 109 377 1.58E-85 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6951 f1122abc552d9c951ddafc711c228fa2 394 Pfam PF02353 Mycolic acid cyclopropane synthetase 98 372 2.6E-106 T 12-10-2018 PA257_6951 f1122abc552d9c951ddafc711c228fa2 394 Gene3D G3DSA:3.40.50.150 107 380 1.4E-102 T 12-10-2018 PA257_6951 f1122abc552d9c951ddafc711c228fa2 394 PIRSF PIRSF003085 1 394 1.3E-129 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 Pfam PF00459 Inositol monophosphatase family 1 258 1.1E-66 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 2.6E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 132 155 2.6E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 2.6E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.6E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.6E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 2.6E-62 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 SUPERFAMILY SSF56655 1 265 1.31E-84 T 12-10-2018 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 Gene3D G3DSA:3.30.540.10 1 142 1.3E-49 T 12-10-2018 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 Gene3D G3DSA:3.40.190.80 143 271 6.6E-38 T 12-10-2018 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 160 186 1.5E-21 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.5E-21 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 106 125 1.5E-21 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PA257_1350 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 202 214 1.5E-21 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PA257_4183 18598e33f12426f226327209d7665a7f 260 SMART SM00342 171 253 2.9E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4183 18598e33f12426f226327209d7665a7f 260 Gene3D G3DSA:2.60.120.10 12 90 6.6E-10 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4183 18598e33f12426f226327209d7665a7f 260 Gene3D G3DSA:1.10.10.60 155 258 2.0E-22 T 12-10-2018 PA257_4183 18598e33f12426f226327209d7665a7f 260 Pfam PF02311 AraC-like ligand binding domain 26 92 5.5E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_4183 18598e33f12426f226327209d7665a7f 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 5.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4183 18598e33f12426f226327209d7665a7f 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 5.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4183 18598e33f12426f226327209d7665a7f 260 SUPERFAMILY SSF51182 5 180 1.26E-18 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4183 18598e33f12426f226327209d7665a7f 260 SUPERFAMILY SSF46689 207 256 2.11E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4183 18598e33f12426f226327209d7665a7f 260 Pfam PF12833 Helix-turn-helix domain 177 254 2.1E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4183 18598e33f12426f226327209d7665a7f 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_1034 c222bc20629596a88d86ea09d5862535 728 SMART SM00388 503 566 1.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_1034 c222bc20629596a88d86ea09d5862535 728 Pfam PF08446 PAS fold 12 76 1.0E-10 T 12-10-2018 IPR013654 PAS fold-2 GO:0006355 PA257_1034 c222bc20629596a88d86ea09d5862535 728 SMART SM00387 610 721 3.4E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1034 c222bc20629596a88d86ea09d5862535 728 Gene3D G3DSA:3.30.565.10 571 719 2.2E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1034 c222bc20629596a88d86ea09d5862535 728 SUPERFAMILY SSF55781 311 493 4.51E-42 T 12-10-2018 PA257_1034 c222bc20629596a88d86ea09d5862535 728 Pfam PF00360 Phytochrome region 324 496 1.6E-47 T 12-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 PA257_1034 c222bc20629596a88d86ea09d5862535 728 Pfam PF01590 GAF domain 141 289 9.6E-18 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_1034 c222bc20629596a88d86ea09d5862535 728 SUPERFAMILY SSF55781 128 307 2.55E-60 T 12-10-2018 PA257_1034 c222bc20629596a88d86ea09d5862535 728 Gene3D G3DSA:3.30.450.40 9 469 6.9E-196 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_1034 c222bc20629596a88d86ea09d5862535 728 SUPERFAMILY SSF47384 494 566 5.49E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_1034 c222bc20629596a88d86ea09d5862535 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 716 7.3E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1034 c222bc20629596a88d86ea09d5862535 728 Gene3D G3DSA:3.30.450.270 309 486 6.9E-196 T 12-10-2018 PA257_1034 c222bc20629596a88d86ea09d5862535 728 PRINTS PR01033 Phytochrome signature 456 474 2.1E-22 T 12-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 PA257_1034 c222bc20629596a88d86ea09d5862535 728 PRINTS PR01033 Phytochrome signature 241 262 2.1E-22 T 12-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 PA257_1034 c222bc20629596a88d86ea09d5862535 728 PRINTS PR01033 Phytochrome signature 339 359 2.1E-22 T 12-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 PA257_1034 c222bc20629596a88d86ea09d5862535 728 PRINTS PR01033 Phytochrome signature 422 441 2.1E-22 T 12-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 PA257_1034 c222bc20629596a88d86ea09d5862535 728 PRINTS PR01033 Phytochrome signature 154 173 2.1E-22 T 12-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 PA257_1034 c222bc20629596a88d86ea09d5862535 728 SMART SM00065 139 313 6.5E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_1034 c222bc20629596a88d86ea09d5862535 728 Pfam PF00512 His Kinase A (phospho-acceptor) domain 503 566 1.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_1034 c222bc20629596a88d86ea09d5862535 728 Gene3D G3DSA:1.10.287.130 494 567 3.1E-14 T 12-10-2018 PA257_1034 c222bc20629596a88d86ea09d5862535 728 SUPERFAMILY SSF55874 556 721 2.1E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1034 c222bc20629596a88d86ea09d5862535 728 Gene3D G3DSA:3.30.450.20 19 242 6.9E-196 T 12-10-2018 PA257_1034 c222bc20629596a88d86ea09d5862535 728 SUPERFAMILY SSF55785 6 115 1.62E-25 T 12-10-2018 IPR035965 PAS domain superfamily PA257_2548 3809865169aebf89e09d421582d03e0a 175 SMART SM00283 1 173 9.5E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2548 3809865169aebf89e09d421582d03e0a 175 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 101 130 4.7E-31 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2548 3809865169aebf89e09d421582d03e0a 175 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 24 51 4.7E-31 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2548 3809865169aebf89e09d421582d03e0a 175 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 53 82 4.7E-31 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2548 3809865169aebf89e09d421582d03e0a 175 Gene3D G3DSA:1.10.287.950 1 174 1.5E-54 T 12-10-2018 PA257_2548 3809865169aebf89e09d421582d03e0a 175 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 1 139 1.8E-45 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2548 3809865169aebf89e09d421582d03e0a 175 SUPERFAMILY SSF58104 2 174 3.01E-51 T 12-10-2018 PA257_2141 a7945f3f7821b46ad9f6dad6d6e26fe8 123 Pfam PF02706 Chain length determinant protein 14 107 3.6E-17 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 PA257_2141 a7945f3f7821b46ad9f6dad6d6e26fe8 123 SUPERFAMILY SSF160355 51 110 1.31E-7 T 12-10-2018 PA257_6229 a308c7c989183012fad8aa46bc42460e 633 SUPERFAMILY SSF54211 195 334 8.34E-41 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_6229 a308c7c989183012fad8aa46bc42460e 633 SUPERFAMILY SSF55874 5 206 1.83E-54 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6229 a308c7c989183012fad8aa46bc42460e 633 SMART SM00853 446 589 4.9E-57 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PA257_6229 a308c7c989183012fad8aa46bc42460e 633 Gene3D G3DSA:3.30.230.10 221 333 3.6E-39 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_6229 a308c7c989183012fad8aa46bc42460e 633 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 218 333 1.4E-40 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 PA257_6229 a308c7c989183012fad8aa46bc42460e 633 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 5 629 29.84 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 PA257_6229 a308c7c989183012fad8aa46bc42460e 633 Pfam PF08676 MutL C terminal dimerisation domain 442 589 2.0E-51 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PA257_6229 a308c7c989183012fad8aa46bc42460e 633 SUPERFAMILY SSF118116 442 631 2.62E-62 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily PA257_6229 a308c7c989183012fad8aa46bc42460e 633 Gene3D G3DSA:3.30.565.10 6 220 1.4E-69 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6229 a308c7c989183012fad8aa46bc42460e 633 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 6 314 3.3E-100 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 PA257_6229 a308c7c989183012fad8aa46bc42460e 633 SMART SM01340 216 334 8.4E-63 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 PA257_6229 a308c7c989183012fad8aa46bc42460e 633 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 126 7.1E-9 T 12-10-2018 PA257_6229 a308c7c989183012fad8aa46bc42460e 633 Gene3D G3DSA:3.30.1370.100 489 584 5.1E-58 T 12-10-2018 PA257_6229 a308c7c989183012fad8aa46bc42460e 633 Gene3D G3DSA:2.30.42.20 448 626 5.1E-58 T 12-10-2018 PA257_6229 a308c7c989183012fad8aa46bc42460e 633 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 97 103 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site PA257_2177 a14da35aa5927e6e11e5be5e0d37ef42 253 Gene3D G3DSA:3.40.50.150 23 246 5.7E-57 T 12-10-2018 PA257_2177 a14da35aa5927e6e11e5be5e0d37ef42 253 SUPERFAMILY SSF53335 9 240 2.17E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2177 a14da35aa5927e6e11e5be5e0d37ef42 253 Pfam PF08241 Methyltransferase domain 47 143 1.4E-25 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PA257_3023 5d1fdafb3913c8c371f6e7402e99f67e 141 Gene3D G3DSA:3.10.180.10 5 138 1.0E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_3023 5d1fdafb3913c8c371f6e7402e99f67e 141 SUPERFAMILY SSF54593 8 132 5.24E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_3023 5d1fdafb3913c8c371f6e7402e99f67e 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 132 2.9E-13 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_4275 016033aed5a393936ebf8cd1117e6a87 332 SUPERFAMILY SSF49785 5 168 6.38E-62 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily PA257_4275 016033aed5a393936ebf8cd1117e6a87 332 SUPERFAMILY SSF49785 177 329 3.27E-56 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily PA257_4275 016033aed5a393936ebf8cd1117e6a87 332 Hamap MF_00813 Probable allantoicase [alc]. 1 330 47.868 T 12-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 PA257_4275 016033aed5a393936ebf8cd1117e6a87 332 Pfam PF03561 Allantoicase repeat 187 327 1.2E-47 T 12-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 PA257_4275 016033aed5a393936ebf8cd1117e6a87 332 Pfam PF03561 Allantoicase repeat 20 164 1.3E-46 T 12-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 PA257_4275 016033aed5a393936ebf8cd1117e6a87 332 Gene3D G3DSA:2.60.120.260 2 168 2.3E-57 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily PA257_4275 016033aed5a393936ebf8cd1117e6a87 332 Gene3D G3DSA:2.60.120.260 170 332 1.4E-57 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily PA257_4275 016033aed5a393936ebf8cd1117e6a87 332 TIGRFAM TIGR02961 allantoicase: allantoicase 11 328 8.2E-142 T 12-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 PA257_4275 016033aed5a393936ebf8cd1117e6a87 332 PIRSF PIRSF016516 1 331 4.9E-151 T 12-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 PA257_1787 8c7d16f6a0192b115a98939d62e0d3fe 364 ProSitePatterns PS01215 Mrp family signature. 206 222 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 PA257_1787 8c7d16f6a0192b115a98939d62e0d3fe 364 Gene3D G3DSA:3.30.300.130 2 91 9.5E-8 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PA257_1787 8c7d16f6a0192b115a98939d62e0d3fe 364 Gene3D G3DSA:3.40.50.300 92 342 8.1E-85 T 12-10-2018 PA257_1787 8c7d16f6a0192b115a98939d62e0d3fe 364 Pfam PF01883 Iron-sulfur cluster assembly protein 6 79 5.8E-16 T 12-10-2018 IPR002744 MIP18 family-like PA257_1787 8c7d16f6a0192b115a98939d62e0d3fe 364 SUPERFAMILY SSF117916 4 82 1.05E-14 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PA257_1787 8c7d16f6a0192b115a98939d62e0d3fe 364 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 343 36.457 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein PA257_1787 8c7d16f6a0192b115a98939d62e0d3fe 364 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 342 6.9E-100 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PA257_1787 8c7d16f6a0192b115a98939d62e0d3fe 364 SUPERFAMILY SSF52540 89 327 8.55E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4371 4b662aa8876a29615a5bc74877b61642 440 Gene3D G3DSA:3.30.450.20 127 248 1.3E-21 T 12-10-2018 PA257_4371 4b662aa8876a29615a5bc74877b61642 440 Gene3D G3DSA:3.30.450.20 5 126 1.8E-23 T 12-10-2018 PA257_4371 4b662aa8876a29615a5bc74877b61642 440 SMART SM00086 93 135 0.049 T 12-10-2018 IPR001610 PAC motif PA257_4371 4b662aa8876a29615a5bc74877b61642 440 SMART SM00086 215 257 2.3E-6 T 12-10-2018 IPR001610 PAC motif PA257_4371 4b662aa8876a29615a5bc74877b61642 440 Pfam PF13426 PAS domain 37 132 2.6E-15 T 12-10-2018 IPR000014 PAS domain PA257_4371 4b662aa8876a29615a5bc74877b61642 440 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 436 3.4E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_4371 4b662aa8876a29615a5bc74877b61642 440 Pfam PF08447 PAS fold 165 250 5.7E-15 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_4371 4b662aa8876a29615a5bc74877b61642 440 SMART SM00283 246 440 1.7E-24 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_4371 4b662aa8876a29615a5bc74877b61642 440 SUPERFAMILY SSF55785 152 254 6.46E-25 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4371 4b662aa8876a29615a5bc74877b61642 440 SMART SM00091 140 209 9.5 T 12-10-2018 IPR000014 PAS domain PA257_4371 4b662aa8876a29615a5bc74877b61642 440 SMART SM00091 20 88 1.8E-4 T 12-10-2018 IPR000014 PAS domain PA257_4371 4b662aa8876a29615a5bc74877b61642 440 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 260 3.2E-15 T 12-10-2018 IPR000014 PAS domain PA257_4371 4b662aa8876a29615a5bc74877b61642 440 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 141 2.3E-16 T 12-10-2018 IPR000014 PAS domain PA257_4371 4b662aa8876a29615a5bc74877b61642 440 SUPERFAMILY SSF55785 30 132 3.91E-26 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4371 4b662aa8876a29615a5bc74877b61642 440 SUPERFAMILY SSF58104 250 435 1.44E-56 T 12-10-2018 PA257_4371 4b662aa8876a29615a5bc74877b61642 440 Gene3D G3DSA:1.10.287.950 249 438 1.7E-53 T 12-10-2018 PA257_1314 4ee32d69672c9bec9af0258224792407 250 Pfam PF01988 VIT family 32 242 5.2E-58 T 12-10-2018 IPR008217 Ccc1 family PA257_2854 b79ea215d31c30876eb65ce2b8dab068 272 SMART SM00342 178 261 1.3E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2854 b79ea215d31c30876eb65ce2b8dab068 272 SUPERFAMILY SSF46689 162 212 7.18E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2854 b79ea215d31c30876eb65ce2b8dab068 272 Gene3D G3DSA:1.10.10.60 161 220 2.9E-16 T 12-10-2018 PA257_2854 b79ea215d31c30876eb65ce2b8dab068 272 Gene3D G3DSA:1.10.10.60 221 271 8.0E-13 T 12-10-2018 PA257_2854 b79ea215d31c30876eb65ce2b8dab068 272 SUPERFAMILY SSF46689 214 262 1.66E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2854 b79ea215d31c30876eb65ce2b8dab068 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_2854 b79ea215d31c30876eb65ce2b8dab068 272 Pfam PF12833 Helix-turn-helix domain 184 262 7.6E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2235 3b067ee79034b2d8986846a8be3b3820 939 Pfam PF03537 Glycoside-hydrolase family GH114 63 283 1.8E-16 T 12-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain PA257_2235 3b067ee79034b2d8986846a8be3b3820 939 PIRSF PIRSF029570 1 939 0.0 T 12-10-2018 IPR016925 Uncharacterised conserved protein UCP029570 PA257_2235 3b067ee79034b2d8986846a8be3b3820 939 SUPERFAMILY SSF88713 561 778 1.72E-6 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PA257_2235 3b067ee79034b2d8986846a8be3b3820 939 Gene3D G3DSA:3.20.20.70 45 304 1.6E-22 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2235 3b067ee79034b2d8986846a8be3b3820 939 SUPERFAMILY SSF51445 43 296 5.69E-36 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_2235 3b067ee79034b2d8986846a8be3b3820 939 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 244 254 1.8E-6 T 12-10-2018 IPR016062 Hypothetical protein TM1410-related PA257_2235 3b067ee79034b2d8986846a8be3b3820 939 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 81 100 1.8E-6 T 12-10-2018 IPR016062 Hypothetical protein TM1410-related PA257_2235 3b067ee79034b2d8986846a8be3b3820 939 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 138 157 1.8E-6 T 12-10-2018 IPR016062 Hypothetical protein TM1410-related PA257_2235 3b067ee79034b2d8986846a8be3b3820 939 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 266 278 1.8E-6 T 12-10-2018 IPR016062 Hypothetical protein TM1410-related PA257_6754 5305c3e21a4455b45a70215bb3160137 277 SUPERFAMILY SSF52540 28 264 8.28E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6754 5305c3e21a4455b45a70215bb3160137 277 Gene3D G3DSA:3.40.50.300 26 274 1.3E-61 T 12-10-2018 PA257_6754 5305c3e21a4455b45a70215bb3160137 277 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 32 277 2.3E-125 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 PA257_6754 5305c3e21a4455b45a70215bb3160137 277 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6754 5305c3e21a4455b45a70215bb3160137 277 SMART SM00382 55 257 3.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6754 5305c3e21a4455b45a70215bb3160137 277 Pfam PF00005 ABC transporter 48 201 6.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 SMART SM00448 6 122 6.1E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 SMART SM00421 149 206 6.6E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 SUPERFAMILY SSF46894 140 208 5.44E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 Gene3D G3DSA:3.40.50.2300 3 144 4.6E-26 T 12-10-2018 PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 Pfam PF00072 Response regulator receiver domain 8 122 2.2E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 Gene3D G3DSA:1.10.10.10 145 209 2.2E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 SUPERFAMILY SSF52172 5 141 3.84E-24 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.0E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.0E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.0E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1068 1eb56143eda35e47f66f026420d53c0d 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 3.3E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_5184 a5b4796f221791e73545446548171892 642 Pfam PF00589 Phage integrase family 211 390 8.0E-20 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_5184 a5b4796f221791e73545446548171892 642 Gene3D G3DSA:1.10.443.10 210 400 8.8E-17 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_5184 a5b4796f221791e73545446548171892 642 Pfam PF13356 Arm DNA-binding domain 2 86 4.2E-14 T 12-10-2018 IPR025166 Integrase, DNA-binding domain PA257_5184 a5b4796f221791e73545446548171892 642 Gene3D G3DSA:1.10.150.130 97 209 1.4E-18 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_5184 a5b4796f221791e73545446548171892 642 Gene3D G3DSA:3.30.160.390 1 96 1.2E-26 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily PA257_5184 a5b4796f221791e73545446548171892 642 SUPERFAMILY SSF56349 98 400 1.91E-45 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_6785 d90504df7bf767662f53317443951557 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 6 377 4.1E-123 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 PA257_6785 d90504df7bf767662f53317443951557 384 Pfam PF07687 Peptidase dimerisation domain 171 280 3.2E-25 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain PA257_6785 d90504df7bf767662f53317443951557 384 SUPERFAMILY SSF55031 174 279 1.03E-21 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PA257_6785 d90504df7bf767662f53317443951557 384 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 100 137 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PA257_6785 d90504df7bf767662f53317443951557 384 SUPERFAMILY SSF53187 5 379 8.57E-61 T 12-10-2018 PA257_6785 d90504df7bf767662f53317443951557 384 Gene3D G3DSA:3.40.630.10 11 368 4.1E-106 T 12-10-2018 PA257_6785 d90504df7bf767662f53317443951557 384 Pfam PF01546 Peptidase family M20/M25/M40 66 378 5.4E-37 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 PA257_6785 d90504df7bf767662f53317443951557 384 Gene3D G3DSA:3.30.70.360 174 291 4.1E-106 T 12-10-2018 PA257_2094 299cb11e9fbae1bb6567a876267edb2a 99 SUPERFAMILY SSF54909 1 97 2.15E-30 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_2094 299cb11e9fbae1bb6567a876267edb2a 99 Gene3D G3DSA:3.30.70.1060 1 98 9.1E-36 T 12-10-2018 PA257_2094 299cb11e9fbae1bb6567a876267edb2a 99 Pfam PF03795 YCII-related domain 1 95 5.3E-30 T 12-10-2018 IPR005545 YCII-related PA257_2912 f20453b10e9529644f0b4478ba324de3 905 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 SUPERFAMILY SSF54862 81 213 1.17E-33 T 12-10-2018 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 652 2.0E-213 T 12-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 127 1.1E-14 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 SUPERFAMILY SSF53706 219 685 4.26E-86 T 12-10-2018 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 3.5E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 Gene3D G3DSA:2.20.25.90 221 275 4.7E-13 T 12-10-2018 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 Pfam PF00384 Molybdopterin oxidoreductase 550 635 2.2E-10 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 Gene3D G3DSA:3.10.20.740 1 128 1.0E-27 T 12-10-2018 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 SUPERFAMILY SSF50692 812 889 9.27E-8 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PA257_2912 f20453b10e9529644f0b4478ba324de3 905 SMART SM00926 221 275 1.4E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 75 2.7E-10 T 12-10-2018 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 SUPERFAMILY SSF54292 1 77 7.88E-19 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 SMART SM00929 88 128 2.6E-19 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2912 f20453b10e9529644f0b4478ba324de3 905 Gene3D G3DSA:3.40.50.740 480 687 1.1E-16 T 12-10-2018 PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SMART SM00271 4 62 5.7E-33 T 12-10-2018 IPR001623 DnaJ domain PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 25 40 1.7E-33 T 12-10-2018 IPR001623 DnaJ domain PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 42 62 1.7E-33 T 12-10-2018 IPR001623 DnaJ domain PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 62 81 1.7E-33 T 12-10-2018 IPR001623 DnaJ domain PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 7 25 1.7E-33 T 12-10-2018 IPR001623 DnaJ domain PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:2.60.260.20 258 364 4.4E-30 T 12-10-2018 PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Pfam PF00226 DnaJ domain 5 67 4.3E-28 T 12-10-2018 IPR001623 DnaJ domain PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Pfam PF01556 DnaJ C terminal domain 123 335 2.6E-44 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 12-10-2018 IPR018253 DnaJ domain, conserved site PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:1.10.287.110 1 113 1.4E-37 T 12-10-2018 IPR036869 Chaperone J-domain superfamily PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF46565 1 111 2.88E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF57938 136 213 3.79E-22 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 3.1E-140 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 42.81 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Pfam PF00684 DnaJ central domain 149 209 4.1E-14 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF49493 116 269 6.8E-21 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF49493 261 346 3.01E-22 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PA257_5977 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:2.10.230.10 149 213 1.3E-21 T 12-10-2018 PA257_0097 30e2e885c0c2281fcad03105e9a754cc 1176 Pfam PF06744 Type VI secretion protein IcmF C-terminal 924 1124 3.7E-69 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal PA257_0097 30e2e885c0c2281fcad03105e9a754cc 1176 Pfam PF14331 ImcF-related N-terminal domain 195 452 1.6E-99 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain PA257_0097 30e2e885c0c2281fcad03105e9a754cc 1176 Pfam PF06761 Intracellular multiplication and human macrophage-killing 504 797 3.0E-86 T 12-10-2018 IPR009612 ImcF-related PA257_0097 30e2e885c0c2281fcad03105e9a754cc 1176 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1174 0.0 T 12-10-2018 IPR017731 Type VI secretion system, IcmF PA257_0097 30e2e885c0c2281fcad03105e9a754cc 1176 SUPERFAMILY SSF52540 125 294 1.42E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4483 99608a5ee0e907cebb4d0d8ee52eb79e 196 Pfam PF07690 Major Facilitator Superfamily 6 145 8.6E-10 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4483 99608a5ee0e907cebb4d0d8ee52eb79e 196 SUPERFAMILY SSF103473 3 185 6.28E-19 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4483 99608a5ee0e907cebb4d0d8ee52eb79e 196 Gene3D G3DSA:1.20.1250.20 3 187 1.3E-15 T 12-10-2018 PA257_3185 dadd59e710b283ebcf409e33189eb596 418 Gene3D G3DSA:3.40.640.10 37 289 9.8E-186 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_3185 dadd59e710b283ebcf409e33189eb596 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.997 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_3185 dadd59e710b283ebcf409e33189eb596 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_3185 dadd59e710b283ebcf409e33189eb596 418 Gene3D G3DSA:3.90.1150.10 11 396 9.8E-186 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_3185 dadd59e710b283ebcf409e33189eb596 418 PIRSF PIRSF000412 1 418 1.5E-168 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_3185 dadd59e710b283ebcf409e33189eb596 418 SUPERFAMILY SSF53383 6 416 1.73E-182 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3185 dadd59e710b283ebcf409e33189eb596 418 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.1E-179 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 Pfam PF13361 UvrD-like helicase C-terminal domain 723 859 2.0E-12 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 SUPERFAMILY SSF52540 5 863 6.51E-110 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 Gene3D G3DSA:3.40.50.300 10 462 1.9E-147 T 12-10-2018 PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1011 1214 1.3E-6 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 Gene3D G3DSA:1.10.3170.10 160 367 1.9E-147 T 12-10-2018 PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 461 2.5E-57 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1237 0.0 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 Pfam PF13361 UvrD-like helicase C-terminal domain 469 671 2.5E-6 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 SUPERFAMILY SSF52980 942 1239 1.02E-71 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 Gene3D G3DSA:3.40.50.300 473 887 2.9E-149 T 12-10-2018 PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 Gene3D G3DSA:1.10.486.10 621 763 2.9E-149 T 12-10-2018 PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 Gene3D G3DSA:3.90.320.10 931 1244 8.1E-89 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal PA257_5345 7bf23139a4820f5caaff3a01704b6fd5 1245 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1238 21.737 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 PA257_4399 2727e108df55667e493feeae2e305574 540 Gene3D G3DSA:3.40.50.2300 416 531 1.1E-14 T 12-10-2018 PA257_4399 2727e108df55667e493feeae2e305574 540 SMART SM00387 288 399 5.6E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4399 2727e108df55667e493feeae2e305574 540 Gene3D G3DSA:1.10.287.130 160 242 1.0E-14 T 12-10-2018 PA257_4399 2727e108df55667e493feeae2e305574 540 Gene3D G3DSA:3.30.565.10 249 398 7.2E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4399 2727e108df55667e493feeae2e305574 540 SMART SM00388 179 244 1.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4399 2727e108df55667e493feeae2e305574 540 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 244 2.0E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4399 2727e108df55667e493feeae2e305574 540 SMART SM00448 419 526 2.5E-4 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4399 2727e108df55667e493feeae2e305574 540 SUPERFAMILY SSF47384 163 245 1.04E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4399 2727e108df55667e493feeae2e305574 540 Pfam PF00072 Response regulator receiver domain 421 526 3.0E-7 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4399 2727e108df55667e493feeae2e305574 540 SUPERFAMILY SSF55874 234 394 2.62E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4399 2727e108df55667e493feeae2e305574 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 394 9.1E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4399 2727e108df55667e493feeae2e305574 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 1.6E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4399 2727e108df55667e493feeae2e305574 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 1.6E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4399 2727e108df55667e493feeae2e305574 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 1.6E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4399 2727e108df55667e493feeae2e305574 540 SUPERFAMILY SSF52172 417 533 1.57E-15 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1672 e79b82bb1766551c7e3b60fffabcd88d 536 PIRSF PIRSF500060 12 532 2.4E-239 T 12-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria PA257_1672 e79b82bb1766551c7e3b60fffabcd88d 536 Gene3D G3DSA:3.20.20.70 148 503 6.0E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1672 e79b82bb1766551c7e3b60fffabcd88d 536 PIRSF PIRSF006429 8 535 3.4E-164 T 12-10-2018 IPR024188 Glutamate synthase large subunit-like protein PA257_1672 e79b82bb1766551c7e3b60fffabcd88d 536 Pfam PF01645 Conserved region in glutamate synthase 158 475 1.6E-81 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PA257_1672 e79b82bb1766551c7e3b60fffabcd88d 536 SUPERFAMILY SSF51395 6 502 8.37E-139 T 12-10-2018 PA257_0730 82d630343f0451bffb467118d42bb260 117 SUPERFAMILY SSF55620 2 115 1.72E-35 T 12-10-2018 PA257_0730 82d630343f0451bffb467118d42bb260 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 5.9E-25 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PA257_0730 82d630343f0451bffb467118d42bb260 117 SMART SM00905 4 114 1.2E-50 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PA257_0730 82d630343f0451bffb467118d42bb260 117 Gene3D G3DSA:3.30.1130.10 1 116 2.0E-40 T 12-10-2018 PA257_0730 82d630343f0451bffb467118d42bb260 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 5.1E-32 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PA257_0730 82d630343f0451bffb467118d42bb260 117 TIGRFAM TIGR00526 folB_dom: FolB domain 2 115 9.3E-32 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 229 241 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 152 164 4.3E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 52 61 4.3E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 124 138 4.3E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 112 124 4.3E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 242 252 4.3E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 174 186 4.3E-24 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 56 252 3.3E-88 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 181 196 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 Pfam PF00813 FliP family 56 248 3.6E-79 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 251 2.1E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 73 93 2.1E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 93 112 2.1E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 202 223 2.1E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 54 73 2.1E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4347 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 181 201 2.1E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_5645 e5d02746acfa77e2d8de8d15d9e6ce32 657 SMART SM00487 247 415 1.7E-14 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_5645 e5d02746acfa77e2d8de8d15d9e6ce32 657 SUPERFAMILY SSF52540 346 643 2.6E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5645 e5d02746acfa77e2d8de8d15d9e6ce32 657 Gene3D G3DSA:3.40.50.10810 228 463 4.9E-28 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PA257_5645 e5d02746acfa77e2d8de8d15d9e6ce32 657 Pfam PF00271 Helicase conserved C-terminal domain 495 604 9.0E-13 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_5645 e5d02746acfa77e2d8de8d15d9e6ce32 657 SMART SM00490 521 604 9.5E-13 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_5645 e5d02746acfa77e2d8de8d15d9e6ce32 657 Gene3D G3DSA:3.40.50.300 486 652 3.3E-44 T 12-10-2018 PA257_5645 e5d02746acfa77e2d8de8d15d9e6ce32 657 SUPERFAMILY SSF52540 246 440 9.81E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5645 e5d02746acfa77e2d8de8d15d9e6ce32 657 Pfam PF00176 SNF2 family N-terminal domain 267 469 7.4E-20 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 PA257_6381 243b940bcb913f901a3a2e4691526130 790 SUPERFAMILY SSF69349 449 632 3.53E-40 T 12-10-2018 PA257_6381 243b940bcb913f901a3a2e4691526130 790 SUPERFAMILY SSF69279 10 185 4.53E-54 T 12-10-2018 PA257_6381 243b940bcb913f901a3a2e4691526130 790 Pfam PF05954 Phage late control gene D protein (GPD) 29 327 4.5E-80 T 12-10-2018 PA257_6381 243b940bcb913f901a3a2e4691526130 790 Gene3D G3DSA:2.30.110.50 18 328 5.4E-89 T 12-10-2018 PA257_6381 243b940bcb913f901a3a2e4691526130 790 SUPERFAMILY SSF69255 371 459 1.8E-32 T 12-10-2018 PA257_6381 243b940bcb913f901a3a2e4691526130 790 Gene3D G3DSA:3.55.50.10 95 189 5.4E-89 T 12-10-2018 PA257_6381 243b940bcb913f901a3a2e4691526130 790 Gene3D G3DSA:2.40.50.230 362 464 3.6E-42 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_6381 243b940bcb913f901a3a2e4691526130 790 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 21 511 7.2E-118 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_6381 243b940bcb913f901a3a2e4691526130 790 Gene3D G3DSA:3.30.1920.30 222 284 5.4E-89 T 12-10-2018 PA257_6381 243b940bcb913f901a3a2e4691526130 790 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 529 6.0E-199 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_6381 243b940bcb913f901a3a2e4691526130 790 SUPERFAMILY SSF69279 192 371 8.16E-44 T 12-10-2018 PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 Gene3D G3DSA:2.20.25.90 3 64 9.5E-13 T 12-10-2018 PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 Pfam PF01568 Molydopterin dinucleotide binding domain 644 754 1.9E-16 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 Gene3D G3DSA:2.40.40.20 614 768 6.8E-20 T 12-10-2018 PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 SMART SM00926 6 59 1.3E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 425 442 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 SUPERFAMILY SSF50692 628 763 1.79E-24 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 SUPERFAMILY SSF53706 7 501 1.57E-112 T 12-10-2018 PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 Gene3D G3DSA:3.40.50.740 69 487 7.0E-84 T 12-10-2018 PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 Gene3D G3DSA:3.40.228.10 138 331 7.0E-84 T 12-10-2018 PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 58 3.5E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2833 575c0cc1a685f4ba5182cb5c3c3c0d6c 770 Pfam PF00384 Molybdopterin oxidoreductase 63 452 2.1E-35 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 SUPERFAMILY SSF50621 227 356 1.05E-46 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 SMART SM01005 233 357 1.7E-66 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.5E-60 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 Hamap MF_01201 Alanine racemase. 1 357 34.896 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 SUPERFAMILY SSF51419 8 234 2.62E-68 T 12-10-2018 IPR029066 PLP-binding barrel PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 Gene3D G3DSA:2.40.37.10 8 352 4.9E-119 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 Gene3D G3DSA:3.20.20.10 10 217 4.9E-119 T 12-10-2018 IPR029066 PLP-binding barrel PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 121 133 1.6E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 192 219 1.6E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 155 166 1.6E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 287 304 1.6E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 266 281 1.6E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 249 264 1.6E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 339 352 1.6E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 61 79 1.6E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 26 42 1.6E-62 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 TIGRFAM TIGR00492 alr: alanine racemase 4 356 3.1E-103 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6211 4e5926abf40833633a80c5d9a98169dd 363 Pfam PF00842 Alanine racemase, C-terminal domain 233 355 2.4E-41 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 Gene3D G3DSA:3.40.50.620 120 438 2.6E-148 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 SMART SM01016 6 92 7.5E-25 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 130 139 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 561 3.0E-117 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 Hamap MF_00123 Arginine--tRNA ligase [argS]. 6 561 23.866 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 Gene3D G3DSA:1.10.730.10 439 561 2.6E-148 T 12-10-2018 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 SUPERFAMILY SSF52374 115 454 2.33E-80 T 12-10-2018 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 Pfam PF05746 DALR anticodon binding domain 444 561 1.6E-34 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 Pfam PF00750 tRNA synthetases class I (R) 101 409 5.5E-20 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 SUPERFAMILY SSF47323 439 561 1.7E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 1.5E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 1.5E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 1.5E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 311 332 1.5E-21 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 SMART SM00836 444 561 2.5E-47 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 SUPERFAMILY SSF55190 5 112 2.09E-17 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 Gene3D G3DSA:3.30.1360.70 1 110 6.7E-20 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PA257_2603 11857afe8035ebb3c3667c98c8e6dd48 561 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 92 2.2E-16 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_4662 0050592d2534c4ce4a7ecabba4bd7744 393 Gene3D G3DSA:1.20.1090.10 197 392 3.9E-53 T 12-10-2018 PA257_4662 0050592d2534c4ce4a7ecabba4bd7744 393 Gene3D G3DSA:3.40.50.1970 2 195 2.6E-46 T 12-10-2018 PA257_4662 0050592d2534c4ce4a7ecabba4bd7744 393 SUPERFAMILY SSF56796 5 390 5.5E-104 T 12-10-2018 PA257_4662 0050592d2534c4ce4a7ecabba4bd7744 393 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 379 2.6E-109 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 PA257_4662 0050592d2534c4ce4a7ecabba4bd7744 393 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 184 212 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PA257_4211 beaf3ec6aca5e63fbb25190c4ab3162c 198 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 28 195 3.0E-93 T 12-10-2018 IPR009706 Protein of unknown function DUF1287 PA257_4211 beaf3ec6aca5e63fbb25190c4ab3162c 198 PIRSF PIRSF011444 3 198 1.1E-90 T 12-10-2018 IPR009706 Protein of unknown function DUF1287 PA257_4211 beaf3ec6aca5e63fbb25190c4ab3162c 198 Pfam PF06940 Domain of unknown function (DUF1287) 34 195 1.2E-66 T 12-10-2018 IPR009706 Protein of unknown function DUF1287 PA257_4526 5ceec8146b243e5dbbbd6b02170d9dd4 203 PIRSF PIRSF015617 6 203 3.0E-71 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 PA257_4526 5ceec8146b243e5dbbbd6b02170d9dd4 203 SUPERFAMILY SSF52540 12 203 1.53E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4526 5ceec8146b243e5dbbbd6b02170d9dd4 203 Gene3D G3DSA:3.40.50.300 11 203 3.7E-65 T 12-10-2018 PA257_4526 5ceec8146b243e5dbbbd6b02170d9dd4 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 203 6.1E-59 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 PA257_4526 5ceec8146b243e5dbbbd6b02170d9dd4 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 203 1.3E-68 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 PA257_4526 5ceec8146b243e5dbbbd6b02170d9dd4 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 1 26 1.6E-9 T 12-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 PA257_3400 d38d22ac8b3ca084dc4a0e56e957cd4e 410 Gene3D G3DSA:3.40.50.970 3 408 1.2E-125 T 12-10-2018 PA257_3400 d38d22ac8b3ca084dc4a0e56e957cd4e 410 SUPERFAMILY SSF52518 4 407 1.44E-96 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_3400 d38d22ac8b3ca084dc4a0e56e957cd4e 410 Pfam PF00676 Dehydrogenase E1 component 81 376 1.6E-98 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 PA257_3400 d38d22ac8b3ca084dc4a0e56e957cd4e 410 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 5 45 1.0E-20 T 12-10-2018 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 PA257_2437 9c985f03b344447c7b8829bf511a2e3b 668 SMART SM00460 396 467 3.2E-20 T 12-10-2018 IPR002931 Transglutaminase-like PA257_2437 9c985f03b344447c7b8829bf511a2e3b 668 Pfam PF11992 Domain of unknown function (DUF3488) 9 321 5.4E-109 T 12-10-2018 IPR021878 Protein of unknown function DUF3488 PA257_2437 9c985f03b344447c7b8829bf511a2e3b 668 Gene3D G3DSA:3.10.620.30 337 484 2.1E-22 T 12-10-2018 PA257_2437 9c985f03b344447c7b8829bf511a2e3b 668 Pfam PF01841 Transglutaminase-like superfamily 349 465 2.4E-23 T 12-10-2018 IPR002931 Transglutaminase-like PA257_2437 9c985f03b344447c7b8829bf511a2e3b 668 Pfam PF13559 Domain of unknown function (DUF4129) 581 642 5.1E-9 T 12-10-2018 IPR025403 Domain of unknown function DUF4129 PA257_2437 9c985f03b344447c7b8829bf511a2e3b 668 SUPERFAMILY SSF54001 270 600 3.22E-74 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_4436 dfb290a91045cbf40965e1c3594048e3 89 SUPERFAMILY SSF54285 4 89 1.57E-15 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PA257_4436 dfb290a91045cbf40965e1c3594048e3 89 Gene3D G3DSA:3.10.20.30 3 89 5.1E-17 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_4436 dfb290a91045cbf40965e1c3594048e3 89 Pfam PF02597 ThiS family 22 89 3.9E-7 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 PA257_1264 1c9a484b4795e194b7546760c98ed97e 169 Pfam PF08281 Sigma-70, region 4 111 163 3.9E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_1264 1c9a484b4795e194b7546760c98ed97e 169 SUPERFAMILY SSF88946 10 100 5.89E-15 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_1264 1c9a484b4795e194b7546760c98ed97e 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 162 1.3E-19 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_1264 1c9a484b4795e194b7546760c98ed97e 169 Gene3D G3DSA:1.10.10.10 90 164 5.2E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1264 1c9a484b4795e194b7546760c98ed97e 169 Gene3D G3DSA:1.10.1740.10 1 77 5.5E-11 T 12-10-2018 PA257_1264 1c9a484b4795e194b7546760c98ed97e 169 Pfam PF04542 Sigma-70 region 2 15 80 2.2E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_1264 1c9a484b4795e194b7546760c98ed97e 169 SUPERFAMILY SSF88659 105 164 1.26E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 85 105 4.2E-42 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 128 149 4.2E-42 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 23 43 4.2E-42 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 3 22 4.2E-42 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 106 126 4.2E-42 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 44 64 4.2E-42 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 PIRSF PIRSF002560 1 154 2.9E-63 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 3.1E-48 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 Gene3D G3DSA:1.20.1260.10 1 154 9.9E-68 T 12-10-2018 IPR012347 Ferritin-like PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 SUPERFAMILY SSF47240 1 154 1.74E-46 T 12-10-2018 IPR009078 Ferritin-like superfamily PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_0860 1bd2083a5bf30f99273964692f7c5415 154 Pfam PF00210 Ferritin-like domain 8 144 9.6E-38 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PA257_5165 a1ef6ac19b1bff8428a18e4191c28d1e 272 SUPERFAMILY SSF52096 18 271 1.4E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_5165 a1ef6ac19b1bff8428a18e4191c28d1e 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 27 270 7.8E-53 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_5165 a1ef6ac19b1bff8428a18e4191c28d1e 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 113 133 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PA257_5165 a1ef6ac19b1bff8428a18e4191c28d1e 272 Gene3D G3DSA:3.90.226.10 14 271 2.8E-81 T 12-10-2018 PA257_3081 1905d5de590325036619e50d6e5b8eee 304 SUPERFAMILY SSF53850 93 294 4.52E-37 T 12-10-2018 PA257_3081 1905d5de590325036619e50d6e5b8eee 304 Gene3D G3DSA:3.40.190.10 93 293 3.5E-49 T 12-10-2018 PA257_3081 1905d5de590325036619e50d6e5b8eee 304 Gene3D G3DSA:3.40.190.10 174 269 3.5E-49 T 12-10-2018 PA257_3081 1905d5de590325036619e50d6e5b8eee 304 Pfam PF03466 LysR substrate binding domain 101 293 1.0E-20 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3081 1905d5de590325036619e50d6e5b8eee 304 Gene3D G3DSA:1.10.10.10 2 91 4.0E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3081 1905d5de590325036619e50d6e5b8eee 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.2E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3081 1905d5de590325036619e50d6e5b8eee 304 SUPERFAMILY SSF46785 7 89 6.19E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3081 1905d5de590325036619e50d6e5b8eee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 9.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3081 1905d5de590325036619e50d6e5b8eee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 9.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3081 1905d5de590325036619e50d6e5b8eee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 9.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1261 d25e4618f67c4c4ec5510c654766e7a7 153 Gene3D G3DSA:3.40.1420.10 24 153 4.4E-52 T 12-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily PA257_1261 d25e4618f67c4c4ec5510c654766e7a7 153 SUPERFAMILY SSF89872 25 153 2.49E-51 T 12-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily PA257_1261 d25e4618f67c4c4ec5510c654766e7a7 153 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 36 151 1.9E-42 T 12-10-2018 PA257_1261 d25e4618f67c4c4ec5510c654766e7a7 153 PIRSF PIRSF009103 1 153 1.4E-62 T 12-10-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PA257_0250 9c263ba9305610c1af963b4093860452 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.8E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0250 9c263ba9305610c1af963b4093860452 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.8E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0250 9c263ba9305610c1af963b4093860452 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.8E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0250 9c263ba9305610c1af963b4093860452 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.8E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0250 9c263ba9305610c1af963b4093860452 293 SMART SM01130 4 293 5.5E-99 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0250 9c263ba9305610c1af963b4093860452 293 Pfam PF00701 Dihydrodipicolinate synthetase family 6 290 3.1E-55 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0250 9c263ba9305610c1af963b4093860452 293 PIRSF PIRSF001365 1 293 2.4E-86 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0250 9c263ba9305610c1af963b4093860452 293 Gene3D G3DSA:3.20.20.70 3 293 5.3E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0250 9c263ba9305610c1af963b4093860452 293 SUPERFAMILY SSF51569 3 292 2.09E-85 T 12-10-2018 PA257_5574 ae34f7130688f1a2845f1fafa59dd377 336 SUPERFAMILY SSF161098 89 319 1.37E-21 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5574 ae34f7130688f1a2845f1fafa59dd377 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 2.4E-47 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_6402 e667c0490c5852382d42fe560c367051 176 SUPERFAMILY SSF54593 9 167 3.49E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_6402 e667c0490c5852382d42fe560c367051 176 ProSitePatterns PS00935 Glyoxalase I signature 2. 109 125 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PA257_6402 e667c0490c5852382d42fe560c367051 176 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PA257_6402 e667c0490c5852382d42fe560c367051 176 Gene3D G3DSA:3.10.180.10 2 169 8.8E-62 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_6402 e667c0490c5852382d42fe560c367051 176 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 12 168 3.9E-51 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PA257_6402 e667c0490c5852382d42fe560c367051 176 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 164 1.4E-23 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_6318 6f258099e6aba92c699326a2620dae85 271 Gene3D G3DSA:3.40.50.620 132 270 2.7E-14 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_6318 6f258099e6aba92c699326a2620dae85 271 Gene3D G3DSA:3.40.50.620 1 131 9.8E-20 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_6318 6f258099e6aba92c699326a2620dae85 271 Pfam PF00582 Universal stress protein family 1 124 5.4E-21 T 12-10-2018 IPR006016 UspA PA257_6318 6f258099e6aba92c699326a2620dae85 271 Pfam PF00582 Universal stress protein family 133 270 1.1E-15 T 12-10-2018 IPR006016 UspA PA257_6318 6f258099e6aba92c699326a2620dae85 271 SUPERFAMILY SSF52402 133 269 9.21E-16 T 12-10-2018 PA257_6318 6f258099e6aba92c699326a2620dae85 271 PRINTS PR01438 Universal stress protein signature 231 243 1.2E-5 T 12-10-2018 IPR006015 Universal stress protein A PA257_6318 6f258099e6aba92c699326a2620dae85 271 PRINTS PR01438 Universal stress protein signature 133 151 1.2E-5 T 12-10-2018 IPR006015 Universal stress protein A PA257_6318 6f258099e6aba92c699326a2620dae85 271 PRINTS PR01438 Universal stress protein signature 249 271 1.2E-5 T 12-10-2018 IPR006015 Universal stress protein A PA257_6318 6f258099e6aba92c699326a2620dae85 271 SUPERFAMILY SSF52402 1 124 1.09E-22 T 12-10-2018 PA257_0299 3e5e6add9941991f3d9fff1a53d37dd3 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 42 55 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_0299 3e5e6add9941991f3d9fff1a53d37dd3 283 SUPERFAMILY SSF51717 3 269 3.14E-67 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_0299 3e5e6add9941991f3d9fff1a53d37dd3 283 Pfam PF00809 Pterin binding enzyme 9 252 2.7E-69 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_0299 3e5e6add9941991f3d9fff1a53d37dd3 283 Gene3D G3DSA:3.20.20.20 1 274 4.7E-68 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_0299 3e5e6add9941991f3d9fff1a53d37dd3 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 8 266 5.1E-82 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 PA257_0299 3e5e6add9941991f3d9fff1a53d37dd3 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 8 23 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5253 3e5e6add9941991f3d9fff1a53d37dd3 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 42 55 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5253 3e5e6add9941991f3d9fff1a53d37dd3 283 SUPERFAMILY SSF51717 3 269 3.14E-67 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5253 3e5e6add9941991f3d9fff1a53d37dd3 283 Pfam PF00809 Pterin binding enzyme 9 252 2.7E-69 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5253 3e5e6add9941991f3d9fff1a53d37dd3 283 Gene3D G3DSA:3.20.20.20 1 274 4.7E-68 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5253 3e5e6add9941991f3d9fff1a53d37dd3 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 8 266 5.1E-82 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 PA257_5253 3e5e6add9941991f3d9fff1a53d37dd3 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 8 23 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_6852 85d010fb479e34b496b58f4759483e47 323 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 319 2.3E-127 T 12-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 PA257_6852 85d010fb479e34b496b58f4759483e47 323 SUPERFAMILY SSF51735 3 319 9.68E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6852 85d010fb479e34b496b58f4759483e47 323 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 312 2.5E-122 T 12-10-2018 IPR016040 NAD(P)-binding domain PA257_6852 85d010fb479e34b496b58f4759483e47 323 Gene3D G3DSA:3.90.25.10 186 317 8.2E-136 T 12-10-2018 PA257_6852 85d010fb479e34b496b58f4759483e47 323 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 322 53.111 T 12-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 PA257_6852 85d010fb479e34b496b58f4759483e47 323 Gene3D G3DSA:3.40.50.720 5 303 8.2E-136 T 12-10-2018 PA257_1934 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 SUPERFAMILY SSF46785 9 142 2.55E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1934 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 SMART SM00347 26 127 5.5E-23 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1934 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 Pfam PF12802 MarR family 31 91 1.1E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1934 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 6.3E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1934 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 6.3E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1934 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 6.3E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1934 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 6.3E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1934 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PA257_1934 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 Gene3D G3DSA:1.10.10.10 1 144 9.0E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4714 375055ea9080dde4b51e8f1662876d14 109 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 109 18.671 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PA257_4714 375055ea9080dde4b51e8f1662876d14 109 Pfam PF02049 Flagellar hook-basal body complex protein FliE 24 109 8.9E-32 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PA257_4714 375055ea9080dde4b51e8f1662876d14 109 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 19 108 8.9E-27 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PA257_4714 375055ea9080dde4b51e8f1662876d14 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 73 89 8.2E-20 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PA257_4714 375055ea9080dde4b51e8f1662876d14 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 94 107 8.2E-20 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PA257_4714 375055ea9080dde4b51e8f1662876d14 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 38 54 8.2E-20 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PA257_0204 4b9ff941a12f8c0834959ed2add950d4 161 SUPERFAMILY SSF50341 13 153 1.07E-39 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_0204 4b9ff941a12f8c0834959ed2add950d4 161 Gene3D G3DSA:2.30.30.40 17 142 1.2E-39 T 12-10-2018 PA257_0204 4b9ff941a12f8c0834959ed2add950d4 161 Pfam PF01584 CheW-like domain 15 151 2.0E-35 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_0204 4b9ff941a12f8c0834959ed2add950d4 161 Gene3D G3DSA:2.40.50.180 34 143 1.2E-39 T 12-10-2018 PA257_0204 4b9ff941a12f8c0834959ed2add950d4 161 SMART SM00260 11 148 1.5E-41 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 806 101.028 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 SMART SM00387 33 177 2.5E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 Gene3D G3DSA:3.10.20.690 594 685 1.6E-19 T 12-10-2018 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR00418 DNA topoisomerase II family signature 72 85 9.7E-72 T 12-10-2018 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR00418 DNA topoisomerase II family signature 489 505 9.7E-72 T 12-10-2018 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR00418 DNA topoisomerase II family signature 527 539 9.7E-72 T 12-10-2018 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR00418 DNA topoisomerase II family signature 115 129 9.7E-72 T 12-10-2018 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR00418 DNA topoisomerase II family signature 270 283 9.7E-72 T 12-10-2018 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR00418 DNA topoisomerase II family signature 738 754 9.7E-72 T 12-10-2018 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR00418 DNA topoisomerase II family signature 422 436 9.7E-72 T 12-10-2018 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR00418 DNA topoisomerase II family signature 37 52 9.7E-72 T 12-10-2018 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR00418 DNA topoisomerase II family signature 507 524 9.7E-72 T 12-10-2018 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 SMART SM00433 37 799 6.0E-270 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 SUPERFAMILY SSF56719 396 796 1.15E-87 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 175 1.6E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 SUPERFAMILY SSF54211 222 394 2.85E-57 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 Pfam PF00204 DNA gyrase B 222 392 6.5E-57 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 Gene3D G3DSA:3.40.50.670 398 586 1.7E-73 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 SUPERFAMILY SSF55874 7 219 5.24E-75 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 806 1.6E-302 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 314 330 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 197 210 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 221 243 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 182 197 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 362 376 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 759 771 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 775 791 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 244 262 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 376 396 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 7 17 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 PRINTS PR01159 DNA gyrase subunit B signature 472 481 1.8E-83 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 Pfam PF01751 Toprim domain 421 533 3.1E-17 T 12-10-2018 IPR006171 TOPRIM domain PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 Gene3D G3DSA:3.40.50.670 706 805 2.7E-26 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 Gene3D G3DSA:3.30.565.10 3 220 2.6E-92 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 795 2.8E-30 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 Gene3D G3DSA:3.30.230.10 221 397 1.6E-68 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_0004 47544f7aacb6831282ec3b39d1c8fa34 806 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_3821 1ffc6dd159d7f7a70569e8e11a24c333 269 Gene3D G3DSA:3.40.50.150 9 265 5.9E-28 T 12-10-2018 PA257_3821 1ffc6dd159d7f7a70569e8e11a24c333 269 SUPERFAMILY SSF53335 9 202 2.28E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3821 1ffc6dd159d7f7a70569e8e11a24c333 269 Pfam PF13649 Methyltransferase domain 49 155 3.7E-9 T 12-10-2018 PA257_4313 327b7cf53491387287d7ed280d7ac94c 180 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 171 6.1E-57 T 12-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 PA257_4313 327b7cf53491387287d7ed280d7ac94c 180 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PA257_4313 327b7cf53491387287d7ed280d7ac94c 180 Pfam PF08534 Redoxin 37 160 1.6E-20 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 PA257_4313 327b7cf53491387287d7ed280d7ac94c 180 SUPERFAMILY SSF52833 41 173 5.27E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4313 327b7cf53491387287d7ed280d7ac94c 180 Gene3D G3DSA:3.40.30.10 24 180 1.0E-50 T 12-10-2018 PA257_5802 8fbb6e4670e1e00235a61933a6c2ee15 415 PIRSF PIRSF000018 1 415 1.4E-147 T 12-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 PA257_5802 8fbb6e4670e1e00235a61933a6c2ee15 415 Pfam PF00034 Cytochrome c 31 129 1.1E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_5802 8fbb6e4670e1e00235a61933a6c2ee15 415 SUPERFAMILY SSF46626 176 289 2.16E-14 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5802 8fbb6e4670e1e00235a61933a6c2ee15 415 SUPERFAMILY SSF46626 300 403 3.84E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5802 8fbb6e4670e1e00235a61933a6c2ee15 415 Gene3D G3DSA:1.10.760.10 284 414 1.3E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5802 8fbb6e4670e1e00235a61933a6c2ee15 415 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 300 383 1.2E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_5802 8fbb6e4670e1e00235a61933a6c2ee15 415 Gene3D G3DSA:1.10.760.10 3 136 4.8E-12 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5802 8fbb6e4670e1e00235a61933a6c2ee15 415 PRINTS PR00605 Class IC cytochrome C signature 308 319 1.3E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PA257_5802 8fbb6e4670e1e00235a61933a6c2ee15 415 PRINTS PR00605 Class IC cytochrome C signature 361 383 1.3E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PA257_5802 8fbb6e4670e1e00235a61933a6c2ee15 415 SUPERFAMILY SSF46626 17 152 3.81E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.413 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 Pfam PF01726 LexA DNA binding domain 1 65 1.9E-31 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 Gene3D G3DSA:2.10.109.10 86 204 5.5E-43 T 12-10-2018 PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 Pfam PF00717 Peptidase S24-like 120 186 1.0E-14 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 6.5E-75 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 1.9E-12 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 1.9E-12 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 1.9E-12 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 SUPERFAMILY SSF46785 3 70 1.7E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 Gene3D G3DSA:1.10.10.10 1 69 2.0E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2296 f2ebaeb68fa7576cf01473b7f957f178 204 SUPERFAMILY SSF51306 82 203 6.8E-36 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_4716 05096468999a7f6063f278ad355d735b 402 SUPERFAMILY SSF55874 251 394 1.31E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4716 05096468999a7f6063f278ad355d735b 402 Gene3D G3DSA:3.30.450.20 60 164 3.8E-6 T 12-10-2018 PA257_4716 05096468999a7f6063f278ad355d735b 402 SMART SM00091 75 138 3.2E-7 T 12-10-2018 IPR000014 PAS domain PA257_4716 05096468999a7f6063f278ad355d735b 402 Gene3D G3DSA:1.10.287.130 166 244 2.6E-15 T 12-10-2018 PA257_4716 05096468999a7f6063f278ad355d735b 402 SMART SM00388 181 247 3.0E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4716 05096468999a7f6063f278ad355d735b 402 Pfam PF13188 PAS domain 76 130 3.4E-7 T 12-10-2018 IPR000014 PAS domain PA257_4716 05096468999a7f6063f278ad355d735b 402 SUPERFAMILY SSF55785 75 153 4.01E-10 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4716 05096468999a7f6063f278ad355d735b 402 SMART SM00387 287 393 3.8E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4716 05096468999a7f6063f278ad355d735b 402 Pfam PF00512 His Kinase A (phospho-acceptor) domain 181 245 4.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4716 05096468999a7f6063f278ad355d735b 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 371 1.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4716 05096468999a7f6063f278ad355d735b 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 1.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4716 05096468999a7f6063f278ad355d735b 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 1.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4716 05096468999a7f6063f278ad355d735b 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 390 1.5E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4716 05096468999a7f6063f278ad355d735b 402 SUPERFAMILY SSF47384 175 245 2.75E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4716 05096468999a7f6063f278ad355d735b 402 Gene3D G3DSA:3.30.565.10 255 394 2.1E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4716 05096468999a7f6063f278ad355d735b 402 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 391 6.0E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4342 c3bb2fe092674b592f9496f3dc643cb0 438 Pfam PF04536 TPM domain 67 189 1.6E-37 T 12-10-2018 IPR007621 TPM domain PA257_4342 c3bb2fe092674b592f9496f3dc643cb0 438 Gene3D G3DSA:3.10.310.50 55 197 1.1E-48 T 12-10-2018 PA257_5326 73765191769911fab100326d68239143 213 SUPERFAMILY SSF54523 55 208 1.41E-8 T 12-10-2018 PA257_5326 73765191769911fab100326d68239143 213 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5326 73765191769911fab100326d68239143 213 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 3.5E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5326 73765191769911fab100326d68239143 213 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 36 1.3E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5326 73765191769911fab100326d68239143 213 SUPERFAMILY SSF54523 17 71 1.8E-5 T 12-10-2018 PA257_4719 5bd967091d9569bf476b55d95aa0c89d 123 TIGRFAM TIGR00208 fliS: flagellar protein FliS 3 120 3.3E-27 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 PA257_4719 5bd967091d9569bf476b55d95aa0c89d 123 SUPERFAMILY SSF101116 5 121 5.62E-39 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 PA257_4719 5bd967091d9569bf476b55d95aa0c89d 123 Gene3D G3DSA:1.20.120.340 1 123 1.5E-41 T 12-10-2018 PA257_4719 5bd967091d9569bf476b55d95aa0c89d 123 PIRSF PIRSF039090 1 123 4.7E-43 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 PA257_4719 5bd967091d9569bf476b55d95aa0c89d 123 Pfam PF02561 Flagellar protein FliS 5 121 8.9E-38 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 SMART SM00433 33 623 1.4E-207 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 SMART SM00387 26 172 8.6E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 SUPERFAMILY SSF56719 387 620 7.59E-76 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 191 212 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 148 163 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 134 148 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 237 260 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 25 38 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 173 190 1.3E-116 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 6.2E-24 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 SUPERFAMILY SSF55874 4 214 1.69E-68 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 623 0.0 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 627 46.883 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 Gene3D G3DSA:3.30.230.10 215 388 1.1E-53 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 Gene3D G3DSA:3.40.50.670 389 622 3.6E-86 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF01751 Toprim domain 412 521 7.5E-13 T 12-10-2018 IPR006171 TOPRIM domain PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF00204 DNA gyrase B 217 384 1.4E-38 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 Gene3D G3DSA:3.30.565.10 1 214 2.5E-77 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 170 4.0E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 SUPERFAMILY SSF54211 216 381 6.83E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 7.4E-59 T 12-10-2018 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 7.4E-59 T 12-10-2018 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 7.4E-59 T 12-10-2018 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 7.4E-59 T 12-10-2018 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 30 45 7.4E-59 T 12-10-2018 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 108 122 7.4E-59 T 12-10-2018 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 7.4E-59 T 12-10-2018 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 65 78 7.4E-59 T 12-10-2018 PA257_6250 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 7.4E-59 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 666 836 6.28E-10 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.70.1430 40 802 4.4E-298 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.70.1320 135 326 4.4E-298 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 40 133 6.02E-24 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.2090.10 706 794 4.4E-298 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:1.20.1640.10 504 1010 4.4E-298 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82866 290 490 2.22E-48 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82714 183 266 3.27E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-78 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.0E-78 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 1.0E-78 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.0E-78 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-78 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.0E-78 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.0E-78 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.0E-78 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.0E-78 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.2090.10 179 269 4.4E-298 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82714 708 791 3.14E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 556 653 3.4E-16 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 136 324 1.07E-24 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82866 816 1015 3.79E-44 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 Pfam PF00873 AcrB/AcrD/AcrF family 6 1013 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.70.1440 654 852 4.4E-298 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:1.20.1640.10 10 503 4.4E-298 T 12-10-2018 PA257_3043 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.70.1430 558 653 4.4E-298 T 12-10-2018 PA257_4039 ae939ccde6b9b2fa955444aa7c084380 295 Pfam PF03547 Membrane transport protein 134 285 2.5E-14 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 PIRSF PIRSF006809 5 422 1.9E-149 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 Pfam PF01926 50S ribosome-binding GTPase 201 319 2.7E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 3.2E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 3.2E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 3.2E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 SUPERFAMILY SSF54980 370 420 4.24E-8 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 2.3E-29 T 12-10-2018 IPR032305 GTP-binding protein, middle domain PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 Pfam PF13167 GTP-binding GTPase N-terminal 28 113 2.6E-31 T 12-10-2018 IPR025121 GTPase HflX, N-terminal PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 Hamap MF_00900 GTPase HflX [hflX]. 28 391 47.977 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 361 4.2E-155 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 SUPERFAMILY SSF52540 199 374 4.94E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 Gene3D G3DSA:3.40.50.11060 19 139 7.2E-39 T 12-10-2018 PA257_6226 430dedb91f9794190d9d233a6d743ce1 433 Gene3D G3DSA:3.40.50.300 198 365 6.4E-41 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 Pfam PF00122 E1-E2 ATPase 310 487 1.0E-47 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 Gene3D G3DSA:2.70.150.20 304 415 1.4E-30 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 SUPERFAMILY SSF55008 87 164 6.68E-17 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 SUPERFAMILY SSF81665 262 501 4.84E-8 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 SUPERFAMILY SSF81653 323 409 3.4E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 231 796 3.4E-139 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 Pfam PF00403 Heavy-metal-associated domain 97 156 1.1E-8 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 796 3.1E-154 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 284 772 9.2E-68 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 Gene3D G3DSA:3.40.1110.10 519 626 5.4E-64 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 7 89 5.4E-28 T 12-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 Gene3D G3DSA:3.30.70.100 88 159 6.8E-12 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 Gene3D G3DSA:3.40.50.1000 489 746 5.4E-64 T 12-10-2018 IPR023214 HAD superfamily PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 ProSitePatterns PS01229 Hypothetical cof family signature 2. 694 716 - T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 PRINTS PR00941 Cadmium-transporting ATPase signature 97 106 4.7E-5 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 PRINTS PR00941 Cadmium-transporting ATPase signature 376 392 4.7E-5 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 PRINTS PR00941 Cadmium-transporting ATPase signature 108 129 4.7E-5 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 SUPERFAMILY SSF56784 506 794 3.17E-50 T 12-10-2018 IPR036412 HAD-like superfamily PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 651 5.0E-21 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 729 5.0E-21 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 694 713 5.0E-21 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 522 5.0E-21 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 360 374 5.0E-21 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 708 7.7E-33 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 276 797 5.3E-113 T 12-10-2018 PA257_4239 05adf85742c496aa0a3adf4a48d162fb 811 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 510 516 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PA257_0660 420240ec00edc87f928f95fbdb8e3425 568 Gene3D G3DSA:1.10.760.10 44 142 1.1E-37 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0660 420240ec00edc87f928f95fbdb8e3425 568 Pfam PF02239 Cytochrome D1 heme domain 171 563 4.4E-167 T 12-10-2018 PA257_0660 420240ec00edc87f928f95fbdb8e3425 568 SUPERFAMILY SSF46626 36 159 5.3E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0660 420240ec00edc87f928f95fbdb8e3425 568 SUPERFAMILY SSF51004 143 568 1.57E-128 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily PA257_0660 420240ec00edc87f928f95fbdb8e3425 568 Gene3D G3DSA:2.140.10.20 143 568 3.6E-208 T 12-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily PA257_0660 420240ec00edc87f928f95fbdb8e3425 568 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 62 134 6.2E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4006 4b572ebd887d4e43507177d405708550 327 Pfam PF14397 Sugar-transfer associated ATP-grasp 20 293 3.3E-103 T 12-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PA257_4006 4b572ebd887d4e43507177d405708550 327 SUPERFAMILY SSF56059 40 279 5.5E-19 T 12-10-2018 PA257_4006 4b572ebd887d4e43507177d405708550 327 Gene3D G3DSA:3.30.1490.20 40 128 4.8E-5 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_4006 4b572ebd887d4e43507177d405708550 327 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 4 323 6.8E-170 T 12-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein PA257_6765 63f41b237f993ff435f964faffe0973c 134 Pfam PF03061 Thioesterase superfamily 29 103 1.0E-15 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_6765 63f41b237f993ff435f964faffe0973c 134 Gene3D G3DSA:3.10.129.10 3 133 1.4E-34 T 12-10-2018 PA257_6765 63f41b237f993ff435f964faffe0973c 134 SUPERFAMILY SSF54637 9 131 3.58E-32 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_0573 890cb96d71ae0e8a56d370c432e62b13 206 Gene3D G3DSA:1.10.10.60 5 63 1.5E-17 T 12-10-2018 PA257_0573 890cb96d71ae0e8a56d370c432e62b13 206 Gene3D G3DSA:1.10.357.10 65 203 1.8E-43 T 12-10-2018 PA257_0573 890cb96d71ae0e8a56d370c432e62b13 206 SUPERFAMILY SSF48498 81 204 3.48E-36 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_0573 890cb96d71ae0e8a56d370c432e62b13 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 2.3E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0573 890cb96d71ae0e8a56d370c432e62b13 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.4E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0573 890cb96d71ae0e8a56d370c432e62b13 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.4E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0573 890cb96d71ae0e8a56d370c432e62b13 206 Pfam PF08362 YcdC-like protein, C-terminal region 65 204 2.6E-54 T 12-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PA257_0573 890cb96d71ae0e8a56d370c432e62b13 206 SUPERFAMILY SSF46689 7 73 1.59E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5611 7d5954ee95faf60c6e93791c24435f47 56 Pfam PF11293 Protein of unknown function (DUF3094) 2 56 1.6E-35 T 12-10-2018 IPR021444 Protein of unknown function DUF3094 PA257_1749 d0fceecc402d9ecf3643ad058dc0141b 702 SUPERFAMILY SSF53706 6 621 9.95E-126 T 12-10-2018 PA257_1749 d0fceecc402d9ecf3643ad058dc0141b 702 Gene3D G3DSA:2.20.25.90 2 67 2.6E-10 T 12-10-2018 PA257_1749 d0fceecc402d9ecf3643ad058dc0141b 702 Pfam PF00384 Molybdopterin oxidoreductase 65 482 6.2E-35 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_1749 d0fceecc402d9ecf3643ad058dc0141b 702 Gene3D G3DSA:3.40.228.10 140 336 5.0E-99 T 12-10-2018 PA257_1749 d0fceecc402d9ecf3643ad058dc0141b 702 Gene3D G3DSA:2.40.40.20 556 702 1.8E-25 T 12-10-2018 PA257_1749 d0fceecc402d9ecf3643ad058dc0141b 702 Gene3D G3DSA:3.40.50.740 73 484 5.0E-99 T 12-10-2018 PA257_1749 d0fceecc402d9ecf3643ad058dc0141b 702 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 9 58 2.6E-5 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_1749 d0fceecc402d9ecf3643ad058dc0141b 702 Pfam PF01568 Molydopterin dinucleotide binding domain 576 694 1.1E-25 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PA257_1749 d0fceecc402d9ecf3643ad058dc0141b 702 SMART SM00926 3 62 4.4E-9 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_6891 77c3714c4a665e591ae54f4b801555ad 196 SUPERFAMILY SSF46626 100 195 5.24E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6891 77c3714c4a665e591ae54f4b801555ad 196 PIRSF PIRSF000005 1 196 1.4E-61 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 PA257_6891 77c3714c4a665e591ae54f4b801555ad 196 Gene3D G3DSA:1.10.760.10 16 97 9.5E-25 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6891 77c3714c4a665e591ae54f4b801555ad 196 SUPERFAMILY SSF46626 8 94 1.58E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6891 77c3714c4a665e591ae54f4b801555ad 196 Gene3D G3DSA:1.10.760.10 98 196 4.6E-29 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6891 77c3714c4a665e591ae54f4b801555ad 196 Pfam PF00034 Cytochrome c 107 194 1.2E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_6891 77c3714c4a665e591ae54f4b801555ad 196 Pfam PF00034 Cytochrome c 22 95 1.0E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_1577 2fb60058c7ebe8acf0b077ae3a64e0a1 258 SUPERFAMILY SSF51161 3 258 3.83E-77 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_1577 2fb60058c7ebe8acf0b077ae3a64e0a1 258 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 256 1.9E-95 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 PA257_1577 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 258 45.218 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 PA257_1577 2fb60058c7ebe8acf0b077ae3a64e0a1 258 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 4 32 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PA257_1577 2fb60058c7ebe8acf0b077ae3a64e0a1 258 PIRSF PIRSF000456 1 258 1.4E-99 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 PA257_1577 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Gene3D G3DSA:1.20.1180.10 193 258 1.3E-26 T 12-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 PA257_1577 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Gene3D G3DSA:2.160.10.10 1 192 2.3E-56 T 12-10-2018 PA257_1577 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 256 4.2E-27 T 12-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 PA257_1577 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 137 1.5E-8 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_1577 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 32 65 6.3E-6 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_0138 159dc8893e0e19c3834d83319bea9956 150 Gene3D G3DSA:3.40.630.30 1 150 6.6E-47 T 12-10-2018 PA257_0138 159dc8893e0e19c3834d83319bea9956 150 SUPERFAMILY SSF55729 3 149 1.89E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_0138 159dc8893e0e19c3834d83319bea9956 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 3.2E-15 T 12-10-2018 IPR000182 GNAT domain PA257_3367 fb328da57f8d23cb79413349d7028981 116 SUPERFAMILY SSF46785 3 83 6.18E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3367 fb328da57f8d23cb79413349d7028981 116 Pfam PF01022 Bacterial regulatory protein, arsR family 13 58 1.4E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_3367 fb328da57f8d23cb79413349d7028981 116 Gene3D G3DSA:1.10.10.10 2 90 3.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3367 fb328da57f8d23cb79413349d7028981 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 8.5E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_3367 fb328da57f8d23cb79413349d7028981 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 8.5E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_3367 fb328da57f8d23cb79413349d7028981 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 8.5E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_3367 fb328da57f8d23cb79413349d7028981 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 8.5E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_3367 fb328da57f8d23cb79413349d7028981 116 SMART SM00418 6 84 2.5E-29 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 SUPERFAMILY SSF52440 3 115 7.19E-51 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_2419 b2b6cb1c28807d926a503713f757553a 661 SUPERFAMILY SSF51246 333 447 1.36E-36 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 Pfam PF00364 Biotin-requiring enzyme 591 656 1.9E-13 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_2419 b2b6cb1c28807d926a503713f757553a 661 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 324 1.0E-71 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 Gene3D G3DSA:2.40.50.100 591 660 9.8E-21 T 12-10-2018 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 Gene3D G3DSA:3.30.470.130 1 449 1.7E-197 T 12-10-2018 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 9.9E-47 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 614 631 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 SMART SM00878 338 444 4.3E-51 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 SUPERFAMILY SSF56059 85 347 3.01E-68 T 12-10-2018 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 Pfam PF02785 Biotin carboxylase C-terminal domain 338 444 1.3E-32 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_2419 b2b6cb1c28807d926a503713f757553a 661 SUPERFAMILY SSF51230 585 658 1.96E-19 T 12-10-2018 IPR011053 Single hybrid motif PA257_2746 f4a3128ee0d84a634372ca7b0d60a33b 185 Pfam PF11188 Protein of unknown function (DUF2975) 71 181 1.6E-10 T 12-10-2018 IPR021354 Protein of unknown function DUF2975 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF47226 433 556 1.94E-14 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:1.20.120.160 1673 1804 1.0E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:1.20.120.160 14 127 2.8E-6 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Pfam PF01584 CheW-like domain 2185 2324 9.0E-23 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:2.30.30.40 2180 2317 1.2E-34 T 12-10-2018 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:3.40.50.12740 2355 2476 1.1E-38 T 12-10-2018 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 2043 2179 5.9E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:1.20.120.160 1181 1283 2.2E-6 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SMART SM00073 1360 1457 6.6E-7 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SMART SM00073 1526 1623 0.011 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SMART SM00073 1039 1134 0.51 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SMART SM00073 1673 1770 6.4E-4 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SMART SM00073 862 959 1.6E-6 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF52172 2354 2473 3.98E-36 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SMART SM00387 2039 2180 1.1E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Pfam PF01627 Hpt domain 1041 1127 3.5E-11 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Pfam PF01627 Hpt domain 1362 1455 4.6E-14 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Pfam PF01627 Hpt domain 10 98 2.8E-8 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Pfam PF01627 Hpt domain 864 951 8.6E-14 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Pfam PF01627 Hpt domain 1528 1627 3.5E-14 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Pfam PF01627 Hpt domain 1675 1768 3.7E-15 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Pfam PF00072 Response regulator receiver domain 2357 2469 1.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SMART SM01231 1855 1994 1.3E-11 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF47226 1526 1648 1.28E-26 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:1.20.120.160 861 995 1.6E-25 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF50341 2179 2318 1.7E-21 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF47226 1039 1162 2.88E-19 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF47226 7 130 1.96E-23 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF55874 1996 2177 6.81E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2140 2158 1.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2084 2098 1.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2164 2177 1.5E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SMART SM00448 2355 2468 2.9E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:3.30.565.10 1993 2179 6.2E-53 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:2.40.50.180 2203 2277 1.2E-34 T 12-10-2018 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF47226 1360 1482 7.07E-28 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:1.20.120.160 1017 1131 2.7E-16 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SMART SM00260 2172 2322 2.0E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF47226 1674 1782 4.06E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF47226 1182 1302 3.83E-14 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 SUPERFAMILY SSF47226 862 987 7.33E-27 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:1.20.120.160 1518 1653 1.8E-24 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0548 805e4331ec249ee2617493e43c7f3666 2476 Gene3D G3DSA:1.20.120.160 1356 1485 8.1E-26 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_2225 132dc319853087e4bb9fa36c481b13ba 223 Pfam PF00072 Response regulator receiver domain 5 114 3.6E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2225 132dc319853087e4bb9fa36c481b13ba 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.9E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_2225 132dc319853087e4bb9fa36c481b13ba 223 SMART SM00448 3 114 3.1E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2225 132dc319853087e4bb9fa36c481b13ba 223 SUPERFAMILY SSF52172 3 180 6.83E-40 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2225 132dc319853087e4bb9fa36c481b13ba 223 Gene3D G3DSA:1.10.10.10 121 223 7.8E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2225 132dc319853087e4bb9fa36c481b13ba 223 Gene3D G3DSA:3.40.50.2300 1 120 8.2E-36 T 12-10-2018 PA257_2225 132dc319853087e4bb9fa36c481b13ba 223 SMART SM00862 146 220 6.7E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_0228 c0e361636bba751e46ca79bb2088e2a7 239 Pfam PF01618 MotA/TolQ/ExbB proton channel family 72 199 1.7E-37 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 3.2E-16 T 12-10-2018 PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 SMART SM00344 1 107 1.7E-32 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 SUPERFAMILY SSF46785 1 60 3.38E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 Gene3D G3DSA:1.10.10.10 2 51 2.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 SUPERFAMILY SSF54909 63 136 8.04E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 Pfam PF01037 Lrp/AsnC ligand binding domain 68 134 3.7E-12 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PA257_6004 7ced6e8c1996517e633dd182cd8b56a5 155 Gene3D G3DSA:3.30.70.920 52 136 1.2E-20 T 12-10-2018 PA257_0903 f6ab9b5e47933d5310cefca35af980e5 303 SUPERFAMILY SSF51569 2 289 7.64E-84 T 12-10-2018 PA257_0903 f6ab9b5e47933d5310cefca35af980e5 303 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.2E-55 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0903 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 8.6E-15 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0903 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 8.6E-15 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0903 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 8.6E-15 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0903 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 8.6E-15 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0903 f6ab9b5e47933d5310cefca35af980e5 303 Gene3D G3DSA:3.20.20.70 1 292 7.1E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0903 f6ab9b5e47933d5310cefca35af980e5 303 SMART SM01130 2 290 1.9E-90 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_0903 f6ab9b5e47933d5310cefca35af980e5 303 PIRSF PIRSF001365 1 299 1.3E-80 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_1660 31b87bb53447e3901f1988408f95020b 467 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 397 459 2.7E-16 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain PA257_1660 31b87bb53447e3901f1988408f95020b 467 SUPERFAMILY SSF56281 3 467 2.17E-130 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_1660 31b87bb53447e3901f1988408f95020b 467 Pfam PF00753 Metallo-beta-lactamase superfamily 13 227 6.6E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_1660 31b87bb53447e3901f1988408f95020b 467 Pfam PF10996 Beta-Casp domain 255 383 8.5E-26 T 12-10-2018 IPR022712 Beta-Casp domain PA257_1660 31b87bb53447e3901f1988408f95020b 467 SMART SM01027 255 383 2.6E-56 T 12-10-2018 IPR022712 Beta-Casp domain PA257_1660 31b87bb53447e3901f1988408f95020b 467 SMART SM00849 14 250 2.1E-25 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_1660 31b87bb53447e3901f1988408f95020b 467 Gene3D G3DSA:3.60.15.10 7 443 8.0E-143 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_1660 31b87bb53447e3901f1988408f95020b 467 Gene3D G3DSA:3.40.50.10890 223 409 8.0E-143 T 12-10-2018 PA257_0824 3c65321985d4b2f3d82277a932b27a0a 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 95 2.0E-13 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0824 3c65321985d4b2f3d82277a932b27a0a 122 Gene3D G3DSA:1.20.5.710 2 51 2.3E-24 T 12-10-2018 PA257_0824 3c65321985d4b2f3d82277a932b27a0a 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 2.9E-29 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0824 3c65321985d4b2f3d82277a932b27a0a 122 Gene3D G3DSA:3.30.1390.10 52 122 1.5E-29 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PA257_0824 3c65321985d4b2f3d82277a932b27a0a 122 SUPERFAMILY SSF48300 4 58 2.22E-15 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0824 3c65321985d4b2f3d82277a932b27a0a 122 SUPERFAMILY SSF54736 51 122 2.62E-24 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PA257_0824 3c65321985d4b2f3d82277a932b27a0a 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.996 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0824 3c65321985d4b2f3d82277a932b27a0a 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.3E-45 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0824 3c65321985d4b2f3d82277a932b27a0a 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 2.5E-17 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_3501 f1b16b265d4c5907cbeb67ddeffa3d0b 552 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 177 202 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site PA257_3501 f1b16b265d4c5907cbeb67ddeffa3d0b 552 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 62 471 1.1E-58 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 PA257_3501 f1b16b265d4c5907cbeb67ddeffa3d0b 552 Gene3D G3DSA:1.20.1730.10 50 547 4.7E-58 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily PA257_3501 f1b16b265d4c5907cbeb67ddeffa3d0b 552 Pfam PF00474 Sodium:solute symporter family 62 471 6.9E-103 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 PA257_2802 9b683c4717ddf2f13ced5e382f6c7249 64 Gene3D G3DSA:2.40.50.530 4 61 5.2E-17 T 12-10-2018 PA257_2802 9b683c4717ddf2f13ced5e382f6c7249 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_2802 9b683c4717ddf2f13ced5e382f6c7249 64 SUPERFAMILY SSF143034 2 61 6.67E-20 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2802 9b683c4717ddf2f13ced5e382f6c7249 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 61 1.0E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PA257_2802 9b683c4717ddf2f13ced5e382f6c7249 64 Pfam PF01632 Ribosomal protein L35 2 60 4.0E-23 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2802 9b683c4717ddf2f13ced5e382f6c7249 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.841 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PA257_2802 9b683c4717ddf2f13ced5e382f6c7249 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 4.6E-20 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PA257_2802 9b683c4717ddf2f13ced5e382f6c7249 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.6E-20 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PA257_2802 9b683c4717ddf2f13ced5e382f6c7249 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 4.6E-20 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PA257_2937 473a65bc27a24a9dc0545ae437558593 235 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 5 232 42.206 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 PA257_2937 473a65bc27a24a9dc0545ae437558593 235 SUPERFAMILY SSF55729 78 233 1.34E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_2937 473a65bc27a24a9dc0545ae437558593 235 PIRSF PIRSF037208 1 235 2.5E-94 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 PA257_2937 473a65bc27a24a9dc0545ae437558593 235 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 2.0E-40 T 12-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 PA257_2937 473a65bc27a24a9dc0545ae437558593 235 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 15 85 7.8E-19 T 12-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 PA257_1681 2e187bf80b538451f5ef5ce4c6379719 295 Gene3D G3DSA:3.40.190.10 88 285 1.4E-62 T 12-10-2018 PA257_1681 2e187bf80b538451f5ef5ce4c6379719 295 SUPERFAMILY SSF53850 88 293 2.31E-42 T 12-10-2018 PA257_1681 2e187bf80b538451f5ef5ce4c6379719 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1681 2e187bf80b538451f5ef5ce4c6379719 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1681 2e187bf80b538451f5ef5ce4c6379719 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1681 2e187bf80b538451f5ef5ce4c6379719 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1681 2e187bf80b538451f5ef5ce4c6379719 295 Gene3D G3DSA:1.10.10.10 1 85 1.0E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1681 2e187bf80b538451f5ef5ce4c6379719 295 SUPERFAMILY SSF46785 1 80 2.42E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1681 2e187bf80b538451f5ef5ce4c6379719 295 Gene3D G3DSA:3.40.190.10 162 267 1.4E-62 T 12-10-2018 PA257_1681 2e187bf80b538451f5ef5ce4c6379719 295 Pfam PF03466 LysR substrate binding domain 87 291 1.7E-45 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3229 325905cccafafcfaa7d72b4afb92c2e9 254 Pfam PF00975 Thioesterase domain 7 232 1.6E-39 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 PA257_3229 325905cccafafcfaa7d72b4afb92c2e9 254 SUPERFAMILY SSF53474 2 232 6.26E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3229 325905cccafafcfaa7d72b4afb92c2e9 254 Gene3D G3DSA:3.40.50.1820 5 236 4.6E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:3.30.70.1320 134 325 1.7E-284 T 12-10-2018 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:1.20.1640.10 10 500 1.7E-284 T 12-10-2018 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82693 42 130 7.67E-21 T 12-10-2018 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:3.30.70.1440 648 842 1.7E-284 T 12-10-2018 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82866 295 489 2.35E-48 T 12-10-2018 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82714 183 264 1.27E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82714 699 785 3.66E-19 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:1.20.1640.10 501 1000 1.7E-284 T 12-10-2018 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.0E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.0E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.0E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.0E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.0E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.0E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.0E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.0E-71 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82866 783 1006 1.31E-43 T 12-10-2018 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:3.30.2090.10 178 268 1.7E-284 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82693 137 323 1.02E-19 T 12-10-2018 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:3.30.70.1430 555 647 1.7E-284 T 12-10-2018 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 1.1E-269 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:3.30.2090.10 698 786 1.7E-284 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82693 553 650 1.2E-15 T 12-10-2018 PA257_0889 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:3.30.70.1430 40 794 1.7E-284 T 12-10-2018 PA257_6544 55bcc9364615a7e7c92c74a3da160937 513 Pfam PF01293 Phosphoenolpyruvate carboxykinase 7 467 3.2E-188 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PA257_6544 55bcc9364615a7e7c92c74a3da160937 513 Gene3D G3DSA:2.170.8.10 27 321 6.9E-203 T 12-10-2018 PA257_6544 55bcc9364615a7e7c92c74a3da160937 513 SUPERFAMILY SSF68923 5 199 9.42E-69 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 PA257_6544 55bcc9364615a7e7c92c74a3da160937 513 SUPERFAMILY SSF53795 200 513 5.72E-127 T 12-10-2018 PA257_6544 55bcc9364615a7e7c92c74a3da160937 513 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 1 513 52.372 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PA257_6544 55bcc9364615a7e7c92c74a3da160937 513 Gene3D G3DSA:3.90.228.20 207 501 6.9E-203 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 PA257_6544 55bcc9364615a7e7c92c74a3da160937 513 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 237 252 - T 12-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PA257_6544 55bcc9364615a7e7c92c74a3da160937 513 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 513 3.5E-183 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PA257_6544 55bcc9364615a7e7c92c74a3da160937 513 PIRSF PIRSF006294 1 513 5.0E-207 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PA257_6544 55bcc9364615a7e7c92c74a3da160937 513 Gene3D G3DSA:3.40.449.10 9 206 6.9E-203 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 PA257_4753 02badb167a7a6dec9acc8234d5354375 636 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 56 171 1.2E-8 T 12-10-2018 PA257_4753 02badb167a7a6dec9acc8234d5354375 636 Gene3D G3DSA:3.30.230.80 258 401 4.3E-13 T 12-10-2018 PA257_4753 02badb167a7a6dec9acc8234d5354375 636 SUPERFAMILY SSF54211 256 478 1.52E-28 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_4753 02badb167a7a6dec9acc8234d5354375 636 SUPERFAMILY SSF55874 36 232 9.99E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4753 02badb167a7a6dec9acc8234d5354375 636 PRINTS PR00775 90kDa heat shock protein signature 56 78 2.3E-13 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4753 02badb167a7a6dec9acc8234d5354375 636 PRINTS PR00775 90kDa heat shock protein signature 140 162 2.3E-13 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4753 02badb167a7a6dec9acc8234d5354375 636 PRINTS PR00775 90kDa heat shock protein signature 209 227 2.3E-13 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4753 02badb167a7a6dec9acc8234d5354375 636 PRINTS PR00775 90kDa heat shock protein signature 191 208 2.3E-13 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4753 02badb167a7a6dec9acc8234d5354375 636 Gene3D G3DSA:3.30.565.10 38 231 2.8E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4753 02badb167a7a6dec9acc8234d5354375 636 PIRSF PIRSF002583 16 632 2.8E-96 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 PA257_4753 02badb167a7a6dec9acc8234d5354375 636 Pfam PF00183 Hsp90 protein 300 377 1.6E-8 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 PA257_6453 d6c28651b88460d38646e50c2fe4598a 406 Pfam PF13679 Methyltransferase domain 131 236 9.7E-13 T 12-10-2018 IPR025714 Methyltransferase domain PA257_6453 d6c28651b88460d38646e50c2fe4598a 406 SUPERFAMILY SSF53335 124 191 2.69E-6 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6453 d6c28651b88460d38646e50c2fe4598a 406 Gene3D G3DSA:3.40.50.150 49 230 1.2E-5 T 12-10-2018 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Gene3D G3DSA:2.60.40.2380 41 185 5.4E-63 T 12-10-2018 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 580 5.7E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 5.7E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 5.7E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 SUPERFAMILY SSF52172 807 929 2.85E-35 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF00072 Response regulator receiver domain 810 924 4.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF00072 Response regulator receiver domain 661 776 6.2E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF00512 His Kinase A (phospho-acceptor) domain 415 479 1.1E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 SUPERFAMILY SSF47384 409 480 1.18E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Gene3D G3DSA:3.40.50.2300 806 928 4.3E-37 T 12-10-2018 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 SMART SM00387 526 641 2.3E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF07695 7TM diverse intracellular signalling 189 388 1.4E-22 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 526 640 2.6E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Gene3D G3DSA:1.10.287.130 383 477 2.8E-24 T 12-10-2018 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF07696 7TMR-DISM extracellular 2 49 170 2.4E-21 T 12-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Gene3D G3DSA:3.30.565.10 478 643 2.1E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 SMART SM00448 808 924 9.9E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 SMART SM00448 658 777 6.2E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 SMART SM00388 414 479 1.9E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 SUPERFAMILY SSF52172 656 782 4.27E-27 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 SUPERFAMILY SSF55874 468 640 8.51E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6132 db2fa9b15a4edec1d256a9b87fb8db37 942 Gene3D G3DSA:3.40.50.12740 657 805 4.1E-28 T 12-10-2018 PA257_5087 1a738275b39e8a19c24f0df07411ca87 102 Pfam PF01527 Transposase 3 76 9.6E-21 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_5087 1a738275b39e8a19c24f0df07411ca87 102 SUPERFAMILY SSF46689 5 95 2.87E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5087 1a738275b39e8a19c24f0df07411ca87 102 Gene3D G3DSA:1.10.10.60 9 93 1.8E-12 T 12-10-2018 PA257_6168 59a144a589eed203e805dcdd0b1913a6 209 Gene3D G3DSA:1.10.357.10 54 209 5.7E-62 T 12-10-2018 PA257_6168 59a144a589eed203e805dcdd0b1913a6 209 SUPERFAMILY SSF46689 2 78 7.18E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6168 59a144a589eed203e805dcdd0b1913a6 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.4E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_6168 59a144a589eed203e805dcdd0b1913a6 209 Gene3D G3DSA:1.10.10.60 1 53 4.4E-27 T 12-10-2018 PA257_3951 9595f4a1e42bad4b75f585d8f559ddfb 339 Gene3D G3DSA:1.10.3720.10 130 334 2.2E-19 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3951 9595f4a1e42bad4b75f585d8f559ddfb 339 SUPERFAMILY SSF161098 136 322 4.32E-20 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3951 9595f4a1e42bad4b75f585d8f559ddfb 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 9.0E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3951 9595f4a1e42bad4b75f585d8f559ddfb 339 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 45 6.1E-6 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PA257_2948 c20170852f7434f908c4f3ff41eb573e 111 SUPERFAMILY SSF69721 2 111 9.42E-35 T 12-10-2018 IPR025526 DsrC-like domain superfamily PA257_2948 c20170852f7434f908c4f3ff41eb573e 111 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 111 5.6E-43 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE PA257_2948 c20170852f7434f908c4f3ff41eb573e 111 Gene3D G3DSA:3.30.1420.10 2 39 1.1E-14 T 12-10-2018 PA257_2948 c20170852f7434f908c4f3ff41eb573e 111 PIRSF PIRSF006223 4 111 7.3E-33 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE PA257_2948 c20170852f7434f908c4f3ff41eb573e 111 Gene3D G3DSA:1.10.10.370 41 111 5.8E-24 T 12-10-2018 PA257_2948 c20170852f7434f908c4f3ff41eb573e 111 Pfam PF04358 DsrC like protein 6 111 3.6E-36 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE PA257_2174 79470228495f9728cffaf110e35952cf 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2174 79470228495f9728cffaf110e35952cf 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2174 79470228495f9728cffaf110e35952cf 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2174 79470228495f9728cffaf110e35952cf 297 SUPERFAMILY SSF46785 1 110 6.98E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2174 79470228495f9728cffaf110e35952cf 297 SUPERFAMILY SSF53850 86 289 4.54E-44 T 12-10-2018 PA257_2174 79470228495f9728cffaf110e35952cf 297 Gene3D G3DSA:3.40.190.290 91 293 9.7E-43 T 12-10-2018 PA257_2174 79470228495f9728cffaf110e35952cf 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.0E-23 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2174 79470228495f9728cffaf110e35952cf 297 Pfam PF03466 LysR substrate binding domain 87 288 2.1E-45 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2174 79470228495f9728cffaf110e35952cf 297 Gene3D G3DSA:1.10.10.10 1 89 6.7E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 Pfam PF01171 PP-loop family 23 199 8.1E-59 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 203 8.1E-52 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 Gene3D G3DSA:3.40.50.620 15 233 8.9E-76 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 SMART SM00977 364 432 2.1E-19 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 Pfam PF11734 TilS substrate C-terminal domain 364 432 1.4E-16 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 Pfam PF09179 TilS substrate binding domain 260 323 2.6E-13 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 364 409 2.1E-14 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 SUPERFAMILY SSF82829 248 328 3.4E-17 T 12-10-2018 PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 Gene3D G3DSA:1.20.59.20 242 326 4.9E-8 T 12-10-2018 PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 396 23.098 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 SUPERFAMILY SSF52402 17 232 7.28E-62 T 12-10-2018 PA257_1583 b67ee56c29df975af8ab10c69b8a1fc0 442 SUPERFAMILY SSF56037 338 434 7.85E-19 T 12-10-2018 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 282 297 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 SUPERFAMILY SSF51419 75 352 1.23E-67 T 12-10-2018 IPR029066 PLP-binding barrel PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 Gene3D G3DSA:3.20.20.10 76 355 3.8E-224 T 12-10-2018 IPR029066 PLP-binding barrel PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 107 125 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 12 636 41.846 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 SUPERFAMILY SSF50621 459 567 1.81E-6 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 468 489 5.1E-69 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 546 567 5.1E-69 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 153 168 5.1E-69 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 179 200 5.1E-69 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 493 518 5.1E-69 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 203 225 5.1E-69 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 99 113 5.1E-69 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 75 90 5.1E-69 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 330 347 5.1E-69 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PIRSF PIRSF001336 1 636 3.6E-250 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 350 1.5E-43 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 Gene3D G3DSA:1.20.58.930 372 464 3.8E-224 T 12-10-2018 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 130 142 2.4E-16 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 2.4E-16 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 107 125 2.4E-16 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 2.4E-16 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 546 559 2.4E-16 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 Gene3D G3DSA:2.40.37.10 23 570 3.8E-224 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PA257_6114 2b3b664b3ddbaa450286e18ab7433d74 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 14 636 3.9E-276 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PA257_0607 8b844c76c2e5b19ada75c95d8134885e 206 Gene3D G3DSA:1.20.1050.10 87 198 1.2E-73 T 12-10-2018 PA257_0607 8b844c76c2e5b19ada75c95d8134885e 206 Gene3D G3DSA:3.40.30.10 7 200 1.2E-73 T 12-10-2018 PA257_0607 8b844c76c2e5b19ada75c95d8134885e 206 SUPERFAMILY SSF47616 77 205 1.67E-18 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_0607 8b844c76c2e5b19ada75c95d8134885e 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 86 6.3E-18 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_0607 8b844c76c2e5b19ada75c95d8134885e 206 Pfam PF13410 Glutathione S-transferase, C-terminal domain 129 193 2.9E-8 T 12-10-2018 PA257_0607 8b844c76c2e5b19ada75c95d8134885e 206 SUPERFAMILY SSF52833 5 108 2.88E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_6587 3630fa4048043aac7648bb56bad47e3d 325 Gene3D G3DSA:3.40.50.720 123 267 2.6E-106 T 12-10-2018 PA257_6587 3630fa4048043aac7648bb56bad47e3d 325 SUPERFAMILY SSF50129 1 140 3.5E-41 T 12-10-2018 IPR011032 GroES-like superfamily PA257_6587 3630fa4048043aac7648bb56bad47e3d 325 SUPERFAMILY SSF51735 111 274 3.18E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6587 3630fa4048043aac7648bb56bad47e3d 325 Gene3D G3DSA:3.90.180.10 14 318 2.6E-106 T 12-10-2018 PA257_6587 3630fa4048043aac7648bb56bad47e3d 325 SMART SM00829 10 322 1.6E-57 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_6587 3630fa4048043aac7648bb56bad47e3d 325 Pfam PF00107 Zinc-binding dehydrogenase 151 272 4.9E-32 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_6587 3630fa4048043aac7648bb56bad47e3d 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 7.8E-11 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_5223 bbc02abe43160815194144c9e30b5a54 472 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 462 3.9E-189 T 12-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 PA257_4194 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 5.1E-39 T 12-10-2018 PA257_4194 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 5.1E-39 T 12-10-2018 PA257_4194 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 5.1E-39 T 12-10-2018 PA257_4194 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 5.1E-39 T 12-10-2018 PA257_4194 25b3afda26f1b15efac299242e14f132 295 SUPERFAMILY SSF51735 1 122 1.93E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4194 25b3afda26f1b15efac299242e14f132 295 Gene3D G3DSA:3.40.50.720 1 123 1.1E-49 T 12-10-2018 PA257_4194 25b3afda26f1b15efac299242e14f132 295 Gene3D G3DSA:3.40.50.261 124 288 1.4E-76 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_4194 25b3afda26f1b15efac299242e14f132 295 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site PA257_4194 25b3afda26f1b15efac299242e14f132 295 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PA257_4194 25b3afda26f1b15efac299242e14f132 295 PIRSF PIRSF001553 1 290 1.6E-133 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_4194 25b3afda26f1b15efac299242e14f132 295 SUPERFAMILY SSF52210 123 289 1.16E-57 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_4194 25b3afda26f1b15efac299242e14f132 295 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 7.7E-145 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_4194 25b3afda26f1b15efac299242e14f132 295 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 42.831 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_4194 25b3afda26f1b15efac299242e14f132 295 SMART SM00881 4 100 1.5E-36 T 12-10-2018 IPR003781 CoA-binding GO:0048037 PA257_4194 25b3afda26f1b15efac299242e14f132 295 Pfam PF02629 CoA binding domain 6 99 7.8E-32 T 12-10-2018 IPR003781 CoA-binding GO:0048037 PA257_4194 25b3afda26f1b15efac299242e14f132 295 Pfam PF00549 CoA-ligase 151 270 6.1E-22 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_1385 09f2f75e54a80e869b589b96ce7c04c6 158 SUPERFAMILY SSF110087 1 146 4.32E-51 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily PA257_1385 09f2f75e54a80e869b589b96ce7c04c6 158 Gene3D G3DSA:2.60.40.1890 35 148 1.3E-41 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily PA257_1385 09f2f75e54a80e869b589b96ce7c04c6 158 Pfam PF04314 Copper chaperone PCu(A)C 30 138 3.8E-38 T 12-10-2018 IPR007410 Copper chaperone PCuAC PA257_3948 c5a4adf94cb56ad64b3d7cdb0f2c775d 609 Gene3D G3DSA:3.10.105.10 318 576 7.3E-237 T 12-10-2018 PA257_3948 c5a4adf94cb56ad64b3d7cdb0f2c775d 609 PIRSF PIRSF002741 1 606 8.6E-98 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PA257_3948 c5a4adf94cb56ad64b3d7cdb0f2c775d 609 SUPERFAMILY SSF53850 48 603 8.32E-115 T 12-10-2018 PA257_3948 c5a4adf94cb56ad64b3d7cdb0f2c775d 609 Gene3D G3DSA:3.40.190.10 25 601 7.3E-237 T 12-10-2018 PA257_3948 c5a4adf94cb56ad64b3d7cdb0f2c775d 609 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 113 517 6.8E-68 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain PA257_4242 47b85eb241fea8b0c719959ccf04bd57 460 PIRSF PIRSF000167 3 459 4.0E-168 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 PA257_4242 47b85eb241fea8b0c719959ccf04bd57 460 Pfam PF06969 HemN C-terminal domain 369 435 5.0E-12 T 12-10-2018 IPR010723 HemN, C-terminal PA257_4242 47b85eb241fea8b0c719959ccf04bd57 460 Pfam PF04055 Radical SAM superfamily 58 232 3.4E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_4242 47b85eb241fea8b0c719959ccf04bd57 460 Gene3D G3DSA:1.10.10.920 368 460 7.5E-32 T 12-10-2018 PA257_4242 47b85eb241fea8b0c719959ccf04bd57 460 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 460 3.1E-173 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 PA257_4242 47b85eb241fea8b0c719959ccf04bd57 460 Gene3D G3DSA:3.80.30.20 2 367 6.0E-119 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PA257_4242 47b85eb241fea8b0c719959ccf04bd57 460 SMART SM00729 53 276 4.8E-51 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_4242 47b85eb241fea8b0c719959ccf04bd57 460 SUPERFAMILY SSF102114 5 448 1.27E-134 T 12-10-2018 PA257_2986 045db9c6cbe13f188a466f291ba103ae 145 Gene3D G3DSA:3.30.70.920 53 138 6.2E-20 T 12-10-2018 PA257_2986 045db9c6cbe13f188a466f291ba103ae 145 SUPERFAMILY SSF46785 2 62 8.1E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2986 045db9c6cbe13f188a466f291ba103ae 145 SMART SM00344 2 108 2.5E-28 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PA257_2986 045db9c6cbe13f188a466f291ba103ae 145 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 8.9E-14 T 12-10-2018 PA257_2986 045db9c6cbe13f188a466f291ba103ae 145 Pfam PF01037 Lrp/AsnC ligand binding domain 68 134 7.7E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PA257_2986 045db9c6cbe13f188a466f291ba103ae 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.8E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_2986 045db9c6cbe13f188a466f291ba103ae 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.8E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_2986 045db9c6cbe13f188a466f291ba103ae 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.8E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_2986 045db9c6cbe13f188a466f291ba103ae 145 Gene3D G3DSA:1.10.10.10 3 52 2.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2986 045db9c6cbe13f188a466f291ba103ae 145 SUPERFAMILY SSF54909 64 137 4.29E-15 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_0035 11b473d502208c0460dd70db82c53ccd 328 Gene3D G3DSA:1.10.575.10 144 318 1.9E-9 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 PA257_0035 11b473d502208c0460dd70db82c53ccd 328 SUPERFAMILY SSF48537 133 320 7.06E-34 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 311 3.9E-126 T 12-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 SUPERFAMILY SSF52374 342 474 4.74E-25 T 12-10-2018 PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 Gene3D G3DSA:3.40.50.620 325 474 4.6E-39 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 Pfam PF00294 pfkB family carbohydrate kinase 13 304 1.0E-48 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 473 43.403 T 12-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 SUPERFAMILY SSF53613 12 309 1.56E-58 T 12-10-2018 IPR029056 Ribokinase-like PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 Gene3D G3DSA:3.40.1190.20 2 308 1.6E-110 T 12-10-2018 IPR029056 Ribokinase-like PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 341 407 2.2E-16 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 Pfam PF01467 Cytidylyltransferase-like 344 434 3.1E-16 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PA257_6284 78a2e7f05c42702847849a65ec62df6c 474 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 1.3E-65 T 12-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 PA257_1814 85e865f19d3e193752895e117d932e8c 654 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 258 651 2.4E-135 T 12-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 PA257_1814 85e865f19d3e193752895e117d932e8c 654 SUPERFAMILY SSF54373 465 543 5.89E-6 T 12-10-2018 PA257_1814 85e865f19d3e193752895e117d932e8c 654 Pfam PF01266 FAD dependent oxidoreductase 259 622 5.8E-49 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_1814 85e865f19d3e193752895e117d932e8c 654 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 112 233 5.7E-45 T 12-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 PA257_1814 85e865f19d3e193752895e117d932e8c 654 Gene3D G3DSA:3.30.9.10 339 557 5.0E-142 T 12-10-2018 PA257_1814 85e865f19d3e193752895e117d932e8c 654 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 646 27.134 T 12-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 PA257_1814 85e865f19d3e193752895e117d932e8c 654 SUPERFAMILY SSF51905 259 650 1.68E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1814 85e865f19d3e193752895e117d932e8c 654 Gene3D G3DSA:3.40.50.150 7 241 5.7E-97 T 12-10-2018 PA257_1814 85e865f19d3e193752895e117d932e8c 654 Gene3D G3DSA:3.50.50.60 257 648 5.0E-142 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1814 85e865f19d3e193752895e117d932e8c 654 SUPERFAMILY SSF53335 9 204 4.67E-7 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0016 feec80d4cd5102727755916eb7ae11d9 184 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 11 154 5.4E-35 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 PA257_0016 feec80d4cd5102727755916eb7ae11d9 184 SUPERFAMILY SSF56784 6 183 1.34E-46 T 12-10-2018 IPR036412 HAD-like superfamily PA257_0016 feec80d4cd5102727755916eb7ae11d9 184 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 11 153 2.0E-43 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 PA257_0016 feec80d4cd5102727755916eb7ae11d9 184 PIRSF PIRSF004682 2 180 9.5E-54 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 PA257_0016 feec80d4cd5102727755916eb7ae11d9 184 Gene3D G3DSA:3.40.50.1000 10 184 4.7E-52 T 12-10-2018 IPR023214 HAD superfamily PA257_0016 feec80d4cd5102727755916eb7ae11d9 184 Pfam PF13242 HAD-hyrolase-like 107 176 3.1E-12 T 12-10-2018 PA257_4950 5769286ff8d1c9350591e6e8d9234384 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 16 403 70.449 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PA257_4950 5769286ff8d1c9350591e6e8d9234384 406 SUPERFAMILY SSF53383 16 402 1.33E-127 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_4950 5769286ff8d1c9350591e6e8d9234384 406 Pfam PF00202 Aminotransferase class-III 20 400 4.7E-126 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_4950 5769286ff8d1c9350591e6e8d9234384 406 PIRSF PIRSF000521 172 403 2.6E-32 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_4950 5769286ff8d1c9350591e6e8d9234384 406 PIRSF PIRSF000521 28 159 1.3E-5 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_4950 5769286ff8d1c9350591e6e8d9234384 406 Gene3D G3DSA:3.40.640.10 60 305 4.0E-150 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_4950 5769286ff8d1c9350591e6e8d9234384 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 1.6E-214 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 PA257_4950 5769286ff8d1c9350591e6e8d9234384 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 400 1.4E-151 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PA257_4950 5769286ff8d1c9350591e6e8d9234384 406 Gene3D G3DSA:3.90.1150.10 26 394 4.0E-150 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_4950 5769286ff8d1c9350591e6e8d9234384 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_3317 36fd33a7aa49885a170827aeef7215a8 419 Gene3D G3DSA:2.40.110.10 131 230 1.0E-30 T 12-10-2018 PA257_3317 36fd33a7aa49885a170827aeef7215a8 419 PIRSF PIRSF016578 144 394 1.4E-23 T 12-10-2018 PA257_3317 36fd33a7aa49885a170827aeef7215a8 419 PIRSF PIRSF016578 5 93 1.1E-10 T 12-10-2018 PA257_3317 36fd33a7aa49885a170827aeef7215a8 419 Gene3D G3DSA:1.20.140.10 231 409 1.8E-57 T 12-10-2018 PA257_3317 36fd33a7aa49885a170827aeef7215a8 419 SUPERFAMILY SSF56645 28 230 6.81E-44 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_3317 36fd33a7aa49885a170827aeef7215a8 419 SUPERFAMILY SSF47203 241 386 2.09E-15 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_3317 36fd33a7aa49885a170827aeef7215a8 419 Gene3D G3DSA:1.10.540.10 17 130 1.3E-19 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_3317 36fd33a7aa49885a170827aeef7215a8 419 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 221 1.0E-8 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_3317 36fd33a7aa49885a170827aeef7215a8 419 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 103 4.9E-6 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_3317 36fd33a7aa49885a170827aeef7215a8 419 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 248 384 4.9E-17 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PA257_5478 3d85c602a60126fb2048c56c6670a846 469 Gene3D G3DSA:3.40.50.720 5 91 1.0E-31 T 12-10-2018 PA257_5478 3d85c602a60126fb2048c56c6670a846 469 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 4 461 43.896 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5478 3d85c602a60126fb2048c56c6670a846 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 399 8.3E-21 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PA257_5478 3d85c602a60126fb2048c56c6670a846 469 Gene3D G3DSA:3.90.190.20 307 461 7.4E-47 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_5478 3d85c602a60126fb2048c56c6670a846 469 SUPERFAMILY SSF53623 90 307 1.19E-74 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_5478 3d85c602a60126fb2048c56c6670a846 469 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 6 455 9.0E-170 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5478 3d85c602a60126fb2048c56c6670a846 469 Pfam PF08245 Mur ligase middle domain 109 288 9.3E-28 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PA257_5478 3d85c602a60126fb2048c56c6670a846 469 SUPERFAMILY SSF53244 308 457 8.42E-47 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_5478 3d85c602a60126fb2048c56c6670a846 469 Gene3D G3DSA:3.40.1190.10 93 306 4.8E-82 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_5478 3d85c602a60126fb2048c56c6670a846 469 Pfam PF01225 Mur ligase family, catalytic domain 6 104 3.6E-27 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PA257_5478 3d85c602a60126fb2048c56c6670a846 469 SUPERFAMILY SSF51984 5 91 3.92E-29 T 12-10-2018 PA257_6422 c4a55980bb84ae5ee46d0e5927b71929 84 Gene3D G3DSA:3.40.30.10 1 84 6.2E-29 T 12-10-2018 PA257_6422 c4a55980bb84ae5ee46d0e5927b71929 84 Pfam PF00462 Glutaredoxin 4 63 7.8E-22 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PA257_6422 c4a55980bb84ae5ee46d0e5927b71929 84 PRINTS PR00160 Glutaredoxin signature 46 59 1.2E-15 T 12-10-2018 IPR014025 Glutaredoxin subgroup PA257_6422 c4a55980bb84ae5ee46d0e5927b71929 84 PRINTS PR00160 Glutaredoxin signature 4 22 1.2E-15 T 12-10-2018 IPR014025 Glutaredoxin subgroup PA257_6422 c4a55980bb84ae5ee46d0e5927b71929 84 PRINTS PR00160 Glutaredoxin signature 60 73 1.2E-15 T 12-10-2018 IPR014025 Glutaredoxin subgroup PA257_6422 c4a55980bb84ae5ee46d0e5927b71929 84 SUPERFAMILY SSF52833 1 83 1.2E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_6422 c4a55980bb84ae5ee46d0e5927b71929 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 2.0E-35 T 12-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 PA257_6422 c4a55980bb84ae5ee46d0e5927b71929 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 PA257_3473 17312b6737565ff1339a3c0423ddc5eb 296 Pfam PF00892 EamA-like transporter family 1 130 7.9E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_3473 17312b6737565ff1339a3c0423ddc5eb 296 SUPERFAMILY SSF103481 44 131 1.31E-10 T 12-10-2018 PA257_0154 52686d1e87b65186fb45bbd7babd221e 95 Pfam PF07883 Cupin domain 23 90 7.9E-8 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_0154 52686d1e87b65186fb45bbd7babd221e 95 SUPERFAMILY SSF51182 4 91 5.2E-14 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_0154 52686d1e87b65186fb45bbd7babd221e 95 Gene3D G3DSA:2.60.120.10 2 95 2.4E-27 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_5090 64782fff8b0db20e01b3b6b3d0620216 294 Gene3D G3DSA:3.40.190.290 86 290 4.4E-32 T 12-10-2018 PA257_5090 64782fff8b0db20e01b3b6b3d0620216 294 SUPERFAMILY SSF46785 3 105 1.24E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5090 64782fff8b0db20e01b3b6b3d0620216 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 3.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5090 64782fff8b0db20e01b3b6b3d0620216 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 3.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5090 64782fff8b0db20e01b3b6b3d0620216 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 3.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5090 64782fff8b0db20e01b3b6b3d0620216 294 Pfam PF03466 LysR substrate binding domain 81 283 6.4E-40 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_5090 64782fff8b0db20e01b3b6b3d0620216 294 SUPERFAMILY SSF53850 82 285 9.95E-34 T 12-10-2018 PA257_5090 64782fff8b0db20e01b3b6b3d0620216 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 1.2E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5090 64782fff8b0db20e01b3b6b3d0620216 294 Gene3D G3DSA:1.10.10.10 1 85 5.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 SMART SM00535 20 148 1.8E-59 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 Gene3D G3DSA:3.30.160.20 153 223 8.5E-16 T 12-10-2018 PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 Gene3D G3DSA:1.10.1520.10 1 145 4.5E-45 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 Pfam PF00035 Double-stranded RNA binding motif 155 219 8.4E-8 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 SUPERFAMILY SSF69065 4 158 9.07E-50 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 Pfam PF14622 Ribonuclease-III-like 18 139 6.9E-35 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 SUPERFAMILY SSF54768 108 226 5.79E-26 T 12-10-2018 PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.116 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 220 2.4E-69 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 PA257_5139 8a85b935615972fe6aafaebefd54bc09 229 SMART SM00358 155 223 7.1E-16 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain PA257_2207 0a32de8c2931c6a2f5e28390cf069e6a 372 Pfam PF00795 Carbon-nitrogen hydrolase 160 285 5.2E-9 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PA257_2207 0a32de8c2931c6a2f5e28390cf069e6a 372 Gene3D G3DSA:3.60.110.10 62 291 1.7E-25 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_2207 0a32de8c2931c6a2f5e28390cf069e6a 372 SUPERFAMILY SSF56317 62 284 1.44E-24 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_4614 eb358facd1a0e3938aac3e6f7e9e8a6d 274 SUPERFAMILY SSF52402 10 228 2.07E-56 T 12-10-2018 PA257_4614 eb358facd1a0e3938aac3e6f7e9e8a6d 274 PIRSF PIRSF004976 3 267 4.3E-71 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 PA257_4614 eb358facd1a0e3938aac3e6f7e9e8a6d 274 Gene3D G3DSA:3.40.50.620 3 258 1.7E-45 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_4614 eb358facd1a0e3938aac3e6f7e9e8a6d 274 Pfam PF01171 PP-loop family 34 197 7.0E-14 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 PA257_4614 eb358facd1a0e3938aac3e6f7e9e8a6d 274 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 1 264 58.223 T 12-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 PA257_6391 394d8212089590c79caf150cb2475e0a 559 Pfam PF17392 Urocanase C-terminal domain 352 546 2.6E-92 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6391 394d8212089590c79caf150cb2475e0a 559 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6391 394d8212089590c79caf150cb2475e0a 559 Pfam PF17391 Urocanase N-terminal domain 12 138 9.7E-63 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6391 394d8212089590c79caf150cb2475e0a 559 Gene3D G3DSA:3.40.50.10730 142 349 9.0E-266 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6391 394d8212089590c79caf150cb2475e0a 559 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 51.041 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6391 394d8212089590c79caf150cb2475e0a 559 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6391 394d8212089590c79caf150cb2475e0a 559 Pfam PF01175 Urocanase Rossmann-like domain 141 349 4.0E-88 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6391 394d8212089590c79caf150cb2475e0a 559 SUPERFAMILY SSF111326 8 555 3.79E-264 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6391 394d8212089590c79caf150cb2475e0a 559 Gene3D G3DSA:3.40.1770.10 17 542 9.0E-266 T 12-10-2018 PA257_6391 394d8212089590c79caf150cb2475e0a 559 PIRSF PIRSF001423 3 559 1.3E-297 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_4857 c8239d74171b060e2749f58a48e31458 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 353 2.3E-17 T 12-10-2018 PA257_4857 c8239d74171b060e2749f58a48e31458 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.3E-17 T 12-10-2018 PA257_4857 c8239d74171b060e2749f58a48e31458 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 2.3E-17 T 12-10-2018 PA257_4857 c8239d74171b060e2749f58a48e31458 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.3E-17 T 12-10-2018 PA257_4857 c8239d74171b060e2749f58a48e31458 409 Gene3D G3DSA:3.50.50.60 10 353 4.4E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4857 c8239d74171b060e2749f58a48e31458 409 SUPERFAMILY SSF51905 10 364 7.64E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4857 c8239d74171b060e2749f58a48e31458 409 Pfam PF01494 FAD binding domain 9 323 1.2E-24 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 PA257_4857 c8239d74171b060e2749f58a48e31458 409 SUPERFAMILY SSF54373 182 281 3.45E-13 T 12-10-2018 PA257_4857 c8239d74171b060e2749f58a48e31458 409 Gene3D G3DSA:3.30.9.30 42 361 4.4E-114 T 12-10-2018 PA257_3105 07ff96bb647b7b315ea579d461637721 304 SUPERFAMILY SSF46785 5 116 5.69E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3105 07ff96bb647b7b315ea579d461637721 304 Gene3D G3DSA:3.40.190.10 98 283 1.3E-42 T 12-10-2018 PA257_3105 07ff96bb647b7b315ea579d461637721 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3105 07ff96bb647b7b315ea579d461637721 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3105 07ff96bb647b7b315ea579d461637721 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3105 07ff96bb647b7b315ea579d461637721 304 Gene3D G3DSA:1.10.10.10 6 94 3.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3105 07ff96bb647b7b315ea579d461637721 304 Gene3D G3DSA:3.40.190.10 172 273 1.3E-42 T 12-10-2018 PA257_3105 07ff96bb647b7b315ea579d461637721 304 SUPERFAMILY SSF53850 97 302 1.78E-38 T 12-10-2018 PA257_3105 07ff96bb647b7b315ea579d461637721 304 Pfam PF03466 LysR substrate binding domain 95 301 2.8E-38 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3105 07ff96bb647b7b315ea579d461637721 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.1E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5433 073b44e85fb6109e95f14c15c2afd734 300 ProSitePatterns PS00018 EF-hand calcium-binding domain. 212 224 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site PA257_5433 073b44e85fb6109e95f14c15c2afd734 300 Pfam PF12483 E3 Ubiquitin ligase 83 183 1.5E-9 T 12-10-2018 IPR022170 E3 Ubiquitin ligase, GIDE-type GO:0004842|GO:0006996|GO:0016567 MetaCyc: PWY-7511|Reactome: R-HSA-5689880 PA257_6080 b647c79462b92b7bffd71b65d8849acc 468 Gene3D G3DSA:3.40.640.10 91 355 3.8E-147 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6080 b647c79462b92b7bffd71b65d8849acc 468 Pfam PF12390 Selenocysteine synthase N terminal 5 42 1.4E-8 T 12-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 PA257_6080 b647c79462b92b7bffd71b65d8849acc 468 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 5 455 1.9E-178 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 PA257_6080 b647c79462b92b7bffd71b65d8849acc 468 Pfam PF03841 L-seryl-tRNA selenium transferase 79 450 4.0E-169 T 12-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 PA257_6080 b647c79462b92b7bffd71b65d8849acc 468 Gene3D G3DSA:3.90.1150.110 6 451 3.8E-147 T 12-10-2018 PA257_6080 b647c79462b92b7bffd71b65d8849acc 468 SUPERFAMILY SSF53383 74 374 5.51E-43 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6080 b647c79462b92b7bffd71b65d8849acc 468 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 466 238.937 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 PA257_1485 b5e9c26241badbabaed725996702319d 336 SUPERFAMILY SSF53474 89 301 3.87E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1485 b5e9c26241badbabaed725996702319d 336 Pfam PF12740 Chlorophyllase enzyme 88 218 8.9E-9 T 12-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 PA257_1485 b5e9c26241badbabaed725996702319d 336 Gene3D G3DSA:3.40.50.1820 81 322 1.0E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6131 35238b1d1416e88a392103466f143b16 429 Gene3D G3DSA:3.30.1490.20 120 189 4.6E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_6131 35238b1d1416e88a392103466f143b16 429 SMART SM01210 329 422 3.2E-55 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_6131 35238b1d1416e88a392103466f143b16 429 SUPERFAMILY SSF52440 1 102 1.18E-34 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_6131 35238b1d1416e88a392103466f143b16 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 289 296 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_6131 35238b1d1416e88a392103466f143b16 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 7.0E-180 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_6131 35238b1d1416e88a392103466f143b16 429 Gene3D G3DSA:3.90.600.10 329 428 6.0E-35 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_6131 35238b1d1416e88a392103466f143b16 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 3.0E-33 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_6131 35238b1d1416e88a392103466f143b16 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 43.471 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_6131 35238b1d1416e88a392103466f143b16 429 Gene3D G3DSA:3.40.50.20 2 94 2.3E-35 T 12-10-2018 PA257_6131 35238b1d1416e88a392103466f143b16 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 330 420 7.9E-30 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_6131 35238b1d1416e88a392103466f143b16 429 Gene3D G3DSA:3.30.470.20 190 328 2.7E-56 T 12-10-2018 PA257_6131 35238b1d1416e88a392103466f143b16 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 102 295 1.4E-82 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_6131 35238b1d1416e88a392103466f143b16 429 SUPERFAMILY SSF56059 103 319 3.01E-64 T 12-10-2018 PA257_6131 35238b1d1416e88a392103466f143b16 429 SMART SM01209 102 295 4.4E-141 T 12-10-2018 PA257_6131 35238b1d1416e88a392103466f143b16 429 SUPERFAMILY SSF51246 328 423 2.04E-33 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PA257_2742 ffca0e7786782bc71fcc940ed4b336ab 531 SMART SM00283 266 530 1.9E-70 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2742 ffca0e7786782bc71fcc940ed4b336ab 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 497 5.7E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2742 ffca0e7786782bc71fcc940ed4b336ab 531 Gene3D G3DSA:1.10.287.950 202 531 1.2E-66 T 12-10-2018 PA257_2742 ffca0e7786782bc71fcc940ed4b336ab 531 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 52 142 1.9E-15 T 12-10-2018 IPR029095 NarX-like, N-terminal PA257_2742 ffca0e7786782bc71fcc940ed4b336ab 531 SUPERFAMILY SSF58104 230 530 2.88E-70 T 12-10-2018 PA257_2342 c2f8a575cd106f473c659e6339d9d2d4 271 Gene3D G3DSA:3.20.10.10 112 271 2.6E-64 T 12-10-2018 PA257_2342 c2f8a575cd106f473c659e6339d9d2d4 271 Pfam PF01063 Amino-transferase class IV 25 246 1.2E-47 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PA257_2342 c2f8a575cd106f473c659e6339d9d2d4 271 SUPERFAMILY SSF56752 4 263 5.36E-73 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PA257_2342 c2f8a575cd106f473c659e6339d9d2d4 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 4 263 7.4E-89 T 12-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 PA257_2342 c2f8a575cd106f473c659e6339d9d2d4 271 Gene3D G3DSA:3.30.470.10 2 111 1.2E-35 T 12-10-2018 PA257_4789 3ed7ace9c62c234d0d80b549f57e6ac8 213 Gene3D G3DSA:1.20.1050.10 88 196 5.6E-85 T 12-10-2018 PA257_4789 3ed7ace9c62c234d0d80b549f57e6ac8 213 SUPERFAMILY SSF52833 1 84 3.77E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4789 3ed7ace9c62c234d0d80b549f57e6ac8 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 2.0E-13 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_4789 3ed7ace9c62c234d0d80b549f57e6ac8 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 197 6.7E-11 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_4789 3ed7ace9c62c234d0d80b549f57e6ac8 213 SUPERFAMILY SSF47616 78 207 7.78E-39 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_4789 3ed7ace9c62c234d0d80b549f57e6ac8 213 Gene3D G3DSA:3.40.30.10 2 203 5.6E-85 T 12-10-2018 PA257_2147 dfbd382c22b7301eb91a33d07bffe78e 354 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 7 339 1.1E-93 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PA257_2147 dfbd382c22b7301eb91a33d07bffe78e 354 SUPERFAMILY SSF53756 4 351 1.88E-101 T 12-10-2018 PA257_2147 dfbd382c22b7301eb91a33d07bffe78e 354 Gene3D G3DSA:3.40.50.2000 2 165 1.2E-93 T 12-10-2018 PA257_2147 dfbd382c22b7301eb91a33d07bffe78e 354 Gene3D G3DSA:3.40.50.2000 166 306 1.2E-93 T 12-10-2018 PA257_0971 4bb27f4e25eaee0e234d72f84dbb11b9 268 Gene3D G3DSA:3.20.20.60 2 263 9.7E-94 T 12-10-2018 PA257_0971 4bb27f4e25eaee0e234d72f84dbb11b9 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 6.6E-62 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PA257_0971 4bb27f4e25eaee0e234d72f84dbb11b9 268 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 254 1.1E-129 T 12-10-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 PA257_0971 4bb27f4e25eaee0e234d72f84dbb11b9 268 SUPERFAMILY SSF51621 3 254 5.93E-85 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 Pfam PF00512 His Kinase A (phospho-acceptor) domain 757 819 2.0E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 SMART SM00387 865 977 1.2E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 SMART SM00091 632 700 3.2E-4 T 12-10-2018 IPR000014 PAS domain PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 Pfam PF00989 PAS fold 635 718 7.1E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 902 916 2.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 951 2.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 920 930 2.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 974 2.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 SUPERFAMILY SSF55785 623 716 5.33E-9 T 12-10-2018 IPR035965 PAS domain superfamily PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 SUPERFAMILY SSF47384 750 819 1.79E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 SMART SM00388 756 822 1.1E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 Gene3D G3DSA:1.10.287.130 738 816 4.6E-19 T 12-10-2018 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 Gene3D G3DSA:3.30.565.10 817 975 5.5E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 633 748 6.0E-9 T 12-10-2018 IPR000014 PAS domain PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 Gene3D G3DSA:3.30.450.20 623 737 5.5E-8 T 12-10-2018 PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 SUPERFAMILY SSF55874 817 978 2.23E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5939 107343bf24965050ef6936e13cf9cb3f 983 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 865 975 1.4E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3577 5088f8d43852a9be825af4867b91ec29 293 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 262 1.7E-103 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type PA257_3577 5088f8d43852a9be825af4867b91ec29 293 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 260 32.037 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type PA257_3577 5088f8d43852a9be825af4867b91ec29 293 PIRSF PIRSF006493 1 292 1.2E-105 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type PA257_3577 5088f8d43852a9be825af4867b91ec29 293 Gene3D G3DSA:2.40.290.10 3 181 1.0E-17 T 12-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily PA257_3577 5088f8d43852a9be825af4867b91ec29 293 SUPERFAMILY SSF100939 2 259 1.63E-51 T 12-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily PA257_3577 5088f8d43852a9be825af4867b91ec29 293 SMART SM00559 53 181 6.4E-49 T 12-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 PA257_3577 5088f8d43852a9be825af4867b91ec29 293 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 193 1.7E-34 T 12-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 PA257_4037 acde26832436904d3f6f4565898d5c14 714 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 203 5.2E-32 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_4037 acde26832436904d3f6f4565898d5c14 714 Gene3D G3DSA:3.90.226.10 1 315 6.9E-102 T 12-10-2018 PA257_4037 acde26832436904d3f6f4565898d5c14 714 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 8.9E-60 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_4037 acde26832436904d3f6f4565898d5c14 714 SUPERFAMILY SSF52096 3 297 2.4E-61 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_4037 acde26832436904d3f6f4565898d5c14 714 Gene3D G3DSA:3.40.50.720 316 499 2.1E-65 T 12-10-2018 PA257_4037 acde26832436904d3f6f4565898d5c14 714 SUPERFAMILY SSF48179 498 640 1.7E-21 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_4037 acde26832436904d3f6f4565898d5c14 714 SUPERFAMILY SSF51735 315 497 3.17E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4037 acde26832436904d3f6f4565898d5c14 714 SUPERFAMILY SSF48179 622 714 3.4E-18 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_4037 acde26832436904d3f6f4565898d5c14 714 Gene3D G3DSA:1.10.1040.50 500 706 7.0E-62 T 12-10-2018 PA257_4037 acde26832436904d3f6f4565898d5c14 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 499 599 3.0E-19 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_1822 abaf41b0c3d22276859ffcc7021d3ea7 334 Gene3D G3DSA:3.40.190.10 112 211 1.6E-70 T 12-10-2018 PA257_1822 abaf41b0c3d22276859ffcc7021d3ea7 334 Pfam PF09084 NMT1/THI5 like 63 251 2.9E-25 T 12-10-2018 IPR015168 SsuA/THI5-like PA257_1822 abaf41b0c3d22276859ffcc7021d3ea7 334 Gene3D G3DSA:1.10.8.450 242 275 1.6E-70 T 12-10-2018 PA257_1822 abaf41b0c3d22276859ffcc7021d3ea7 334 SUPERFAMILY SSF53850 35 261 4.58E-52 T 12-10-2018 PA257_1822 abaf41b0c3d22276859ffcc7021d3ea7 334 SMART SM00062 32 248 0.0013 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1822 abaf41b0c3d22276859ffcc7021d3ea7 334 Gene3D G3DSA:3.40.190.10 34 307 1.6E-70 T 12-10-2018 PA257_1822 abaf41b0c3d22276859ffcc7021d3ea7 334 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 33 314 1.8E-74 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 459 8.4E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 3.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 3.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 3.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 Gene3D G3DSA:3.30.565.10 317 460 3.6E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 SMART SM00388 244 309 2.3E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 SUPERFAMILY SSF55874 298 458 2.1E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 SMART SM00387 357 460 1.6E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 309 2.4E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 Pfam PF08521 Two-component sensor kinase N-terminal 19 167 1.5E-41 T 12-10-2018 IPR013727 Two-component sensor kinase, N-terminal PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 SUPERFAMILY SSF47384 227 309 3.34E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_5153 b5f7f271b664a38b2db0dc72625818e3 460 Gene3D G3DSA:1.10.287.130 195 310 9.5E-21 T 12-10-2018 PA257_1916 ecad8bdf07de865f5e26470b660f87a8 292 SUPERFAMILY SSF103481 196 291 4.05E-16 T 12-10-2018 PA257_1916 ecad8bdf07de865f5e26470b660f87a8 292 SUPERFAMILY SSF103481 41 145 5.49E-15 T 12-10-2018 PA257_1916 ecad8bdf07de865f5e26470b660f87a8 292 Pfam PF00892 EamA-like transporter family 154 286 1.1E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_1916 ecad8bdf07de865f5e26470b660f87a8 292 Pfam PF00892 EamA-like transporter family 13 141 1.1E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_3419 e6498b7156d0e08bea6590691a0e4e3d 244 Gene3D G3DSA:2.40.33.20 11 241 2.5E-81 T 12-10-2018 PA257_3419 e6498b7156d0e08bea6590691a0e4e3d 244 SUPERFAMILY SSF50800 13 233 1.2E-75 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PA257_3419 e6498b7156d0e08bea6590691a0e4e3d 244 Pfam PF03473 MOSC domain 56 169 2.2E-25 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PA257_3419 e6498b7156d0e08bea6590691a0e4e3d 244 Pfam PF03475 3-alpha domain 180 222 2.5E-13 T 12-10-2018 IPR005163 3-alpha domain PA257_5398 7ff4f8a9a306ab44cf3fd8532945d30e 439 Pfam PF01566 Natural resistance-associated macrophage protein 54 411 3.3E-132 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5398 7ff4f8a9a306ab44cf3fd8532945d30e 439 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 32 406 6.9E-107 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5398 7ff4f8a9a306ab44cf3fd8532945d30e 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 382 401 2.1E-57 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5398 7ff4f8a9a306ab44cf3fd8532945d30e 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 350 367 2.1E-57 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5398 7ff4f8a9a306ab44cf3fd8532945d30e 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 166 187 2.1E-57 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5398 7ff4f8a9a306ab44cf3fd8532945d30e 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 113 139 2.1E-57 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5398 7ff4f8a9a306ab44cf3fd8532945d30e 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 218 241 2.1E-57 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5398 7ff4f8a9a306ab44cf3fd8532945d30e 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 141 160 2.1E-57 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5398 7ff4f8a9a306ab44cf3fd8532945d30e 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 322 341 2.1E-57 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5398 7ff4f8a9a306ab44cf3fd8532945d30e 439 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 25 438 39.783 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_6875 de815aa9580ee0f7f50384ce5dcc5ea9 457 SUPERFAMILY SSF63411 24 229 1.51E-27 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PA257_6875 de815aa9580ee0f7f50384ce5dcc5ea9 457 Gene3D G3DSA:3.30.830.10 20 242 1.8E-34 T 12-10-2018 PA257_6875 de815aa9580ee0f7f50384ce5dcc5ea9 457 Gene3D G3DSA:3.30.830.10 245 423 1.2E-20 T 12-10-2018 PA257_6875 de815aa9580ee0f7f50384ce5dcc5ea9 457 Pfam PF00675 Insulinase (Peptidase family M16) 36 149 3.8E-14 T 12-10-2018 IPR011765 Peptidase M16, N-terminal PA257_6875 de815aa9580ee0f7f50384ce5dcc5ea9 457 Pfam PF05193 Peptidase M16 inactive domain 193 359 2.5E-16 T 12-10-2018 IPR007863 Peptidase M16, C-terminal PA257_6875 de815aa9580ee0f7f50384ce5dcc5ea9 457 SUPERFAMILY SSF63411 255 418 2.93E-17 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.4E-13 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.4E-13 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.4E-13 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.0E-5 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.0E-5 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 Gene3D G3DSA:3.40.50.880 1 193 5.3E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_0784 ecc1162273a465cee8209371706a63a9 201 Pfam PF00117 Glutamine amidotransferase class-I 4 191 1.7E-55 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_0784 ecc1162273a465cee8209371706a63a9 201 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 3.5E-87 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.3E-37 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.3E-37 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.3E-37 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.3E-37 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.3E-37 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.3E-37 T 12-10-2018 PA257_0784 ecc1162273a465cee8209371706a63a9 201 SUPERFAMILY SSF52317 1 192 1.49E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_2663 35415cd9956167d4ef06a302b862ec5f 259 PIRSF PIRSF006648 2 255 4.3E-23 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_2663 35415cd9956167d4ef06a302b862ec5f 259 Pfam PF01061 ABC-2 type transporter 13 221 2.2E-39 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PA257_2663 35415cd9956167d4ef06a302b862ec5f 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 61 83 5.6E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_2663 35415cd9956167d4ef06a302b862ec5f 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 5.6E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_2663 35415cd9956167d4ef06a302b862ec5f 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 179 198 5.6E-9 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 SUPERFAMILY SSF53474 8 300 4.92E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 Gene3D G3DSA:3.40.50.1820 9 302 5.2E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 Gene3D G3DSA:3.40.50.720 315 581 2.4E-69 T 12-10-2018 PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 401 412 4.1E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 455 463 4.1E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 475 494 4.1E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 SUPERFAMILY SSF51735 321 587 3.45E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 475 494 9.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 496 513 9.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 449 465 9.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 327 344 9.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 401 412 9.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 462 490 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 Pfam PF00106 short chain dehydrogenase 326 516 2.6E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1952 eca990b46838cea2c43a23ea83c0742a 592 Pfam PF00561 alpha/beta hydrolase fold 37 121 7.2E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 SUPERFAMILY SSF52540 74 361 3.81E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 SMART SM00487 25 223 1.2E-57 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 Pfam PF00271 Helicase conserved C-terminal domain 236 340 4.1E-30 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 Pfam PF00270 DEAD/DEAH box helicase 31 193 6.3E-46 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 Gene3D G3DSA:3.40.50.300 1 212 1.4E-72 T 12-10-2018 PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 553 41.807 T 12-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 SMART SM00490 259 340 7.1E-33 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 Gene3D G3DSA:3.40.50.300 215 423 4.4E-48 T 12-10-2018 PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 Gene3D G3DSA:3.30.70.330 484 554 4.3E-13 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PA257_2476 de6e6f069c4374046d13f83eca0d27b0 556 Pfam PF03880 DbpA RNA binding domain 483 551 4.7E-19 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 PIRSF PIRSF500134 1 445 6.4E-178 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 PIRSF PIRSF000124 1 442 3.4E-143 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 6.3E-37 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 Gene3D G3DSA:3.40.50.720 235 453 6.5E-75 T 12-10-2018 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 SUPERFAMILY SSF48179 204 301 1.05E-31 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 4.6E-61 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 SMART SM00984 320 427 3.6E-46 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 426 5.9E-29 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 Gene3D G3DSA:3.40.50.720 1 202 5.6E-76 T 12-10-2018 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 SUPERFAMILY SSF52413 312 437 2.62E-36 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 423 1.4E-132 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 Gene3D G3DSA:1.20.5.100 204 232 3.0E-15 T 12-10-2018 PA257_3715 38c246108ea42c6dd38228e53d6b8570 453 SUPERFAMILY SSF51735 1 195 8.55E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0950 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.7E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0950 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 SUPERFAMILY SSF46785 3 108 2.44E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0950 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 SUPERFAMILY SSF53850 92 294 1.59E-34 T 12-10-2018 PA257_0950 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 Gene3D G3DSA:1.10.10.10 3 89 3.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0950 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 Gene3D G3DSA:3.40.190.290 94 290 4.9E-46 T 12-10-2018 PA257_0950 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 Pfam PF03466 LysR substrate binding domain 92 292 2.1E-35 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2078 84dda81a5a75cd1a53e7ce3b445b4cd8 348 Pfam PF13692 Glycosyl transferases group 1 177 289 8.1E-18 T 12-10-2018 PA257_2078 84dda81a5a75cd1a53e7ce3b445b4cd8 348 Gene3D G3DSA:3.40.50.2000 172 313 1.4E-25 T 12-10-2018 PA257_2078 84dda81a5a75cd1a53e7ce3b445b4cd8 348 Gene3D G3DSA:3.40.50.2000 1 171 1.4E-18 T 12-10-2018 PA257_2078 84dda81a5a75cd1a53e7ce3b445b4cd8 348 SUPERFAMILY SSF53756 1 324 9.42E-62 T 12-10-2018 PA257_2078 84dda81a5a75cd1a53e7ce3b445b4cd8 348 Pfam PF13439 Glycosyltransferase Family 4 11 162 5.4E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PA257_4963 2dac0adb7e3d7a5ea909428890c5ffb7 400 SUPERFAMILY SSF89796 8 400 8.11E-125 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily PA257_4963 2dac0adb7e3d7a5ea909428890c5ffb7 400 Gene3D G3DSA:3.40.50.10540 9 394 5.3E-119 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily PA257_4963 2dac0adb7e3d7a5ea909428890c5ffb7 400 Pfam PF02515 CoA-transferase family III 10 376 2.9E-111 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 PA257_4963 2dac0adb7e3d7a5ea909428890c5ffb7 400 Gene3D G3DSA:3.30.1540.10 237 330 5.3E-119 T 12-10-2018 PA257_6183 b32b710685b6f0d1441ae0c1d5ac2244 351 SUPERFAMILY SSF50022 3 110 4.19E-32 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_6183 b32b710685b6f0d1441ae0c1d5ac2244 351 Pfam PF00355 Rieske [2Fe-2S] domain 7 86 1.8E-17 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PA257_6183 b32b710685b6f0d1441ae0c1d5ac2244 351 SUPERFAMILY SSF55961 117 343 9.42E-58 T 12-10-2018 PA257_6183 b32b710685b6f0d1441ae0c1d5ac2244 351 Gene3D G3DSA:3.30.530.90 131 348 2.0E-67 T 12-10-2018 PA257_6183 b32b710685b6f0d1441ae0c1d5ac2244 351 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 47 69 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 PA257_6183 b32b710685b6f0d1441ae0c1d5ac2244 351 Gene3D G3DSA:2.102.10.10 2 130 2.7E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_4961 bd2f5c94dd27e1851d9939350fffdfbd 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 27 261 1.4E-74 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 PA257_4961 bd2f5c94dd27e1851d9939350fffdfbd 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 27 309 8.1E-107 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PA257_4961 bd2f5c94dd27e1851d9939350fffdfbd 327 Gene3D G3DSA:3.40.190.170 22 323 2.4E-92 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PA257_4961 bd2f5c94dd27e1851d9939350fffdfbd 327 PIRSF PIRSF006470 1 325 2.8E-123 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 PA257_5469 586ae735999a301550e311663068a9fa 916 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.1E-67 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PA257_5469 586ae735999a301550e311663068a9fa 916 SUPERFAMILY SSF81767 227 368 1.57E-40 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 PA257_5469 586ae735999a301550e311663068a9fa 916 SMART SM00958 228 358 1.7E-74 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 PA257_5469 586ae735999a301550e311663068a9fa 916 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 818 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PA257_5469 586ae735999a301550e311663068a9fa 916 SUPERFAMILY SSF52540 5 415 3.27E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5469 586ae735999a301550e311663068a9fa 916 SUPERFAMILY SSF81886 620 904 9.94E-82 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily PA257_5469 586ae735999a301550e311663068a9fa 916 Pfam PF07517 SecA DEAD-like domain 6 402 2.5E-133 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PA257_5469 586ae735999a301550e311663068a9fa 916 Gene3D G3DSA:3.40.50.300 417 620 2.7E-90 T 12-10-2018 PA257_5469 586ae735999a301550e311663068a9fa 916 PRINTS PR00906 SecA protein signature 170 190 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PA257_5469 586ae735999a301550e311663068a9fa 916 PRINTS PR00906 SecA protein signature 63 87 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PA257_5469 586ae735999a301550e311663068a9fa 916 PRINTS PR00906 SecA protein signature 376 393 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PA257_5469 586ae735999a301550e311663068a9fa 916 PRINTS PR00906 SecA protein signature 101 115 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PA257_5469 586ae735999a301550e311663068a9fa 916 PRINTS PR00906 SecA protein signature 117 127 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PA257_5469 586ae735999a301550e311663068a9fa 916 PRINTS PR00906 SecA protein signature 339 361 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PA257_5469 586ae735999a301550e311663068a9fa 916 PRINTS PR00906 SecA protein signature 413 426 1.7E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PA257_5469 586ae735999a301550e311663068a9fa 916 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.8E-34 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 PA257_5469 586ae735999a301550e311663068a9fa 916 Gene3D G3DSA:3.10.450.50 843 915 1.0E-8 T 12-10-2018 PA257_5469 586ae735999a301550e311663068a9fa 916 SUPERFAMILY SSF52540 416 618 4.9E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5469 586ae735999a301550e311663068a9fa 916 ProSitePatterns PS01312 SecA family signature. 500 515 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 PA257_5469 586ae735999a301550e311663068a9fa 916 SMART SM00957 6 402 0.0 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PA257_5469 586ae735999a301550e311663068a9fa 916 Gene3D G3DSA:1.10.3060.10 621 833 8.0E-76 T 12-10-2018 PA257_5469 586ae735999a301550e311663068a9fa 916 Gene3D G3DSA:3.90.1440.10 229 368 2.5E-175 T 12-10-2018 PA257_5469 586ae735999a301550e311663068a9fa 916 Pfam PF02810 SEC-C motif 896 914 2.1E-10 T 12-10-2018 IPR004027 SEC-C motif PA257_5469 586ae735999a301550e311663068a9fa 916 Gene3D G3DSA:3.40.50.300 22 415 2.5E-175 T 12-10-2018 PA257_5469 586ae735999a301550e311663068a9fa 916 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.073 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PA257_0935 4c9c487b8c1cce2411c2347a0d09ff8a 265 Gene3D G3DSA:3.40.50.300 5 254 1.9E-62 T 12-10-2018 PA257_0935 4c9c487b8c1cce2411c2347a0d09ff8a 265 SMART SM00382 29 238 5.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0935 4c9c487b8c1cce2411c2347a0d09ff8a 265 Pfam PF00005 ABC transporter 21 168 2.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0935 4c9c487b8c1cce2411c2347a0d09ff8a 265 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0935 4c9c487b8c1cce2411c2347a0d09ff8a 265 SUPERFAMILY SSF52540 5 230 5.0E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3561 c4b2ff5017f54bd6addafdc6f9ca4ef6 534 Pfam PF08323 Starch synthase catalytic domain 55 289 2.8E-65 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 PA257_3561 c4b2ff5017f54bd6addafdc6f9ca4ef6 534 Gene3D G3DSA:3.40.50.2000 56 519 9.2E-151 T 12-10-2018 PA257_3561 c4b2ff5017f54bd6addafdc6f9ca4ef6 534 Pfam PF00534 Glycosyl transferases group 1 341 484 6.7E-15 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_3561 c4b2ff5017f54bd6addafdc6f9ca4ef6 534 Hamap MF_00484 Glycogen synthase [glgA]. 54 521 40.95 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 PA257_3561 c4b2ff5017f54bd6addafdc6f9ca4ef6 534 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 55 521 2.7E-159 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 PA257_3561 c4b2ff5017f54bd6addafdc6f9ca4ef6 534 Gene3D G3DSA:3.40.50.2000 305 505 9.2E-151 T 12-10-2018 PA257_3561 c4b2ff5017f54bd6addafdc6f9ca4ef6 534 SUPERFAMILY SSF53756 55 524 4.4E-105 T 12-10-2018 PA257_5356 6abc0b81258117f292893ddf22fd9f81 140 Pfam PF01478 Type IV leader peptidase family 2 89 2.2E-5 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PA257_5310 a62b0c5f167de567e30a1e698de8c45b 498 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 138 460 3.8E-21 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal PA257_5310 a62b0c5f167de567e30a1e698de8c45b 498 Pfam PF08479 POTRA domain, ShlB-type 2 75 5.1E-18 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type PA257_5310 a62b0c5f167de567e30a1e698de8c45b 498 Gene3D G3DSA:3.10.20.310 1 76 2.0E-12 T 12-10-2018 PA257_5310 a62b0c5f167de567e30a1e698de8c45b 498 Gene3D G3DSA:2.40.160.50 109 498 1.1E-68 T 12-10-2018 PA257_4577 92f77eae663e6901c456501070a44628 373 Gene3D G3DSA:3.75.10.10 31 373 4.4E-108 T 12-10-2018 PA257_4577 92f77eae663e6901c456501070a44628 373 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 41 369 6.7E-99 T 12-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PA257_4577 92f77eae663e6901c456501070a44628 373 SUPERFAMILY SSF55909 35 370 1.3E-110 T 12-10-2018 PA257_5730 70388df9ce4254339f46fd7e1e8bd501 1158 Pfam PF05567 Neisseria PilC beta-propeller domain 626 997 3.7E-150 T 12-10-2018 IPR008707 PilC beta-propeller domain PA257_5730 70388df9ce4254339f46fd7e1e8bd501 1158 Gene3D G3DSA:3.40.50.410 176 334 1.4E-5 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_5730 70388df9ce4254339f46fd7e1e8bd501 1158 SUPERFAMILY SSF50998 667 944 1.73E-8 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PA257_3985 6dc076ee8ead2c86dfef4f876fdecaee 192 SMART SM00448 2 113 2.6E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3985 6dc076ee8ead2c86dfef4f876fdecaee 192 SMART SM01012 129 184 2.3E-19 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 PA257_3985 6dc076ee8ead2c86dfef4f876fdecaee 192 PIRSF PIRSF036382 1 191 2.0E-66 T 12-10-2018 IPR008327 Signal transduction response regulator, antiterminator PA257_3985 6dc076ee8ead2c86dfef4f876fdecaee 192 Gene3D G3DSA:1.10.10.10 133 189 2.8E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3985 6dc076ee8ead2c86dfef4f876fdecaee 192 Pfam PF00072 Response regulator receiver domain 4 110 4.8E-9 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3985 6dc076ee8ead2c86dfef4f876fdecaee 192 Gene3D G3DSA:3.40.50.2300 1 130 4.1E-16 T 12-10-2018 PA257_3985 6dc076ee8ead2c86dfef4f876fdecaee 192 SUPERFAMILY SSF52172 1 184 1.57E-45 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3985 6dc076ee8ead2c86dfef4f876fdecaee 192 Pfam PF03861 ANTAR domain 133 184 1.5E-16 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 PA257_4422 81321b00a574ad4e8d0315e0b0cfd1eb 168 Pfam PF01638 HxlR-like helix-turn-helix 20 105 9.1E-19 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type PA257_4422 81321b00a574ad4e8d0315e0b0cfd1eb 168 SUPERFAMILY SSF46785 6 143 2.89E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4422 81321b00a574ad4e8d0315e0b0cfd1eb 168 Gene3D G3DSA:1.10.10.10 1 168 1.2E-54 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4521 d41bf577801f113ba133e8157b7f1b54 490 Gene3D G3DSA:3.40.50.300 6 243 3.4E-58 T 12-10-2018 PA257_4521 d41bf577801f113ba133e8157b7f1b54 490 Gene3D G3DSA:3.40.50.880 255 402 1.4E-16 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4521 d41bf577801f113ba133e8157b7f1b54 490 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 437 1.1E-58 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 PA257_4521 d41bf577801f113ba133e8157b7f1b54 490 SUPERFAMILY SSF52540 6 240 2.83E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4521 d41bf577801f113ba133e8157b7f1b54 490 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 478 1.9E-150 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 PA257_4521 d41bf577801f113ba133e8157b7f1b54 490 SUPERFAMILY SSF52317 254 447 5.77E-42 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4521 d41bf577801f113ba133e8157b7f1b54 490 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 488 216.338 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 PA257_4521 d41bf577801f113ba133e8157b7f1b54 490 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 2.4E-23 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PA257_3052 e5631e4a198d70e4d256584947472101 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 265 310 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_3052 e5631e4a198d70e4d256584947472101 318 Pfam PF12833 Helix-turn-helix domain 234 316 3.5E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3052 e5631e4a198d70e4d256584947472101 318 SUPERFAMILY SSF46689 215 262 6.45E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3052 e5631e4a198d70e4d256584947472101 318 SMART SM00342 228 314 1.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3052 e5631e4a198d70e4d256584947472101 318 SUPERFAMILY SSF51215 75 177 1.44E-6 T 12-10-2018 IPR037923 Transcription regulator HTH-like PA257_3052 e5631e4a198d70e4d256584947472101 318 Gene3D G3DSA:1.10.10.60 213 318 1.0E-30 T 12-10-2018 PA257_3052 e5631e4a198d70e4d256584947472101 318 Pfam PF14525 AraC-binding-like domain 25 192 6.3E-26 T 12-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like PA257_6353 b5e83c517d53f17f1fcfc70f9a0440e1 138 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 21 136 2.2E-42 T 12-10-2018 IPR008769 Poly granule associated PA257_6353 b5e83c517d53f17f1fcfc70f9a0440e1 138 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 13 135 1.7E-46 T 12-10-2018 IPR008769 Poly granule associated PA257_5129 ae152afab6898fbf9baddc8946df84f1 250 SUPERFAMILY SSF51182 13 179 7.97E-7 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_5129 ae152afab6898fbf9baddc8946df84f1 250 Gene3D G3DSA:1.10.10.60 151 206 2.1E-14 T 12-10-2018 PA257_5129 ae152afab6898fbf9baddc8946df84f1 250 Gene3D G3DSA:1.10.10.60 207 250 1.8E-12 T 12-10-2018 PA257_5129 ae152afab6898fbf9baddc8946df84f1 250 Pfam PF12833 Helix-turn-helix domain 171 249 6.4E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5129 ae152afab6898fbf9baddc8946df84f1 250 SMART SM00342 165 248 1.4E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5129 ae152afab6898fbf9baddc8946df84f1 250 SUPERFAMILY SSF46689 151 199 1.12E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5129 ae152afab6898fbf9baddc8946df84f1 250 SUPERFAMILY SSF46689 201 249 1.52E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6952 7f826ff64d732b7f122d2f7617d9c593 207 SUPERFAMILY SSF56784 17 198 5.15E-16 T 12-10-2018 IPR036412 HAD-like superfamily PA257_6952 7f826ff64d732b7f122d2f7617d9c593 207 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 16 197 1.7E-30 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like PA257_6952 7f826ff64d732b7f122d2f7617d9c593 207 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 15 197 1.5E-39 T 12-10-2018 PA257_6952 7f826ff64d732b7f122d2f7617d9c593 207 Gene3D G3DSA:1.20.1440.100 27 99 2.7E-26 T 12-10-2018 PA257_6952 7f826ff64d732b7f122d2f7617d9c593 207 Gene3D G3DSA:3.40.50.1000 16 198 2.7E-26 T 12-10-2018 IPR023214 HAD superfamily PA257_6952 7f826ff64d732b7f122d2f7617d9c593 207 Pfam PF12710 haloacid dehalogenase-like hydrolase 17 195 4.9E-25 T 12-10-2018 PA257_4326 538e13f6e621eaa8dc884aa3c06759db 323 PIRSF PIRSF016838 1 55 0.089 T 12-10-2018 IPR028349 Protein PafC PA257_4326 538e13f6e621eaa8dc884aa3c06759db 323 PIRSF PIRSF016838 64 320 1.9E-23 T 12-10-2018 IPR028349 Protein PafC PA257_4326 538e13f6e621eaa8dc884aa3c06759db 323 Pfam PF13280 WYL domain 142 311 7.6E-33 T 12-10-2018 IPR026881 WYL domain PA257_4326 538e13f6e621eaa8dc884aa3c06759db 323 Gene3D G3DSA:1.10.10.10 6 65 1.5E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4326 538e13f6e621eaa8dc884aa3c06759db 323 SUPERFAMILY SSF46785 7 64 1.22E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4326 538e13f6e621eaa8dc884aa3c06759db 323 Pfam PF08279 HTH domain 7 62 9.3E-16 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 PA257_2600 fa5aa99c536af413a27cc7734c596303 133 Pfam PF06271 RDD family 11 93 4.5E-12 T 12-10-2018 IPR010432 RDD PA257_4783 f9c358a4cdba2bdddc6ece461a40630c 157 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 2 129 28.087 T 12-10-2018 IPR023006 Uncharacterised protein family UPF0225 PA257_4783 f9c358a4cdba2bdddc6ece461a40630c 157 Gene3D G3DSA:3.10.450.50 2 156 1.1E-51 T 12-10-2018 PA257_4783 f9c358a4cdba2bdddc6ece461a40630c 157 SUPERFAMILY SSF54427 25 130 2.63E-33 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_4783 f9c358a4cdba2bdddc6ece461a40630c 157 SUPERFAMILY SSF103642 133 155 3.6E-7 T 12-10-2018 PA257_4783 f9c358a4cdba2bdddc6ece461a40630c 157 Pfam PF02810 SEC-C motif 6 20 3.1E-4 T 12-10-2018 IPR004027 SEC-C motif PA257_4783 f9c358a4cdba2bdddc6ece461a40630c 157 Pfam PF02810 SEC-C motif 136 154 4.2E-7 T 12-10-2018 IPR004027 SEC-C motif PA257_6269 16f3d796e01da531825cbe62c45446e7 258 Gene3D G3DSA:3.40.190.10 107 203 1.6E-20 T 12-10-2018 PA257_6269 16f3d796e01da531825cbe62c45446e7 258 SUPERFAMILY SSF53850 23 241 1.93E-35 T 12-10-2018 PA257_6269 16f3d796e01da531825cbe62c45446e7 258 Gene3D G3DSA:3.40.190.10 31 239 1.6E-20 T 12-10-2018 PA257_6269 16f3d796e01da531825cbe62c45446e7 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 238 3.1E-15 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6269 16f3d796e01da531825cbe62c45446e7 258 SMART SM00062 22 243 1.6E-10 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 SMART SM00382 342 512 7.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 SMART SM00382 28 227 4.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 SUPERFAMILY SSF52540 306 528 1.49E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 Gene3D G3DSA:3.40.50.300 3 276 2.3E-64 T 12-10-2018 PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 SUPERFAMILY SSF52540 3 233 2.8E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 Pfam PF00005 ABC transporter 334 467 8.4E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 Pfam PF12848 ABC transporter 221 299 4.1E-10 T 12-10-2018 IPR032781 ABC-transporter extension domain PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 Gene3D G3DSA:1.10.287.380 562 640 1.9E-22 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 Pfam PF16326 ABC transporter C-terminal domain 571 639 8.4E-19 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 Gene3D G3DSA:3.40.50.300 278 538 2.2E-66 T 12-10-2018 PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 Pfam PF00005 ABC transporter 19 182 2.7E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_2284 82232ec23a4482c52fffe6cf4c0b3e59 640 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3398 2de762efecac3b60197470f5438594d5 428 Gene3D G3DSA:2.40.50.100 3 86 4.2E-22 T 12-10-2018 PA257_3398 2de762efecac3b60197470f5438594d5 428 SUPERFAMILY SSF51230 3 96 8.38E-26 T 12-10-2018 IPR011053 Single hybrid motif PA257_3398 2de762efecac3b60197470f5438594d5 428 Pfam PF02817 e3 binding domain 139 173 2.1E-11 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 PA257_3398 2de762efecac3b60197470f5438594d5 428 Gene3D G3DSA:3.30.559.10 188 425 2.0E-81 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3398 2de762efecac3b60197470f5438594d5 428 Pfam PF00364 Biotin-requiring enzyme 5 76 6.6E-19 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_3398 2de762efecac3b60197470f5438594d5 428 Gene3D G3DSA:4.10.320.10 128 180 1.1E-15 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PA257_3398 2de762efecac3b60197470f5438594d5 428 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PA257_3398 2de762efecac3b60197470f5438594d5 428 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 198 426 1.2E-78 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 PA257_3398 2de762efecac3b60197470f5438594d5 428 SUPERFAMILY SSF52777 192 427 1.96E-78 T 12-10-2018 PA257_3398 2de762efecac3b60197470f5438594d5 428 SUPERFAMILY SSF47005 133 178 3.92E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PA257_5083 90442231639d15ab62bc8044c3443f0b 233 Pfam PF08774 VRR-NUC domain 125 178 5.1E-6 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 PA257_5083 90442231639d15ab62bc8044c3443f0b 233 SMART SM00990 75 189 4.5E-14 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 PA257_0333 858bc7eec70bb2f60d0a51805449e3a7 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 76 9.7E-17 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_0333 858bc7eec70bb2f60d0a51805449e3a7 145 Gene3D G3DSA:1.20.1290.10 1 145 3.1E-53 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_0333 858bc7eec70bb2f60d0a51805449e3a7 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 3.5E-23 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_0333 858bc7eec70bb2f60d0a51805449e3a7 145 SUPERFAMILY SSF69118 6 145 6.82E-49 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_1142 6414e273ebd149c7ad58761131855bdf 437 Pfam PF01569 PAP2 superfamily 285 397 5.0E-21 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PA257_1142 6414e273ebd149c7ad58761131855bdf 437 SUPERFAMILY SSF48317 207 418 1.03E-44 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PA257_1142 6414e273ebd149c7ad58761131855bdf 437 Gene3D G3DSA:1.20.144.10 311 406 9.5E-23 T 12-10-2018 PA257_1142 6414e273ebd149c7ad58761131855bdf 437 SMART SM00014 281 391 5.4E-16 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PA257_1142 6414e273ebd149c7ad58761131855bdf 437 Pfam PF09335 SNARE associated Golgi protein 37 160 2.6E-18 T 12-10-2018 IPR032816 SNARE associated Golgi protein PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 PIRSF PIRSF000429 1 401 7.6E-113 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 6.9E-130 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 Gene3D G3DSA:3.40.47.10 6 298 1.9E-140 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 Pfam PF00108 Thiolase, N-terminal domain 5 270 1.7E-45 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 Pfam PF02803 Thiolase, C-terminal domain 279 400 2.6E-47 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 SUPERFAMILY SSF53901 280 400 5.07E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 SUPERFAMILY SSF53901 3 278 1.1E-61 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PA257_4038 c8611daaed1c1c7c568ca65a9da56cd5 401 Gene3D G3DSA:3.40.47.10 125 396 1.9E-140 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4781 8347a15af8bb9bcc94ca00029d781475 210 PRINTS PR01021 OMPA domain signature 136 151 2.6E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_4781 8347a15af8bb9bcc94ca00029d781475 210 PRINTS PR01021 OMPA domain signature 151 167 2.6E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_4781 8347a15af8bb9bcc94ca00029d781475 210 PRINTS PR01021 OMPA domain signature 105 127 2.6E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_4781 8347a15af8bb9bcc94ca00029d781475 210 Gene3D G3DSA:3.30.1330.60 90 210 8.2E-40 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_4781 8347a15af8bb9bcc94ca00029d781475 210 SUPERFAMILY SSF103088 78 207 1.44E-35 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_4781 8347a15af8bb9bcc94ca00029d781475 210 Pfam PF00691 OmpA family 105 201 5.2E-24 T 12-10-2018 IPR006665 OmpA-like domain PA257_1509 8dd9b6c18cf4e83858c5cfd6126b1acd 231 Gene3D G3DSA:1.10.3680.10 104 230 2.2E-7 T 12-10-2018 IPR029024 TerB-like PA257_1509 8dd9b6c18cf4e83858c5cfd6126b1acd 231 Pfam PF04391 Protein of unknown function (DUF533) 41 223 2.5E-66 T 12-10-2018 IPR007486 Inner membrane protein YebE PA257_1509 8dd9b6c18cf4e83858c5cfd6126b1acd 231 SUPERFAMILY SSF158682 76 227 2.22E-22 T 12-10-2018 IPR029024 TerB-like PA257_4319 f6af109fcd57e416dc1c7cacfc207138 221 SMART SM00382 26 219 7.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4319 f6af109fcd57e416dc1c7cacfc207138 221 Pfam PF00005 ABC transporter 18 157 3.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4319 f6af109fcd57e416dc1c7cacfc207138 221 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 202 6.8E-84 T 12-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 PA257_4319 f6af109fcd57e416dc1c7cacfc207138 221 SUPERFAMILY SSF52540 3 188 1.11E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4319 f6af109fcd57e416dc1c7cacfc207138 221 Gene3D G3DSA:3.40.50.300 1 201 3.1E-44 T 12-10-2018 PA257_4319 f6af109fcd57e416dc1c7cacfc207138 221 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2761 c4adb1f7770b652e44f3f186ff73ffac 341 SMART SM00267 170 341 5.2E-50 T 12-10-2018 IPR000160 GGDEF domain PA257_2761 c4adb1f7770b652e44f3f186ff73ffac 341 SUPERFAMILY SSF55781 29 168 5.23E-26 T 12-10-2018 PA257_2761 c4adb1f7770b652e44f3f186ff73ffac 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 182 337 2.1E-42 T 12-10-2018 IPR000160 GGDEF domain PA257_2761 c4adb1f7770b652e44f3f186ff73ffac 341 Pfam PF01590 GAF domain 31 138 5.2E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_2761 c4adb1f7770b652e44f3f186ff73ffac 341 SUPERFAMILY SSF55073 186 339 7.45E-45 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_2761 c4adb1f7770b652e44f3f186ff73ffac 341 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 339 1.5E-45 T 12-10-2018 IPR000160 GGDEF domain PA257_2761 c4adb1f7770b652e44f3f186ff73ffac 341 Gene3D G3DSA:3.30.450.40 14 177 1.4E-17 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_2761 c4adb1f7770b652e44f3f186ff73ffac 341 SMART SM00065 26 168 1.2E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_2761 c4adb1f7770b652e44f3f186ff73ffac 341 Gene3D G3DSA:3.30.70.270 181 341 2.5E-54 T 12-10-2018 PA257_3924 f5a62b0a52e0c176dac67c880faace29 291 SUPERFAMILY SSF53474 3 265 1.97E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3924 f5a62b0a52e0c176dac67c880faace29 291 PIRSF PIRSF037442 2 287 1.2E-94 T 12-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 PA257_3924 f5a62b0a52e0c176dac67c880faace29 291 Gene3D G3DSA:3.40.50.1820 4 273 6.4E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3924 f5a62b0a52e0c176dac67c880faace29 291 Pfam PF12146 Serine aminopeptidase, S33 27 117 5.5E-12 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 PA257_4802 120267a46e9597ec79050aa3d8bc51c4 253 Gene3D G3DSA:3.90.226.10 2 198 6.1E-53 T 12-10-2018 PA257_4802 120267a46e9597ec79050aa3d8bc51c4 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 252 7.4E-51 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_4802 120267a46e9597ec79050aa3d8bc51c4 253 SUPERFAMILY SSF52096 4 252 1.89E-68 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_4802 120267a46e9597ec79050aa3d8bc51c4 253 Gene3D G3DSA:1.10.12.10 202 252 1.7E-12 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PA257_6262 c1d2ac955f216888b37fcc0521f4b397 536 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 176 1.8E-54 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PA257_6262 c1d2ac955f216888b37fcc0521f4b397 536 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PA257_6262 c1d2ac955f216888b37fcc0521f4b397 536 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 327 5.6E-26 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PA257_6262 c1d2ac955f216888b37fcc0521f4b397 536 SUPERFAMILY SSF52518 363 534 4.29E-42 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_6262 c1d2ac955f216888b37fcc0521f4b397 536 SUPERFAMILY SSF52467 161 354 1.19E-37 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_6262 c1d2ac955f216888b37fcc0521f4b397 536 Gene3D G3DSA:3.40.50.970 356 535 7.6E-40 T 12-10-2018 PA257_6262 c1d2ac955f216888b37fcc0521f4b397 536 Gene3D G3DSA:3.40.50.1220 191 354 5.7E-40 T 12-10-2018 PA257_6262 c1d2ac955f216888b37fcc0521f4b397 536 Gene3D G3DSA:3.40.50.970 1 189 7.9E-64 T 12-10-2018 PA257_6262 c1d2ac955f216888b37fcc0521f4b397 536 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 391 529 1.8E-27 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PA257_6262 c1d2ac955f216888b37fcc0521f4b397 536 SUPERFAMILY SSF52518 6 182 6.38E-53 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_5334 49022b3382dbbb3d22939cb0077cdc89 1024 Pfam PF02811 PHP domain 6 121 6.6E-18 T 12-10-2018 IPR004013 PHP domain GO:0003824 PA257_5334 49022b3382dbbb3d22939cb0077cdc89 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 4 1024 13.999 T 12-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_5334 49022b3382dbbb3d22939cb0077cdc89 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 968 2.9E-171 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_5334 49022b3382dbbb3d22939cb0077cdc89 1024 Gene3D G3DSA:3.20.20.140 1 245 6.5E-62 T 12-10-2018 PA257_5334 49022b3382dbbb3d22939cb0077cdc89 1024 SUPERFAMILY SSF89550 4 185 1.37E-10 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PA257_5334 49022b3382dbbb3d22939cb0077cdc89 1024 SMART SM00481 5 72 4.1E-10 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal PA257_5334 49022b3382dbbb3d22939cb0077cdc89 1024 Pfam PF14579 Helix-hairpin-helix motif 767 855 7.8E-22 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_5334 49022b3382dbbb3d22939cb0077cdc89 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 268 692 9.2E-148 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 42.642 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 PIRSF PIRSF001535 1 571 2.4E-271 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.3E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.3E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.3E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.3E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 Gene3D G3DSA:3.90.960.10 240 387 3.3E-242 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 SUPERFAMILY SSF55826 218 388 6.93E-29 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 Pfam PF03129 Anticodon binding domain 473 567 2.3E-16 T 12-10-2018 IPR004154 Anticodon-binding PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 Gene3D G3DSA:3.30.930.10 11 463 3.3E-242 T 12-10-2018 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 5.1E-53 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 SUPERFAMILY SSF52954 461 570 1.62E-28 T 12-10-2018 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 9.5E-255 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 Gene3D G3DSA:3.40.50.800 4 553 3.3E-242 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 375 7.7E-24 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PA257_4882 26de9a5899d996f54bf96ce94d5e508d 571 SUPERFAMILY SSF55681 10 476 7.01E-109 T 12-10-2018 PA257_2111 048468e5140744345719ee8744119c69 386 SUPERFAMILY SSF52540 4 245 5.9E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2111 048468e5140744345719ee8744119c69 386 SMART SM00382 30 213 1.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2111 048468e5140744345719ee8744119c69 386 Gene3D G3DSA:3.40.50.300 3 223 1.0E-67 T 12-10-2018 PA257_2111 048468e5140744345719ee8744119c69 386 Pfam PF03459 TOBE domain 297 353 6.7E-9 T 12-10-2018 IPR005116 Transport-associated OB, type 1 PA257_2111 048468e5140744345719ee8744119c69 386 SUPERFAMILY SSF50331 238 363 7.05E-26 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_2111 048468e5140744345719ee8744119c69 386 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2111 048468e5140744345719ee8744119c69 386 Pfam PF00005 ABC transporter 21 163 3.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_2111 048468e5140744345719ee8744119c69 386 Gene3D G3DSA:2.40.50.140 291 347 2.0E-31 T 12-10-2018 PA257_2111 048468e5140744345719ee8744119c69 386 Gene3D G3DSA:2.40.50.940 224 356 2.0E-31 T 12-10-2018 PA257_5097 a950285b7be2866dea9f99529d8391c4 438 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 30 404 4.8E-114 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5097 a950285b7be2866dea9f99529d8391c4 438 Pfam PF01566 Natural resistance-associated macrophage protein 52 409 3.4E-126 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5097 a950285b7be2866dea9f99529d8391c4 438 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 23 436 40.213 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5097 a950285b7be2866dea9f99529d8391c4 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 164 185 3.1E-59 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5097 a950285b7be2866dea9f99529d8391c4 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 320 339 3.1E-59 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5097 a950285b7be2866dea9f99529d8391c4 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 111 137 3.1E-59 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5097 a950285b7be2866dea9f99529d8391c4 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 380 399 3.1E-59 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5097 a950285b7be2866dea9f99529d8391c4 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 348 365 3.1E-59 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5097 a950285b7be2866dea9f99529d8391c4 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 139 158 3.1E-59 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_5097 a950285b7be2866dea9f99529d8391c4 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 216 239 3.1E-59 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PA257_1653 c8150e8d4ae8f84871969576d04789db 571 Gene3D G3DSA:3.40.50.150 81 344 2.8E-34 T 12-10-2018 PA257_1653 c8150e8d4ae8f84871969576d04789db 571 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 216 228 1.7E-18 T 12-10-2018 PA257_1653 c8150e8d4ae8f84871969576d04789db 571 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 247 271 1.7E-18 T 12-10-2018 PA257_1653 c8150e8d4ae8f84871969576d04789db 571 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 99 115 1.7E-18 T 12-10-2018 PA257_1653 c8150e8d4ae8f84871969576d04789db 571 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 127 141 1.7E-18 T 12-10-2018 PA257_1653 c8150e8d4ae8f84871969576d04789db 571 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 219 225 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_1653 c8150e8d4ae8f84871969576d04789db 571 Pfam PF02384 N-6 DNA Methylase 93 275 1.7E-9 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PA257_1653 c8150e8d4ae8f84871969576d04789db 571 SUPERFAMILY SSF53335 78 323 3.86E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 SUPERFAMILY SSF51126 164 465 5.36E-38 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 395 437 8.0E-7 T 12-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 Pfam PF05048 Periplasmic copper-binding protein (NosD) 288 438 6.0E-16 T 12-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 Gene3D G3DSA:2.160.20.10 77 499 1.3E-140 T 12-10-2018 IPR012334 Pectin lyase fold PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 SMART SM00710 283 304 2200.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 SMART SM00710 329 352 15.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 SMART SM00710 354 376 2200.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 SMART SM00710 401 423 7.2 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 SMART SM00710 243 270 220.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 SMART SM00710 305 327 81.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 SMART SM00710 378 400 110.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1738 2ee966c19945dbe0a303701e5729b4d7 543 SMART SM00722 262 422 9.3E-20 T 12-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 Gene3D G3DSA:2.40.50.230 355 457 5.3E-49 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 Gene3D G3DSA:3.55.50.10 98 189 4.5E-137 T 12-10-2018 PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 SUPERFAMILY SSF69255 365 452 3.92E-35 T 12-10-2018 PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 Pfam PF05954 Phage late control gene D protein (GPD) 29 330 3.3E-105 T 12-10-2018 PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 Gene3D G3DSA:2.30.110.50 14 333 4.5E-137 T 12-10-2018 PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 SUPERFAMILY SSF69349 580 723 7.85E-24 T 12-10-2018 PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 SUPERFAMILY SSF69349 442 607 4.55E-48 T 12-10-2018 PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 SUPERFAMILY SSF69279 189 363 6.8E-37 T 12-10-2018 PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 Gene3D G3DSA:3.30.1920.30 224 286 4.5E-137 T 12-10-2018 PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 529 552 2.4E-5 T 12-10-2018 IPR010609 Gp5, C-terminal PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 633 656 5.6E-5 T 12-10-2018 IPR010609 Gp5, C-terminal PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 9.9E-208 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 SUPERFAMILY SSF69279 11 184 7.65E-64 T 12-10-2018 PA257_0117 fc5bd388895d881b3edc74cf791eacc7 741 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 2.0E-213 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_0939 b8a7bca7ba60e8b0598d583b7c1c924f 435 Gene3D G3DSA:3.20.20.30 1 435 2.5E-109 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_0939 b8a7bca7ba60e8b0598d583b7c1c924f 435 PIRSF PIRSF000337 2 435 6.0E-150 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PA257_0939 b8a7bca7ba60e8b0598d583b7c1c924f 435 Pfam PF00296 Luciferase-like monooxygenase 34 387 3.9E-51 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_0939 b8a7bca7ba60e8b0598d583b7c1c924f 435 SUPERFAMILY SSF51679 4 433 1.44E-102 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_0939 b8a7bca7ba60e8b0598d583b7c1c924f 435 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 20 428 3.4E-109 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PA257_1946 f99206236d45e6b3459108c3d1d56208 304 Gene3D G3DSA:3.40.50.720 13 279 6.7E-69 T 12-10-2018 PA257_1946 f99206236d45e6b3459108c3d1d56208 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.1E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1946 f99206236d45e6b3459108c3d1d56208 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.1E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1946 f99206236d45e6b3459108c3d1d56208 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.1E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1946 f99206236d45e6b3459108c3d1d56208 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.1E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1946 f99206236d45e6b3459108c3d1d56208 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.1E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1946 f99206236d45e6b3459108c3d1d56208 304 Pfam PF00106 short chain dehydrogenase 14 204 5.4E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1946 f99206236d45e6b3459108c3d1d56208 304 SUPERFAMILY SSF51735 8 289 6.84E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6539 57072e28fefd984d1f3205f985869f85 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 26 4.4E-10 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PA257_6539 57072e28fefd984d1f3205f985869f85 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 160 268 6.8E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_6539 57072e28fefd984d1f3205f985869f85 596 Gene3D G3DSA:1.20.140.10 284 454 2.3E-46 T 12-10-2018 PA257_6539 57072e28fefd984d1f3205f985869f85 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 476 590 1.3E-29 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PA257_6539 57072e28fefd984d1f3205f985869f85 596 Gene3D G3DSA:1.10.540.10 34 157 9.7E-17 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_6539 57072e28fefd984d1f3205f985869f85 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 279 451 1.6E-23 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_6539 57072e28fefd984d1f3205f985869f85 596 SUPERFAMILY SSF47203 284 456 1.93E-46 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_6539 57072e28fefd984d1f3205f985869f85 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 45 155 8.1E-13 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_6539 57072e28fefd984d1f3205f985869f85 596 SUPERFAMILY SSF56645 39 276 9.95E-56 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_6539 57072e28fefd984d1f3205f985869f85 596 Gene3D G3DSA:2.40.110.10 158 283 1.5E-27 T 12-10-2018 PA257_2679 195e3772bb0c856fc8437c44d4ad5faf 312 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 309 1.4E-133 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 PA257_2679 195e3772bb0c856fc8437c44d4ad5faf 312 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 311 47.293 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 PA257_2679 195e3772bb0c856fc8437c44d4ad5faf 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PA257_2679 195e3772bb0c856fc8437c44d4ad5faf 312 Gene3D G3DSA:3.20.20.70 1 234 6.2E-68 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2679 195e3772bb0c856fc8437c44d4ad5faf 312 SUPERFAMILY SSF51395 1 305 2.7E-68 T 12-10-2018 PA257_2679 195e3772bb0c856fc8437c44d4ad5faf 312 Pfam PF01207 Dihydrouridine synthase (Dus) 1 291 1.0E-79 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PA257_2679 195e3772bb0c856fc8437c44d4ad5faf 312 Gene3D G3DSA:1.20.120.1460 238 312 3.7E-16 T 12-10-2018 PA257_2679 195e3772bb0c856fc8437c44d4ad5faf 312 PIRSF PIRSF006621 1 310 3.7E-69 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PA257_6240 4ae51ef23ca959cfcf427c718c46f8ba 289 Pfam PF02666 Phosphatidylserine decarboxylase 65 283 3.5E-60 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 PA257_6240 4ae51ef23ca959cfcf427c718c46f8ba 289 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 12 287 50.31 T 12-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 PA257_6240 4ae51ef23ca959cfcf427c718c46f8ba 289 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 51 285 7.2E-80 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 PA257_5159 1f154bb22787ad51fc93806b771c0530 345 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 164 3.9E-37 T 12-10-2018 IPR017516 AbrB duplication PA257_5159 1f154bb22787ad51fc93806b771c0530 345 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 184 340 5.5E-38 T 12-10-2018 IPR017516 AbrB duplication PA257_5159 1f154bb22787ad51fc93806b771c0530 345 PIRSF PIRSF038991 3 345 2.3E-67 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 PA257_5159 1f154bb22787ad51fc93806b771c0530 345 Pfam PF05145 Transition state regulatory protein AbrB 33 340 3.1E-83 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Pfam PF02824 TGS domain 416 475 7.3E-22 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Pfam PF13328 HD domain 40 202 6.3E-46 T 12-10-2018 IPR003607 HD/PDEase domain PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 69 742 1.6E-189 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Gene3D G3DSA:3.10.20.30 409 482 2.5E-31 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 SUPERFAMILY SSF109604 18 218 1.79E-49 T 12-10-2018 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 SUPERFAMILY SSF81271 407 475 5.01E-22 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Pfam PF13291 ACT domain 666 743 2.5E-19 T 12-10-2018 IPR002912 ACT domain PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 SMART SM00954 262 372 3.9E-66 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 SUPERFAMILY SSF81301 207 420 2.62E-63 T 12-10-2018 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Gene3D G3DSA:1.10.3210.10 13 218 1.1E-45 T 12-10-2018 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Pfam PF04607 Region found in RelA / SpoT proteins 262 370 7.2E-38 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 SUPERFAMILY SSF55021 667 743 5.0E-15 T 12-10-2018 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Gene3D G3DSA:3.30.70.260 666 746 4.3E-18 T 12-10-2018 PA257_4906 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Gene3D G3DSA:3.30.460.10 220 352 5.1E-51 T 12-10-2018 PA257_1595 fb677784bfa2900dfb51cb2caf66ad4e 355 Gene3D G3DSA:3.30.2350.20 21 340 2.4E-107 T 12-10-2018 PA257_1595 fb677784bfa2900dfb51cb2caf66ad4e 355 Gene3D G3DSA:3.30.2340.10 172 304 2.4E-107 T 12-10-2018 PA257_1595 fb677784bfa2900dfb51cb2caf66ad4e 355 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 23 172 7.8E-38 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_1595 fb677784bfa2900dfb51cb2caf66ad4e 355 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 191 340 1.6E-17 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_1595 fb677784bfa2900dfb51cb2caf66ad4e 355 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 81 94 - T 12-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 PA257_1595 fb677784bfa2900dfb51cb2caf66ad4e 355 SUPERFAMILY SSF55120 13 342 1.58E-94 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_1595 fb677784bfa2900dfb51cb2caf66ad4e 355 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 9 345 27.054 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5296 2a2f42bf1e4681ad7f5627a5ee350223 206 Gene3D G3DSA:2.160.10.10 22 206 1.3E-53 T 12-10-2018 PA257_5296 2a2f42bf1e4681ad7f5627a5ee350223 206 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 141 1.2E-8 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_5296 2a2f42bf1e4681ad7f5627a5ee350223 206 SUPERFAMILY SSF51161 55 202 9.56E-41 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_4472 2ed90014999ce20ee8b6aa3b61d05dbd 110 Pfam PF05957 Bacterial protein of unknown function (DUF883) 19 109 1.2E-24 T 12-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 PA257_5737 5ebe43276891a00bd1bc59cb5f70b5a5 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 305 6.0E-97 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 PA257_5737 5ebe43276891a00bd1bc59cb5f70b5a5 312 Gene3D G3DSA:3.40.50.620 1 186 2.5E-61 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_5737 5ebe43276891a00bd1bc59cb5f70b5a5 312 SUPERFAMILY SSF82114 174 306 1.46E-43 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 PA257_5737 5ebe43276891a00bd1bc59cb5f70b5a5 312 SMART SM00904 183 307 8.6E-60 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 PA257_5737 5ebe43276891a00bd1bc59cb5f70b5a5 312 SUPERFAMILY SSF52374 17 175 2.0E-31 T 12-10-2018 PA257_5737 5ebe43276891a00bd1bc59cb5f70b5a5 312 PIRSF PIRSF004491 1 310 1.7E-103 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 PA257_5737 5ebe43276891a00bd1bc59cb5f70b5a5 312 Gene3D G3DSA:2.40.30.30 188 309 3.7E-40 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 PA257_5737 5ebe43276891a00bd1bc59cb5f70b5a5 312 Pfam PF06574 FAD synthetase 15 167 2.1E-54 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 PA257_5737 5ebe43276891a00bd1bc59cb5f70b5a5 312 Pfam PF01687 Riboflavin kinase 184 305 4.2E-36 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 PA257_5832 7ab95af64c178f982a7cc812d3cfb40c 205 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 201 41.125 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PA257_5832 7ab95af64c178f982a7cc812d3cfb40c 205 Gene3D G3DSA:3.40.50.2020 1 201 5.8E-62 T 12-10-2018 PA257_5832 7ab95af64c178f982a7cc812d3cfb40c 205 Pfam PF14681 Uracil phosphoribosyltransferase 7 200 3.6E-55 T 12-10-2018 PA257_5832 7ab95af64c178f982a7cc812d3cfb40c 205 SUPERFAMILY SSF53271 3 199 1.85E-57 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like PA257_5832 7ab95af64c178f982a7cc812d3cfb40c 205 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 201 8.0E-80 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PA257_4410 ba174abb134f1101d3b95712a32631cf 327 Gene3D G3DSA:3.40.50.300 5 167 5.9E-25 T 12-10-2018 PA257_4410 ba174abb134f1101d3b95712a32631cf 327 Gene3D G3DSA:2.70.50.60 168 307 3.8E-10 T 12-10-2018 PA257_4410 ba174abb134f1101d3b95712a32631cf 327 SUPERFAMILY SSF52540 8 140 7.69E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4410 ba174abb134f1101d3b95712a32631cf 327 Pfam PF14524 Wzt C-terminal domain 174 309 1.4E-19 T 12-10-2018 IPR029439 Wzt, C-terminal PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 SUPERFAMILY SSF53686 11 355 4.98E-109 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 SUPERFAMILY SSF55021 327 413 2.01E-28 T 12-10-2018 PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 SUPERFAMILY SSF55021 410 503 3.89E-26 T 12-10-2018 PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 Gene3D G3DSA:3.40.50.1100 50 146 3.6E-139 T 12-10-2018 PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 415 503 1.6E-21 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 409 2.4E-25 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 306 3.8E-85 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 Gene3D G3DSA:3.40.50.1100 14 317 3.6E-139 T 12-10-2018 PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 Gene3D G3DSA:3.40.1020.10 328 504 5.5E-73 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PA257_0402 522aebce9fb53c0de3e05eb6a5042648 504 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 503 7.7E-246 T 12-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PA257_0027 695663afdf899e97dc9886caf1b913e1 314 SUPERFAMILY SSF50486 208 308 5.3E-31 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 PA257_0027 695663afdf899e97dc9886caf1b913e1 314 SUPERFAMILY SSF53328 5 210 4.32E-67 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_0027 695663afdf899e97dc9886caf1b913e1 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_0027 695663afdf899e97dc9886caf1b913e1 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 305 37.043 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 PA257_0027 695663afdf899e97dc9886caf1b913e1 314 Pfam PF02911 Formyl transferase, C-terminal domain 207 302 1.2E-25 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_0027 695663afdf899e97dc9886caf1b913e1 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 306 4.5E-95 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 PA257_0027 695663afdf899e97dc9886caf1b913e1 314 Gene3D G3DSA:3.40.50.170 1 209 1.5E-81 T 12-10-2018 PA257_0027 695663afdf899e97dc9886caf1b913e1 314 Gene3D G3DSA:3.10.25.10 210 312 1.3E-28 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_0027 695663afdf899e97dc9886caf1b913e1 314 Pfam PF00551 Formyl transferase 6 184 4.8E-47 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_0727 464f0a183fbd7290eff9f75ab1766079 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 39 5.0E-7 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0727 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.1E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0727 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.1E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0727 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.1E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0727 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.1E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0727 464f0a183fbd7290eff9f75ab1766079 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.389 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0727 464f0a183fbd7290eff9f75ab1766079 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0727 464f0a183fbd7290eff9f75ab1766079 71 Gene3D G3DSA:1.20.5.1150 16 54 2.0E-21 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0727 464f0a183fbd7290eff9f75ab1766079 71 Pfam PF01165 Ribosomal protein S21 4 56 2.0E-22 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0727 464f0a183fbd7290eff9f75ab1766079 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.6E-25 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2395 dd3aae4442b57ced5d39154a26706b09 288 Pfam PF00753 Metallo-beta-lactamase superfamily 14 205 1.8E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_2395 dd3aae4442b57ced5d39154a26706b09 288 Gene3D G3DSA:3.60.15.10 3 288 1.2E-111 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_2395 dd3aae4442b57ced5d39154a26706b09 288 SMART SM00849 15 205 3.5E-24 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_2395 dd3aae4442b57ced5d39154a26706b09 288 SUPERFAMILY SSF56281 8 253 4.6E-51 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_3751 4950aa16fcd260709a77e839793b7a53 92 Gene3D G3DSA:1.10.10.1150 1 91 9.5E-27 T 12-10-2018 PA257_3751 4950aa16fcd260709a77e839793b7a53 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 10 90 3.7E-36 T 12-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 PA257_3751 4950aa16fcd260709a77e839793b7a53 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 4 91 26.775 T 12-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 PA257_3751 4950aa16fcd260709a77e839793b7a53 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 26 88 1.2E-15 T 12-10-2018 IPR008792 Coenzyme PQQ synthesis D PA257_6554 fecfd159afe09260cc85e26e548bc568 129 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 126 4.1E-23 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PA257_6554 fecfd159afe09260cc85e26e548bc568 129 SUPERFAMILY SSF54637 10 128 1.39E-35 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6554 fecfd159afe09260cc85e26e548bc568 129 Pfam PF03061 Thioesterase superfamily 44 119 2.6E-21 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_6554 fecfd159afe09260cc85e26e548bc568 129 Gene3D G3DSA:3.10.129.10 1 129 4.3E-54 T 12-10-2018 PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1105 1168 1.1E-23 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 Pfam PF03527 RHS protein 1065 1101 1.9E-14 T 12-10-2018 IPR001826 RHS protein PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 Pfam PF05593 RHS Repeat 636 671 3.7E-6 T 12-10-2018 IPR031325 RHS repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 Pfam PF05593 RHS Repeat 489 524 4.5E-8 T 12-10-2018 IPR031325 RHS repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 Pfam PF05593 RHS Repeat 531 566 1.8E-6 T 12-10-2018 IPR031325 RHS repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 Pfam PF05593 RHS Repeat 927 965 6.9E-5 T 12-10-2018 IPR031325 RHS repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 Pfam PF05593 RHS Repeat 595 630 3.1E-6 T 12-10-2018 IPR031325 RHS repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 Gene3D G3DSA:3.90.930.1 475 617 5.5E-7 T 12-10-2018 PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 367 399 7.5E-5 T 12-10-2018 IPR006530 YD repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 381 415 9.9E-5 T 12-10-2018 IPR006530 YD repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 594 634 2.1E-7 T 12-10-2018 IPR006530 YD repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 636 669 8.9E-7 T 12-10-2018 IPR006530 YD repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 489 528 5.9E-7 T 12-10-2018 IPR006530 YD repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 531 570 3.2E-8 T 12-10-2018 IPR006530 YD repeat PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 PRINTS PR00394 RHS protein signature 1112 1132 3.0E-15 T 12-10-2018 IPR001826 RHS protein PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 PRINTS PR00394 RHS protein signature 1059 1079 3.0E-15 T 12-10-2018 IPR001826 RHS protein PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 PRINTS PR00394 RHS protein signature 1135 1154 3.0E-15 T 12-10-2018 IPR001826 RHS protein PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 Gene3D G3DSA:2.180.10.10 620 732 1.7E-5 T 12-10-2018 PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 Gene3D G3DSA:2.180.10.10 813 1168 2.2E-33 T 12-10-2018 PA257_2867 b07478c9af359d94efea87ae404cbcb4 1317 SUPERFAMILY SSF69322 473 730 3.66E-5 T 12-10-2018 PA257_6674 3be2334bc85bd197ac0ae6f05198d6eb 154 Pfam PF01078 Magnesium chelatase, subunit ChlI 1 47 5.7E-17 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain PA257_6674 3be2334bc85bd197ac0ae6f05198d6eb 154 SUPERFAMILY SSF52540 27 149 7.21E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6674 3be2334bc85bd197ac0ae6f05198d6eb 154 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 59 149 9.0E-27 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain PA257_6674 3be2334bc85bd197ac0ae6f05198d6eb 154 Gene3D G3DSA:3.40.50.300 1 154 3.7E-15 T 12-10-2018 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 4.1E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 4.1E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 4.1E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 4.1E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 4.1E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 Gene3D G3DSA:3.30.980.10 561 696 2.9E-52 T 12-10-2018 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 SUPERFAMILY SSF55186 550 706 7.59E-52 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 SUPERFAMILY SSF55681 2 253 7.46E-107 T 12-10-2018 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 SUPERFAMILY SSF101353 254 452 6.02E-63 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 695 4.3E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 Gene3D G3DSA:3.30.54.20 622 676 2.9E-52 T 12-10-2018 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 Gene3D G3DSA:2.40.30.130 473 550 1.1E-11 T 12-10-2018 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 Gene3D G3DSA:3.10.310.40 763 871 7.4E-30 T 12-10-2018 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 Pfam PF01411 tRNA synthetases class II (A) 5 552 1.1E-228 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 Pfam PF02272 DHHA1 domain 732 870 1.9E-27 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 209.069 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 SMART SM00863 651 695 8.2E-23 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 Gene3D G3DSA:3.30.930.10 1 250 3.5E-122 T 12-10-2018 PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 SUPERFAMILY SSF50447 452 550 1.24E-19 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_4942 9dfb55031ca8e4677f66ab96768aaaac 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PA257_2188 fb2c5dfe1b19287cf44507511e221891 501 Gene3D G3DSA:3.40.50.2020 277 440 1.6E-150 T 12-10-2018 PA257_2188 fb2c5dfe1b19287cf44507511e221891 501 Pfam PF00156 Phosphoribosyl transferase domain 276 393 5.5E-9 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PA257_2188 fb2c5dfe1b19287cf44507511e221891 501 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.742 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PA257_2188 fb2c5dfe1b19287cf44507511e221891 501 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 1.0E-161 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PA257_2188 fb2c5dfe1b19287cf44507511e221891 501 SUPERFAMILY SSF53271 250 483 1.27E-70 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like PA257_2188 fb2c5dfe1b19287cf44507511e221891 501 Gene3D G3DSA:3.60.20.10 2 412 1.6E-150 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_2188 fb2c5dfe1b19287cf44507511e221891 501 PIRSF PIRSF000485 1 481 6.5E-159 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PA257_2188 fb2c5dfe1b19287cf44507511e221891 501 SUPERFAMILY SSF56235 2 257 4.55E-70 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_2188 fb2c5dfe1b19287cf44507511e221891 501 Pfam PF13522 Glutamine amidotransferase domain 64 208 5.4E-15 T 12-10-2018 PA257_2470 e9d0d91273d68c9327599a895f0efcea 448 Pfam PF01474 Class-II DAHP synthetase family 5 440 7.2E-208 T 12-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PA257_2470 e9d0d91273d68c9327599a895f0efcea 448 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 447 5.2E-223 T 12-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PA257_2470 e9d0d91273d68c9327599a895f0efcea 448 Gene3D G3DSA:3.20.20.70 177 445 1.8E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2470 e9d0d91273d68c9327599a895f0efcea 448 SUPERFAMILY SSF51569 2 444 1.1E-205 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SUPERFAMILY SSF52777 1553 1779 1.33E-38 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SUPERFAMILY SSF53335 917 1151 5.31E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SUPERFAMILY SSF53474 1874 2111 1.42E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 ProSitePatterns PS00455 Putative AMP-binding domain signature. 593 604 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SUPERFAMILY SSF47336 1250 1321 3.14E-16 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Gene3D G3DSA:1.10.1200.10 1782 1861 8.5E-8 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Gene3D G3DSA:3.30.559.10 9 181 3.5E-6 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SUPERFAMILY SSF52777 201 418 2.67E-9 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SMART SM00823 Phosphopantetheine attachment site 1792 1843 0.11 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SMART SM00823 Phosphopantetheine attachment site 1257 1325 0.0065 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Gene3D G3DSA:1.10.1200.10 1248 1326 3.7E-21 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 477 872 8.7E-103 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Gene3D G3DSA:3.30.559.30 1553 1781 8.0E-37 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Gene3D G3DSA:3.40.50.12780 441 841 2.4E-104 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Gene3D G3DSA:3.30.300.30 1158 1239 1.0E-11 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Gene3D G3DSA:3.30.559.30 200 438 5.8E-9 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Gene3D G3DSA:3.30.300.30 842 934 3.3E-13 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Pfam PF05050 Methyltransferase FkbM domain 950 1147 1.9E-13 T 12-10-2018 IPR006342 Methyltransferase FkbM PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SUPERFAMILY SSF56801 414 1269 1.83E-122 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Gene3D G3DSA:3.40.50.1820 1867 2113 1.3E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Pfam PF00668 Condensation domain 1359 1781 1.6E-53 T 12-10-2018 IPR001242 Condensation domain PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SUPERFAMILY SSF47336 1792 1854 2.49E-6 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SUPERFAMILY SSF52777 21 192 2.45E-10 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SUPERFAMILY SSF52777 1355 1561 7.67E-39 T 12-10-2018 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Pfam PF00975 Thioesterase domain 1887 2107 1.2E-32 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 SMART SM00824 Thioesterase 1889 2111 1.6E-4 T 12-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Gene3D G3DSA:3.30.559.10 1352 1552 1.6E-45 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1815 1830 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Pfam PF00501 AMP-binding enzyme 456 847 4.2E-77 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 947 1122 4.3E-28 T 12-10-2018 IPR006342 Methyltransferase FkbM PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Pfam PF00550 Phosphopantetheine attachment site 1794 1855 3.1E-5 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3342 b4043a316c8a21343acfcb88a0c333ba 2125 Pfam PF00550 Phosphopantetheine attachment site 1259 1321 3.0E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_4494 1a403aff651ba0a0e76a82afce4399ec 187 ProSitePatterns PS00761 Signal peptidases I signature 3. 143 156 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 PA257_4494 1a403aff651ba0a0e76a82afce4399ec 187 Pfam PF00717 Peptidase S24-like 43 112 1.2E-18 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_4494 1a403aff651ba0a0e76a82afce4399ec 187 SUPERFAMILY SSF51306 38 178 4.92E-55 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_4494 1a403aff651ba0a0e76a82afce4399ec 187 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 34 177 2.0E-51 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PA257_4494 1a403aff651ba0a0e76a82afce4399ec 187 ProSitePatterns PS00760 Signal peptidases I lysine active site. 91 103 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 PA257_4494 1a403aff651ba0a0e76a82afce4399ec 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 37 53 2.9E-20 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PA257_4494 1a403aff651ba0a0e76a82afce4399ec 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 89 101 2.9E-20 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PA257_4494 1a403aff651ba0a0e76a82afce4399ec 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 138 157 2.9E-20 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PA257_3005 f93b0af714c726a130cd43f3fcbdd345 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 504 9.6E-45 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_3005 f93b0af714c726a130cd43f3fcbdd345 538 Gene3D G3DSA:1.10.287.950 209 538 6.9E-78 T 12-10-2018 PA257_3005 f93b0af714c726a130cd43f3fcbdd345 538 SMART SM00283 276 537 3.1E-81 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_3005 f93b0af714c726a130cd43f3fcbdd345 538 SMART SM00304 296 356 13.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_3005 f93b0af714c726a130cd43f3fcbdd345 538 SMART SM00304 209 261 1.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_3005 f93b0af714c726a130cd43f3fcbdd345 538 SUPERFAMILY SSF58104 229 537 1.31E-78 T 12-10-2018 PA257_3005 f93b0af714c726a130cd43f3fcbdd345 538 Pfam PF00672 HAMP domain 209 248 3.6E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_3005 f93b0af714c726a130cd43f3fcbdd345 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 3.0E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_3005 f93b0af714c726a130cd43f3fcbdd345 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 3.0E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2038 20f19b1c824fe3c2c92cc5b0433987f8 269 SUPERFAMILY SSF53649 2 255 1.12E-49 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_2038 20f19b1c824fe3c2c92cc5b0433987f8 269 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 210 8.3E-16 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 PA257_2038 20f19b1c824fe3c2c92cc5b0433987f8 269 Gene3D G3DSA:3.40.720.10 2 254 7.4E-32 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_6274 8b94033fdae1c53cbe391dc5d1185f3b 648 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 339 2.4E-57 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PA257_6274 8b94033fdae1c53cbe391dc5d1185f3b 648 SUPERFAMILY SSF51905 363 648 3.5E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6274 8b94033fdae1c53cbe391dc5d1185f3b 648 Gene3D G3DSA:3.50.50.60 481 605 3.9E-69 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6274 8b94033fdae1c53cbe391dc5d1185f3b 648 Gene3D G3DSA:3.40.50.720 386 641 3.9E-69 T 12-10-2018 PA257_6274 8b94033fdae1c53cbe391dc5d1185f3b 648 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 385 614 1.4E-10 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_6274 8b94033fdae1c53cbe391dc5d1185f3b 648 SUPERFAMILY SSF51395 2 368 2.16E-94 T 12-10-2018 PA257_6274 8b94033fdae1c53cbe391dc5d1185f3b 648 Gene3D G3DSA:3.20.20.70 1 381 4.0E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_6274 8b94033fdae1c53cbe391dc5d1185f3b 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 487 1.8E-7 T 12-10-2018 PA257_6274 8b94033fdae1c53cbe391dc5d1185f3b 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 387 406 1.8E-7 T 12-10-2018 PA257_4575 791b29b0beeb5308c9524288b0c32d97 200 Gene3D G3DSA:1.10.357.10 7 200 1.7E-24 T 12-10-2018 PA257_4575 791b29b0beeb5308c9524288b0c32d97 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 1.9E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4575 791b29b0beeb5308c9524288b0c32d97 200 SUPERFAMILY SSF46689 10 84 1.85E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4575 791b29b0beeb5308c9524288b0c32d97 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 4.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4575 791b29b0beeb5308c9524288b0c32d97 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 4.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_5726 6553b18a4ba18d54585ed269dcb741f6 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5726 6553b18a4ba18d54585ed269dcb741f6 162 Gene3D G3DSA:3.55.40.10 32 162 1.0E-44 T 12-10-2018 PA257_5726 6553b18a4ba18d54585ed269dcb741f6 162 SUPERFAMILY SSF54523 10 130 1.41E-18 T 12-10-2018 PA257_5726 6553b18a4ba18d54585ed269dcb741f6 162 Pfam PF12019 Type II transport protein GspH 45 147 1.7E-13 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PA257_5726 6553b18a4ba18d54585ed269dcb741f6 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 4.1E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5726 6553b18a4ba18d54585ed269dcb741f6 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 7.8E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 Gene3D G3DSA:3.30.420.40 1 191 8.1E-69 T 12-10-2018 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 SUPERFAMILY SSF53067 5 192 5.83E-65 T 12-10-2018 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 Hamap MF_00020 Acetate kinase [ackA]. 1 394 169.52 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PIRSF PIRSF000722 2 394 3.3E-131 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 Gene3D G3DSA:3.30.420.40 195 394 8.6E-70 T 12-10-2018 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 6 17 6.4E-43 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 374 386 6.4E-43 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 200 221 6.4E-43 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 170 183 6.4E-43 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 319 335 6.4E-43 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 297 310 6.4E-43 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 SUPERFAMILY SSF53067 153 393 1.11E-82 T 12-10-2018 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 TIGRFAM TIGR00016 ackA: acetate kinase 3 392 5.2E-133 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_5015 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 Pfam PF00871 Acetokinase family 6 386 4.1E-133 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PA257_6828 15761f598bef62f54ad68a2f894b2066 491 Gene3D G3DSA:1.10.10.10 12 90 6.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6828 15761f598bef62f54ad68a2f894b2066 491 Gene3D G3DSA:3.40.640.10 114 473 3.6E-121 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6828 15761f598bef62f54ad68a2f894b2066 491 SMART SM00345 24 83 5.4E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6828 15761f598bef62f54ad68a2f894b2066 491 SUPERFAMILY SSF46785 15 92 2.4E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6828 15761f598bef62f54ad68a2f894b2066 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 6.5E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6828 15761f598bef62f54ad68a2f894b2066 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 6.5E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6828 15761f598bef62f54ad68a2f894b2066 491 SUPERFAMILY SSF53383 119 480 5.62E-86 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6828 15761f598bef62f54ad68a2f894b2066 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 7.9E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6828 15761f598bef62f54ad68a2f894b2066 491 Pfam PF00155 Aminotransferase class I and II 149 417 4.4E-16 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 SUPERFAMILY SSF47384 185 266 2.75E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 Gene3D G3DSA:1.10.287.130 166 265 2.8E-13 T 12-10-2018 PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 3.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 3.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 3.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 Gene3D G3DSA:3.40.50.2300 443 563 3.7E-18 T 12-10-2018 PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 SUPERFAMILY SSF55874 257 422 1.01E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 Gene3D G3DSA:3.30.565.10 274 424 1.1E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 SMART SM00388 202 267 2.2E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 Pfam PF13188 PAS domain 44 91 2.4E-4 T 12-10-2018 IPR000014 PAS domain PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 SMART SM00448 445 557 2.0E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 312 420 6.2E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 SMART SM00387 311 422 1.2E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 Gene3D G3DSA:3.30.450.20 39 156 6.3E-13 T 12-10-2018 PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 SUPERFAMILY SSF55785 30 155 2.27E-12 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 SUPERFAMILY SSF52172 443 562 4.41E-21 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 164 2.5E-10 T 12-10-2018 IPR000014 PAS domain PA257_3747 a1c0bad93fe2047ad63f62066be53f7a 564 Pfam PF00072 Response regulator receiver domain 448 557 1.1E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4902 e61a367cd9db5007dd4c1d433771531b 442 Pfam PF02706 Chain length determinant protein 13 72 1.2E-12 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 PA257_4902 e61a367cd9db5007dd4c1d433771531b 442 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 415 5.2E-9 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain PA257_4902 e61a367cd9db5007dd4c1d433771531b 442 SUPERFAMILY SSF160355 221 332 2.09E-14 T 12-10-2018 PA257_4902 e61a367cd9db5007dd4c1d433771531b 442 SUPERFAMILY SSF160355 72 220 3.53E-11 T 12-10-2018 PA257_5562 fbbef7292287b7290c8316a577468834 186 SMART SM00448 13 124 5.3E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5562 fbbef7292287b7290c8316a577468834 186 Gene3D G3DSA:1.10.10.60 129 184 3.0E-24 T 12-10-2018 PA257_5562 fbbef7292287b7290c8316a577468834 186 SUPERFAMILY SSF52172 13 171 7.97E-33 T 12-10-2018 IPR011006 CheY-like superfamily PA257_5562 fbbef7292287b7290c8316a577468834 186 Gene3D G3DSA:3.40.50.2300 14 128 3.3E-29 T 12-10-2018 PA257_5562 fbbef7292287b7290c8316a577468834 186 Pfam PF02954 Bacterial regulatory protein, Fis family 148 181 8.0E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_5562 fbbef7292287b7290c8316a577468834 186 Pfam PF00072 Response regulator receiver domain 16 124 4.7E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5562 fbbef7292287b7290c8316a577468834 186 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 148 165 2.6E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_5562 fbbef7292287b7290c8316a577468834 186 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 165 185 2.6E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4710 3e274bebeef7fe230f9844fbea2dc6cd 451 SUPERFAMILY SSF52540 103 372 2.08E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4710 3e274bebeef7fe230f9844fbea2dc6cd 451 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 155 366 6.3E-74 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_4710 3e274bebeef7fe230f9844fbea2dc6cd 451 Gene3D G3DSA:3.40.50.12240 23 448 6.5E-158 T 12-10-2018 PA257_4710 3e274bebeef7fe230f9844fbea2dc6cd 451 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_4710 3e274bebeef7fe230f9844fbea2dc6cd 451 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 444 1.5E-194 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_4710 3e274bebeef7fe230f9844fbea2dc6cd 451 SMART SM00382 167 350 6.9E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4710 3e274bebeef7fe230f9844fbea2dc6cd 451 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 27 446 1.1E-171 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6744 23b1e8a15e9752aba69f812115076c5c 251 SUPERFAMILY SSF46785 3 73 5.74E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6744 23b1e8a15e9752aba69f812115076c5c 251 SMART SM00895 94 225 5.0E-26 T 12-10-2018 IPR011711 GntR, C-terminal PA257_6744 23b1e8a15e9752aba69f812115076c5c 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.9E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6744 23b1e8a15e9752aba69f812115076c5c 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.9E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6744 23b1e8a15e9752aba69f812115076c5c 251 Gene3D G3DSA:1.20.120.530 78 240 1.0E-32 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_6744 23b1e8a15e9752aba69f812115076c5c 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 2.7E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6744 23b1e8a15e9752aba69f812115076c5c 251 SUPERFAMILY SSF48008 91 232 1.83E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_6744 23b1e8a15e9752aba69f812115076c5c 251 Gene3D G3DSA:1.10.10.10 1 75 1.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6744 23b1e8a15e9752aba69f812115076c5c 251 Pfam PF07729 FCD domain 94 224 5.3E-26 T 12-10-2018 IPR011711 GntR, C-terminal PA257_6744 23b1e8a15e9752aba69f812115076c5c 251 SMART SM00345 10 69 5.8E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 SUPERFAMILY SSF56042 430 612 8.67E-54 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 966 2.3E-15 T 12-10-2018 IPR010918 PurM-like, C-terminal domain PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 430 586 6.0E-31 T 12-10-2018 IPR010918 PurM-like, C-terminal domain PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 Gene3D G3DSA:3.30.1330.10 212 394 1.4E-19 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 Gene3D G3DSA:1.10.8.750 151 211 2.6E-28 T 12-10-2018 PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 SUPERFAMILY SSF109736 153 218 1.96E-21 T 12-10-2018 PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 Gene3D G3DSA:3.90.650.10 810 983 5.8E-33 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1042 1297 4.4E-106 T 12-10-2018 PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1297 0.0 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1298 21.373 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 SMART SM01211 1042 1297 5.9E-155 T 12-10-2018 PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 SUPERFAMILY SSF55326 622 814 2.33E-67 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 Gene3D G3DSA:3.90.650.10 395 613 1.6E-63 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 SUPERFAMILY SSF56042 823 1036 5.08E-56 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 SUPERFAMILY SSF55326 219 426 2.23E-63 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 SUPERFAMILY SSF82697 1 150 1.99E-47 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 Gene3D G3DSA:3.30.1330.10 623 806 3.5E-23 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 SUPERFAMILY SSF52317 1039 1297 3.96E-96 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_1454 b6e84a652dc05051ff6d459a96d37b8b 1298 Gene3D G3DSA:3.40.50.880 984 1298 6.1E-137 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_5734 1bd17f9890f7937001024c2439d3e9e6 146 Gene3D G3DSA:2.40.10.330 76 130 5.7E-22 T 12-10-2018 PA257_5734 1bd17f9890f7937001024c2439d3e9e6 146 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 141 1.4E-23 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PA257_5734 1bd17f9890f7937001024c2439d3e9e6 146 SUPERFAMILY SSF54534 9 143 4.71E-40 T 12-10-2018 PA257_1734 18c85738c7bcd6c16e1f85505d501318 520 PIRSF PIRSF500217 1 520 6.2E-164 T 12-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 PA257_1734 18c85738c7bcd6c16e1f85505d501318 520 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 148 355 1.0E-26 T 12-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT PA257_1734 18c85738c7bcd6c16e1f85505d501318 520 PIRSF PIRSF016636 1 446 5.6E-159 T 12-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB PA257_1734 18c85738c7bcd6c16e1f85505d501318 520 PIRSF PIRSF016636 474 520 0.059 T 12-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB PA257_4449 8326de59fd1d05c54580ab0431913f39 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.1E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4449 8326de59fd1d05c54580ab0431913f39 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.1E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4449 8326de59fd1d05c54580ab0431913f39 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.1E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4449 8326de59fd1d05c54580ab0431913f39 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4449 8326de59fd1d05c54580ab0431913f39 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4449 8326de59fd1d05c54580ab0431913f39 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4449 8326de59fd1d05c54580ab0431913f39 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4449 8326de59fd1d05c54580ab0431913f39 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4449 8326de59fd1d05c54580ab0431913f39 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4449 8326de59fd1d05c54580ab0431913f39 264 Gene3D G3DSA:3.40.50.720 1 263 1.1E-69 T 12-10-2018 PA257_4449 8326de59fd1d05c54580ab0431913f39 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 1.7E-41 T 12-10-2018 PA257_4449 8326de59fd1d05c54580ab0431913f39 264 SUPERFAMILY SSF51735 1 259 9.94E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2975 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 7.0E-18 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PA257_2975 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 Gene3D G3DSA:1.20.120.1760 2 180 1.2E-17 T 12-10-2018 PA257_2975 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 179 5.7E-56 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 PA257_2975 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 PIRSF PIRSF000847 1 186 8.8E-51 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 PA257_2975 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 SUPERFAMILY SSF69742 1 156 6.02E-49 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 Gene3D G3DSA:3.30.460.30 2 156 4.8E-57 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 4.2E-50 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 31.249 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 1.1E-141 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.2E-50 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 319 415 1.7E-23 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 Gene3D G3DSA:3.40.50.720 160 311 4.3E-45 T 12-10-2018 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 PIRSF PIRSF000445 1 422 9.5E-158 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 SUPERFAMILY SSF69075 315 416 1.7E-27 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PA257_5852 fbe12e0416aebd409fddcfc1704da6ce 422 SUPERFAMILY SSF51735 160 313 3.38E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3226 ae55c727b6efcf3999e7fda612f6bc89 439 SUPERFAMILY SSF50952 64 437 3.27E-33 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 PA257_3226 ae55c727b6efcf3999e7fda612f6bc89 439 Gene3D G3DSA:2.120.10.30 69 375 1.3E-20 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PA257_3226 ae55c727b6efcf3999e7fda612f6bc89 439 Pfam PF07995 Glucose / Sorbosone dehydrogenase 166 360 6.1E-14 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase PA257_1686 d236697fd219d4415d1a46b274b15341 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PA257_1686 d236697fd219d4415d1a46b274b15341 401 Gene3D G3DSA:3.40.47.10 140 397 9.1E-141 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1686 d236697fd219d4415d1a46b274b15341 401 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 PA257_1686 d236697fd219d4415d1a46b274b15341 401 Pfam PF00108 Thiolase, N-terminal domain 5 265 2.3E-61 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_1686 d236697fd219d4415d1a46b274b15341 401 SUPERFAMILY SSF53901 3 274 6.26E-66 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1686 d236697fd219d4415d1a46b274b15341 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 3.8E-121 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_1686 d236697fd219d4415d1a46b274b15341 401 PIRSF PIRSF000429 1 401 4.9E-122 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_1686 d236697fd219d4415d1a46b274b15341 401 Pfam PF02803 Thiolase, C-terminal domain 276 399 1.4E-42 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_1686 d236697fd219d4415d1a46b274b15341 401 SUPERFAMILY SSF53901 276 399 1.43E-41 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1686 d236697fd219d4415d1a46b274b15341 401 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PA257_1686 d236697fd219d4415d1a46b274b15341 401 Gene3D G3DSA:3.40.47.10 6 281 9.1E-141 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_0854 cd04fee333f03d42c7419d33aa6a7bd3 118 PIRSF PIRSF002134 1 118 4.5E-44 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0854 cd04fee333f03d42c7419d33aa6a7bd3 118 Gene3D G3DSA:1.10.8.50 1 71 1.7E-29 T 12-10-2018 PA257_0854 cd04fee333f03d42c7419d33aa6a7bd3 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.1E-33 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0854 cd04fee333f03d42c7419d33aa6a7bd3 118 SUPERFAMILY SSF46946 2 114 3.01E-48 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PA257_0854 cd04fee333f03d42c7419d33aa6a7bd3 118 Gene3D G3DSA:4.10.910.10 72 118 3.2E-27 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0854 cd04fee333f03d42c7419d33aa6a7bd3 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.5E-55 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0854 cd04fee333f03d42c7419d33aa6a7bd3 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0854 cd04fee333f03d42c7419d33aa6a7bd3 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.81 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_3908 67ab129867d0761b776a0d2b1f698782 194 SUPERFAMILY SSF89360 3 100 1.57E-19 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PA257_3908 67ab129867d0761b776a0d2b1f698782 194 Gene3D G3DSA:3.30.300.130 103 191 6.7E-23 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PA257_3908 67ab129867d0761b776a0d2b1f698782 194 SUPERFAMILY SSF117916 98 188 3.05E-26 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PA257_3908 67ab129867d0761b776a0d2b1f698782 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 100 4.7E-10 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 PA257_3908 67ab129867d0761b776a0d2b1f698782 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 42.281 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 PA257_3908 67ab129867d0761b776a0d2b1f698782 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 3.0E-28 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PA257_3908 67ab129867d0761b776a0d2b1f698782 194 Gene3D G3DSA:2.60.300.12 2 101 3.5E-11 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PA257_3908 67ab129867d0761b776a0d2b1f698782 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 6.8E-96 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 PA257_3908 67ab129867d0761b776a0d2b1f698782 194 Pfam PF01106 NifU-like domain 114 180 2.3E-21 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PA257_3296 96ff534940ed96cbe2acc0ad5b392df1 462 Pfam PF00296 Luciferase-like monooxygenase 26 391 6.8E-60 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_3296 96ff534940ed96cbe2acc0ad5b392df1 462 PIRSF PIRSF000337 3 448 1.2E-145 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PA257_3296 96ff534940ed96cbe2acc0ad5b392df1 462 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 433 2.5E-168 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PA257_3296 96ff534940ed96cbe2acc0ad5b392df1 462 Gene3D G3DSA:3.20.20.30 2 457 5.3E-151 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_3296 96ff534940ed96cbe2acc0ad5b392df1 462 SUPERFAMILY SSF51679 3 437 8.24E-126 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_5485 5f52e06e2cc725553828b7e93dac3d34 579 SUPERFAMILY SSF56601 174 561 6.49E-92 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_5485 5f52e06e2cc725553828b7e93dac3d34 579 Pfam PF00905 Penicillin binding protein transpeptidase domain 247 546 2.1E-85 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PA257_5485 5f52e06e2cc725553828b7e93dac3d34 579 Gene3D G3DSA:3.90.1310.30 50 222 1.5E-48 T 12-10-2018 PA257_5485 5f52e06e2cc725553828b7e93dac3d34 579 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 207 1.4E-17 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PA257_5485 5f52e06e2cc725553828b7e93dac3d34 579 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 10 562 43.791 T 12-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_5485 5f52e06e2cc725553828b7e93dac3d34 579 Gene3D G3DSA:3.30.450.330 223 550 1.0E-122 T 12-10-2018 PA257_5485 5f52e06e2cc725553828b7e93dac3d34 579 Gene3D G3DSA:3.40.710.10 283 464 1.0E-122 T 12-10-2018 PA257_5485 5f52e06e2cc725553828b7e93dac3d34 579 SUPERFAMILY SSF56519 54 221 1.83E-44 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 SUPERFAMILY SSF55874 266 417 2.23E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 SMART SM00388 207 273 1.6E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 269 5.7E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 SUPERFAMILY SSF47384 205 271 5.69E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 SMART SM00387 315 419 5.4E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 417 1.6E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 Gene3D G3DSA:1.10.287.130 212 270 6.6E-33 T 12-10-2018 PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 Gene3D G3DSA:3.30.565.10 271 416 6.6E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 1.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 1.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5563 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0632 17f5c7d6288c1dd46a8f133a57034375 252 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 40.913 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PA257_0632 17f5c7d6288c1dd46a8f133a57034375 252 Gene3D G3DSA:3.20.20.370 2 252 1.8E-92 T 12-10-2018 PA257_0632 17f5c7d6288c1dd46a8f133a57034375 252 Pfam PF03746 LamB/YcsF family 4 242 1.2E-90 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PA257_0632 17f5c7d6288c1dd46a8f133a57034375 252 SUPERFAMILY SSF88713 3 249 1.19E-88 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PA257_6947 5bf31982fa26eb3918707fe8e280a9ca 414 Gene3D G3DSA:1.20.58.710 149 248 2.1E-95 T 12-10-2018 PA257_6947 5bf31982fa26eb3918707fe8e280a9ca 414 SUPERFAMILY SSF56601 43 413 6.4E-88 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_6947 5bf31982fa26eb3918707fe8e280a9ca 414 Pfam PF00144 Beta-lactamase 95 408 5.2E-56 T 12-10-2018 IPR001466 Beta-lactamase-related PA257_6947 5bf31982fa26eb3918707fe8e280a9ca 414 Gene3D G3DSA:3.40.710.10 97 392 2.1E-95 T 12-10-2018 PA257_5246 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 177 9.1E-56 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 PA257_5246 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5246 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5246 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 Pfam PF00809 Pterin binding enzyme 5 177 2.0E-48 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5246 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 Gene3D G3DSA:3.20.20.20 1 202 4.5E-44 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5246 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 Pfam PF11843 Protein of unknown function (DUF3363) 176 322 2.5E-54 T 12-10-2018 IPR021795 Protein of unknown function DUF3363 PA257_5246 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 SUPERFAMILY SSF51717 3 178 4.45E-46 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_0306 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 177 9.1E-56 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 PA257_0306 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_0306 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_0306 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 Pfam PF00809 Pterin binding enzyme 5 177 2.0E-48 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_0306 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 Gene3D G3DSA:3.20.20.20 1 202 4.5E-44 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_0306 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 Pfam PF11843 Protein of unknown function (DUF3363) 176 322 2.5E-54 T 12-10-2018 IPR021795 Protein of unknown function DUF3363 PA257_0306 8bf6ecd17e7b8ff4027b5fdb882dd9c8 323 SUPERFAMILY SSF51717 3 178 4.45E-46 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_1661 0d3d15ea9030762a98b054350db31049 801 SUPERFAMILY SSF52518 422 620 3.83E-7 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_1661 0d3d15ea9030762a98b054350db31049 801 SUPERFAMILY SSF52518 81 387 1.14E-20 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_1661 0d3d15ea9030762a98b054350db31049 801 PIRSF PIRSF017245 26 801 2.4E-227 T 12-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 PA257_1661 0d3d15ea9030762a98b054350db31049 801 Gene3D G3DSA:3.40.50.970 428 634 9.7E-41 T 12-10-2018 PA257_1661 0d3d15ea9030762a98b054350db31049 801 Gene3D G3DSA:3.40.50.970 53 400 3.5E-60 T 12-10-2018 PA257_1661 0d3d15ea9030762a98b054350db31049 801 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 434 604 2.6E-42 T 12-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 PA257_1661 0d3d15ea9030762a98b054350db31049 801 Pfam PF09364 XFP N-terminal domain 66 307 3.6E-14 T 12-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal PA257_0542 a5832b2b11243276d3a78106caf4626c 317 SUPERFAMILY SSF56059 124 311 2.83E-57 T 12-10-2018 PA257_0542 a5832b2b11243276d3a78106caf4626c 317 Gene3D G3DSA:3.30.1490.20 138 202 3.6E-116 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_0542 a5832b2b11243276d3a78106caf4626c 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 313 9.3E-136 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PA257_0542 a5832b2b11243276d3a78106caf4626c 317 Gene3D G3DSA:3.40.50.20 8 115 3.6E-116 T 12-10-2018 PA257_0542 a5832b2b11243276d3a78106caf4626c 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 121 5.8E-44 T 12-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PA257_0542 a5832b2b11243276d3a78106caf4626c 317 SUPERFAMILY SSF52440 3 123 1.29E-42 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_0542 a5832b2b11243276d3a78106caf4626c 317 Gene3D G3DSA:3.30.470.20 116 296 3.6E-116 T 12-10-2018 PA257_0542 a5832b2b11243276d3a78106caf4626c 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 173.709 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PA257_0542 a5832b2b11243276d3a78106caf4626c 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 2.2E-79 T 12-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PA257_3371 b07595a8d55f6baf7101ceb045b8bfa1 156 Pfam PF00376 MerR family regulatory protein 11 47 2.1E-12 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_3371 b07595a8d55f6baf7101ceb045b8bfa1 156 SUPERFAMILY SSF46955 10 132 3.0E-28 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_3371 b07595a8d55f6baf7101ceb045b8bfa1 156 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_3371 b07595a8d55f6baf7101ceb045b8bfa1 156 Pfam PF09278 MerR, DNA binding 52 117 8.1E-16 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding PA257_3371 b07595a8d55f6baf7101ceb045b8bfa1 156 SMART SM00422 10 78 3.8E-28 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_3371 b07595a8d55f6baf7101ceb045b8bfa1 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 2.9E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_3371 b07595a8d55f6baf7101ceb045b8bfa1 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 2.9E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_3371 b07595a8d55f6baf7101ceb045b8bfa1 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 2.9E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_3371 b07595a8d55f6baf7101ceb045b8bfa1 156 Gene3D G3DSA:1.10.1660.10 2 133 1.4E-33 T 12-10-2018 PA257_3371 b07595a8d55f6baf7101ceb045b8bfa1 156 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 9 149 2.0E-74 T 12-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 PA257_0267 1432734068e2a7cea1b491620d4e9d66 421 Pfam PF03573 outer membrane porin, OprD family 31 419 7.5E-150 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_0267 1432734068e2a7cea1b491620d4e9d66 421 Gene3D G3DSA:2.40.160.10 36 421 2.4E-163 T 12-10-2018 IPR023614 Porin domain superfamily PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Pfam PF05188 MutS domain II 132 257 4.4E-31 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Gene3D G3DSA:3.40.50.300 572 826 6.4E-100 T 12-10-2018 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Pfam PF05190 MutS family domain IV 431 521 2.6E-29 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Pfam PF05192 MutS domain III 274 562 2.9E-38 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 11 856 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 SMART SM00534 610 796 1.4E-121 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 691 707 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Pfam PF00488 MutS domain V 613 799 5.0E-85 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 PIRSF PIRSF037677 204 837 8.8E-124 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 PIRSF PIRSF037677 5 184 2.3E-27 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Gene3D G3DSA:1.10.1420.10 270 562 9.1E-100 T 12-10-2018 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Gene3D G3DSA:3.30.420.110 131 263 3.7E-38 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Pfam PF01624 MutS domain I 12 123 1.6E-42 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 SUPERFAMILY SSF53150 118 270 9.16E-44 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 SUPERFAMILY SSF55271 6 119 5.23E-43 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Gene3D G3DSA:1.10.1420.10 390 506 9.1E-100 T 12-10-2018 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 SUPERFAMILY SSF48334 271 568 7.19E-85 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 11 851 25.303 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 SMART SM00533 287 594 6.2E-109 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 SUPERFAMILY SSF52540 572 799 9.11E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1601 c9ea1956d3e1caa0761ebb80d0d8960c 859 Gene3D G3DSA:3.40.1170.10 3 125 2.0E-51 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Gene3D G3DSA:3.30.300.30 1251 1341 3.8E-11 T 12-10-2018 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Pfam PF00668 Condensation domain 137 438 9.8E-28 T 12-10-2018 IPR001242 Condensation domain PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Pfam PF00550 Phosphopantetheine attachment site 13 80 1.7E-7 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Pfam PF00550 Phosphopantetheine attachment site 1358 1421 5.8E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 SUPERFAMILY SSF47336 1349 1421 6.28E-17 T 12-10-2018 IPR036736 ACP-like superfamily PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1380 1395 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 SUPERFAMILY SSF56801 543 1333 3.25E-117 T 12-10-2018 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 SUPERFAMILY SSF47336 6 117 9.16E-10 T 12-10-2018 IPR036736 ACP-like superfamily PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Gene3D G3DSA:3.40.50.12780 550 942 1.9E-107 T 12-10-2018 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Gene3D G3DSA:3.30.300.30 944 1042 1.6E-9 T 12-10-2018 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 SUPERFAMILY SSF52777 285 526 1.56E-39 T 12-10-2018 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Gene3D G3DSA:1.10.1200.10 1342 1430 3.3E-22 T 12-10-2018 IPR036736 ACP-like superfamily PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 SUPERFAMILY SSF52777 100 296 7.45E-21 T 12-10-2018 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 583 973 5.1E-113 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 SMART SM00823 Phosphopantetheine attachment site 1356 1425 2.3E-12 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 ProSitePatterns PS00455 Putative AMP-binding domain signature. 694 705 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Pfam PF00501 AMP-binding enzyme 563 950 6.5E-84 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Gene3D G3DSA:3.30.559.10 98 279 4.0E-38 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Gene3D G3DSA:3.30.559.30 282 531 1.2E-72 T 12-10-2018 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Gene3D G3DSA:3.40.50.150 1142 1242 2.9E-7 T 12-10-2018 PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 Gene3D G3DSA:1.10.1200.10 6 84 7.6E-17 T 12-10-2018 IPR036736 ACP-like superfamily PA257_0869 303bb1d3a81898f30a9aa690252c8750 1438 SUPERFAMILY SSF53335 1109 1268 1.37E-9 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0649 4d880b74676b1288051c7b57006c3a41 592 SUPERFAMILY SSF47203 289 473 6.12E-47 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_0649 4d880b74676b1288051c7b57006c3a41 592 SUPERFAMILY SSF56645 38 281 3.66E-54 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_0649 4d880b74676b1288051c7b57006c3a41 592 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 2.5E-21 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_0649 4d880b74676b1288051c7b57006c3a41 592 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 3.5E-16 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_0649 4d880b74676b1288051c7b57006c3a41 592 Gene3D G3DSA:1.10.540.10 81 161 2.5E-90 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_0649 4d880b74676b1288051c7b57006c3a41 592 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 585 5.2E-35 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PA257_0649 4d880b74676b1288051c7b57006c3a41 592 Gene3D G3DSA:1.20.140.10 283 450 2.5E-90 T 12-10-2018 PA257_0649 4d880b74676b1288051c7b57006c3a41 592 Gene3D G3DSA:2.40.110.10 162 282 2.5E-90 T 12-10-2018 PA257_0649 4d880b74676b1288051c7b57006c3a41 592 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 5.2E-12 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PA257_0649 4d880b74676b1288051c7b57006c3a41 592 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 2.2E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_0743 16220d9fcacd14df2ce8642780bbe80e 404 Hamap MF_01183 Chaperone SurA [surA]. 1 404 32.226 T 12-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 PA257_0743 16220d9fcacd14df2ce8642780bbe80e 404 Gene3D G3DSA:1.10.4030.30 5 258 3.0E-75 T 12-10-2018 PA257_0743 16220d9fcacd14df2ce8642780bbe80e 404 Gene3D G3DSA:3.10.50.40 259 397 3.4E-44 T 12-10-2018 PA257_0743 16220d9fcacd14df2ce8642780bbe80e 404 SUPERFAMILY SSF54534 259 361 5.1E-34 T 12-10-2018 PA257_0743 16220d9fcacd14df2ce8642780bbe80e 404 SUPERFAMILY SSF109998 4 181 7.26E-45 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily PA257_0743 16220d9fcacd14df2ce8642780bbe80e 404 Pfam PF00639 PPIC-type PPIASE domain 158 250 3.9E-19 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 PA257_0743 16220d9fcacd14df2ce8642780bbe80e 404 Pfam PF09312 SurA N-terminal domain 4 121 5.8E-46 T 12-10-2018 IPR015391 SurA N-terminal PA257_0743 16220d9fcacd14df2ce8642780bbe80e 404 Gene3D G3DSA:3.10.50.40 151 253 3.0E-75 T 12-10-2018 PA257_0743 16220d9fcacd14df2ce8642780bbe80e 404 Pfam PF13616 PPIC-type PPIASE domain 256 359 1.6E-28 T 12-10-2018 PA257_0743 16220d9fcacd14df2ce8642780bbe80e 404 SUPERFAMILY SSF54534 151 255 4.97E-26 T 12-10-2018 PA257_4813 6c6dd0696f9a52b393a737e9a0265892 236 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_4813 6c6dd0696f9a52b393a737e9a0265892 236 Gene3D G3DSA:3.30.470.20 85 220 5.8E-93 T 12-10-2018 PA257_4813 6c6dd0696f9a52b393a737e9a0265892 236 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 233 1.8E-79 T 12-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 PA257_4813 6c6dd0696f9a52b393a737e9a0265892 236 Gene3D G3DSA:3.30.200.20 7 231 5.8E-93 T 12-10-2018 PA257_4813 6c6dd0696f9a52b393a737e9a0265892 236 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_4813 6c6dd0696f9a52b393a737e9a0265892 236 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 31.413 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_4813 6c6dd0696f9a52b393a737e9a0265892 236 SUPERFAMILY SSF56104 3 232 6.21E-80 T 12-10-2018 PA257_4813 6c6dd0696f9a52b393a737e9a0265892 236 Pfam PF01259 SAICAR synthetase 7 231 2.5E-63 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_4685 a0032a977f0ecdda1fcdac6b50fb3766 494 SUPERFAMILY SSF109604 32 489 1.84E-58 T 12-10-2018 PA257_4685 a0032a977f0ecdda1fcdac6b50fb3766 494 Pfam PF01966 HD domain 67 132 9.0E-8 T 12-10-2018 IPR006674 HD domain PA257_4685 a0032a977f0ecdda1fcdac6b50fb3766 494 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 32 492 3.0E-108 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 PA257_4685 a0032a977f0ecdda1fcdac6b50fb3766 494 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 494 44.489 T 12-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 PA257_4685 a0032a977f0ecdda1fcdac6b50fb3766 494 Gene3D G3DSA:1.10.3410.10 245 383 1.7E-17 T 12-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 PA257_4685 a0032a977f0ecdda1fcdac6b50fb3766 494 SMART SM00471 63 267 8.8E-10 T 12-10-2018 IPR003607 HD/PDEase domain PA257_4685 a0032a977f0ecdda1fcdac6b50fb3766 494 Gene3D G3DSA:1.10.3210.10 1 242 7.0E-54 T 12-10-2018 PA257_3534 6649fd375064dacf42998a1a836f8620 417 Pfam PF01266 FAD dependent oxidoreductase 6 385 1.7E-67 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_3534 6649fd375064dacf42998a1a836f8620 417 Gene3D G3DSA:3.30.9.10 126 347 4.5E-85 T 12-10-2018 PA257_3534 6649fd375064dacf42998a1a836f8620 417 Gene3D G3DSA:3.50.50.60 6 388 4.5E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3534 6649fd375064dacf42998a1a836f8620 417 SUPERFAMILY SSF54373 261 348 1.11E-16 T 12-10-2018 PA257_3534 6649fd375064dacf42998a1a836f8620 417 SUPERFAMILY SSF51905 4 411 3.24E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4255 6ba06b9950648442ad3eb38e5d453384 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.277 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PA257_4255 6ba06b9950648442ad3eb38e5d453384 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 1.4E-33 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PA257_4255 6ba06b9950648442ad3eb38e5d453384 108 Gene3D G3DSA:3.30.1310.10 1 108 9.9E-45 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily PA257_4255 6ba06b9950648442ad3eb38e5d453384 108 SUPERFAMILY SSF82607 10 102 5.89E-36 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily PA257_4255 6ba06b9950648442ad3eb38e5d453384 108 PIRSF PIRSF004555 2 108 1.0E-37 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PA257_4255 6ba06b9950648442ad3eb38e5d453384 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 99 9.4E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PA257_4967 8be75db6a41e6f573aa7c4c3bf83fdab 275 Pfam PF13452 N-terminal half of MaoC dehydratase 72 133 3.7E-8 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 PA257_4967 8be75db6a41e6f573aa7c4c3bf83fdab 275 SUPERFAMILY SSF54637 56 147 1.07E-7 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_4967 8be75db6a41e6f573aa7c4c3bf83fdab 275 Gene3D G3DSA:3.10.129.10 12 151 7.9E-13 T 12-10-2018 PA257_4967 8be75db6a41e6f573aa7c4c3bf83fdab 275 SUPERFAMILY SSF54637 168 260 1.66E-13 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_4967 8be75db6a41e6f573aa7c4c3bf83fdab 275 Gene3D G3DSA:3.10.129.10 163 274 2.4E-12 T 12-10-2018 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:2.40.50.250 483 599 1.7E-129 T 12-10-2018 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 8.9E-58 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF50447 151 299 1.79E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF54980 302 387 3.2E-15 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:3.30.70.870 306 590 1.7E-129 T 12-10-2018 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 Pfam PF03144 Elongation factor Tu domain 2 219 289 9.6E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 1.7E-286 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:2.40.30.10 199 299 2.2E-34 T 12-10-2018 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:3.40.50.300 1 198 7.3E-71 T 12-10-2018 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 1.1E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.1E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.1E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.1E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.1E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.1E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF52540 3 219 3.85E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 Pfam PF00679 Elongation factor G C-terminus 397 477 1.5E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF54980 398 512 1.82E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_6408 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:3.30.70.240 389 482 1.7E-129 T 12-10-2018 PA257_2753 0cffcb612460d375e29fe3ab295b792d 318 Pfam PF01226 Formate/nitrite transporter 78 310 2.0E-43 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 PA257_2753 0cffcb612460d375e29fe3ab295b792d 318 Gene3D G3DSA:1.20.1080.10 88 315 1.9E-38 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PA257_4552 7072346b9431da584c2565fc41183da2 481 SUPERFAMILY SSF56954 26 440 1.96E-86 T 12-10-2018 PA257_4552 7072346b9431da584c2565fc41183da2 481 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 24 444 3.5E-144 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 PA257_4552 7072346b9431da584c2565fc41183da2 481 Gene3D G3DSA:1.20.1600.10 26 449 4.0E-97 T 12-10-2018 PA257_4552 7072346b9431da584c2565fc41183da2 481 Pfam PF02321 Outer membrane efflux protein 31 219 5.9E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_4552 7072346b9431da584c2565fc41183da2 481 Pfam PF02321 Outer membrane efflux protein 247 430 2.5E-32 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_4791 6e69ac852a1dc1abb2363fd75792399f 491 Pfam PF02646 RmuC family 174 470 3.7E-107 T 12-10-2018 IPR003798 DNA recombination RmuC PA257_2318 5b28bf898c2d8e642810f8ba3ed2613f 414 Pfam PF02687 FtsX-like permease family 300 407 6.1E-15 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PA257_2318 5b28bf898c2d8e642810f8ba3ed2613f 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 414 3.5E-156 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 PA257_2318 5b28bf898c2d8e642810f8ba3ed2613f 414 Pfam PF12704 MacB-like periplasmic core domain 27 241 3.8E-18 T 12-10-2018 IPR025857 MacB-like periplasmic core domain PA257_4340 7c426c326dcd753c52680c46f88d65c2 429 SMART SM00382 208 379 4.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4340 7c426c326dcd753c52680c46f88d65c2 429 Gene3D G3DSA:3.40.50.300 204 389 5.1E-47 T 12-10-2018 PA257_4340 7c426c326dcd753c52680c46f88d65c2 429 Gene3D G3DSA:1.20.120.1380 185 391 5.1E-47 T 12-10-2018 PA257_4340 7c426c326dcd753c52680c46f88d65c2 429 Pfam PF00448 SRP54-type protein, GTPase domain 211 399 4.8E-40 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_4340 7c426c326dcd753c52680c46f88d65c2 429 SUPERFAMILY SSF52540 207 398 2.64E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4340 7c426c326dcd753c52680c46f88d65c2 429 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 297 5.1E-77 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 PA257_4340 7c426c326dcd753c52680c46f88d65c2 429 SMART SM00962 209 401 2.9E-46 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_1554 66add8e4af46f7e406d3fb4af942f4a1 401 Gene3D G3DSA:3.90.1150.10 8 391 8.0E-139 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_1554 66add8e4af46f7e406d3fb4af942f4a1 401 SUPERFAMILY SSF53383 6 398 2.53E-108 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_1554 66add8e4af46f7e406d3fb4af942f4a1 401 Gene3D G3DSA:3.40.640.10 34 293 8.0E-139 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_1554 66add8e4af46f7e406d3fb4af942f4a1 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 233 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PA257_1554 66add8e4af46f7e406d3fb4af942f4a1 401 Pfam PF00266 Aminotransferase class-V 24 389 6.1E-137 T 12-10-2018 IPR000192 Aminotransferase class V domain PA257_1926 91e6d1a1fe8bda4631d89b1bf475bb4c 310 SUPERFAMILY SSF50341 16 156 5.75E-35 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_1926 91e6d1a1fe8bda4631d89b1bf475bb4c 310 SMART SM00260 17 153 4.0E-20 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_1926 91e6d1a1fe8bda4631d89b1bf475bb4c 310 Gene3D G3DSA:3.40.50.2300 177 308 9.9E-26 T 12-10-2018 PA257_1926 91e6d1a1fe8bda4631d89b1bf475bb4c 310 Gene3D G3DSA:2.30.30.40 24 147 1.0E-28 T 12-10-2018 PA257_1926 91e6d1a1fe8bda4631d89b1bf475bb4c 310 SUPERFAMILY SSF52172 179 303 1.12E-24 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1926 91e6d1a1fe8bda4631d89b1bf475bb4c 310 SMART SM00448 179 300 1.3E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1926 91e6d1a1fe8bda4631d89b1bf475bb4c 310 PIRSF PIRSF002867 1 308 1.5E-108 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV PA257_1926 91e6d1a1fe8bda4631d89b1bf475bb4c 310 Pfam PF00072 Response regulator receiver domain 181 300 2.0E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1926 91e6d1a1fe8bda4631d89b1bf475bb4c 310 Gene3D G3DSA:2.40.50.180 39 153 1.0E-28 T 12-10-2018 PA257_1926 91e6d1a1fe8bda4631d89b1bf475bb4c 310 Pfam PF01584 CheW-like domain 21 156 3.3E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_3401 e2a523c485885e12328fcb3f16c988aa 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.6E-18 T 12-10-2018 PA257_3401 e2a523c485885e12328fcb3f16c988aa 153 SMART SM00344 4 113 4.5E-38 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PA257_3401 e2a523c485885e12328fcb3f16c988aa 153 SUPERFAMILY SSF46785 4 62 3.33E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3401 e2a523c485885e12328fcb3f16c988aa 153 Gene3D G3DSA:1.10.10.10 1 57 7.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3401 e2a523c485885e12328fcb3f16c988aa 153 Gene3D G3DSA:3.30.70.920 58 141 5.2E-25 T 12-10-2018 PA257_3401 e2a523c485885e12328fcb3f16c988aa 153 SUPERFAMILY SSF54909 66 153 8.85E-20 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_3401 e2a523c485885e12328fcb3f16c988aa 153 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 1.3E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PA257_3401 e2a523c485885e12328fcb3f16c988aa 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 6.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_3401 e2a523c485885e12328fcb3f16c988aa 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 6.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_3401 e2a523c485885e12328fcb3f16c988aa 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 6.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_0177 06e1e557526a2d7e8a2099fb6f7070b5 795 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 146 795 3.2E-109 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_0177 06e1e557526a2d7e8a2099fb6f7070b5 795 Gene3D G3DSA:2.40.170.20 259 795 2.8E-119 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_0177 06e1e557526a2d7e8a2099fb6f7070b5 795 Gene3D G3DSA:3.55.50.30 24 126 1.9E-21 T 12-10-2018 PA257_0177 06e1e557526a2d7e8a2099fb6f7070b5 795 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 778 795 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_0177 06e1e557526a2d7e8a2099fb6f7070b5 795 Gene3D G3DSA:2.170.130.10 128 253 6.5E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_0177 06e1e557526a2d7e8a2099fb6f7070b5 795 Pfam PF07660 Secretin and TonB N terminus short domain 58 106 1.7E-7 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_0177 06e1e557526a2d7e8a2099fb6f7070b5 795 Pfam PF00593 TonB dependent receptor 317 793 2.6E-69 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_0177 06e1e557526a2d7e8a2099fb6f7070b5 795 SUPERFAMILY SSF56935 112 795 4.12E-125 T 12-10-2018 PA257_0177 06e1e557526a2d7e8a2099fb6f7070b5 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 242 3.4E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_0177 06e1e557526a2d7e8a2099fb6f7070b5 795 SMART SM00965 56 107 1.4E-10 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_6115 6be6b54749d07984f83a9a7f58613370 123 SUPERFAMILY SSF55159 13 120 1.15E-27 T 12-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 PA257_6115 6be6b54749d07984f83a9a7f58613370 123 Pfam PF01253 Translation initiation factor SUI1 49 117 2.7E-16 T 12-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 PA257_6115 6be6b54749d07984f83a9a7f58613370 123 PIRSF PIRSF037511 1 123 6.0E-44 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 PA257_6115 6be6b54749d07984f83a9a7f58613370 123 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 14 123 9.5E-38 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 PA257_6115 6be6b54749d07984f83a9a7f58613370 123 Gene3D G3DSA:3.30.780.10 43 123 1.3E-27 T 12-10-2018 PA257_3116 d9d797864c36f56d78080a398492261c 920 Pfam PF05593 RHS Repeat 232 269 1.6E-8 T 12-10-2018 IPR031325 RHS repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 Pfam PF05593 RHS Repeat 58 96 1.4E-7 T 12-10-2018 IPR031325 RHS repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 Pfam PF05593 RHS Repeat 366 408 1.5E-5 T 12-10-2018 IPR031325 RHS repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 Pfam PF05593 RHS Repeat 295 328 5.4E-8 T 12-10-2018 IPR031325 RHS repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 Pfam PF05593 RHS Repeat 105 137 9.8E-5 T 12-10-2018 IPR031325 RHS repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 Pfam PF05593 RHS Repeat 190 223 2.7E-5 T 12-10-2018 IPR031325 RHS repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 Pfam PF05593 RHS Repeat 253 289 8.1E-11 T 12-10-2018 IPR031325 RHS repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 Gene3D G3DSA:3.90.930.1 221 349 2.9E-9 T 12-10-2018 PA257_3116 d9d797864c36f56d78080a398492261c 920 Gene3D G3DSA:2.180.10.10 363 518 1.4E-9 T 12-10-2018 PA257_3116 d9d797864c36f56d78080a398492261c 920 Gene3D G3DSA:2.180.10.10 519 779 1.6E-47 T 12-10-2018 PA257_3116 d9d797864c36f56d78080a398492261c 920 Gene3D G3DSA:2.180.10.10 79 208 7.6E-9 T 12-10-2018 PA257_3116 d9d797864c36f56d78080a398492261c 920 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 704 779 1.2E-24 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 PA257_3116 d9d797864c36f56d78080a398492261c 920 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 109 137 0.0014 T 12-10-2018 IPR006530 YD repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 253 294 1.2E-11 T 12-10-2018 IPR006530 YD repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 295 330 3.1E-8 T 12-10-2018 IPR006530 YD repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 58 97 8.0E-7 T 12-10-2018 IPR006530 YD repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 211 251 5.2E-7 T 12-10-2018 IPR006530 YD repeat PA257_3116 d9d797864c36f56d78080a398492261c 920 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 584 622 8.6E-6 T 12-10-2018 IPR006530 YD repeat PA257_1719 37f1137a4964c7c016bbfa80b74e4786 329 Gene3D G3DSA:3.40.50.2300 155 329 3.4E-33 T 12-10-2018 PA257_1719 37f1137a4964c7c016bbfa80b74e4786 329 SUPERFAMILY SSF53822 60 315 2.94E-52 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_1719 37f1137a4964c7c016bbfa80b74e4786 329 Gene3D G3DSA:1.10.260.40 1 61 8.3E-25 T 12-10-2018 PA257_1719 37f1137a4964c7c016bbfa80b74e4786 329 Gene3D G3DSA:3.40.50.2300 62 154 4.6E-25 T 12-10-2018 PA257_1719 37f1137a4964c7c016bbfa80b74e4786 329 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 329 2.6E-132 T 12-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 PA257_1719 37f1137a4964c7c016bbfa80b74e4786 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 246 1.6E-20 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain PA257_1719 37f1137a4964c7c016bbfa80b74e4786 329 SUPERFAMILY SSF47413 2 58 1.41E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_1719 37f1137a4964c7c016bbfa80b74e4786 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 12-10-2018 PA257_1719 37f1137a4964c7c016bbfa80b74e4786 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 3.3E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PA257_1719 37f1137a4964c7c016bbfa80b74e4786 329 SMART SM00354 1 73 1.8E-28 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PA257_1493 6e45a65e7123de2264a215c50aa37a24 230 SUPERFAMILY SSF56024 91 226 4.71E-31 T 12-10-2018 PA257_1493 6e45a65e7123de2264a215c50aa37a24 230 Pfam PF13091 PLD-like domain 103 224 4.3E-28 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PA257_1493 6e45a65e7123de2264a215c50aa37a24 230 Gene3D G3DSA:3.30.870.10 38 230 4.3E-53 T 12-10-2018 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 SUPERFAMILY SSF55874 263 424 2.75E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 Gene3D G3DSA:3.30.565.10 277 426 1.2E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 424 1.7E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 SUPERFAMILY SSF158472 158 206 3.4E-6 T 12-10-2018 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 SMART SM00388 208 273 2.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 SUPERFAMILY SSF47384 191 274 4.51E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 SMART SM00304 155 207 6.9E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 Gene3D G3DSA:1.10.287.130 159 274 5.9E-24 T 12-10-2018 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 Pfam PF00672 HAMP domain 161 203 3.2E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 2.0E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3963 210966b9eec25f59cb14f8f75f7b9373 428 SMART SM00387 318 428 2.5E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6265 843adac5fe5d3ff0201737bb147f0d02 263 Gene3D G3DSA:1.10.12.10 206 263 1.2E-16 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PA257_6265 843adac5fe5d3ff0201737bb147f0d02 263 Gene3D G3DSA:3.90.226.10 4 205 2.5E-61 T 12-10-2018 PA257_6265 843adac5fe5d3ff0201737bb147f0d02 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PA257_6265 843adac5fe5d3ff0201737bb147f0d02 263 SUPERFAMILY SSF52096 3 263 3.17E-76 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_6265 843adac5fe5d3ff0201737bb147f0d02 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 262 1.6E-50 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_3689 0d02ca5df1ea985c0cd5f2f6aca781aa 86 Pfam PF01809 Haemolytic domain 4 68 1.0E-30 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PA257_3689 0d02ca5df1ea985c0cd5f2f6aca781aa 86 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 3.0E-15 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PA257_3689 0d02ca5df1ea985c0cd5f2f6aca781aa 86 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 25.801 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PA257_3689 0d02ca5df1ea985c0cd5f2f6aca781aa 86 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 74 2.5E-30 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PA257_3689 0d02ca5df1ea985c0cd5f2f6aca781aa 86 SMART SM01234 1 68 9.9E-48 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PA257_0794 2401267df089a6db38658d181b392a4c 358 Gene3D G3DSA:3.30.700.10 287 358 1.2E-5 T 12-10-2018 PA257_0794 2401267df089a6db38658d181b392a4c 358 SUPERFAMILY SSF54523 290 330 1.65E-5 T 12-10-2018 PA257_0794 2401267df089a6db38658d181b392a4c 358 Pfam PF05656 Protein of unknown function (DUF805) 175 277 4.7E-21 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 PA257_3013 e3f1c480b2806183685993b5a4fec08d 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 3.4E-24 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3013 e3f1c480b2806183685993b5a4fec08d 555 SUPERFAMILY SSF56801 28 543 2.62E-141 T 12-10-2018 PA257_3013 e3f1c480b2806183685993b5a4fec08d 555 Gene3D G3DSA:3.40.50.12780 19 439 1.0E-97 T 12-10-2018 PA257_3013 e3f1c480b2806183685993b5a4fec08d 555 Pfam PF00501 AMP-binding enzyme 40 443 6.8E-75 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3013 e3f1c480b2806183685993b5a4fec08d 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3013 e3f1c480b2806183685993b5a4fec08d 555 Gene3D G3DSA:3.30.300.30 440 554 2.3E-30 T 12-10-2018 PA257_2616 2209055e84e8619ebcd8e8e86b22846f 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 104 110 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_2616 2209055e84e8619ebcd8e8e86b22846f 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 7.2E-9 T 12-10-2018 PA257_2616 2209055e84e8619ebcd8e8e86b22846f 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 7.2E-9 T 12-10-2018 PA257_2616 2209055e84e8619ebcd8e8e86b22846f 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 7.2E-9 T 12-10-2018 PA257_2616 2209055e84e8619ebcd8e8e86b22846f 369 SUPERFAMILY SSF53335 18 184 1.2E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2616 2209055e84e8619ebcd8e8e86b22846f 369 Gene3D G3DSA:3.40.50.150 20 207 6.0E-19 T 12-10-2018 PA257_6227 5684a283cd8e9ba9a6076879ff3cbce4 82 SUPERFAMILY SSF50182 7 69 2.31E-24 T 12-10-2018 IPR010920 LSM domain superfamily PA257_6227 5684a283cd8e9ba9a6076879ff3cbce4 82 Pfam PF17209 Hfq protein 7 69 1.8E-31 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PA257_6227 5684a283cd8e9ba9a6076879ff3cbce4 82 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 64 27.384 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PA257_6227 5684a283cd8e9ba9a6076879ff3cbce4 82 Gene3D G3DSA:2.30.30.100 1 82 3.8E-36 T 12-10-2018 PA257_6227 5684a283cd8e9ba9a6076879ff3cbce4 82 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 64 4.1E-30 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 Gene3D G3DSA:1.10.150.20 552 606 4.8E-24 T 12-10-2018 PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 Gene3D G3DSA:3.40.1440.10 6 102 1.2E-29 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 604 29.679 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 539 9.1E-53 T 12-10-2018 IPR001162 UvrC family homology region PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 Pfam PF14520 Helix-hairpin-helix domain 554 603 2.4E-11 T 12-10-2018 PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 SUPERFAMILY SSF46600 190 243 3.27E-11 T 12-10-2018 IPR036876 UVR domain superfamily PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 Pfam PF01541 GIY-YIG catalytic domain 19 93 1.1E-9 T 12-10-2018 IPR000305 GIY-YIG endonuclease PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 SUPERFAMILY SSF47781 518 606 1.24E-23 T 12-10-2018 IPR010994 RuvA domain 2-like PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 586 3.0E-186 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 SMART SM00278 585 604 0.59 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 SMART SM00278 553 572 0.76 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 SUPERFAMILY SSF82771 16 100 1.83E-21 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 Pfam PF02151 UvrB/uvrC motif 214 234 6.7E-6 T 12-10-2018 IPR001943 UVR domain GO:0005515 PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 SMART SM00465 17 98 1.4E-22 T 12-10-2018 IPR000305 GIY-YIG endonuclease PA257_2974 9cbf8d1727a38453315aa417c37c9ccf 608 Gene3D G3DSA:3.30.420.340 377 549 9.4E-51 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily PA257_6087 9746b36a57d33507528ee4704e80a580 681 Gene3D G3DSA:3.50.50.60 480 634 1.3E-109 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6087 9746b36a57d33507528ee4704e80a580 681 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 628 642 2.4E-5 T 12-10-2018 PA257_6087 9746b36a57d33507528ee4704e80a580 681 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 408 2.4E-5 T 12-10-2018 PA257_6087 9746b36a57d33507528ee4704e80a580 681 SUPERFAMILY SSF51971 343 527 1.65E-40 T 12-10-2018 PA257_6087 9746b36a57d33507528ee4704e80a580 681 Gene3D G3DSA:3.40.50.720 385 674 1.3E-109 T 12-10-2018 PA257_6087 9746b36a57d33507528ee4704e80a580 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 507 525 2.0E-11 T 12-10-2018 PA257_6087 9746b36a57d33507528ee4704e80a580 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 387 406 2.0E-11 T 12-10-2018 PA257_6087 9746b36a57d33507528ee4704e80a580 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 627 643 2.0E-11 T 12-10-2018 PA257_6087 9746b36a57d33507528ee4704e80a580 681 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 16 340 8.3E-71 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PA257_6087 9746b36a57d33507528ee4704e80a580 681 SUPERFAMILY SSF51905 479 636 1.15E-15 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6087 9746b36a57d33507528ee4704e80a580 681 SUPERFAMILY SSF51395 11 372 5.86E-108 T 12-10-2018 PA257_6087 9746b36a57d33507528ee4704e80a580 681 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 385 644 5.0E-22 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_6087 9746b36a57d33507528ee4704e80a580 681 Gene3D G3DSA:3.20.20.70 12 379 1.6E-117 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 Gene3D G3DSA:1.10.150.20 243 328 2.4E-37 T 12-10-2018 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 SMART SM00662 23 233 2.2E-109 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF56553 53 177 7.59E-42 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 Gene3D G3DSA:3.30.1360.10 19 226 2.9E-83 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 1.1E-23 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF55257 6 232 4.51E-30 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 7.3E-110 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 35.081 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 307 3.3E-24 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 155 4.4E-25 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 328 1.0E-36 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 Gene3D G3DSA:2.170.120.12 53 176 2.9E-83 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0857 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF47789 250 323 8.89E-26 T 12-10-2018 PA257_2326 ead25dd55c9f6511795cbd4bd264d74d 154 Gene3D G3DSA:3.40.50.2300 1 153 7.9E-55 T 12-10-2018 PA257_2326 ead25dd55c9f6511795cbd4bd264d74d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 2.2E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PA257_2326 ead25dd55c9f6511795cbd4bd264d74d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 2.2E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PA257_2326 ead25dd55c9f6511795cbd4bd264d74d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 121 136 2.2E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PA257_2326 ead25dd55c9f6511795cbd4bd264d74d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 2.2E-23 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PA257_2326 ead25dd55c9f6511795cbd4bd264d74d 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 147 3.5E-40 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PA257_2326 ead25dd55c9f6511795cbd4bd264d74d 154 SUPERFAMILY SSF52788 1 147 2.09E-47 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily PA257_2326 ead25dd55c9f6511795cbd4bd264d74d 154 SMART SM00226 1 149 1.8E-47 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PA257_6133 8caa4acd482d69c22841f9587af12802 197 Pfam PF01914 MarC family integral membrane protein 2 193 7.2E-37 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PA257_6133 8caa4acd482d69c22841f9587af12802 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 190 4.5E-32 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 SUPERFAMILY SSF55874 282 444 1.44E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 SMART SM00388 234 293 4.4E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 Gene3D G3DSA:3.30.565.10 329 446 1.9E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 SMART SM00304 177 233 1.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 Gene3D G3DSA:3.30.450.170 26 149 9.1E-53 T 12-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 Pfam PF00672 HAMP domain 177 229 2.3E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 444 2.1E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 4.0E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 4.0E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 4.0E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 Gene3D G3DSA:1.10.287.130 181 294 8.4E-17 T 12-10-2018 PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 Pfam PF16750 Sensor domain of 2-component histidine kinase 38 148 1.2E-36 T 12-10-2018 IPR031930 2-component histidine kinase, sensor domain PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 SUPERFAMILY SSF158472 177 229 1.31E-5 T 12-10-2018 PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 SUPERFAMILY SSF47384 217 292 8.44E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 SMART SM00387 338 446 1.3E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2863 686a4442cd1a2b2db1c48f42daf50068 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 292 2.7E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 Pfam PF00702 haloacid dehalogenase-like hydrolase 339 543 1.7E-27 T 12-10-2018 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 Gene3D G3DSA:3.40.1110.10 351 462 5.9E-61 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 Gene3D G3DSA:2.70.150.20 141 253 4.6E-31 T 12-10-2018 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 Pfam PF00122 E1-E2 ATPase 148 320 4.9E-48 T 12-10-2018 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 98 639 1.2E-150 T 12-10-2018 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 SUPERFAMILY SSF81653 155 248 2.75E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 SUPERFAMILY SSF56784 339 634 4.31E-40 T 12-10-2018 IPR036412 HAD-like superfamily PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 455 466 8.2E-17 T 12-10-2018 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 340 354 8.2E-17 T 12-10-2018 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 198 212 8.2E-17 T 12-10-2018 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 567 8.2E-17 T 12-10-2018 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 550 8.2E-17 T 12-10-2018 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 122 612 2.9E-59 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 98 637 8.4E-161 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 Gene3D G3DSA:3.40.50.1000 321 583 5.9E-61 T 12-10-2018 IPR023214 HAD superfamily PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 342 348 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PA257_3194 f9995a99e7e3af64254a06c5248349c3 660 SUPERFAMILY SSF81665 100 334 7.06E-12 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PA257_6613 3de97bb804fd9a3de942051c9bb66206 376 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 31 358 5.5E-98 T 12-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.2090.10 178 268 2.0E-294 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82866 290 490 3.4E-53 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:1.20.1640.10 501 999 2.0E-294 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 Pfam PF00873 AcrB/AcrD/AcrF family 6 1002 9.0E-274 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.70.1430 555 647 2.0E-294 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82714 183 264 3.53E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82693 650 832 1.88E-15 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82866 808 1003 4.19E-44 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 2.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.1E-75 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82693 553 650 4.45E-23 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82714 699 781 7.06E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.2090.10 698 786 2.0E-294 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:1.20.1640.10 10 500 2.0E-294 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82693 137 323 6.28E-24 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.70.1440 648 841 2.0E-294 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82693 42 132 4.45E-20 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.70.1430 40 794 2.0E-294 T 12-10-2018 PA257_5440 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.70.1320 134 325 2.0E-294 T 12-10-2018 PA257_5450 05c3f168abc150d246fef0dbe490290f 228 Gene3D G3DSA:1.10.8.10 155 217 1.1E-7 T 12-10-2018 PA257_5450 05c3f168abc150d246fef0dbe490290f 228 Pfam PF08857 Putative ParB-like nuclease 32 187 1.4E-46 T 12-10-2018 IPR014956 Putative ParB-like nuclease PA257_5450 05c3f168abc150d246fef0dbe490290f 228 PIRSF PIRSF029669 15 228 2.2E-82 T 12-10-2018 IPR016932 Uncharacterised conserved protein UCP029669 PA257_5450 05c3f168abc150d246fef0dbe490290f 228 Gene3D G3DSA:3.90.1530.10 25 154 7.2E-38 T 12-10-2018 PA257_5450 05c3f168abc150d246fef0dbe490290f 228 SUPERFAMILY SSF110849 29 225 7.85E-58 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PA257_6299 1b3e70bc5152d465759fe94944f1260f 355 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 314 1.1E-84 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 PA257_6299 1b3e70bc5152d465759fe94944f1260f 355 Gene3D G3DSA:3.40.50.2000 1 163 2.9E-59 T 12-10-2018 PA257_6299 1b3e70bc5152d465759fe94944f1260f 355 Gene3D G3DSA:3.40.50.2000 168 309 1.9E-47 T 12-10-2018 PA257_6299 1b3e70bc5152d465759fe94944f1260f 355 SUPERFAMILY SSF53756 1 348 3.45E-84 T 12-10-2018 PA257_6299 1b3e70bc5152d465759fe94944f1260f 355 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 296 2.9E-113 T 12-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 PA257_4558 681b82e2e74e967d2c6ed16593e90660 590 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 497 507 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site PA257_4558 681b82e2e74e967d2c6ed16593e90660 590 PRINTS PR00723 Subtilisin serine protease family (S8) signature 295 308 1.5E-6 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related PA257_4558 681b82e2e74e967d2c6ed16593e90660 590 PRINTS PR00723 Subtilisin serine protease family (S8) signature 253 272 1.5E-6 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related PA257_4558 681b82e2e74e967d2c6ed16593e90660 590 PRINTS PR00723 Subtilisin serine protease family (S8) signature 496 512 1.5E-6 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related PA257_4558 681b82e2e74e967d2c6ed16593e90660 590 Pfam PF00082 Subtilase family 258 535 3.6E-21 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PA257_4558 681b82e2e74e967d2c6ed16593e90660 590 PIRSF PIRSF029389 1 590 0.0 T 12-10-2018 IPR016916 Uncharacterised conserved protein UCP029389, subtilisin-related PA257_4558 681b82e2e74e967d2c6ed16593e90660 590 Gene3D G3DSA:3.40.50.200 190 581 2.7E-33 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 PA257_4558 681b82e2e74e967d2c6ed16593e90660 590 SUPERFAMILY SSF52743 242 539 3.14E-36 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 PA257_4978 a39a474e2cdf06567ad4e11bf991575c 310 Gene3D G3DSA:3.40.710.10 16 301 3.9E-64 T 12-10-2018 PA257_4978 a39a474e2cdf06567ad4e11bf991575c 310 SUPERFAMILY SSF56601 8 276 2.3E-60 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_4978 a39a474e2cdf06567ad4e11bf991575c 310 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 260 1.4E-88 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PA257_4978 a39a474e2cdf06567ad4e11bf991575c 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.3E-13 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PA257_4978 a39a474e2cdf06567ad4e11bf991575c 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 1.3E-13 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PA257_4978 a39a474e2cdf06567ad4e11bf991575c 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 1.3E-13 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PA257_0040 fd0a634b69fa944aad0ae0bfe0057304 503 SUPERFAMILY SSF53649 2 478 3.49E-114 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_0040 fd0a634b69fa944aad0ae0bfe0057304 503 ProSitePatterns PS00149 Sulfatases signature 2. 94 104 - T 12-10-2018 IPR024607 Sulfatase, conserved site PA257_0040 fd0a634b69fa944aad0ae0bfe0057304 503 Pfam PF00884 Sulfatase 5 347 3.1E-52 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PA257_0040 fd0a634b69fa944aad0ae0bfe0057304 503 Pfam PF12411 Choline sulfatase enzyme C terminal 449 500 1.4E-24 T 12-10-2018 IPR025863 Choline sulfatase enzyme C-terminal domain PA257_0040 fd0a634b69fa944aad0ae0bfe0057304 503 Gene3D G3DSA:3.40.720.10 4 456 9.3E-112 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_0040 fd0a634b69fa944aad0ae0bfe0057304 503 TIGRFAM TIGR03417 chol_sulfatase: choline-sulfatase 4 501 1.3E-265 T 12-10-2018 IPR017785 Choline-sulfatase PA257_2348 af553133af67f33c3b8be1f179b2e740 377 SUPERFAMILY SSF53383 7 374 1.89E-80 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_2348 af553133af67f33c3b8be1f179b2e740 377 Gene3D G3DSA:3.40.640.10 26 283 4.7E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_2348 af553133af67f33c3b8be1f179b2e740 377 Gene3D G3DSA:3.90.1150.10 14 366 4.7E-104 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_2348 af553133af67f33c3b8be1f179b2e740 377 Pfam PF00266 Aminotransferase class-V 16 348 5.7E-52 T 12-10-2018 IPR000192 Aminotransferase class V domain PA257_2501 d0326c5a643d5dcd33d1103a1a61125d 315 SUPERFAMILY SSF53850 110 312 1.29E-31 T 12-10-2018 PA257_2501 d0326c5a643d5dcd33d1103a1a61125d 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 58 6.3E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2501 d0326c5a643d5dcd33d1103a1a61125d 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 58 69 6.3E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2501 d0326c5a643d5dcd33d1103a1a61125d 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 6.3E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2501 d0326c5a643d5dcd33d1103a1a61125d 315 SUPERFAMILY SSF46785 21 102 2.39E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2501 d0326c5a643d5dcd33d1103a1a61125d 315 Gene3D G3DSA:3.40.190.10 107 305 7.9E-32 T 12-10-2018 PA257_2501 d0326c5a643d5dcd33d1103a1a61125d 315 Pfam PF03466 LysR substrate binding domain 106 312 3.5E-33 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2501 d0326c5a643d5dcd33d1103a1a61125d 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 22 80 2.4E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2501 d0326c5a643d5dcd33d1103a1a61125d 315 Gene3D G3DSA:3.40.190.10 181 287 7.9E-32 T 12-10-2018 PA257_2501 d0326c5a643d5dcd33d1103a1a61125d 315 Gene3D G3DSA:1.10.10.10 15 104 6.7E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 Gene3D G3DSA:3.50.50.60 162 283 4.1E-130 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 5.5E-82 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 5.5E-82 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 5.5E-82 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 5.5E-82 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.5E-82 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 5.5E-82 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 5.5E-82 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 5.5E-82 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 5.5E-82 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 1.7E-71 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 Gene3D G3DSA:3.30.390.30 352 478 1.5E-49 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 8.5E-42 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.5E-42 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 8.5E-42 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 8.5E-42 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 8.5E-42 T 12-10-2018 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 SUPERFAMILY SSF55424 349 473 2.58E-42 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 SUPERFAMILY SSF51905 1 344 4.04E-65 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 5.3E-164 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 PIRSF PIRSF000350 1 471 2.8E-90 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 Gene3D G3DSA:3.50.50.60 5 341 4.1E-130 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4196 abf6747f8de05ca23e86d7bfd75c174e 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 462 3.6E-39 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 Pfam PF02254 TrkA-N domain 3 105 1.4E-26 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 Pfam PF02254 TrkA-N domain 234 349 2.6E-23 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 SUPERFAMILY SSF51735 1 150 9.86E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 Gene3D G3DSA:3.40.50.720 232 365 3.9E-35 T 12-10-2018 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 SUPERFAMILY SSF51735 231 375 1.84E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 SUPERFAMILY SSF116726 361 436 4.19E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 Pfam PF02080 TrkA-C domain 156 221 2.6E-12 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 Pfam PF02080 TrkA-C domain 389 450 2.8E-12 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 Gene3D G3DSA:3.30.70.1450 139 231 6.2E-24 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 SUPERFAMILY SSF116726 135 221 1.15E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 Gene3D G3DSA:3.40.50.720 2 138 5.8E-47 T 12-10-2018 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 Gene3D G3DSA:3.30.70.1450 366 457 4.2E-30 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.7E-30 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.7E-30 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.7E-30 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.7E-30 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PA257_0025 c8a4077bcb25411999c4693f7bf1fec9 457 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.7E-30 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PA257_5408 b312c96d30fea15509ee9a681590ac03 406 PIRSF PIRSF005962 4 391 9.9E-121 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 PA257_5408 b312c96d30fea15509ee9a681590ac03 406 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 374 8.7E-108 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 PA257_5408 b312c96d30fea15509ee9a681590ac03 406 SUPERFAMILY SSF55031 188 300 1.57E-30 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PA257_5408 b312c96d30fea15509ee9a681590ac03 406 Gene3D G3DSA:3.30.70.360 185 299 4.3E-132 T 12-10-2018 PA257_5408 b312c96d30fea15509ee9a681590ac03 406 Pfam PF07687 Peptidase dimerisation domain 192 286 3.9E-11 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain PA257_5408 b312c96d30fea15509ee9a681590ac03 406 Pfam PF01546 Peptidase family M20/M25/M40 77 385 4.4E-34 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 PA257_5408 b312c96d30fea15509ee9a681590ac03 406 SUPERFAMILY SSF53187 6 389 1.08E-87 T 12-10-2018 PA257_5408 b312c96d30fea15509ee9a681590ac03 406 Gene3D G3DSA:3.40.630.10 20 373 4.3E-132 T 12-10-2018 PA257_3842 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 SUPERFAMILY SSF50475 13 214 2.16E-52 T 12-10-2018 PA257_3842 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 45 122 1.3E-17 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_3842 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 180 214 1.4E-9 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_3842 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 184 197 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_3842 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 26 214 6.3E-45 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_3842 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Gene3D G3DSA:2.30.110.10 1 214 1.2E-68 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PA257_3842 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 PIRSF PIRSF000190 2 214 1.0E-60 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_0879 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 SUPERFAMILY SSF50475 13 214 2.16E-52 T 12-10-2018 PA257_0879 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 45 122 1.3E-17 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_0879 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 180 214 1.4E-9 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_0879 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 184 197 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_0879 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 26 214 6.3E-45 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_0879 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Gene3D G3DSA:2.30.110.10 1 214 1.2E-68 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PA257_0879 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 PIRSF PIRSF000190 2 214 1.0E-60 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_4822 ee94175697591c6c6698eb2ba91b2b2d 352 Gene3D G3DSA:3.40.50.10800 201 296 5.6E-97 T 12-10-2018 PA257_4822 ee94175697591c6c6698eb2ba91b2b2d 352 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 346 70.566 T 12-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PA257_4822 ee94175697591c6c6698eb2ba91b2b2d 352 Gene3D G3DSA:3.40.50.10800 34 321 5.6E-97 T 12-10-2018 PA257_4822 ee94175697591c6c6698eb2ba91b2b2d 352 Gene3D G3DSA:3.40.50.10800 116 339 5.6E-97 T 12-10-2018 PA257_4822 ee94175697591c6c6698eb2ba91b2b2d 352 SUPERFAMILY SSF142754 31 340 2.22E-109 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PA257_4822 ee94175697591c6c6698eb2ba91b2b2d 352 Pfam PF02445 Quinolinate synthetase A protein 34 339 3.4E-104 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PA257_4822 ee94175697591c6c6698eb2ba91b2b2d 352 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 30 341 9.3E-111 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PA257_4311 8f1e32981a1614958e0e5b37462f0650 407 SUPERFAMILY SSF48452 133 246 8.49E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4311 8f1e32981a1614958e0e5b37462f0650 407 Gene3D G3DSA:1.25.40.10 119 180 1.3E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4311 8f1e32981a1614958e0e5b37462f0650 407 SMART SM00028 150 183 0.49 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_4311 8f1e32981a1614958e0e5b37462f0650 407 SMART SM00028 221 254 17.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_4311 8f1e32981a1614958e0e5b37462f0650 407 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 116 3.5E-30 T 12-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI PA257_4311 8f1e32981a1614958e0e5b37462f0650 407 Gene3D G3DSA:1.25.40.10 181 271 5.3E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_3537 3a6a0082fa20ab685b1ee32a77930552 88 Pfam PF00128 Alpha amylase, catalytic domain 28 58 2.6E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3537 3a6a0082fa20ab685b1ee32a77930552 88 SUPERFAMILY SSF51445 5 57 3.95E-17 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_3537 3a6a0082fa20ab685b1ee32a77930552 88 Gene3D G3DSA:3.20.20.80 9 58 9.5E-19 T 12-10-2018 PA257_3564 7e55d4aa7722cd5222a90d4ad1077f38 926 Gene3D G3DSA:3.30.1590.10 93 195 1.3E-19 T 12-10-2018 PA257_3564 7e55d4aa7722cd5222a90d4ad1077f38 926 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 4 918 4.2E-283 T 12-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 PA257_3564 7e55d4aa7722cd5222a90d4ad1077f38 926 Gene3D G3DSA:3.20.20.80 212 410 1.6E-35 T 12-10-2018 PA257_3564 7e55d4aa7722cd5222a90d4ad1077f38 926 Gene3D G3DSA:3.20.20.80 715 821 6.7E-36 T 12-10-2018 PA257_3564 7e55d4aa7722cd5222a90d4ad1077f38 926 SUPERFAMILY SSF51445 4 818 1.22E-132 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_3564 7e55d4aa7722cd5222a90d4ad1077f38 926 SMART SM00642 12 506 2.1E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3564 7e55d4aa7722cd5222a90d4ad1077f38 926 Gene3D G3DSA:3.20.20.80 2 92 3.3E-25 T 12-10-2018 PA257_3564 7e55d4aa7722cd5222a90d4ad1077f38 926 Gene3D G3DSA:1.10.10.470 610 714 1.4E-16 T 12-10-2018 PA257_3564 7e55d4aa7722cd5222a90d4ad1077f38 926 Pfam PF00128 Alpha amylase, catalytic domain 25 94 5.4E-15 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_0336 78372449a41c39864b9cbfff70ce1875 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 68 9.0E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0336 78372449a41c39864b9cbfff70ce1875 310 Gene3D G3DSA:1.10.10.10 3 91 3.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0336 78372449a41c39864b9cbfff70ce1875 310 Gene3D G3DSA:3.40.190.10 178 275 5.5E-45 T 12-10-2018 PA257_0336 78372449a41c39864b9cbfff70ce1875 310 SUPERFAMILY SSF53850 94 300 1.54E-31 T 12-10-2018 PA257_0336 78372449a41c39864b9cbfff70ce1875 310 Gene3D G3DSA:3.40.190.10 94 300 5.5E-45 T 12-10-2018 PA257_0336 78372449a41c39864b9cbfff70ce1875 310 Pfam PF03466 LysR substrate binding domain 98 301 5.4E-26 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0336 78372449a41c39864b9cbfff70ce1875 310 SUPERFAMILY SSF46785 8 87 4.15E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Pfam PF07244 Surface antigen variable number repeat 92 171 1.8E-13 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Pfam PF07244 Surface antigen variable number repeat 175 262 2.3E-17 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Pfam PF07244 Surface antigen variable number repeat 347 420 1.0E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Pfam PF07244 Surface antigen variable number repeat 265 343 4.2E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 23 788 8.3E-267 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:3.10.20.310 91 172 6.5E-19 T 12-10-2018 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:3.10.20.310 346 420 8.0E-25 T 12-10-2018 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:3.10.20.310 264 345 7.0E-19 T 12-10-2018 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:2.40.160.50 422 788 1.1E-117 T 12-10-2018 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 788 25.933 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Pfam PF01103 Surface antigen 447 788 9.2E-97 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:3.10.20.310 174 263 9.5E-23 T 12-10-2018 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:3.10.20.310 17 90 8.1E-19 T 12-10-2018 PA257_1573 5f69e5294f5649bcf9543c3a34af02d6 788 PIRSF PIRSF006076 1 788 1.3E-266 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 SUPERFAMILY SSF64484 11 1357 0.0 T 12-10-2018 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04560 RNA polymerase Rpb2, domain 7 1281 1356 4.3E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1110.10 298 443 6.2E-35 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1354 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.50.150 838 958 3.8E-45 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1100.10 18 176 4.3E-57 T 12-10-2018 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1100.10 648 718 1.6E-21 T 12-10-2018 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.50.100 719 793 4.2E-33 T 12-10-2018 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.270.10 795 837 9.6E-6 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04565 RNA polymerase Rpb2, domain 3 518 585 4.6E-31 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF00562 RNA polymerase Rpb2, domain 6 722 1279 2.3E-160 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1357 12.349 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04563 RNA polymerase beta subunit 26 504 6.3E-41 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.270.10 1052 1257 2.9E-87 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF10385 RNA polymerase beta subunit external 1 domain 596 661 4.7E-20 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 227 1.8E-8 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 359 459 1.1E-14 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1800.10 1267 1320 8.4E-11 T 12-10-2018 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1100.10 444 640 2.9E-72 T 12-10-2018 PA257_0825 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1080 1092 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05860 haemagglutination activity domain 33 166 1.4E-33 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF13930 DNA/RNA non-specific endonuclease 3404 3527 1.2E-35 T 12-10-2018 PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 SUPERFAMILY SSF51126 45 294 1.41E-63 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Gene3D G3DSA:2.160.20.10 35 328 2.0E-99 T 12-10-2018 IPR012334 Pectin lyase fold PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF04830 Possible hemagglutinin (DUF637) 2953 3113 3.1E-45 T 12-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 1557 1618 87.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 715 769 0.0024 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 216 292 7.3E-8 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 2041 2095 95.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 1475 1550 0.0074 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 1041 1091 0.22 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 471 540 0.017 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 2158 2185 11.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 823 874 1.8E-6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 1910 1982 0.39 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 1278 1338 3.0E-4 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 1670 1736 1.9 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 2575 2614 32.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 407 460 1.3E-6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 2485 2531 12.0 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 635 697 0.085 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 1133 1201 6.6E-7 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF05594 Haemagluttinin repeat 1343 1432 1.7E-6 T 12-10-2018 IPR008619 Filamentous haemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF13332 Haemagluttinin repeat 2627 2693 1.6E-5 T 12-10-2018 IPR025157 Hemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF13332 Haemagluttinin repeat 2774 2838 8.0E-5 T 12-10-2018 IPR025157 Hemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 Pfam PF13332 Haemagluttinin repeat 2696 2754 2.8E-5 T 12-10-2018 IPR025157 Hemagglutinin repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 66 163 1.2E-17 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1867 1903 6.7E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 505 540 2.4E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2511 2547 0.043 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1581 1613 0.49 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2492 2531 6.7E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1447 1484 2.0E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1382 1421 2.5E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1296 1337 0.022 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1662 1700 4.8E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1149 1185 2.4E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1486 1529 0.026 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1410 1443 0.064 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 958 1001 0.025 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 585 625 1.1E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1530 1571 7.2E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1045 1084 0.0036 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 812 852 9.2E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1108 1148 0.0036 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 770 809 4.8E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2044 2083 0.007 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 937 969 1.1 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1190 1220 0.0015 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1340 1380 3.6E-9 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1088 1126 0.0024 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 606 644 3.4E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 853 892 1.2E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 311 350 0.39 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1003 1042 1.2E-9 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 379 418 6.6E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 419 460 5.0E-7 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1905 1942 1.6E-6 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1254 1294 0.0016 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 688 727 3.4E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 729 769 8.0E-8 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2580 2611 0.55 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 895 935 1.9E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1219 1252 3.6E-5 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 462 501 0.019 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 542 582 2.3E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0051 0d9b7a0ac9de5d5f1cd715d695ec774e 3543 SMART SM00912 47 168 4.7E-46 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_3711 455ddd1e594a10e0d3aa16efb70e420a 333 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 9 318 2.2E-102 T 12-10-2018 IPR016833 Putative sodium bile acid cotransporter PA257_3711 455ddd1e594a10e0d3aa16efb70e420a 333 Gene3D G3DSA:1.20.1530.20 3 320 7.1E-39 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_3711 455ddd1e594a10e0d3aa16efb70e420a 333 PIRSF PIRSF026166 1 332 2.7E-141 T 12-10-2018 IPR016833 Putative sodium bile acid cotransporter PA257_4777 62a5de0d894db90d2a9a9be8b654d29f 714 Pfam PF13307 Helicase C-terminal domain 553 708 4.3E-34 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PA257_4777 62a5de0d894db90d2a9a9be8b654d29f 714 Gene3D G3DSA:3.40.50.300 23 302 3.3E-35 T 12-10-2018 PA257_4777 62a5de0d894db90d2a9a9be8b654d29f 714 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 32 714 38.623 T 12-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 PA257_4777 62a5de0d894db90d2a9a9be8b654d29f 714 SMART SM00491 562 695 1.1E-29 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PA257_4777 62a5de0d894db90d2a9a9be8b654d29f 714 Gene3D G3DSA:3.40.50.300 526 712 4.0E-32 T 12-10-2018 PA257_4777 62a5de0d894db90d2a9a9be8b654d29f 714 SUPERFAMILY SSF52540 57 689 8.54E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 205 593 42.347 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 44 171 1.5E-41 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 Gene3D G3DSA:1.10.645.20 208 593 2.2E-147 T 12-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 209 593 3.9E-172 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 43 170 3.1E-42 T 12-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 323 593 2.3E-106 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 10 593 71.848 T 12-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 246 257 - T 12-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 SUPERFAMILY SSF143243 18 223 4.58E-60 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 Gene3D G3DSA:3.30.460.80 10 151 6.2E-34 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 99 154 1.0E-26 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 SUPERFAMILY SSF56762 219 593 5.89E-123 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2916 f7e72e4e6d8842b628980b50c71da063 593 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 19 179 25.66 T 12-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_1085 e064fb5a1db3b6096b0d7fdc07646611 421 Pfam PF02687 FtsX-like permease family 319 412 7.4E-13 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PA257_1085 e064fb5a1db3b6096b0d7fdc07646611 421 Pfam PF12704 MacB-like periplasmic core domain 19 261 1.1E-12 T 12-10-2018 IPR025857 MacB-like periplasmic core domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Gene3D G3DSA:3.40.190.10 123 217 2.0E-70 T 12-10-2018 PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Gene3D G3DSA:3.30.450.20 678 806 9.3E-36 T 12-10-2018 PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00062 38 258 7.5E-33 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Gene3D G3DSA:3.30.450.20 427 548 9.5E-21 T 12-10-2018 PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Gene3D G3DSA:3.40.190.10 28 254 2.0E-70 T 12-10-2018 PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Gene3D G3DSA:3.30.450.20 321 426 1.1E-22 T 12-10-2018 PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00086 510 550 3.5 T 12-10-2018 IPR001610 PAC motif PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00086 635 675 83.0 T 12-10-2018 IPR001610 PAC motif PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00086 386 426 2.5E-5 T 12-10-2018 IPR001610 PAC motif PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00086 755 797 5.5E-5 T 12-10-2018 IPR001610 PAC motif PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00052 979 1225 1.3E-123 T 12-10-2018 IPR001633 EAL domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Pfam PF00990 Diguanylate cyclase, GGDEF domain 808 965 6.7E-54 T 12-10-2018 IPR000160 GGDEF domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Gene3D G3DSA:3.30.450.20 558 673 3.3E-21 T 12-10-2018 PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SUPERFAMILY SSF55785 423 548 2.09E-19 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00091 312 380 0.0026 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00091 438 505 1.8E-5 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00091 683 749 6.9E-8 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00091 562 629 6.6E-6 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 436 556 5.7E-12 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 687 804 5.5E-20 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 308 432 4.8E-14 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 560 682 3.3E-16 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SMART SM00267 797 969 2.1E-71 T 12-10-2018 IPR000160 GGDEF domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SUPERFAMILY SSF53850 39 256 4.04E-51 T 12-10-2018 PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SUPERFAMILY SSF55073 813 970 4.79E-54 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SUPERFAMILY SSF55785 688 795 5.24E-29 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SUPERFAMILY SSF141868 984 1231 1.7E-89 T 12-10-2018 IPR035919 EAL domain superfamily PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Pfam PF08447 PAS fold 336 408 3.0E-10 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 804 968 1.6E-44 T 12-10-2018 IPR000160 GGDEF domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Gene3D G3DSA:3.30.70.270 807 981 4.3E-64 T 12-10-2018 PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SUPERFAMILY SSF55785 547 673 2.97E-19 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 256 4.2E-37 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Pfam PF00563 EAL domain 985 1220 3.1E-77 T 12-10-2018 IPR001633 EAL domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Gene3D G3DSA:3.20.20.450 982 1232 7.6E-103 T 12-10-2018 IPR035919 EAL domain superfamily PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Pfam PF13426 PAS domain 694 795 7.3E-16 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Pfam PF13426 PAS domain 572 674 2.0E-8 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 Pfam PF13426 PAS domain 448 548 1.3E-5 T 12-10-2018 IPR000014 PAS domain PA257_0722 58b6a804b94e8866765cdbf720e2f16a 1245 SUPERFAMILY SSF55785 297 424 1.82E-20 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0360 5fa31dcc825716b3388c6de922df2f64 221 Gene3D G3DSA:1.10.357.10 16 202 1.3E-28 T 12-10-2018 PA257_0360 5fa31dcc825716b3388c6de922df2f64 221 SUPERFAMILY SSF46689 11 82 1.59E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0360 5fa31dcc825716b3388c6de922df2f64 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0360 5fa31dcc825716b3388c6de922df2f64 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0360 5fa31dcc825716b3388c6de922df2f64 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 7.2E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4102 57cf38bdc8fb2666c21e763184a3f6c0 153 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 125 1.4E-35 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 PA257_4102 57cf38bdc8fb2666c21e763184a3f6c0 153 Pfam PF01814 Hemerythrin HHE cation binding domain 13 125 1.6E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 PA257_4102 57cf38bdc8fb2666c21e763184a3f6c0 153 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 12-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 PA257_4102 57cf38bdc8fb2666c21e763184a3f6c0 153 Gene3D G3DSA:1.20.120.50 2 131 7.1E-35 T 12-10-2018 IPR035938 Hemerythrin-like superfamily PA257_4102 57cf38bdc8fb2666c21e763184a3f6c0 153 Hamap MF_00556 Bacteriohemerythrin. 3 125 24.869 T 12-10-2018 IPR023504 Bacteriohemerythrin-like protein PA257_4102 57cf38bdc8fb2666c21e763184a3f6c0 153 SUPERFAMILY SSF47188 1 125 3.01E-32 T 12-10-2018 IPR035938 Hemerythrin-like superfamily PA257_6823 e6465b11a205f3b655e67184d1b1dfef 342 SMART SM00829 16 340 3.3E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_6823 e6465b11a205f3b655e67184d1b1dfef 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 136 3.2E-33 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_6823 e6465b11a205f3b655e67184d1b1dfef 342 Pfam PF00107 Zinc-binding dehydrogenase 181 304 4.2E-29 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_6823 e6465b11a205f3b655e67184d1b1dfef 342 SUPERFAMILY SSF51735 145 310 2.32E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6823 e6465b11a205f3b655e67184d1b1dfef 342 SUPERFAMILY SSF50129 2 340 2.59E-58 T 12-10-2018 IPR011032 GroES-like superfamily PA257_6823 e6465b11a205f3b655e67184d1b1dfef 342 Gene3D G3DSA:3.40.50.720 154 291 1.7E-146 T 12-10-2018 PA257_6823 e6465b11a205f3b655e67184d1b1dfef 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PA257_6823 e6465b11a205f3b655e67184d1b1dfef 342 Gene3D G3DSA:3.90.180.10 11 333 1.7E-146 T 12-10-2018 PA257_3294 3c22b2eea2e8db970735c3394a515445 366 SMART SM00930 285 360 8.4E-13 T 12-10-2018 IPR018449 NIL domain PA257_3294 3c22b2eea2e8db970735c3394a515445 366 Gene3D G3DSA:3.30.70.260 267 366 2.6E-9 T 12-10-2018 PA257_3294 3c22b2eea2e8db970735c3394a515445 366 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3294 3c22b2eea2e8db970735c3394a515445 366 SUPERFAMILY SSF55021 269 363 2.98E-13 T 12-10-2018 PA257_3294 3c22b2eea2e8db970735c3394a515445 366 Pfam PF09383 NIL domain 288 358 1.0E-11 T 12-10-2018 IPR018449 NIL domain PA257_3294 3c22b2eea2e8db970735c3394a515445 366 Pfam PF00005 ABC transporter 42 190 1.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3294 3c22b2eea2e8db970735c3394a515445 366 Gene3D G3DSA:3.40.50.300 16 266 7.8E-80 T 12-10-2018 PA257_3294 3c22b2eea2e8db970735c3394a515445 366 SUPERFAMILY SSF52540 26 260 3.77E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3294 3c22b2eea2e8db970735c3394a515445 366 SMART SM00382 51 238 1.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6513 26261d06e50792adf1b13dc67efde0a5 302 Gene3D G3DSA:3.40.50.720 4 283 3.0E-108 T 12-10-2018 PA257_6513 26261d06e50792adf1b13dc67efde0a5 302 SUPERFAMILY SSF51735 1 296 6.04E-96 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6513 26261d06e50792adf1b13dc67efde0a5 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 295 1.7E-115 T 12-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 PA257_6513 26261d06e50792adf1b13dc67efde0a5 302 Pfam PF04321 RmlD substrate binding domain 3 296 8.7E-112 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 PA257_6513 26261d06e50792adf1b13dc67efde0a5 302 Gene3D G3DSA:3.90.25.10 159 286 3.0E-108 T 12-10-2018 PA257_4268 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 Gene3D G3DSA:3.20.20.140 72 389 6.1E-193 T 12-10-2018 PA257_4268 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 427 2.4E-186 T 12-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 PA257_4268 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 Pfam PF01979 Amidohydrolase family 69 430 8.9E-71 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_4268 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 SUPERFAMILY SSF51338 29 88 1.94E-10 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_4268 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 Gene3D G3DSA:2.30.40.10 9 425 6.1E-193 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_4268 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 SUPERFAMILY SSF51556 71 374 4.0E-104 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_1293 a9c06c2a6681eeb061e036b42421fdcb 246 Gene3D G3DSA:1.10.4070.10 72 153 4.7E-13 T 12-10-2018 PA257_1293 a9c06c2a6681eeb061e036b42421fdcb 246 SUPERFAMILY SSF89155 6 166 6.41E-30 T 12-10-2018 IPR036411 TorD-like superfamily PA257_1293 a9c06c2a6681eeb061e036b42421fdcb 246 Gene3D G3DSA:1.20.120.700 8 164 4.7E-13 T 12-10-2018 PA257_1293 a9c06c2a6681eeb061e036b42421fdcb 246 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 13 164 3.6E-35 T 12-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 PA257_1293 a9c06c2a6681eeb061e036b42421fdcb 246 Pfam PF02613 Nitrate reductase delta subunit 39 161 3.6E-11 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone PA257_2017 6e39326680b710a197313deb19bf2cb3 721 SUPERFAMILY SSF56935 35 721 7.63E-118 T 12-10-2018 PA257_2017 6e39326680b710a197313deb19bf2cb3 721 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 704 721 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_2017 6e39326680b710a197313deb19bf2cb3 721 Gene3D G3DSA:2.170.130.10 48 173 3.6E-31 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_2017 6e39326680b710a197313deb19bf2cb3 721 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 721 2.2E-95 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_2017 6e39326680b710a197313deb19bf2cb3 721 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 164 2.6E-21 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_2017 6e39326680b710a197313deb19bf2cb3 721 Gene3D G3DSA:2.40.170.20 177 721 5.2E-119 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_2017 6e39326680b710a197313deb19bf2cb3 721 Pfam PF00593 TonB dependent receptor 240 718 1.1E-55 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_4355 85648d9bca3301b7fe8c912792919780 473 Gene3D G3DSA:1.10.287.130 185 302 2.2E-24 T 12-10-2018 PA257_4355 85648d9bca3301b7fe8c912792919780 473 SMART SM00388 235 301 9.6E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4355 85648d9bca3301b7fe8c912792919780 473 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 451 1.4E-178 T 12-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PA257_4355 85648d9bca3301b7fe8c912792919780 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 1.4E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4355 85648d9bca3301b7fe8c912792919780 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 1.4E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4355 85648d9bca3301b7fe8c912792919780 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.4E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4355 85648d9bca3301b7fe8c912792919780 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 449 1.8E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4355 85648d9bca3301b7fe8c912792919780 473 SMART SM00387 344 455 2.1E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4355 85648d9bca3301b7fe8c912792919780 473 SMART SM00304 181 234 2.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4355 85648d9bca3301b7fe8c912792919780 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 301 2.2E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4355 85648d9bca3301b7fe8c912792919780 473 SUPERFAMILY SSF47384 218 302 1.96E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4355 85648d9bca3301b7fe8c912792919780 473 SUPERFAMILY SSF55874 290 447 6.16E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4355 85648d9bca3301b7fe8c912792919780 473 Gene3D G3DSA:3.30.565.10 306 456 9.2E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 2.2E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 2.2E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 2.2E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 2.2E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 2.2E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 2.2E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 SUPERFAMILY SSF52096 5 314 4.42E-104 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 3.0E-157 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.552 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 Gene3D G3DSA:3.90.226.10 1 315 6.5E-118 T 12-10-2018 PA257_1582 d4e293f898d696d6f7b19c040ecdcd6d 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 4.8E-64 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PA257_0401 6b6ff7c984edea64a1ee43e09081cef4 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 219 8.2E-65 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 PA257_0401 6b6ff7c984edea64a1ee43e09081cef4 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 221 33.609 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 PA257_0401 6b6ff7c984edea64a1ee43e09081cef4 223 Gene3D G3DSA:3.30.70.260 129 200 6.8E-82 T 12-10-2018 PA257_0401 6b6ff7c984edea64a1ee43e09081cef4 223 Gene3D G3DSA:3.40.50.1360 7 217 6.8E-82 T 12-10-2018 PA257_0401 6b6ff7c984edea64a1ee43e09081cef4 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 217 1.0E-57 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 PA257_0401 6b6ff7c984edea64a1ee43e09081cef4 223 SUPERFAMILY SSF100950 1 150 2.7E-42 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_0401 6b6ff7c984edea64a1ee43e09081cef4 223 SUPERFAMILY SSF75445 131 202 7.98E-24 T 12-10-2018 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 Pfam PF00672 HAMP domain 298 349 8.6E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 Gene3D G3DSA:1.10.287.950 298 629 5.3E-75 T 12-10-2018 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 SMART SM00283 367 628 3.6E-98 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 SUPERFAMILY SSF58104 320 629 1.96E-75 T 12-10-2018 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 Gene3D G3DSA:3.30.450.20 54 272 5.0E-74 T 12-10-2018 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 594 2.3E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 Pfam PF02743 Cache domain 36 260 4.2E-32 T 12-10-2018 IPR033479 Double Cache domain 1 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 Gene3D G3DSA:3.30.450.20 66 174 5.0E-74 T 12-10-2018 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 523 7.7E-9 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 410 7.7E-9 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 SMART SM00304 298 352 5.8E-15 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 SMART SM00304 387 447 18.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5371 3c5de909f3f78387759e25be89ed4141 629 SUPERFAMILY SSF103190 91 184 2.51E-14 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily PA257_1599 059654ea48634f38f111cdef38bf3a35 344 Pfam PF04542 Sigma-70 region 2 109 178 7.9E-22 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 2 343 40.836 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 SUPERFAMILY SSF88659 182 256 5.67E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_1599 059654ea48634f38f111cdef38bf3a35 344 PRINTS PR00046 Major sigma-70 factor signature 133 146 6.6E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 PRINTS PR00046 Major sigma-70 factor signature 157 165 6.6E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 PRINTS PR00046 Major sigma-70 factor signature 302 317 6.6E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 PRINTS PR00046 Major sigma-70 factor signature 281 293 6.6E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 PRINTS PR00046 Major sigma-70 factor signature 317 328 6.6E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 Pfam PF04545 Sigma-70, region 4 277 330 1.3E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 133 146 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 SUPERFAMILY SSF88946 71 179 3.01E-45 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 SUPERFAMILY SSF88659 240 337 2.78E-25 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_1599 059654ea48634f38f111cdef38bf3a35 344 Gene3D G3DSA:1.10.10.10 182 257 2.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1599 059654ea48634f38f111cdef38bf3a35 344 Pfam PF04539 Sigma-70 region 3 189 263 2.9E-20 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 64 343 2.5E-140 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 Pfam PF00140 Sigma-70 factor, region 1.2 71 103 3.4E-13 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 Gene3D G3DSA:1.10.601.10 35 178 1.2E-47 T 12-10-2018 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 106 332 3.3E-37 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 302 328 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_1599 059654ea48634f38f111cdef38bf3a35 344 Gene3D G3DSA:1.10.10.10 259 335 9.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5670 a205fbfa81fe2fe2d125863d2b64b6f6 749 SMART SM00487 57 410 1.2E-8 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_5670 a205fbfa81fe2fe2d125863d2b64b6f6 749 Pfam PF04851 Type III restriction enzyme, res subunit 61 136 7.4E-7 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PA257_5670 a205fbfa81fe2fe2d125863d2b64b6f6 749 SUPERFAMILY SSF52540 481 731 3.99E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5670 a205fbfa81fe2fe2d125863d2b64b6f6 749 Gene3D G3DSA:3.40.50.10810 65 162 3.9E-10 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PA257_5670 a205fbfa81fe2fe2d125863d2b64b6f6 749 Pfam PF00271 Helicase conserved C-terminal domain 573 685 2.6E-4 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_5670 a205fbfa81fe2fe2d125863d2b64b6f6 749 Gene3D G3DSA:3.40.50.10810 290 444 5.8E-7 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PA257_5670 a205fbfa81fe2fe2d125863d2b64b6f6 749 SUPERFAMILY SSF52540 56 394 5.71E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5670 a205fbfa81fe2fe2d125863d2b64b6f6 749 Gene3D G3DSA:3.40.50.300 485 744 9.7E-25 T 12-10-2018 PA257_5344 1d7866a5e887710124888d86b7efd76d 721 Pfam PF13604 AAA domain 213 380 1.3E-29 T 12-10-2018 PA257_5344 1d7866a5e887710124888d86b7efd76d 721 SUPERFAMILY SSF52540 343 678 1.06E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5344 1d7866a5e887710124888d86b7efd76d 721 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 35 701 5.8E-221 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 PA257_5344 1d7866a5e887710124888d86b7efd76d 721 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 43 699 48.879 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 PA257_5344 1d7866a5e887710124888d86b7efd76d 721 Gene3D G3DSA:3.40.50.300 164 419 1.3E-69 T 12-10-2018 PA257_5344 1d7866a5e887710124888d86b7efd76d 721 Pfam PF13538 UvrD-like helicase C-terminal domain 629 676 8.2E-15 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain PA257_5344 1d7866a5e887710124888d86b7efd76d 721 Gene3D G3DSA:1.10.10.1020 28 163 5.7E-21 T 12-10-2018 PA257_5344 1d7866a5e887710124888d86b7efd76d 721 SUPERFAMILY SSF52540 37 424 1.36E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5344 1d7866a5e887710124888d86b7efd76d 721 Gene3D G3DSA:3.40.50.300 429 558 3.4E-20 T 12-10-2018 PA257_5344 1d7866a5e887710124888d86b7efd76d 721 Gene3D G3DSA:3.40.50.300 559 690 9.1E-22 T 12-10-2018 PA257_5121 211ab62f75f5884d8a8ea441d5ceaf0d 387 Gene3D G3DSA:3.40.50.300 1 79 3.4E-8 T 12-10-2018 PA257_5121 211ab62f75f5884d8a8ea441d5ceaf0d 387 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 241 348 1.6E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_5121 211ab62f75f5884d8a8ea441d5ceaf0d 387 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 54 1.6E-6 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_5121 211ab62f75f5884d8a8ea441d5ceaf0d 387 PIRSF PIRSF029347 1 387 3.5E-172 T 12-10-2018 IPR014555 RecF-like PA257_5121 211ab62f75f5884d8a8ea441d5ceaf0d 387 SUPERFAMILY SSF52540 1 350 1.01E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5121 211ab62f75f5884d8a8ea441d5ceaf0d 387 Gene3D G3DSA:3.40.50.300 227 372 1.2E-8 T 12-10-2018 PA257_0124 fef2150f95140b4a69cf2f0cea5ae490 238 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 56 63 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_0124 fef2150f95140b4a69cf2f0cea5ae490 238 SUPERFAMILY SSF53056 9 223 1.18E-69 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 PA257_0124 fef2150f95140b4a69cf2f0cea5ae490 238 Gene3D G3DSA:3.40.1050.10 3 219 2.6E-74 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 PA257_0124 fef2150f95140b4a69cf2f0cea5ae490 238 SMART SM00947 44 211 1.5E-65 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_0124 fef2150f95140b4a69cf2f0cea5ae490 238 Pfam PF00484 Carbonic anhydrase 51 206 1.6E-50 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_0124 fef2150f95140b4a69cf2f0cea5ae490 238 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 99 119 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_6833 23417921b32004da26d70710c9d4dc01 471 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_6833 23417921b32004da26d70710c9d4dc01 471 SUPERFAMILY SSF52440 1 112 7.91E-45 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_6833 23417921b32004da26d70710c9d4dc01 471 SMART SM00878 334 440 1.2E-61 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_6833 23417921b32004da26d70710c9d4dc01 471 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 1.1E-42 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_6833 23417921b32004da26d70710c9d4dc01 471 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 320 2.4E-73 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_6833 23417921b32004da26d70710c9d4dc01 471 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 5.8E-41 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_6833 23417921b32004da26d70710c9d4dc01 471 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 2 443 5.1E-190 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 PA257_6833 23417921b32004da26d70710c9d4dc01 471 SUPERFAMILY SSF56059 82 346 1.1E-67 T 12-10-2018 PA257_6833 23417921b32004da26d70710c9d4dc01 471 Gene3D G3DSA:3.30.470.130 1 448 2.7E-189 T 12-10-2018 PA257_6833 23417921b32004da26d70710c9d4dc01 471 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_6833 23417921b32004da26d70710c9d4dc01 471 SUPERFAMILY SSF51246 329 445 3.09E-43 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PA257_0707 24b17f8130b8e93e20762f93fe120c32 112 Gene3D G3DSA:1.20.1290.10 1 112 3.2E-30 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_0707 24b17f8130b8e93e20762f93fe120c32 112 SUPERFAMILY SSF69118 5 111 1.24E-29 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_0707 24b17f8130b8e93e20762f93fe120c32 112 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 90 1.5E-19 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_0707 24b17f8130b8e93e20762f93fe120c32 112 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 1.4E-19 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_4465 bd997f3792843cf63effe873195a4779 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4465 bd997f3792843cf63effe873195a4779 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4465 bd997f3792843cf63effe873195a4779 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4465 bd997f3792843cf63effe873195a4779 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.2E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4465 bd997f3792843cf63effe873195a4779 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.2E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4465 bd997f3792843cf63effe873195a4779 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.2E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4465 bd997f3792843cf63effe873195a4779 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.2E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4465 bd997f3792843cf63effe873195a4779 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.2E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4465 bd997f3792843cf63effe873195a4779 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 178 0.0035 T 12-10-2018 PA257_4465 bd997f3792843cf63effe873195a4779 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_4465 bd997f3792843cf63effe873195a4779 259 Pfam PF00106 short chain dehydrogenase 4 188 1.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4465 bd997f3792843cf63effe873195a4779 259 Gene3D G3DSA:3.40.50.720 2 258 1.7E-54 T 12-10-2018 PA257_4465 bd997f3792843cf63effe873195a4779 259 SUPERFAMILY SSF51735 2 232 4.28E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 SUPERFAMILY SSF51735 9 253 1.18E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.0E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.0E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.0E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.0E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.0E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.0E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 251 9.0E-59 T 12-10-2018 PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 2.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 2.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6926 85d46aacf4e449fda52f7244be7d2213 260 Gene3D G3DSA:3.40.50.720 4 257 2.7E-75 T 12-10-2018 PA257_6501 3fdd0f294acef4a053104bfe6daa255e 68 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 34 58 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PA257_6501 3fdd0f294acef4a053104bfe6daa255e 68 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 64 6.8E-12 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PA257_6501 3fdd0f294acef4a053104bfe6daa255e 68 PRINTS PR00618 DksA/TraR zinc finger signature 34 45 5.8E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PA257_6501 3fdd0f294acef4a053104bfe6daa255e 68 PRINTS PR00618 DksA/TraR zinc finger signature 46 58 5.8E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PA257_6501 3fdd0f294acef4a053104bfe6daa255e 68 Gene3D G3DSA:1.20.120.910 2 67 3.8E-17 T 12-10-2018 PA257_6501 3fdd0f294acef4a053104bfe6daa255e 68 SUPERFAMILY SSF57716 33 65 6.27E-7 T 12-10-2018 PA257_6501 3fdd0f294acef4a053104bfe6daa255e 68 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 2 63 9.2E-24 T 12-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type PA257_1848 9a993b3cbae5727738af6fa619b24635 285 Pfam PF12680 SnoaL-like domain 40 138 3.5E-10 T 12-10-2018 IPR037401 SnoaL-like domain PA257_1848 9a993b3cbae5727738af6fa619b24635 285 Pfam PF12833 Helix-turn-helix domain 200 280 9.9E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1848 9a993b3cbae5727738af6fa619b24635 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 274 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_1848 9a993b3cbae5727738af6fa619b24635 285 SUPERFAMILY SSF54427 32 145 1.04E-18 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_1848 9a993b3cbae5727738af6fa619b24635 285 Gene3D G3DSA:3.10.450.50 31 145 7.4E-16 T 12-10-2018 PA257_1848 9a993b3cbae5727738af6fa619b24635 285 Gene3D G3DSA:1.10.10.60 174 226 2.6E-6 T 12-10-2018 PA257_1848 9a993b3cbae5727738af6fa619b24635 285 SMART SM00342 194 278 1.3E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1848 9a993b3cbae5727738af6fa619b24635 285 Gene3D G3DSA:1.10.10.60 227 284 5.2E-14 T 12-10-2018 PA257_1848 9a993b3cbae5727738af6fa619b24635 285 SUPERFAMILY SSF46689 246 280 8.51E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5842 2d60090dd3a199b30e2b3d63bf04c98b 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 220 3.4E-25 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_5842 2d60090dd3a199b30e2b3d63bf04c98b 305 Gene3D G3DSA:3.40.50.720 2 302 7.9E-80 T 12-10-2018 PA257_5842 2d60090dd3a199b30e2b3d63bf04c98b 305 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 2.0E-20 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 PA257_5842 2d60090dd3a199b30e2b3d63bf04c98b 305 SUPERFAMILY SSF51735 1 301 2.38E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5842 2d60090dd3a199b30e2b3d63bf04c98b 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 2.8E-110 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 Gene3D G3DSA:1.20.272.10 242 361 3.5E-43 T 12-10-2018 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 8.1E-131 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 SUPERFAMILY SSF52540 29 222 2.59E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 582 696 1.4E-16 T 12-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 Gene3D G3DSA:3.40.50.300 13 177 1.2E-103 T 12-10-2018 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 2.0E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 2.0E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 Gene3D G3DSA:3.30.300.150 576 685 1.4E-14 T 12-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.6E-44 T 12-10-2018 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 Gene3D G3DSA:1.10.8.60 8 240 1.2E-103 T 12-10-2018 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 SUPERFAMILY SSF48019 243 362 1.45E-33 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 SMART SM00382 37 179 7.6E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4256 23e4532cc8dbe2865b7bea6b4533d412 707 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 2.3E-33 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 PA257_0536 3b6134f0286aa1d8096839c3b3e50510 423 Pfam PF01979 Amidohydrolase family 193 419 2.7E-13 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_0536 3b6134f0286aa1d8096839c3b3e50510 423 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 421 4.3E-88 T 12-10-2018 PA257_0536 3b6134f0286aa1d8096839c3b3e50510 423 SUPERFAMILY SSF51556 56 367 2.72E-88 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_0536 3b6134f0286aa1d8096839c3b3e50510 423 SUPERFAMILY SSF51338 1 422 4.32E-24 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_0536 3b6134f0286aa1d8096839c3b3e50510 423 Gene3D G3DSA:2.30.40.10 9 419 3.0E-113 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_0536 3b6134f0286aa1d8096839c3b3e50510 423 Gene3D G3DSA:3.20.20.140 57 368 3.0E-113 T 12-10-2018 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 1.8E-7 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 SUPERFAMILY SSF50677 201 401 5.76E-54 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 Pfam PF08264 Anticodon-binding domain of tRNA 691 847 1.1E-27 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 849 1.6E-276 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 Gene3D G3DSA:1.10.730.20 646 935 2.6E-89 T 12-10-2018 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 SUPERFAMILY SSF47323 658 934 2.43E-77 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 3.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 3.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 3.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 235 258 3.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 3.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 Gene3D G3DSA:3.40.50.620 25 635 1.2E-225 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 9.8E-197 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 Gene3D G3DSA:3.90.740.10 192 406 1.2E-225 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 SUPERFAMILY SSF52374 3 652 4.22E-132 T 12-10-2018 PA257_5736 d63aad8cb8b2d53a5a7f1ca937940c07 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 934 21.206 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 PA257_0157 04eeae8831e8603209e1c2b8716d35a1 432 Pfam PF01979 Amidohydrolase family 67 426 2.6E-64 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_0157 04eeae8831e8603209e1c2b8716d35a1 432 SUPERFAMILY SSF51556 69 372 8.81E-101 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_0157 04eeae8831e8603209e1c2b8716d35a1 432 Gene3D G3DSA:3.20.20.140 70 387 1.1E-183 T 12-10-2018 PA257_0157 04eeae8831e8603209e1c2b8716d35a1 432 Gene3D G3DSA:2.30.40.10 7 423 1.1E-183 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_0157 04eeae8831e8603209e1c2b8716d35a1 432 SUPERFAMILY SSF51338 23 85 1.48E-6 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_0157 04eeae8831e8603209e1c2b8716d35a1 432 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 26 425 1.2E-181 T 12-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 SMART SM00100 25 146 1.4E-19 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 Pfam PF00325 Bacterial regulatory proteins, crp family 188 219 9.8E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 SUPERFAMILY SSF51206 18 157 4.32E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 204 219 9.9E-12 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 188 204 9.9E-12 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 ProSitePatterns PS00042 Crp-type HTH domain signature. 190 213 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 SUPERFAMILY SSF46785 161 239 3.11E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 Gene3D G3DSA:2.60.120.10 38 159 5.0E-46 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 Pfam PF00027 Cyclic nucleotide-binding domain 45 129 4.6E-16 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 SMART SM00419 182 230 3.6E-16 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_4244 cbf5001cdb797fd5836264fd1665a83d 244 Gene3D G3DSA:1.10.10.10 160 241 1.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6167 40f6ab3e7c30577b01f96d1c14361988 366 SUPERFAMILY SSF54292 265 365 3.41E-18 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_6167 40f6ab3e7c30577b01f96d1c14361988 366 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 318 326 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PA257_6167 40f6ab3e7c30577b01f96d1c14361988 366 Gene3D G3DSA:3.10.20.30 277 366 6.0E-13 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_6167 40f6ab3e7c30577b01f96d1c14361988 366 Pfam PF00175 Oxidoreductase NAD-binding domain 151 254 3.1E-9 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_6167 40f6ab3e7c30577b01f96d1c14361988 366 Gene3D G3DSA:3.40.50.80 144 276 2.3E-19 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_6167 40f6ab3e7c30577b01f96d1c14361988 366 SUPERFAMILY SSF63380 40 142 4.48E-19 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_6167 40f6ab3e7c30577b01f96d1c14361988 366 Gene3D G3DSA:2.40.30.10 40 138 3.6E-17 T 12-10-2018 PA257_6167 40f6ab3e7c30577b01f96d1c14361988 366 Pfam PF00970 Oxidoreductase FAD-binding domain 75 141 1.1E-5 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PA257_6167 40f6ab3e7c30577b01f96d1c14361988 366 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 291 339 1.1E-4 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_6167 40f6ab3e7c30577b01f96d1c14361988 366 SUPERFAMILY SSF52343 146 270 7.86E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_5957 23a808f4866f3157aa9d441fbe70f08d 304 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 242 5.3E-20 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 PA257_5957 23a808f4866f3157aa9d441fbe70f08d 304 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 5.3E-57 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 PA257_5957 23a808f4866f3157aa9d441fbe70f08d 304 SUPERFAMILY SSF88697 245 303 5.47E-14 T 12-10-2018 IPR015947 PUA-like superfamily PA257_5957 23a808f4866f3157aa9d441fbe70f08d 304 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 302 19.36 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5957 23a808f4866f3157aa9d441fbe70f08d 304 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 246 302 2.4E-20 T 12-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5957 23a808f4866f3157aa9d441fbe70f08d 304 Gene3D G3DSA:2.30.130.10 244 304 1.5E-26 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 PA257_5957 23a808f4866f3157aa9d441fbe70f08d 304 SUPERFAMILY SSF55120 11 241 2.01E-84 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5957 23a808f4866f3157aa9d441fbe70f08d 304 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 2.8E-80 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5957 23a808f4866f3157aa9d441fbe70f08d 304 Gene3D G3DSA:3.30.2350.10 1 241 1.6E-93 T 12-10-2018 PA257_2579 a4c66176277bc637422e7acf37d4d46e 471 Gene3D G3DSA:3.30.420.10 84 299 4.8E-31 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_2579 a4c66176277bc637422e7acf37d4d46e 471 Pfam PF09299 Mu transposase, C-terminal 304 366 1.8E-12 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal PA257_2579 a4c66176277bc637422e7acf37d4d46e 471 Pfam PF00665 Integrase core domain 85 223 2.4E-24 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_2579 a4c66176277bc637422e7acf37d4d46e 471 SUPERFAMILY SSF53098 82 279 1.97E-20 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_5267 949f5ca554df753d1690952945023de7 268 Pfam PF14335 Domain of unknown function (DUF4391) 13 259 6.8E-82 T 12-10-2018 IPR025503 Protein of unknown function DUF4391 PA257_0706 0177f42c8772bda414a74df806b64f50 303 Gene3D G3DSA:2.60.120.10 21 91 3.1E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_0706 0177f42c8772bda414a74df806b64f50 303 SUPERFAMILY SSF46689 196 245 9.43E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0706 0177f42c8772bda414a74df806b64f50 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_0706 0177f42c8772bda414a74df806b64f50 303 SMART SM00342 213 296 5.6E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0706 0177f42c8772bda414a74df806b64f50 303 Gene3D G3DSA:1.10.10.60 195 301 3.2E-28 T 12-10-2018 PA257_0706 0177f42c8772bda414a74df806b64f50 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 6.2E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_0706 0177f42c8772bda414a74df806b64f50 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 6.2E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_0706 0177f42c8772bda414a74df806b64f50 303 SUPERFAMILY SSF51182 27 81 9.49E-8 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_0706 0177f42c8772bda414a74df806b64f50 303 Pfam PF12833 Helix-turn-helix domain 219 298 1.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0706 0177f42c8772bda414a74df806b64f50 303 Pfam PF02311 AraC-like ligand binding domain 17 173 3.7E-37 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_0706 0177f42c8772bda414a74df806b64f50 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_0706 0177f42c8772bda414a74df806b64f50 303 SUPERFAMILY SSF46689 249 298 7.62E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0684 c0047c0cea17c48d9458016f4fc2ff0b 152 Gene3D G3DSA:1.20.120.10 22 151 3.1E-29 T 12-10-2018 PA257_0684 c0047c0cea17c48d9458016f4fc2ff0b 152 Pfam PF01322 Cytochrome C' 30 150 1.0E-31 T 12-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 PA257_0684 c0047c0cea17c48d9458016f4fc2ff0b 152 PIRSF PIRSF000027 7 152 8.3E-47 T 12-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 PA257_0684 c0047c0cea17c48d9458016f4fc2ff0b 152 SUPERFAMILY SSF47175 23 150 5.89E-33 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 PA257_6376 60615b32844cb287810c71874eaae19f 416 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 3 408 54.299 T 12-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 PA257_6376 60615b32844cb287810c71874eaae19f 416 Gene3D G3DSA:3.30.9.10 137 356 1.0E-41 T 12-10-2018 PA257_6376 60615b32844cb287810c71874eaae19f 416 Pfam PF01266 FAD dependent oxidoreductase 4 394 6.5E-65 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_6376 60615b32844cb287810c71874eaae19f 416 Gene3D G3DSA:3.50.50.60 5 56 2.1E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6376 60615b32844cb287810c71874eaae19f 416 SUPERFAMILY SSF54373 267 357 1.31E-13 T 12-10-2018 PA257_6376 60615b32844cb287810c71874eaae19f 416 Gene3D G3DSA:3.50.50.60 104 396 1.0E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6376 60615b32844cb287810c71874eaae19f 416 SUPERFAMILY SSF51905 4 406 1.94E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0547 9966d92128808da5636df5486b2805ad 291 Pfam PF01739 CheR methyltransferase, SAM binding domain 86 272 3.1E-59 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PA257_0547 9966d92128808da5636df5486b2805ad 291 Gene3D G3DSA:1.10.155.10 8 84 2.6E-12 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily PA257_0547 9966d92128808da5636df5486b2805ad 291 Pfam PF03705 CheR methyltransferase, all-alpha domain 18 70 5.3E-10 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PA257_0547 9966d92128808da5636df5486b2805ad 291 SUPERFAMILY SSF47757 7 85 2.88E-15 T 12-10-2018 PA257_0547 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 39 52 2.3E-36 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0547 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 2.3E-36 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0547 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 79 91 2.3E-36 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0547 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 223 237 2.3E-36 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0547 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 154 170 2.3E-36 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0547 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 242 265 2.3E-36 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0547 9966d92128808da5636df5486b2805ad 291 SMART SM00138 17 283 4.9E-129 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0547 9966d92128808da5636df5486b2805ad 291 Gene3D G3DSA:3.40.50.150 85 285 5.8E-49 T 12-10-2018 PA257_0547 9966d92128808da5636df5486b2805ad 291 SUPERFAMILY SSF53335 87 275 5.63E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 SUPERFAMILY SSF56645 20 261 1.05E-82 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 Gene3D G3DSA:1.10.540.10 20 140 1.8E-42 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 142 237 1.6E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 SUPERFAMILY SSF47203 249 397 3.54E-44 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 Gene3D G3DSA:2.40.110.10 141 253 4.7E-43 T 12-10-2018 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 144 156 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 356 375 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 249 395 6.8E-43 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 Gene3D G3DSA:1.20.140.10 254 397 1.6E-41 T 12-10-2018 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 PIRSF PIRSF016578 13 102 4.7 T 12-10-2018 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 PIRSF PIRSF016578 145 382 4.0E-11 T 12-10-2018 PA257_2421 bebb3b8b18c65227e5cea8e8efaf2b3d 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 24 138 6.3E-33 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_4790 beeb9bc5895b2036e5764ec69a7d1707 847 Gene3D G3DSA:3.60.20.10 265 820 1.4E-147 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_4790 beeb9bc5895b2036e5764ec69a7d1707 847 SUPERFAMILY SSF56235 52 840 1.18E-206 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_4790 beeb9bc5895b2036e5764ec69a7d1707 847 Gene3D G3DSA:2.30.120.10 337 418 1.4E-147 T 12-10-2018 PA257_4790 beeb9bc5895b2036e5764ec69a7d1707 847 Gene3D G3DSA:1.10.439.10 31 188 5.1E-44 T 12-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 PA257_4790 beeb9bc5895b2036e5764ec69a7d1707 847 Pfam PF01804 Penicillin amidase 56 833 1.9E-196 T 12-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 PA257_4790 beeb9bc5895b2036e5764ec69a7d1707 847 PIRSF PIRSF001227 17 842 3.8E-164 T 12-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 PA257_4790 beeb9bc5895b2036e5764ec69a7d1707 847 Gene3D G3DSA:1.10.1400.10 566 718 1.4E-147 T 12-10-2018 PA257_3836 1323e729e99525f942f05d77e0508ac1 804 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 787 804 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_3836 1323e729e99525f942f05d77e0508ac1 804 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 164 804 4.0E-111 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_3836 1323e729e99525f942f05d77e0508ac1 804 Gene3D G3DSA:3.55.50.30 43 115 1.1E-24 T 12-10-2018 PA257_3836 1323e729e99525f942f05d77e0508ac1 804 Pfam PF00593 TonB dependent receptor 383 801 2.4E-41 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_3836 1323e729e99525f942f05d77e0508ac1 804 Gene3D G3DSA:2.40.170.20 276 804 7.6E-81 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_3836 1323e729e99525f942f05d77e0508ac1 804 SUPERFAMILY SSF56935 157 804 4.64E-110 T 12-10-2018 PA257_3836 1323e729e99525f942f05d77e0508ac1 804 Gene3D G3DSA:2.170.130.10 155 275 1.4E-21 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_3836 1323e729e99525f942f05d77e0508ac1 804 SMART SM00965 65 116 2.8E-14 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_3836 1323e729e99525f942f05d77e0508ac1 804 Pfam PF07660 Secretin and TonB N terminus short domain 65 115 3.4E-7 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_3836 1323e729e99525f942f05d77e0508ac1 804 Pfam PF07715 TonB-dependent Receptor Plug Domain 162 260 1.9E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_3344 6665d5e885674ab10eaee5752476e78c 483 ProSitePatterns PS01095 Chitinases family 18 active site. 135 143 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 PA257_3344 6665d5e885674ab10eaee5752476e78c 483 Gene3D G3DSA:2.60.40.10 341 427 6.5E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3344 6665d5e885674ab10eaee5752476e78c 483 SUPERFAMILY SSF51445 25 321 7.0E-47 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_3344 6665d5e885674ab10eaee5752476e78c 483 SUPERFAMILY SSF49265 342 427 4.43E-11 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 PA257_3344 6665d5e885674ab10eaee5752476e78c 483 SUPERFAMILY SSF51055 438 481 5.1E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PA257_3344 6665d5e885674ab10eaee5752476e78c 483 Gene3D G3DSA:3.20.20.80 6 334 3.1E-85 T 12-10-2018 PA257_3344 6665d5e885674ab10eaee5752476e78c 483 Pfam PF00704 Glycosyl hydrolases family 18 29 311 2.7E-27 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 PA257_3344 6665d5e885674ab10eaee5752476e78c 483 SMART SM00060 343 417 3.6E-6 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 PA257_3344 6665d5e885674ab10eaee5752476e78c 483 Gene3D G3DSA:2.10.10.20 438 480 6.0E-16 T 12-10-2018 PA257_3344 6665d5e885674ab10eaee5752476e78c 483 SMART SM00495 436 482 2.7E-4 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PA257_4487 14c1faec86f375b2b46aff018cbad2af 371 Pfam PF00266 Aminotransferase class-V 37 304 3.5E-19 T 12-10-2018 IPR000192 Aminotransferase class V domain PA257_4487 14c1faec86f375b2b46aff018cbad2af 371 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 5 364 6.1E-184 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PA257_4487 14c1faec86f375b2b46aff018cbad2af 371 PIRSF PIRSF000524 1 370 1.9E-61 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 PA257_4487 14c1faec86f375b2b46aff018cbad2af 371 Gene3D G3DSA:3.90.1150.10 11 354 2.1E-111 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_4487 14c1faec86f375b2b46aff018cbad2af 371 Gene3D G3DSA:3.40.640.10 19 263 2.1E-111 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_4487 14c1faec86f375b2b46aff018cbad2af 371 SUPERFAMILY SSF53383 8 367 1.9E-83 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_4487 14c1faec86f375b2b46aff018cbad2af 371 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 371 207.681 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PA257_4487 14c1faec86f375b2b46aff018cbad2af 371 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 9 362 3.0E-167 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PA257_2862 94c9df8836eb7ca02306287aa8268236 746 Pfam PF00593 TonB dependent receptor 282 744 8.2E-57 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_2862 94c9df8836eb7ca02306287aa8268236 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 168 2.5E-27 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_2862 94c9df8836eb7ca02306287aa8268236 746 SUPERFAMILY SSF56935 39 746 5.19E-133 T 12-10-2018 PA257_2862 94c9df8836eb7ca02306287aa8268236 746 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 746 3.1E-102 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_2862 94c9df8836eb7ca02306287aa8268236 746 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 729 746 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_2862 94c9df8836eb7ca02306287aa8268236 746 Gene3D G3DSA:2.40.170.20 179 746 2.0E-220 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_2862 94c9df8836eb7ca02306287aa8268236 746 Gene3D G3DSA:2.170.130.10 35 173 4.7E-43 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_5520 aa9037045a395ff1f8132f3d9898f15a 102 Pfam PF13466 STAS domain 14 94 2.2E-16 T 12-10-2018 IPR002645 STAS domain PA257_5520 aa9037045a395ff1f8132f3d9898f15a 102 SUPERFAMILY SSF52091 7 100 1.9E-16 T 12-10-2018 IPR036513 STAS domain superfamily PA257_5520 aa9037045a395ff1f8132f3d9898f15a 102 Gene3D G3DSA:3.30.750.24 6 102 1.0E-15 T 12-10-2018 IPR036513 STAS domain superfamily PA257_5743 22408758d4a7dc69c3799fc8677dd1fa 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.6E-37 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5743 22408758d4a7dc69c3799fc8677dd1fa 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.6E-37 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5743 22408758d4a7dc69c3799fc8677dd1fa 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.6E-37 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5743 22408758d4a7dc69c3799fc8677dd1fa 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5743 22408758d4a7dc69c3799fc8677dd1fa 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5743 22408758d4a7dc69c3799fc8677dd1fa 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 6.0E-17 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5743 22408758d4a7dc69c3799fc8677dd1fa 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.9E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5743 22408758d4a7dc69c3799fc8677dd1fa 85 SUPERFAMILY SSF110324 2 80 2.13E-33 T 12-10-2018 PA257_5743 22408758d4a7dc69c3799fc8677dd1fa 85 Gene3D G3DSA:2.40.50.100 21 85 2.6E-29 T 12-10-2018 PA257_5743 22408758d4a7dc69c3799fc8677dd1fa 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.179 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 SUPERFAMILY SSF50156 385 472 5.39E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 SUPERFAMILY SSF50156 252 358 4.05E-23 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 Gene3D G3DSA:2.40.10.120 27 263 1.1E-86 T 12-10-2018 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 SUPERFAMILY SSF50494 6 279 4.84E-70 T 12-10-2018 IPR009003 Peptidase S1, PA clan PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 PRINTS PR00834 HtrA/DegQ protease family signature 128 148 3.6E-53 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 3.6E-53 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 PRINTS PR00834 HtrA/DegQ protease family signature 310 322 3.6E-53 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 PRINTS PR00834 HtrA/DegQ protease family signature 107 119 3.6E-53 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 PRINTS PR00834 HtrA/DegQ protease family signature 168 192 3.6E-53 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 PRINTS PR00834 HtrA/DegQ protease family signature 202 219 3.6E-53 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 Pfam PF13180 PDZ domain 385 466 1.2E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 Pfam PF13180 PDZ domain 271 360 3.5E-18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 SMART SM00228 270 352 3.9E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 SMART SM00228 384 463 8.0E-11 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 Gene3D G3DSA:2.30.42.60 379 474 6.0E-17 T 12-10-2018 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 28 470 4.0E-162 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 Pfam PF13365 Trypsin-like peptidase domain 98 231 9.3E-36 T 12-10-2018 PA257_5143 674ebf0d160589784aeedd1f2639b09f 474 Gene3D G3DSA:2.30.42.10 265 373 2.0E-28 T 12-10-2018 PA257_6588 400e299e44c76acff019b9ed04e998f9 449 SUPERFAMILY SSF103473 10 439 5.36E-86 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6588 400e299e44c76acff019b9ed04e998f9 449 PIRSF PIRSF002808 5 448 1.7E-173 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 PA257_6588 400e299e44c76acff019b9ed04e998f9 449 Pfam PF07690 Major Facilitator Superfamily 34 400 5.0E-53 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6588 400e299e44c76acff019b9ed04e998f9 449 Gene3D G3DSA:1.20.1250.20 240 442 4.2E-59 T 12-10-2018 PA257_6588 400e299e44c76acff019b9ed04e998f9 449 Gene3D G3DSA:1.20.1250.20 18 226 3.0E-60 T 12-10-2018 PA257_6588 400e299e44c76acff019b9ed04e998f9 449 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 PA257_6588 400e299e44c76acff019b9ed04e998f9 449 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 435 1.9E-239 T 12-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 PA257_6588 400e299e44c76acff019b9ed04e998f9 449 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 9.8E-154 T 12-10-2018 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 SMART SM00400 36 90 1.8E-34 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 SUPERFAMILY SSF57783 4 101 1.7E-37 T 12-10-2018 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Pfam PF08278 DNA primase DnaG DnaB-binding 529 652 3.4E-23 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 SUPERFAMILY SSF56731 117 427 7.19E-110 T 12-10-2018 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Pfam PF10410 DnaB-helicase binding domain of primase 374 426 1.3E-8 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Gene3D G3DSA:3.90.580.10 1 102 1.7E-40 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Gene3D G3DSA:3.90.980.10 112 243 1.0E-46 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Pfam PF13662 Toprim domain 262 331 1.6E-17 T 12-10-2018 IPR006171 TOPRIM domain PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 TIGRFAM TIGR01391 dnaG: DNA primase 5 421 5.0E-147 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 SMART SM00493 262 333 2.8E-21 T 12-10-2018 IPR006171 TOPRIM domain PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Gene3D G3DSA:1.20.50.20 372 429 2.9E-19 T 12-10-2018 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 SMART SM00766 526 654 9.3E-34 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 255 5.4E-43 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 SUPERFAMILY SSF117023 525 654 7.85E-27 T 12-10-2018 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Pfam PF01807 CHC2 zinc finger 6 101 9.9E-42 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Hamap MF_00974 DNA primase [dnaG]. 4 655 30.071 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Gene3D G3DSA:3.40.1360.10 244 371 1.5E-44 T 12-10-2018 PA257_0725 24c7b1421c0592ee7c2dc3e8817160b6 664 Gene3D G3DSA:1.10.860.10 517 658 2.4E-21 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PA257_1096 f7a174ab07aa9fcbc5a68ec61630eb3b 365 Gene3D G3DSA:3.90.870.10 1 206 8.4E-90 T 12-10-2018 PA257_1096 f7a174ab07aa9fcbc5a68ec61630eb3b 365 SUPERFAMILY SSF142695 204 363 5.1E-40 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PA257_1096 f7a174ab07aa9fcbc5a68ec61630eb3b 365 PIRSF PIRSF001259 1 365 6.6E-116 T 12-10-2018 PA257_1096 f7a174ab07aa9fcbc5a68ec61630eb3b 365 Pfam PF00925 GTP cyclohydrolase II 208 363 7.7E-30 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PA257_1096 f7a174ab07aa9fcbc5a68ec61630eb3b 365 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.704 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_1096 f7a174ab07aa9fcbc5a68ec61630eb3b 365 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 1.4E-74 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_1096 f7a174ab07aa9fcbc5a68ec61630eb3b 365 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 5.3E-84 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_1096 f7a174ab07aa9fcbc5a68ec61630eb3b 365 SUPERFAMILY SSF55821 2 202 2.27E-86 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 PIRSF PIRSF000497 1 394 1.6E-167 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 4.0E-42 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 SUPERFAMILY SSF55973 234 395 3.26E-67 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 Gene3D G3DSA:3.30.300.10 103 386 2.3E-169 T 12-10-2018 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 101 4.3E-40 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 Gene3D G3DSA:3.30.300.10 6 234 2.3E-169 T 12-10-2018 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 367 1.5E-66 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 394 55.903 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 SUPERFAMILY SSF55973 112 233 8.24E-50 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 SUPERFAMILY SSF55973 6 110 2.2E-44 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 Gene3D G3DSA:3.30.300.10 12 271 2.3E-169 T 12-10-2018 PA257_0689 f9ad60a0e793620ac0e996a9eab5860a 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 392 9.0E-182 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 SUPERFAMILY SSF81901 196 259 1.31E-11 T 12-10-2018 PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 Pfam PF08238 Sel1 repeat 129 164 1.8E-7 T 12-10-2018 IPR006597 Sel1-like repeat PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 Pfam PF08238 Sel1 repeat 200 216 0.02 T 12-10-2018 IPR006597 Sel1-like repeat PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 Pfam PF08238 Sel1 repeat 94 128 9.1E-10 T 12-10-2018 IPR006597 Sel1-like repeat PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 Pfam PF08238 Sel1 repeat 67 91 1.1 T 12-10-2018 IPR006597 Sel1-like repeat PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 Pfam PF08238 Sel1 repeat 217 251 2.2E-4 T 12-10-2018 IPR006597 Sel1-like repeat PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 SMART SM00671 165 216 91.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 SMART SM00671 93 128 2.9E-10 T 12-10-2018 IPR006597 Sel1-like repeat PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 SMART SM00671 61 92 17.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 SMART SM00671 217 252 2.8E-4 T 12-10-2018 IPR006597 Sel1-like repeat PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 SMART SM00671 129 164 1.7E-7 T 12-10-2018 IPR006597 Sel1-like repeat PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 SUPERFAMILY SSF81901 52 177 1.44E-30 T 12-10-2018 PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 Gene3D G3DSA:1.25.40.10 14 197 3.7E-39 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_0434 1bf8ed5647b99b2ff19b27cb6aafaec6 328 Gene3D G3DSA:1.25.40.10 198 282 9.7E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1127 ed90c6d450404cebc44945fa5a416088 273 Gene3D G3DSA:1.10.30.40 10 57 2.2E-7 T 12-10-2018 PA257_1127 ed90c6d450404cebc44945fa5a416088 273 PIRSF PIRSF018982 1 261 4.4E-107 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 PA257_1127 ed90c6d450404cebc44945fa5a416088 273 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 13 250 1.5E-94 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 PA257_1127 ed90c6d450404cebc44945fa5a416088 273 Gene3D G3DSA:3.40.50.11240 68 249 1.3E-66 T 12-10-2018 PA257_1127 ed90c6d450404cebc44945fa5a416088 273 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 5 250 40.18 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 PA257_3640 b202541d6f82a815604a383c3780c8a5 426 SUPERFAMILY SSF103473 32 414 4.45E-52 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3640 b202541d6f82a815604a383c3780c8a5 426 Gene3D G3DSA:1.20.1250.20 227 413 1.2E-17 T 12-10-2018 PA257_3640 b202541d6f82a815604a383c3780c8a5 426 Gene3D G3DSA:1.20.1250.20 21 213 4.2E-23 T 12-10-2018 PA257_3640 b202541d6f82a815604a383c3780c8a5 426 Pfam PF07690 Major Facilitator Superfamily 42 374 1.1E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0046 28e798fab1488045615d6e039570f443 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 7 396 52.811 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PA257_0046 28e798fab1488045615d6e039570f443 402 PIRSF PIRSF001413 4 402 6.5E-163 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PA257_0046 28e798fab1488045615d6e039570f443 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 12 395 5.0E-196 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PA257_0046 28e798fab1488045615d6e039570f443 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 383 3.0E-46 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_0046 28e798fab1488045615d6e039570f443 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 86 100 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PA257_0046 28e798fab1488045615d6e039570f443 402 Gene3D G3DSA:3.40.50.1100 59 389 8.3E-190 T 12-10-2018 PA257_0046 28e798fab1488045615d6e039570f443 402 Gene3D G3DSA:3.40.50.1100 15 211 8.3E-190 T 12-10-2018 PA257_0046 28e798fab1488045615d6e039570f443 402 SUPERFAMILY SSF53686 8 394 1.7E-151 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_4868 837454363ec04cbb9713d3f1c6e376c8 231 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 9 229 45.879 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 PA257_4868 837454363ec04cbb9713d3f1c6e376c8 231 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 210 4.3E-44 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel PA257_4868 837454363ec04cbb9713d3f1c6e376c8 231 TIGRFAM TIGR02796 tolQ: protein TolQ 10 224 5.0E-91 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 PA257_5166 074cd33b68bf7ade379511db8f2e0145 367 Gene3D G3DSA:3.90.226.10 1 367 1.6E-120 T 12-10-2018 PA257_5166 074cd33b68bf7ade379511db8f2e0145 367 Pfam PF16113 Enoyl-CoA hydratase/isomerase 16 354 1.4E-110 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 PA257_5166 074cd33b68bf7ade379511db8f2e0145 367 SUPERFAMILY SSF52096 15 340 9.29E-59 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_5444 11f0a0eeeff2d6662967efbb317f4dcc 227 SUPERFAMILY SSF53335 11 224 1.31E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5444 11f0a0eeeff2d6662967efbb317f4dcc 227 Gene3D G3DSA:3.40.50.150 14 221 1.5E-23 T 12-10-2018 PA257_5444 11f0a0eeeff2d6662967efbb317f4dcc 227 Pfam PF13649 Methyltransferase domain 56 151 2.3E-13 T 12-10-2018 PA257_6389 b7505fe1dd73fb138552700e85dd99d2 509 Gene3D G3DSA:1.10.275.10 2 196 4.6E-69 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal PA257_6389 b7505fe1dd73fb138552700e85dd99d2 509 Gene3D G3DSA:1.20.200.10 197 508 8.5E-127 T 12-10-2018 PA257_6389 b7505fe1dd73fb138552700e85dd99d2 509 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 507 9.0E-220 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6389 b7505fe1dd73fb138552700e85dd99d2 509 Pfam PF00221 Aromatic amino acid lyase 10 469 7.9E-185 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 PA257_6389 b7505fe1dd73fb138552700e85dd99d2 509 SUPERFAMILY SSF48557 3 505 3.77E-191 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 PA257_6389 b7505fe1dd73fb138552700e85dd99d2 509 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 PA257_6389 b7505fe1dd73fb138552700e85dd99d2 509 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 503 44.899 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_2560 4fc8f856dd1dcacda4c43ff0d760cf47 409 SUPERFAMILY SSF53901 8 275 1.3E-47 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2560 4fc8f856dd1dcacda4c43ff0d760cf47 409 Gene3D G3DSA:3.40.47.10 2 400 8.3E-85 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2560 4fc8f856dd1dcacda4c43ff0d760cf47 409 SUPERFAMILY SSF53901 279 399 1.18E-22 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2560 4fc8f856dd1dcacda4c43ff0d760cf47 409 ProSitePatterns PS00737 Thiolases signature 2. 366 382 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PA257_2560 4fc8f856dd1dcacda4c43ff0d760cf47 409 Pfam PF00108 Thiolase, N-terminal domain 8 269 1.7E-39 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_2560 4fc8f856dd1dcacda4c43ff0d760cf47 409 Pfam PF02803 Thiolase, C-terminal domain 279 393 4.8E-24 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_2560 4fc8f856dd1dcacda4c43ff0d760cf47 409 PIRSF PIRSF000429 2 401 2.6E-77 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_2560 4fc8f856dd1dcacda4c43ff0d760cf47 409 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 393 1.3E-84 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_4228 d34c1b7ae544d66d6be16d0adfd17204 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 444 8.5E-113 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4228 d34c1b7ae544d66d6be16d0adfd17204 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 472 1.3E-233 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PA257_4228 d34c1b7ae544d66d6be16d0adfd17204 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4228 d34c1b7ae544d66d6be16d0adfd17204 475 SUPERFAMILY SSF81442 9 468 3.27E-125 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4228 d34c1b7ae544d66d6be16d0adfd17204 475 Gene3D G3DSA:1.20.210.10 2 475 3.3E-217 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_2106 eb4aaa960397cf4ef27582c3eb7f9a31 242 SUPERFAMILY SSF46894 136 233 5.39E-22 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_2106 eb4aaa960397cf4ef27582c3eb7f9a31 242 SMART SM00862 156 232 1.3E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_2106 eb4aaa960397cf4ef27582c3eb7f9a31 242 SMART SM00448 6 119 1.5E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2106 eb4aaa960397cf4ef27582c3eb7f9a31 242 SUPERFAMILY SSF52172 4 129 1.99E-42 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2106 eb4aaa960397cf4ef27582c3eb7f9a31 242 Gene3D G3DSA:3.40.50.2300 2 132 1.6E-38 T 12-10-2018 PA257_2106 eb4aaa960397cf4ef27582c3eb7f9a31 242 Gene3D G3DSA:1.10.10.10 133 237 4.1E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2106 eb4aaa960397cf4ef27582c3eb7f9a31 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_2106 eb4aaa960397cf4ef27582c3eb7f9a31 242 Pfam PF00072 Response regulator receiver domain 8 120 5.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5078 b555b2405459c99b412d4eb5399b03fc 375 Pfam PF12167 Arm DNA-binding domain 1 48 5.8E-16 T 12-10-2018 IPR022000 Min27-like integrase, DNA-binding domain PA257_5078 b555b2405459c99b412d4eb5399b03fc 375 Pfam PF00589 Phage integrase family 171 339 1.4E-17 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_5078 b555b2405459c99b412d4eb5399b03fc 375 Gene3D G3DSA:1.10.150.130 57 161 4.2E-22 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_5078 b555b2405459c99b412d4eb5399b03fc 375 Gene3D G3DSA:1.10.443.10 162 357 2.3E-36 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_5078 b555b2405459c99b412d4eb5399b03fc 375 SUPERFAMILY SSF56349 62 346 6.18E-54 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_5078 b555b2405459c99b412d4eb5399b03fc 375 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 63 118 1.8E-7 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PA257_0180 1291b216f81d1cf5a8236bfd25e422ab 201 Gene3D G3DSA:2.60.130.10 2 201 2.7E-77 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PA257_0180 1291b216f81d1cf5a8236bfd25e422ab 201 Pfam PF00775 Dioxygenase 41 191 2.0E-12 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PA257_0180 1291b216f81d1cf5a8236bfd25e422ab 201 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 9 201 6.7E-75 T 12-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 PA257_0180 1291b216f81d1cf5a8236bfd25e422ab 201 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 52 80 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PA257_0180 1291b216f81d1cf5a8236bfd25e422ab 201 SUPERFAMILY SSF49482 5 201 1.57E-57 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 SUPERFAMILY SSF47384 125 193 5.3E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 354 2.3E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 SMART SM00388 131 196 3.2E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 352 1.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 1.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 301 1.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 Gene3D G3DSA:3.30.450.20 3 114 1.3E-20 T 12-10-2018 PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 SUPERFAMILY SSF55785 6 104 1.54E-8 T 12-10-2018 IPR035965 PAS domain superfamily PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 Gene3D G3DSA:3.30.565.10 195 354 5.2E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 SMART SM00387 235 355 2.7E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 SUPERFAMILY SSF55874 198 353 9.56E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 188 1.3E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 Gene3D G3DSA:1.10.287.130 135 192 1.8E-14 T 12-10-2018 PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 Pfam PF00989 PAS fold 8 104 5.4E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 PA257_6416 3ab154335bc98ffbbadcad691cdd99a3 358 SMART SM00091 5 73 9.8E-5 T 12-10-2018 IPR000014 PAS domain PA257_0679 4a56bb7bc5ef18dc4a22cad80f6dddc1 341 Pfam PF04536 TPM domain 31 154 4.4E-41 T 12-10-2018 IPR007621 TPM domain PA257_0679 4a56bb7bc5ef18dc4a22cad80f6dddc1 341 Gene3D G3DSA:3.10.310.50 19 161 2.2E-51 T 12-10-2018 PA257_6221 5e15e6452f5e49ce7cbc0075b9419a3d 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PA257_6221 5e15e6452f5e49ce7cbc0075b9419a3d 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 7.2E-184 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PA257_6221 5e15e6452f5e49ce7cbc0075b9419a3d 430 Gene3D G3DSA:1.10.300.10 102 201 3.1E-103 T 12-10-2018 PA257_6221 5e15e6452f5e49ce7cbc0075b9419a3d 430 Pfam PF00709 Adenylosuccinate synthetase 5 423 8.8E-179 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PA257_6221 5e15e6452f5e49ce7cbc0075b9419a3d 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 218.278 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PA257_6221 5e15e6452f5e49ce7cbc0075b9419a3d 430 SUPERFAMILY SSF52540 3 429 1.38E-176 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6221 5e15e6452f5e49ce7cbc0075b9419a3d 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PA257_6221 5e15e6452f5e49ce7cbc0075b9419a3d 430 Gene3D G3DSA:3.90.170.10 267 430 8.1E-67 T 12-10-2018 PA257_6221 5e15e6452f5e49ce7cbc0075b9419a3d 430 SMART SM00788 4 424 4.1E-300 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PA257_6221 5e15e6452f5e49ce7cbc0075b9419a3d 430 Gene3D G3DSA:3.40.440.10 6 249 3.1E-103 T 12-10-2018 PA257_0341 7f74e30d601f9497151c1a41869c573d 252 Pfam PF01435 Peptidase family M48 73 246 2.5E-25 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PA257_0341 7f74e30d601f9497151c1a41869c573d 252 Gene3D G3DSA:3.30.2010.10 61 147 1.9E-8 T 12-10-2018 PA257_3533 52d217b400b8f1e5ea163f88c0138afb 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3533 52d217b400b8f1e5ea163f88c0138afb 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3533 52d217b400b8f1e5ea163f88c0138afb 194 SUPERFAMILY SSF48498 81 192 6.82E-26 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_3533 52d217b400b8f1e5ea163f88c0138afb 194 Gene3D G3DSA:1.10.357.10 1 194 1.8E-84 T 12-10-2018 PA257_3533 52d217b400b8f1e5ea163f88c0138afb 194 Pfam PF16925 Bacterial transcriptional repressor C-terminal 104 187 1.4E-10 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PA257_3533 52d217b400b8f1e5ea163f88c0138afb 194 SUPERFAMILY SSF46689 2 73 1.44E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3533 52d217b400b8f1e5ea163f88c0138afb 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 1.3E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4878 f59df46a28cd0789daad3a53d9e41ddb 142 PIRSF PIRSF000714 1 137 1.5E-49 T 12-10-2018 IPR026026 Histidine triad hydrolase, Hint-type PA257_4878 f59df46a28cd0789daad3a53d9e41ddb 142 Gene3D G3DSA:3.30.428.10 1 138 3.1E-43 T 12-10-2018 IPR036265 HIT-like superfamily PA257_4878 f59df46a28cd0789daad3a53d9e41ddb 142 Pfam PF01230 HIT domain 8 98 2.4E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_4878 f59df46a28cd0789daad3a53d9e41ddb 142 SUPERFAMILY SSF54197 2 132 1.7E-35 T 12-10-2018 IPR036265 HIT-like superfamily PA257_3740 1d2a035d6cd13d55e87f564b6696fe88 232 SMART SM00882 8 219 8.0E-92 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PA257_3740 1d2a035d6cd13d55e87f564b6696fe88 232 SUPERFAMILY SSF100950 5 226 7.85E-89 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_3740 1d2a035d6cd13d55e87f564b6696fe88 232 Pfam PF01144 Coenzyme A transferase 11 218 5.9E-78 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PA257_3740 1d2a035d6cd13d55e87f564b6696fe88 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 PA257_3740 1d2a035d6cd13d55e87f564b6696fe88 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 218 1.0E-76 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 PA257_3740 1d2a035d6cd13d55e87f564b6696fe88 232 Gene3D G3DSA:3.40.1080.10 2 228 2.3E-97 T 12-10-2018 PA257_0207 42f28f2995ec4607716c236075c8aa35 390 Gene3D G3DSA:1.10.287.950 60 341 2.8E-37 T 12-10-2018 PA257_0207 42f28f2995ec4607716c236075c8aa35 390 SMART SM00283 95 344 3.5E-5 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_0207 42f28f2995ec4607716c236075c8aa35 390 SUPERFAMILY SSF58104 88 336 3.79E-37 T 12-10-2018 PA257_0207 42f28f2995ec4607716c236075c8aa35 390 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 169 316 3.9E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_0207 42f28f2995ec4607716c236075c8aa35 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 195 222 1.4E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_0207 42f28f2995ec4607716c236075c8aa35 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 224 253 1.4E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_5929 13ad5bf747e65dab1a42a9f0d32433a8 284 Gene3D G3DSA:3.10.310.10 6 271 2.1E-101 T 12-10-2018 PA257_5929 13ad5bf747e65dab1a42a9f0d32433a8 284 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 276 6.1E-37 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_5929 13ad5bf747e65dab1a42a9f0d32433a8 284 SUPERFAMILY SSF54506 1 280 4.19E-50 T 12-10-2018 PA257_5929 13ad5bf747e65dab1a42a9f0d32433a8 284 Pfam PF02567 Phenazine biosynthesis-like protein 8 271 8.9E-32 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_5929 13ad5bf747e65dab1a42a9f0d32433a8 284 Gene3D G3DSA:3.10.310.10 120 269 2.1E-101 T 12-10-2018 PA257_5929 13ad5bf747e65dab1a42a9f0d32433a8 284 PIRSF PIRSF016184 1 282 2.9E-82 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_1153 ba267f008c8fbfa605c49fcda070e58d 341 Gene3D G3DSA:3.30.70.1070 261 337 3.3E-6 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_1153 ba267f008c8fbfa605c49fcda070e58d 341 Gene3D G3DSA:2.40.40.10 100 193 4.8E-38 T 12-10-2018 IPR036908 RlpA-like domain superfamily PA257_1153 ba267f008c8fbfa605c49fcda070e58d 341 Pfam PF03330 Lytic transglycolase 101 189 5.0E-26 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain PA257_1153 ba267f008c8fbfa605c49fcda070e58d 341 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 102 194 1.2E-43 T 12-10-2018 IPR012997 Rare lipoprotein A PA257_1153 ba267f008c8fbfa605c49fcda070e58d 341 SUPERFAMILY SSF110997 264 336 3.79E-11 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_1153 ba267f008c8fbfa605c49fcda070e58d 341 SUPERFAMILY SSF50685 103 197 3.42E-12 T 12-10-2018 IPR036908 RlpA-like domain superfamily PA257_1153 ba267f008c8fbfa605c49fcda070e58d 341 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 7 192 25.649 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 PA257_1153 ba267f008c8fbfa605c49fcda070e58d 341 Pfam PF05036 Sporulation related domain 264 333 5.5E-11 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 PA257_1235 f9987e87aff1cee087800f2ef2eaac36 641 Pfam PF06980 Protein of unknown function (DUF1302) 31 641 4.7E-230 T 12-10-2018 IPR010727 Protein of unknown function DUF1302 PA257_0920 4d74478fcc12d5af144e1fe3e56f5052 132 Gene3D G3DSA:3.30.1330.40 1 131 2.3E-39 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_0920 4d74478fcc12d5af144e1fe3e56f5052 132 SUPERFAMILY SSF55298 9 130 1.4E-35 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_0920 4d74478fcc12d5af144e1fe3e56f5052 132 Pfam PF01042 Endoribonuclease L-PSP 13 127 2.2E-25 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PA257_4291 4d558b016ad2cd224866f8ff9b846c2d 591 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 590 0.0 T 12-10-2018 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 PA257_4291 4d558b016ad2cd224866f8ff9b846c2d 591 SUPERFAMILY SSF52518 3 184 2.4E-48 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_4291 4d558b016ad2cd224866f8ff9b846c2d 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 2.0E-51 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PA257_4291 4d558b016ad2cd224866f8ff9b846c2d 591 Gene3D G3DSA:3.40.50.970 359 582 2.4E-66 T 12-10-2018 PA257_4291 4d558b016ad2cd224866f8ff9b846c2d 591 Gene3D G3DSA:3.40.50.970 2 171 2.4E-64 T 12-10-2018 PA257_4291 4d558b016ad2cd224866f8ff9b846c2d 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 328 3.1E-35 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PA257_4291 4d558b016ad2cd224866f8ff9b846c2d 591 Gene3D G3DSA:3.40.50.1220 193 358 2.2E-50 T 12-10-2018 PA257_4291 4d558b016ad2cd224866f8ff9b846c2d 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 3.5E-33 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PA257_4291 4d558b016ad2cd224866f8ff9b846c2d 591 SUPERFAMILY SSF52518 369 567 3.5E-51 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_4291 4d558b016ad2cd224866f8ff9b846c2d 591 SUPERFAMILY SSF52467 161 350 4.24E-48 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_0615 905f119326c4275c575ab4f87ed6d741 189 Gene3D G3DSA:1.10.357.10 2 188 1.8E-45 T 12-10-2018 PA257_0615 905f119326c4275c575ab4f87ed6d741 189 SUPERFAMILY SSF48498 79 187 2.91E-18 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_0615 905f119326c4275c575ab4f87ed6d741 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 7.0E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0615 905f119326c4275c575ab4f87ed6d741 189 SUPERFAMILY SSF46689 8 72 1.64E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 SMART SM00388 225 289 3.8E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 6.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 6.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 Gene3D G3DSA:1.10.287.130 176 289 2.4E-18 T 12-10-2018 PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 SUPERFAMILY SSF55874 332 437 1.09E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 Gene3D G3DSA:3.30.565.10 299 440 4.9E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 439 4.6E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 288 7.7E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 SMART SM00387 334 440 2.7E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 SUPERFAMILY SSF47384 208 287 7.26E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_3094 bb5662816838f1e762860a668a2c2dfd 440 Pfam PF08521 Two-component sensor kinase N-terminal 16 147 3.0E-9 T 12-10-2018 IPR013727 Two-component sensor kinase, N-terminal PA257_0890 09b4c664c89e247d6ad7bb58a2a85e5d 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 267 1.6E-24 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_0890 09b4c664c89e247d6ad7bb58a2a85e5d 370 SUPERFAMILY SSF111369 58 272 1.44E-36 T 12-10-2018 PA257_0890 09b4c664c89e247d6ad7bb58a2a85e5d 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 352 3.6E-75 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_0890 09b4c664c89e247d6ad7bb58a2a85e5d 370 Gene3D G3DSA:2.40.50.100 67 195 4.9E-66 T 12-10-2018 PA257_0890 09b4c664c89e247d6ad7bb58a2a85e5d 370 Gene3D G3DSA:2.40.420.20 278 350 4.9E-66 T 12-10-2018 PA257_0890 09b4c664c89e247d6ad7bb58a2a85e5d 370 Gene3D G3DSA:2.40.30.170 58 277 4.9E-66 T 12-10-2018 PA257_0890 09b4c664c89e247d6ad7bb58a2a85e5d 370 Gene3D G3DSA:1.10.287.470 102 161 4.9E-66 T 12-10-2018 PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 319 1.4E-16 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 SUPERFAMILY SSF103039 6 230 1.28E-19 T 12-10-2018 IPR028976 CheC-like superfamily PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 3.4E-21 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 3.4E-21 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 3.4E-21 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 3.4E-21 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 SUPERFAMILY SSF101801 247 322 3.14E-14 T 12-10-2018 IPR036429 SpoA-like superfamily PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 Gene3D G3DSA:3.40.1550.10 44 230 2.6E-57 T 12-10-2018 IPR028976 CheC-like superfamily PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 PIRSF PIRSF002888 3 323 1.3E-91 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 319 2.3E-109 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PA257_4350 cd00c6d6044b70d67ce0592151621b7f 323 Pfam PF02154 Flagellar motor switch protein FliM 38 229 4.3E-75 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PA257_1224 209fc5143968908ccecdfd8c5d0dd5c7 324 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 239 248 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_1224 209fc5143968908ccecdfd8c5d0dd5c7 324 Pfam PF00158 Sigma-54 interaction domain 32 186 5.4E-48 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_1224 209fc5143968908ccecdfd8c5d0dd5c7 324 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 112 127 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_1224 209fc5143968908ccecdfd8c5d0dd5c7 324 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 51 64 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_1224 209fc5143968908ccecdfd8c5d0dd5c7 324 SMART SM00382 47 191 1.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1224 209fc5143968908ccecdfd8c5d0dd5c7 324 SUPERFAMILY SSF52540 28 267 4.94E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1224 209fc5143968908ccecdfd8c5d0dd5c7 324 Gene3D G3DSA:1.10.8.60 198 273 4.5E-21 T 12-10-2018 PA257_1224 209fc5143968908ccecdfd8c5d0dd5c7 324 Gene3D G3DSA:3.40.50.300 15 197 3.6E-51 T 12-10-2018 PA257_1866 4d2e905fce9b81730b4371af360caf63 596 SUPERFAMILY SSF52540 324 557 1.78E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1866 4d2e905fce9b81730b4371af360caf63 596 SMART SM00382 358 543 2.2E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1866 4d2e905fce9b81730b4371af360caf63 596 Pfam PF00005 ABC transporter 349 496 8.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1866 4d2e905fce9b81730b4371af360caf63 596 Pfam PF00664 ABC transporter transmembrane region 28 283 8.8E-14 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PA257_1866 4d2e905fce9b81730b4371af360caf63 596 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1866 4d2e905fce9b81730b4371af360caf63 596 SUPERFAMILY SSF90123 8 324 2.88E-45 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_1866 4d2e905fce9b81730b4371af360caf63 596 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 18 556 4.4E-232 T 12-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PA257_1866 4d2e905fce9b81730b4371af360caf63 596 Gene3D G3DSA:1.20.1560.10 10 317 2.7E-36 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_1866 4d2e905fce9b81730b4371af360caf63 596 Gene3D G3DSA:3.40.50.300 325 563 1.1E-67 T 12-10-2018 PA257_6535 fe30c157ead0170567a83653e93f6ef7 71 Pfam PF02599 Global regulator protein family 4 67 1.7E-10 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 PA257_6535 fe30c157ead0170567a83653e93f6ef7 71 SUPERFAMILY SSF117130 3 67 1.2E-8 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 PA257_6535 fe30c157ead0170567a83653e93f6ef7 71 Gene3D G3DSA:3.30.70.1680 1 71 4.2E-34 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 PA257_0373 9885493340568934013e0e9944e49344 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 37 211 9.0E-39 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_0373 9885493340568934013e0e9944e49344 350 Gene3D G3DSA:1.10.10.60 233 346 6.0E-20 T 12-10-2018 PA257_0373 9885493340568934013e0e9944e49344 350 SMART SM00342 254 335 1.4E-11 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0373 9885493340568934013e0e9944e49344 350 SUPERFAMILY SSF46689 289 338 7.17E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0373 9885493340568934013e0e9944e49344 350 Pfam PF12833 Helix-turn-helix domain 261 337 1.9E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 Gene3D G3DSA:1.10.150.300 113 202 4.5E-150 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 Gene3D G3DSA:3.10.20.30 48 364 4.5E-150 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 SUPERFAMILY SSF81271 282 363 5.01E-38 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 Pfam PF01926 50S ribosome-binding GTPase 5 121 5.0E-22 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 45.261 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 2.1E-41 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 5.2E-162 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 PIRSF PIRSF006641 1 366 1.3E-159 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.2E-32 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.2E-32 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.2E-32 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-32 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 SUPERFAMILY SSF52540 3 304 1.74E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5860 1f09514349a2e4a5af6a81dccb56358b 366 Gene3D G3DSA:3.40.50.300 4 281 4.5E-150 T 12-10-2018 PA257_3739 0b98d5de4aca98813e101f57334311d2 218 SUPERFAMILY SSF100950 4 216 3.27E-74 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_3739 0b98d5de4aca98813e101f57334311d2 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 12-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 PA257_3739 0b98d5de4aca98813e101f57334311d2 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 1.1E-98 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 PA257_3739 0b98d5de4aca98813e101f57334311d2 218 Pfam PF01144 Coenzyme A transferase 6 201 1.8E-41 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PA257_3739 0b98d5de4aca98813e101f57334311d2 218 SMART SM00882 6 202 5.8E-72 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PA257_3739 0b98d5de4aca98813e101f57334311d2 218 Gene3D G3DSA:3.40.1080.10 1 213 3.2E-93 T 12-10-2018 PA257_1871 d7f3b528b33864e17936b3c9ad88d206 323 SUPERFAMILY SSF111369 107 165 5.75E-6 T 12-10-2018 PA257_1871 d7f3b528b33864e17936b3c9ad88d206 323 Gene3D G3DSA:1.10.287.470 72 95 2.4E-11 T 12-10-2018 PA257_1871 d7f3b528b33864e17936b3c9ad88d206 323 SUPERFAMILY SSF111369 174 253 7.32E-10 T 12-10-2018 PA257_1871 d7f3b528b33864e17936b3c9ad88d206 323 Gene3D G3DSA:2.40.30.170 237 316 2.5E-18 T 12-10-2018 PA257_1871 d7f3b528b33864e17936b3c9ad88d206 323 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 285 2.6E-18 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_1871 d7f3b528b33864e17936b3c9ad88d206 323 Gene3D G3DSA:1.10.287.470 105 166 2.4E-11 T 12-10-2018 PA257_1871 d7f3b528b33864e17936b3c9ad88d206 323 Gene3D G3DSA:2.40.50.100 202 236 2.5E-18 T 12-10-2018 PA257_1871 d7f3b528b33864e17936b3c9ad88d206 323 SUPERFAMILY SSF111369 40 94 4.97E-6 T 12-10-2018 PA257_1871 d7f3b528b33864e17936b3c9ad88d206 323 Gene3D G3DSA:1.10.287.470 174 201 2.5E-18 T 12-10-2018 PA257_1871 d7f3b528b33864e17936b3c9ad88d206 323 Gene3D G3DSA:2.40.50.100 38 71 2.4E-11 T 12-10-2018 PA257_3893 fb789341e1354c5dd7fce81c28c78a01 295 SUPERFAMILY SSF53850 90 294 2.17E-43 T 12-10-2018 PA257_3893 fb789341e1354c5dd7fce81c28c78a01 295 SUPERFAMILY SSF46785 4 113 3.53E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3893 fb789341e1354c5dd7fce81c28c78a01 295 Gene3D G3DSA:3.40.190.10 93 290 6.1E-66 T 12-10-2018 PA257_3893 fb789341e1354c5dd7fce81c28c78a01 295 Pfam PF03466 LysR substrate binding domain 89 293 1.6E-45 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3893 fb789341e1354c5dd7fce81c28c78a01 295 Gene3D G3DSA:3.40.190.10 164 264 6.1E-66 T 12-10-2018 PA257_3893 fb789341e1354c5dd7fce81c28c78a01 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3893 fb789341e1354c5dd7fce81c28c78a01 295 Gene3D G3DSA:1.10.10.10 1 87 4.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4008 340b17e97f3cf19ace2704578e132906 532 SUPERFAMILY SSF56935 35 532 8.85E-60 T 12-10-2018 PA257_4008 340b17e97f3cf19ace2704578e132906 532 Gene3D G3DSA:2.40.160.60 31 511 4.8E-69 T 12-10-2018 PA257_4008 340b17e97f3cf19ace2704578e132906 532 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 532 2.1E-150 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PA257_1325 ecba2ddad02039d1820a2e3e94d67e84 116 Pfam PF05932 Tir chaperone protein (CesT) family 9 116 5.0E-25 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 PA257_1325 ecba2ddad02039d1820a2e3e94d67e84 116 SUPERFAMILY SSF69635 5 115 9.42E-40 T 12-10-2018 PA257_1325 ecba2ddad02039d1820a2e3e94d67e84 116 PIRSF PIRSF011271 1 116 7.2E-65 T 12-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PA257_1325 ecba2ddad02039d1820a2e3e94d67e84 116 Gene3D G3DSA:3.30.1460.10 1 116 2.0E-40 T 12-10-2018 PA257_1325 ecba2ddad02039d1820a2e3e94d67e84 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 30 51 3.3E-50 T 12-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PA257_1325 ecba2ddad02039d1820a2e3e94d67e84 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 60 76 3.3E-50 T 12-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PA257_1325 ecba2ddad02039d1820a2e3e94d67e84 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 5 28 3.3E-50 T 12-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PA257_1325 ecba2ddad02039d1820a2e3e94d67e84 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 79 97 3.3E-50 T 12-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PA257_1325 ecba2ddad02039d1820a2e3e94d67e84 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 97 115 3.3E-50 T 12-10-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 SUPERFAMILY SSF48557 10 455 8.48E-106 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.0E-50 T 12-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 1.1E-132 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.2E-18 T 12-10-2018 IPR000362 Fumarate lyase family PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 1.2E-18 T 12-10-2018 IPR000362 Fumarate lyase family PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 1.2E-18 T 12-10-2018 IPR000362 Fumarate lyase family PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.2E-18 T 12-10-2018 IPR000362 Fumarate lyase family PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 Gene3D G3DSA:1.20.200.10 118 447 1.7E-156 T 12-10-2018 PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 Pfam PF00206 Lyase 14 313 6.1E-67 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 Gene3D G3DSA:1.10.275.10 1 117 2.7E-48 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal PA257_2926 8fa2cf32251c7d1f45daae51188afdb6 456 Gene3D G3DSA:1.10.40.30 383 446 1.7E-156 T 12-10-2018 PA257_0151 f48df482eaaaff8ac9096770d1b37901 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 2.6E-17 T 12-10-2018 IPR013987 PhnA protein, N-terminal PA257_0151 f48df482eaaaff8ac9096770d1b37901 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 2.5E-50 T 12-10-2018 IPR004624 PhnA protein PA257_0151 f48df482eaaaff8ac9096770d1b37901 113 Pfam PF03831 PhnA domain 46 113 6.3E-33 T 12-10-2018 IPR013988 PhnA protein, C-terminal PA257_0151 f48df482eaaaff8ac9096770d1b37901 113 Gene3D G3DSA:2.30.30.40 43 113 4.2E-35 T 12-10-2018 PA257_0151 f48df482eaaaff8ac9096770d1b37901 113 Gene3D G3DSA:2.20.25.10 1 42 2.0E-23 T 12-10-2018 PA257_0151 f48df482eaaaff8ac9096770d1b37901 113 SUPERFAMILY SSF82057 41 113 9.16E-29 T 12-10-2018 PA257_0151 f48df482eaaaff8ac9096770d1b37901 113 SUPERFAMILY SSF57783 3 37 2.13E-15 T 12-10-2018 PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 SMART SM00421 763 820 4.8E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 780 796 2.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 766 780 2.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 796 808 2.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 SUPERFAMILY SSF46894 756 826 2.69E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 Gene3D G3DSA:1.10.10.10 757 827 3.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 ProSitePatterns PS00622 LuxR-type HTH domain signature. 780 807 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 Gene3D G3DSA:1.25.40.10 429 756 1.4E-34 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 SUPERFAMILY SSF48452 427 606 1.17E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 SUPERFAMILY SSF52540 23 206 6.38E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1851 8cbcb9ae2a232718d2c69ea6aaec8f67 827 Pfam PF00196 Bacterial regulatory proteins, luxR family 765 819 3.7E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 PRINTS PR00945 Mercuric reductase class II signature 534 553 9.2E-93 T 12-10-2018 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 PRINTS PR00945 Mercuric reductase class II signature 292 307 9.2E-93 T 12-10-2018 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 PRINTS PR00945 Mercuric reductase class II signature 110 128 9.2E-93 T 12-10-2018 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 PRINTS PR00945 Mercuric reductase class II signature 13 23 9.2E-93 T 12-10-2018 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 PRINTS PR00945 Mercuric reductase class II signature 272 289 9.2E-93 T 12-10-2018 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 PRINTS PR00945 Mercuric reductase class II signature 145 164 9.2E-93 T 12-10-2018 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 PRINTS PR00945 Mercuric reductase class II signature 469 489 9.2E-93 T 12-10-2018 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 PRINTS PR00945 Mercuric reductase class II signature 237 254 9.2E-93 T 12-10-2018 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 PIRSF PIRSF000350 1 561 1.1E-263 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 133 143 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 Gene3D G3DSA:3.30.70.100 1 69 1.5E-20 T 12-10-2018 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 Gene3D G3DSA:3.50.50.60 245 361 1.9E-117 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 Pfam PF00403 Heavy-metal-associated domain 5 63 5.8E-10 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 SUPERFAMILY SSF55424 436 559 1.89E-33 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 437 545 8.8E-30 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 Gene3D G3DSA:3.50.50.60 102 419 1.9E-117 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 SUPERFAMILY SSF51905 100 426 5.12E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 418 5.9E-64 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 Gene3D G3DSA:3.30.390.30 436 561 4.8E-47 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 SUPERFAMILY SSF55008 2 70 3.93E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_0314 a78bf2c18f227c61b0d09ff11cd4b1a7 561 TIGRFAM TIGR02053 MerA: mercury(II) reductase 100 561 4.7E-188 T 12-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 PA257_6810 dba61ac9793d38b6d6b842444405ff65 417 SUPERFAMILY SSF53383 7 416 2.45E-181 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6810 dba61ac9793d38b6d6b842444405ff65 417 PIRSF PIRSF000412 1 415 3.1E-167 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_6810 dba61ac9793d38b6d6b842444405ff65 417 Pfam PF00464 Serine hydroxymethyltransferase 10 386 1.8E-180 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_6810 dba61ac9793d38b6d6b842444405ff65 417 Gene3D G3DSA:3.40.640.10 37 289 4.1E-185 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6810 dba61ac9793d38b6d6b842444405ff65 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_6810 dba61ac9793d38b6d6b842444405ff65 417 Gene3D G3DSA:3.90.1150.10 11 394 4.1E-185 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_6810 dba61ac9793d38b6d6b842444405ff65 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.041 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_6475 7163a68fc6cc84dc0037cc0ae3ff91d4 190 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 116 1.7E-39 T 12-10-2018 IPR006531 Gp5 N-terminal PA257_6475 7163a68fc6cc84dc0037cc0ae3ff91d4 190 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 7 188 1.9E-62 T 12-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 PA257_6475 7163a68fc6cc84dc0037cc0ae3ff91d4 190 Gene3D G3DSA:2.40.50.230 1 85 5.7E-32 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_6076 3308cce4b00665ac22581cbda0050a59 465 Gene3D G3DSA:1.20.1740.10 3 451 3.0E-46 T 12-10-2018 PA257_6076 3308cce4b00665ac22581cbda0050a59 465 PIRSF PIRSF006060 1 458 1.8E-71 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_6076 3308cce4b00665ac22581cbda0050a59 465 Pfam PF13520 Amino acid permease 14 434 7.2E-52 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_5546 ebad2c86b09f12c74dda4d53bf6d645c 201 Gene3D G3DSA:3.90.950.10 3 191 1.3E-65 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PA257_5546 ebad2c86b09f12c74dda4d53bf6d645c 201 PIRSF PIRSF006305 1 194 4.4E-49 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 PA257_5546 ebad2c86b09f12c74dda4d53bf6d645c 201 SUPERFAMILY SSF52972 2 187 7.19E-59 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PA257_5546 ebad2c86b09f12c74dda4d53bf6d645c 201 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 186 2.6E-53 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 PA257_5546 ebad2c86b09f12c74dda4d53bf6d645c 201 Pfam PF02545 Maf-like protein 4 187 4.7E-54 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 PA257_5546 ebad2c86b09f12c74dda4d53bf6d645c 201 Hamap MF_00528 Septum formation protein Maf [maf]. 3 192 33.506 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 PA257_2840 f84e8c56e9905ffa9e0fa302236270ee 361 Pfam PF05359 Domain of Unknown Function (DUF748) 139 275 4.8E-13 T 12-10-2018 IPR008023 Protein of unknown function DUF748 PA257_3952 673766745906204531e41a331a0e5d19 536 SUPERFAMILY SSF52540 5 256 2.55E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3952 673766745906204531e41a331a0e5d19 536 SUPERFAMILY SSF52540 275 523 1.78E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3952 673766745906204531e41a331a0e5d19 536 ProSitePatterns PS00211 ABC transporters family signature. 424 438 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3952 673766745906204531e41a331a0e5d19 536 Gene3D G3DSA:3.40.50.300 3 271 2.8E-87 T 12-10-2018 PA257_3952 673766745906204531e41a331a0e5d19 536 Gene3D G3DSA:3.40.50.300 272 536 1.1E-83 T 12-10-2018 PA257_3952 673766745906204531e41a331a0e5d19 536 Pfam PF00005 ABC transporter 26 184 2.7E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3952 673766745906204531e41a331a0e5d19 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 265 3.9E-5 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PA257_3952 673766745906204531e41a331a0e5d19 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 503 528 3.6E-5 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PA257_3952 673766745906204531e41a331a0e5d19 536 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3952 673766745906204531e41a331a0e5d19 536 Pfam PF00005 ABC transporter 302 452 2.3E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3952 673766745906204531e41a331a0e5d19 536 SMART SM00382 310 501 2.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3952 673766745906204531e41a331a0e5d19 536 SMART SM00382 34 234 4.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5001 e064d60a2d6ee4d6af486b66e49a6918 199 PIRSF PIRSF000239 1 198 6.5E-54 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_5001 e064d60a2d6ee4d6af486b66e49a6918 199 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 159 192 1.4E-12 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_5001 e064d60a2d6ee4d6af486b66e49a6918 199 Pfam PF00578 AhpC/TSA family 5 138 9.8E-34 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_5001 e064d60a2d6ee4d6af486b66e49a6918 199 Gene3D G3DSA:3.40.30.10 1 196 8.0E-72 T 12-10-2018 PA257_5001 e064d60a2d6ee4d6af486b66e49a6918 199 SUPERFAMILY SSF52833 3 193 3.43E-64 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_3556 d79193bbc1b0540334b94e9c55bcf0c6 150 PIRSF PIRSF029477 1 150 2.5E-72 T 12-10-2018 IPR016920 Uncharacterised conserved protein UCP029477 PA257_3556 d79193bbc1b0540334b94e9c55bcf0c6 150 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 10 146 2.4E-45 T 12-10-2018 IPR011971 Conserved hypothetical protein CHP02284 PA257_3556 d79193bbc1b0540334b94e9c55bcf0c6 150 SUPERFAMILY SSF47240 8 147 4.06E-8 T 12-10-2018 IPR009078 Ferritin-like superfamily PA257_3556 d79193bbc1b0540334b94e9c55bcf0c6 150 Pfam PF09537 Domain of unknown function (DUF2383) 9 118 9.9E-40 T 12-10-2018 IPR019052 Domain of unknown function DUF2383 PA257_3556 d79193bbc1b0540334b94e9c55bcf0c6 150 Gene3D G3DSA:1.20.1260.10 1 150 2.2E-61 T 12-10-2018 IPR012347 Ferritin-like PA257_4681 0b61fe132055e88b8f056d14806cf81c 303 Gene3D G3DSA:1.10.10.10 8 93 1.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4681 0b61fe132055e88b8f056d14806cf81c 303 SUPERFAMILY SSF53850 95 297 8.87E-43 T 12-10-2018 PA257_4681 0b61fe132055e88b8f056d14806cf81c 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4681 0b61fe132055e88b8f056d14806cf81c 303 Gene3D G3DSA:3.40.190.290 96 297 2.4E-57 T 12-10-2018 PA257_4681 0b61fe132055e88b8f056d14806cf81c 303 SUPERFAMILY SSF46785 7 88 8.16E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4681 0b61fe132055e88b8f056d14806cf81c 303 Pfam PF03466 LysR substrate binding domain 94 296 5.2E-44 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6429 9c33f6ef3abec857e19dfeb82e633400 257 Gene3D G3DSA:3.20.20.370 17 252 4.9E-78 T 12-10-2018 PA257_6429 9c33f6ef3abec857e19dfeb82e633400 257 Pfam PF04748 Divergent polysaccharide deacetylase 35 241 2.2E-72 T 12-10-2018 IPR006837 Divergent polysaccharide deacetylase PA257_6429 9c33f6ef3abec857e19dfeb82e633400 257 SUPERFAMILY SSF88713 31 242 1.22E-65 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PA257_2929 77f2763bd2a4ac9b6606de63cc9f887c 363 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 351 1.6E-138 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 PA257_2929 77f2763bd2a4ac9b6606de63cc9f887c 363 Gene3D G3DSA:3.40.50.620 1 204 1.1E-91 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2929 77f2763bd2a4ac9b6606de63cc9f887c 363 Pfam PF03054 tRNA methyl transferase 1 351 8.2E-136 T 12-10-2018 PA257_2929 77f2763bd2a4ac9b6606de63cc9f887c 363 SUPERFAMILY SSF52402 1 236 9.04E-56 T 12-10-2018 PA257_2929 77f2763bd2a4ac9b6606de63cc9f887c 363 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 352 39.123 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 PA257_2929 77f2763bd2a4ac9b6606de63cc9f887c 363 Gene3D G3DSA:2.40.30.10 274 358 2.1E-28 T 12-10-2018 PA257_2929 77f2763bd2a4ac9b6606de63cc9f887c 363 Gene3D G3DSA:2.30.30.280 205 272 1.4E-26 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 PA257_4955 06c06f9a1d7efe3d662505c32f739074 232 SUPERFAMILY SSF161098 13 215 2.09E-40 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4955 06c06f9a1d7efe3d662505c32f739074 232 Gene3D G3DSA:1.10.3720.10 1 224 1.5E-50 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4955 06c06f9a1d7efe3d662505c32f739074 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 223 1.1E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_4955 06c06f9a1d7efe3d662505c32f739074 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 117 5.3E-22 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 Gene3D G3DSA:3.40.50.300 2 285 9.8E-83 T 12-10-2018 PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 Pfam PF00005 ABC transporter 340 473 1.1E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 Pfam PF12848 ABC transporter 230 304 6.5E-11 T 12-10-2018 IPR032781 ABC-transporter extension domain PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 SUPERFAMILY SSF52540 302 530 3.04E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 Gene3D G3DSA:3.40.50.300 286 554 7.4E-75 T 12-10-2018 PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 SMART SM00382 348 522 2.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 SMART SM00382 31 240 8.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 SUPERFAMILY SSF52540 13 244 2.8E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 7.5E-296 T 12-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 PA257_5774 b9c6ade0fbf9b98c7fdb313004ebe133 554 Pfam PF00005 ABC transporter 22 191 3.9E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0352 ef43e143add52dce1967c0948b068434 392 Pfam PF00487 Fatty acid desaturase 11 214 1.1E-12 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PA257_0352 ef43e143add52dce1967c0948b068434 392 Pfam PF01610 Transposase 270 387 3.0E-9 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PA257_0309 98cfeeb2df4976cc29329d488f174381 337 Gene3D G3DSA:1.10.443.10 106 318 2.2E-67 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_0309 98cfeeb2df4976cc29329d488f174381 337 SUPERFAMILY SSF56349 16 316 1.41E-50 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_0309 98cfeeb2df4976cc29329d488f174381 337 Gene3D G3DSA:1.10.150.130 13 100 7.6E-32 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_0309 98cfeeb2df4976cc29329d488f174381 337 TIGRFAM TIGR02249 integrase_gron: integron integrase 16 330 1.8E-153 T 12-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 PA257_0309 98cfeeb2df4976cc29329d488f174381 337 Pfam PF00589 Phage integrase family 116 317 4.3E-64 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_0309 98cfeeb2df4976cc29329d488f174381 337 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 2.1E-24 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PA257_5244 98cfeeb2df4976cc29329d488f174381 337 Gene3D G3DSA:1.10.443.10 106 318 2.2E-67 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_5244 98cfeeb2df4976cc29329d488f174381 337 SUPERFAMILY SSF56349 16 316 1.41E-50 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_5244 98cfeeb2df4976cc29329d488f174381 337 Gene3D G3DSA:1.10.150.130 13 100 7.6E-32 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_5244 98cfeeb2df4976cc29329d488f174381 337 TIGRFAM TIGR02249 integrase_gron: integron integrase 16 330 1.8E-153 T 12-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 PA257_5244 98cfeeb2df4976cc29329d488f174381 337 Pfam PF00589 Phage integrase family 116 317 4.3E-64 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_5244 98cfeeb2df4976cc29329d488f174381 337 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 2.1E-24 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Gene3D G3DSA:3.30.565.10 562 731 5.1E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SMART SM00448 742 850 5.6E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SUPERFAMILY SSF55874 552 722 3.14E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Gene3D G3DSA:3.30.450.40 178 342 2.4E-9 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Pfam PF00072 Response regulator receiver domain 744 850 1.3E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SMART SM00388 496 561 4.8E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SUPERFAMILY SSF55785 75 175 5.76E-6 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Gene3D G3DSA:3.30.450.20 343 473 4.2E-23 T 12-10-2018 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 679 1.5E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 665 1.5E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 700 1.5E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 706 719 1.5E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 604 720 1.8E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SUPERFAMILY SSF47384 490 558 4.32E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SUPERFAMILY SSF52172 741 855 5.98E-27 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Pfam PF00512 His Kinase A (phospho-acceptor) domain 497 559 1.5E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Gene3D G3DSA:3.40.50.2300 735 857 2.5E-24 T 12-10-2018 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Gene3D G3DSA:1.10.287.130 488 560 6.6E-18 T 12-10-2018 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Pfam PF08448 PAS fold 351 458 1.4E-11 T 12-10-2018 IPR013656 PAS fold-4 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Pfam PF08448 PAS fold 74 171 1.5E-7 T 12-10-2018 IPR013656 PAS fold-4 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 342 463 1.3E-14 T 12-10-2018 IPR000014 PAS domain PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SMART SM00091 345 411 6.1E-7 T 12-10-2018 IPR000014 PAS domain PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SMART SM00387 602 722 1.7E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SMART SM00086 126 169 26.0 T 12-10-2018 IPR001610 PAC motif PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SMART SM00086 414 456 3.2E-7 T 12-10-2018 IPR001610 PAC motif PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 Gene3D G3DSA:3.30.450.20 51 177 1.4E-20 T 12-10-2018 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SUPERFAMILY SSF55781 171 337 2.4E-15 T 12-10-2018 PA257_4557 b46329fc7a7068fb51c2eeb6adc0af75 858 SUPERFAMILY SSF55785 334 454 2.62E-22 T 12-10-2018 IPR035965 PAS domain superfamily PA257_6379 219e64e9a2528d26c5a36c8d74ea90d3 273 SUPERFAMILY SSF81901 117 209 2.35E-12 T 12-10-2018 PA257_6379 219e64e9a2528d26c5a36c8d74ea90d3 273 Gene3D G3DSA:1.25.40.10 42 240 1.4E-34 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6379 219e64e9a2528d26c5a36c8d74ea90d3 273 Pfam PF08238 Sel1 repeat 48 57 95.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6379 219e64e9a2528d26c5a36c8d74ea90d3 273 Pfam PF08238 Sel1 repeat 166 196 16.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6379 219e64e9a2528d26c5a36c8d74ea90d3 273 Pfam PF08238 Sel1 repeat 59 93 4.6E-5 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6379 219e64e9a2528d26c5a36c8d74ea90d3 273 SMART SM00671 165 197 14.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6379 219e64e9a2528d26c5a36c8d74ea90d3 273 SMART SM00671 58 95 0.0041 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6379 219e64e9a2528d26c5a36c8d74ea90d3 273 SMART SM00671 132 164 110.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6379 219e64e9a2528d26c5a36c8d74ea90d3 273 SMART SM00671 96 131 310.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6379 219e64e9a2528d26c5a36c8d74ea90d3 273 SUPERFAMILY SSF81901 22 145 9.42E-20 T 12-10-2018 PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 SUPERFAMILY SSF53335 143 384 1.21E-38 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 Gene3D G3DSA:3.30.750.80 418 509 2.8E-39 T 12-10-2018 PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 7 725 33.196 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 313 319 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 Pfam PF02926 THUMP domain 45 156 1.1E-11 T 12-10-2018 IPR004114 THUMP domain GO:0003723 PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 Gene3D G3DSA:3.40.50.150 172 379 3.0E-138 T 12-10-2018 PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 SMART SM00981 59 157 1.6E-22 T 12-10-2018 IPR004114 THUMP domain GO:0003723 PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 SUPERFAMILY SSF53335 421 720 1.31E-68 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 PIRSF PIRSF037618 2 725 0.0 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 Pfam PF01170 Putative RNA methylase family UPF0020 165 380 1.0E-43 T 12-10-2018 IPR000241 Putative RNA methylase domain PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 Gene3D G3DSA:3.40.50.150 510 725 2.0E-73 T 12-10-2018 PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 Gene3D G3DSA:3.30.2130.30 8 262 3.0E-138 T 12-10-2018 PA257_2251 e7264b347c84e8446a3eb06b6c066380 725 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 504 679 4.2E-19 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PA257_6669 55d6368cae608bb8f9e0615bc50f7f1a 546 SMART SM00382 212 482 2.9E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6669 55d6368cae608bb8f9e0615bc50f7f1a 546 SUPERFAMILY SSF52540 209 477 2.02E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6669 55d6368cae608bb8f9e0615bc50f7f1a 546 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 390 458 2.6E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 SMART SM00421 146 203 1.3E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 SMART SM00448 8 125 2.3E-5 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 SUPERFAMILY SSF52172 10 137 3.95E-13 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 Pfam PF00072 Response regulator receiver domain 11 125 2.5E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 SUPERFAMILY SSF46894 141 204 3.74E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 8.5E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 8.5E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 8.5E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 Gene3D G3DSA:3.40.50.12740 10 208 7.5E-32 T 12-10-2018 PA257_2411 5127963adc56ad285192ccb8a1ecdbc4 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 201 4.1E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0843 37595350c8aa8d61a6ff875d96ca0d9e 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 2.2E-25 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0843 37595350c8aa8d61a6ff875d96ca0d9e 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 4.0E-38 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0843 37595350c8aa8d61a6ff875d96ca0d9e 104 SMART SM00739 3 30 1.2E-4 T 12-10-2018 IPR005824 KOW PA257_0843 37595350c8aa8d61a6ff875d96ca0d9e 104 Pfam PF00467 KOW motif 7 31 4.6E-6 T 12-10-2018 IPR005824 KOW PA257_0843 37595350c8aa8d61a6ff875d96ca0d9e 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0843 37595350c8aa8d61a6ff875d96ca0d9e 104 Gene3D G3DSA:2.30.30.30 1 103 4.0E-39 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 PA257_0843 37595350c8aa8d61a6ff875d96ca0d9e 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 21.4 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0843 37595350c8aa8d61a6ff875d96ca0d9e 104 SUPERFAMILY SSF50104 3 99 9.96E-34 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily PA257_0364 d192a601871560b9c600f63d0efd335d 452 Gene3D G3DSA:3.30.590.10 117 450 2.1E-102 T 12-10-2018 PA257_0364 d192a601871560b9c600f63d0efd335d 452 SUPERFAMILY SSF55931 114 449 2.35E-106 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_0364 d192a601871560b9c600f63d0efd335d 452 SMART SM01230 114 370 2.5E-112 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_0364 d192a601871560b9c600f63d0efd335d 452 Pfam PF00120 Glutamine synthetase, catalytic domain 115 446 3.7E-111 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_0364 d192a601871560b9c600f63d0efd335d 452 SUPERFAMILY SSF54368 6 113 2.62E-17 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_0364 d192a601871560b9c600f63d0efd335d 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 250 265 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PA257_1742 888c0d6f091ed5997e6c5158fbe1e86f 497 ProDom PD339107 ALGINATE ALG8 BIOSYNTHESIS TRANSFERASE TRANSMEMBRANE MEMBRANE 2.4.1.- GLYCOSYL GLYCOSYLTRANSFERASE PRECURSOR 5 497 0.0 T 12-10-2018 PA257_1742 888c0d6f091ed5997e6c5158fbe1e86f 497 SUPERFAMILY SSF53448 154 366 8.44E-12 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_1742 888c0d6f091ed5997e6c5158fbe1e86f 497 Pfam PF13641 Glycosyltransferase like family 2 90 346 6.5E-54 T 12-10-2018 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 19 227 8.3E-91 T 12-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Pfam PF13493 Domain of unknown function (DUF4118) 390 494 2.2E-26 T 12-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Pfam PF00582 Universal stress protein family 248 358 4.3E-11 T 12-10-2018 IPR006016 UspA PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 SUPERFAMILY SSF55781 495 637 3.05E-5 T 12-10-2018 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 SMART SM00387 762 874 8.6E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Gene3D G3DSA:1.10.287.130 644 717 8.7E-18 T 12-10-2018 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Gene3D G3DSA:3.30.565.10 733 877 4.6E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 SUPERFAMILY SSF47384 646 719 1.9E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Gene3D G3DSA:3.40.50.300 16 226 1.5E-96 T 12-10-2018 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 SMART SM00388 650 718 1.2E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Gene3D G3DSA:1.20.120.620 385 490 5.8E-23 T 12-10-2018 IPR038318 KdpD, transmembrane domain superfamily PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Gene3D G3DSA:3.40.50.620 231 361 4.5E-14 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Gene3D G3DSA:3.30.450.40 500 643 1.0E-24 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 SUPERFAMILY SSF52402 248 358 1.05E-13 T 12-10-2018 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 833 851 8.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 799 813 8.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 858 871 8.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 817 827 8.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 767 873 1.4E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 SUPERFAMILY SSF55874 708 876 1.7E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4146 d9054e24f44cc3beb2ee4d27ef120430 885 Pfam PF00512 His Kinase A (phospho-acceptor) domain 651 718 4.0E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4590 1b66128a8dc124a99d024f4d9ba7d883 248 Pfam PF13649 Methyltransferase domain 39 124 3.4E-13 T 12-10-2018 PA257_4590 1b66128a8dc124a99d024f4d9ba7d883 248 Gene3D G3DSA:3.40.50.150 19 241 3.3E-28 T 12-10-2018 PA257_4590 1b66128a8dc124a99d024f4d9ba7d883 248 SUPERFAMILY SSF53335 3 158 1.15E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_4590 1b66128a8dc124a99d024f4d9ba7d883 248 Gene3D G3DSA:1.10.10.2560 133 233 3.3E-28 T 12-10-2018 PA257_4808 d270f302f0bde83c81a929bca69f58d3 383 SUPERFAMILY SSF53901 8 224 1.87E-23 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4808 d270f302f0bde83c81a929bca69f58d3 383 Gene3D G3DSA:3.40.47.10 2 379 1.1E-111 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4808 d270f302f0bde83c81a929bca69f58d3 383 PIRSF PIRSF000429 3 375 5.3E-25 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_4808 d270f302f0bde83c81a929bca69f58d3 383 SUPERFAMILY SSF53901 248 369 4.74E-25 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4808 d270f302f0bde83c81a929bca69f58d3 383 Pfam PF02803 Thiolase, C-terminal domain 253 358 9.2E-7 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.6E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 365 381 1.6E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.6E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 413 430 1.6E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 327 1.6E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 Gene3D G3DSA:1.10.940.10 1 140 2.3E-41 T 12-10-2018 IPR035926 NusB-like superfamily PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 428 1.7E-62 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 Gene3D G3DSA:3.30.70.1170 170 227 7.6E-25 T 12-10-2018 PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 Pfam PF01029 NusB family 1 123 2.0E-21 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 Gene3D G3DSA:3.40.50.150 228 431 1.0E-62 T 12-10-2018 PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 SUPERFAMILY SSF53335 135 431 2.13E-71 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 314 325 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 430 7.9E-129 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 Gene3D G3DSA:1.10.287.730 143 169 4.6E-6 T 12-10-2018 PA257_0026 21aad44a0c0a6e319141ce6899954d41 434 SUPERFAMILY SSF48013 1 146 4.45E-35 T 12-10-2018 IPR035926 NusB-like superfamily PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 Pfam PF01842 ACT domain 352 419 3.8E-16 T 12-10-2018 IPR002912 ACT domain PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 Gene3D G3DSA:3.30.70.260 347 421 4.9E-165 T 12-10-2018 PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 SUPERFAMILY SSF55347 135 300 1.5E-52 T 12-10-2018 PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 SUPERFAMILY SSF51735 2 156 6.26E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 SUPERFAMILY SSF55021 350 420 2.41E-15 T 12-10-2018 PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 PIRSF PIRSF000098 1 433 2.8E-167 T 12-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 Pfam PF00742 Homoserine dehydrogenase 135 313 9.5E-64 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 Gene3D G3DSA:3.30.360.10 134 346 4.9E-165 T 12-10-2018 PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 Gene3D G3DSA:3.40.50.720 4 338 4.9E-165 T 12-10-2018 PA257_1483 7bcd5def170badf68f83c5ec0ec03df7 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 3.0E-25 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PA257_2780 10eb806613c5c8ec20f6c00558070338 156 PIRSF PIRSF006865 1 156 2.0E-65 T 12-10-2018 IPR005658 Proteinase inhibitor I11, ecotin PA257_2780 10eb806613c5c8ec20f6c00558070338 156 Gene3D G3DSA:4.10.1230.10 100 156 2.0E-27 T 12-10-2018 IPR027438 Ecotin, C-terminal PA257_2780 10eb806613c5c8ec20f6c00558070338 156 Pfam PF03974 Ecotin 26 146 1.1E-51 T 12-10-2018 IPR005658 Proteinase inhibitor I11, ecotin PA257_2780 10eb806613c5c8ec20f6c00558070338 156 Gene3D G3DSA:2.60.40.550 17 99 4.1E-32 T 12-10-2018 PA257_2780 10eb806613c5c8ec20f6c00558070338 156 SUPERFAMILY SSF49772 23 154 5.36E-55 T 12-10-2018 IPR036198 Ecotin superfamily PA257_2780 10eb806613c5c8ec20f6c00558070338 156 Hamap MF_00706 Ecotin [eco]. 1 156 40.119 T 12-10-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria PA257_1565 861a105354ee3f8f00326bcc74513910 246 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PA257_1565 861a105354ee3f8f00326bcc74513910 246 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.671 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1565 861a105354ee3f8f00326bcc74513910 246 Pfam PF00318 Ribosomal protein S2 9 224 8.7E-95 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1565 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1565 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1565 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1565 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1565 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1565 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.2E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1565 861a105354ee3f8f00326bcc74513910 246 Gene3D G3DSA:1.10.287.610 103 150 1.1E-91 T 12-10-2018 PA257_1565 861a105354ee3f8f00326bcc74513910 246 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PA257_1565 861a105354ee3f8f00326bcc74513910 246 Gene3D G3DSA:3.40.50.10490 8 219 1.1E-91 T 12-10-2018 PA257_1565 861a105354ee3f8f00326bcc74513910 246 SUPERFAMILY SSF52313 6 231 4.45E-96 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily PA257_1565 861a105354ee3f8f00326bcc74513910 246 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 9.0E-106 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6261 e18472dcdec531be062c93c2e71647ac 393 Gene3D G3DSA:3.40.640.10 64 284 3.1E-119 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6261 e18472dcdec531be062c93c2e71647ac 393 SUPERFAMILY SSF53383 15 383 6.78E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6261 e18472dcdec531be062c93c2e71647ac 393 Gene3D G3DSA:3.90.1150.10 29 381 3.1E-119 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_6261 e18472dcdec531be062c93c2e71647ac 393 Pfam PF00155 Aminotransferase class I and II 33 382 7.5E-71 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_6261 e18472dcdec531be062c93c2e71647ac 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 Pfam PF12137 RNA polymerase recycling family C-terminal 588 946 2.6E-139 T 12-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 Gene3D G3DSA:2.30.30.930 56 113 4.8E-15 T 12-10-2018 PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 Gene3D G3DSA:3.30.360.80 696 767 3.2E-30 T 12-10-2018 PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 SMART SM00490 500 584 1.2E-15 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 Pfam PF00176 SNF2 family N-terminal domain 173 358 2.5E-14 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 Pfam PF00271 Helicase conserved C-terminal domain 475 584 4.3E-13 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 Gene3D G3DSA:3.40.50.300 423 616 3.2E-42 T 12-10-2018 PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 Gene3D G3DSA:2.30.30.140 2 54 1.7E-22 T 12-10-2018 PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 2 948 28.073 T 12-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 Gene3D G3DSA:3.40.50.10810 149 422 3.8E-87 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 SMART SM00487 149 346 5.0E-19 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 SUPERFAMILY SSF52540 152 346 2.48E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1969 8d34b4cf6389e4f8f1f25e12037e3828 948 SUPERFAMILY SSF52540 270 630 2.92E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 Pfam PF00034 Cytochrome c 30 127 6.4E-5 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 Gene3D G3DSA:1.10.760.10 2 131 1.7E-10 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 SUPERFAMILY SSF46626 315 417 4.73E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 Gene3D G3DSA:1.10.760.10 163 287 2.1E-8 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 SUPERFAMILY SSF46626 176 292 1.44E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 PRINTS PR00605 Class IC cytochrome C signature 322 333 2.6E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 PRINTS PR00605 Class IC cytochrome C signature 375 397 2.6E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 SUPERFAMILY SSF46626 19 152 3.7E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 313 397 8.6E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 Gene3D G3DSA:1.10.760.10 293 426 1.6E-34 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3378 7a97057f36d32169922bdc7c05c7ae65 439 PIRSF PIRSF000018 2 432 8.5E-168 T 12-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 PA257_1116 1b52ef87fd1292014909cc36d7e8ab88 310 Pfam PF04773 FecR protein 67 161 1.5E-15 T 12-10-2018 IPR006860 FecR protein PA257_1116 1b52ef87fd1292014909cc36d7e8ab88 310 PIRSF PIRSF029644 3 310 2.0E-105 T 12-10-2018 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 PA257_1116 1b52ef87fd1292014909cc36d7e8ab88 310 Gene3D G3DSA:2.60.120.1440 66 200 4.6E-6 T 12-10-2018 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 450 554 1.0E-30 T 12-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 Gene3D G3DSA:2.60.40.1730 16 200 7.8E-72 T 12-10-2018 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 559 885 7.3E-123 T 12-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 Gene3D G3DSA:1.25.50.10 556 885 5.0E-126 T 12-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 Gene3D G3DSA:1.10.390.10 286 449 1.3E-66 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 Pfam PF01433 Peptidase family M1 domain 214 445 2.7E-60 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 Gene3D G3DSA:2.60.40.1840 450 555 3.7E-36 T 12-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 2.4E-10 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 2.4E-10 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 2.4E-10 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 2.4E-10 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 2.4E-10 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 Gene3D G3DSA:1.10.1740.60 202 285 2.4E-42 T 12-10-2018 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 884 0.0 T 12-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 SUPERFAMILY SSF55486 209 457 6.04E-78 T 12-10-2018 PA257_2218 a1b3e78948cc8f9f5e254747bb107aa4 885 SUPERFAMILY SSF63737 4 199 2.22E-42 T 12-10-2018 PA257_3065 30b1975ba1c90f1ec384f6aab1989fe9 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 1.0E-37 T 12-10-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 PA257_3065 30b1975ba1c90f1ec384f6aab1989fe9 96 Gene3D G3DSA:3.30.70.1060 1 94 6.5E-35 T 12-10-2018 PA257_3065 30b1975ba1c90f1ec384f6aab1989fe9 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 1.4E-44 T 12-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 PA257_3065 30b1975ba1c90f1ec384f6aab1989fe9 96 PIRSF PIRSF001486 1 94 2.0E-44 T 12-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 PA257_3065 30b1975ba1c90f1ec384f6aab1989fe9 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 4.0E-28 T 12-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 PA257_3065 30b1975ba1c90f1ec384f6aab1989fe9 96 SUPERFAMILY SSF54909 1 95 3.75E-35 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_3989 e549a6a505ae136c5cfc7c8b5ccc8f92 555 Pfam PF00069 Protein kinase domain 265 460 5.5E-26 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PA257_3989 e549a6a505ae136c5cfc7c8b5ccc8f92 555 Gene3D G3DSA:1.10.510.10 252 523 3.0E-40 T 12-10-2018 PA257_3989 e549a6a505ae136c5cfc7c8b5ccc8f92 555 Pfam PF13672 Protein phosphatase 2C 17 186 4.7E-8 T 12-10-2018 PA257_3989 e549a6a505ae136c5cfc7c8b5ccc8f92 555 SMART SM00220 261 512 2.2E-13 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PA257_3989 e549a6a505ae136c5cfc7c8b5ccc8f92 555 SUPERFAMILY SSF81606 4 228 8.89E-46 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_3989 e549a6a505ae136c5cfc7c8b5ccc8f92 555 SMART SM00332 1 226 2.9E-5 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_3989 e549a6a505ae136c5cfc7c8b5ccc8f92 555 Gene3D G3DSA:3.60.40.10 3 231 1.5E-40 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_3989 e549a6a505ae136c5cfc7c8b5ccc8f92 555 SMART SM00331 22 228 1.0E-11 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_3989 e549a6a505ae136c5cfc7c8b5ccc8f92 555 SUPERFAMILY SSF56112 246 513 1.2E-50 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_2951 7b2f9c0c71c5c3454a01041c63a0e7da 131 Gene3D G3DSA:3.40.1260.10 1 127 2.2E-42 T 12-10-2018 IPR027396 DsrEFH-like PA257_2951 7b2f9c0c71c5c3454a01041c63a0e7da 131 Pfam PF02635 DsrE/DsrF-like family 1 127 3.1E-24 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein PA257_2951 7b2f9c0c71c5c3454a01041c63a0e7da 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 127 4.0E-44 T 12-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 PA257_2951 7b2f9c0c71c5c3454a01041c63a0e7da 131 SUPERFAMILY SSF75169 1 127 4.71E-34 T 12-10-2018 IPR027396 DsrEFH-like PA257_5653 3780a88480ae6e7f7857509ce4ef4e3d 311 Gene3D G3DSA:3.40.50.300 90 310 6.5E-43 T 12-10-2018 PA257_5653 3780a88480ae6e7f7857509ce4ef4e3d 311 Pfam PF00437 Type II/IV secretion system protein 51 258 1.9E-24 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_5653 3780a88480ae6e7f7857509ce4ef4e3d 311 SUPERFAMILY SSF52540 70 271 1.3E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1262 2d0674215e36e7f30273481c9cbaf25c 784 Gene3D G3DSA:3.55.50.30 42 113 2.4E-23 T 12-10-2018 PA257_1262 2d0674215e36e7f30273481c9cbaf25c 784 SUPERFAMILY SSF56935 126 784 3.46E-119 T 12-10-2018 PA257_1262 2d0674215e36e7f30273481c9cbaf25c 784 Pfam PF07715 TonB-dependent Receptor Plug Domain 141 254 1.3E-18 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_1262 2d0674215e36e7f30273481c9cbaf25c 784 Pfam PF00593 TonB dependent receptor 344 781 2.5E-52 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_1262 2d0674215e36e7f30273481c9cbaf25c 784 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 767 784 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_1262 2d0674215e36e7f30273481c9cbaf25c 784 Pfam PF07660 Secretin and TonB N terminus short domain 64 113 2.2E-9 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_1262 2d0674215e36e7f30273481c9cbaf25c 784 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 142 784 4.0E-126 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_1262 2d0674215e36e7f30273481c9cbaf25c 784 SMART SM00965 63 114 9.5E-14 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_1262 2d0674215e36e7f30273481c9cbaf25c 784 Gene3D G3DSA:2.170.130.10 138 263 3.5E-29 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_1262 2d0674215e36e7f30273481c9cbaf25c 784 Gene3D G3DSA:2.40.170.20 267 784 5.0E-139 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_2425 0e45e3f49f7cac1ecab2a4f02be685af 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 7.7E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2425 0e45e3f49f7cac1ecab2a4f02be685af 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 7.7E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2425 0e45e3f49f7cac1ecab2a4f02be685af 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 4.7E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2425 0e45e3f49f7cac1ecab2a4f02be685af 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 63 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_2425 0e45e3f49f7cac1ecab2a4f02be685af 198 SUPERFAMILY SSF48498 87 195 3.91E-14 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_2425 0e45e3f49f7cac1ecab2a4f02be685af 198 Gene3D G3DSA:1.10.357.10 2 198 3.8E-73 T 12-10-2018 PA257_2425 0e45e3f49f7cac1ecab2a4f02be685af 198 SUPERFAMILY SSF46689 11 91 1.41E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6225 a1a580d99c6ba17d4fe71aa1780294df 400 TIGRFAM TIGR01933 hflK: HflK protein 92 353 9.8E-113 T 12-10-2018 IPR010201 HflK GO:0016021 PA257_6225 a1a580d99c6ba17d4fe71aa1780294df 400 PRINTS PR00721 Stomatin signature 226 244 6.5E-7 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_6225 a1a580d99c6ba17d4fe71aa1780294df 400 PRINTS PR00721 Stomatin signature 97 119 6.5E-7 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_6225 a1a580d99c6ba17d4fe71aa1780294df 400 PRINTS PR00721 Stomatin signature 144 165 6.5E-7 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_6225 a1a580d99c6ba17d4fe71aa1780294df 400 Gene3D G3DSA:3.30.479.30 120 252 8.5E-22 T 12-10-2018 PA257_6225 a1a580d99c6ba17d4fe71aa1780294df 400 SUPERFAMILY SSF117892 122 255 9.94E-24 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily PA257_6225 a1a580d99c6ba17d4fe71aa1780294df 400 SMART SM00244 90 250 2.8E-33 T 12-10-2018 IPR001107 Band 7 domain PA257_6225 a1a580d99c6ba17d4fe71aa1780294df 400 Pfam PF01145 SPFH domain / Band 7 family 94 265 2.1E-29 T 12-10-2018 IPR001107 Band 7 domain PA257_6225 a1a580d99c6ba17d4fe71aa1780294df 400 Pfam PF12221 Bacterial membrane protein N terminal 1 55 1.8E-15 T 12-10-2018 IPR020980 Menbrane protein HflK, N-terminal PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 SUPERFAMILY SSF89000 388 437 1.26E-13 T 12-10-2018 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 8 549 54.366 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 SUPERFAMILY SSF51569 22 330 1.59E-98 T 12-10-2018 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 Gene3D G3DSA:3.20.20.70 12 376 8.5E-156 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 7 548 9.9E-242 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 SMART SM00917 422 548 7.7E-31 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 SUPERFAMILY SSF110921 443 547 1.96E-33 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 Gene3D G3DSA:3.30.160.270 377 547 1.9E-56 T 12-10-2018 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 Pfam PF00682 HMGL-like 33 313 1.8E-77 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PA257_1376 a507088eb505b280a730cf69cf6ab04d 556 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 547 9.6E-29 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PA257_2295 8f873f4603257b381908671416a89ad2 161 SUPERFAMILY SSF52540 45 159 1.59E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2295 8f873f4603257b381908671416a89ad2 161 Gene3D G3DSA:3.40.50.300 43 161 4.0E-28 T 12-10-2018 PA257_2295 8f873f4603257b381908671416a89ad2 161 Pfam PF03846 Cell division inhibitor SulA 47 133 2.3E-8 T 12-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 PA257_1267 8a047b66bf79afbe686a7e6de6a397f1 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PA257_1267 8a047b66bf79afbe686a7e6de6a397f1 325 SUPERFAMILY SSF51735 100 287 8.86E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1267 8a047b66bf79afbe686a7e6de6a397f1 325 Gene3D G3DSA:3.40.50.720 97 286 2.0E-109 T 12-10-2018 PA257_1267 8a047b66bf79afbe686a7e6de6a397f1 325 SUPERFAMILY SSF52283 1 133 1.7E-29 T 12-10-2018 PA257_1267 8a047b66bf79afbe686a7e6de6a397f1 325 Gene3D G3DSA:3.40.50.720 5 313 2.0E-109 T 12-10-2018 PA257_1267 8a047b66bf79afbe686a7e6de6a397f1 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 1.2E-28 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PA257_1267 8a047b66bf79afbe686a7e6de6a397f1 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 286 5.6E-59 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 SUPERFAMILY SSF56425 238 353 8.07E-44 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 Gene3D G3DSA:1.20.58.100 425 536 4.8E-41 T 12-10-2018 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 SUPERFAMILY SSF51905 3 448 1.5E-72 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 Pfam PF00890 FAD binding domain 8 392 3.8E-107 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 3.8E-13 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 Gene3D G3DSA:3.90.700.10 248 358 3.4E-155 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 SUPERFAMILY SSF46977 425 529 1.57E-31 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 520 3.4E-201 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 Gene3D G3DSA:3.50.50.60 8 403 3.4E-155 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 PIRSF PIRSF000171 336 533 4.6E-11 T 12-10-2018 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 PIRSF PIRSF000171 1 323 1.5E-22 T 12-10-2018 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 5.3E-9 T 12-10-2018 PA257_5148 bd3d1d150a8f39f4396815b8bb01a56a 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.3E-9 T 12-10-2018 PA257_4561 b8d9d9a626e75fffdaa2659c239c10c9 294 Gene3D G3DSA:3.40.50.1820 14 292 3.9E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4561 b8d9d9a626e75fffdaa2659c239c10c9 294 PIRSF PIRSF037442 6 294 1.0E-93 T 12-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 PA257_4561 b8d9d9a626e75fffdaa2659c239c10c9 294 Pfam PF12146 Serine aminopeptidase, S33 46 125 1.3E-9 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 PA257_4561 b8d9d9a626e75fffdaa2659c239c10c9 294 SUPERFAMILY SSF53474 9 290 1.88E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SMART SM00091 292 358 0.025 T 12-10-2018 IPR000014 PAS domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SMART SM00091 717 784 0.83 T 12-10-2018 IPR000014 PAS domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SMART SM00091 853 920 6.1E-8 T 12-10-2018 IPR000014 PAS domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SMART SM00091 584 653 1.7E-5 T 12-10-2018 IPR000014 PAS domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SUPERFAMILY SSF55785 283 381 3.77E-8 T 12-10-2018 IPR035965 PAS domain superfamily PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SUPERFAMILY SSF55785 842 965 4.89E-22 T 12-10-2018 IPR035965 PAS domain superfamily PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Gene3D G3DSA:3.20.20.450 1157 1409 2.1E-115 T 12-10-2018 IPR035919 EAL domain superfamily PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Gene3D G3DSA:3.30.450.20 577 703 7.1E-19 T 12-10-2018 PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Pfam PF08447 PAS fold 608 699 4.0E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Gene3D G3DSA:3.30.70.270 977 1156 3.5E-65 T 12-10-2018 PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Pfam PF13426 PAS domain 865 966 8.6E-17 T 12-10-2018 IPR000014 PAS domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Pfam PF13426 PAS domain 729 844 2.2E-7 T 12-10-2018 IPR000014 PAS domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Gene3D G3DSA:3.30.450.20 715 855 1.6E-20 T 12-10-2018 PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Gene3D G3DSA:3.30.450.20 281 417 9.7E-9 T 12-10-2018 PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SMART SM00086 803 845 7.4E-4 T 12-10-2018 IPR001610 PAC motif PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SMART SM00086 925 967 1.2E-5 T 12-10-2018 IPR001610 PAC motif PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SMART SM00086 662 705 0.0065 T 12-10-2018 IPR001610 PAC motif PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 975 1141 4.3E-41 T 12-10-2018 IPR000160 GGDEF domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SMART SM00267 967 1143 2.1E-71 T 12-10-2018 IPR000160 GGDEF domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SMART SM00052 1153 1399 4.5E-126 T 12-10-2018 IPR001633 EAL domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SUPERFAMILY SSF141868 1158 1405 5.1E-92 T 12-10-2018 IPR035919 EAL domain superfamily PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SUPERFAMILY SSF55785 707 843 1.82E-14 T 12-10-2018 IPR035965 PAS domain superfamily PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 978 1139 1.4E-51 T 12-10-2018 IPR000160 GGDEF domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SUPERFAMILY SSF55785 480 579 2.27E-5 T 12-10-2018 IPR035965 PAS domain superfamily PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 581 712 5.7E-11 T 12-10-2018 IPR000014 PAS domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 713 852 3.5E-11 T 12-10-2018 IPR000014 PAS domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 857 973 1.5E-18 T 12-10-2018 IPR000014 PAS domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Pfam PF13188 PAS domain 305 349 0.015 T 12-10-2018 IPR000014 PAS domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Gene3D G3DSA:3.30.450.20 856 976 1.7E-31 T 12-10-2018 PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SUPERFAMILY SSF55785 569 703 1.1E-16 T 12-10-2018 IPR035965 PAS domain superfamily PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 Pfam PF00563 EAL domain 1159 1394 2.3E-76 T 12-10-2018 IPR001633 EAL domain PA257_5781 ad858e61e48ae04532e5a01ed7ba1140 1415 SUPERFAMILY SSF55073 983 1144 3.61E-50 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 67 85 4.7E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 86 105 4.7E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 144 163 4.7E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 202 219 4.7E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 42 63 4.7E-10 T 12-10-2018 IPR006129 Adhesin B GO:0007155 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 SUPERFAMILY SSF53807 41 313 9.81E-68 T 12-10-2018 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 Gene3D G3DSA:3.40.50.1980 41 205 3.6E-36 T 12-10-2018 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 255 273 7.5E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 202 223 7.5E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 73 86 7.5E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 86 103 7.5E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 Gene3D G3DSA:3.40.50.1980 208 313 1.5E-21 T 12-10-2018 PA257_3233 39a82e352e0afacef9d91f703d929e9d 317 Pfam PF01297 Zinc-uptake complex component A periplasmic 48 310 1.3E-53 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PA257_1038 06ea556bacfdcfb66ebab23ce35ce30f 396 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.902 T 12-10-2018 IPR023495 Sugar efflux transporter, putative PA257_1038 06ea556bacfdcfb66ebab23ce35ce30f 396 Gene3D G3DSA:1.20.1250.20 8 384 5.8E-42 T 12-10-2018 PA257_1038 06ea556bacfdcfb66ebab23ce35ce30f 396 SUPERFAMILY SSF103473 7 385 2.35E-54 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1038 06ea556bacfdcfb66ebab23ce35ce30f 396 Pfam PF07690 Major Facilitator Superfamily 18 348 2.1E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1100 2e9e60e64d8e6f3bc84acc0129aa10e3 171 SUPERFAMILY SSF101307 17 162 4.71E-46 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 PA257_1100 2e9e60e64d8e6f3bc84acc0129aa10e3 171 Pfam PF04608 Phosphatidylglycerophosphatase A 23 160 1.4E-52 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 PA257_1100 2e9e60e64d8e6f3bc84acc0129aa10e3 171 PIRSF PIRSF006162 14 169 1.9E-50 T 12-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 PA257_5596 58d59d25b35b74c01c648d940800ede7 282 SUPERFAMILY SSF54675 12 114 7.06E-32 T 12-10-2018 PA257_5596 58d59d25b35b74c01c648d940800ede7 282 Gene3D G3DSA:3.90.1170.20 12 279 1.3E-113 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 PA257_5596 58d59d25b35b74c01c648d940800ede7 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 17 279 1.5E-94 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 PA257_5596 58d59d25b35b74c01c648d940800ede7 282 Gene3D G3DSA:3.20.20.70 124 270 1.3E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_5596 58d59d25b35b74c01c648d940800ede7 282 SUPERFAMILY SSF51690 116 280 2.04E-60 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PA257_5596 58d59d25b35b74c01c648d940800ede7 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 25 113 2.3E-25 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 PA257_5596 58d59d25b35b74c01c648d940800ede7 282 PIRSF PIRSF006250 7 282 5.4E-109 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 PA257_5596 58d59d25b35b74c01c648d940800ede7 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 116 279 1.2E-56 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 PA257_3358 e1df346455bc4fb3bb4cd82b501d90e7 514 Pfam PF01435 Peptidase family M48 281 459 6.9E-13 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PA257_3358 e1df346455bc4fb3bb4cd82b501d90e7 514 Gene3D G3DSA:3.30.2010.10 222 316 7.6E-6 T 12-10-2018 PA257_4336 83d5dbc190d12218af8c67335fa64e60 262 PIRSF PIRSF002884 26 262 3.5E-94 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 PA257_4336 83d5dbc190d12218af8c67335fa64e60 262 SUPERFAMILY SSF75708 38 261 1.18E-61 T 12-10-2018 PA257_4336 83d5dbc190d12218af8c67335fa64e60 262 Gene3D G3DSA:1.10.287.500 70 203 1.4E-45 T 12-10-2018 PA257_4336 83d5dbc190d12218af8c67335fa64e60 262 Pfam PF04344 Chemotaxis phosphatase, CheZ 50 262 3.0E-75 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 PA257_6577 9499d903aa76bf393c017881a7c69f12 184 SUPERFAMILY SSF101327 7 171 2.09E-40 T 12-10-2018 IPR036255 YgfB-like superfamily PA257_6577 9499d903aa76bf393c017881a7c69f12 184 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 4 182 31.486 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 PA257_6577 9499d903aa76bf393c017881a7c69f12 184 Gene3D G3DSA:1.20.120.740 1 178 9.0E-52 T 12-10-2018 PA257_6577 9499d903aa76bf393c017881a7c69f12 184 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 172 2.3E-30 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 PA257_1967 435bf2c8bd6046df6b5c8f11431d9c5b 151 PRINTS PR01438 Universal stress protein signature 2 20 1.4E-20 T 12-10-2018 IPR006015 Universal stress protein A PA257_1967 435bf2c8bd6046df6b5c8f11431d9c5b 151 PRINTS PR01438 Universal stress protein signature 109 121 1.4E-20 T 12-10-2018 IPR006015 Universal stress protein A PA257_1967 435bf2c8bd6046df6b5c8f11431d9c5b 151 PRINTS PR01438 Universal stress protein signature 127 149 1.4E-20 T 12-10-2018 IPR006015 Universal stress protein A PA257_1967 435bf2c8bd6046df6b5c8f11431d9c5b 151 SUPERFAMILY SSF52402 1 150 3.89E-34 T 12-10-2018 PA257_1967 435bf2c8bd6046df6b5c8f11431d9c5b 151 Gene3D G3DSA:3.40.50.620 1 149 7.5E-38 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1967 435bf2c8bd6046df6b5c8f11431d9c5b 151 Pfam PF00582 Universal stress protein family 1 149 1.3E-32 T 12-10-2018 IPR006016 UspA PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 SMART SM00846 6 160 3.7E-68 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 Gene3D G3DSA:3.40.50.720 7 335 1.0E-118 T 12-10-2018 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 7 108 7.7E-32 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 SUPERFAMILY SSF55347 160 324 3.27E-56 T 12-10-2018 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 279 294 2.4E-24 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 115 128 2.4E-24 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 238 255 2.4E-24 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 181 197 2.4E-24 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 154 172 2.4E-24 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 7 335 9.9E-187 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 SUPERFAMILY SSF51735 7 175 4.38E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 PIRSF PIRSF000149 4 345 1.9E-131 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 Gene3D G3DSA:3.30.360.10 159 325 1.0E-118 T 12-10-2018 PA257_0694 d9a860de488f409a211a52e6e8bdda8b 353 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 166 322 3.0E-50 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 SMART SM00938 4 105 4.6E-66 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 Gene3D G3DSA:3.30.70.120 1 112 1.6E-45 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 23 41 1.5E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 83 103 1.5E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 2 17 1.5E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 52 75 1.5E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 SUPERFAMILY SSF54913 1 112 6.35E-45 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 PIRSF PIRSF039144 1 112 4.8E-55 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 PA257_6645 83db47bc8df9010c24883e7f9c6e6061 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.9E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PA257_2179 a8be0c31547178063df844cb7d4d0666 370 SMART SM00859 3 122 6.3E-28 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PA257_2179 a8be0c31547178063df844cb7d4d0666 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PA257_2179 a8be0c31547178063df844cb7d4d0666 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.434 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PA257_2179 a8be0c31547178063df844cb7d4d0666 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 122 8.9E-25 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PA257_2179 a8be0c31547178063df844cb7d4d0666 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 4.3E-197 T 12-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PA257_2179 a8be0c31547178063df844cb7d4d0666 370 SUPERFAMILY SSF51735 1 147 1.16E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2179 a8be0c31547178063df844cb7d4d0666 370 PIRSF PIRSF000148 1 370 2.2E-64 T 12-10-2018 PA257_2179 a8be0c31547178063df844cb7d4d0666 370 SUPERFAMILY SSF55347 134 355 3.35E-76 T 12-10-2018 PA257_2179 a8be0c31547178063df844cb7d4d0666 370 Gene3D G3DSA:3.40.50.720 4 357 2.7E-148 T 12-10-2018 PA257_2179 a8be0c31547178063df844cb7d4d0666 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 4.4E-63 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PA257_2179 a8be0c31547178063df844cb7d4d0666 370 Gene3D G3DSA:3.30.360.10 135 351 2.7E-148 T 12-10-2018 PA257_2553 f4de6b4bc05a6e4833bf0751a05c2349 279 SUPERFAMILY SSF55874 99 240 4.38E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2553 f4de6b4bc05a6e4833bf0751a05c2349 279 Gene3D G3DSA:3.30.565.10 109 238 1.9E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2553 f4de6b4bc05a6e4833bf0751a05c2349 279 Pfam PF00512 His Kinase A (phospho-acceptor) domain 42 105 2.2E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2553 f4de6b4bc05a6e4833bf0751a05c2349 279 SMART SM00388 42 108 3.4E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2553 f4de6b4bc05a6e4833bf0751a05c2349 279 SUPERFAMILY SSF47384 31 105 2.94E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2553 f4de6b4bc05a6e4833bf0751a05c2349 279 Gene3D G3DSA:1.10.287.130 34 106 1.8E-21 T 12-10-2018 PA257_2553 f4de6b4bc05a6e4833bf0751a05c2349 279 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 150 224 6.0E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3381 9d5dd602ca17ad3c06ba8baf98b39e1f 328 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 175 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PA257_3381 9d5dd602ca17ad3c06ba8baf98b39e1f 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 318 4.7E-28 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PA257_3381 9d5dd602ca17ad3c06ba8baf98b39e1f 328 SUPERFAMILY SSF51735 99 287 1.41E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3381 9d5dd602ca17ad3c06ba8baf98b39e1f 328 Gene3D G3DSA:3.40.50.720 96 287 6.5E-108 T 12-10-2018 PA257_3381 9d5dd602ca17ad3c06ba8baf98b39e1f 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 286 4.4E-63 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PA257_3381 9d5dd602ca17ad3c06ba8baf98b39e1f 328 Gene3D G3DSA:3.40.50.720 3 313 6.5E-108 T 12-10-2018 PA257_3381 9d5dd602ca17ad3c06ba8baf98b39e1f 328 SUPERFAMILY SSF52283 1 133 7.87E-28 T 12-10-2018 PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 SUPERFAMILY SSF158472 175 222 4.18E-5 T 12-10-2018 PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 SMART SM00304 171 224 2.2E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 SUPERFAMILY SSF47384 208 291 9.61E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 291 2.1E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 SMART SM00388 225 291 1.8E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 SUPERFAMILY SSF55874 280 438 7.99E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 Gene3D G3DSA:3.30.565.10 296 442 1.7E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 436 4.5E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 8 438 1.9E-168 T 12-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 Gene3D G3DSA:1.10.287.130 175 291 9.9E-25 T 12-10-2018 PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 SMART SM00387 334 442 8.8E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 1.8E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.8E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2664 3b9f4a48e0fea78fd8f3c979175e2945 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.8E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0544 d96f290186cd04b6121a312428ab3a72 121 Pfam PF00072 Response regulator receiver domain 4 116 3.8E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0544 d96f290186cd04b6121a312428ab3a72 121 SUPERFAMILY SSF52172 1 120 9.53E-39 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0544 d96f290186cd04b6121a312428ab3a72 121 Gene3D G3DSA:3.40.50.12740 1 121 2.9E-44 T 12-10-2018 PA257_0544 d96f290186cd04b6121a312428ab3a72 121 SMART SM00448 2 115 3.4E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0778 1024f4ae939868a85e9de6dfc98470b1 57 Pfam PF05489 Phage Tail Protein X 1 50 1.4E-21 T 12-10-2018 IPR008861 Phage Tail Protein X-like PA257_0778 1024f4ae939868a85e9de6dfc98470b1 57 Gene3D G3DSA:3.10.350.10 1 57 9.1E-16 T 12-10-2018 IPR036779 LysM domain superfamily PA257_4214 8a59a314602f6e66c007ff4f45514b60 293 Pfam PF03466 LysR substrate binding domain 91 288 7.6E-38 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4214 8a59a314602f6e66c007ff4f45514b60 293 Gene3D G3DSA:1.10.10.10 1 87 1.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4214 8a59a314602f6e66c007ff4f45514b60 293 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 7 285 4.6E-121 T 12-10-2018 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type PA257_4214 8a59a314602f6e66c007ff4f45514b60 293 SUPERFAMILY SSF53850 92 289 2.86E-36 T 12-10-2018 PA257_4214 8a59a314602f6e66c007ff4f45514b60 293 SUPERFAMILY SSF46785 3 98 1.04E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4214 8a59a314602f6e66c007ff4f45514b60 293 Gene3D G3DSA:3.40.190.290 92 291 9.0E-36 T 12-10-2018 PA257_4214 8a59a314602f6e66c007ff4f45514b60 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.6E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4214 8a59a314602f6e66c007ff4f45514b60 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.5E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4214 8a59a314602f6e66c007ff4f45514b60 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.5E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4214 8a59a314602f6e66c007ff4f45514b60 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.5E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6361 4862f9b72a6271ba7775ca9c3000c55e 141 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 116 16.945 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PA257_6361 4862f9b72a6271ba7775ca9c3000c55e 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 8.7E-19 T 12-10-2018 PA257_6361 4862f9b72a6271ba7775ca9c3000c55e 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 8.7E-19 T 12-10-2018 PA257_6361 4862f9b72a6271ba7775ca9c3000c55e 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 8.7E-19 T 12-10-2018 PA257_6361 4862f9b72a6271ba7775ca9c3000c55e 141 Pfam PF02416 mttA/Hcf106 family 4 49 3.7E-8 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PA257_6361 4862f9b72a6271ba7775ca9c3000c55e 141 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 76 2.8E-24 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 Gene3D G3DSA:3.40.50.620 35 384 1.6E-125 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 SUPERFAMILY SSF50715 383 597 1.26E-56 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 Gene3D G3DSA:2.40.240.10 391 515 3.7E-63 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 71 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 SUPERFAMILY SSF52374 53 389 1.44E-88 T 12-10-2018 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 383 578 1.1E-44 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 PRINTS PR00987 Glutamyl-tRNA synthetase signature 57 69 9.8E-11 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 PRINTS PR00987 Glutamyl-tRNA synthetase signature 248 258 9.8E-11 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 PRINTS PR00987 Glutamyl-tRNA synthetase signature 86 99 9.8E-11 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 PRINTS PR00987 Glutamyl-tRNA synthetase signature 71 82 9.8E-11 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 53 379 8.3E-95 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 Gene3D G3DSA:2.40.240.10 385 595 3.7E-63 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_2534 0475c1fabd3fa43850fd5c7d21007772 601 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 54 599 1.2E-191 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Pfam PF04542 Sigma-70 region 2 55 123 1.1E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Pfam PF00140 Sigma-70 factor, region 1.2 17 41 6.9E-6 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 282 2.9E-124 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 6.8E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 6.8E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 78 91 6.8E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 233 245 6.8E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Gene3D G3DSA:1.20.120.1810 22 123 6.8E-28 T 12-10-2018 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 SUPERFAMILY SSF88946 15 123 2.09E-39 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Gene3D G3DSA:1.20.140.160 140 283 3.9E-13 T 12-10-2018 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 54.249 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 280 1.3E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 SUPERFAMILY SSF88659 197 282 3.18E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_0452 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Pfam PF04545 Sigma-70, region 4 229 279 1.1E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PA257_5965 ce5f7bd183423ba8220c86e54aeb7792 233 SUPERFAMILY SSF51351 4 230 1.2E-77 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5965 ce5f7bd183423ba8220c86e54aeb7792 233 ProSitePatterns PS00171 Triosephosphate isomerase active site. 147 157 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5965 ce5f7bd183423ba8220c86e54aeb7792 233 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 230 50.912 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5965 ce5f7bd183423ba8220c86e54aeb7792 233 Gene3D G3DSA:3.20.20.70 1 233 1.9E-80 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_5965 ce5f7bd183423ba8220c86e54aeb7792 233 Pfam PF00121 Triosephosphate isomerase 3 228 4.3E-75 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5965 ce5f7bd183423ba8220c86e54aeb7792 233 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 9 222 7.7E-61 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_3002 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 14 274 45.299 T 12-10-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 PA257_3002 41cfd6ad7948b94dc2aca7ab5ff1d681 275 SUPERFAMILY SSF53335 28 266 1.19E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3002 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Gene3D G3DSA:1.10.150.290 144 254 1.1E-67 T 12-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 PA257_3002 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Gene3D G3DSA:3.40.50.150 21 271 1.1E-67 T 12-10-2018 PA257_3002 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Pfam PF13649 Methyltransferase domain 47 136 2.3E-10 T 12-10-2018 PA257_6943 86dbde10d0b39c53a193a2df1f8b6270 397 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 157 375 1.6E-45 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PA257_6943 86dbde10d0b39c53a193a2df1f8b6270 397 SMART SM00646 217 375 1.2E-66 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PA257_6943 86dbde10d0b39c53a193a2df1f8b6270 397 Pfam PF11741 AMIN domain 32 129 5.7E-18 T 12-10-2018 IPR021731 AMIN domain PA257_6943 86dbde10d0b39c53a193a2df1f8b6270 397 SUPERFAMILY SSF53187 155 379 1.35E-51 T 12-10-2018 PA257_6943 86dbde10d0b39c53a193a2df1f8b6270 397 Gene3D G3DSA:2.60.40.3500 17 132 2.3E-25 T 12-10-2018 PA257_6943 86dbde10d0b39c53a193a2df1f8b6270 397 Gene3D G3DSA:3.40.630.40 147 384 2.0E-71 T 12-10-2018 PA257_5812 05e6d2d6b57c870476b7753c857be03d 487 Pfam PF00324 Amino acid permease 20 476 4.6E-138 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_5812 05e6d2d6b57c870476b7753c857be03d 487 Gene3D G3DSA:1.20.1740.10 11 482 2.3E-61 T 12-10-2018 PA257_5812 05e6d2d6b57c870476b7753c857be03d 487 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PA257_5812 05e6d2d6b57c870476b7753c857be03d 487 PIRSF PIRSF006060 2 484 6.0E-80 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 SUPERFAMILY SSF57884 10 97 6.67E-29 T 12-10-2018 IPR035451 Ada-like domain superfamily PA257_3618 d376f46e20cb150b01635df9e31268e3 358 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 276 355 4.6E-34 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 Pfam PF02805 Metal binding domain of Ada 16 77 8.9E-30 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 SMART SM00342 105 188 4.3E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 PIRSF PIRSF000409 2 358 9.9E-142 T 12-10-2018 IPR016221 Bifunctional regulatory protein Ada PA257_3618 d376f46e20cb150b01635df9e31268e3 358 Gene3D G3DSA:1.10.10.10 275 358 5.0E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3618 d376f46e20cb150b01635df9e31268e3 358 SUPERFAMILY SSF53155 196 274 1.37E-21 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 Gene3D G3DSA:1.10.10.60 84 141 2.6E-25 T 12-10-2018 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 Pfam PF12833 Helix-turn-helix domain 111 189 7.3E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 Gene3D G3DSA:3.30.160.70 187 274 3.4E-32 T 12-10-2018 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 SUPERFAMILY SSF46689 90 137 2.69E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 SUPERFAMILY SSF46767 275 356 1.19E-30 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 277 356 1.5E-32 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 Gene3D G3DSA:3.40.10.10 8 81 2.8E-29 T 12-10-2018 IPR035451 Ada-like domain superfamily PA257_3618 d376f46e20cb150b01635df9e31268e3 358 Gene3D G3DSA:1.10.10.60 142 186 2.2E-7 T 12-10-2018 PA257_3618 d376f46e20cb150b01635df9e31268e3 358 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 326 332 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 Gene3D G3DSA:3.10.20.30 1 80 3.6E-12 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 215 6.4E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 122 134 6.4E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 221 230 6.4E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 284 292 6.4E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 138 145 6.4E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 SUPERFAMILY SSF63380 92 186 8.9E-14 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 SUPERFAMILY SSF52343 192 317 5.11E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 Pfam PF00175 Oxidoreductase NAD-binding domain 197 297 4.6E-12 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 68 2.8E-7 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 SUPERFAMILY SSF54292 3 79 5.12E-16 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 Gene3D G3DSA:3.40.50.80 191 319 2.0E-25 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_6589 d0775a27f9567cd79d1d968540a0ccb2 322 Gene3D G3DSA:2.40.30.10 92 187 1.6E-14 T 12-10-2018 PA257_3106 21128cb03308053bab56ab33f50c584d 172 Gene3D G3DSA:1.10.1740.10 5 79 9.8E-11 T 12-10-2018 PA257_3106 21128cb03308053bab56ab33f50c584d 172 SUPERFAMILY SSF88659 91 165 8.41E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_3106 21128cb03308053bab56ab33f50c584d 172 SUPERFAMILY SSF88946 11 102 3.77E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3106 21128cb03308053bab56ab33f50c584d 172 Gene3D G3DSA:1.10.10.10 105 165 2.3E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3106 21128cb03308053bab56ab33f50c584d 172 Pfam PF08281 Sigma-70, region 4 113 165 1.0E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_3106 21128cb03308053bab56ab33f50c584d 172 Pfam PF04542 Sigma-70 region 2 17 81 7.9E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3106 21128cb03308053bab56ab33f50c584d 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 162 1.0E-20 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_3677 3f831da70fed69da57c13e8d267bdf2e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3677 3f831da70fed69da57c13e8d267bdf2e 300 SUPERFAMILY SSF53850 89 292 5.61E-38 T 12-10-2018 PA257_3677 3f831da70fed69da57c13e8d267bdf2e 300 Gene3D G3DSA:1.10.10.10 1 88 1.8E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3677 3f831da70fed69da57c13e8d267bdf2e 300 SUPERFAMILY SSF46785 1 111 3.97E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3677 3f831da70fed69da57c13e8d267bdf2e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3677 3f831da70fed69da57c13e8d267bdf2e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3677 3f831da70fed69da57c13e8d267bdf2e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3677 3f831da70fed69da57c13e8d267bdf2e 300 Gene3D G3DSA:3.40.190.10 90 286 2.6E-55 T 12-10-2018 PA257_3677 3f831da70fed69da57c13e8d267bdf2e 300 Pfam PF03466 LysR substrate binding domain 89 291 5.1E-35 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3677 3f831da70fed69da57c13e8d267bdf2e 300 Gene3D G3DSA:3.40.190.10 162 264 2.6E-55 T 12-10-2018 PA257_6282 0444daf4aac4ef3849dc366fcd077a47 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 394 1.8E-40 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_6282 0444daf4aac4ef3849dc366fcd077a47 402 Gene3D G3DSA:2.40.110.10 130 247 3.8E-37 T 12-10-2018 PA257_6282 0444daf4aac4ef3849dc366fcd077a47 402 SUPERFAMILY SSF47203 241 396 7.09E-37 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_6282 0444daf4aac4ef3849dc366fcd077a47 402 SUPERFAMILY SSF56645 8 254 4.19E-47 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_6282 0444daf4aac4ef3849dc366fcd077a47 402 Gene3D G3DSA:1.20.140.10 248 400 1.6E-35 T 12-10-2018 PA257_6282 0444daf4aac4ef3849dc366fcd077a47 402 Gene3D G3DSA:1.10.540.10 1 128 7.1E-7 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_6282 0444daf4aac4ef3849dc366fcd077a47 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 1.9E-23 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_6189 5a148be6e30b256d65ebbb73ad16adce 290 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 262 283 1.1E-8 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PA257_6189 5a148be6e30b256d65ebbb73ad16adce 290 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6189 5a148be6e30b256d65ebbb73ad16adce 290 SMART SM00382 30 261 8.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6189 5a148be6e30b256d65ebbb73ad16adce 290 Pfam PF00005 ABC transporter 21 211 7.0E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6189 5a148be6e30b256d65ebbb73ad16adce 290 SUPERFAMILY SSF52540 4 283 5.65E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0237 00d2407e804d92763d7a9380b9ecdf1f 268 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 268 6.8E-101 T 12-10-2018 PA257_0237 00d2407e804d92763d7a9380b9ecdf1f 268 SUPERFAMILY SSF52096 26 244 1.74E-18 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_0237 00d2407e804d92763d7a9380b9ecdf1f 268 Gene3D G3DSA:3.90.226.10 13 242 6.0E-21 T 12-10-2018 PA257_0237 00d2407e804d92763d7a9380b9ecdf1f 268 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 9 268 2.1E-99 T 12-10-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 PA257_6455 2f3f3cf30cb9e7ba379fd0ceb74ba236 492 Gene3D G3DSA:1.20.1600.10 63 475 1.3E-111 T 12-10-2018 PA257_6455 2f3f3cf30cb9e7ba379fd0ceb74ba236 492 Gene3D G3DSA:2.20.200.10 110 363 1.3E-111 T 12-10-2018 PA257_6455 2f3f3cf30cb9e7ba379fd0ceb74ba236 492 SUPERFAMILY SSF56954 9 478 6.41E-96 T 12-10-2018 PA257_6455 2f3f3cf30cb9e7ba379fd0ceb74ba236 492 Pfam PF02321 Outer membrane efflux protein 296 472 3.8E-18 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_6455 2f3f3cf30cb9e7ba379fd0ceb74ba236 492 Pfam PF02321 Outer membrane efflux protein 73 263 7.3E-23 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_6455 2f3f3cf30cb9e7ba379fd0ceb74ba236 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 474 7.8E-125 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 2 564 70.352 T 12-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 SMART SM00919 269 530 5.8E-129 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 Gene3D G3DSA:3.40.50.10380 13 266 2.6E-112 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 145 174 2.9E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 181 203 2.9E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 85 109 2.9E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 265 281 2.9E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 296 312 2.9E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 240 258 2.9E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 407 423 2.9E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 SMART SM01274 79 259 9.1E-105 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 SUPERFAMILY SSF51735 269 561 9.67E-93 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1798 6ae31b45fabf571683323091cca71ecd 564 Gene3D G3DSA:3.40.50.720 267 564 1.3E-107 T 12-10-2018 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 SUPERFAMILY SSF53223 5 268 7.19E-107 T 12-10-2018 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 Pfam PF03949 Malic enzyme, NAD binding domain 269 529 9.4E-104 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 Pfam PF00390 Malic enzyme, N-terminal domain 79 259 3.5E-77 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 PIRSF PIRSF000106 1 562 3.1E-220 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PA257_1798 6ae31b45fabf571683323091cca71ecd 564 ProSitePatterns PS00331 Malic enzymes signature. 265 281 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PA257_1600 44cb5f54294b451693acde72a0a29904 107 Pfam PF00037 4Fe-4S binding domain 34 55 4.7E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_1600 44cb5f54294b451693acde72a0a29904 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.4E-18 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PA257_1600 44cb5f54294b451693acde72a0a29904 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.4E-18 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PA257_1600 44cb5f54294b451693acde72a0a29904 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.4E-18 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PA257_1600 44cb5f54294b451693acde72a0a29904 107 SUPERFAMILY SSF54862 3 104 1.2E-24 T 12-10-2018 PA257_1600 44cb5f54294b451693acde72a0a29904 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_1600 44cb5f54294b451693acde72a0a29904 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 9.1E-24 T 12-10-2018 IPR022569 Ferredoxin, C-terminal PA257_1600 44cb5f54294b451693acde72a0a29904 107 Gene3D G3DSA:3.30.70.20 2 99 6.5E-32 T 12-10-2018 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 SMART SM00359 281 364 3.2E-16 T 12-10-2018 IPR002478 PUA domain GO:0003723 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 Pfam PF01472 PUA domain 281 354 9.8E-23 T 12-10-2018 IPR002478 PUA domain GO:0003723 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 370 6.0E-130 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 Gene3D G3DSA:2.30.130.10 270 372 3.5E-33 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 SUPERFAMILY SSF53633 9 261 6.41E-69 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 5.2E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 5.2E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 5.2E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 5.2E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 5.2E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 PIRSF PIRSF000729 4 372 1.1E-129 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 SUPERFAMILY SSF88697 280 371 1.6E-24 T 12-10-2018 IPR015947 PUA-like superfamily PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 263 37.347 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 Gene3D G3DSA:3.40.1160.10 1 269 4.2E-90 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_5741 1409803a3405e07fa3f066efc2ae5149 372 Pfam PF00696 Amino acid kinase family 10 238 5.5E-47 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PA257_4081 bd5ef1571d2e73c778154d8771e3343d 219 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 6.4E-92 T 12-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 PA257_4081 bd5ef1571d2e73c778154d8771e3343d 219 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4081 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 5.7E-69 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4081 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 5.7E-69 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4081 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 5.7E-69 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4081 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 5.7E-69 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4081 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 5.7E-69 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4081 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 5.7E-69 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4081 bd5ef1571d2e73c778154d8771e3343d 219 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4081 bd5ef1571d2e73c778154d8771e3343d 219 Pfam PF00813 FliP family 14 211 2.1E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PA257_4637 03530e8e0868bf15ef66c10531903bed 244 Pfam PF03741 Integral membrane protein TerC family 16 186 3.1E-44 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 PA257_4637 03530e8e0868bf15ef66c10531903bed 244 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 13 187 2.0E-70 T 12-10-2018 IPR022301 Integral membrane protein YjbE PA257_4447 e51d2c4a969789a68362181121bc78b9 521 Gene3D G3DSA:3.90.100.10 384 504 4.0E-31 T 12-10-2018 PA257_4447 e51d2c4a969789a68362181121bc78b9 521 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 262 336 1.1E-15 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 PA257_4447 e51d2c4a969789a68362181121bc78b9 521 Gene3D G3DSA:3.90.1150.10 218 383 7.9E-44 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_4447 e51d2c4a969789a68362181121bc78b9 521 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 31 142 5.4E-7 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 PA257_4447 e51d2c4a969789a68362181121bc78b9 521 SUPERFAMILY SSF55904 359 502 1.18E-23 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 PA257_4447 e51d2c4a969789a68362181121bc78b9 521 SUPERFAMILY SSF53383 241 356 1.11E-12 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_4447 e51d2c4a969789a68362181121bc78b9 521 Gene3D G3DSA:3.40.50.2300 16 147 9.8E-6 T 12-10-2018 PA257_4447 e51d2c4a969789a68362181121bc78b9 521 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 364 493 2.2E-33 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 214 1.5E-77 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 Hamap MF_00235 Adenylate kinase [adk]. 1 215 53.753 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 81 97 5.1E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 4 17 5.1E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 32 46 5.1E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 156 171 5.1E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 173 187 5.1E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 Gene3D G3DSA:3.40.50.300 1 215 3.6E-78 T 12-10-2018 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 SUPERFAMILY SSF52540 1 212 1.01E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.2E-16 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 PA257_1535 f0dc0c5191739deb9736065f8027b3d9 215 Pfam PF00406 Adenylate kinase 5 185 1.3E-56 T 12-10-2018 PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 Pfam PF01595 Domain of unknown function DUF21 12 165 2.2E-37 T 12-10-2018 IPR002550 CNNM, transmembrane domain PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 SMART SM00116 213 262 7.2 T 12-10-2018 IPR000644 CBS domain PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 SMART SM00116 277 325 1.2 T 12-10-2018 IPR000644 CBS domain PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 Pfam PF00571 CBS domain 216 261 3.7E-4 T 12-10-2018 IPR000644 CBS domain PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 Pfam PF00571 CBS domain 277 325 2.1E-7 T 12-10-2018 IPR000644 CBS domain PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 SMART SM01091 340 418 3.4E-18 T 12-10-2018 IPR005170 Transporter-associated domain PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 Gene3D G3DSA:3.10.580.10 186 340 1.0E-44 T 12-10-2018 PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 SUPERFAMILY SSF54631 192 328 1.17E-28 T 12-10-2018 PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 Pfam PF03471 Transporter associated domain 341 414 9.8E-15 T 12-10-2018 IPR005170 Transporter-associated domain PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 SUPERFAMILY SSF56176 337 418 4.91E-18 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_1470 a4c0d405a8aae55f83e43dfb299e7560 430 Gene3D G3DSA:3.30.465.10 341 415 8.1E-24 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_0797 df70c60c3307e1af4a1003c23d5a6760 344 Gene3D G3DSA:3.30.360.10 148 312 7.8E-128 T 12-10-2018 PA257_0797 df70c60c3307e1af4a1003c23d5a6760 344 SUPERFAMILY SSF51735 2 172 1.74E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0797 df70c60c3307e1af4a1003c23d5a6760 344 SUPERFAMILY SSF55347 150 312 2.88E-51 T 12-10-2018 PA257_0797 df70c60c3307e1af4a1003c23d5a6760 344 SMART SM00859 3 142 8.1E-64 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PA257_0797 df70c60c3307e1af4a1003c23d5a6760 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 159 315 5.1E-16 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PA257_0797 df70c60c3307e1af4a1003c23d5a6760 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 145 161 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PA257_0797 df70c60c3307e1af4a1003c23d5a6760 344 Gene3D G3DSA:3.40.50.720 3 330 7.8E-128 T 12-10-2018 PA257_0797 df70c60c3307e1af4a1003c23d5a6760 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 338 43.516 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PA257_0797 df70c60c3307e1af4a1003c23d5a6760 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 344 7.2E-132 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PA257_0797 df70c60c3307e1af4a1003c23d5a6760 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 142 3.8E-38 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 476 1.9E-26 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:3.40.1380.20 340 474 3.5E-159 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 298 316 2.9E-49 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 273 297 2.9E-49 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 221 247 2.9E-49 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 248 272 2.9E-49 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 61 77 2.9E-49 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 317 333 2.9E-49 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 188 202 2.9E-49 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 Pfam PF00224 Pyruvate kinase, barrel domain 4 342 1.6E-122 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF50800 72 165 4.36E-25 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PA257_5393 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF52935 327 479 5.36E-36 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF51621 2 343 6.63E-92 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 4 478 3.6E-159 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:3.20.20.60 4 339 3.5E-159 T 12-10-2018 PA257_5393 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:2.40.33.10 72 170 3.5E-159 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_3095 c053b38d1f115f3328baab9f35400217 226 Gene3D G3DSA:1.10.10.10 123 218 2.4E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3095 c053b38d1f115f3328baab9f35400217 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 6.8E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_3095 c053b38d1f115f3328baab9f35400217 226 SUPERFAMILY SSF52172 1 172 1.66E-34 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3095 c053b38d1f115f3328baab9f35400217 226 SMART SM00862 145 216 3.1E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_3095 c053b38d1f115f3328baab9f35400217 226 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3095 c053b38d1f115f3328baab9f35400217 226 SMART SM00448 1 112 2.1E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3095 c053b38d1f115f3328baab9f35400217 226 Gene3D G3DSA:3.40.50.2300 1 121 2.5E-35 T 12-10-2018 PA257_6804 f44971580c6d362425835051e79360cf 186 Pfam PF03729 Short repeat of unknown function (DUF308) 133 181 1.8E-6 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane PA257_6804 f44971580c6d362425835051e79360cf 186 Pfam PF03729 Short repeat of unknown function (DUF308) 76 146 6.1E-15 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane PA257_6804 f44971580c6d362425835051e79360cf 186 Pfam PF03729 Short repeat of unknown function (DUF308) 19 86 1.2E-11 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane PA257_1341 d68bb3ef5052dcb032613ea7a89a95c1 526 Pfam PF12792 CSS motif domain associated with EAL 42 232 4.7E-41 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PA257_1341 d68bb3ef5052dcb032613ea7a89a95c1 526 Gene3D G3DSA:3.20.20.450 256 517 1.5E-86 T 12-10-2018 IPR035919 EAL domain superfamily PA257_1341 d68bb3ef5052dcb032613ea7a89a95c1 526 Pfam PF00563 EAL domain 263 498 1.2E-67 T 12-10-2018 IPR001633 EAL domain PA257_1341 d68bb3ef5052dcb032613ea7a89a95c1 526 SUPERFAMILY SSF141868 263 507 2.88E-77 T 12-10-2018 IPR035919 EAL domain superfamily PA257_1341 d68bb3ef5052dcb032613ea7a89a95c1 526 SMART SM00052 257 503 1.1E-97 T 12-10-2018 IPR001633 EAL domain PA257_4094 9d408bffe2a7c901e1f4e36aa3c957f1 363 SUPERFAMILY SSF103263 4 354 2.49E-148 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PA257_4094 9d408bffe2a7c901e1f4e36aa3c957f1 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PA257_4094 9d408bffe2a7c901e1f4e36aa3c957f1 363 Hamap MF_00300 Chorismate synthase [aroC]. 10 351 37.167 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PA257_4094 9d408bffe2a7c901e1f4e36aa3c957f1 363 Pfam PF01264 Chorismate synthase 10 344 2.9E-139 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PA257_4094 9d408bffe2a7c901e1f4e36aa3c957f1 363 PIRSF PIRSF001456 3 359 8.8E-140 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PA257_4094 9d408bffe2a7c901e1f4e36aa3c957f1 363 Gene3D G3DSA:3.60.150.10 1 361 2.9E-153 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PA257_4094 9d408bffe2a7c901e1f4e36aa3c957f1 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 318 334 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PA257_4094 9d408bffe2a7c901e1f4e36aa3c957f1 363 TIGRFAM TIGR00033 aroC: chorismate synthase 10 349 2.6E-140 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PA257_4094 9d408bffe2a7c901e1f4e36aa3c957f1 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 Gene3D G3DSA:3.40.50.720 1 250 2.5E-73 T 12-10-2018 PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.3E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.3E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.3E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.1E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 SUPERFAMILY SSF51735 5 250 6.86E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 186 3.0E-4 T 12-10-2018 PA257_6923 8eed48be68580a7c938f442e7c783aa1 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 249 6.0E-59 T 12-10-2018 PA257_5369 2766047f521b83bc11e5abd356762c09 496 Gene3D G3DSA:3.40.50.300 206 385 1.3E-18 T 12-10-2018 PA257_5369 2766047f521b83bc11e5abd356762c09 496 SUPERFAMILY SSF52540 7 386 1.67E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5369 2766047f521b83bc11e5abd356762c09 496 SMART SM00382 25 331 5.9E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5369 2766047f521b83bc11e5abd356762c09 496 Gene3D G3DSA:3.40.50.300 12 141 4.3E-10 T 12-10-2018 PA257_5369 2766047f521b83bc11e5abd356762c09 496 Pfam PF05872 Bacterial protein of unknown function (DUF853) 9 495 1.8E-227 T 12-10-2018 IPR033186 Helicase HerA-like C-terminal PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 198 9.0E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 SUPERFAMILY SSF46894 142 204 2.15E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 SMART SM00421 141 198 2.1E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 Pfam PF00072 Response regulator receiver domain 1 110 1.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 SUPERFAMILY SSF52172 1 160 4.98E-31 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 SMART SM00448 1 111 1.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 Gene3D G3DSA:3.40.50.12740 1 204 3.0E-55 T 12-10-2018 PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 1.5E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 1.5E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0044 18cc972e6a899d0a5d398b46398ef372 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 1.5E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_6060 9c8902f60f20c161ef48ec009f465fae 285 SUPERFAMILY SSF54637 174 260 2.01E-18 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6060 9c8902f60f20c161ef48ec009f465fae 285 Gene3D G3DSA:3.10.129.10 34 281 2.3E-66 T 12-10-2018 PA257_6060 9c8902f60f20c161ef48ec009f465fae 285 PRINTS PR01483 Fatty acid synthase signature 181 203 6.8E-5 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PA257_6060 9c8902f60f20c161ef48ec009f465fae 285 PRINTS PR01483 Fatty acid synthase signature 203 224 6.8E-5 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PA257_6060 9c8902f60f20c161ef48ec009f465fae 285 SUPERFAMILY SSF54637 43 153 4.85E-6 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6060 9c8902f60f20c161ef48ec009f465fae 285 Pfam PF01575 MaoC like domain 180 254 1.8E-12 T 12-10-2018 IPR002539 MaoC-like dehydratase domain PA257_3446 fdbcacfd96d5bdd8168073d9fe7c5c21 393 Gene3D G3DSA:3.40.50.300 3 178 9.2E-41 T 12-10-2018 PA257_3446 fdbcacfd96d5bdd8168073d9fe7c5c21 393 Pfam PF05707 Zonular occludens toxin (Zot) 1 179 3.3E-19 T 12-10-2018 IPR008900 Zona occludens toxin PA257_3436 fdbcacfd96d5bdd8168073d9fe7c5c21 393 Gene3D G3DSA:3.40.50.300 3 178 9.2E-41 T 12-10-2018 PA257_3436 fdbcacfd96d5bdd8168073d9fe7c5c21 393 Pfam PF05707 Zonular occludens toxin (Zot) 1 179 3.3E-19 T 12-10-2018 IPR008900 Zona occludens toxin PA257_3464 fdbcacfd96d5bdd8168073d9fe7c5c21 393 Gene3D G3DSA:3.40.50.300 3 178 9.2E-41 T 12-10-2018 PA257_3464 fdbcacfd96d5bdd8168073d9fe7c5c21 393 Pfam PF05707 Zonular occludens toxin (Zot) 1 179 3.3E-19 T 12-10-2018 IPR008900 Zona occludens toxin PA257_3455 fdbcacfd96d5bdd8168073d9fe7c5c21 393 Gene3D G3DSA:3.40.50.300 3 178 9.2E-41 T 12-10-2018 PA257_3455 fdbcacfd96d5bdd8168073d9fe7c5c21 393 Pfam PF05707 Zonular occludens toxin (Zot) 1 179 3.3E-19 T 12-10-2018 IPR008900 Zona occludens toxin PA257_4511 42cccd4a09788b80d4dfeb858ad7708c 184 PIRSF PIRSF000303 1 184 2.8E-56 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_4511 42cccd4a09788b80d4dfeb858ad7708c 184 Gene3D G3DSA:3.40.30.10 25 184 2.7E-43 T 12-10-2018 PA257_4511 42cccd4a09788b80d4dfeb858ad7708c 184 PRINTS PR01011 Glutathione peroxidase family signature 142 151 2.9E-9 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_4511 42cccd4a09788b80d4dfeb858ad7708c 184 PRINTS PR01011 Glutathione peroxidase family signature 47 64 2.9E-9 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_4511 42cccd4a09788b80d4dfeb858ad7708c 184 PRINTS PR01011 Glutathione peroxidase family signature 82 98 2.9E-9 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_4511 42cccd4a09788b80d4dfeb858ad7708c 184 SUPERFAMILY SSF52833 34 180 2.32E-42 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4511 42cccd4a09788b80d4dfeb858ad7708c 184 Pfam PF00255 Glutathione peroxidase 39 134 1.7E-22 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_4511 42cccd4a09788b80d4dfeb858ad7708c 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 49 64 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 Pfam PF13188 PAS domain 173 222 5.6E-5 T 12-10-2018 IPR000014 PAS domain PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 SUPERFAMILY SSF55785 167 275 8.38E-6 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 Gene3D G3DSA:1.20.120.1530 1 156 1.2E-60 T 12-10-2018 PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 601 3.1E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 SUPERFAMILY SSF58104 353 634 1.29E-73 T 12-10-2018 PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 SMART SM00283 386 633 1.2E-90 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 Gene3D G3DSA:3.30.450.20 170 289 1.3E-43 T 12-10-2018 PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 Gene3D G3DSA:1.10.287.950 334 635 1.0E-87 T 12-10-2018 PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 561 590 4.1E-56 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 513 542 4.1E-56 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 484 511 4.1E-56 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_0203 8bdfe72522470224e597eeb53ff9a78e 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 4.1E-56 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_6934 91f9a20996169069c9a8e0f22bba9551 435 Gene3D G3DSA:1.20.1250.20 19 435 1.2E-71 T 12-10-2018 PA257_6934 91f9a20996169069c9a8e0f22bba9551 435 SUPERFAMILY SSF103473 21 430 4.58E-70 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6934 91f9a20996169069c9a8e0f22bba9551 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 299 316 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_6934 91f9a20996169069c9a8e0f22bba9551 435 Pfam PF07690 Major Facilitator Superfamily 58 376 1.0E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6934 91f9a20996169069c9a8e0f22bba9551 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_6934 91f9a20996169069c9a8e0f22bba9551 435 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 29 415 4.4E-135 T 12-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 PA257_6717 61ecc2e2d71d6dc55c508a0e12af242d 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 3.0E-58 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PA257_6717 61ecc2e2d71d6dc55c508a0e12af242d 259 SUPERFAMILY SSF56219 1 254 2.49E-53 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_6717 61ecc2e2d71d6dc55c508a0e12af242d 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 233 2.2E-11 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PA257_6717 61ecc2e2d71d6dc55c508a0e12af242d 259 Gene3D G3DSA:3.60.10.10 1 259 4.2E-66 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_0785 7c0bb481fd65a00b1a42ebd420899cac 349 SUPERFAMILY SSF47648 1 67 2.88E-21 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PA257_0785 7c0bb481fd65a00b1a42ebd420899cac 349 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 338 4.0E-121 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 PA257_0785 7c0bb481fd65a00b1a42ebd420899cac 349 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 38.441 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 PA257_0785 7c0bb481fd65a00b1a42ebd420899cac 349 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 64 4.0E-19 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 PA257_0785 7c0bb481fd65a00b1a42ebd420899cac 349 Gene3D G3DSA:3.40.1030.10 73 347 3.7E-100 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PA257_0785 7c0bb481fd65a00b1a42ebd420899cac 349 Gene3D G3DSA:1.20.970.10 1 70 8.4E-28 T 12-10-2018 PA257_0785 7c0bb481fd65a00b1a42ebd420899cac 349 SUPERFAMILY SSF52418 75 340 1.57E-87 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PA257_0785 7c0bb481fd65a00b1a42ebd420899cac 349 Pfam PF00591 Glycosyl transferase family, a/b domain 75 329 9.5E-102 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PA257_5422 e33b687b4abb604e7f9b30e6e3decfb1 766 Gene3D G3DSA:3.40.50.300 2 170 1.3E-44 T 12-10-2018 PA257_5422 e33b687b4abb604e7f9b30e6e3decfb1 766 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 5.6E-22 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 PA257_5422 e33b687b4abb604e7f9b30e6e3decfb1 766 SUPERFAMILY SSF52540 4 167 8.76E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5422 e33b687b4abb604e7f9b30e6e3decfb1 766 Pfam PF02421 Ferrous iron transport protein B 6 163 8.0E-63 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 PA257_5422 e33b687b4abb604e7f9b30e6e3decfb1 766 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 685 5.2E-210 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PA257_5422 e33b687b4abb604e7f9b30e6e3decfb1 766 Pfam PF07670 Nucleoside recognition 349 442 2.1E-13 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PA257_5422 e33b687b4abb604e7f9b30e6e3decfb1 766 Pfam PF07670 Nucleoside recognition 509 687 2.3E-36 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PA257_3943 0441252c6acfccaa254d1dc117920e11 246 Gene3D G3DSA:3.30.420.10 1 183 1.1E-56 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_3943 0441252c6acfccaa254d1dc117920e11 246 Pfam PF00929 Exonuclease 4 167 7.2E-39 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_3943 0441252c6acfccaa254d1dc117920e11 246 SUPERFAMILY SSF53098 1 177 2.64E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_3943 0441252c6acfccaa254d1dc117920e11 246 SMART SM00479 2 176 1.2E-49 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_3943 0441252c6acfccaa254d1dc117920e11 246 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 178 1.4E-64 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_3943 0441252c6acfccaa254d1dc117920e11 246 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 238 1.1E-88 T 12-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 Gene3D G3DSA:1.10.287.130 164 283 2.1E-21 T 12-10-2018 PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 8.8E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 8.8E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 8.8E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 8.8E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 Gene3D G3DSA:3.30.565.10 291 440 8.5E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 437 1.3E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 SUPERFAMILY SSF47384 181 287 1.77E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 SMART SM00387 329 438 1.4E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 287 8.8E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2992 7f0d2b4721fdab4bfee09b70a57d243e 448 SUPERFAMILY SSF55874 278 438 4.32E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0271 2eac6ab972d29694572c4f8bc60cc4c8 284 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 6 281 27.241 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PA257_0271 2eac6ab972d29694572c4f8bc60cc4c8 284 Gene3D G3DSA:3.40.50.10860 11 271 8.0E-79 T 12-10-2018 PA257_0271 2eac6ab972d29694572c4f8bc60cc4c8 284 SUPERFAMILY SSF51735 111 279 1.63E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0271 2eac6ab972d29694572c4f8bc60cc4c8 284 SUPERFAMILY SSF53223 6 110 5.76E-27 T 12-10-2018 PA257_0271 2eac6ab972d29694572c4f8bc60cc4c8 284 Gene3D G3DSA:3.40.50.720 109 249 8.0E-79 T 12-10-2018 PA257_0271 2eac6ab972d29694572c4f8bc60cc4c8 284 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 98 8.4E-22 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PA257_4061 afb405577b63b4ca83abfec3e80382be 278 Gene3D G3DSA:2.60.120.10 8 83 1.5E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4061 afb405577b63b4ca83abfec3e80382be 278 SMART SM00342 184 267 4.1E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4061 afb405577b63b4ca83abfec3e80382be 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_4061 afb405577b63b4ca83abfec3e80382be 278 SUPERFAMILY SSF46689 167 217 3.76E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4061 afb405577b63b4ca83abfec3e80382be 278 Pfam PF12833 Helix-turn-helix domain 191 268 3.6E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4061 afb405577b63b4ca83abfec3e80382be 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 9.9E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4061 afb405577b63b4ca83abfec3e80382be 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 9.9E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4061 afb405577b63b4ca83abfec3e80382be 278 SUPERFAMILY SSF46689 220 269 4.21E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4061 afb405577b63b4ca83abfec3e80382be 278 Gene3D G3DSA:1.10.10.60 163 277 5.5E-28 T 12-10-2018 PA257_6078 33824329db91ae54f5b073f2a2136c7d 272 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 220 4.8E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_6078 33824329db91ae54f5b073f2a2136c7d 272 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 236 248 4.8E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_6078 33824329db91ae54f5b073f2a2136c7d 272 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 220 236 4.8E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_6078 33824329db91ae54f5b073f2a2136c7d 272 SUPERFAMILY SSF46894 202 262 4.08E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_6078 33824329db91ae54f5b073f2a2136c7d 272 Pfam PF00196 Bacterial regulatory proteins, luxR family 205 258 3.0E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_6078 33824329db91ae54f5b073f2a2136c7d 272 SMART SM00421 203 260 1.1E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_6078 33824329db91ae54f5b073f2a2136c7d 272 Gene3D G3DSA:1.10.10.10 149 269 1.6E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 SUPERFAMILY SSF51246 338 457 1.05E-29 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Pfam PF00364 Biotin-requiring enzyme 493 555 3.9E-12 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Gene3D G3DSA:3.30.1490.20 133 204 8.7E-21 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 112 4.2E-39 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Gene3D G3DSA:3.40.50.20 6 132 4.8E-47 T 12-10-2018 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Gene3D G3DSA:3.30.470.20 206 462 1.5E-91 T 12-10-2018 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 SUPERFAMILY SSF52096 581 837 6.97E-48 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 SUPERFAMILY SSF52440 4 114 1.65E-38 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 SUPERFAMILY SSF56059 85 334 1.77E-56 T 12-10-2018 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 SUPERFAMILY SSF52096 842 1081 5.68E-66 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Gene3D G3DSA:2.40.50.100 492 560 3.8E-17 T 12-10-2018 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Gene3D G3DSA:3.90.226.10 574 834 5.6E-67 T 12-10-2018 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Pfam PF02785 Biotin carboxylase C-terminal domain 343 451 2.4E-28 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 SMART SM00878 343 451 4.3E-45 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 327 1.1E-57 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Pfam PF01039 Carboxyl transferase domain 605 1077 8.4E-70 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 SUPERFAMILY SSF51230 486 558 1.44E-15 T 12-10-2018 IPR011053 Single hybrid motif PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 514 531 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_4395 e26b600792a735e6d808fb9f7a2b9180 1095 Gene3D G3DSA:3.90.226.10 842 1095 3.7E-74 T 12-10-2018 PA257_4004 085d67ee6e1b19f09bdbedd3dbda1db4 179 Gene3D G3DSA:2.40.70.10 24 159 5.1E-44 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_4004 085d67ee6e1b19f09bdbedd3dbda1db4 179 SUPERFAMILY SSF50630 27 165 6.35E-40 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_4004 085d67ee6e1b19f09bdbedd3dbda1db4 179 Pfam PF05618 Putative ATP-dependant zinc protease 27 168 2.9E-51 T 12-10-2018 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.2E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 5.2E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 5.2E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 5.2E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 79.575 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 6.7E-46 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 Gene3D G3DSA:3.40.50.1370 134 295 7.5E-111 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 SUPERFAMILY SSF53671 2 300 1.07E-103 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 Gene3D G3DSA:3.40.50.1370 4 133 7.5E-111 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 5.3E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 5.3E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 5.3E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 5.3E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 5.3E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 299 3.9E-116 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_1746 acd0dad31c2287b8f44f8171641f1e87 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 297 8.3E-50 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 PRINTS PR01415 Ankyrin repeat signature 167 181 8.1E-7 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 PRINTS PR01415 Ankyrin repeat signature 114 129 8.1E-7 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 SUPERFAMILY SSF48403 18 209 4.66E-47 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 Pfam PF12796 Ankyrin repeats (3 copies) 89 182 1.2E-12 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 Pfam PF12796 Ankyrin repeats (3 copies) 17 78 1.9E-6 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 Gene3D G3DSA:1.25.40.20 14 210 1.8E-54 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 SMART SM00248 47 76 1.5E-4 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 SMART SM00248 146 180 0.7 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 SMART SM00248 80 109 1800.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 SMART SM00248 113 142 0.017 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_3075 23f977daeb2ef07ff3116f464e5dcb36 210 SMART SM00248 14 43 2300.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_3679 b94867d9b42bbf01c8fe988e455d6d30 295 SUPERFAMILY SSF46785 3 109 5.26E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3679 b94867d9b42bbf01c8fe988e455d6d30 295 Pfam PF03466 LysR substrate binding domain 88 284 4.0E-43 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3679 b94867d9b42bbf01c8fe988e455d6d30 295 SUPERFAMILY SSF53850 87 288 1.76E-40 T 12-10-2018 PA257_3679 b94867d9b42bbf01c8fe988e455d6d30 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3679 b94867d9b42bbf01c8fe988e455d6d30 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3679 b94867d9b42bbf01c8fe988e455d6d30 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3679 b94867d9b42bbf01c8fe988e455d6d30 295 Gene3D G3DSA:1.10.10.10 1 88 2.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3679 b94867d9b42bbf01c8fe988e455d6d30 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.5E-25 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3679 b94867d9b42bbf01c8fe988e455d6d30 295 Gene3D G3DSA:3.40.190.290 90 293 4.6E-53 T 12-10-2018 PA257_5947 8d35c8dda48ef0e779b679a433dbb081 645 Pfam PF00501 AMP-binding enzyme 82 519 2.8E-91 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_5947 8d35c8dda48ef0e779b679a433dbb081 645 Gene3D G3DSA:3.30.300.30 515 644 1.5E-28 T 12-10-2018 PA257_5947 8d35c8dda48ef0e779b679a433dbb081 645 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 80 1.1E-21 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 PA257_5947 8d35c8dda48ef0e779b679a433dbb081 645 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 642 54.0 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 PA257_5947 8d35c8dda48ef0e779b679a433dbb081 645 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_5947 8d35c8dda48ef0e779b679a433dbb081 645 Gene3D G3DSA:3.40.50.12780 53 512 3.2E-110 T 12-10-2018 PA257_5947 8d35c8dda48ef0e779b679a433dbb081 645 Pfam PF13193 AMP-binding enzyme C-terminal domain 528 606 3.8E-24 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_5947 8d35c8dda48ef0e779b679a433dbb081 645 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 640 0.0 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 PA257_5947 8d35c8dda48ef0e779b679a433dbb081 645 SUPERFAMILY SSF56801 11 637 2.09E-185 T 12-10-2018 PA257_2134 4b9d43da0e8142c53f50d6198c389c3d 363 Gene3D G3DSA:3.40.640.10 20 259 3.0E-93 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_2134 4b9d43da0e8142c53f50d6198c389c3d 363 Pfam PF00266 Aminotransferase class-V 8 351 2.0E-49 T 12-10-2018 IPR000192 Aminotransferase class V domain PA257_2134 4b9d43da0e8142c53f50d6198c389c3d 363 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 5 362 51.871 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 PA257_2134 4b9d43da0e8142c53f50d6198c389c3d 363 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 362 1.9E-166 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 PA257_2134 4b9d43da0e8142c53f50d6198c389c3d 363 SUPERFAMILY SSF53383 6 361 1.7E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_2134 4b9d43da0e8142c53f50d6198c389c3d 363 Gene3D G3DSA:3.90.1150.10 260 363 2.1E-43 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_2134 4b9d43da0e8142c53f50d6198c389c3d 363 PIRSF PIRSF000525 2 363 7.9E-151 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 PA257_5849 bb18f5e735d47a59dca39dc2ad1d6769 252 Gene3D G3DSA:3.40.50.720 2 251 1.7E-88 T 12-10-2018 PA257_5849 bb18f5e735d47a59dca39dc2ad1d6769 252 Pfam PF00899 ThiF family 10 243 1.5E-59 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PA257_5849 bb18f5e735d47a59dca39dc2ad1d6769 252 SUPERFAMILY SSF69572 2 247 6.02E-83 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 PA257_5532 582b2b9203a273c0ef1c57f386a8bee4 140 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 133 3.2E-34 T 12-10-2018 IPR002178 PTS EIIA type-2 domain PA257_5532 582b2b9203a273c0ef1c57f386a8bee4 140 Gene3D G3DSA:3.40.930.10 1 139 1.0E-47 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PA257_5532 582b2b9203a273c0ef1c57f386a8bee4 140 SUPERFAMILY SSF55804 2 133 7.85E-38 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PA257_5532 582b2b9203a273c0ef1c57f386a8bee4 140 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 135 4.4E-57 T 12-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 PA257_0892 3b54836b1fa5b9385a9b7d9c79339b7f 388 Gene3D G3DSA:2.130.10.10 18 386 1.7E-111 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_0892 3b54836b1fa5b9385a9b7d9c79339b7f 388 Pfam PF10282 Lactonase, 7-bladed beta-propeller 30 384 4.4E-114 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller PA257_0892 3b54836b1fa5b9385a9b7d9c79339b7f 388 SUPERFAMILY SSF50974 7 353 6.54E-51 T 12-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 PA257_3394 4e2fdfce35a971fe6aa0e9642cbbd978 481 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 431 1.2E-142 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3394 4e2fdfce35a971fe6aa0e9642cbbd978 481 Pfam PF01235 Sodium:alanine symporter family 50 444 6.1E-146 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3394 4e2fdfce35a971fe6aa0e9642cbbd978 481 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 84 99 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3394 4e2fdfce35a971fe6aa0e9642cbbd978 481 PRINTS PR00175 Sodium/alanine symporter signature 203 222 3.8E-47 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3394 4e2fdfce35a971fe6aa0e9642cbbd978 481 PRINTS PR00175 Sodium/alanine symporter signature 400 420 3.8E-47 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3394 4e2fdfce35a971fe6aa0e9642cbbd978 481 PRINTS PR00175 Sodium/alanine symporter signature 84 106 3.8E-47 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3394 4e2fdfce35a971fe6aa0e9642cbbd978 481 PRINTS PR00175 Sodium/alanine symporter signature 294 312 3.8E-47 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3394 4e2fdfce35a971fe6aa0e9642cbbd978 481 PRINTS PR00175 Sodium/alanine symporter signature 340 362 3.8E-47 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3394 4e2fdfce35a971fe6aa0e9642cbbd978 481 PRINTS PR00175 Sodium/alanine symporter signature 175 193 3.8E-47 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 SUPERFAMILY SSF69349 449 631 2.2E-40 T 12-10-2018 PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 511 1.8E-121 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 SUPERFAMILY SSF69279 191 371 1.34E-41 T 12-10-2018 PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 529 8.2E-202 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 Gene3D G3DSA:2.40.50.230 362 463 8.5E-43 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 SUPERFAMILY SSF69279 10 184 4.87E-57 T 12-10-2018 PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 Gene3D G3DSA:2.30.110.50 18 328 9.0E-87 T 12-10-2018 PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 SUPERFAMILY SSF69255 371 459 2.2E-32 T 12-10-2018 PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 Gene3D G3DSA:3.30.1920.30 221 284 9.0E-87 T 12-10-2018 PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 Pfam PF05954 Phage late control gene D protein (GPD) 29 327 9.3E-78 T 12-10-2018 PA257_1781 7afc63ebc21af59b4b90f93a04dac09b 808 Gene3D G3DSA:3.55.50.10 95 188 9.0E-87 T 12-10-2018 PA257_3562 1473bd5078049a2988ed78b17be72528 584 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 20 537 3.2E-196 T 12-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 PA257_3562 1473bd5078049a2988ed78b17be72528 584 SMART SM00642 115 496 5.6E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3562 1473bd5078049a2988ed78b17be72528 584 Pfam PF11941 Domain of unknown function (DUF3459) 488 577 2.6E-15 T 12-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) PA257_3562 1473bd5078049a2988ed78b17be72528 584 Gene3D G3DSA:1.10.10.760 429 473 2.8E-158 T 12-10-2018 PA257_3562 1473bd5078049a2988ed78b17be72528 584 Pfam PF00128 Alpha amylase, catalytic domain 134 211 2.1E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3562 1473bd5078049a2988ed78b17be72528 584 Gene3D G3DSA:2.60.40.10 4 99 2.2E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3562 1473bd5078049a2988ed78b17be72528 584 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 8 71 3.2E-7 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 PA257_3562 1473bd5078049a2988ed78b17be72528 584 PIRSF PIRSF006337 4 580 8.0E-226 T 12-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 PA257_3562 1473bd5078049a2988ed78b17be72528 584 Gene3D G3DSA:3.20.20.80 103 497 2.8E-158 T 12-10-2018 PA257_3562 1473bd5078049a2988ed78b17be72528 584 SUPERFAMILY SSF81296 5 93 2.62E-22 T 12-10-2018 IPR014756 Immunoglobulin E-set PA257_3562 1473bd5078049a2988ed78b17be72528 584 SUPERFAMILY SSF51445 90 499 9.11E-102 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_1453 8ed1080ecfa563110024cf643a834496 452 Gene3D G3DSA:3.40.190.10 1 226 2.1E-89 T 12-10-2018 PA257_1453 8ed1080ecfa563110024cf643a834496 452 Gene3D G3DSA:3.40.190.10 92 187 2.1E-89 T 12-10-2018 PA257_1453 8ed1080ecfa563110024cf643a834496 452 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 8 230 4.6E-27 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1453 8ed1080ecfa563110024cf643a834496 452 Gene3D G3DSA:1.10.530.10 249 430 1.3E-32 T 12-10-2018 PA257_1453 8ed1080ecfa563110024cf643a834496 452 SMART SM00062 6 231 1.1E-30 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1453 8ed1080ecfa563110024cf643a834496 452 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 274 302 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PA257_1453 8ed1080ecfa563110024cf643a834496 452 SUPERFAMILY SSF53850 7 230 2.11E-37 T 12-10-2018 PA257_1453 8ed1080ecfa563110024cf643a834496 452 SUPERFAMILY SSF53955 208 415 7.99E-33 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_1453 8ed1080ecfa563110024cf643a834496 452 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 1 451 43.325 T 12-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 PA257_1453 8ed1080ecfa563110024cf643a834496 452 Pfam PF01464 Transglycosylase SLT domain 257 364 4.7E-20 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 PA257_5164 788120fe3492a316d17b68fb7fa15792 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 2.0E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_5164 788120fe3492a316d17b68fb7fa15792 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.4E-48 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_5164 788120fe3492a316d17b68fb7fa15792 387 PIRSF PIRSF016578 3 379 5.1E-22 T 12-10-2018 PA257_5164 788120fe3492a316d17b68fb7fa15792 387 Gene3D G3DSA:2.40.110.10 120 231 7.7E-45 T 12-10-2018 PA257_5164 788120fe3492a316d17b68fb7fa15792 387 SUPERFAMILY SSF47203 226 379 2.09E-58 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_5164 788120fe3492a316d17b68fb7fa15792 387 SUPERFAMILY SSF56645 1 240 2.88E-81 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_5164 788120fe3492a316d17b68fb7fa15792 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_5164 788120fe3492a316d17b68fb7fa15792 387 Gene3D G3DSA:1.20.140.10 232 381 1.7E-53 T 12-10-2018 PA257_5164 788120fe3492a316d17b68fb7fa15792 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.9E-30 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_5164 788120fe3492a316d17b68fb7fa15792 387 Gene3D G3DSA:1.10.540.10 1 118 1.2E-37 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Gene3D G3DSA:2.10.70.100 498 544 1.0E-12 T 12-10-2018 PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SMART SM00052 858 1105 1.3E-77 T 12-10-2018 IPR001633 EAL domain PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Gene3D G3DSA:3.30.450.20 563 672 4.6E-21 T 12-10-2018 PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SUPERFAMILY SSF55785 539 668 1.92E-19 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Gene3D G3DSA:3.30.70.270 674 845 5.5E-56 T 12-10-2018 PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Gene3D G3DSA:3.30.450.20 305 427 1.0E-21 T 12-10-2018 PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 683 845 6.0E-42 T 12-10-2018 IPR000160 GGDEF domain PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SMART SM00267 674 846 1.3E-58 T 12-10-2018 IPR000160 GGDEF domain PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SUPERFAMILY SSF141868 865 1112 1.44E-74 T 12-10-2018 IPR035919 EAL domain superfamily PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Gene3D G3DSA:3.20.20.450 846 1107 1.7E-80 T 12-10-2018 IPR035919 EAL domain superfamily PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 552 681 8.2E-10 T 12-10-2018 IPR000014 PAS domain PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 299 421 4.3E-26 T 12-10-2018 IPR000014 PAS domain PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Pfam PF00563 EAL domain 866 1100 6.4E-64 T 12-10-2018 IPR001633 EAL domain PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SMART SM00091 555 624 1.1E-6 T 12-10-2018 IPR000014 PAS domain PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SMART SM00091 300 366 7.2E-6 T 12-10-2018 IPR000014 PAS domain PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SMART SM00091 427 495 5.5 T 12-10-2018 IPR000014 PAS domain PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SUPERFAMILY SSF55785 307 418 6.6E-21 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SUPERFAMILY SSF55073 690 846 3.14E-47 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Pfam PF00990 Diguanylate cyclase, GGDEF domain 685 842 8.5E-43 T 12-10-2018 IPR000160 GGDEF domain PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SUPERFAMILY SSF55785 435 544 1.33E-16 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Pfam PF08447 PAS fold 324 406 8.9E-11 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Pfam PF08447 PAS fold 450 537 5.4E-17 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Pfam PF05231 MASE1 16 289 1.4E-17 T 12-10-2018 IPR007895 MASE1 PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SMART SM00086 373 415 1.3E-7 T 12-10-2018 IPR001610 PAC motif PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SMART SM00086 501 543 2.3E-8 T 12-10-2018 IPR001610 PAC motif PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 SMART SM00086 632 674 120.0 T 12-10-2018 IPR001610 PAC motif PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Gene3D G3DSA:3.30.450.20 428 496 3.6E-16 T 12-10-2018 PA257_4626 e0d28f16ab0ef959ca1af273835475f2 1120 Pfam PF08448 PAS fold 563 675 1.1E-11 T 12-10-2018 IPR013656 PAS fold-4 PA257_4056 61664bb630eaa06215491c9eaae8540f 432 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 6 98 6.1E-20 T 12-10-2018 IPR032030 YscD, cytoplasmic domain PA257_4056 61664bb630eaa06215491c9eaae8540f 432 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 3 415 4.5E-79 T 12-10-2018 IPR012843 Type III secretion system YscD/HrpQ PA257_4056 61664bb630eaa06215491c9eaae8540f 432 Gene3D G3DSA:3.30.70.1770 287 349 8.8E-30 T 12-10-2018 PA257_4056 61664bb630eaa06215491c9eaae8540f 432 Gene3D G3DSA:2.60.200.20 1 123 5.3E-15 T 12-10-2018 PA257_4056 61664bb630eaa06215491c9eaae8540f 432 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 164 415 6.6E-95 T 12-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain PA257_3205 56c667cf0d2996aa326ace22d6ea9283 187 Gene3D G3DSA:1.10.1740.10 7 86 5.7E-10 T 12-10-2018 PA257_3205 56c667cf0d2996aa326ace22d6ea9283 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 169 4.4E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_3205 56c667cf0d2996aa326ace22d6ea9283 187 SUPERFAMILY SSF88659 103 173 6.73E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_3205 56c667cf0d2996aa326ace22d6ea9283 187 SUPERFAMILY SSF88946 18 94 8.63E-14 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3205 56c667cf0d2996aa326ace22d6ea9283 187 Pfam PF08281 Sigma-70, region 4 118 168 1.7E-12 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_3205 56c667cf0d2996aa326ace22d6ea9283 187 Gene3D G3DSA:1.10.10.10 100 176 1.3E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3205 56c667cf0d2996aa326ace22d6ea9283 187 Pfam PF04542 Sigma-70 region 2 20 83 1.9E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3203 11a2a67b3f4c001830ce81ea69b1b29d 304 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 49 274 1.2E-116 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related PA257_3203 11a2a67b3f4c001830ce81ea69b1b29d 304 PIRSF PIRSF028756 12 304 5.4E-138 T 12-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 PA257_3203 11a2a67b3f4c001830ce81ea69b1b29d 304 Gene3D G3DSA:3.40.50.300 12 284 2.8E-98 T 12-10-2018 PA257_3203 11a2a67b3f4c001830ce81ea69b1b29d 304 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 49 274 4.5E-116 T 12-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 PA257_3203 11a2a67b3f4c001830ce81ea69b1b29d 304 SUPERFAMILY SSF52540 80 268 3.32E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2229 cdbdeadf3e62176aac6a57da56b5d1b7 340 Pfam PF00092 von Willebrand factor type A domain 91 282 4.6E-32 T 12-10-2018 IPR002035 von Willebrand factor, type A PA257_2229 cdbdeadf3e62176aac6a57da56b5d1b7 340 Gene3D G3DSA:3.40.50.410 89 289 1.5E-53 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_2229 cdbdeadf3e62176aac6a57da56b5d1b7 340 SMART SM00327 89 289 9.1E-24 T 12-10-2018 IPR002035 von Willebrand factor, type A PA257_2229 cdbdeadf3e62176aac6a57da56b5d1b7 340 SUPERFAMILY SSF53300 86 266 1.63E-38 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_6217 32f0d17dda4859c69ae6254654c6abab 248 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 245 43.085 T 12-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB PA257_6217 32f0d17dda4859c69ae6254654c6abab 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 80 5.8E-19 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 PA257_6217 32f0d17dda4859c69ae6254654c6abab 248 Gene3D G3DSA:3.40.1280.10 80 245 7.9E-62 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PA257_6217 32f0d17dda4859c69ae6254654c6abab 248 Pfam PF00588 SpoU rRNA Methylase family 98 238 3.3E-40 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PA257_6217 32f0d17dda4859c69ae6254654c6abab 248 Gene3D G3DSA:3.30.1330.30 1 77 8.8E-23 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like PA257_6217 32f0d17dda4859c69ae6254654c6abab 248 SUPERFAMILY SSF55315 2 77 2.0E-18 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like PA257_6217 32f0d17dda4859c69ae6254654c6abab 248 SUPERFAMILY SSF75217 70 245 5.3E-49 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases PA257_6217 32f0d17dda4859c69ae6254654c6abab 248 SMART SM00967 6 81 6.3E-20 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 PA257_6217 32f0d17dda4859c69ae6254654c6abab 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 244 4.6E-82 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 PA257_4545 8e2efb2fd6fad49c914752e400d2f110 305 SUPERFAMILY SSF51569 3 292 4.5E-80 T 12-10-2018 PA257_4545 8e2efb2fd6fad49c914752e400d2f110 305 PIRSF PIRSF001365 3 301 1.7E-75 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4545 8e2efb2fd6fad49c914752e400d2f110 305 SMART SM01130 6 294 5.4E-86 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4545 8e2efb2fd6fad49c914752e400d2f110 305 Pfam PF00701 Dihydrodipicolinate synthetase family 8 291 4.7E-59 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4545 8e2efb2fd6fad49c914752e400d2f110 305 Gene3D G3DSA:3.20.20.70 4 297 1.9E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4545 8e2efb2fd6fad49c914752e400d2f110 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.2E-9 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4545 8e2efb2fd6fad49c914752e400d2f110 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.2E-9 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4545 8e2efb2fd6fad49c914752e400d2f110 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.2E-9 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_1272 1457c7b9f93f707e65713080b12632be 302 Pfam PF13437 HlyD family secretion protein 155 235 3.6E-10 T 12-10-2018 PA257_1272 1457c7b9f93f707e65713080b12632be 302 Gene3D G3DSA:2.40.50.100 45 115 1.9E-11 T 12-10-2018 PA257_1272 1457c7b9f93f707e65713080b12632be 302 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 228 7.7E-35 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_1272 1457c7b9f93f707e65713080b12632be 302 Pfam PF13533 Biotin-lipoyl like 45 90 1.6E-16 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PA257_1272 1457c7b9f93f707e65713080b12632be 302 Gene3D G3DSA:2.40.30.170 168 291 1.2E-24 T 12-10-2018 PA257_1272 1457c7b9f93f707e65713080b12632be 302 SUPERFAMILY SSF111369 43 195 1.28E-22 T 12-10-2018 PA257_3117 bb76d01656db4b5ac53cf00f4253e5f1 490 Pfam PF05593 RHS Repeat 409 445 8.3E-8 T 12-10-2018 IPR031325 RHS repeat PA257_3117 bb76d01656db4b5ac53cf00f4253e5f1 490 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 404 428 1.3E-4 T 12-10-2018 IPR006530 YD repeat PA257_3117 bb76d01656db4b5ac53cf00f4253e5f1 490 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 466 489 2.5E-4 T 12-10-2018 IPR006530 YD repeat PA257_0229 1d421c59d603fcdc1e0732c4d4458a91 133 Gene3D G3DSA:3.30.420.270 60 129 2.5E-16 T 12-10-2018 PA257_0229 1d421c59d603fcdc1e0732c4d4458a91 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 132 4.0E-28 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 PA257_1018 7fe7dbc0ebfcbf7835325047ccb609f5 594 Pfam PF00665 Integrase core domain 153 304 2.5E-11 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_1018 7fe7dbc0ebfcbf7835325047ccb609f5 594 SUPERFAMILY SSF53098 201 346 1.97E-14 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_1018 7fe7dbc0ebfcbf7835325047ccb609f5 594 Gene3D G3DSA:3.30.420.10 142 366 1.7E-6 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_1925 e137ed778e0411a75be62bbbb9ea6acc 232 Gene3D G3DSA:2.30.30.760 172 232 2.0E-14 T 12-10-2018 PA257_1925 e137ed778e0411a75be62bbbb9ea6acc 232 SMART SM00858 107 169 1.7E-9 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PA257_1925 e137ed778e0411a75be62bbbb9ea6acc 232 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 95 231 3.4E-39 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PA257_1925 e137ed778e0411a75be62bbbb9ea6acc 232 Pfam PF13144 Chaperone for flagella basal body P-ring formation 32 230 2.8E-61 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PA257_1925 e137ed778e0411a75be62bbbb9ea6acc 232 Gene3D G3DSA:3.90.1210.10 106 171 3.9E-6 T 12-10-2018 PA257_5782 41419f0a17d2118e5154ebe144f75cad 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 53.164 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_5782 41419f0a17d2118e5154ebe144f75cad 417 Pfam PF00464 Serine hydroxymethyltransferase 9 385 9.4E-183 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_5782 41419f0a17d2118e5154ebe144f75cad 417 Gene3D G3DSA:3.90.1150.10 11 393 4.2E-187 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_5782 41419f0a17d2118e5154ebe144f75cad 417 Gene3D G3DSA:3.40.640.10 37 288 4.2E-187 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_5782 41419f0a17d2118e5154ebe144f75cad 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_5782 41419f0a17d2118e5154ebe144f75cad 417 PIRSF PIRSF000412 2 417 4.9E-168 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PA257_5782 41419f0a17d2118e5154ebe144f75cad 417 SUPERFAMILY SSF53383 6 416 4.13E-182 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_2048 15d817d4291d1907545c4fca942a6c6d 389 SUPERFAMILY SSF52151 9 251 3.14E-49 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PA257_2048 15d817d4291d1907545c4fca942a6c6d 389 Gene3D G3DSA:3.40.1090.10 5 108 8.2E-19 T 12-10-2018 PA257_2048 15d817d4291d1907545c4fca942a6c6d 389 Gene3D G3DSA:3.40.1090.10 121 245 3.0E-8 T 12-10-2018 PA257_2048 15d817d4291d1907545c4fca942a6c6d 389 Pfam PF01734 Patatin-like phospholipase 14 226 3.2E-23 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 PA257_6294 62193d42e6942cb4c77388dcd0667c6e 492 SUPERFAMILY SSF56112 289 457 2.35E-11 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_6294 62193d42e6942cb4c77388dcd0667c6e 492 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 322 448 4.6E-9 T 12-10-2018 PA257_6294 62193d42e6942cb4c77388dcd0667c6e 492 SUPERFAMILY SSF56112 49 176 2.08E-13 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_5718 bf5e66fe520aa5b8535caa9e05f2041e 242 Gene3D G3DSA:3.60.140.10 1 242 8.6E-91 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily PA257_5718 bf5e66fe520aa5b8535caa9e05f2041e 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 239 4.4E-76 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase PA257_5718 bf5e66fe520aa5b8535caa9e05f2041e 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 240 2.1E-58 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase PA257_5718 bf5e66fe520aa5b8535caa9e05f2041e 242 SUPERFAMILY SSF64438 3 241 2.2E-84 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic PA257_6116 2eac24a92ca41adcd33518a15e95d470 178 SUPERFAMILY SSF55811 19 177 1.21E-34 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_6116 2eac24a92ca41adcd33518a15e95d470 178 Gene3D G3DSA:3.90.79.10 11 178 1.4E-43 T 12-10-2018 PA257_6116 2eac24a92ca41adcd33518a15e95d470 178 Pfam PF00293 NUDIX domain 47 156 3.1E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_6116 2eac24a92ca41adcd33518a15e95d470 178 PIRSF PIRSF017340 10 178 4.9E-77 T 12-10-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 PA257_1348 bd1b2a0f501ffd85867221230380da16 306 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 92 276 1.7E-54 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PA257_1348 bd1b2a0f501ffd85867221230380da16 306 Pfam PF07549 SecD/SecF GG Motif 31 57 1.7E-12 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PA257_1348 bd1b2a0f501ffd85867221230380da16 306 SUPERFAMILY SSF82866 70 286 1.12E-37 T 12-10-2018 PA257_1348 bd1b2a0f501ffd85867221230380da16 306 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 36 279 7.6E-80 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PA257_1348 bd1b2a0f501ffd85867221230380da16 306 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 8 290 28.093 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PA257_1348 bd1b2a0f501ffd85867221230380da16 306 PRINTS PR01755 Bacterial translocase SecF protein signature 35 50 2.6E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PA257_1348 bd1b2a0f501ffd85867221230380da16 306 PRINTS PR01755 Bacterial translocase SecF protein signature 147 161 2.6E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PA257_1348 bd1b2a0f501ffd85867221230380da16 306 PRINTS PR01755 Bacterial translocase SecF protein signature 195 213 2.6E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PA257_1348 bd1b2a0f501ffd85867221230380da16 306 PRINTS PR01755 Bacterial translocase SecF protein signature 227 242 2.6E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PA257_1348 bd1b2a0f501ffd85867221230380da16 306 Pfam PF02355 Protein export membrane protein 109 287 8.2E-64 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PA257_1348 bd1b2a0f501ffd85867221230380da16 306 Gene3D G3DSA:1.20.1640.10 100 292 1.1E-9 T 12-10-2018 PA257_2349 0e71736700f26cd0b7393ffc6f605ef9 212 SUPERFAMILY SSF46689 9 76 4.14E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2349 0e71736700f26cd0b7393ffc6f605ef9 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 8.6E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2349 0e71736700f26cd0b7393ffc6f605ef9 212 SUPERFAMILY SSF48498 87 195 1.14E-9 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_2349 0e71736700f26cd0b7393ffc6f605ef9 212 Pfam PF13305 WHG domain 87 173 8.7E-8 T 12-10-2018 IPR025996 WHG domain PA257_2349 0e71736700f26cd0b7393ffc6f605ef9 212 Gene3D G3DSA:1.10.357.10 9 192 2.1E-30 T 12-10-2018 PA257_2349 0e71736700f26cd0b7393ffc6f605ef9 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2349 0e71736700f26cd0b7393ffc6f605ef9 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3588 349de88a2305ec4d884010758f7123d2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 44 61 1.6E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3588 349de88a2305ec4d884010758f7123d2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 130 1.6E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3588 349de88a2305ec4d884010758f7123d2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 181 1.6E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3588 349de88a2305ec4d884010758f7123d2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 210 1.6E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3588 349de88a2305ec4d884010758f7123d2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 246 266 1.6E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3588 349de88a2305ec4d884010758f7123d2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 229 1.6E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3588 349de88a2305ec4d884010758f7123d2 286 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 178 206 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_3588 349de88a2305ec4d884010758f7123d2 286 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 43 228 0.008 T 12-10-2018 PA257_3588 349de88a2305ec4d884010758f7123d2 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 191 210 9.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3588 349de88a2305ec4d884010758f7123d2 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 9.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3588 349de88a2305ec4d884010758f7123d2 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 9.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3588 349de88a2305ec4d884010758f7123d2 286 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 52 281 1.4E-66 T 12-10-2018 PA257_3588 349de88a2305ec4d884010758f7123d2 286 SUPERFAMILY SSF51735 41 284 8.23E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3588 349de88a2305ec4d884010758f7123d2 286 Gene3D G3DSA:3.40.50.720 2 283 4.0E-95 T 12-10-2018 PA257_1303 960d763810cea5898289309926cda1a8 523 SMART SM00487 154 361 4.8E-52 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_1303 960d763810cea5898289309926cda1a8 523 Pfam PF00271 Helicase conserved C-terminal domain 369 478 9.8E-30 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1303 960d763810cea5898289309926cda1a8 523 SUPERFAMILY SSF52540 210 494 1.97E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1303 960d763810cea5898289309926cda1a8 523 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 290 298 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PA257_1303 960d763810cea5898289309926cda1a8 523 Gene3D G3DSA:3.40.50.300 352 517 2.5E-47 T 12-10-2018 PA257_1303 960d763810cea5898289309926cda1a8 523 SMART SM00490 397 478 2.0E-32 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1303 960d763810cea5898289309926cda1a8 523 Gene3D G3DSA:3.40.50.300 78 349 2.8E-74 T 12-10-2018 PA257_1303 960d763810cea5898289309926cda1a8 523 Pfam PF00270 DEAD/DEAH box helicase 159 334 2.9E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_1303 960d763810cea5898289309926cda1a8 523 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 134 516 53.172 T 12-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 PA257_1800 2e94e38c8f95d27f9790b11a8e4706cb 180 Gene3D G3DSA:3.40.430.10 6 173 2.7E-45 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PA257_1800 2e94e38c8f95d27f9790b11a8e4706cb 180 Pfam PF01872 RibD C-terminal domain 83 166 4.7E-15 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PA257_1800 2e94e38c8f95d27f9790b11a8e4706cb 180 SUPERFAMILY SSF53597 3 174 1.22E-37 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PA257_1225 258af7dd577615863ce57f57c3f56572 259 PIRSF PIRSF002854 1 259 3.2E-103 T 12-10-2018 IPR004872 Lipoprotein NlpA family PA257_1225 258af7dd577615863ce57f57c3f56572 259 Gene3D G3DSA:3.40.190.10 26 257 3.8E-100 T 12-10-2018 PA257_1225 258af7dd577615863ce57f57c3f56572 259 SUPERFAMILY SSF53850 23 259 3.09E-85 T 12-10-2018 PA257_1225 258af7dd577615863ce57f57c3f56572 259 Pfam PF03180 NLPA lipoprotein 25 259 1.4E-101 T 12-10-2018 IPR004872 Lipoprotein NlpA family PA257_1225 258af7dd577615863ce57f57c3f56572 259 Gene3D G3DSA:3.40.190.10 105 209 3.8E-100 T 12-10-2018 PA257_2132 f2717f018730c63156a81e6cb10c2e3c 358 Pfam PF01008 Initiation factor 2 subunit family 53 341 3.4E-74 T 12-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 PA257_2132 f2717f018730c63156a81e6cb10c2e3c 358 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 10 352 40.114 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 PA257_2132 f2717f018730c63156a81e6cb10c2e3c 358 Gene3D G3DSA:1.20.120.1840 6 193 1.6E-54 T 12-10-2018 PA257_2132 f2717f018730c63156a81e6cb10c2e3c 358 Gene3D G3DSA:3.40.50.10470 194 349 3.7E-54 T 12-10-2018 PA257_2132 f2717f018730c63156a81e6cb10c2e3c 358 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 12 341 2.7E-141 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 PA257_2132 f2717f018730c63156a81e6cb10c2e3c 358 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 41 341 1.4E-106 T 12-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 PA257_2132 f2717f018730c63156a81e6cb10c2e3c 358 SUPERFAMILY SSF100950 9 347 1.17E-114 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_3778 f700d94bb9faec3b04df0bcb0e13c43e 529 Gene3D G3DSA:3.40.50.300 3 280 9.7E-55 T 12-10-2018 PA257_3778 f700d94bb9faec3b04df0bcb0e13c43e 529 Gene3D G3DSA:3.40.50.300 282 527 2.1E-55 T 12-10-2018 PA257_3778 f700d94bb9faec3b04df0bcb0e13c43e 529 SUPERFAMILY SSF52540 6 237 7.93E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3778 f700d94bb9faec3b04df0bcb0e13c43e 529 Pfam PF12848 ABC transporter 224 308 6.0E-21 T 12-10-2018 IPR032781 ABC-transporter extension domain PA257_3778 f700d94bb9faec3b04df0bcb0e13c43e 529 Pfam PF00005 ABC transporter 336 465 1.4E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3778 f700d94bb9faec3b04df0bcb0e13c43e 529 SMART SM00382 344 511 9.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3778 f700d94bb9faec3b04df0bcb0e13c43e 529 SMART SM00382 26 245 2.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3778 f700d94bb9faec3b04df0bcb0e13c43e 529 Pfam PF00005 ABC transporter 18 184 7.2E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3778 f700d94bb9faec3b04df0bcb0e13c43e 529 SUPERFAMILY SSF52540 297 526 2.06E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4907 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 Gene3D G3DSA:2.40.50.140 20 97 3.3E-17 T 12-10-2018 PA257_4907 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 28 450 66.545 T 12-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 PA257_4907 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 272 442 4.4E-59 T 12-10-2018 PA257_4907 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 SUPERFAMILY SSF53335 86 448 6.58E-77 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_4907 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 276 447 4.6E-24 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PA257_4907 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 Gene3D G3DSA:3.40.1350.30 145 282 1.4E-113 T 12-10-2018 PA257_4907 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 Gene3D G3DSA:3.40.50.150 98 444 1.4E-113 T 12-10-2018 PA257_4907 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site PA257_4907 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 411 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site PA257_4907 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 SUPERFAMILY SSF50249 17 74 9.71E-11 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_1241 6094d8df2798aa55a7786a580c2f1742 463 SMART SM00670 13 147 4.8E-10 T 12-10-2018 IPR002716 PIN domain PA257_1241 6094d8df2798aa55a7786a580c2f1742 463 SUPERFAMILY SSF52540 208 442 1.64E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1241 6094d8df2798aa55a7786a580c2f1742 463 SUPERFAMILY SSF88723 12 161 5.3E-17 T 12-10-2018 IPR029060 PIN-like domain superfamily PA257_1241 6094d8df2798aa55a7786a580c2f1742 463 Gene3D G3DSA:3.40.50.300 252 461 1.7E-59 T 12-10-2018 PA257_1241 6094d8df2798aa55a7786a580c2f1742 463 Gene3D G3DSA:3.40.50.1010 9 162 9.1E-28 T 12-10-2018 PA257_1241 6094d8df2798aa55a7786a580c2f1742 463 Pfam PF13638 PIN domain 15 160 2.0E-39 T 12-10-2018 IPR002716 PIN domain PA257_1241 6094d8df2798aa55a7786a580c2f1742 463 Pfam PF02562 PhoH-like protein 254 450 1.4E-45 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 PA257_0966 b0b515ac0417977912e260f34b0e1b4e 500 Pfam PF00392 Bacterial regulatory proteins, gntR family 33 95 1.1E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0966 b0b515ac0417977912e260f34b0e1b4e 500 Gene3D G3DSA:3.40.640.10 171 389 2.6E-99 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_0966 b0b515ac0417977912e260f34b0e1b4e 500 SMART SM00345 36 95 9.4E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0966 b0b515ac0417977912e260f34b0e1b4e 500 Gene3D G3DSA:1.10.10.10 28 98 1.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0966 b0b515ac0417977912e260f34b0e1b4e 500 Gene3D G3DSA:3.90.1150.10 128 494 2.6E-99 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_0966 b0b515ac0417977912e260f34b0e1b4e 500 Pfam PF00155 Aminotransferase class I and II 196 478 6.6E-24 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_0966 b0b515ac0417977912e260f34b0e1b4e 500 SUPERFAMILY SSF53383 127 496 4.81E-90 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_0966 b0b515ac0417977912e260f34b0e1b4e 500 SUPERFAMILY SSF46785 28 98 1.47E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5286 8101937243b14fcc9664b551ec1b7a7c 97 Pfam PF11006 Protein of unknown function (DUF2845) 20 93 1.0E-16 T 12-10-2018 IPR021268 Protein of unknown function DUF2845 PA257_4944 a8bb4239723023206c892c4cf5e15113 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 49 330 8.2E-77 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 PA257_4944 a8bb4239723023206c892c4cf5e15113 332 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 332 154.03 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 PA257_4944 a8bb4239723023206c892c4cf5e15113 332 PIRSF PIRSF017020 1 332 4.0E-117 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 PA257_4944 a8bb4239723023206c892c4cf5e15113 332 SUPERFAMILY SSF53187 6 329 1.49E-76 T 12-10-2018 PA257_4944 a8bb4239723023206c892c4cf5e15113 332 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 6 328 9.1E-116 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 PA257_4944 a8bb4239723023206c892c4cf5e15113 332 Gene3D G3DSA:3.40.630.10 4 332 1.7E-107 T 12-10-2018 PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 Gene3D G3DSA:3.40.50.720 2 265 7.4E-88 T 12-10-2018 PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 3.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 3.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 6.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 6.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 6.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 6.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 6.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 6.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 203 4.2E-6 T 12-10-2018 PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 Pfam PF00106 short chain dehydrogenase 15 201 9.8E-62 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 SUPERFAMILY SSF51735 9 265 1.16E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0946 1e77a11bda97dc962bea80db87c4f364 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_3416 6abafe36a7138d962bdf7a8061468f66 478 Pfam PF02397 Bacterial sugar transferase 284 472 1.3E-67 T 12-10-2018 IPR003362 Bacterial sugar transferase PA257_3416 6abafe36a7138d962bdf7a8061468f66 478 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 46 478 4.0E-148 T 12-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 PA257_3416 6abafe36a7138d962bdf7a8061468f66 478 Pfam PF13727 CoA-binding domain 70 248 1.1E-27 T 12-10-2018 PA257_3416 6abafe36a7138d962bdf7a8061468f66 478 Gene3D G3DSA:3.40.50.720 150 269 6.7E-21 T 12-10-2018 PA257_3416 6abafe36a7138d962bdf7a8061468f66 478 SUPERFAMILY SSF51735 151 267 3.46E-9 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3416 6abafe36a7138d962bdf7a8061468f66 478 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 34 477 1.3E-136 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PA257_4608 89a7138f57e2e95d2fadde84a2bc5633 193 Gene3D G3DSA:3.90.1720.10 7 179 3.8E-43 T 12-10-2018 PA257_4608 89a7138f57e2e95d2fadde84a2bc5633 193 Pfam PF00877 NlpC/P60 family 70 178 8.0E-30 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain PA257_4608 89a7138f57e2e95d2fadde84a2bc5633 193 SUPERFAMILY SSF54001 54 181 1.77E-39 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_1705 f21a02637524229fe4004312376d3a70 65 SUPERFAMILY SSF55008 2 64 2.62E-16 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_1705 f21a02637524229fe4004312376d3a70 65 Gene3D G3DSA:3.30.70.100 3 62 1.3E-18 T 12-10-2018 PA257_1705 f21a02637524229fe4004312376d3a70 65 Pfam PF00403 Heavy-metal-associated domain 3 60 1.6E-12 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_1705 f21a02637524229fe4004312376d3a70 65 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PA257_2331 a1db09babdc4a52051b513766c055c99 230 SUPERFAMILY SSF56784 3 215 2.36E-58 T 12-10-2018 IPR036412 HAD-like superfamily PA257_2331 a1db09babdc4a52051b513766c055c99 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 186 2.6E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_2331 a1db09babdc4a52051b513766c055c99 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 180 5.8E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_2331 a1db09babdc4a52051b513766c055c99 230 Gene3D G3DSA:3.40.50.1000 7 207 2.5E-53 T 12-10-2018 IPR023214 HAD superfamily PA257_2331 a1db09babdc4a52051b513766c055c99 230 Gene3D G3DSA:1.10.150.240 19 86 2.5E-53 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PA257_2331 a1db09babdc4a52051b513766c055c99 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 186 7.7E-31 T 12-10-2018 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.40.50.1380 936 1072 8.7E-38 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.30.470.20 665 935 1.7E-118 T 12-10-2018 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF52440 1 127 2.01E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 SMART SM01096 424 547 6.4E-75 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 1.0E-32 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.4E-72 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.0E-66 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.0E-66 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 4.0E-66 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.0E-66 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.0E-66 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 4.0E-66 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.0E-66 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.30.470.20 119 403 2.1E-131 T 12-10-2018 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF48108 396 554 6.28E-53 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.126 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.40.50.20 1 116 1.0E-49 T 12-10-2018 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF56059 128 401 1.94E-109 T 12-10-2018 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF56059 673 933 6.72E-102 T 12-10-2018 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF52440 557 675 2.3E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.405 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:1.10.1030.10 404 553 3.1E-52 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF52335 938 1069 1.01E-39 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02142 MGS-like domain 958 1041 2.2E-19 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 8.7E-41 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 SMART SM00851 955 1041 2.7E-32 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain PA257_5973 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.40.50.20 554 662 4.4E-49 T 12-10-2018 PA257_6780 288ffca928be06d2ba37bb1dfec6428e 159 Pfam PF13279 Thioesterase-like superfamily 12 126 2.0E-18 T 12-10-2018 PA257_6780 288ffca928be06d2ba37bb1dfec6428e 159 Gene3D G3DSA:3.10.129.10 2 140 5.5E-37 T 12-10-2018 PA257_6780 288ffca928be06d2ba37bb1dfec6428e 159 SUPERFAMILY SSF54637 6 156 1.46E-45 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_5924 621d309a04196ca6a8a43e721a22bd35 107 Pfam PF00355 Rieske [2Fe-2S] domain 3 86 7.3E-11 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PA257_5924 621d309a04196ca6a8a43e721a22bd35 107 Gene3D G3DSA:2.102.10.10 2 107 7.0E-16 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_5924 621d309a04196ca6a8a43e721a22bd35 107 SUPERFAMILY SSF50022 4 106 1.14E-24 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 SUPERFAMILY SSF51569 2 289 3.87E-107 T 12-10-2018 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 285 1.6E-109 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 286 9.8E-116 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 Gene3D G3DSA:3.20.20.70 2 292 1.8E-125 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 8.9E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 8.9E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 8.9E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 8.9E-35 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 69.373 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 PIRSF PIRSF001365 1 292 2.3E-100 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_4816 a690f3e6c6bcced61a82ee4278ce937e 292 SMART SM01130 1 289 1.5E-151 T 12-10-2018 IPR002220 DapA-like GO:0016829 PA257_5553 eee87372c30c04aaae568a01452e2a67 481 SMART SM00845 328 479 3.7E-79 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 PA257_5553 eee87372c30c04aaae568a01452e2a67 481 Gene3D G3DSA:1.10.10.410 415 481 9.7E-25 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PA257_5553 eee87372c30c04aaae568a01452e2a67 481 Gene3D G3DSA:1.10.150.380 297 414 3.7E-35 T 12-10-2018 PA257_5553 eee87372c30c04aaae568a01452e2a67 481 Pfam PF02637 GatB domain 328 479 1.4E-52 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 PA257_5553 eee87372c30c04aaae568a01452e2a67 481 SUPERFAMILY SSF89095 297 402 8.11E-35 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 PA257_5553 eee87372c30c04aaae568a01452e2a67 481 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 479 7.6E-171 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PA257_5553 eee87372c30c04aaae568a01452e2a67 481 SUPERFAMILY SSF55931 4 296 3.2E-120 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_5553 eee87372c30c04aaae568a01452e2a67 481 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 12-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 PA257_5553 eee87372c30c04aaae568a01452e2a67 481 Pfam PF02934 GatB/GatE catalytic domain 5 288 1.6E-111 T 12-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 PA257_5553 eee87372c30c04aaae568a01452e2a67 481 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 480 38.589 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PA257_2167 89973845fe45e36b8b01cbaa37142cc1 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 314 53.856 T 12-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 PA257_2167 89973845fe45e36b8b01cbaa37142cc1 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PA257_2167 89973845fe45e36b8b01cbaa37142cc1 319 SUPERFAMILY SSF51395 3 311 4.03E-69 T 12-10-2018 PA257_2167 89973845fe45e36b8b01cbaa37142cc1 319 Gene3D G3DSA:1.20.225.30 247 317 3.2E-12 T 12-10-2018 PA257_2167 89973845fe45e36b8b01cbaa37142cc1 319 Pfam PF01207 Dihydrouridine synthase (Dus) 5 248 1.9E-64 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PA257_2167 89973845fe45e36b8b01cbaa37142cc1 319 PIRSF PIRSF006621 1 319 4.1E-76 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PA257_2167 89973845fe45e36b8b01cbaa37142cc1 319 Gene3D G3DSA:3.20.20.70 1 240 2.3E-74 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 198 1.4E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 Gene3D G3DSA:3.40.50.2300 2 128 3.7E-23 T 12-10-2018 PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 Pfam PF00072 Response regulator receiver domain 5 117 7.7E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 SMART SM00448 3 117 1.8E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 Gene3D G3DSA:1.10.10.10 136 206 1.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 9.1E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 9.1E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 9.1E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 SUPERFAMILY SSF52172 3 127 8.97E-23 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 SMART SM00421 143 200 2.8E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4398 4fe485549e41b6e4f123717ac7f5a351 210 SUPERFAMILY SSF46894 136 201 2.11E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_5257 5d6198366ac52e04b51c59c736db2941 121 Gene3D G3DSA:1.10.1660.10 1 121 2.0E-15 T 12-10-2018 PA257_5257 5d6198366ac52e04b51c59c736db2941 121 SMART SM00422 4 73 5.0E-20 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5257 5d6198366ac52e04b51c59c736db2941 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 8.0E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5257 5d6198366ac52e04b51c59c736db2941 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 8.0E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5257 5d6198366ac52e04b51c59c736db2941 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 8.0E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5257 5d6198366ac52e04b51c59c736db2941 121 Pfam PF13411 MerR HTH family regulatory protein 4 72 8.2E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5257 5d6198366ac52e04b51c59c736db2941 121 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 119 2.1E-62 T 12-10-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 PA257_5257 5d6198366ac52e04b51c59c736db2941 121 SUPERFAMILY SSF46955 4 109 1.65E-16 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 190 0.0013 T 12-10-2018 PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 249 2.8E-61 T 12-10-2018 PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.7E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 Gene3D G3DSA:3.40.50.720 6 250 1.5E-79 T 12-10-2018 PA257_0209 5eda4bd461953f9d97fbf2a5256948f7 250 SUPERFAMILY SSF51735 10 249 3.48E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6706 e3ed2bd10feed59ba339d8824da74464 151 Pfam PF00692 dUTPase 17 149 1.8E-40 T 12-10-2018 IPR029054 dUTPase-like PA257_6706 e3ed2bd10feed59ba339d8824da74464 151 Gene3D G3DSA:2.70.40.10 1 150 5.0E-53 T 12-10-2018 IPR036157 dUTPase-like superfamily PA257_6706 e3ed2bd10feed59ba339d8824da74464 151 SUPERFAMILY SSF51283 2 149 4.19E-53 T 12-10-2018 IPR036157 dUTPase-like superfamily PA257_6706 e3ed2bd10feed59ba339d8824da74464 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 4.7E-48 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 PA257_6706 e3ed2bd10feed59ba339d8824da74464 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 33.336 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 8.6E-38 T 12-10-2018 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 8.6E-38 T 12-10-2018 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 8.6E-38 T 12-10-2018 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 8.6E-38 T 12-10-2018 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 8.6E-38 T 12-10-2018 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 8.6E-38 T 12-10-2018 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 8.6E-38 T 12-10-2018 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 113 2.3E-11 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 Pfam PF13244 Domain of unknown function (DUF4040) 611 674 2.7E-17 T 12-10-2018 IPR025383 Domain of unknown function DUF4040 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 788 911 3.3E-37 T 12-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein PA257_4767 181abe415973f1be62a2f000d8c2babe 933 Pfam PF00361 Proton-conducting membrane transporter 126 401 1.9E-64 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 351 373 4.9E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 77 97 4.9E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PA257_4767 181abe415973f1be62a2f000d8c2babe 933 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 256 278 4.9E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 475 489 5.7E-5 T 12-10-2018 PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 511 527 5.7E-5 T 12-10-2018 PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 SUPERFAMILY SSF52317 437 624 1.12E-22 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 Pfam PF00425 chorismate binding enzyme 122 381 5.5E-47 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 511 522 2.8E-9 T 12-10-2018 PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 478 487 2.8E-9 T 12-10-2018 PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 597 610 2.8E-9 T 12-10-2018 PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 Gene3D G3DSA:3.40.50.880 436 625 2.6E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 Pfam PF00117 Glutamine amidotransferase class-I 439 618 1.6E-25 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 SUPERFAMILY SSF56322 66 390 6.28E-67 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 PRINTS PR00097 Anthranilate synthase component II signature 511 522 3.6E-8 T 12-10-2018 PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 PRINTS PR00097 Anthranilate synthase component II signature 597 610 3.6E-8 T 12-10-2018 PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 PRINTS PR00097 Anthranilate synthase component II signature 437 451 3.6E-8 T 12-10-2018 PA257_0881 c3f7d40fde53d82c0a32447774370b66 627 Gene3D G3DSA:3.60.120.10 2 391 1.6E-134 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 1.0E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 SUPERFAMILY SSF52343 204 336 3.67E-36 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 Gene3D G3DSA:3.40.50.80 202 335 3.5E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 Pfam PF00970 Oxidoreductase FAD-binding domain 111 204 1.3E-21 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 Gene3D G3DSA:2.40.30.10 99 201 8.1E-25 T 12-10-2018 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 SUPERFAMILY SSF54292 3 88 1.84E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 Pfam PF00175 Oxidoreductase NAD-binding domain 214 317 3.4E-20 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 4.7E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 4.7E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 247 4.7E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 232 4.7E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 161 4.7E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 149 4.7E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 SUPERFAMILY SSF63380 107 204 6.63E-24 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 303 311 1.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 238 247 1.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 232 1.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 161 1.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_3057 b728702eefa15c5f2db8f5aedd9075ea 340 Gene3D G3DSA:3.10.20.30 1 98 2.1E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 Gene3D G3DSA:3.40.50.300 361 559 4.0E-49 T 12-10-2018 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 Gene3D G3DSA:3.40.50.300 167 359 5.1E-62 T 12-10-2018 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 332 2.7E-10 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 SMART SM00382 612 754 5.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 SMART SM00382 215 360 1.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 Gene3D G3DSA:1.10.1780.10 1 156 7.0E-39 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 SUPERFAMILY SSF81923 10 131 5.23E-19 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 4.2E-36 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 8.4E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 661 679 8.4E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 690 708 8.4E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 723 737 8.4E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 10 849 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 Gene3D G3DSA:3.40.50.300 565 778 1.1E-63 T 12-10-2018 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 311 323 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 781 848 1.7E-5 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 71 2.2E-10 T 12-10-2018 IPR004176 Clp, N-terminal PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 SUPERFAMILY SSF52540 561 838 1.01E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3271 6d1413d32b4e0b01a2e279392e7e177d 849 SUPERFAMILY SSF52540 176 535 6.81E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2241 dee3d0a070d1a6388161a39ad95bba8a 456 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 452 9.9E-158 T 12-10-2018 IPR031617 Putative exopolysaccharide exporter PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 1.0E-59 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 63 4.2E-20 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 SUPERFAMILY SSF52374 1 156 4.29E-47 T 12-10-2018 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 SMART SM00764 12 153 0.0096 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 94 1.0E-5 T 12-10-2018 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 Pfam PF01467 Cytidylyltransferase-like 5 133 7.9E-24 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 36.504 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 Gene3D G3DSA:3.40.50.620 1 159 2.4E-59 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 2.6E-50 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.6E-50 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.6E-50 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 2.6E-50 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PA257_0438 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 2.6E-50 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PA257_4629 59bb7f814d400f2394dec1701116a9a7 200 Pfam PF13505 Outer membrane protein beta-barrel domain 9 200 1.4E-9 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel PA257_4629 59bb7f814d400f2394dec1701116a9a7 200 TIGRFAM TIGR03304 OMP85_target: outer membrane insertion C-terminal signal 191 200 0.22 T 12-10-2018 IPR017690 Outer membrane insertion C-terminal signal, omp85 target PA257_4629 59bb7f814d400f2394dec1701116a9a7 200 Gene3D G3DSA:2.40.160.20 23 200 5.2E-55 T 12-10-2018 PA257_4629 59bb7f814d400f2394dec1701116a9a7 200 SUPERFAMILY SSF56925 45 200 1.86E-18 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PA257_1826 ce99c953484666d8715d4c479d9eb9c4 323 Gene3D G3DSA:1.10.8.450 242 274 1.7E-113 T 12-10-2018 PA257_1826 ce99c953484666d8715d4c479d9eb9c4 323 SUPERFAMILY SSF53850 30 256 2.06E-54 T 12-10-2018 PA257_1826 ce99c953484666d8715d4c479d9eb9c4 323 Gene3D G3DSA:3.40.190.10 32 304 1.7E-113 T 12-10-2018 PA257_1826 ce99c953484666d8715d4c479d9eb9c4 323 SMART SM00062 31 247 6.2E-31 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1826 ce99c953484666d8715d4c479d9eb9c4 323 Pfam PF09084 NMT1/THI5 like 56 250 1.8E-16 T 12-10-2018 IPR015168 SsuA/THI5-like PA257_1826 ce99c953484666d8715d4c479d9eb9c4 323 Gene3D G3DSA:3.40.190.10 111 210 1.7E-113 T 12-10-2018 PA257_1826 ce99c953484666d8715d4c479d9eb9c4 323 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 32 313 3.4E-76 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 PA257_1150 9937c0ece1b69844aac6fbd8168be899 646 SUPERFAMILY SSF56601 251 607 1.59E-102 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_1150 9937c0ece1b69844aac6fbd8168be899 646 Gene3D G3DSA:3.90.1310.10 64 246 1.9E-50 T 12-10-2018 PA257_1150 9937c0ece1b69844aac6fbd8168be899 646 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 604 3.5E-75 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PA257_1150 9937c0ece1b69844aac6fbd8168be899 646 SUPERFAMILY SSF56519 56 250 4.19E-53 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 PA257_1150 9937c0ece1b69844aac6fbd8168be899 646 Gene3D G3DSA:3.40.710.10 250 623 1.9E-103 T 12-10-2018 PA257_1150 9937c0ece1b69844aac6fbd8168be899 646 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 607 1.7E-237 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_1150 9937c0ece1b69844aac6fbd8168be899 646 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 236 8.1E-47 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PA257_1150 9937c0ece1b69844aac6fbd8168be899 646 Gene3D G3DSA:3.30.1390.30 85 161 1.9E-50 T 12-10-2018 PA257_1150 9937c0ece1b69844aac6fbd8168be899 646 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 611 52.464 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 Gene3D G3DSA:3.40.250.10 262 352 1.9E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 SUPERFAMILY SSF52821 106 235 1.7E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 SUPERFAMILY SSF52821 254 352 8.64E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 ProSitePatterns PS00380 Rhodanese signature 1. 402 413 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 SMART SM00450 377 472 1.7E-5 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 SMART SM00450 131 229 7.7E-7 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 SMART SM00450 8 105 1.7E-13 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 SMART SM00450 267 359 6.1E-7 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 Pfam PF00581 Rhodanese-like domain 379 468 9.1E-9 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 Pfam PF00581 Rhodanese-like domain 16 101 1.9E-8 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 Pfam PF00581 Rhodanese-like domain 132 225 7.0E-9 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 Pfam PF00581 Rhodanese-like domain 279 352 1.8E-8 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 Gene3D G3DSA:3.40.250.10 374 480 3.6E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 SUPERFAMILY SSF52821 375 524 1.83E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 SUPERFAMILY SSF52821 14 121 4.98E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 Gene3D G3DSA:3.40.250.10 127 234 1.9E-21 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_2954 03a0562d22bf3e2bedd2bffda062ac82 527 Gene3D G3DSA:3.40.250.10 14 110 3.5E-21 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_0205 c097786137773d496883413acfb1fbcd 642 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 250 311 4.2E-17 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PA257_0205 c097786137773d496883413acfb1fbcd 642 SUPERFAMILY SSF50341 495 628 1.57E-30 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_0205 c097786137773d496883413acfb1fbcd 642 SMART SM01231 248 311 6.7E-23 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PA257_0205 c097786137773d496883413acfb1fbcd 642 Gene3D G3DSA:1.10.287.560 248 311 1.1E-17 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 PA257_0205 c097786137773d496883413acfb1fbcd 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 495 2.2E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0205 c097786137773d496883413acfb1fbcd 642 SUPERFAMILY SSF55874 313 494 3.01E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0205 c097786137773d496883413acfb1fbcd 642 SUPERFAMILY SSF47226 4 127 2.62E-33 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0205 c097786137773d496883413acfb1fbcd 642 Gene3D G3DSA:2.30.30.40 496 625 2.1E-40 T 12-10-2018 PA257_0205 c097786137773d496883413acfb1fbcd 642 SMART SM00073 5 102 8.9E-31 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0205 c097786137773d496883413acfb1fbcd 642 Pfam PF01584 CheW-like domain 501 628 2.1E-26 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_0205 c097786137773d496883413acfb1fbcd 642 Gene3D G3DSA:2.40.50.180 519 584 2.1E-40 T 12-10-2018 PA257_0205 c097786137773d496883413acfb1fbcd 642 SMART SM00387 356 496 6.0E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0205 c097786137773d496883413acfb1fbcd 642 Gene3D G3DSA:3.30.565.10 312 495 2.7E-56 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0205 c097786137773d496883413acfb1fbcd 642 SMART SM00260 488 629 4.6E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_0205 c097786137773d496883413acfb1fbcd 642 Gene3D G3DSA:1.20.120.160 2 138 7.9E-39 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0205 c097786137773d496883413acfb1fbcd 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0205 c097786137773d496883413acfb1fbcd 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 450 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0205 c097786137773d496883413acfb1fbcd 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0205 c097786137773d496883413acfb1fbcd 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0205 c097786137773d496883413acfb1fbcd 642 Pfam PF01627 Hpt domain 7 105 1.7E-21 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0205 c097786137773d496883413acfb1fbcd 642 SUPERFAMILY SSF47384 250 312 7.45E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2870 59fc0506e9764e6083fd8c0382a507ea 413 Gene3D G3DSA:3.40.50.1820 2 231 1.2E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2870 59fc0506e9764e6083fd8c0382a507ea 413 Pfam PF01738 Dienelactone hydrolase family 16 230 1.3E-46 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 PA257_2870 59fc0506e9764e6083fd8c0382a507ea 413 SUPERFAMILY SSF53474 2 230 1.73E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2870 59fc0506e9764e6083fd8c0382a507ea 413 Pfam PF12680 SnoaL-like domain 249 357 6.3E-7 T 12-10-2018 IPR037401 SnoaL-like domain PA257_2870 59fc0506e9764e6083fd8c0382a507ea 413 SUPERFAMILY SSF54427 238 380 2.15E-23 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_2870 59fc0506e9764e6083fd8c0382a507ea 413 Gene3D G3DSA:3.10.450.50 239 376 6.3E-23 T 12-10-2018 PA257_2878 0c582cd54dede52f439daad267a12d93 134 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 33 4.1E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2878 0c582cd54dede52f439daad267a12d93 134 SUPERFAMILY SSF54523 13 96 6.91E-11 T 12-10-2018 PA257_2878 0c582cd54dede52f439daad267a12d93 134 Gene3D G3DSA:3.30.700.10 13 94 1.4E-6 T 12-10-2018 PA257_6188 c57b92fe4ea140fff3294341a8dc91c0 238 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6188 c57b92fe4ea140fff3294341a8dc91c0 238 PIRSF PIRSF039137 1 238 6.6E-101 T 12-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 PA257_6188 c57b92fe4ea140fff3294341a8dc91c0 238 Gene3D G3DSA:3.40.50.300 2 238 1.4E-62 T 12-10-2018 PA257_6188 c57b92fe4ea140fff3294341a8dc91c0 238 SMART SM00382 30 203 5.0E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6188 c57b92fe4ea140fff3294341a8dc91c0 238 Pfam PF00005 ABC transporter 21 165 4.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6188 c57b92fe4ea140fff3294341a8dc91c0 238 SUPERFAMILY SSF52540 5 235 7.67E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3337 c85a30b4ce7af4254738aeb8b4751bac 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 283 1.2E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3337 c85a30b4ce7af4254738aeb8b4751bac 288 Gene3D G3DSA:1.10.3720.10 83 280 2.4E-20 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3337 c85a30b4ce7af4254738aeb8b4751bac 288 SUPERFAMILY SSF161098 86 269 1.31E-23 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6682 f9fef3f68673c7392f2bd9884325f37c 642 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 364 523 5.9E-45 T 12-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PA257_6682 f9fef3f68673c7392f2bd9884325f37c 642 Gene3D G3DSA:3.40.1080.20 395 534 5.7E-35 T 12-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily PA257_6682 f9fef3f68673c7392f2bd9884325f37c 642 SUPERFAMILY SSF100950 225 550 3.93E-46 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_0555 57bf284fd971aa0f47aef7b8ea0bcfae 467 Gene3D G3DSA:3.90.1150.10 12 435 3.3E-161 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_0555 57bf284fd971aa0f47aef7b8ea0bcfae 467 Gene3D G3DSA:3.40.640.10 65 342 3.3E-161 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_0555 57bf284fd971aa0f47aef7b8ea0bcfae 467 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 442 6.2E-175 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 PA257_0555 57bf284fd971aa0f47aef7b8ea0bcfae 467 SUPERFAMILY SSF53383 10 442 1.28E-130 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_0555 57bf284fd971aa0f47aef7b8ea0bcfae 467 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 447 49.797 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 PA257_0555 57bf284fd971aa0f47aef7b8ea0bcfae 467 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0555 57bf284fd971aa0f47aef7b8ea0bcfae 467 Pfam PF00202 Aminotransferase class-III 28 439 1.6E-121 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_5467 ef139acd63338d77f90ccd3f595a2213 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 81 2.1E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_5467 ef139acd63338d77f90ccd3f595a2213 211 SUPERFAMILY SSF52833 5 87 1.92E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_5467 ef139acd63338d77f90ccd3f595a2213 211 Pfam PF13410 Glutathione S-transferase, C-terminal domain 131 203 2.1E-6 T 12-10-2018 PA257_5467 ef139acd63338d77f90ccd3f595a2213 211 Gene3D G3DSA:1.20.1050.10 84 194 4.4E-56 T 12-10-2018 PA257_5467 ef139acd63338d77f90ccd3f595a2213 211 Gene3D G3DSA:3.40.30.10 6 200 4.4E-56 T 12-10-2018 PA257_5467 ef139acd63338d77f90ccd3f595a2213 211 SUPERFAMILY SSF47616 84 201 2.52E-13 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_1947 1ce5ea1fca5449f22454ace6d884d44a 442 Pfam PF00668 Condensation domain 220 325 1.9E-5 T 12-10-2018 IPR001242 Condensation domain PA257_1947 1ce5ea1fca5449f22454ace6d884d44a 442 Pfam PF00668 Condensation domain 19 145 1.6E-9 T 12-10-2018 IPR001242 Condensation domain PA257_1947 1ce5ea1fca5449f22454ace6d884d44a 442 Gene3D G3DSA:3.30.559.10 4 174 7.7E-20 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_1947 1ce5ea1fca5449f22454ace6d884d44a 442 SUPERFAMILY SSF52777 191 434 5.56E-37 T 12-10-2018 PA257_1947 1ce5ea1fca5449f22454ace6d884d44a 442 SUPERFAMILY SSF52777 7 157 1.41E-22 T 12-10-2018 PA257_0862 4bcd89502746f1e32bf62eead2c9aa87 454 Gene3D G3DSA:1.20.1250.20 1 385 3.4E-95 T 12-10-2018 PA257_0862 4bcd89502746f1e32bf62eead2c9aa87 454 Gene3D G3DSA:3.30.70.100 386 450 1.1E-22 T 12-10-2018 PA257_0862 4bcd89502746f1e32bf62eead2c9aa87 454 SUPERFAMILY SSF103473 7 387 6.8E-68 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0862 4bcd89502746f1e32bf62eead2c9aa87 454 Pfam PF07690 Major Facilitator Superfamily 13 350 3.8E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6371 bb2622b5cf8b874c64df723b8affeccc 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 9.6E-52 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 PA257_6371 bb2622b5cf8b874c64df723b8affeccc 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.917 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 PA257_6371 bb2622b5cf8b874c64df723b8affeccc 145 SUPERFAMILY SSF69500 1 144 2.75E-54 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily PA257_6371 bb2622b5cf8b874c64df723b8affeccc 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 4.6E-52 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 PA257_6371 bb2622b5cf8b874c64df723b8affeccc 145 Gene3D G3DSA:3.50.80.10 1 145 3.9E-53 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily PA257_3744 15e6a4380bda7d9de21c4c092a31727f 118 Gene3D G3DSA:3.90.1150.30 1 117 1.4E-16 T 12-10-2018 IPR038056 YjbR-like superfamily PA257_3744 15e6a4380bda7d9de21c4c092a31727f 118 Pfam PF04237 YjbR 11 101 1.4E-13 T 12-10-2018 IPR007351 Uncharacterised protein YjbR PA257_3744 15e6a4380bda7d9de21c4c092a31727f 118 SUPERFAMILY SSF142906 1 114 1.03E-28 T 12-10-2018 IPR038056 YjbR-like superfamily PA257_5917 b84d89e736293cd523219dcfaca67edf 295 Gene3D G3DSA:1.10.8.760 159 215 2.5E-68 T 12-10-2018 PA257_5917 b84d89e736293cd523219dcfaca67edf 295 PIRSF PIRSF020419 1 293 2.6E-132 T 12-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted PA257_5917 b84d89e736293cd523219dcfaca67edf 295 Gene3D G3DSA:3.40.50.11550 41 261 2.5E-68 T 12-10-2018 PA257_5917 b84d89e736293cd523219dcfaca67edf 295 SUPERFAMILY SSF159501 35 280 7.32E-69 T 12-10-2018 PA257_5917 b84d89e736293cd523219dcfaca67edf 295 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 53 247 5.1E-44 T 12-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN PA257_4795 c621e57d311f4a0f193c1ae2b16b0f16 497 Pfam PF00171 Aldehyde dehydrogenase family 19 479 1.7E-126 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_4795 c621e57d311f4a0f193c1ae2b16b0f16 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_4795 c621e57d311f4a0f193c1ae2b16b0f16 497 SUPERFAMILY SSF53720 18 484 4.97E-130 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_4795 c621e57d311f4a0f193c1ae2b16b0f16 497 Gene3D G3DSA:3.40.309.10 256 449 2.4E-136 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_4795 c621e57d311f4a0f193c1ae2b16b0f16 497 Gene3D G3DSA:3.40.605.10 22 474 2.4E-136 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 Pfam PF16921 Tex protein YqgF-like domain 330 455 3.7E-53 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 Gene3D G3DSA:1.10.10.650 1 114 1.4E-45 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 Gene3D G3DSA:2.40.50.140 635 730 9.6E-31 T 12-10-2018 PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 SMART SM00732 329 428 4.2E-41 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 SUPERFAMILY SSF50249 642 729 1.72E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 Pfam PF00575 S1 RNA binding domain 653 724 2.5E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 Pfam PF09371 Tex-like protein N-terminal domain 20 197 2.5E-63 T 12-10-2018 IPR018974 Tex-like protein, N-terminal PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 Pfam PF12836 Helix-hairpin-helix motif 495 559 4.5E-29 T 12-10-2018 PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 Gene3D G3DSA:1.10.3500.10 117 502 1.2E-160 T 12-10-2018 IPR023323 Tex-like domain superfamily PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 Gene3D G3DSA:3.30.420.140 328 455 1.2E-160 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 SMART SM00316 653 724 1.6E-24 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 Gene3D G3DSA:1.10.150.310 503 634 2.7E-52 T 12-10-2018 PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 SUPERFAMILY SSF47781 564 636 1.78E-20 T 12-10-2018 IPR010994 RuvA domain 2-like PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 SUPERFAMILY SSF53098 325 473 4.32E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 SUPERFAMILY SSF47781 474 560 4.45E-28 T 12-10-2018 IPR010994 RuvA domain 2-like PA257_6553 324a43b51a668ba36dc2780df486dcd1 779 SUPERFAMILY SSF158832 4 324 2.75E-116 T 12-10-2018 PA257_0223 ec66f37672e7e745397fd116ae8a6e35 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 7.2E-43 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PA257_0223 ec66f37672e7e745397fd116ae8a6e35 372 SMART SM01003 4 136 7.4E-69 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PA257_0223 ec66f37672e7e745397fd116ae8a6e35 372 SUPERFAMILY SSF51735 136 317 2.69E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0223 ec66f37672e7e745397fd116ae8a6e35 372 SMART SM01002 145 314 7.9E-85 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PA257_0223 ec66f37672e7e745397fd116ae8a6e35 372 Gene3D G3DSA:3.40.50.720 3 366 1.4E-141 T 12-10-2018 PA257_0223 ec66f37672e7e745397fd116ae8a6e35 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 369 1.9E-73 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PA257_0223 ec66f37672e7e745397fd116ae8a6e35 372 Gene3D G3DSA:3.40.50.720 136 321 1.4E-141 T 12-10-2018 PA257_0223 ec66f37672e7e745397fd116ae8a6e35 372 SUPERFAMILY SSF52283 2 167 4.0E-51 T 12-10-2018 PA257_5944 a18ae08b073e9c1e43c352003996b29d 283 SUPERFAMILY SSF52374 1 281 3.94E-107 T 12-10-2018 PA257_5944 a18ae08b073e9c1e43c352003996b29d 283 Gene3D G3DSA:3.30.1300.10 179 283 1.2E-29 T 12-10-2018 PA257_5944 a18ae08b073e9c1e43c352003996b29d 283 Gene3D G3DSA:3.40.50.620 1 178 2.8E-78 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_5944 a18ae08b073e9c1e43c352003996b29d 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 68 5.1E-7 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PA257_5944 a18ae08b073e9c1e43c352003996b29d 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 41.598 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 PA257_5944 a18ae08b073e9c1e43c352003996b29d 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.6E-103 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 PA257_5944 a18ae08b073e9c1e43c352003996b29d 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 2.6E-102 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 PA257_6777 2902b9605fe4132781f6ae87c098b5af 297 SUPERFAMILY SSF53850 91 295 7.97E-46 T 12-10-2018 PA257_6777 2902b9605fe4132781f6ae87c098b5af 297 Gene3D G3DSA:3.40.190.290 92 294 1.1E-41 T 12-10-2018 PA257_6777 2902b9605fe4132781f6ae87c098b5af 297 Pfam PF03466 LysR substrate binding domain 88 293 4.4E-49 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6777 2902b9605fe4132781f6ae87c098b5af 297 Gene3D G3DSA:1.10.10.10 1 87 5.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6777 2902b9605fe4132781f6ae87c098b5af 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.3E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6777 2902b9605fe4132781f6ae87c098b5af 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6777 2902b9605fe4132781f6ae87c098b5af 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6777 2902b9605fe4132781f6ae87c098b5af 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6777 2902b9605fe4132781f6ae87c098b5af 297 SUPERFAMILY SSF46785 2 112 7.08E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 Pfam PF07724 AAA domain (Cdc48 subfamily) 609 774 8.1E-42 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 SUPERFAMILY SSF52540 558 855 1.75E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 863 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 643 661 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 SUPERFAMILY SSF81923 18 126 1.04E-10 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 Gene3D G3DSA:3.40.50.300 353 556 4.4E-48 T 12-10-2018 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 208 339 7.2E-10 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 Gene3D G3DSA:3.40.50.300 163 352 3.5E-64 T 12-10-2018 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 SUPERFAMILY SSF52540 165 542 8.57E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 Gene3D G3DSA:3.40.50.300 562 778 2.0E-65 T 12-10-2018 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 Gene3D G3DSA:1.10.8.60 783 872 1.2E-11 T 12-10-2018 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 SMART SM01086 780 872 1.2E-8 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 2.0E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 2.0E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 734 2.0E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 676 2.0E-33 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 299 311 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 Gene3D G3DSA:1.10.1780.10 5 150 3.3E-29 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 785 854 7.3E-11 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 SMART SM00382 609 770 2.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 SMART SM00382 203 348 2.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4113 975432202c1cd80dc1bfc32fc2bbe83e 875 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 27 73 3.1E-4 T 12-10-2018 IPR004176 Clp, N-terminal PA257_6428 672c2f59b418df00fbbabc099caf4df0 436 Gene3D G3DSA:3.30.750.44 51 344 6.4E-98 T 12-10-2018 PA257_6428 672c2f59b418df00fbbabc099caf4df0 436 Gene3D G3DSA:2.30.42.10 105 191 6.4E-98 T 12-10-2018 PA257_6428 672c2f59b418df00fbbabc099caf4df0 436 Pfam PF03572 Peptidase family S41 203 368 1.3E-57 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 PA257_6428 672c2f59b418df00fbbabc099caf4df0 436 SUPERFAMILY SSF50156 97 178 8.87E-20 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 PA257_6428 672c2f59b418df00fbbabc099caf4df0 436 SMART SM00245 177 369 1.8E-75 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 PA257_6428 672c2f59b418df00fbbabc099caf4df0 436 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 59 376 8.5E-106 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PA257_6428 672c2f59b418df00fbbabc099caf4df0 436 SMART SM00228 105 176 1.6E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_6428 672c2f59b418df00fbbabc099caf4df0 436 Pfam PF13180 PDZ domain 105 177 1.5E-11 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_6428 672c2f59b418df00fbbabc099caf4df0 436 Gene3D G3DSA:3.90.226.10 192 366 6.4E-98 T 12-10-2018 PA257_6428 672c2f59b418df00fbbabc099caf4df0 436 SUPERFAMILY SSF52096 42 370 1.06E-82 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_3298 0da3abd188f1441f74eac9cec5d59cd8 411 SUPERFAMILY SSF56645 33 234 1.3E-44 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_3298 0da3abd188f1441f74eac9cec5d59cd8 411 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 132 3.8E-9 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_3298 0da3abd188f1441f74eac9cec5d59cd8 411 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 252 386 1.6E-21 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PA257_3298 0da3abd188f1441f74eac9cec5d59cd8 411 Gene3D G3DSA:1.10.540.10 27 133 1.4E-20 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_3298 0da3abd188f1441f74eac9cec5d59cd8 411 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 226 7.6E-10 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_3298 0da3abd188f1441f74eac9cec5d59cd8 411 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 20 411 6.8E-178 T 12-10-2018 IPR023922 Sulphate-starvation-induced SfnB PA257_3298 0da3abd188f1441f74eac9cec5d59cd8 411 SUPERFAMILY SSF47203 249 409 2.42E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_3298 0da3abd188f1441f74eac9cec5d59cd8 411 Gene3D G3DSA:1.20.140.10 235 409 2.4E-53 T 12-10-2018 PA257_3298 0da3abd188f1441f74eac9cec5d59cd8 411 PIRSF PIRSF016578 19 402 8.4E-27 T 12-10-2018 PA257_3298 0da3abd188f1441f74eac9cec5d59cd8 411 Gene3D G3DSA:2.40.110.10 135 234 3.1E-27 T 12-10-2018 PA257_4010 77b3a80ecdcce5daf4ac17377993b26c 253 Pfam PF03412 Peptidase C39 family 57 192 2.5E-20 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PA257_4010 77b3a80ecdcce5daf4ac17377993b26c 253 Gene3D G3DSA:3.90.70.10 48 201 3.3E-32 T 12-10-2018 PA257_0848 11101dbfa1b79ca4a696cbadbf89c886 116 SUPERFAMILY SSF53137 4 114 3.71E-52 T 12-10-2018 PA257_0848 11101dbfa1b79ca4a696cbadbf89c886 116 Gene3D G3DSA:3.30.420.100 3 116 7.6E-43 T 12-10-2018 PA257_0848 11101dbfa1b79ca4a696cbadbf89c886 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 2.9E-42 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0848 11101dbfa1b79ca4a696cbadbf89c886 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 116 1.1E-42 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0848 11101dbfa1b79ca4a696cbadbf89c886 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 27.195 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5814 27f30ddac53607428588da0c9735069d 147 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 7 135 2.1E-42 T 12-10-2018 IPR011721 Conserved hypothetical protein CHP02096 PA257_5814 27f30ddac53607428588da0c9735069d 147 Gene3D G3DSA:3.10.450.50 4 142 9.0E-23 T 12-10-2018 PA257_5814 27f30ddac53607428588da0c9735069d 147 Pfam PF07366 SnoaL-like polyketide cyclase 15 134 3.7E-13 T 12-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 PA257_5814 27f30ddac53607428588da0c9735069d 147 SUPERFAMILY SSF54427 3 141 1.2E-24 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_1713 d1392a2137f209d97275419f6e8d4a34 628 Gene3D G3DSA:3.30.300.30 496 625 9.4E-26 T 12-10-2018 PA257_1713 d1392a2137f209d97275419f6e8d4a34 628 SUPERFAMILY SSF56801 3 623 1.22E-156 T 12-10-2018 PA257_1713 d1392a2137f209d97275419f6e8d4a34 628 Gene3D G3DSA:3.40.50.12780 35 493 7.4E-103 T 12-10-2018 PA257_1713 d1392a2137f209d97275419f6e8d4a34 628 Pfam PF00501 AMP-binding enzyme 64 500 3.5E-85 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_1713 d1392a2137f209d97275419f6e8d4a34 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 588 9.2E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_1713 d1392a2137f209d97275419f6e8d4a34 628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_1713 d1392a2137f209d97275419f6e8d4a34 628 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 56 3.4E-13 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 PA257_4755 8f6b3bc40192091e2e71b45bf5604b4c 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4755 8f6b3bc40192091e2e71b45bf5604b4c 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 2.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4755 8f6b3bc40192091e2e71b45bf5604b4c 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 2.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4755 8f6b3bc40192091e2e71b45bf5604b4c 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 2.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4755 8f6b3bc40192091e2e71b45bf5604b4c 199 Gene3D G3DSA:3.40.50.720 1 199 9.6E-37 T 12-10-2018 PA257_4755 8f6b3bc40192091e2e71b45bf5604b4c 199 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 26 172 3.1E-13 T 12-10-2018 PA257_4755 8f6b3bc40192091e2e71b45bf5604b4c 199 SUPERFAMILY SSF51735 2 197 3.69E-24 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6505 a07b868bee0e0904e06620a6e640bd57 122 SUPERFAMILY SSF88697 2 119 5.96E-19 T 12-10-2018 IPR015947 PUA-like superfamily PA257_6505 a07b868bee0e0904e06620a6e640bd57 122 Pfam PF04266 ASCH domain 4 84 1.4E-8 T 12-10-2018 IPR007374 ASCH domain PA257_6505 a07b868bee0e0904e06620a6e640bd57 122 Gene3D G3DSA:2.30.130.30 1 122 1.0E-27 T 12-10-2018 PA257_5770 77b0242ed108241fb9d6b3d8920b3455 425 Gene3D G3DSA:2.40.50.100 66 274 1.8E-40 T 12-10-2018 PA257_5770 77b0242ed108241fb9d6b3d8920b3455 425 Gene3D G3DSA:1.10.287.470 100 229 1.8E-40 T 12-10-2018 PA257_5770 77b0242ed108241fb9d6b3d8920b3455 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 314 1.2E-11 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_5770 77b0242ed108241fb9d6b3d8920b3455 425 Gene3D G3DSA:2.40.420.20 54 409 1.8E-40 T 12-10-2018 PA257_5770 77b0242ed108241fb9d6b3d8920b3455 425 SUPERFAMILY SSF111369 56 127 1.96E-7 T 12-10-2018 PA257_5770 77b0242ed108241fb9d6b3d8920b3455 425 Gene3D G3DSA:2.40.30.170 55 360 1.8E-40 T 12-10-2018 PA257_1667 d9f0244e86515e0ba89b18e2f3c1c788 359 Pfam PF00005 ABC transporter 17 159 7.6E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1667 d9f0244e86515e0ba89b18e2f3c1c788 359 SUPERFAMILY SSF52540 1 239 4.82E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1667 d9f0244e86515e0ba89b18e2f3c1c788 359 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1667 d9f0244e86515e0ba89b18e2f3c1c788 359 Gene3D G3DSA:2.40.50.100 279 329 1.2E-5 T 12-10-2018 PA257_1667 d9f0244e86515e0ba89b18e2f3c1c788 359 Pfam PF08402 TOBE domain 276 356 7.9E-16 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PA257_1667 d9f0244e86515e0ba89b18e2f3c1c788 359 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 32 352 1.9E-117 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PA257_1667 d9f0244e86515e0ba89b18e2f3c1c788 359 SMART SM00382 26 209 6.2E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1667 d9f0244e86515e0ba89b18e2f3c1c788 359 Gene3D G3DSA:3.40.50.300 1 236 3.7E-77 T 12-10-2018 PA257_1667 d9f0244e86515e0ba89b18e2f3c1c788 359 Gene3D G3DSA:2.40.50.140 237 278 1.2E-5 T 12-10-2018 PA257_1667 d9f0244e86515e0ba89b18e2f3c1c788 359 SUPERFAMILY SSF50331 235 356 1.81E-17 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_3940 bd490b269c28cf3d8030faf669ecfb80 451 Pfam PF13520 Amino acid permease 13 410 5.7E-54 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_3940 bd490b269c28cf3d8030faf669ecfb80 451 Gene3D G3DSA:1.20.1740.10 6 446 7.4E-89 T 12-10-2018 PA257_3940 bd490b269c28cf3d8030faf669ecfb80 451 PIRSF PIRSF006060 2 450 5.4E-72 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_4044 fe12709c82cf7e05351be7dc48a4b062 470 Gene3D G3DSA:3.40.50.11290 207 305 1.2E-43 T 12-10-2018 PA257_4044 fe12709c82cf7e05351be7dc48a4b062 470 PIRSF PIRSF005522 1 470 3.2E-231 T 12-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 PA257_4044 fe12709c82cf7e05351be7dc48a4b062 470 Pfam PF14403 Circularly permuted ATP-grasp type 2 72 446 2.2E-165 T 12-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 PA257_4044 fe12709c82cf7e05351be7dc48a4b062 470 SUPERFAMILY SSF56059 15 461 1.94E-63 T 12-10-2018 PA257_4044 fe12709c82cf7e05351be7dc48a4b062 470 Gene3D G3DSA:3.30.1490.270 342 402 1.7E-25 T 12-10-2018 PA257_1846 064c73e8df719c77f4a3bf1db3af6581 114 Pfam PF05899 Protein of unknown function (DUF861) 37 109 6.9E-29 T 12-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PA257_1846 064c73e8df719c77f4a3bf1db3af6581 114 SUPERFAMILY SSF51182 19 112 6.53E-17 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_1846 064c73e8df719c77f4a3bf1db3af6581 114 Gene3D G3DSA:2.60.120.10 2 114 1.5E-27 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_6136 482299e106224806c64089c1bc9193c4 529 Gene3D G3DSA:1.25.10.110 161 229 4.1E-6 T 12-10-2018 PA257_6136 482299e106224806c64089c1bc9193c4 529 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 235 526 1.0E-132 T 12-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type PA257_6136 482299e106224806c64089c1bc9193c4 529 Pfam PF02653 Branched-chain amino acid transport system / permease component 237 512 2.1E-54 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PA257_6136 482299e106224806c64089c1bc9193c4 529 Pfam PF13646 HEAT repeats 172 226 1.8E-6 T 12-10-2018 PA257_6136 482299e106224806c64089c1bc9193c4 529 SUPERFAMILY SSF48371 125 225 4.03E-7 T 12-10-2018 IPR016024 Armadillo-type fold PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 SUPERFAMILY SSF53244 311 448 5.49E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 Pfam PF08245 Mur ligase middle domain 108 291 8.4E-22 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 Gene3D G3DSA:3.40.1190.10 91 313 1.6E-55 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 360 1.1E-8 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 Gene3D G3DSA:3.40.50.720 1 90 1.3E-36 T 12-10-2018 PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 SUPERFAMILY SSF53623 94 308 1.57E-52 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 60.768 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 Pfam PF01225 Mur ligase family, catalytic domain 2 100 6.1E-19 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 SUPERFAMILY SSF51984 1 90 1.57E-23 T 12-10-2018 PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.7E-215 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 PA257_1132 032c22f09a626daf4831fe3da023f7fb 451 Gene3D G3DSA:3.90.190.20 314 451 4.5E-26 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_6688 67912fcf02836d2ba5f5000b6223496a 114 Pfam PF07027 Protein of unknown function (DUF1318) 28 114 2.1E-26 T 12-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 PA257_6688 67912fcf02836d2ba5f5000b6223496a 114 PIRSF PIRSF025560 2 114 1.3E-30 T 12-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 PA257_5021 a19533a5a9d9274d1a19d27451405161 277 PIRSF PIRSF007580 1 277 1.8E-100 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 PA257_5021 a19533a5a9d9274d1a19d27451405161 277 Pfam PF10118 Predicted metal-dependent hydrolase 13 257 9.8E-89 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 Pfam PF00455 DeoR C terminal sensor domain 75 231 2.8E-53 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.0E-21 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.9E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.9E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 SUPERFAMILY SSF100950 74 232 4.95E-31 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 SMART SM01134 72 232 2.3E-72 T 12-10-2018 PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 Gene3D G3DSA:1.10.10.10 1 55 2.8E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 SUPERFAMILY SSF46785 3 68 2.46E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 Gene3D G3DSA:3.30.750.70 68 131 4.8E-8 T 12-10-2018 PA257_1692 26da6b4f0ec1b2dbc7986512057e689f 251 SMART SM00420 6 58 3.9E-22 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_4625 e43ba5ecb2b3af63228f013bafdfba36 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 203 5.0E-48 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_4625 e43ba5ecb2b3af63228f013bafdfba36 333 Pfam PF12833 Helix-turn-helix domain 252 329 7.9E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4625 e43ba5ecb2b3af63228f013bafdfba36 333 SMART SM00342 245 328 1.7E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4625 e43ba5ecb2b3af63228f013bafdfba36 333 Gene3D G3DSA:1.10.10.60 228 333 2.4E-26 T 12-10-2018 PA257_4625 e43ba5ecb2b3af63228f013bafdfba36 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 6.1E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4625 e43ba5ecb2b3af63228f013bafdfba36 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 6.1E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4625 e43ba5ecb2b3af63228f013bafdfba36 333 SUPERFAMILY SSF46689 281 330 1.43E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 Gene3D G3DSA:1.20.5.100 203 234 1.6E-17 T 12-10-2018 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 4.8E-135 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 SUPERFAMILY SSF52413 311 435 6.67E-41 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 PIRSF PIRSF000124 1 439 4.4E-142 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 4.7E-60 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 SUPERFAMILY SSF51735 1 195 1.15E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 Gene3D G3DSA:3.40.50.720 235 453 3.8E-78 T 12-10-2018 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 SUPERFAMILY SSF48179 204 301 1.5E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 Gene3D G3DSA:3.40.50.720 1 202 1.4E-74 T 12-10-2018 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 SMART SM00984 320 424 2.3E-51 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 3.5E-36 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 1.8E-31 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PA257_1723 e2757bcff72aead7610be9b5940b43bd 464 PIRSF PIRSF500134 1 442 6.1E-182 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 PA257_4462 feb36f5d1c5094256a711aae1056fc02 207 SUPERFAMILY SSF53335 16 203 3.73E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_4462 feb36f5d1c5094256a711aae1056fc02 207 Gene3D G3DSA:3.40.50.150 3 207 1.3E-38 T 12-10-2018 PA257_4462 feb36f5d1c5094256a711aae1056fc02 207 Pfam PF13489 Methyltransferase domain 32 179 1.0E-14 T 12-10-2018 PA257_4875 87366b4bbf4a500df7a09d80abdc4cc0 156 ProSitePatterns PS00818 Dps protein family signature 1. 37 53 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 PA257_4875 87366b4bbf4a500df7a09d80abdc4cc0 156 PIRSF PIRSF005900 1 156 9.1E-47 T 12-10-2018 IPR002177 DNA-binding protein Dps PA257_4875 87366b4bbf4a500df7a09d80abdc4cc0 156 SUPERFAMILY SSF47240 4 155 7.31E-48 T 12-10-2018 IPR009078 Ferritin-like superfamily PA257_4875 87366b4bbf4a500df7a09d80abdc4cc0 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 6.3E-12 T 12-10-2018 IPR002177 DNA-binding protein Dps PA257_4875 87366b4bbf4a500df7a09d80abdc4cc0 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 132 150 6.3E-12 T 12-10-2018 IPR002177 DNA-binding protein Dps PA257_4875 87366b4bbf4a500df7a09d80abdc4cc0 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 6.3E-12 T 12-10-2018 IPR002177 DNA-binding protein Dps PA257_4875 87366b4bbf4a500df7a09d80abdc4cc0 156 ProSitePatterns PS00819 Dps protein family signature 2. 63 77 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 PA257_4875 87366b4bbf4a500df7a09d80abdc4cc0 156 Pfam PF00210 Ferritin-like domain 17 155 3.1E-28 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PA257_4875 87366b4bbf4a500df7a09d80abdc4cc0 156 Gene3D G3DSA:1.20.1260.10 1 155 8.9E-58 T 12-10-2018 IPR012347 Ferritin-like PA257_1529 c7334f30fe12aef19c01ffca434295a5 261 PRINTS PR01021 OMPA domain signature 191 207 1.3E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_1529 c7334f30fe12aef19c01ffca434295a5 261 PRINTS PR01021 OMPA domain signature 146 168 1.3E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_1529 c7334f30fe12aef19c01ffca434295a5 261 PRINTS PR01021 OMPA domain signature 176 191 1.3E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_1529 c7334f30fe12aef19c01ffca434295a5 261 Pfam PF00691 OmpA family 145 240 1.1E-24 T 12-10-2018 IPR006665 OmpA-like domain PA257_1529 c7334f30fe12aef19c01ffca434295a5 261 Pfam PF14346 Domain of unknown function (DUF4398) 14 113 2.4E-14 T 12-10-2018 IPR025511 Domain of unknown function DUF4398 PA257_1529 c7334f30fe12aef19c01ffca434295a5 261 Gene3D G3DSA:3.30.1330.60 106 252 6.1E-44 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_1529 c7334f30fe12aef19c01ffca434295a5 261 ProSitePatterns PS01068 OmpA-like domain. 178 222 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PA257_1529 c7334f30fe12aef19c01ffca434295a5 261 SUPERFAMILY SSF103088 137 246 2.62E-39 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_5030 29d0fd6f4b4d51161f0a0dfc3ff0d684 233 Pfam PF05100 Phage minor tail protein L 24 228 1.0E-62 T 12-10-2018 IPR006487 Bacteriophage lambda, GpL, minor tail PA257_5030 29d0fd6f4b4d51161f0a0dfc3ff0d684 233 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 6 227 2.7E-63 T 12-10-2018 IPR006487 Bacteriophage lambda, GpL, minor tail PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 SUPERFAMILY SSF48173 194 468 2.22E-108 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 PRINTS PR00147 DNA photolyase signature 384 398 1.1E-22 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 PRINTS PR00147 DNA photolyase signature 325 341 1.1E-22 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 PRINTS PR00147 DNA photolyase signature 345 363 1.1E-22 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 Gene3D G3DSA:3.40.50.620 3 202 4.4E-83 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 Pfam PF00875 DNA photolyase 3 166 1.0E-43 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 Gene3D G3DSA:1.25.40.80 132 286 4.4E-83 T 12-10-2018 PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 Gene3D G3DSA:1.10.579.10 293 470 1.3E-78 T 12-10-2018 PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 Pfam PF03441 FAD binding domain of DNA photolyase 275 467 1.0E-81 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 PA257_5846 de1db59dcd5e07a3cd560adf234490d6 476 SUPERFAMILY SSF52425 2 185 2.22E-50 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 PA257_6900 f39b2fc03d9319e97053cf254b469b03 167 Pfam PF01475 Ferric uptake regulator family 35 154 1.3E-11 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PA257_6900 f39b2fc03d9319e97053cf254b469b03 167 Gene3D G3DSA:1.10.10.10 17 105 1.2E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6900 f39b2fc03d9319e97053cf254b469b03 167 Gene3D G3DSA:3.30.1490.190 106 166 1.4E-14 T 12-10-2018 PA257_6900 f39b2fc03d9319e97053cf254b469b03 167 SUPERFAMILY SSF46785 29 159 4.25E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3246 300db654670b86b96fd4ef6b7dfd82e1 427 Pfam PF00266 Aminotransferase class-V 65 387 2.8E-30 T 12-10-2018 IPR000192 Aminotransferase class V domain PA257_3246 300db654670b86b96fd4ef6b7dfd82e1 427 Gene3D G3DSA:3.40.640.10 65 330 9.8E-71 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_3246 300db654670b86b96fd4ef6b7dfd82e1 427 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 255 275 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PA257_3246 300db654670b86b96fd4ef6b7dfd82e1 427 Gene3D G3DSA:3.90.1150.10 54 418 9.8E-71 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_3246 300db654670b86b96fd4ef6b7dfd82e1 427 SUPERFAMILY SSF53383 40 423 2.89E-67 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6354 9a074bb9ba9a8da69edd38438975a1d2 91 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 91 2.0E-36 T 12-10-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein PA257_6354 9a074bb9ba9a8da69edd38438975a1d2 91 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 4 90 4.9E-35 T 12-10-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein PA257_3574 225e4f2f2cc6af266e266272726823fc 728 SUPERFAMILY SSF51011 626 726 3.6E-29 T 12-10-2018 PA257_3574 225e4f2f2cc6af266e266272726823fc 728 Pfam PF00128 Alpha amylase, catalytic domain 276 347 6.5E-9 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3574 225e4f2f2cc6af266e266272726823fc 728 Gene3D G3DSA:2.60.40.10 5 221 2.1E-68 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3574 225e4f2f2cc6af266e266272726823fc 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 126 208 2.2E-22 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 PA257_3574 225e4f2f2cc6af266e266272726823fc 728 SUPERFAMILY SSF81296 17 115 2.2E-15 T 12-10-2018 IPR014756 Immunoglobulin E-set PA257_3574 225e4f2f2cc6af266e266272726823fc 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 629 725 3.4E-21 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 PA257_3574 225e4f2f2cc6af266e266272726823fc 728 SUPERFAMILY SSF51445 181 617 2.59E-116 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_3574 225e4f2f2cc6af266e266272726823fc 728 SUPERFAMILY SSF81296 139 196 5.53E-10 T 12-10-2018 IPR014756 Immunoglobulin E-set PA257_3574 225e4f2f2cc6af266e266272726823fc 728 SMART SM00642 252 620 7.6E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3574 225e4f2f2cc6af266e266272726823fc 728 Gene3D G3DSA:3.20.20.80 226 623 3.6E-164 T 12-10-2018 PA257_3574 225e4f2f2cc6af266e266272726823fc 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 110 725 8.9E-274 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 PA257_3574 225e4f2f2cc6af266e266272726823fc 728 PIRSF PIRSF000463 8 728 2.3E-280 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 PA257_3574 225e4f2f2cc6af266e266272726823fc 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 102 727 44.587 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 PA257_3574 225e4f2f2cc6af266e266272726823fc 728 Gene3D G3DSA:2.60.40.1180 625 727 1.2E-32 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta PA257_3140 8f55d70b75136f3ca4a72212b36dbb76 100 SUPERFAMILY SSF160059 26 91 2.48E-15 T 12-10-2018 PA257_0494 8f55d70b75136f3ca4a72212b36dbb76 100 SUPERFAMILY SSF160059 26 91 2.48E-15 T 12-10-2018 PA257_0308 2a126e0a201d25f8b68f561ae82b0a22 276 Pfam PF00905 Penicillin binding protein transpeptidase domain 44 261 5.1E-43 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PA257_0308 2a126e0a201d25f8b68f561ae82b0a22 276 Gene3D G3DSA:3.40.710.10 26 276 1.8E-102 T 12-10-2018 PA257_0308 2a126e0a201d25f8b68f561ae82b0a22 276 ProSitePatterns PS00337 Beta-lactamase class-D active site. 69 79 - T 12-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 PA257_0308 2a126e0a201d25f8b68f561ae82b0a22 276 SUPERFAMILY SSF56601 28 275 3.5E-36 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_4390 542a9a90a2ae5ad6479b3ddb4d73d911 651 Gene3D G3DSA:3.40.50.300 465 647 2.3E-13 T 12-10-2018 PA257_4390 542a9a90a2ae5ad6479b3ddb4d73d911 651 Gene3D G3DSA:3.40.50.300 110 268 2.7E-18 T 12-10-2018 PA257_4390 542a9a90a2ae5ad6479b3ddb4d73d911 651 Gene3D G3DSA:3.40.50.300 331 461 3.3E-18 T 12-10-2018 PA257_4390 542a9a90a2ae5ad6479b3ddb4d73d911 651 Pfam PF00580 UvrD/REP helicase N-terminal domain 117 450 2.1E-25 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PA257_4390 542a9a90a2ae5ad6479b3ddb4d73d911 651 SUPERFAMILY SSF52540 113 634 1.77E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5850 895f6555ecc86064af5f5f25b6f0fb68 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 18 276 8.1E-78 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PA257_5850 895f6555ecc86064af5f5f25b6f0fb68 276 Gene3D G3DSA:1.10.8.10 8 83 2.9E-21 T 12-10-2018 PA257_5850 895f6555ecc86064af5f5f25b6f0fb68 276 SUPERFAMILY SSF53335 12 272 1.13E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5850 895f6555ecc86064af5f5f25b6f0fb68 276 Pfam PF05175 Methyltransferase small domain 94 185 8.6E-15 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PA257_5850 895f6555ecc86064af5f5f25b6f0fb68 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 274 46.499 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PA257_5850 895f6555ecc86064af5f5f25b6f0fb68 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_5850 895f6555ecc86064af5f5f25b6f0fb68 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 22 270 3.2E-89 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PA257_5850 895f6555ecc86064af5f5f25b6f0fb68 276 Gene3D G3DSA:3.40.50.150 84 275 2.9E-60 T 12-10-2018 PA257_2660 6995e5b0529e6b6341737cbfc4d5f7ed 207 SUPERFAMILY SSF54001 3 144 1.04E-20 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_2660 6995e5b0529e6b6341737cbfc4d5f7ed 207 Gene3D G3DSA:3.10.620.30 1 137 7.1E-11 T 12-10-2018 PA257_2660 6995e5b0529e6b6341737cbfc4d5f7ed 207 Pfam PF01841 Transglutaminase-like superfamily 5 120 7.4E-16 T 12-10-2018 IPR002931 Transglutaminase-like PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 Pfam PF01011 PQQ enzyme repeat 532 568 1.2E-10 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 34 586 2.4E-238 T 12-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 282 303 - T 12-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 51 79 - T 12-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 Pfam PF13360 PQQ-like domain 82 339 1.1E-16 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 SMART SM00564 147 178 1.4E-5 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 SMART SM00564 452 517 540.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 SMART SM00564 97 129 8.2E-8 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 SMART SM00564 361 397 470.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 SMART SM00564 527 558 6.8E-7 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 SMART SM00564 192 235 200.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 SUPERFAMILY SSF50998 46 609 8.11E-149 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PA257_3758 61f2a5f0426372d53c20b69d54a65c1f 623 Gene3D G3DSA:2.140.10.10 35 616 4.0E-259 T 12-10-2018 PA257_2934 5cb3030ee4bf9d296458b03d10aeec9c 78 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 1 73 9.2E-32 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 PA257_2934 5cb3030ee4bf9d296458b03d10aeec9c 78 SUPERFAMILY SSF54736 1 76 1.36E-29 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PA257_2934 5cb3030ee4bf9d296458b03d10aeec9c 78 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 1 72 23.625 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PA257_2934 5cb3030ee4bf9d296458b03d10aeec9c 78 Gene3D G3DSA:3.30.1390.10 1 78 4.3E-38 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PA257_4197 1160597cf794a7a400d4235626f4b653 409 Pfam PF00364 Biotin-requiring enzyme 4 76 3.3E-19 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_4197 1160597cf794a7a400d4235626f4b653 409 Pfam PF02817 e3 binding domain 112 145 7.1E-16 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 PA257_4197 1160597cf794a7a400d4235626f4b653 409 SUPERFAMILY SSF52777 179 408 1.33E-86 T 12-10-2018 PA257_4197 1160597cf794a7a400d4235626f4b653 409 SUPERFAMILY SSF51230 1 96 6.41E-26 T 12-10-2018 IPR011053 Single hybrid motif PA257_4197 1160597cf794a7a400d4235626f4b653 409 Gene3D G3DSA:3.30.559.10 176 409 5.6E-93 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_4197 1160597cf794a7a400d4235626f4b653 409 Gene3D G3DSA:4.10.320.10 113 154 3.9E-17 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PA257_4197 1160597cf794a7a400d4235626f4b653 409 SUPERFAMILY SSF47005 105 150 1.7E-12 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PA257_4197 1160597cf794a7a400d4235626f4b653 409 Gene3D G3DSA:2.40.50.100 2 102 1.5E-20 T 12-10-2018 PA257_4197 1160597cf794a7a400d4235626f4b653 409 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 409 2.7E-188 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PA257_4197 1160597cf794a7a400d4235626f4b653 409 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 179 407 3.0E-79 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 PA257_4197 1160597cf794a7a400d4235626f4b653 409 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PA257_0851 9ee0dfc2dc9d75f4204ee975321e1eef 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.2E-27 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P PA257_0851 9ee0dfc2dc9d75f4204ee975321e1eef 144 SUPERFAMILY SSF52080 4 142 3.27E-42 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily PA257_0851 9ee0dfc2dc9d75f4204ee975321e1eef 144 Gene3D G3DSA:3.100.10.10 67 144 1.1E-13 T 12-10-2018 PA257_0851 9ee0dfc2dc9d75f4204ee975321e1eef 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 2.2E-43 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0851 9ee0dfc2dc9d75f4204ee975321e1eef 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 17.582 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 PA257_0851 9ee0dfc2dc9d75f4204ee975321e1eef 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_2040 560f2fb4433ba7c34668749bd5b14351 238 SMART SM00345 12 71 3.3E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_2040 560f2fb4433ba7c34668749bd5b14351 238 SUPERFAMILY SSF46785 5 78 8.65E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2040 560f2fb4433ba7c34668749bd5b14351 238 SMART SM00866 92 231 1.9E-29 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_2040 560f2fb4433ba7c34668749bd5b14351 238 Gene3D G3DSA:1.10.10.10 6 76 2.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2040 560f2fb4433ba7c34668749bd5b14351 238 SUPERFAMILY SSF64288 59 235 5.81E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_2040 560f2fb4433ba7c34668749bd5b14351 238 Pfam PF07702 UTRA domain 92 230 1.0E-37 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_2040 560f2fb4433ba7c34668749bd5b14351 238 Gene3D G3DSA:3.40.1410.10 82 235 1.8E-34 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_2040 560f2fb4433ba7c34668749bd5b14351 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 5.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_2040 560f2fb4433ba7c34668749bd5b14351 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 5.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_2040 560f2fb4433ba7c34668749bd5b14351 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 6.5E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 256 277 1.7E-10 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 1.7E-10 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 288 312 1.7E-10 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 360 375 1.7E-10 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 Gene3D G3DSA:1.10.287.470 98 138 5.9E-12 T 12-10-2018 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 SUPERFAMILY SSF111369 189 296 1.31E-10 T 12-10-2018 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 Pfam PF13437 HlyD family secretion protein 245 363 5.6E-13 T 12-10-2018 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 SUPERFAMILY SSF111369 63 137 7.59E-9 T 12-10-2018 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 Pfam PF13533 Biotin-lipoyl like 65 109 3.6E-11 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 Gene3D G3DSA:2.40.50.100 65 97 5.9E-12 T 12-10-2018 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 Gene3D G3DSA:1.10.287.470 139 204 1.1E-5 T 12-10-2018 PA257_4564 b1111cb38bcb2c68e553d4685f66a478 383 Gene3D G3DSA:2.40.30.170 259 377 2.9E-34 T 12-10-2018 PA257_4149 7350e3dbd7e7924bc5c010055293ffd2 564 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 562 35.523 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PA257_4149 7350e3dbd7e7924bc5c010055293ffd2 564 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 3 562 1.1E-230 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PA257_4149 7350e3dbd7e7924bc5c010055293ffd2 564 Pfam PF03814 Potassium-transporting ATPase A subunit 11 560 1.4E-245 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PA257_4149 7350e3dbd7e7924bc5c010055293ffd2 564 PIRSF PIRSF001294 1 564 5.5E-244 T 12-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PA257_0068 e11c6c96e193abc2312eca9c7c26c941 553 SUPERFAMILY SSF53182 210 507 6.54E-11 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 PA257_5308 967aca3d48e21703f991f1645a7dd62c 139 Gene3D G3DSA:3.30.420.270 66 133 1.8E-12 T 12-10-2018 PA257_5308 967aca3d48e21703f991f1645a7dd62c 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 17 136 1.1E-28 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 SMART SM00341 212 292 1.1E-11 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 Gene3D G3DSA:3.30.420.10 5 193 7.7E-61 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 Gene3D G3DSA:1.10.150.80 197 296 8.6E-26 T 12-10-2018 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 Hamap MF_01899 Ribonuclease D [rnd]. 6 372 43.397 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 Pfam PF00570 HRDC domain 215 282 3.3E-17 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 SUPERFAMILY SSF53098 5 212 1.6E-60 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 SMART SM00474 6 174 1.8E-35 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 SUPERFAMILY SSF47819 197 303 2.62E-29 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 Gene3D G3DSA:1.10.150.80 304 374 2.2E-5 T 12-10-2018 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 TIGRFAM TIGR01388 rnd: ribonuclease D 8 373 4.2E-157 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 Pfam PF01612 3'-5' exonuclease 6 173 2.0E-38 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PA257_4503 d1e60a7e88e66298aaf6f86d22f79eea 374 SUPERFAMILY SSF47819 297 372 9.91E-16 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 PA257_0234 ba83792f49060b332f7b5ea670f415be 293 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 293 149.676 T 12-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PA257_0234 ba83792f49060b332f7b5ea670f415be 293 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 18 282 1.2E-98 T 12-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PA257_0234 ba83792f49060b332f7b5ea670f415be 293 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 20 280 1.8E-71 T 12-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PA257_2056 786c328242cb4e67af5967e4116c488f 551 Gene3D G3DSA:1.20.1730.10 51 548 6.2E-62 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily PA257_2056 786c328242cb4e67af5967e4116c488f 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 469 1.3E-61 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 PA257_2056 786c328242cb4e67af5967e4116c488f 551 Pfam PF00474 Sodium:solute symporter family 64 470 8.0E-129 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 PA257_2056 786c328242cb4e67af5967e4116c488f 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site PA257_2056 786c328242cb4e67af5967e4116c488f 551 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 452 472 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 SUPERFAMILY SSF51905 1 333 3.24E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 451 1.4E-16 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 SUPERFAMILY SSF55424 344 455 3.09E-24 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 Gene3D G3DSA:3.50.50.60 146 266 5.5E-94 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 2.4E-28 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 2.4E-28 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 2.4E-28 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.4E-28 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 2.4E-28 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 Gene3D G3DSA:3.50.50.60 3 322 5.5E-94 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 311 6.2E-54 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PIRSF PIRSF000350 1 453 1.4E-85 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 Gene3D G3DSA:3.30.390.30 344 460 5.0E-24 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 8.5E-50 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 8.5E-50 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 8.5E-50 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 8.5E-50 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 8.5E-50 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 8.5E-50 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 8.5E-50 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 8.5E-50 T 12-10-2018 PA257_2527 5da9c2e9ff7e78782c8d380cde3478c5 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 8.5E-50 T 12-10-2018 PA257_0253 d35aff16f2c5c501e61c837a28b758e6 283 Pfam PF01144 Coenzyme A transferase 6 216 1.9E-24 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PA257_0253 d35aff16f2c5c501e61c837a28b758e6 283 SMART SM00882 4 224 9.1E-47 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PA257_0253 d35aff16f2c5c501e61c837a28b758e6 283 Gene3D G3DSA:3.40.1080.10 4 280 8.2E-72 T 12-10-2018 PA257_0253 d35aff16f2c5c501e61c837a28b758e6 283 Gene3D G3DSA:3.30.30.40 118 154 8.2E-72 T 12-10-2018 PA257_0253 d35aff16f2c5c501e61c837a28b758e6 283 SUPERFAMILY SSF100950 4 277 8.37E-79 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 Gene3D G3DSA:3.30.450.40 5 176 1.0E-18 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 Gene3D G3DSA:1.10.8.60 365 429 2.1E-18 T 12-10-2018 PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 Gene3D G3DSA:3.40.50.300 181 364 2.0E-65 T 12-10-2018 PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 Gene3D G3DSA:1.10.10.60 465 517 7.8E-9 T 12-10-2018 PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 SUPERFAMILY SSF55781 24 172 1.22E-16 T 12-10-2018 PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 Pfam PF00158 Sigma-54 interaction domain 194 360 4.6E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 SMART SM00382 214 357 1.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 Pfam PF01590 GAF domain 25 159 2.5E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 SUPERFAMILY SSF46689 465 516 3.76E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 SMART SM00065 22 170 1.5E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 SUPERFAMILY SSF52540 193 429 1.25E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2887 2439ac8bb019c5ee16753eba56a11d06 517 Pfam PF02954 Bacterial regulatory protein, Fis family 479 509 4.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_0213 9b6f1f3c37c9949d0aebfd7dd3186e7e 355 Gene3D G3DSA:3.40.190.10 126 227 1.3E-109 T 12-10-2018 PA257_0213 9b6f1f3c37c9949d0aebfd7dd3186e7e 355 Pfam PF09084 NMT1/THI5 like 68 260 2.4E-19 T 12-10-2018 IPR015168 SsuA/THI5-like PA257_0213 9b6f1f3c37c9949d0aebfd7dd3186e7e 355 SUPERFAMILY SSF53850 32 274 2.34E-39 T 12-10-2018 PA257_0213 9b6f1f3c37c9949d0aebfd7dd3186e7e 355 Gene3D G3DSA:3.40.190.10 36 339 1.3E-109 T 12-10-2018 PA257_1827 a2b02d50f91fe5f5cec7b85453c8d0c0 382 Pfam PF00296 Luciferase-like monooxygenase 4 325 6.7E-85 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_1827 a2b02d50f91fe5f5cec7b85453c8d0c0 382 Gene3D G3DSA:3.20.20.30 1 361 1.4E-152 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_1827 a2b02d50f91fe5f5cec7b85453c8d0c0 382 SUPERFAMILY SSF51679 3 349 1.11E-96 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_1827 a2b02d50f91fe5f5cec7b85453c8d0c0 382 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 3 379 80.174 T 12-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 PA257_1827 a2b02d50f91fe5f5cec7b85453c8d0c0 382 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 1.3E-191 T 12-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 PA257_6267 c273b93d8325b60d510853a70fd66c4a 470 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PA257_6267 c273b93d8325b60d510853a70fd66c4a 470 PIRSF PIRSF006060 1 466 5.6E-71 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_6267 c273b93d8325b60d510853a70fd66c4a 470 Gene3D G3DSA:1.20.1740.10 10 461 1.5E-62 T 12-10-2018 PA257_6267 c273b93d8325b60d510853a70fd66c4a 470 Pfam PF00324 Amino acid permease 18 452 3.0E-115 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_1919 455875486bc0150a2641eaf7045d1bd4 434 Gene3D G3DSA:1.20.1250.20 202 377 1.4E-22 T 12-10-2018 PA257_1919 455875486bc0150a2641eaf7045d1bd4 434 Pfam PF07690 Major Facilitator Superfamily 206 377 8.6E-17 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1919 455875486bc0150a2641eaf7045d1bd4 434 Gene3D G3DSA:1.20.1250.20 4 198 1.3E-12 T 12-10-2018 PA257_1919 455875486bc0150a2641eaf7045d1bd4 434 SUPERFAMILY SSF103473 8 374 3.4E-43 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0683 d486da688892f67fbae13c101a785bc8 128 Pfam PF01124 MAPEG family 3 127 7.0E-22 T 12-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PA257_0683 d486da688892f67fbae13c101a785bc8 128 SUPERFAMILY SSF161084 2 125 9.03E-23 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily PA257_0683 d486da688892f67fbae13c101a785bc8 128 Gene3D G3DSA:1.20.120.550 1 128 1.6E-17 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily PA257_6380 b99948258683aea6771cef393609a886 745 SMART SM00155 300 331 7.0 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_6380 b99948258683aea6771cef393609a886 745 SMART SM00155 637 664 0.009 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_6380 b99948258683aea6771cef393609a886 745 SUPERFAMILY SSF56024 22 394 3.34E-27 T 12-10-2018 PA257_6380 b99948258683aea6771cef393609a886 745 SUPERFAMILY SSF56024 372 692 5.16E-16 T 12-10-2018 PA257_6380 b99948258683aea6771cef393609a886 745 Gene3D G3DSA:3.30.870.10 37 154 3.3E-7 T 12-10-2018 PA257_6380 b99948258683aea6771cef393609a886 745 Gene3D G3DSA:3.30.870.10 229 399 1.7E-12 T 12-10-2018 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 SUPERFAMILY SSF55307 204 319 3.89E-42 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 Pfam PF12327 FtsZ family, C-terminal domain 222 316 7.1E-36 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 PRINTS PR00423 Cell division protein FtsZ signature 98 118 3.9E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 PRINTS PR00423 Cell division protein FtsZ signature 189 211 3.9E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 PRINTS PR00423 Cell division protein FtsZ signature 212 233 3.9E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 PRINTS PR00423 Cell division protein FtsZ signature 126 147 3.9E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 4.1E-40 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 328 2.4E-127 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 SMART SM00864 13 205 1.9E-113 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 SMART SM00865 207 325 3.0E-57 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 366 37.72 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 Gene3D G3DSA:3.40.50.1440 10 317 2.8E-117 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 PA257_5474 3977c0a004fafa5bd9467dedc2d4d6d6 394 SUPERFAMILY SSF52490 13 208 5.89E-69 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 PA257_6330 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 28 41 3.2E-24 T 12-10-2018 PA257_6330 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 95 112 3.2E-24 T 12-10-2018 PA257_6330 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 56 64 3.2E-24 T 12-10-2018 PA257_6330 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 4 19 3.2E-24 T 12-10-2018 PA257_6330 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 74 83 3.2E-24 T 12-10-2018 PA257_6330 136bbde33741f015c5ac556f2224b4f1 172 Gene3D G3DSA:3.40.50.300 2 169 4.8E-55 T 12-10-2018 PA257_6330 136bbde33741f015c5ac556f2224b4f1 172 SUPERFAMILY SSF52540 3 166 4.21E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6330 136bbde33741f015c5ac556f2224b4f1 172 Pfam PF01202 Shikimate kinase 10 166 1.8E-55 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PA257_6330 136bbde33741f015c5ac556f2224b4f1 172 ProSitePatterns PS01128 Shikimate kinase signature. 57 82 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PA257_6330 136bbde33741f015c5ac556f2224b4f1 172 Hamap MF_00109 Shikimate kinase [aroK]. 1 167 29.419 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PA257_6181 2eb80002916ce1b8321cc8b9110cc13d 444 SUPERFAMILY SSF103473 4 435 1.44E-74 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6181 2eb80002916ce1b8321cc8b9110cc13d 444 ProSitePatterns PS00217 Sugar transport proteins signature 2. 117 142 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_6181 2eb80002916ce1b8321cc8b9110cc13d 444 Pfam PF07690 Major Facilitator Superfamily 33 315 1.7E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6181 2eb80002916ce1b8321cc8b9110cc13d 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 75 90 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_6181 2eb80002916ce1b8321cc8b9110cc13d 444 Gene3D G3DSA:1.20.1250.20 16 429 5.2E-63 T 12-10-2018 PA257_3308 b3796686441ea8107594b8596ff04f3b 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 8.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_3308 b3796686441ea8107594b8596ff04f3b 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 8.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_3308 b3796686441ea8107594b8596ff04f3b 301 Gene3D G3DSA:1.10.10.60 239 294 8.9E-18 T 12-10-2018 PA257_3308 b3796686441ea8107594b8596ff04f3b 301 Pfam PF12833 Helix-turn-helix domain 211 289 4.6E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3308 b3796686441ea8107594b8596ff04f3b 301 SUPERFAMILY SSF46689 241 289 3.37E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3308 b3796686441ea8107594b8596ff04f3b 301 SUPERFAMILY SSF46689 188 239 1.43E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3308 b3796686441ea8107594b8596ff04f3b 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_3308 b3796686441ea8107594b8596ff04f3b 301 Gene3D G3DSA:1.10.10.60 176 238 2.8E-16 T 12-10-2018 PA257_3308 b3796686441ea8107594b8596ff04f3b 301 SMART SM00342 205 288 1.3E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3845 2d83b32a0a9bdbd62b865e51258ec2ec 207 PIRSF PIRSF001111 2 207 1.4E-93 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_3845 2d83b32a0a9bdbd62b865e51258ec2ec 207 SUPERFAMILY SSF52499 3 207 9.03E-62 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_3845 2d83b32a0a9bdbd62b865e51258ec2ec 207 PRINTS PR01398 Isochorismatase signature 167 185 1.1E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_3845 2d83b32a0a9bdbd62b865e51258ec2ec 207 PRINTS PR01398 Isochorismatase signature 3 15 1.1E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_3845 2d83b32a0a9bdbd62b865e51258ec2ec 207 PRINTS PR01398 Isochorismatase signature 79 98 1.1E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_3845 2d83b32a0a9bdbd62b865e51258ec2ec 207 PRINTS PR01398 Isochorismatase signature 111 133 1.1E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_3845 2d83b32a0a9bdbd62b865e51258ec2ec 207 PRINTS PR01398 Isochorismatase signature 185 202 1.1E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_3845 2d83b32a0a9bdbd62b865e51258ec2ec 207 PRINTS PR01398 Isochorismatase signature 62 79 1.1E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_3845 2d83b32a0a9bdbd62b865e51258ec2ec 207 Pfam PF00857 Isochorismatase family 33 204 3.0E-35 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_3845 2d83b32a0a9bdbd62b865e51258ec2ec 207 Gene3D G3DSA:3.40.50.850 1 207 8.4E-88 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_5325 e799b0a98b8a4408d07ba97d50b2428c 149 Gene3D G3DSA:3.30.700.10 9 57 6.1E-5 T 12-10-2018 PA257_5325 e799b0a98b8a4408d07ba97d50b2428c 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 4 18 4.7E-6 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PA257_5325 e799b0a98b8a4408d07ba97d50b2428c 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 19 33 4.7E-6 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PA257_5325 e799b0a98b8a4408d07ba97d50b2428c 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 124 139 4.7E-6 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PA257_5325 e799b0a98b8a4408d07ba97d50b2428c 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 6.7E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5325 e799b0a98b8a4408d07ba97d50b2428c 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 2.5E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5325 e799b0a98b8a4408d07ba97d50b2428c 149 SUPERFAMILY SSF54523 9 81 8.63E-11 T 12-10-2018 PA257_5325 e799b0a98b8a4408d07ba97d50b2428c 149 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 4 148 4.1E-56 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PA257_5325 e799b0a98b8a4408d07ba97d50b2428c 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_1532 03050efe618347b950db3658e63217ab 156 SUPERFAMILY SSF46955 1 113 2.93E-37 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_1532 03050efe618347b950db3658e63217ab 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.0E-9 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_1532 03050efe618347b950db3658e63217ab 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.0E-9 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_1532 03050efe618347b950db3658e63217ab 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.0E-9 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_1532 03050efe618347b950db3658e63217ab 156 Gene3D G3DSA:1.10.1660.10 1 120 1.7E-36 T 12-10-2018 PA257_1532 03050efe618347b950db3658e63217ab 156 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 1.3E-56 T 12-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 PA257_1532 03050efe618347b950db3658e63217ab 156 SMART SM00422 1 70 4.2E-31 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_1532 03050efe618347b950db3658e63217ab 156 Pfam PF13411 MerR HTH family regulatory protein 1 68 5.6E-22 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0952 e7a7617665bbd96d2eebf210e34772a1 719 ProSitePatterns PS00211 ABC transporters family signature. 625 639 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0952 e7a7617665bbd96d2eebf210e34772a1 719 SUPERFAMILY SSF52540 483 709 3.27E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0952 e7a7617665bbd96d2eebf210e34772a1 719 SMART SM00382 513 697 1.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0952 e7a7617665bbd96d2eebf210e34772a1 719 Pfam PF00664 ABC transporter transmembrane region 175 436 1.7E-38 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PA257_0952 e7a7617665bbd96d2eebf210e34772a1 719 Pfam PF03412 Peptidase C39 family 15 143 4.3E-37 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PA257_0952 e7a7617665bbd96d2eebf210e34772a1 719 Gene3D G3DSA:3.90.70.10 7 151 1.3E-40 T 12-10-2018 PA257_0952 e7a7617665bbd96d2eebf210e34772a1 719 Gene3D G3DSA:1.20.1560.10 156 470 4.3E-63 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_0952 e7a7617665bbd96d2eebf210e34772a1 719 Pfam PF00005 ABC transporter 504 653 1.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0952 e7a7617665bbd96d2eebf210e34772a1 719 Gene3D G3DSA:3.40.50.300 478 719 2.9E-73 T 12-10-2018 PA257_0952 e7a7617665bbd96d2eebf210e34772a1 719 SUPERFAMILY SSF90123 163 469 1.11E-56 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_4126 f59f76de7127d694313029088580d81a 388 Gene3D G3DSA:3.40.640.10 54 272 2.8E-114 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_4126 f59f76de7127d694313029088580d81a 388 Pfam PF00155 Aminotransferase class I and II 51 375 2.8E-29 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_4126 f59f76de7127d694313029088580d81a 388 SUPERFAMILY SSF53383 2 381 3.8E-93 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_4126 f59f76de7127d694313029088580d81a 388 Gene3D G3DSA:3.90.1150.10 15 378 2.8E-114 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_1056 f927d232c092bf854914a501e8abfdc0 521 SUPERFAMILY SSF47203 273 495 4.6E-45 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_1056 f927d232c092bf854914a501e8abfdc0 521 PIRSF PIRSF000331 12 502 1.9E-192 T 12-10-2018 IPR004925 HpaB/PvcC/4-BUDH PA257_1056 f927d232c092bf854914a501e8abfdc0 521 PIRSF PIRSF500125 1 519 9.2E-284 T 12-10-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein PA257_1056 f927d232c092bf854914a501e8abfdc0 521 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 16 282 4.7E-93 T 12-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal PA257_1056 f927d232c092bf854914a501e8abfdc0 521 SUPERFAMILY SSF56645 14 283 1.05E-81 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_1056 f927d232c092bf854914a501e8abfdc0 521 Gene3D G3DSA:1.10.3140.10 15 152 3.7E-44 T 12-10-2018 PA257_1056 f927d232c092bf854914a501e8abfdc0 521 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 3 521 0.0 T 12-10-2018 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 PA257_1056 f927d232c092bf854914a501e8abfdc0 521 Gene3D G3DSA:1.20.140.10 289 478 4.2E-63 T 12-10-2018 PA257_1056 f927d232c092bf854914a501e8abfdc0 521 Gene3D G3DSA:2.40.110.10 153 283 3.1E-39 T 12-10-2018 PA257_1056 f927d232c092bf854914a501e8abfdc0 521 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 289 484 1.4E-62 T 12-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal PA257_0752 5e46a81fd242851d4484fe5d8b48d412 369 SMART SM00382 36 219 3.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0752 5e46a81fd242851d4484fe5d8b48d412 369 SUPERFAMILY SSF52540 10 249 2.18E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0752 5e46a81fd242851d4484fe5d8b48d412 369 Pfam PF08402 TOBE domain 286 363 4.2E-17 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PA257_0752 5e46a81fd242851d4484fe5d8b48d412 369 SUPERFAMILY SSF50331 244 363 3.63E-18 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_0752 5e46a81fd242851d4484fe5d8b48d412 369 Gene3D G3DSA:2.40.50.100 289 326 1.6E-6 T 12-10-2018 PA257_0752 5e46a81fd242851d4484fe5d8b48d412 369 Gene3D G3DSA:3.40.50.300 6 246 1.4E-78 T 12-10-2018 PA257_0752 5e46a81fd242851d4484fe5d8b48d412 369 Gene3D G3DSA:2.40.50.140 247 288 1.6E-6 T 12-10-2018 PA257_0752 5e46a81fd242851d4484fe5d8b48d412 369 Pfam PF00005 ABC transporter 28 169 7.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0752 5e46a81fd242851d4484fe5d8b48d412 369 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0752 5e46a81fd242851d4484fe5d8b48d412 369 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 361 2.9E-115 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PA257_6856 ca422c2b78e3ac6f80c4060e395a9f0d 433 Pfam PF13692 Glycosyl transferases group 1 224 346 4.4E-6 T 12-10-2018 PA257_6856 ca422c2b78e3ac6f80c4060e395a9f0d 433 SUPERFAMILY SSF53756 82 420 3.09E-19 T 12-10-2018 PA257_6856 ca422c2b78e3ac6f80c4060e395a9f0d 433 Gene3D G3DSA:3.40.50.2000 200 420 6.2E-24 T 12-10-2018 PA257_6360 220f9db024411c491c35c7a95727a011 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 5.8E-22 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PA257_6360 220f9db024411c491c35c7a95727a011 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 22.946 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PA257_6360 220f9db024411c491c35c7a95727a011 82 Pfam PF02416 mttA/Hcf106 family 6 52 2.9E-14 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PA257_4541 bf9194849d7295a12e7aa94e28163382 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 211 1.4E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_4541 bf9194849d7295a12e7aa94e28163382 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 112 8.6E-27 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_4541 bf9194849d7295a12e7aa94e28163382 221 SUPERFAMILY SSF161098 17 204 1.57E-37 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4541 bf9194849d7295a12e7aa94e28163382 221 Gene3D G3DSA:1.10.3720.10 4 219 2.2E-46 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5298 18591bd2afcd84ea0db2fa5387c0bd37 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_5298 18591bd2afcd84ea0db2fa5387c0bd37 438 Pfam PF07690 Major Facilitator Superfamily 23 376 1.0E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_5298 18591bd2afcd84ea0db2fa5387c0bd37 438 SUPERFAMILY SSF103473 16 424 4.71E-59 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_5298 18591bd2afcd84ea0db2fa5387c0bd37 438 Gene3D G3DSA:1.20.1250.20 16 424 1.3E-55 T 12-10-2018 PA257_5298 18591bd2afcd84ea0db2fa5387c0bd37 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_5841 f69546d1b13e7c8f020b92a2e4098c5c 340 Pfam PF00762 Ferrochelatase 4 332 3.0E-99 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PA257_5841 f69546d1b13e7c8f020b92a2e4098c5c 340 Gene3D G3DSA:3.40.50.1400 5 332 7.7E-76 T 12-10-2018 PA257_5841 f69546d1b13e7c8f020b92a2e4098c5c 340 SUPERFAMILY SSF53800 3 335 8.94E-88 T 12-10-2018 PA257_5841 f69546d1b13e7c8f020b92a2e4098c5c 340 TIGRFAM TIGR00109 hemH: ferrochelatase 3 197 9.1E-39 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PA257_5841 f69546d1b13e7c8f020b92a2e4098c5c 340 Hamap MF_00323 Ferrochelatase [hemH]. 2 337 35.708 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PA257_5841 f69546d1b13e7c8f020b92a2e4098c5c 340 Gene3D G3DSA:3.40.50.1400 160 318 7.7E-76 T 12-10-2018 PA257_5028 7a2cf187f6dbeae7116d44940d031b19 192 Pfam PF06805 Bacteriophage lambda tail assembly protein I 1 86 3.8E-7 T 12-10-2018 IPR010654 Bacteriophage lambda tail assembly I PA257_5958 916bf1fdf1f0eb815e396ff44440f669 129 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 112 26.804 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PA257_5958 916bf1fdf1f0eb815e396ff44440f669 129 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 PA257_5958 916bf1fdf1f0eb815e396ff44440f669 129 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 3.6E-34 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PA257_5958 916bf1fdf1f0eb815e396ff44440f669 129 Gene3D G3DSA:3.30.300.20 1 107 1.8E-38 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_5958 916bf1fdf1f0eb815e396ff44440f669 129 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 99 1.0E-47 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PA257_5958 916bf1fdf1f0eb815e396ff44440f669 129 SUPERFAMILY SSF89919 2 106 1.83E-35 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily PA257_5958 916bf1fdf1f0eb815e396ff44440f669 129 Pfam PF02033 Ribosome-binding factor A 7 112 2.1E-32 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PA257_4959 89f08e4a87fc26e87cb4e2d42cb9c0b3 427 PIRSF PIRSF006066 1 427 1.5E-155 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PA257_4959 89f08e4a87fc26e87cb4e2d42cb9c0b3 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 2.1E-123 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PA257_4959 89f08e4a87fc26e87cb4e2d42cb9c0b3 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 4.7E-148 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PA257_6156 c03b58cfba07ef486f9beed267f57291 270 SMART SM00871 120 270 1.4E-33 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding PA257_6156 c03b58cfba07ef486f9beed267f57291 270 Gene3D G3DSA:1.10.1660.10 1 124 3.5E-28 T 12-10-2018 PA257_6156 c03b58cfba07ef486f9beed267f57291 270 SUPERFAMILY SSF55136 120 269 1.05E-32 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily PA257_6156 c03b58cfba07ef486f9beed267f57291 270 SMART SM00422 2 72 4.8E-20 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_6156 c03b58cfba07ef486f9beed267f57291 270 Pfam PF14526 Integron-associated effector binding protein 123 269 1.4E-37 T 12-10-2018 IPR029441 Integron-associated effector binding protein PA257_6156 c03b58cfba07ef486f9beed267f57291 270 Pfam PF13411 MerR HTH family regulatory protein 3 68 9.3E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_6156 c03b58cfba07ef486f9beed267f57291 270 SUPERFAMILY SSF46955 2 108 1.31E-25 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_6156 c03b58cfba07ef486f9beed267f57291 270 Gene3D G3DSA:3.20.80.10 125 270 2.6E-37 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily PA257_0624 0e39063a72699d9a48911c6479fa7b27 171 SUPERFAMILY SSF55021 1 67 4.2E-14 T 12-10-2018 PA257_0624 0e39063a72699d9a48911c6479fa7b27 171 Gene3D G3DSA:3.30.70.260 84 169 3.4E-22 T 12-10-2018 PA257_0624 0e39063a72699d9a48911c6479fa7b27 171 Gene3D G3DSA:3.30.70.260 1 77 2.4E-19 T 12-10-2018 PA257_0624 0e39063a72699d9a48911c6479fa7b27 171 SUPERFAMILY SSF55021 88 168 2.29E-15 T 12-10-2018 PA257_0624 0e39063a72699d9a48911c6479fa7b27 171 Pfam PF13740 ACT domain 3 65 1.0E-11 T 12-10-2018 PA257_0624 0e39063a72699d9a48911c6479fa7b27 171 PIRSF PIRSF028103 1 171 1.1E-54 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 591 41.565 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 Pfam PF01131 DNA topoisomerase 90 499 9.7E-93 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 Gene3D G3DSA:2.70.20.10 142 409 8.2E-106 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 Pfam PF01751 Toprim domain 9 71 2.7E-14 T 12-10-2018 IPR006171 TOPRIM domain PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 Gene3D G3DSA:1.10.460.10 94 504 8.2E-106 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 245 254 2.0E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 426 440 2.0E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 37 50 2.0E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 120 138 2.0E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 316 332 2.0E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 240 254 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 Gene3D G3DSA:3.40.50.140 1 92 2.1E-26 T 12-10-2018 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 SMART SM00436 62 150 5.4E-19 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 Gene3D G3DSA:1.10.290.10 211 330 8.2E-106 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 SUPERFAMILY SSF56712 8 550 8.76E-128 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain PA257_5642 e67cdb7539c3a0799a231a9cfa2bfcfd 591 SMART SM00437 203 463 7.3E-70 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PA257_6742 8a309ee6424a6f8bd34de1017ed4c924 359 Gene3D G3DSA:1.10.45.10 327 355 1.1E-5 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PA257_6742 8a309ee6424a6f8bd34de1017ed4c924 359 SUPERFAMILY SSF56176 19 181 1.64E-27 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_6742 8a309ee6424a6f8bd34de1017ed4c924 359 Pfam PF01565 FAD binding domain 14 143 6.3E-19 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PA257_6742 8a309ee6424a6f8bd34de1017ed4c924 359 Gene3D G3DSA:3.30.465.10 62 180 2.7E-31 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_6742 8a309ee6424a6f8bd34de1017ed4c924 359 SUPERFAMILY SSF55103 140 355 1.2E-19 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PA257_4169 e9814c98b54c7abfee60b96dba21ac6f 702 SUPERFAMILY SSF56935 37 664 8.85E-81 T 12-10-2018 PA257_4169 e9814c98b54c7abfee60b96dba21ac6f 702 Pfam PF00593 TonB dependent receptor 243 660 1.7E-25 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_4169 e9814c98b54c7abfee60b96dba21ac6f 702 Gene3D G3DSA:2.170.130.10 31 166 2.1E-27 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_4169 e9814c98b54c7abfee60b96dba21ac6f 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 156 5.7E-20 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_4858 cd84d2ed3486204a9e735d9f2d8f5d73 608 Gene3D G3DSA:2.40.10.200 493 594 5.2E-21 T 12-10-2018 PA257_4858 cd84d2ed3486204a9e735d9f2d8f5d73 608 Gene3D G3DSA:1.10.3210.40 1 216 2.7E-36 T 12-10-2018 PA257_4858 cd84d2ed3486204a9e735d9f2d8f5d73 608 Pfam PF07514 Putative helicase 2 307 6.0E-120 T 12-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative PA257_4858 cd84d2ed3486204a9e735d9f2d8f5d73 608 SUPERFAMILY SSF46785 473 599 1.14E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4858 cd84d2ed3486204a9e735d9f2d8f5d73 608 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 2 209 1.4E-87 T 12-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class PA257_4858 cd84d2ed3486204a9e735d9f2d8f5d73 608 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 476 598 5.7E-39 T 12-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal PA257_4858 cd84d2ed3486204a9e735d9f2d8f5d73 608 Gene3D G3DSA:1.10.10.10 477 547 5.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4354 5488e12f1dd778535d8ab646900c4647 135 PIRSF PIRSF016789 14 134 5.0E-37 T 12-10-2018 IPR007401 Protein of unknown function DUF454 PA257_4354 5488e12f1dd778535d8ab646900c4647 135 Pfam PF04304 Protein of unknown function (DUF454) 15 129 5.7E-41 T 12-10-2018 IPR007401 Protein of unknown function DUF454 PA257_4101 34e6fa3509af1020796fbc27caf66f39 181 Gene3D G3DSA:3.30.1130.10 51 181 6.9E-62 T 12-10-2018 PA257_4101 34e6fa3509af1020796fbc27caf66f39 181 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 108 118 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PA257_4101 34e6fa3509af1020796fbc27caf66f39 181 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 37.02 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PA257_4101 34e6fa3509af1020796fbc27caf66f39 181 SUPERFAMILY SSF55620 3 181 4.74E-79 T 12-10-2018 PA257_4101 34e6fa3509af1020796fbc27caf66f39 181 Pfam PF01227 GTP cyclohydrolase I 4 180 1.7E-76 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PA257_4101 34e6fa3509af1020796fbc27caf66f39 181 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PA257_4101 34e6fa3509af1020796fbc27caf66f39 181 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 4 181 3.6E-78 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PA257_4101 34e6fa3509af1020796fbc27caf66f39 181 Gene3D G3DSA:1.10.286.10 1 50 7.5E-21 T 12-10-2018 PA257_2075 7ecdbcbdfb04b70d052c1fdbe28ac1ee 111 Pfam PF01588 Putative tRNA binding domain 14 108 2.2E-16 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PA257_2075 7ecdbcbdfb04b70d052c1fdbe28ac1ee 111 SUPERFAMILY SSF50249 4 110 5.14E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2075 7ecdbcbdfb04b70d052c1fdbe28ac1ee 111 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 110 3.0E-49 T 12-10-2018 IPR008231 Probable chaperone CsaA PA257_2075 7ecdbcbdfb04b70d052c1fdbe28ac1ee 111 Gene3D G3DSA:2.40.50.140 1 111 8.7E-32 T 12-10-2018 PA257_4467 0cbfed89337eda8b72f57b33b29cbd03 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.4E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4467 0cbfed89337eda8b72f57b33b29cbd03 302 SUPERFAMILY SSF53850 92 300 1.49E-37 T 12-10-2018 PA257_4467 0cbfed89337eda8b72f57b33b29cbd03 302 Gene3D G3DSA:3.40.190.10 167 270 2.3E-53 T 12-10-2018 PA257_4467 0cbfed89337eda8b72f57b33b29cbd03 302 SUPERFAMILY SSF46785 8 115 1.36E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4467 0cbfed89337eda8b72f57b33b29cbd03 302 Gene3D G3DSA:3.40.190.10 94 296 2.3E-53 T 12-10-2018 PA257_4467 0cbfed89337eda8b72f57b33b29cbd03 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4467 0cbfed89337eda8b72f57b33b29cbd03 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4467 0cbfed89337eda8b72f57b33b29cbd03 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4467 0cbfed89337eda8b72f57b33b29cbd03 302 Pfam PF03466 LysR substrate binding domain 91 298 3.8E-36 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4467 0cbfed89337eda8b72f57b33b29cbd03 302 Gene3D G3DSA:1.10.10.10 6 92 5.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2783 76cc8bf61db0dd3e702d9bbf096a0609 109 Pfam PF05957 Bacterial protein of unknown function (DUF883) 17 109 8.1E-29 T 12-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 PA257_4827 6073d5a58a9998f43c8fcfa33dc04a19 337 Gene3D G3DSA:3.40.47.10 1 175 1.0E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4827 6073d5a58a9998f43c8fcfa33dc04a19 337 Gene3D G3DSA:3.40.47.10 176 337 1.6E-48 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4827 6073d5a58a9998f43c8fcfa33dc04a19 337 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 244 328 9.6E-27 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_4827 6073d5a58a9998f43c8fcfa33dc04a19 337 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 188 4.6E-23 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_4827 6073d5a58a9998f43c8fcfa33dc04a19 337 SUPERFAMILY SSF53901 8 329 2.31E-56 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4952 e26a1ca480701655494f807bc7f98610 329 SUPERFAMILY SSF46689 263 314 1.16E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4952 e26a1ca480701655494f807bc7f98610 329 Gene3D G3DSA:1.10.10.60 207 315 3.1E-37 T 12-10-2018 PA257_4952 e26a1ca480701655494f807bc7f98610 329 Gene3D G3DSA:3.40.50.880 2 199 2.3E-32 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4952 e26a1ca480701655494f807bc7f98610 329 Pfam PF12833 Helix-turn-helix domain 233 311 7.1E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4952 e26a1ca480701655494f807bc7f98610 329 SMART SM00342 227 310 1.3E-33 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4952 e26a1ca480701655494f807bc7f98610 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 306 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_4952 e26a1ca480701655494f807bc7f98610 329 SUPERFAMILY SSF46689 210 261 1.43E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4952 e26a1ca480701655494f807bc7f98610 329 SUPERFAMILY SSF52317 5 192 3.41E-24 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4952 e26a1ca480701655494f807bc7f98610 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 310 4.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4952 e26a1ca480701655494f807bc7f98610 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 294 4.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:2.70.20.10 218 478 5.6E-162 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 SMART SM00437 277 532 5.6E-119 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF08272 Topoisomerase I zinc-ribbon-like 760 795 1.7E-11 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF08272 Topoisomerase I zinc-ribbon-like 826 865 6.7E-20 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 SMART SM00436 138 226 1.5E-50 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.30.65.10 747 809 4.7E-26 T 12-10-2018 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.30.65.10 583 639 6.9E-6 T 12-10-2018 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.30.65.10 700 746 6.3E-8 T 12-10-2018 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:1.10.290.10 285 409 5.6E-162 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF57783 811 867 1.07E-23 T 12-10-2018 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01131 DNA topoisomerase 162 569 2.3E-128 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.40.50.140 1 168 4.6E-67 T 12-10-2018 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 111 124 3.6E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 319 328 3.6E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 3.6E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 3.6E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 3.6E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF57783 702 745 4.76E-9 T 12-10-2018 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 SMART SM00493 3 137 7.2E-31 T 12-10-2018 IPR006171 TOPRIM domain PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:2.20.25.10 810 868 5.8E-29 T 12-10-2018 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 636 8.4E-250 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF56712 3 612 4.32E-202 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:1.10.460.10 170 576 5.6E-162 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 734 59.6 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 625 2.5E-4 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 747 1.3E-11 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 314 328 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01751 Toprim domain 5 147 2.3E-32 T 12-10-2018 IPR006171 TOPRIM domain PA257_2292 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF57783 746 806 1.7E-16 T 12-10-2018 PA257_4644 1349ecf99865b3258e7bf40c30ad31b8 869 SUPERFAMILY SSF53448 405 662 2.1E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4644 1349ecf99865b3258e7bf40c30ad31b8 869 Gene3D G3DSA:3.90.550.10 411 633 7.2E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4644 1349ecf99865b3258e7bf40c30ad31b8 869 Gene3D G3DSA:3.20.20.80 45 304 3.9E-15 T 12-10-2018 PA257_4644 1349ecf99865b3258e7bf40c30ad31b8 869 SUPERFAMILY SSF51445 39 302 1.31E-54 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_4644 1349ecf99865b3258e7bf40c30ad31b8 869 ProSitePatterns PS00587 Glycosyl hydrolases family 17 signature. 223 236 - T 12-10-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 PA257_4644 1349ecf99865b3258e7bf40c30ad31b8 869 Pfam PF13641 Glycosyltransferase like family 2 421 649 2.2E-31 T 12-10-2018 PA257_3949 11cece04ab44928e9779e761ac204c36 615 Gene3D G3DSA:3.10.105.10 313 571 8.4E-258 T 12-10-2018 PA257_3949 11cece04ab44928e9779e761ac204c36 615 SUPERFAMILY SSF53850 51 592 6.21E-128 T 12-10-2018 PA257_3949 11cece04ab44928e9779e761ac204c36 615 PIRSF PIRSF002741 17 596 3.3E-113 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PA257_3949 11cece04ab44928e9779e761ac204c36 615 Gene3D G3DSA:3.40.190.10 29 591 8.4E-258 T 12-10-2018 PA257_3949 11cece04ab44928e9779e761ac204c36 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 508 2.9E-79 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 Pfam PF01464 Transglycosylase SLT domain 112 211 4.1E-25 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 121 149 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 Gene3D G3DSA:1.10.530.10 99 246 1.1E-30 T 12-10-2018 PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 SMART SM00257 466 509 2.2E-8 T 12-10-2018 IPR018392 LysM domain PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 SMART SM00257 331 374 8.3E-14 T 12-10-2018 IPR018392 LysM domain PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 SMART SM00257 401 444 3.2E-15 T 12-10-2018 IPR018392 LysM domain PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 Pfam PF01476 LysM domain 332 374 9.0E-13 T 12-10-2018 IPR018392 LysM domain PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 Pfam PF01476 LysM domain 402 443 8.8E-14 T 12-10-2018 IPR018392 LysM domain PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 Pfam PF01476 LysM domain 467 507 1.2E-8 T 12-10-2018 IPR018392 LysM domain PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 SUPERFAMILY SSF54106 401 443 1.31E-11 T 12-10-2018 PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 SUPERFAMILY SSF54106 330 374 3.66E-11 T 12-10-2018 PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 Gene3D G3DSA:3.10.350.10 462 512 7.0E-13 T 12-10-2018 IPR036779 LysM domain superfamily PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 Gene3D G3DSA:3.10.350.10 328 378 1.2E-15 T 12-10-2018 IPR036779 LysM domain superfamily PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 Gene3D G3DSA:3.10.350.10 397 450 2.2E-16 T 12-10-2018 IPR036779 LysM domain superfamily PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 SUPERFAMILY SSF54106 465 509 1.7E-10 T 12-10-2018 PA257_3947 159482b947bf8387dff54e6016f8ec2b 515 SUPERFAMILY SSF53955 101 260 1.04E-41 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_1458 c4e7499265715d8020d3ba03788425a7 842 Gene3D G3DSA:3.20.20.60 509 839 8.1E-109 T 12-10-2018 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 Pfam PF00381 PTS HPr component phosphorylation site 178 254 1.7E-17 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_1458 c4e7499265715d8020d3ba03788425a7 842 Gene3D G3DSA:2.70.70.10 1 152 2.0E-43 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_1458 c4e7499265715d8020d3ba03788425a7 842 Gene3D G3DSA:3.50.30.10 285 508 5.8E-53 T 12-10-2018 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 70 82 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 SUPERFAMILY SSF51261 2 150 1.92E-47 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_1458 c4e7499265715d8020d3ba03788425a7 842 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 185 192 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PA257_1458 c4e7499265715d8020d3ba03788425a7 842 SUPERFAMILY SSF47831 313 420 2.88E-24 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 178 253 4.6E-17 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_1458 c4e7499265715d8020d3ba03788425a7 842 SUPERFAMILY SSF55594 178 255 1.26E-18 T 12-10-2018 IPR035895 HPr-like superfamily PA257_1458 c4e7499265715d8020d3ba03788425a7 842 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 211 226 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PA257_1458 c4e7499265715d8020d3ba03788425a7 842 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 8 130 3.8E-40 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 316 832 3.6E-129 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 9 128 6.3E-37 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 Gene3D G3DSA:3.30.1340.10 175 257 1.6E-18 T 12-10-2018 IPR035895 HPr-like superfamily PA257_1458 c4e7499265715d8020d3ba03788425a7 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 770 782 8.9E-20 T 12-10-2018 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 717 732 8.9E-20 T 12-10-2018 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 568 587 8.9E-20 T 12-10-2018 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 734 749 8.9E-20 T 12-10-2018 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 Pfam PF00391 PEP-utilising enzyme, mobile domain 427 500 8.4E-18 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 527 811 1.2E-94 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 SUPERFAMILY SSF52009 402 514 6.28E-26 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 Gene3D G3DSA:1.10.274.10 302 423 5.8E-53 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 SUPERFAMILY SSF51621 530 819 3.66E-96 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 PRINTS PR00107 Phosphocarrier protein signature 185 201 2.2E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_1458 c4e7499265715d8020d3ba03788425a7 842 PRINTS PR00107 Phosphocarrier protein signature 210 225 2.2E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_1458 c4e7499265715d8020d3ba03788425a7 842 PRINTS PR00107 Phosphocarrier protein signature 225 242 2.2E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_1458 c4e7499265715d8020d3ba03788425a7 842 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 717 735 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PA257_1458 c4e7499265715d8020d3ba03788425a7 842 Pfam PF05524 PEP-utilising enzyme, N-terminal 285 403 7.8E-21 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PA257_6441 62292cd9476aa696ff6dc86452f5f4b5 368 Gene3D G3DSA:3.30.9.10 86 323 1.6E-129 T 12-10-2018 PA257_6441 62292cd9476aa696ff6dc86452f5f4b5 368 SUPERFAMILY SSF51905 4 368 6.04E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6441 62292cd9476aa696ff6dc86452f5f4b5 368 Gene3D G3DSA:3.50.50.60 5 362 1.6E-129 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6441 62292cd9476aa696ff6dc86452f5f4b5 368 Pfam PF01266 FAD dependent oxidoreductase 5 366 1.8E-65 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_3676 6e9d7a24fc3553ab4fdf51b5573c0c52 985 Pfam PF07660 Secretin and TonB N terminus short domain 66 113 4.2E-8 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_3676 6e9d7a24fc3553ab4fdf51b5573c0c52 985 Gene3D G3DSA:2.170.130.10 131 272 3.9E-38 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_3676 6e9d7a24fc3553ab4fdf51b5573c0c52 985 Gene3D G3DSA:3.55.50.30 43 111 2.7E-18 T 12-10-2018 PA257_3676 6e9d7a24fc3553ab4fdf51b5573c0c52 985 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 268 9.3E-23 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_3676 6e9d7a24fc3553ab4fdf51b5573c0c52 985 Pfam PF00593 TonB dependent receptor 422 981 3.8E-40 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_3676 6e9d7a24fc3553ab4fdf51b5573c0c52 985 SUPERFAMILY SSF56935 137 983 9.89E-95 T 12-10-2018 PA257_3676 6e9d7a24fc3553ab4fdf51b5573c0c52 985 SMART SM00965 64 114 8.3E-12 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_6525 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 SUPERFAMILY SSF53901 344 546 2.99E-30 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_6525 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 182 371 9.1E-13 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal PA257_6525 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 382 496 1.1E-10 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal PA257_6525 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Gene3D G3DSA:3.40.47.10 144 598 4.2E-85 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_6525 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 SUPERFAMILY SSF53901 154 380 8.3E-30 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_6525 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 SMART SM00825 Beta-ketoacyl synthase 5 549 0.0015 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PA257_0066 cabf0e00fab0d23b4fa0025efdc2f729 221 Gene3D G3DSA:3.40.50.10610 26 190 2.9E-66 T 12-10-2018 PA257_0066 cabf0e00fab0d23b4fa0025efdc2f729 221 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 15 214 7.5E-95 T 12-10-2018 IPR008517 Protein of unknown function DUF799 PA257_1516 ad8c9ef567bd7e7928137d91bee72126 229 Gene3D G3DSA:2.40.50.180 101 216 2.1E-15 T 12-10-2018 PA257_1516 ad8c9ef567bd7e7928137d91bee72126 229 SUPERFAMILY SSF50341 80 224 1.16E-21 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_1516 ad8c9ef567bd7e7928137d91bee72126 229 Pfam PF01584 CheW-like domain 83 223 1.8E-21 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_1516 ad8c9ef567bd7e7928137d91bee72126 229 Gene3D G3DSA:2.30.30.40 84 215 2.1E-15 T 12-10-2018 PA257_1516 ad8c9ef567bd7e7928137d91bee72126 229 SMART SM00260 78 221 3.3E-5 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_0925 f9287aa6f0ac041db469474b87ce349f 802 Gene3D G3DSA:2.40.170.20 259 802 6.3E-167 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_0925 f9287aa6f0ac041db469474b87ce349f 802 Pfam PF07715 TonB-dependent Receptor Plug Domain 149 250 3.2E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_0925 f9287aa6f0ac041db469474b87ce349f 802 Gene3D G3DSA:2.170.130.10 126 258 4.5E-41 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_0925 f9287aa6f0ac041db469474b87ce349f 802 Pfam PF00593 TonB dependent receptor 341 801 9.6E-54 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_0925 f9287aa6f0ac041db469474b87ce349f 802 SUPERFAMILY SSF56935 141 801 2.75E-125 T 12-10-2018 PA257_0925 f9287aa6f0ac041db469474b87ce349f 802 Gene3D G3DSA:3.55.50.30 17 123 2.3E-19 T 12-10-2018 PA257_0925 f9287aa6f0ac041db469474b87ce349f 802 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 151 800 2.4E-108 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_0925 f9287aa6f0ac041db469474b87ce349f 802 SMART SM00965 47 97 2.8E-8 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_2777 f0ad629d934ab3a4c758d8acfb9e6c3a 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.4E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2777 f0ad629d934ab3a4c758d8acfb9e6c3a 295 SUPERFAMILY SSF46785 5 88 1.84E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2777 f0ad629d934ab3a4c758d8acfb9e6c3a 295 Gene3D G3DSA:1.10.10.10 1 86 3.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2777 f0ad629d934ab3a4c758d8acfb9e6c3a 295 SUPERFAMILY SSF53850 89 293 1.5E-26 T 12-10-2018 PA257_2777 f0ad629d934ab3a4c758d8acfb9e6c3a 295 Gene3D G3DSA:3.40.190.290 104 292 1.2E-23 T 12-10-2018 PA257_2777 f0ad629d934ab3a4c758d8acfb9e6c3a 295 Pfam PF03466 LysR substrate binding domain 88 292 5.7E-26 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6096 a6c87a04bd6f0f4431a8d5373ebc527c 555 Pfam PF01895 PhoU domain 338 419 5.5E-7 T 12-10-2018 IPR026022 PhoU domain PA257_6096 a6c87a04bd6f0f4431a8d5373ebc527c 555 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 6 305 1.9E-63 T 12-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 PA257_6096 a6c87a04bd6f0f4431a8d5373ebc527c 555 Gene3D G3DSA:1.20.58.220 331 421 7.9E-8 T 12-10-2018 IPR038078 PhoU-like domain superfamily PA257_6096 a6c87a04bd6f0f4431a8d5373ebc527c 555 Pfam PF02690 Na+/Pi-cotransporter 16 150 1.1E-33 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 PA257_6096 a6c87a04bd6f0f4431a8d5373ebc527c 555 Pfam PF02690 Na+/Pi-cotransporter 142 238 8.2E-11 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 PA257_6096 a6c87a04bd6f0f4431a8d5373ebc527c 555 SUPERFAMILY SSF109755 328 527 2.62E-25 T 12-10-2018 PA257_6096 a6c87a04bd6f0f4431a8d5373ebc527c 555 Gene3D G3DSA:1.20.58.220 442 531 5.7E-6 T 12-10-2018 IPR038078 PhoU-like domain superfamily PA257_4481 0d76f4527097a54f6f5bb51e313c81d3 204 SUPERFAMILY SSF48498 97 201 2.25E-8 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_4481 0d76f4527097a54f6f5bb51e313c81d3 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 68 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_4481 0d76f4527097a54f6f5bb51e313c81d3 204 Gene3D G3DSA:1.10.10.60 2 66 9.8E-18 T 12-10-2018 PA257_4481 0d76f4527097a54f6f5bb51e313c81d3 204 SUPERFAMILY SSF46689 11 89 2.19E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4481 0d76f4527097a54f6f5bb51e313c81d3 204 Gene3D G3DSA:1.10.357.10 67 201 1.6E-13 T 12-10-2018 PA257_4481 0d76f4527097a54f6f5bb51e313c81d3 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.2E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4481 0d76f4527097a54f6f5bb51e313c81d3 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 1.2E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4481 0d76f4527097a54f6f5bb51e313c81d3 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 9.1E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3182 610d1341910a7eec476a540ef580881d 307 Gene3D G3DSA:1.10.10.10 2 91 3.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3182 610d1341910a7eec476a540ef580881d 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.0E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3182 610d1341910a7eec476a540ef580881d 307 Gene3D G3DSA:3.40.190.290 92 297 6.2E-55 T 12-10-2018 PA257_3182 610d1341910a7eec476a540ef580881d 307 SUPERFAMILY SSF53850 89 301 3.98E-45 T 12-10-2018 PA257_3182 610d1341910a7eec476a540ef580881d 307 Pfam PF03466 LysR substrate binding domain 88 298 2.7E-46 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3182 610d1341910a7eec476a540ef580881d 307 SUPERFAMILY SSF46785 3 110 9.08E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6898 12c9376b1b93d3e23d70ffeaed890da0 714 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 23 658 2.0E-182 T 12-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_6898 12c9376b1b93d3e23d70ffeaed890da0 714 SUPERFAMILY SSF51998 15 690 1.34E-176 T 12-10-2018 PA257_6898 12c9376b1b93d3e23d70ffeaed890da0 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 443 2.2E-18 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_6898 12c9376b1b93d3e23d70ffeaed890da0 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 392 414 2.2E-18 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_6898 12c9376b1b93d3e23d70ffeaed890da0 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 177 196 2.2E-18 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_6898 12c9376b1b93d3e23d70ffeaed890da0 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 354 377 2.2E-18 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_6898 12c9376b1b93d3e23d70ffeaed890da0 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 508 535 2.2E-18 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_6898 12c9376b1b93d3e23d70ffeaed890da0 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 316 327 2.2E-18 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_6898 12c9376b1b93d3e23d70ffeaed890da0 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 102 650 3.9E-141 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_6898 12c9376b1b93d3e23d70ffeaed890da0 714 Gene3D G3DSA:3.20.70.20 9 664 2.2E-160 T 12-10-2018 PA257_4735 d026900aa74ccc7adce03234f052f66a 400 Gene3D G3DSA:2.10.70.40 276 328 2.6E-46 T 12-10-2018 PA257_4735 d026900aa74ccc7adce03234f052f66a 400 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 248 386 2.3E-22 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PA257_4735 d026900aa74ccc7adce03234f052f66a 400 SUPERFAMILY SSF53955 204 279 8.62E-5 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_4735 d026900aa74ccc7adce03234f052f66a 400 Pfam PF10135 Rod binding protein 56 107 1.6E-16 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal PA257_4735 d026900aa74ccc7adce03234f052f66a 400 SMART SM00047 229 389 2.9E-38 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PA257_4735 d026900aa74ccc7adce03234f052f66a 400 Gene3D G3DSA:1.10.530.10 242 381 2.6E-46 T 12-10-2018 PA257_4735 d026900aa74ccc7adce03234f052f66a 400 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 19 385 1.9E-84 T 12-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 PA257_3249 9693ee25d37ece9ea6348bba41b9a4ef 472 Gene3D G3DSA:1.20.1600.10 48 461 2.0E-121 T 12-10-2018 PA257_3249 9693ee25d37ece9ea6348bba41b9a4ef 472 Gene3D G3DSA:2.20.200.10 95 349 2.0E-121 T 12-10-2018 PA257_3249 9693ee25d37ece9ea6348bba41b9a4ef 472 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 460 8.4E-105 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_3249 9693ee25d37ece9ea6348bba41b9a4ef 472 SUPERFAMILY SSF56954 2 464 1.96E-105 T 12-10-2018 PA257_3249 9693ee25d37ece9ea6348bba41b9a4ef 472 Pfam PF02321 Outer membrane efflux protein 58 252 1.4E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_3249 9693ee25d37ece9ea6348bba41b9a4ef 472 Pfam PF02321 Outer membrane efflux protein 283 458 6.2E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_5926 d6d269188d7a0e90c54338b69f43a720 149 Pfam PF14248 Domain of unknown function (DUF4345) 4 120 1.7E-12 T 12-10-2018 IPR025597 Protein of unknown function DUF4345 PA257_3322 3a4d048732a42fbeb855563967272940 343 SUPERFAMILY SSF47413 15 73 5.06E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_3322 3a4d048732a42fbeb855563967272940 343 SUPERFAMILY SSF53822 72 327 1.16E-52 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_3322 3a4d048732a42fbeb855563967272940 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 2.3E-13 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PA257_3322 3a4d048732a42fbeb855563967272940 343 SMART SM00354 15 85 2.1E-21 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PA257_3322 3a4d048732a42fbeb855563967272940 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 18 36 - T 12-10-2018 PA257_3322 3a4d048732a42fbeb855563967272940 343 Gene3D G3DSA:3.40.50.2300 172 304 8.6E-66 T 12-10-2018 PA257_3322 3a4d048732a42fbeb855563967272940 343 Gene3D G3DSA:1.10.260.40 7 72 1.7E-19 T 12-10-2018 PA257_3322 3a4d048732a42fbeb855563967272940 343 Gene3D G3DSA:3.40.50.2300 78 324 8.6E-66 T 12-10-2018 PA257_3322 3a4d048732a42fbeb855563967272940 343 Pfam PF13377 Periplasmic binding protein-like domain 182 343 1.3E-29 T 12-10-2018 PA257_3900 9dbf07935c34b008b3670bb601eb3c75 385 SUPERFAMILY SSF54631 232 374 4.11E-34 T 12-10-2018 PA257_3900 9dbf07935c34b008b3670bb601eb3c75 385 SMART SM00116 251 299 2.0E-7 T 12-10-2018 IPR000644 CBS domain PA257_3900 9dbf07935c34b008b3670bb601eb3c75 385 SMART SM00116 323 371 2.0E-11 T 12-10-2018 IPR000644 CBS domain PA257_3900 9dbf07935c34b008b3670bb601eb3c75 385 Pfam PF04982 HPP family 58 176 3.0E-30 T 12-10-2018 IPR007065 HPP PA257_3900 9dbf07935c34b008b3670bb601eb3c75 385 Gene3D G3DSA:3.10.580.10 225 308 5.8E-17 T 12-10-2018 PA257_3900 9dbf07935c34b008b3670bb601eb3c75 385 Gene3D G3DSA:3.10.580.10 309 384 1.2E-15 T 12-10-2018 PA257_3900 9dbf07935c34b008b3670bb601eb3c75 385 Pfam PF00571 CBS domain 245 297 9.4E-11 T 12-10-2018 IPR000644 CBS domain PA257_3900 9dbf07935c34b008b3670bb601eb3c75 385 Pfam PF00571 CBS domain 318 370 2.0E-12 T 12-10-2018 IPR000644 CBS domain PA257_3714 f905dea881ee33c158ecdcd1b5d4da90 279 Gene3D G3DSA:3.90.550.10 1 274 1.5E-80 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_3714 f905dea881ee33c158ecdcd1b5d4da90 279 SUPERFAMILY SSF53448 2 270 5.18E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_3714 f905dea881ee33c158ecdcd1b5d4da90 279 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 264 1.9E-122 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 PA257_3714 f905dea881ee33c158ecdcd1b5d4da90 279 Pfam PF00483 Nucleotidyl transferase 9 267 4.1E-31 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PA257_0483 f84e737e87b2256a925624da9c3980d8 273 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 19 271 3.5E-98 T 12-10-2018 IPR011928 Bacteriophage phiJL001, Gp84 PA257_0483 f84e737e87b2256a925624da9c3980d8 273 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 14 159 5.3E-9 T 12-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal PA257_0483 f84e737e87b2256a925624da9c3980d8 273 Pfam PF09356 Phage conserved hypothetical protein BR0599 188 264 1.3E-15 T 12-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal PA257_3129 f84e737e87b2256a925624da9c3980d8 273 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 19 271 3.5E-98 T 12-10-2018 IPR011928 Bacteriophage phiJL001, Gp84 PA257_3129 f84e737e87b2256a925624da9c3980d8 273 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 14 159 5.3E-9 T 12-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal PA257_3129 f84e737e87b2256a925624da9c3980d8 273 Pfam PF09356 Phage conserved hypothetical protein BR0599 188 264 1.3E-15 T 12-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 SUPERFAMILY SSF53671 4 334 6.94E-100 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 333 3.6E-134 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 Gene3D G3DSA:3.40.50.1370 5 330 3.7E-139 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 Gene3D G3DSA:3.40.50.1370 151 320 3.7E-139 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 334 81.239 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.2E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.2E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 3.2E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 298 321 3.2E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.3E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.0E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.0E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.0E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.0E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 312 323 1.0E-30 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PA257_6523 eda62eebef81a4cefa04693adb67a9c9 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 331 4.2E-54 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PA257_2044 b439e58b3085f44731df075cc5596b79 84 Gene3D G3DSA:3.30.1070.10 21 80 5.4E-30 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 PA257_2044 b439e58b3085f44731df075cc5596b79 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 20.708 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 PA257_2044 b439e58b3085f44731df075cc5596b79 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 7.6E-38 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 PA257_2044 b439e58b3085f44731df075cc5596b79 84 SUPERFAMILY SSF55229 33 83 2.48E-17 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 PA257_2044 b439e58b3085f44731df075cc5596b79 84 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 6.5E-28 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 PA257_6064 24c2c5ed5a8a9de2a62210e1d6f86aa7 311 Gene3D G3DSA:3.20.20.190 26 304 1.2E-35 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PA257_6064 24c2c5ed5a8a9de2a62210e1d6f86aa7 311 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 151 5.5E-17 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PA257_6064 24c2c5ed5a8a9de2a62210e1d6f86aa7 311 SUPERFAMILY SSF51695 29 297 2.43E-45 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PA257_6700 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 Gene3D G3DSA:2.20.28.120 1 51 3.5E-28 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6700 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.99 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6700 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 SUPERFAMILY SSF57829 1 49 2.93E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 PA257_6700 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 51 2.4E-25 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6700 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6700 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 Pfam PF00471 Ribosomal protein L33 4 49 3.6E-17 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2767 c0060837d1537e54bec55cd833a15b27 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 7.5E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2767 c0060837d1537e54bec55cd833a15b27 193 Gene3D G3DSA:1.10.357.10 52 176 5.9E-22 T 12-10-2018 PA257_2767 c0060837d1537e54bec55cd833a15b27 193 Gene3D G3DSA:1.10.10.60 5 51 6.8E-13 T 12-10-2018 PA257_2767 c0060837d1537e54bec55cd833a15b27 193 SUPERFAMILY SSF46689 1 71 2.31E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2767 c0060837d1537e54bec55cd833a15b27 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.8E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2767 c0060837d1537e54bec55cd833a15b27 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.8E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2767 c0060837d1537e54bec55cd833a15b27 193 SUPERFAMILY SSF48498 76 174 2.36E-23 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_4729 889319987f432779c3d669714069f14b 255 SUPERFAMILY SSF51735 10 254 1.3E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4729 889319987f432779c3d669714069f14b 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 253 5.4E-55 T 12-10-2018 PA257_4729 889319987f432779c3d669714069f14b 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 192 0.0046 T 12-10-2018 PA257_4729 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 5.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4729 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 5.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4729 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 5.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4729 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 5.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4729 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4729 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 5.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4729 889319987f432779c3d669714069f14b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 3.0E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4729 889319987f432779c3d669714069f14b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.0E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4729 889319987f432779c3d669714069f14b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.0E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4729 889319987f432779c3d669714069f14b 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_4729 889319987f432779c3d669714069f14b 255 Gene3D G3DSA:3.40.50.720 1 255 9.9E-69 T 12-10-2018 PA257_0647 74546141705fb8233e0d22a5da20c464 598 Gene3D G3DSA:1.10.540.10 19 158 2.3E-16 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_0647 74546141705fb8233e0d22a5da20c464 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 591 5.5E-34 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PA257_0647 74546141705fb8233e0d22a5da20c464 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 29 1.3E-8 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PA257_0647 74546141705fb8233e0d22a5da20c464 598 SUPERFAMILY SSF47203 286 474 1.77E-52 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_0647 74546141705fb8233e0d22a5da20c464 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 1.5E-11 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_0647 74546141705fb8233e0d22a5da20c464 598 Gene3D G3DSA:2.40.110.10 160 286 1.5E-27 T 12-10-2018 PA257_0647 74546141705fb8233e0d22a5da20c464 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 7.5E-17 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_0647 74546141705fb8233e0d22a5da20c464 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 450 1.7E-25 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_0647 74546141705fb8233e0d22a5da20c464 598 SUPERFAMILY SSF56645 36 279 4.84E-58 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_0647 74546141705fb8233e0d22a5da20c464 598 Gene3D G3DSA:1.20.140.10 287 463 1.1E-48 T 12-10-2018 PA257_4373 4514f50459a2195c3b638372a7afdcee 319 ProSitePatterns PS01053 Arginase family signature. 241 262 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 PA257_4373 4514f50459a2195c3b638372a7afdcee 319 TIGRFAM TIGR01230 agmatinase: agmatinase 34 311 1.8E-63 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 PA257_4373 4514f50459a2195c3b638372a7afdcee 319 Gene3D G3DSA:3.40.800.10 1 319 1.3E-134 T 12-10-2018 PA257_4373 4514f50459a2195c3b638372a7afdcee 319 PIRSF PIRSF036979 15 316 1.1E-102 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 PA257_4373 4514f50459a2195c3b638372a7afdcee 319 Pfam PF00491 Arginase family 39 310 3.2E-89 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 PA257_4373 4514f50459a2195c3b638372a7afdcee 319 SUPERFAMILY SSF52768 4 313 1.98E-100 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily PA257_4373 4514f50459a2195c3b638372a7afdcee 319 PRINTS PR00116 Arginase signature 238 267 2.2E-13 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 PA257_4373 4514f50459a2195c3b638372a7afdcee 319 PRINTS PR00116 Arginase signature 125 140 2.2E-13 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 SMART SM00304 192 244 6.2E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 Gene3D G3DSA:1.20.1480.50 161 251 7.4E-11 T 12-10-2018 PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 SMART SM00387 517 611 1.8E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 Gene3D G3DSA:1.20.120.960 62 160 1.0E-7 T 12-10-2018 PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 PIRSF PIRSF003167 17 622 6.1E-198 T 12-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 Pfam PF07730 Histidine kinase 411 477 1.8E-17 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 518 607 5.5E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 62 85 8.9E-7 T 12-10-2018 IPR029095 NarX-like, N-terminal PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 SUPERFAMILY SSF158472 193 242 1.06E-9 T 12-10-2018 PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 SUPERFAMILY SSF55874 512 608 8.77E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 Gene3D G3DSA:3.30.565.10 477 610 1.2E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1287 3b78ded687cb2eaa05610b9710f2a65f 622 Pfam PF00672 HAMP domain 194 240 7.9E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4554 7f317d046abdff462a8e1139b0b8b87a 593 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 16 558 2.3E-253 T 12-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PA257_4554 7f317d046abdff462a8e1139b0b8b87a 593 Gene3D G3DSA:3.40.50.300 328 577 2.5E-67 T 12-10-2018 PA257_4554 7f317d046abdff462a8e1139b0b8b87a 593 SUPERFAMILY SSF52540 322 556 1.84E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4554 7f317d046abdff462a8e1139b0b8b87a 593 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4554 7f317d046abdff462a8e1139b0b8b87a 593 Gene3D G3DSA:1.20.1560.10 9 317 7.6E-37 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_4554 7f317d046abdff462a8e1139b0b8b87a 593 SUPERFAMILY SSF90123 20 320 1.14E-44 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_4554 7f317d046abdff462a8e1139b0b8b87a 593 SMART SM00382 358 544 2.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4554 7f317d046abdff462a8e1139b0b8b87a 593 Pfam PF00005 ABC transporter 349 496 1.8E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4554 7f317d046abdff462a8e1139b0b8b87a 593 Pfam PF00664 ABC transporter transmembrane region 34 282 2.0E-12 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PA257_4082 ae3647a919b3029d67555cf06ed5dcac 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 6.0E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PA257_4082 ae3647a919b3029d67555cf06ed5dcac 88 PIRSF PIRSF004669 1 88 1.1E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PA257_4082 ae3647a919b3029d67555cf06ed5dcac 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 1.1E-34 T 12-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 PA257_4082 ae3647a919b3029d67555cf06ed5dcac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.8E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PA257_4082 ae3647a919b3029d67555cf06ed5dcac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.8E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PA257_4082 ae3647a919b3029d67555cf06ed5dcac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.8E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PA257_4628 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 SMART SM00862 145 220 5.4E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_4628 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Gene3D G3DSA:3.40.50.2300 1 121 1.1E-37 T 12-10-2018 PA257_4628 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Pfam PF00072 Response regulator receiver domain 4 112 2.6E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4628 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 8.3E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_4628 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 SUPERFAMILY SSF52172 1 177 7.18E-40 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4628 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 SMART SM00448 1 112 2.2E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4628 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Gene3D G3DSA:1.10.10.10 122 224 4.6E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2396 4ebd1e66b7305eab8cec9c7404f5ab1c 343 SUPERFAMILY SSF81345 4 342 6.02E-77 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_2396 4ebd1e66b7305eab8cec9c7404f5ab1c 343 Pfam PF01032 FecCD transport family 21 341 1.7E-86 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PA257_2396 4ebd1e66b7305eab8cec9c7404f5ab1c 343 Gene3D G3DSA:1.10.3470.10 7 343 2.2E-93 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_3995 79dd81a39835e5e35882fb93423e1313 165 Pfam PF04545 Sigma-70, region 4 108 157 7.2E-12 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PA257_3995 79dd81a39835e5e35882fb93423e1313 165 Gene3D G3DSA:1.10.1740.10 2 103 5.2E-30 T 12-10-2018 PA257_3995 79dd81a39835e5e35882fb93423e1313 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 158 9.2E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_3995 79dd81a39835e5e35882fb93423e1313 165 SUPERFAMILY SSF88659 99 160 1.25E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_3995 79dd81a39835e5e35882fb93423e1313 165 Gene3D G3DSA:1.10.10.10 104 162 1.5E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3995 79dd81a39835e5e35882fb93423e1313 165 SUPERFAMILY SSF88946 3 91 1.88E-26 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3995 79dd81a39835e5e35882fb93423e1313 165 Pfam PF04542 Sigma-70 region 2 8 75 1.4E-19 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_2574 012da1ea722b5ad4e7d7391d085b014c 199 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 186 7.3E-7 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_2574 012da1ea722b5ad4e7d7391d085b014c 199 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 63 3.2E-10 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_2574 012da1ea722b5ad4e7d7391d085b014c 199 SUPERFAMILY SSF47616 73 194 5.29E-28 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_2574 012da1ea722b5ad4e7d7391d085b014c 199 SUPERFAMILY SSF52833 1 67 1.12E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2574 012da1ea722b5ad4e7d7391d085b014c 199 Gene3D G3DSA:1.20.1050.10 71 185 9.4E-85 T 12-10-2018 PA257_2574 012da1ea722b5ad4e7d7391d085b014c 199 Gene3D G3DSA:3.40.30.10 1 195 9.4E-85 T 12-10-2018 PA257_3601 c0e0030c8208826e14f3e4cfdeacca27 872 Pfam PF13953 PapC C-terminal domain 780 843 3.9E-21 T 12-10-2018 IPR025949 PapC-like, C-terminal domain PA257_3601 c0e0030c8208826e14f3e4cfdeacca27 872 Gene3D G3DSA:3.10.20.410 33 157 1.4E-24 T 12-10-2018 PA257_3601 c0e0030c8208826e14f3e4cfdeacca27 872 Pfam PF00577 Outer membrane usher protein 197 771 9.6E-143 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 PA257_3601 c0e0030c8208826e14f3e4cfdeacca27 872 Gene3D G3DSA:2.60.40.2070 778 870 1.2E-19 T 12-10-2018 PA257_3601 c0e0030c8208826e14f3e4cfdeacca27 872 Pfam PF13954 PapC N-terminal domain 35 179 3.4E-39 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 PA257_3601 c0e0030c8208826e14f3e4cfdeacca27 872 Gene3D G3DSA:2.60.40.3110 270 359 4.8E-31 T 12-10-2018 PA257_3601 c0e0030c8208826e14f3e4cfdeacca27 872 Gene3D G3DSA:2.60.40.2610 686 776 2.9E-28 T 12-10-2018 PA257_3601 c0e0030c8208826e14f3e4cfdeacca27 872 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 312 322 - T 12-10-2018 IPR018030 Fimbrial membrane usher, conserved site PA257_3601 c0e0030c8208826e14f3e4cfdeacca27 872 SUPERFAMILY SSF141729 34 157 1.05E-27 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 PA257_1835 97f461a23ed5b963da45a9bf19d9832e 234 SUPERFAMILY SSF51735 6 232 3.21E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1835 97f461a23ed5b963da45a9bf19d9832e 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1835 97f461a23ed5b963da45a9bf19d9832e 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1835 97f461a23ed5b963da45a9bf19d9832e 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1835 97f461a23ed5b963da45a9bf19d9832e 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_1835 97f461a23ed5b963da45a9bf19d9832e 234 Gene3D G3DSA:3.40.50.720 4 234 3.2E-52 T 12-10-2018 PA257_1835 97f461a23ed5b963da45a9bf19d9832e 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 232 5.3E-26 T 12-10-2018 PA257_0446 115225bfe9336b6e35b42c7da41127b9 198 PIRSF PIRSF004553 17 198 5.5E-48 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 PA257_0446 115225bfe9336b6e35b42c7da41127b9 198 Pfam PF03602 Conserved hypothetical protein 95 18 195 4.1E-59 T 12-10-2018 PA257_0446 115225bfe9336b6e35b42c7da41127b9 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 62 76 9.5E-6 T 12-10-2018 PA257_0446 115225bfe9336b6e35b42c7da41127b9 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 37 53 9.5E-6 T 12-10-2018 PA257_0446 115225bfe9336b6e35b42c7da41127b9 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 128 140 9.5E-6 T 12-10-2018 PA257_0446 115225bfe9336b6e35b42c7da41127b9 198 SUPERFAMILY SSF53335 18 195 1.67E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0446 115225bfe9336b6e35b42c7da41127b9 198 Gene3D G3DSA:3.40.50.150 9 197 4.4E-56 T 12-10-2018 PA257_0446 115225bfe9336b6e35b42c7da41127b9 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 196 1.1E-50 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 PA257_4643 b5cf80187a56d66ba0c110762ce074ce 270 Gene3D G3DSA:3.40.50.720 2 264 7.2E-103 T 12-10-2018 PA257_4643 b5cf80187a56d66ba0c110762ce074ce 270 SUPERFAMILY SSF69572 3 254 1.16E-65 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 PA257_4643 b5cf80187a56d66ba0c110762ce074ce 270 Pfam PF00899 ThiF family 15 262 1.1E-42 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PA257_3250 5977e0d6c82d0108a2e445cdcfee533b 663 SMART SM00382 40 227 5.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3250 5977e0d6c82d0108a2e445cdcfee533b 663 Pfam PF12704 MacB-like periplasmic core domain 291 507 4.1E-37 T 12-10-2018 IPR025857 MacB-like periplasmic core domain PA257_3250 5977e0d6c82d0108a2e445cdcfee533b 663 Pfam PF00005 ABC transporter 31 179 2.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3250 5977e0d6c82d0108a2e445cdcfee533b 663 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3250 5977e0d6c82d0108a2e445cdcfee533b 663 Gene3D G3DSA:3.40.50.300 8 277 8.4E-69 T 12-10-2018 PA257_3250 5977e0d6c82d0108a2e445cdcfee533b 663 SUPERFAMILY SSF52540 10 244 3.17E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3250 5977e0d6c82d0108a2e445cdcfee533b 663 Pfam PF02687 FtsX-like permease family 570 656 1.4E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PA257_5705 1e6f0bdf327b36ed7c8d85f0b3f85c20 143 Pfam PF07511 Protein of unknown function (DUF1525) 30 141 1.2E-38 T 12-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 PA257_5705 1e6f0bdf327b36ed7c8d85f0b3f85c20 143 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 29 139 1.6E-43 T 12-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 PA257_6960 54d82bce207089d40a4917f143e29be5 286 Gene3D G3DSA:1.10.287.80 6 282 2.0E-108 T 12-10-2018 PA257_6960 54d82bce207089d40a4917f143e29be5 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.1E-106 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6960 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 4.4E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6960 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 4.4E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6960 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.4E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6960 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.4E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6960 54d82bce207089d40a4917f143e29be5 286 SUPERFAMILY SSF52943 2 286 1.83E-95 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6960 54d82bce207089d40a4917f143e29be5 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.72 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6960 54d82bce207089d40a4917f143e29be5 286 Pfam PF00231 ATP synthase 5 285 3.4E-96 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6960 54d82bce207089d40a4917f143e29be5 286 Gene3D G3DSA:3.40.1380.10 61 205 2.0E-108 T 12-10-2018 PA257_6960 54d82bce207089d40a4917f143e29be5 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6820 1c71a762ed2728f66cb3c1db1b2ed866 360 SUPERFAMILY SSF51246 297 356 1.26E-13 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PA257_6820 1c71a762ed2728f66cb3c1db1b2ed866 360 Gene3D G3DSA:3.30.1490.20 102 171 3.7E-26 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_6820 1c71a762ed2728f66cb3c1db1b2ed866 360 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 348 1.1E-108 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PA257_6820 1c71a762ed2728f66cb3c1db1b2ed866 360 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 344 39.177 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PA257_6820 1c71a762ed2728f66cb3c1db1b2ed866 360 SUPERFAMILY SSF56059 97 292 2.47E-56 T 12-10-2018 PA257_6820 1c71a762ed2728f66cb3c1db1b2ed866 360 SUPERFAMILY SSF52440 2 94 2.45E-22 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_6820 1c71a762ed2728f66cb3c1db1b2ed866 360 Pfam PF02222 ATP-grasp domain 106 272 2.1E-57 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PA257_6820 1c71a762ed2728f66cb3c1db1b2ed866 360 Gene3D G3DSA:3.40.50.20 1 101 4.7E-33 T 12-10-2018 PA257_6820 1c71a762ed2728f66cb3c1db1b2ed866 360 Gene3D G3DSA:3.30.470.20 172 360 2.9E-62 T 12-10-2018 PA257_1789 d5a971f4eef2d5501b7f829e0fd984b9 295 SUPERFAMILY SSF53474 8 274 1.08E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1789 d5a971f4eef2d5501b7f829e0fd984b9 295 Gene3D G3DSA:3.40.50.1820 2 266 3.0E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1789 d5a971f4eef2d5501b7f829e0fd984b9 295 Pfam PF00561 alpha/beta hydrolase fold 30 252 6.4E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0196 672f18d69867a468f86340a833e7224e 275 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 97 259 4.9E-49 T 12-10-2018 IPR000160 GGDEF domain PA257_0196 672f18d69867a468f86340a833e7224e 275 SUPERFAMILY SSF55073 105 259 1.02E-45 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_0196 672f18d69867a468f86340a833e7224e 275 Gene3D G3DSA:3.30.70.270 95 261 6.4E-55 T 12-10-2018 PA257_0196 672f18d69867a468f86340a833e7224e 275 Pfam PF00990 Diguanylate cyclase, GGDEF domain 101 255 6.5E-45 T 12-10-2018 IPR000160 GGDEF domain PA257_0196 672f18d69867a468f86340a833e7224e 275 SMART SM00267 89 260 2.6E-56 T 12-10-2018 IPR000160 GGDEF domain PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 SUPERFAMILY SSF56784 13 226 4.33E-59 T 12-10-2018 IPR036412 HAD-like superfamily PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 194 1.0E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 199 3.0E-34 T 12-10-2018 PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 Gene3D G3DSA:3.40.50.1000 16 221 8.8E-63 T 12-10-2018 IPR023214 HAD superfamily PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 197 1.8E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 113 126 6.0E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 13 24 6.0E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 6.0E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 6.0E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 16 227 7.2E-68 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 13 230 37.401 T 12-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 PA257_0757 9f335dff8ffd2faf718240b7ca9b1919 272 Gene3D G3DSA:1.10.150.240 28 99 8.8E-63 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PA257_1481 7ef5027d1e9e1bad08f5f11c5f034a38 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 11 297 1.8E-119 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 PA257_1481 7ef5027d1e9e1bad08f5f11c5f034a38 298 Gene3D G3DSA:1.10.150.130 6 99 4.4E-24 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_1481 7ef5027d1e9e1bad08f5f11c5f034a38 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 298 57.571 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD PA257_1481 7ef5027d1e9e1bad08f5f11c5f034a38 298 Gene3D G3DSA:1.10.443.10 111 292 3.4E-71 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_1481 7ef5027d1e9e1bad08f5f11c5f034a38 298 SUPERFAMILY SSF56349 8 288 2.21E-59 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_1481 7ef5027d1e9e1bad08f5f11c5f034a38 298 Pfam PF00589 Phage integrase family 113 283 5.1E-52 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_1481 7ef5027d1e9e1bad08f5f11c5f034a38 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 90 3.9E-19 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PA257_1481 7ef5027d1e9e1bad08f5f11c5f034a38 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 298 65.88 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 PA257_2888 6630992faf4a5b4681184eb688ee3848 393 Gene3D G3DSA:2.40.30.10 152 253 5.0E-36 T 12-10-2018 PA257_2888 6630992faf4a5b4681184eb688ee3848 393 Gene3D G3DSA:3.40.50.80 254 391 6.6E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_2888 6630992faf4a5b4681184eb688ee3848 393 SUPERFAMILY SSF46458 1 142 5.65E-38 T 12-10-2018 IPR009050 Globin-like superfamily PA257_2888 6630992faf4a5b4681184eb688ee3848 393 Pfam PF00175 Oxidoreductase NAD-binding domain 264 367 1.0E-9 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_2888 6630992faf4a5b4681184eb688ee3848 393 Gene3D G3DSA:1.10.490.10 1 146 8.7E-52 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PA257_2888 6630992faf4a5b4681184eb688ee3848 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 353 361 6.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_2888 6630992faf4a5b4681184eb688ee3848 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 6.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_2888 6630992faf4a5b4681184eb688ee3848 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 186 198 6.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_2888 6630992faf4a5b4681184eb688ee3848 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 248 257 6.8E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_2888 6630992faf4a5b4681184eb688ee3848 393 SUPERFAMILY SSF52343 255 388 6.02E-33 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_2888 6630992faf4a5b4681184eb688ee3848 393 Pfam PF00042 Globin 6 103 9.0E-9 T 12-10-2018 IPR000971 Globin GO:0020037 PA257_2888 6630992faf4a5b4681184eb688ee3848 393 Hamap MF_01252 Flavohemoprotein [hmp]. 1 391 53.564 T 12-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 PA257_2888 6630992faf4a5b4681184eb688ee3848 393 SUPERFAMILY SSF63380 151 253 1.02E-30 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_2888 6630992faf4a5b4681184eb688ee3848 393 Pfam PF00970 Oxidoreductase FAD-binding domain 159 253 2.6E-12 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PA257_5573 9c6bb7c000a4db6260199b50bfcf4ce8 531 SUPERFAMILY SSF53850 25 528 9.62E-147 T 12-10-2018 PA257_5573 9c6bb7c000a4db6260199b50bfcf4ce8 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 448 2.2E-96 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain PA257_5573 9c6bb7c000a4db6260199b50bfcf4ce8 531 Gene3D G3DSA:3.90.76.10 47 205 6.9E-162 T 12-10-2018 PA257_5573 9c6bb7c000a4db6260199b50bfcf4ce8 531 Gene3D G3DSA:3.40.190.10 206 518 6.9E-162 T 12-10-2018 PA257_5573 9c6bb7c000a4db6260199b50bfcf4ce8 531 PIRSF PIRSF002741 16 530 4.1E-104 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PA257_5573 9c6bb7c000a4db6260199b50bfcf4ce8 531 Gene3D G3DSA:3.10.105.10 287 505 6.9E-162 T 12-10-2018 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 SUPERFAMILY SSF56014 120 285 5.37E-47 T 12-10-2018 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 SUPERFAMILY SSF55124 1 125 3.76E-30 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 Gene3D G3DSA:3.30.413.10 119 319 1.7E-80 T 12-10-2018 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 SUPERFAMILY SSF56014 409 548 5.5E-38 T 12-10-2018 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 329 398 4.6E-15 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 2.7E-17 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 412 547 2.5E-10 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 Gene3D G3DSA:3.30.413.10 408 552 1.4E-31 T 12-10-2018 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 SUPERFAMILY SSF55124 252 421 1.39E-24 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 5.7E-41 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3920 b66a0c656449d540f1701bcc178ac8f0 552 Gene3D G3DSA:3.90.480.10 53 389 1.7E-80 T 12-10-2018 PA257_0810 77b047bafd35120d2141575158e66327 312 Pfam PF08279 HTH domain 2 54 5.6E-9 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 PA257_0810 77b047bafd35120d2141575158e66327 312 SUPERFAMILY SSF55681 71 260 1.31E-59 T 12-10-2018 PA257_0810 77b047bafd35120d2141575158e66327 312 Gene3D G3DSA:3.30.930.10 65 261 9.0E-62 T 12-10-2018 PA257_0810 77b047bafd35120d2141575158e66327 312 Gene3D G3DSA:2.30.30.100 264 312 2.0E-10 T 12-10-2018 PA257_0810 77b047bafd35120d2141575158e66327 312 SUPERFAMILY SSF46785 3 55 4.62E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0810 77b047bafd35120d2141575158e66327 312 SUPERFAMILY SSF50037 263 309 3.8E-7 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal PA257_0810 77b047bafd35120d2141575158e66327 312 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 73 309 2.4E-56 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_0810 77b047bafd35120d2141575158e66327 312 Gene3D G3DSA:1.10.10.10 1 59 3.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0810 77b047bafd35120d2141575158e66327 312 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 1 309 32.869 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 PA257_0810 77b047bafd35120d2141575158e66327 312 Pfam PF03099 Biotin/lipoate A/B protein ligase family 89 201 4.0E-18 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PA257_1682 08ff0faab1b06f97c1e0fd174b12858a 575 Gene3D G3DSA:1.20.140.10 288 445 2.5E-37 T 12-10-2018 PA257_1682 08ff0faab1b06f97c1e0fd174b12858a 575 SUPERFAMILY SSF47203 285 445 4.99E-39 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_1682 08ff0faab1b06f97c1e0fd174b12858a 575 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 276 3.9E-16 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_1682 08ff0faab1b06f97c1e0fd174b12858a 575 Gene3D G3DSA:2.40.110.20 135 287 3.3E-45 T 12-10-2018 PA257_1682 08ff0faab1b06f97c1e0fd174b12858a 575 SUPERFAMILY SSF56645 101 296 1.44E-40 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_1682 08ff0faab1b06f97c1e0fd174b12858a 575 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 287 443 6.3E-35 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_1682 08ff0faab1b06f97c1e0fd174b12858a 575 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 402 421 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_2310 c5387342ad959108071e3ff5aa11af7f 342 Pfam PF02424 ApbE family 35 315 5.5E-81 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 PA257_2310 c5387342ad959108071e3ff5aa11af7f 342 SUPERFAMILY SSF143631 29 334 1.31E-95 T 12-10-2018 IPR003374 ApbE-like superfamily PA257_2310 c5387342ad959108071e3ff5aa11af7f 342 PIRSF PIRSF006268 9 334 4.2E-84 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 PA257_2310 c5387342ad959108071e3ff5aa11af7f 342 Gene3D G3DSA:3.10.520.20 20 341 1.4E-120 T 12-10-2018 PA257_4178 1632bad14a6c44e8b48b51379aa8054c 301 SUPERFAMILY SSF53850 52 266 7.28E-20 T 12-10-2018 PA257_4178 1632bad14a6c44e8b48b51379aa8054c 301 Gene3D G3DSA:3.40.190.10 227 262 4.7E-8 T 12-10-2018 PA257_4178 1632bad14a6c44e8b48b51379aa8054c 301 Gene3D G3DSA:3.40.190.10 140 226 4.7E-8 T 12-10-2018 PA257_4178 1632bad14a6c44e8b48b51379aa8054c 301 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 136 265 1.3E-7 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_4495 aa08c979a1cebe95a660d0431be78aab 851 Gene3D G3DSA:3.55.50.30 25 129 3.5E-25 T 12-10-2018 PA257_4495 aa08c979a1cebe95a660d0431be78aab 851 Gene3D G3DSA:2.40.170.20 247 851 9.0E-90 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_4495 aa08c979a1cebe95a660d0431be78aab 851 SMART SM00965 55 105 2.5E-11 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_4495 aa08c979a1cebe95a660d0431be78aab 851 Gene3D G3DSA:2.170.130.10 130 246 1.3E-27 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_4495 aa08c979a1cebe95a660d0431be78aab 851 Pfam PF00593 TonB dependent receptor 339 848 1.9E-42 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_4495 aa08c979a1cebe95a660d0431be78aab 851 Pfam PF07660 Secretin and TonB N terminus short domain 55 104 1.5E-7 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_4495 aa08c979a1cebe95a660d0431be78aab 851 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 130 849 2.1E-128 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 PA257_4495 aa08c979a1cebe95a660d0431be78aab 851 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 235 1.2E-18 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_4495 aa08c979a1cebe95a660d0431be78aab 851 SUPERFAMILY SSF56935 109 849 2.81E-90 T 12-10-2018 PA257_4495 aa08c979a1cebe95a660d0431be78aab 851 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 126 848 3.0E-107 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 PA257_5538 f7f9519411539de56ac61298c59fa69b 458 SUPERFAMILY SSF48557 3 454 9.42E-132 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 PA257_5538 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 174 192 1.7E-27 T 12-10-2018 IPR000362 Fumarate lyase family PA257_5538 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 265 292 1.7E-27 T 12-10-2018 IPR000362 Fumarate lyase family PA257_5538 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 128 146 1.7E-27 T 12-10-2018 IPR000362 Fumarate lyase family PA257_5538 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 311 327 1.7E-27 T 12-10-2018 IPR000362 Fumarate lyase family PA257_5538 f7f9519411539de56ac61298c59fa69b 458 Gene3D G3DSA:1.10.40.30 402 453 2.0E-21 T 12-10-2018 PA257_5538 f7f9519411539de56ac61298c59fa69b 458 Pfam PF10415 Fumarase C C-terminus 402 454 5.7E-20 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_5538 f7f9519411539de56ac61298c59fa69b 458 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 456 78.574 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_5538 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00145 Argininosuccinate lyase family signature 127 149 3.4E-5 T 12-10-2018 PA257_5538 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00145 Argininosuccinate lyase family signature 169 189 3.4E-5 T 12-10-2018 PA257_5538 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 327 3.4E-5 T 12-10-2018 PA257_5538 f7f9519411539de56ac61298c59fa69b 458 Gene3D G3DSA:1.10.275.10 5 132 2.1E-47 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal PA257_5538 f7f9519411539de56ac61298c59fa69b 458 Pfam PF00206 Lyase 12 336 4.2E-86 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal PA257_5538 f7f9519411539de56ac61298c59fa69b 458 Gene3D G3DSA:1.20.200.10 133 400 7.8E-96 T 12-10-2018 PA257_5538 f7f9519411539de56ac61298c59fa69b 458 ProSitePatterns PS00163 Fumarate lyases signature. 311 320 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PA257_6320 87bb11c40d6046c2505bfc2eac48686e 301 Pfam PF03466 LysR substrate binding domain 91 295 3.4E-46 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6320 87bb11c40d6046c2505bfc2eac48686e 301 SUPERFAMILY SSF53850 91 299 5.31E-39 T 12-10-2018 PA257_6320 87bb11c40d6046c2505bfc2eac48686e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6320 87bb11c40d6046c2505bfc2eac48686e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6320 87bb11c40d6046c2505bfc2eac48686e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6320 87bb11c40d6046c2505bfc2eac48686e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-25 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6320 87bb11c40d6046c2505bfc2eac48686e 301 Gene3D G3DSA:1.10.10.10 1 89 1.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6320 87bb11c40d6046c2505bfc2eac48686e 301 Gene3D G3DSA:3.40.190.10 163 270 1.7E-67 T 12-10-2018 PA257_6320 87bb11c40d6046c2505bfc2eac48686e 301 Gene3D G3DSA:3.40.190.10 90 288 1.7E-67 T 12-10-2018 PA257_6320 87bb11c40d6046c2505bfc2eac48686e 301 SUPERFAMILY SSF46785 2 83 1.07E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6955 5a7a82d3189f6ac1a2be909f40b6748d 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 42 60 2.7E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_6955 5a7a82d3189f6ac1a2be909f40b6748d 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 42 2.7E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_6955 5a7a82d3189f6ac1a2be909f40b6748d 257 SMART SM00420 10 62 9.0E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_6955 5a7a82d3189f6ac1a2be909f40b6748d 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 10 44 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PA257_6955 5a7a82d3189f6ac1a2be909f40b6748d 257 SMART SM01134 73 234 2.2E-59 T 12-10-2018 PA257_6955 5a7a82d3189f6ac1a2be909f40b6748d 257 Pfam PF00455 DeoR C terminal sensor domain 79 233 1.1E-43 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain PA257_6955 5a7a82d3189f6ac1a2be909f40b6748d 257 Pfam PF08220 DeoR-like helix-turn-helix domain 10 61 9.6E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_6955 5a7a82d3189f6ac1a2be909f40b6748d 257 SUPERFAMILY SSF46785 8 65 2.02E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6955 5a7a82d3189f6ac1a2be909f40b6748d 257 Gene3D G3DSA:1.10.10.10 2 56 1.6E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6955 5a7a82d3189f6ac1a2be909f40b6748d 257 SUPERFAMILY SSF100950 77 234 6.49E-31 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_4607 c476ea054784f8f340c4a91d07ed6c80 177 Pfam PF00877 NlpC/P60 family 56 164 7.1E-30 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain PA257_4607 c476ea054784f8f340c4a91d07ed6c80 177 Gene3D G3DSA:3.90.1720.10 10 164 9.3E-42 T 12-10-2018 PA257_4607 c476ea054784f8f340c4a91d07ed6c80 177 SUPERFAMILY SSF54001 36 167 3.09E-40 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_4464 db4ee5ecd03d67e62aa5ed0471330c59 515 Pfam PF00571 CBS domain 374 423 1.1E-7 T 12-10-2018 IPR000644 CBS domain PA257_4464 db4ee5ecd03d67e62aa5ed0471330c59 515 SUPERFAMILY SSF54631 291 426 3.77E-21 T 12-10-2018 PA257_4464 db4ee5ecd03d67e62aa5ed0471330c59 515 Gene3D G3DSA:3.30.465.10 430 514 8.8E-20 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_4464 db4ee5ecd03d67e62aa5ed0471330c59 515 Pfam PF03471 Transporter associated domain 439 514 2.3E-18 T 12-10-2018 IPR005170 Transporter-associated domain PA257_4464 db4ee5ecd03d67e62aa5ed0471330c59 515 Gene3D G3DSA:3.10.580.10 283 429 3.4E-33 T 12-10-2018 PA257_4464 db4ee5ecd03d67e62aa5ed0471330c59 515 SMART SM01091 437 515 4.7E-22 T 12-10-2018 IPR005170 Transporter-associated domain PA257_4464 db4ee5ecd03d67e62aa5ed0471330c59 515 Pfam PF03741 Integral membrane protein TerC family 15 203 5.9E-47 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 PA257_4464 db4ee5ecd03d67e62aa5ed0471330c59 515 SUPERFAMILY SSF56176 438 514 3.0E-18 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_6573 3ae914665428118c0b014cf54041f6d1 403 Gene3D G3DSA:3.50.50.60 2 340 1.5E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6573 3ae914665428118c0b014cf54041f6d1 403 Gene3D G3DSA:3.30.9.50 79 271 1.5E-114 T 12-10-2018 PA257_6573 3ae914665428118c0b014cf54041f6d1 403 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 PA257_6573 3ae914665428118c0b014cf54041f6d1 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 1.4E-17 T 12-10-2018 PA257_6573 3ae914665428118c0b014cf54041f6d1 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.4E-17 T 12-10-2018 PA257_6573 3ae914665428118c0b014cf54041f6d1 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 1.4E-17 T 12-10-2018 PA257_6573 3ae914665428118c0b014cf54041f6d1 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.4E-17 T 12-10-2018 PA257_6573 3ae914665428118c0b014cf54041f6d1 403 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 2 392 5.0E-136 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 PA257_6573 3ae914665428118c0b014cf54041f6d1 403 SUPERFAMILY SSF51905 2 384 4.83E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6573 3ae914665428118c0b014cf54041f6d1 403 Pfam PF01494 FAD binding domain 2 343 1.2E-23 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 PA257_1939 bf62c6dde001fe2e471a850ff7986827 330 SUPERFAMILY SSF51735 1 326 1.45E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1939 bf62c6dde001fe2e471a850ff7986827 330 Gene3D G3DSA:3.90.25.10 167 310 1.0E-117 T 12-10-2018 PA257_1939 bf62c6dde001fe2e471a850ff7986827 330 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 328 1.8E-130 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 PA257_1939 bf62c6dde001fe2e471a850ff7986827 330 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 329 47.906 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 PA257_1939 bf62c6dde001fe2e471a850ff7986827 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 241 6.1E-41 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_1939 bf62c6dde001fe2e471a850ff7986827 330 Gene3D G3DSA:3.40.50.720 4 322 1.0E-117 T 12-10-2018 PA257_0618 5c19085198b925bdaff593a60d4ab21e 158 Gene3D G3DSA:3.40.630.30 1 158 2.0E-55 T 12-10-2018 PA257_0618 5c19085198b925bdaff593a60d4ab21e 158 Pfam PF00583 Acetyltransferase (GNAT) family 41 136 3.2E-19 T 12-10-2018 IPR000182 GNAT domain PA257_0618 5c19085198b925bdaff593a60d4ab21e 158 SUPERFAMILY SSF55729 3 152 5.57E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 248 270 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 TIGRFAM TIGR01807 CM_P2: chorismate mutase 7 85 5.4E-32 T 12-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:1.20.59.10 7 96 8.7E-30 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:3.40.190.10 99 270 3.7E-59 T 12-10-2018 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 310 317 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:3.30.70.260 275 364 2.1E-28 T 12-10-2018 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 SUPERFAMILY SSF55021 267 362 4.93E-28 T 12-10-2018 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 SUPERFAMILY SSF53850 96 281 1.19E-60 T 12-10-2018 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 SUPERFAMILY SSF48600 6 99 2.75E-19 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 Pfam PF01817 Chorismate mutase type II 11 93 1.9E-22 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 PIRSF PIRSF001500 1 365 8.1E-149 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 SMART SM00830 11 95 1.1E-26 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 Pfam PF01842 ACT domain 283 348 9.9E-11 T 12-10-2018 IPR002912 ACT domain PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 Pfam PF00800 Prephenate dehydratase 97 274 1.4E-62 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PA257_2135 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:3.40.190.10 177 261 3.7E-59 T 12-10-2018 PA257_3499 f10bdc311a00054ac421d1885256ab5f 319 PIRSF PIRSF000103 18 316 3.8E-75 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_3499 f10bdc311a00054ac421d1885256ab5f 319 SUPERFAMILY SSF51735 26 178 5.67E-23 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3499 f10bdc311a00054ac421d1885256ab5f 319 Gene3D G3DSA:3.40.50.720 19 181 5.9E-36 T 12-10-2018 PA257_3499 f10bdc311a00054ac421d1885256ab5f 319 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 26 178 4.1E-17 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PA257_3499 f10bdc311a00054ac421d1885256ab5f 319 Gene3D G3DSA:1.10.1040.10 182 317 7.1E-48 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_3499 f10bdc311a00054ac421d1885256ab5f 319 SUPERFAMILY SSF48179 196 308 5.55E-6 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_1051 99ff47a9754041447ea6046bdf1124d4 419 Gene3D G3DSA:1.20.1250.20 4 202 3.8E-38 T 12-10-2018 PA257_1051 99ff47a9754041447ea6046bdf1124d4 419 Pfam PF07690 Major Facilitator Superfamily 18 362 1.7E-47 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1051 99ff47a9754041447ea6046bdf1124d4 419 SUPERFAMILY SSF103473 9 400 2.75E-74 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1051 99ff47a9754041447ea6046bdf1124d4 419 Gene3D G3DSA:1.20.1250.20 213 399 1.2E-26 T 12-10-2018 PA257_6444 46575be49be3b252d5714d477aa7887d 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.7E-41 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PA257_6444 46575be49be3b252d5714d477aa7887d 90 PIRSF PIRSF029827 1 90 1.1E-40 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PA257_6444 46575be49be3b252d5714d477aa7887d 90 SUPERFAMILY SSF111148 1 89 2.62E-41 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 PA257_6444 46575be49be3b252d5714d477aa7887d 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.539 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PA257_6444 46575be49be3b252d5714d477aa7887d 90 Gene3D G3DSA:1.10.3880.10 1 90 4.7E-42 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 PA257_6444 46575be49be3b252d5714d477aa7887d 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 74 2.0E-39 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PA257_1518 4b90b4ba6d6527a6615579b5bb6488fd 335 PIRSF PIRSF000876 1 335 7.5E-98 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_1518 4b90b4ba6d6527a6615579b5bb6488fd 335 Pfam PF00072 Response regulator receiver domain 4 102 3.1E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1518 4b90b4ba6d6527a6615579b5bb6488fd 335 SUPERFAMILY SSF52738 151 334 1.96E-61 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal PA257_1518 4b90b4ba6d6527a6615579b5bb6488fd 335 SUPERFAMILY SSF52172 2 104 1.42E-20 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1518 4b90b4ba6d6527a6615579b5bb6488fd 335 Gene3D G3DSA:3.40.50.12740 1 126 5.1E-22 T 12-10-2018 PA257_1518 4b90b4ba6d6527a6615579b5bb6488fd 335 Gene3D G3DSA:3.40.50.180 145 335 9.7E-63 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal PA257_1518 4b90b4ba6d6527a6615579b5bb6488fd 335 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 335 32.552 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_1518 4b90b4ba6d6527a6615579b5bb6488fd 335 SMART SM00448 1 118 3.6E-9 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1518 4b90b4ba6d6527a6615579b5bb6488fd 335 Pfam PF01339 CheB methylesterase 154 330 2.0E-57 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_2158 f8979af61565d9f0a81379bce2775104 494 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 470 3.2E-142 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PA257_2158 f8979af61565d9f0a81379bce2775104 494 Gene3D G3DSA:1.10.10.350 371 494 1.3E-35 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PA257_2158 f8979af61565d9f0a81379bce2775104 494 SUPERFAMILY SSF52374 4 308 1.42E-110 T 12-10-2018 PA257_2158 f8979af61565d9f0a81379bce2775104 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 203 1.3E-21 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_2158 f8979af61565d9f0a81379bce2775104 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.3E-21 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_2158 f8979af61565d9f0a81379bce2775104 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.3E-21 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_2158 f8979af61565d9f0a81379bce2775104 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 217 1.3E-21 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_2158 f8979af61565d9f0a81379bce2775104 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.3E-21 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_2158 f8979af61565d9f0a81379bce2775104 494 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 3 471 30.007 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PA257_2158 f8979af61565d9f0a81379bce2775104 494 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_2158 f8979af61565d9f0a81379bce2775104 494 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 320 9.3E-110 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PA257_2158 f8979af61565d9f0a81379bce2775104 494 Gene3D G3DSA:3.40.50.620 1 329 6.9E-155 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2158 f8979af61565d9f0a81379bce2775104 494 SUPERFAMILY SSF48163 314 472 7.59E-34 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PA257_5696 87a14727172f4e89405ec3d9961147ba 294 Pfam PF11920 Protein of unknown function (DUF3438) 8 284 7.0E-120 T 12-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 PA257_5696 87a14727172f4e89405ec3d9961147ba 294 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 11 275 1.2E-112 T 12-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 PA257_6757 3ee3011b07dd6d5bbd84285472ca9890 323 SUPERFAMILY SSF53850 37 320 9.86E-72 T 12-10-2018 PA257_6757 3ee3011b07dd6d5bbd84285472ca9890 323 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 3 309 7.5E-97 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 PA257_6757 3ee3011b07dd6d5bbd84285472ca9890 323 Gene3D G3DSA:3.40.190.10 124 267 4.9E-119 T 12-10-2018 PA257_6757 3ee3011b07dd6d5bbd84285472ca9890 323 Gene3D G3DSA:3.40.190.10 39 311 4.9E-119 T 12-10-2018 PA257_6757 3ee3011b07dd6d5bbd84285472ca9890 323 Pfam PF12849 PBP superfamily domain 36 295 1.3E-33 T 12-10-2018 IPR024370 PBP domain PA257_0429 8d09a70c14ccfec94c1f6daef25e6a91 179 SUPERFAMILY SSF52317 8 178 2.69E-43 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_0429 8d09a70c14ccfec94c1f6daef25e6a91 179 Gene3D G3DSA:3.40.50.880 1 179 6.2E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_0429 8d09a70c14ccfec94c1f6daef25e6a91 179 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 177 4.4E-44 T 12-10-2018 IPR006286 Deglycase PfpI PA257_0429 8d09a70c14ccfec94c1f6daef25e6a91 179 Pfam PF01965 DJ-1/PfpI family 10 175 5.6E-45 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_0426 b4e95bbc776f6b27eeb2a5d9f6b4c5ed 586 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 96 106 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PA257_0426 b4e95bbc776f6b27eeb2a5d9f6b4c5ed 586 Pfam PF00920 Dehydratase family 8 577 1.7E-219 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PA257_0426 b4e95bbc776f6b27eeb2a5d9f6b4c5ed 586 SUPERFAMILY SSF143975 2 392 4.18E-131 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PA257_0426 b4e95bbc776f6b27eeb2a5d9f6b4c5ed 586 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 1 580 7.6E-247 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PA257_0426 b4e95bbc776f6b27eeb2a5d9f6b4c5ed 586 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 481 492 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PA257_0426 b4e95bbc776f6b27eeb2a5d9f6b4c5ed 586 SUPERFAMILY SSF52016 393 580 1.18E-59 T 12-10-2018 PA257_0426 b4e95bbc776f6b27eeb2a5d9f6b4c5ed 586 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 580 42.389 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PA257_0426 b4e95bbc776f6b27eeb2a5d9f6b4c5ed 586 Gene3D G3DSA:3.50.30.80 393 545 6.3E-54 T 12-10-2018 PA257_1439 637fb760fa56241669b19214e8871acb 90 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 15 86 7.0E-5 T 12-10-2018 PA257_1439 637fb760fa56241669b19214e8871acb 90 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 82 2.8E-11 T 12-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB PA257_1439 637fb760fa56241669b19214e8871acb 90 PIRSF PIRSF017854 5 90 1.4E-35 T 12-10-2018 IPR016704 Conjugal transfer, TrbD PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 ProSitePatterns PS00042 Crp-type HTH domain signature. 172 195 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 SMART SM00100 3 126 2.5E-27 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 Gene3D G3DSA:1.10.10.10 143 211 1.2E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 SUPERFAMILY SSF51206 12 141 1.22E-34 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 Pfam PF00325 Bacterial regulatory proteins, crp family 170 200 3.0E-14 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 SMART SM00419 164 212 6.6E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 201 3.3E-9 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 170 186 3.3E-9 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 Gene3D G3DSA:2.60.120.10 11 142 1.9E-43 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 31 47 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 Pfam PF00027 Cyclic nucleotide-binding domain 22 114 4.9E-22 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 SUPERFAMILY SSF46785 143 211 6.0E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0787 d913cf1a8f4296daab521d724340c0d0 214 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 72 93 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site PA257_0159 68122ac6044f525cbeee1ca4685c071b 523 SMART SM00382 36 220 1.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0159 68122ac6044f525cbeee1ca4685c071b 523 Gene3D G3DSA:3.40.50.300 6 239 3.1E-60 T 12-10-2018 PA257_0159 68122ac6044f525cbeee1ca4685c071b 523 SUPERFAMILY SSF52540 259 487 1.36E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0159 68122ac6044f525cbeee1ca4685c071b 523 Gene3D G3DSA:3.40.50.300 259 500 6.7E-29 T 12-10-2018 PA257_0159 68122ac6044f525cbeee1ca4685c071b 523 SUPERFAMILY SSF52540 10 226 3.11E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0159 68122ac6044f525cbeee1ca4685c071b 523 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0159 68122ac6044f525cbeee1ca4685c071b 523 Pfam PF00005 ABC transporter 28 173 1.5E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0159 68122ac6044f525cbeee1ca4685c071b 523 Pfam PF00005 ABC transporter 280 436 6.0E-6 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_5528 2dc50e8d3f2a198c7f882444b6ce96cd 155 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 4 151 1.2E-46 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 PA257_5528 2dc50e8d3f2a198c7f882444b6ce96cd 155 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 151 23.418 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 PA257_5528 2dc50e8d3f2a198c7f882444b6ce96cd 155 Pfam PF03968 OstA-like protein 15 125 2.6E-26 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal PA257_5528 2dc50e8d3f2a198c7f882444b6ce96cd 155 Gene3D G3DSA:2.60.450.10 6 155 4.8E-56 T 12-10-2018 PA257_3032 b831b21cae78593c6824a01caf618962 209 SMART SM00563 34 157 4.5E-17 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_3032 b831b21cae78593c6824a01caf618962 209 SUPERFAMILY SSF69593 17 205 1.12E-32 T 12-10-2018 PA257_3032 b831b21cae78593c6824a01caf618962 209 Pfam PF01553 Acyltransferase 33 154 2.1E-15 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 Gene3D G3DSA:3.40.50.12740 668 791 6.9E-47 T 12-10-2018 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 Pfam PF00512 His Kinase A (phospho-acceptor) domain 419 482 1.7E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 SMART SM00387 530 645 1.2E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 SUPERFAMILY SSF55874 472 642 2.62E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 SUPERFAMILY SSF47384 404 484 1.12E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 1.0E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 623 1.0E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 598 1.0E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 642 1.0E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 Pfam PF07695 7TM diverse intracellular signalling 184 386 3.3E-56 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 Pfam PF07696 7TMR-DISM extracellular 2 32 171 3.4E-36 T 12-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 Gene3D G3DSA:1.10.287.130 383 481 2.1E-18 T 12-10-2018 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 SMART SM00388 418 483 5.3E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 Gene3D G3DSA:3.30.565.10 482 648 3.0E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 Pfam PF00072 Response regulator receiver domain 670 780 4.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 SUPERFAMILY SSF52172 667 785 1.05E-39 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 SMART SM00448 668 781 5.5E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 644 3.7E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1178 5c1c57385326bddaacd9e1854dd68708 795 Gene3D G3DSA:2.60.40.2380 29 173 1.1E-29 T 12-10-2018 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 SUPERFAMILY SSF56645 7 238 6.54E-77 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 SUPERFAMILY SSF47203 243 390 3.54E-42 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 1.1E-34 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 Gene3D G3DSA:1.10.540.10 2 134 3.8E-42 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 227 6.2E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 PIRSF PIRSF016578 149 391 2.2E-10 T 12-10-2018 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 PIRSF PIRSF016578 15 94 0.11 T 12-10-2018 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 385 9.5E-28 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 Gene3D G3DSA:2.40.110.10 135 239 3.6E-38 T 12-10-2018 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_0585 8030e68d0852747dddc47237a6bc3920 393 Gene3D G3DSA:1.20.140.10 241 393 6.3E-42 T 12-10-2018 PA257_5612 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.9E-14 T 12-10-2018 PA257_5612 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 1.9E-14 T 12-10-2018 PA257_5612 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 1.9E-14 T 12-10-2018 PA257_5612 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 1.9E-14 T 12-10-2018 PA257_5612 19910400c95e32f29ceda1ad238b4262 435 Gene3D G3DSA:3.50.50.100 1 412 5.4E-112 T 12-10-2018 PA257_5612 19910400c95e32f29ceda1ad238b4262 435 SUPERFAMILY SSF51905 2 319 5.37E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5612 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.8E-7 T 12-10-2018 PA257_5612 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 1.8E-7 T 12-10-2018 PA257_5612 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.8E-7 T 12-10-2018 PA257_5612 19910400c95e32f29ceda1ad238b4262 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 341 6.8E-60 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_0586 47bf9a947eae5e36e9634e18c9de28ff 302 SUPERFAMILY SSF46785 4 81 6.56E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0586 47bf9a947eae5e36e9634e18c9de28ff 302 Gene3D G3DSA:1.10.10.10 9 73 2.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0586 47bf9a947eae5e36e9634e18c9de28ff 302 Gene3D G3DSA:3.40.190.10 103 288 5.2E-55 T 12-10-2018 PA257_0586 47bf9a947eae5e36e9634e18c9de28ff 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0586 47bf9a947eae5e36e9634e18c9de28ff 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0586 47bf9a947eae5e36e9634e18c9de28ff 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0586 47bf9a947eae5e36e9634e18c9de28ff 302 Pfam PF03466 LysR substrate binding domain 92 292 1.0E-40 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0586 47bf9a947eae5e36e9634e18c9de28ff 302 Gene3D G3DSA:3.40.190.10 163 261 5.2E-55 T 12-10-2018 PA257_0586 47bf9a947eae5e36e9634e18c9de28ff 302 SUPERFAMILY SSF53850 94 295 3.8E-39 T 12-10-2018 PA257_0586 47bf9a947eae5e36e9634e18c9de28ff 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0195 7b0309e4b193a973e860c3ccbbec3ab6 196 SUPERFAMILY SSF54980 127 195 9.35E-11 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_0195 7b0309e4b193a973e860c3ccbbec3ab6 196 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 71 100 - T 12-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site PA257_0195 7b0309e4b193a973e860c3ccbbec3ab6 196 Pfam PF09186 Domain of unknown function (DUF1949) 133 188 2.0E-11 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal PA257_0195 7b0309e4b193a973e860c3ccbbec3ab6 196 SUPERFAMILY SSF54211 7 121 1.14E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_0195 7b0309e4b193a973e860c3ccbbec3ab6 196 Gene3D G3DSA:3.30.230.30 1 125 9.2E-45 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily PA257_0195 7b0309e4b193a973e860c3ccbbec3ab6 196 Gene3D G3DSA:3.30.70.240 126 191 1.0E-5 T 12-10-2018 PA257_0195 7b0309e4b193a973e860c3ccbbec3ab6 196 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 1.0E-26 T 12-10-2018 IPR001498 Impact, N-terminal PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 Gene3D G3DSA:2.40.30.170 330 413 8.4E-13 T 12-10-2018 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 SUPERFAMILY SSF111369 264 345 3.53E-5 T 12-10-2018 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 Gene3D G3DSA:2.40.50.100 64 129 3.1E-8 T 12-10-2018 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 Gene3D G3DSA:2.40.50.100 293 329 8.4E-13 T 12-10-2018 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 73 93 1.2E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 31 54 1.2E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 338 362 1.2E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 326 1.2E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 385 1.2E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 420 1.2E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 440 1.2E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 Gene3D G3DSA:1.10.287.470 166 292 8.4E-13 T 12-10-2018 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 Pfam PF00529 HlyD membrane-fusion protein of T1SS 33 397 8.0E-19 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_1867 c155f4eff3268ecbe1a4713336f806fa 441 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 20 441 2.9E-142 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PA257_2573 f537f5687c5fd938104738ad58e53127 265 Gene3D G3DSA:1.20.58.340 208 265 1.3E-22 T 12-10-2018 PA257_2573 f537f5687c5fd938104738ad58e53127 265 SUPERFAMILY SSF144083 202 262 6.93E-19 T 12-10-2018 PA257_2573 f537f5687c5fd938104738ad58e53127 265 Gene3D G3DSA:3.30.460.20 1 75 9.1E-9 T 12-10-2018 PA257_2573 f537f5687c5fd938104738ad58e53127 265 Pfam PF01544 CorA-like Mg2+ transporter protein 3 261 2.1E-46 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PA257_2573 f537f5687c5fd938104738ad58e53127 265 SUPERFAMILY SSF143865 1 191 1.7E-42 T 12-10-2018 PA257_2573 f537f5687c5fd938104738ad58e53127 265 Gene3D G3DSA:1.20.58.340 76 186 3.4E-27 T 12-10-2018 PA257_4444 8d35fb4644a054036f6911b7d9bbf22c 116 Pfam PF03795 YCII-related domain 1 116 8.3E-31 T 12-10-2018 IPR005545 YCII-related PA257_4444 8d35fb4644a054036f6911b7d9bbf22c 116 Gene3D G3DSA:3.30.70.1060 1 116 1.1E-49 T 12-10-2018 PA257_4444 8d35fb4644a054036f6911b7d9bbf22c 116 SUPERFAMILY SSF54909 1 116 1.15E-36 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 Pfam PF13437 HlyD family secretion protein 216 319 2.2E-13 T 12-10-2018 PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 Gene3D G3DSA:2.40.50.100 48 81 4.0E-13 T 12-10-2018 PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 Gene3D G3DSA:1.10.287.470 187 215 1.9E-15 T 12-10-2018 PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 Pfam PF13533 Biotin-lipoyl like 50 96 2.2E-13 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 SUPERFAMILY SSF111369 117 174 1.96E-6 T 12-10-2018 PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 Gene3D G3DSA:1.10.287.470 118 179 4.0E-9 T 12-10-2018 PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 Gene3D G3DSA:2.40.50.100 216 250 1.9E-15 T 12-10-2018 PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 SUPERFAMILY SSF111369 43 123 3.4E-9 T 12-10-2018 PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 Gene3D G3DSA:2.40.30.170 251 301 1.9E-15 T 12-10-2018 PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 SUPERFAMILY SSF111369 186 284 2.35E-6 T 12-10-2018 PA257_6585 1484a98b8341ad064e92df891a4f7a0f 357 Gene3D G3DSA:1.10.287.470 82 113 4.0E-13 T 12-10-2018 PA257_0709 3847eba0a023d26aed7a4833affc60bb 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 PA257_0709 3847eba0a023d26aed7a4833affc60bb 52 Pfam PF01679 Proteolipid membrane potential modulator 2 49 2.5E-22 T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 Gene3D G3DSA:2.40.40.20 581 708 3.1E-38 T 12-10-2018 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 Pfam PF01568 Molydopterin dinucleotide binding domain 591 700 5.7E-28 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 Gene3D G3DSA:3.40.228.10 144 345 1.9E-190 T 12-10-2018 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 SUPERFAMILY SSF50692 562 706 1.15E-41 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 PIRSF PIRSF036643 2 731 1.2E-169 T 12-10-2018 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 8 56 8.5E-18 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 438 455 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 Pfam PF00384 Molybdopterin oxidoreductase 79 492 5.8E-84 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 Gene3D G3DSA:2.20.25.90 3 59 1.1E-15 T 12-10-2018 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 Gene3D G3DSA:1.10.10.1100 852 902 1.6E-6 T 12-10-2018 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 SMART SM00926 7 60 2.2E-19 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 Pfam PF04324 BFD-like [2Fe-2S] binding domain 853 899 5.8E-9 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 Gene3D G3DSA:3.40.50.740 80 547 1.9E-190 T 12-10-2018 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 12 30 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 PA257_3992 9666a6452a2af3e6b325a11452c8f3e1 908 SUPERFAMILY SSF53706 6 499 1.18E-197 T 12-10-2018 PA257_2839 3aaa83da5f7ab17846598c2964c84fe9 324 SUPERFAMILY SSF53686 6 312 2.23E-98 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_2839 3aaa83da5f7ab17846598c2964c84fe9 324 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PA257_2839 3aaa83da5f7ab17846598c2964c84fe9 324 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 313 1.4E-136 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 PA257_2839 3aaa83da5f7ab17846598c2964c84fe9 324 Gene3D G3DSA:3.40.50.1100 45 147 2.8E-126 T 12-10-2018 PA257_2839 3aaa83da5f7ab17846598c2964c84fe9 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 302 1.5E-66 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_2839 3aaa83da5f7ab17846598c2964c84fe9 324 Gene3D G3DSA:3.40.50.1100 12 308 2.8E-126 T 12-10-2018 PA257_2839 3aaa83da5f7ab17846598c2964c84fe9 324 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 313 2.5E-131 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 PA257_0120 ea2579e5e0b3df6225aad655a87fb9b2 345 SUPERFAMILY SSF53901 7 197 4.9E-9 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_0120 ea2579e5e0b3df6225aad655a87fb9b2 345 SUPERFAMILY SSF53901 182 317 6.38E-10 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_0120 ea2579e5e0b3df6225aad655a87fb9b2 345 Gene3D G3DSA:3.40.47.10 94 333 2.4E-10 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_6582 f3c952a7e9c540ff3722e1f0cc43d02c 152 SUPERFAMILY SSF88697 3 151 1.91E-58 T 12-10-2018 IPR015947 PUA-like superfamily PA257_6582 f3c952a7e9c540ff3722e1f0cc43d02c 152 Gene3D G3DSA:3.10.590.10 1 152 2.3E-62 T 12-10-2018 PA257_6582 f3c952a7e9c540ff3722e1f0cc43d02c 152 Pfam PF01878 EVE domain 3 147 3.8E-53 T 12-10-2018 IPR002740 EVE domain PA257_5949 e97c186c1ef2df1ed9a96c3ee67af0b0 1089 Pfam PF00691 OmpA family 908 947 1.9E-4 T 12-10-2018 IPR006665 OmpA-like domain PA257_5949 e97c186c1ef2df1ed9a96c3ee67af0b0 1089 SUPERFAMILY SSF103088 905 946 1.7E-5 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_5949 e97c186c1ef2df1ed9a96c3ee67af0b0 1089 Gene3D G3DSA:3.30.1330.60 900 959 4.3E-5 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_5949 e97c186c1ef2df1ed9a96c3ee67af0b0 1089 Pfam PF05359 Domain of Unknown Function (DUF748) 140 291 5.0E-33 T 12-10-2018 IPR008023 Protein of unknown function DUF748 PA257_5949 e97c186c1ef2df1ed9a96c3ee67af0b0 1089 Pfam PF05359 Domain of Unknown Function (DUF748) 477 628 5.3E-32 T 12-10-2018 IPR008023 Protein of unknown function DUF748 PA257_5949 e97c186c1ef2df1ed9a96c3ee67af0b0 1089 Pfam PF05359 Domain of Unknown Function (DUF748) 693 838 7.0E-41 T 12-10-2018 IPR008023 Protein of unknown function DUF748 PA257_5710 01e81c216453a5b34c07b0c7acad8e0a 90 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 67 9.3E-17 T 12-10-2018 IPR022789 Antitoxin ParD PA257_5710 01e81c216453a5b34c07b0c7acad8e0a 90 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 62 1.6E-10 T 12-10-2018 IPR022789 Antitoxin ParD PA257_5710 01e81c216453a5b34c07b0c7acad8e0a 90 Gene3D G3DSA:1.10.8.1250 10 89 3.3E-15 T 12-10-2018 IPR038296 Antitoxin ParD superfamily PA257_5710 01e81c216453a5b34c07b0c7acad8e0a 90 SUPERFAMILY SSF47598 1 43 2.67E-11 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PA257_3839 127e47e8bbb57e9b776d54a945010bb9 403 PRINTS PR01035 Tetracycline resistance protein signature 79 103 8.3E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_3839 127e47e8bbb57e9b776d54a945010bb9 403 PRINTS PR01035 Tetracycline resistance protein signature 258 278 8.3E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_3839 127e47e8bbb57e9b776d54a945010bb9 403 PRINTS PR01035 Tetracycline resistance protein signature 344 367 8.3E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_3839 127e47e8bbb57e9b776d54a945010bb9 403 SUPERFAMILY SSF103473 13 388 1.96E-47 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3839 127e47e8bbb57e9b776d54a945010bb9 403 Pfam PF07690 Major Facilitator Superfamily 21 232 5.1E-22 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3839 127e47e8bbb57e9b776d54a945010bb9 403 Gene3D G3DSA:1.20.1250.20 14 389 3.8E-45 T 12-10-2018 PA257_3993 05564e8f930a92ff73b6c9fd340c8918 245 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 234 4.0E-94 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_3993 05564e8f930a92ff73b6c9fd340c8918 245 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 212 4.7E-47 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PA257_3993 05564e8f930a92ff73b6c9fd340c8918 245 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_3993 05564e8f930a92ff73b6c9fd340c8918 245 Gene3D G3DSA:3.30.950.10 118 240 3.9E-38 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PA257_3993 05564e8f930a92ff73b6c9fd340c8918 245 Gene3D G3DSA:3.40.1010.10 1 117 1.6E-43 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PA257_3993 05564e8f930a92ff73b6c9fd340c8918 245 SUPERFAMILY SSF53790 1 235 4.58E-71 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PA257_4866 53b4504204d609fbc9c8a09dda61ec38 347 Pfam PF13103 TonB C terminal 258 322 1.4E-11 T 12-10-2018 PA257_4866 53b4504204d609fbc9c8a09dda61ec38 347 Gene3D G3DSA:3.30.1150.10 225 347 4.0E-36 T 12-10-2018 PA257_4866 53b4504204d609fbc9c8a09dda61ec38 347 TIGRFAM TIGR02794 tolA_full: protein TolA 15 342 1.2E-60 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 PA257_4866 53b4504204d609fbc9c8a09dda61ec38 347 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 266 342 4.6E-14 T 12-10-2018 IPR006260 TonB/TolA, C-terminal PA257_4866 53b4504204d609fbc9c8a09dda61ec38 347 SUPERFAMILY SSF74653 229 344 3.34E-25 T 12-10-2018 PA257_3704 e2f3c21acf3776cfb08b036e3c747b55 474 SUPERFAMILY SSF46785 1 70 1.75E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3704 e2f3c21acf3776cfb08b036e3c747b55 474 SUPERFAMILY SSF53383 86 463 1.65E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3704 e2f3c21acf3776cfb08b036e3c747b55 474 Pfam PF00155 Aminotransferase class I and II 105 461 1.1E-36 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_3704 e2f3c21acf3776cfb08b036e3c747b55 474 Gene3D G3DSA:1.10.10.10 1 67 2.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3704 e2f3c21acf3776cfb08b036e3c747b55 474 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.6E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_3704 e2f3c21acf3776cfb08b036e3c747b55 474 Gene3D G3DSA:3.90.1150.10 96 463 1.6E-103 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_3704 e2f3c21acf3776cfb08b036e3c747b55 474 Gene3D G3DSA:3.40.640.10 141 360 1.6E-103 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_3704 e2f3c21acf3776cfb08b036e3c747b55 474 SMART SM00345 7 66 7.5E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6374 1f4d1b22dc03b836f3f061e29a2dde44 299 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 268 2.6E-50 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6374 1f4d1b22dc03b836f3f061e29a2dde44 299 SMART SM00062 37 270 3.0E-65 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6374 1f4d1b22dc03b836f3f061e29a2dde44 299 Gene3D G3DSA:3.40.190.10 132 227 3.1E-98 T 12-10-2018 PA257_6374 1f4d1b22dc03b836f3f061e29a2dde44 299 Gene3D G3DSA:3.40.190.10 27 273 3.1E-98 T 12-10-2018 PA257_6374 1f4d1b22dc03b836f3f061e29a2dde44 299 SUPERFAMILY SSF53850 1 271 1.76E-65 T 12-10-2018 PA257_5766 bd0dcc4b6391bbee3b6fed0ae3855ac3 346 Gene3D G3DSA:1.10.760.10 188 325 1.5E-115 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5766 bd0dcc4b6391bbee3b6fed0ae3855ac3 346 PIRSF PIRSF000294 1 346 2.1E-155 T 12-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 PA257_5766 bd0dcc4b6391bbee3b6fed0ae3855ac3 346 Pfam PF03150 Di-haem cytochrome c peroxidase 53 201 3.7E-49 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 PA257_5766 bd0dcc4b6391bbee3b6fed0ae3855ac3 346 SUPERFAMILY SSF46626 188 344 7.94E-44 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5766 bd0dcc4b6391bbee3b6fed0ae3855ac3 346 Pfam PF00034 Cytochrome c 209 322 9.2E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_5766 bd0dcc4b6391bbee3b6fed0ae3855ac3 346 Gene3D G3DSA:1.10.760.10 48 327 1.5E-115 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5766 bd0dcc4b6391bbee3b6fed0ae3855ac3 346 SUPERFAMILY SSF46626 31 189 1.18E-49 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6068 e462faf45778b436a14fc69a89f2610a 155 Pfam PF01597 Glycine cleavage H-protein 16 132 2.3E-23 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate PA257_6068 e462faf45778b436a14fc69a89f2610a 155 Gene3D G3DSA:2.40.50.100 9 136 4.5E-25 T 12-10-2018 PA257_6068 e462faf45778b436a14fc69a89f2610a 155 SUPERFAMILY SSF51230 10 120 9.94E-23 T 12-10-2018 IPR011053 Single hybrid motif PA257_6251 507bd714f8d95c3341faa3011fa05947 206 Gene3D G3DSA:3.40.50.1820 6 196 1.5E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6251 507bd714f8d95c3341faa3011fa05947 206 SUPERFAMILY SSF53474 5 189 5.2E-20 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6251 507bd714f8d95c3341faa3011fa05947 206 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 190 6.3E-70 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA PA257_3873 a245fb7b832ad65679fde1cf36c8b9fd 723 SMART SM00382 509 694 2.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3873 a245fb7b832ad65679fde1cf36c8b9fd 723 Gene3D G3DSA:3.40.50.300 470 715 1.2E-61 T 12-10-2018 PA257_3873 a245fb7b832ad65679fde1cf36c8b9fd 723 SUPERFAMILY SSF52540 476 709 1.26E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3873 a245fb7b832ad65679fde1cf36c8b9fd 723 Gene3D G3DSA:1.20.1560.10 156 468 2.3E-52 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_3873 a245fb7b832ad65679fde1cf36c8b9fd 723 ProSitePatterns PS00211 ABC transporters family signature. 620 634 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3873 a245fb7b832ad65679fde1cf36c8b9fd 723 Pfam PF00664 ABC transporter transmembrane region 173 432 7.9E-19 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PA257_3873 a245fb7b832ad65679fde1cf36c8b9fd 723 Gene3D G3DSA:3.90.70.10 18 141 1.2E-27 T 12-10-2018 PA257_3873 a245fb7b832ad65679fde1cf36c8b9fd 723 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 20 709 8.0E-272 T 12-10-2018 IPR017750 ATPase, type I secretion system PA257_3873 a245fb7b832ad65679fde1cf36c8b9fd 723 SUPERFAMILY SSF90123 157 467 2.22E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_3873 a245fb7b832ad65679fde1cf36c8b9fd 723 Pfam PF00005 ABC transporter 505 648 4.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 Gene3D G3DSA:3.20.20.450 600 846 4.1E-92 T 12-10-2018 IPR035919 EAL domain superfamily PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 SUPERFAMILY SSF141868 600 844 3.79E-85 T 12-10-2018 IPR035919 EAL domain superfamily PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 SMART SM00091 303 371 7.2E-7 T 12-10-2018 IPR000014 PAS domain PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 421 582 1.9E-43 T 12-10-2018 IPR000160 GGDEF domain PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 Pfam PF00990 Diguanylate cyclase, GGDEF domain 426 581 3.4E-48 T 12-10-2018 IPR000160 GGDEF domain PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 Pfam PF05228 CHASE4 domain 59 219 2.3E-18 T 12-10-2018 IPR007892 CHASE4 PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 SMART SM00052 595 837 8.0E-106 T 12-10-2018 IPR001633 EAL domain PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 SUPERFAMILY SSF55785 291 412 6.28E-16 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 Pfam PF00563 EAL domain 602 832 5.2E-67 T 12-10-2018 IPR001633 EAL domain PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 Gene3D G3DSA:3.30.70.270 419 599 1.2E-58 T 12-10-2018 PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 Gene3D G3DSA:3.30.450.20 289 412 1.8E-15 T 12-10-2018 PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 300 420 4.0E-14 T 12-10-2018 IPR000014 PAS domain PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 SMART SM00267 414 585 1.3E-63 T 12-10-2018 IPR000160 GGDEF domain PA257_3660 d9124ba3e84c6b5079c49cd21eaa3413 864 SUPERFAMILY SSF55073 430 585 9.42E-49 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_4233 d4b8a3af608a783d401b19832b7d3c21 203 SUPERFAMILY SSF46626 16 196 2.89E-30 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4233 d4b8a3af608a783d401b19832b7d3c21 203 Gene3D G3DSA:1.10.760.10 41 203 2.1E-79 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4233 d4b8a3af608a783d401b19832b7d3c21 203 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 4 180 2.4E-83 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PA257_4233 d4b8a3af608a783d401b19832b7d3c21 203 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 4 179 4.6E-86 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PA257_0893 935ee2c19a6ac38216fe3e4cf4bfe679 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.0E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0893 935ee2c19a6ac38216fe3e4cf4bfe679 284 Gene3D G3DSA:3.40.190.10 90 267 4.1E-28 T 12-10-2018 PA257_0893 935ee2c19a6ac38216fe3e4cf4bfe679 284 SUPERFAMILY SSF46785 1 109 7.18E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0893 935ee2c19a6ac38216fe3e4cf4bfe679 284 Pfam PF03466 LysR substrate binding domain 85 281 1.1E-35 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0893 935ee2c19a6ac38216fe3e4cf4bfe679 284 Gene3D G3DSA:1.10.10.10 1 89 2.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0893 935ee2c19a6ac38216fe3e4cf4bfe679 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0893 935ee2c19a6ac38216fe3e4cf4bfe679 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0893 935ee2c19a6ac38216fe3e4cf4bfe679 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0893 935ee2c19a6ac38216fe3e4cf4bfe679 284 SUPERFAMILY SSF53850 86 281 7.74E-30 T 12-10-2018 PA257_0893 935ee2c19a6ac38216fe3e4cf4bfe679 284 Gene3D G3DSA:3.40.190.10 168 258 4.1E-28 T 12-10-2018 PA257_6278 a9b28ffa75ac2dcc6d12d9fb96153074 110 Gene3D G3DSA:1.10.3730.20 1 110 2.6E-34 T 12-10-2018 PA257_6278 a9b28ffa75ac2dcc6d12d9fb96153074 110 SUPERFAMILY SSF103481 5 106 6.67E-20 T 12-10-2018 PA257_6278 a9b28ffa75ac2dcc6d12d9fb96153074 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 7.3E-25 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 PA257_3781 5761c904e633ea75440f82bc7498b04f 311 Gene3D G3DSA:1.10.10.10 3 92 6.1E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3781 5761c904e633ea75440f82bc7498b04f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.4E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3781 5761c904e633ea75440f82bc7498b04f 311 Pfam PF03466 LysR substrate binding domain 89 295 6.4E-39 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3781 5761c904e633ea75440f82bc7498b04f 311 SUPERFAMILY SSF46785 4 88 2.12E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3781 5761c904e633ea75440f82bc7498b04f 311 Gene3D G3DSA:3.40.190.10 166 267 6.6E-50 T 12-10-2018 PA257_3781 5761c904e633ea75440f82bc7498b04f 311 SUPERFAMILY SSF53850 90 298 3.26E-39 T 12-10-2018 PA257_3781 5761c904e633ea75440f82bc7498b04f 311 Gene3D G3DSA:3.40.190.10 93 293 6.6E-50 T 12-10-2018 PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 Pfam PF00248 Aldo/keto reductase family 12 255 6.9E-45 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 SUPERFAMILY SSF51430 7 262 1.96E-78 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 PIRSF PIRSF000097 2 270 1.4E-59 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 34 51 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 119 136 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 PRINTS PR00069 Aldo-keto reductase signature 30 54 4.4E-42 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 PRINTS PR00069 Aldo-keto reductase signature 86 104 4.4E-42 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 PRINTS PR00069 Aldo-keto reductase signature 154 183 4.4E-42 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 PRINTS PR00069 Aldo-keto reductase signature 119 136 4.4E-42 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 PRINTS PR00069 Aldo-keto reductase signature 191 215 4.4E-42 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_0926 3ed935f0fbd35add759659bbf18771a4 272 Gene3D G3DSA:3.20.20.100 1 272 4.2E-89 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_3055 50884b91d844c92511462fce25c5ec42 337 SUPERFAMILY SSF63380 76 204 4.77E-23 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_3055 50884b91d844c92511462fce25c5ec42 337 SUPERFAMILY SSF54292 1 98 1.97E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_3055 50884b91d844c92511462fce25c5ec42 337 Pfam PF00970 Oxidoreductase FAD-binding domain 109 202 1.4E-16 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PA257_3055 50884b91d844c92511462fce25c5ec42 337 Pfam PF00175 Oxidoreductase NAD-binding domain 212 314 1.9E-22 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 Gene3D G3DSA:3.40.50.80 200 332 1.5E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_3055 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 153 160 5.4E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 236 245 5.4E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 211 230 5.4E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 300 308 5.4E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PA257_3055 50884b91d844c92511462fce25c5ec42 337 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 4.5E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_3055 50884b91d844c92511462fce25c5ec42 337 Gene3D G3DSA:2.40.30.10 101 199 2.0E-23 T 12-10-2018 PA257_3055 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 205 6.4E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 211 230 6.4E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 148 6.4E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 153 160 6.4E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 236 245 6.4E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 6.4E-25 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_3055 50884b91d844c92511462fce25c5ec42 337 Gene3D G3DSA:3.10.20.30 1 100 1.0E-27 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_3055 50884b91d844c92511462fce25c5ec42 337 SUPERFAMILY SSF52343 204 333 3.67E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_2035 3a65ada91a6aed25cc387ef1083d7403 331 SMART SM00382 28 211 1.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2035 3a65ada91a6aed25cc387ef1083d7403 331 Gene3D G3DSA:3.40.50.300 2 265 4.7E-82 T 12-10-2018 PA257_2035 3a65ada91a6aed25cc387ef1083d7403 331 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2035 3a65ada91a6aed25cc387ef1083d7403 331 Pfam PF00005 ABC transporter 20 161 1.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_2035 3a65ada91a6aed25cc387ef1083d7403 331 SUPERFAMILY SSF52540 4 241 4.37E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2035 3a65ada91a6aed25cc387ef1083d7403 331 SUPERFAMILY SSF50331 252 327 9.35E-9 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_2035 3a65ada91a6aed25cc387ef1083d7403 331 Pfam PF08402 TOBE domain 257 327 2.1E-8 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PA257_2298 61f9cec5362c43443ee988624716f3c8 327 Gene3D G3DSA:3.20.20.300 1 327 3.9E-139 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 PA257_2298 61f9cec5362c43443ee988624716f3c8 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 225 242 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 PA257_2298 61f9cec5362c43443ee988624716f3c8 327 SUPERFAMILY SSF51445 1 282 1.68E-81 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_2298 61f9cec5362c43443ee988624716f3c8 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 325 48.526 T 12-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 PA257_2298 61f9cec5362c43443ee988624716f3c8 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 289 1.4E-77 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 313 2.1E-133 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 SUPERFAMILY SSF47323 316 458 1.7E-41 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 SMART SM00840 340 401 7.6E-27 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 457 5.9E-177 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.7E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.7E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.7E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.7E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 Pfam PF09190 DALR domain 340 401 8.1E-23 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 SUPERFAMILY SSF52374 3 312 6.14E-102 T 12-10-2018 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 Gene3D G3DSA:1.20.120.640 306 458 3.6E-50 T 12-10-2018 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.124 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 PA257_3974 2f1e8b0390d8bf5f7e53a5128b048c9b 460 Gene3D G3DSA:3.40.50.620 1 305 7.3E-135 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_4667 9de7f9d3f2653db875f02c759c0bd47b 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 6.0E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4667 9de7f9d3f2653db875f02c759c0bd47b 238 Gene3D G3DSA:3.40.1410.10 82 235 4.5E-35 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_4667 9de7f9d3f2653db875f02c759c0bd47b 238 SUPERFAMILY SSF46785 10 81 8.35E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4667 9de7f9d3f2653db875f02c759c0bd47b 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.1E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4667 9de7f9d3f2653db875f02c759c0bd47b 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.1E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4667 9de7f9d3f2653db875f02c759c0bd47b 238 Pfam PF07702 UTRA domain 92 230 3.3E-37 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_4667 9de7f9d3f2653db875f02c759c0bd47b 238 SMART SM00345 12 71 5.1E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4667 9de7f9d3f2653db875f02c759c0bd47b 238 SUPERFAMILY SSF64288 59 235 1.11E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_4667 9de7f9d3f2653db875f02c759c0bd47b 238 Gene3D G3DSA:1.10.10.10 6 77 1.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4667 9de7f9d3f2653db875f02c759c0bd47b 238 SMART SM00866 92 231 2.2E-30 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_2276 67a33b233ac3d462fe07b4a060e4b399 531 Gene3D G3DSA:3.30.465.40 58 264 1.2E-140 T 12-10-2018 PA257_2276 67a33b233ac3d462fe07b4a060e4b399 531 SUPERFAMILY SSF55103 269 530 1.37E-36 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PA257_2276 67a33b233ac3d462fe07b4a060e4b399 531 SUPERFAMILY SSF56176 56 264 2.62E-42 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_2276 67a33b233ac3d462fe07b4a060e4b399 531 Gene3D G3DSA:3.40.462.40 69 485 1.2E-140 T 12-10-2018 PA257_2276 67a33b233ac3d462fe07b4a060e4b399 531 Pfam PF02913 FAD linked oxidases, C-terminal domain 266 526 3.3E-46 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PA257_2276 67a33b233ac3d462fe07b4a060e4b399 531 Pfam PF01565 FAD binding domain 88 215 6.4E-29 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PA257_5581 dd204d679e773bcdee6de15bfbc05769 225 SMART SM00796 2 202 4.4E-92 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D PA257_5581 dd204d679e773bcdee6de15bfbc05769 225 Gene3D G3DSA:2.40.100.10 89 218 6.3E-53 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_5581 dd204d679e773bcdee6de15bfbc05769 225 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 3 202 2.0E-66 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D PA257_5581 dd204d679e773bcdee6de15bfbc05769 225 SUPERFAMILY SSF50891 91 218 8.34E-42 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_5581 dd204d679e773bcdee6de15bfbc05769 225 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 3.5E-47 T 12-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PA257_5581 dd204d679e773bcdee6de15bfbc05769 225 SUPERFAMILY SSF160467 3 96 1.96E-16 T 12-10-2018 PA257_5581 dd204d679e773bcdee6de15bfbc05769 225 Gene3D G3DSA:3.30.1360.40 2 78 6.7E-15 T 12-10-2018 PA257_0064 cb6e1bc12d904c8da00ecba7150073fc 228 Gene3D G3DSA:3.40.50.10610 67 228 3.1E-5 T 12-10-2018 PA257_0064 cb6e1bc12d904c8da00ecba7150073fc 228 SUPERFAMILY SSF52964 49 146 6.02E-10 T 12-10-2018 PA257_0064 cb6e1bc12d904c8da00ecba7150073fc 228 Pfam PF03783 Curli production assembly/transport component CsgG 48 225 1.2E-30 T 12-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 PA257_3368 0ab713f159fcd2baf4b1cea49a4e434c 296 SUPERFAMILY SSF46689 191 242 6.53E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3368 0ab713f159fcd2baf4b1cea49a4e434c 296 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 179 9.7E-44 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal PA257_3368 0ab713f159fcd2baf4b1cea49a4e434c 296 SMART SM00342 208 291 7.7E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3368 0ab713f159fcd2baf4b1cea49a4e434c 296 SUPERFAMILY SSF46689 244 291 3.67E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3368 0ab713f159fcd2baf4b1cea49a4e434c 296 Gene3D G3DSA:1.10.10.60 189 295 1.3E-25 T 12-10-2018 PA257_3368 0ab713f159fcd2baf4b1cea49a4e434c 296 Pfam PF12833 Helix-turn-helix domain 214 289 8.9E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5162 29f69d924300ae24598f35f8a8912275 293 Gene3D G3DSA:2.60.120.280 48 173 9.4E-11 T 12-10-2018 PA257_5162 29f69d924300ae24598f35f8a8912275 293 SMART SM00342 205 288 6.2E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5162 29f69d924300ae24598f35f8a8912275 293 Pfam PF02311 AraC-like ligand binding domain 44 153 2.5E-20 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_5162 29f69d924300ae24598f35f8a8912275 293 SUPERFAMILY SSF51215 29 174 9.68E-29 T 12-10-2018 IPR037923 Transcription regulator HTH-like PA257_5162 29f69d924300ae24598f35f8a8912275 293 Gene3D G3DSA:1.10.10.60 186 292 1.4E-26 T 12-10-2018 PA257_5162 29f69d924300ae24598f35f8a8912275 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_5162 29f69d924300ae24598f35f8a8912275 293 SUPERFAMILY SSF46689 191 236 1.34E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5162 29f69d924300ae24598f35f8a8912275 293 Pfam PF12833 Helix-turn-helix domain 211 289 1.3E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5162 29f69d924300ae24598f35f8a8912275 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 8.6E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_5162 29f69d924300ae24598f35f8a8912275 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 8.6E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_5162 29f69d924300ae24598f35f8a8912275 293 SUPERFAMILY SSF46689 242 289 4.93E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 Gene3D G3DSA:1.10.730.10 465 587 2.1E-30 T 12-10-2018 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 Pfam PF00750 tRNA synthetases class I (R) 101 457 1.8E-125 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 SMART SM01016 3 91 2.8E-38 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 Pfam PF05746 DALR anticodon binding domain 471 587 1.8E-31 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 SUPERFAMILY SSF55190 1 103 7.85E-24 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 127 138 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 SMART SM00836 471 587 8.8E-36 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 1 587 5.5E-167 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 SUPERFAMILY SSF52374 114 464 3.27E-88 T 12-10-2018 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 Gene3D G3DSA:3.30.1360.70 2 110 1.0E-27 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 90 9.2E-25 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 587 26.626 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 SUPERFAMILY SSF47323 465 587 3.53E-33 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 Gene3D G3DSA:3.40.50.620 113 464 4.1E-107 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 158 171 5.7E-26 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 150 5.7E-26 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 134 5.7E-26 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_6342 2eb9b88e86d5827421cebf1d94398a50 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 5.7E-26 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PA257_4630 5301ac93e0f9bfd20c8e02343fabcd22 55 TIGRFAM TIGR02973 nitrate_rd_NapE: periplasmic nitrate reductase, NapE protein 11 52 1.2E-23 T 12-10-2018 IPR004448 Nitrate reductas, NapE, periplasmic PA257_4630 5301ac93e0f9bfd20c8e02343fabcd22 55 Pfam PF06796 Periplasmic nitrate reductase protein NapE 2 53 4.8E-25 T 12-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE PA257_4496 c04ba6beca1c2adb1e8b6e393a3fd17e 327 Gene3D G3DSA:2.60.120.1440 114 249 1.1E-23 T 12-10-2018 PA257_4496 c04ba6beca1c2adb1e8b6e393a3fd17e 327 Pfam PF16220 Domain of unknown function (DUF4880) 22 63 9.2E-12 T 12-10-2018 IPR032623 FecR, N-terminal PA257_4496 c04ba6beca1c2adb1e8b6e393a3fd17e 327 Pfam PF04773 FecR protein 119 209 6.9E-19 T 12-10-2018 IPR006860 FecR protein PA257_4496 c04ba6beca1c2adb1e8b6e393a3fd17e 327 Pfam PF16344 Domain of unknown function (DUF4974) 227 305 9.8E-8 T 12-10-2018 IPR032508 Protein FecR, C-terminal PA257_4496 c04ba6beca1c2adb1e8b6e393a3fd17e 327 PIRSF PIRSF018266 12 327 2.4E-90 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_5956 31be409f61215d3456c3847c96991c27 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 8.0E-40 T 12-10-2018 PA257_5956 31be409f61215d3456c3847c96991c27 89 Gene3D G3DSA:1.10.287.10 2 89 2.7E-34 T 12-10-2018 PA257_5956 31be409f61215d3456c3847c96991c27 89 SUPERFAMILY SSF47060 3 89 2.68E-34 T 12-10-2018 IPR009068 S15/NS1, RNA-binding PA257_5956 31be409f61215d3456c3847c96991c27 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.2E-37 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5956 31be409f61215d3456c3847c96991c27 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.97 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5956 31be409f61215d3456c3847c96991c27 89 Pfam PF00312 Ribosomal protein S15 8 88 5.5E-36 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5956 31be409f61215d3456c3847c96991c27 89 SMART SM01387 8 88 5.2E-50 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5956 31be409f61215d3456c3847c96991c27 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5456 5a7eccf16d5ee40b0cad406df132eb3d 333 Pfam PF04338 Protein of unknown function, DUF481 126 333 2.2E-47 T 12-10-2018 IPR007433 Protein of unknown function DUF481 PA257_6772 86aad7dca18f127a73b10c502bbf68fd 279 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 5 271 3.2E-126 T 12-10-2018 IPR017784 ABC transporter, choline, permease protein PA257_6772 86aad7dca18f127a73b10c502bbf68fd 279 Gene3D G3DSA:1.10.3720.10 87 273 6.3E-34 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6772 86aad7dca18f127a73b10c502bbf68fd 279 SUPERFAMILY SSF161098 87 271 5.89E-39 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6772 86aad7dca18f127a73b10c502bbf68fd 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 267 9.9E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_1495 2fcd0e7b05f48bff33d22b516b99f758 571 Gene3D G3DSA:3.10.310.30 323 451 2.6E-32 T 12-10-2018 PA257_1495 2fcd0e7b05f48bff33d22b516b99f758 571 Pfam PF02272 DHHA1 domain 318 445 4.6E-29 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 PA257_1495 2fcd0e7b05f48bff33d22b516b99f758 571 Gene3D G3DSA:3.90.1640.30 44 322 2.4E-85 T 12-10-2018 PA257_1495 2fcd0e7b05f48bff33d22b516b99f758 571 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 566 7.3E-149 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 PA257_1495 2fcd0e7b05f48bff33d22b516b99f758 571 Pfam PF01368 DHH family 69 197 5.6E-8 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_1495 2fcd0e7b05f48bff33d22b516b99f758 571 SUPERFAMILY SSF64182 44 459 1.29E-118 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily PA257_5317 aa3d86ec1f388b198895b8669fe4445b 469 Gene3D G3DSA:3.40.50.300 211 469 1.7E-110 T 12-10-2018 PA257_5317 aa3d86ec1f388b198895b8669fe4445b 469 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 3 466 3.7E-216 T 12-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 PA257_5317 aa3d86ec1f388b198895b8669fe4445b 469 SUPERFAMILY SSF160246 3 64 8.11E-7 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily PA257_5317 aa3d86ec1f388b198895b8669fe4445b 469 SUPERFAMILY SSF52540 94 466 3.17E-101 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5317 aa3d86ec1f388b198895b8669fe4445b 469 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 305 319 - T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_5317 aa3d86ec1f388b198895b8669fe4445b 469 Pfam PF00437 Type II/IV secretion system protein 114 377 1.5E-85 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_5317 aa3d86ec1f388b198895b8669fe4445b 469 SMART SM00382 238 359 7.2E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5317 aa3d86ec1f388b198895b8669fe4445b 469 Gene3D G3DSA:3.30.450.90 75 210 5.1E-50 T 12-10-2018 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 420 435 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 619 639 1.6E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 602 619 1.6E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 Pfam PF01590 GAF domain 73 194 2.5E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 SUPERFAMILY SSF52540 346 571 2.73E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 Gene3D G3DSA:3.30.450.40 21 209 1.7E-47 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 Gene3D G3DSA:3.30.450.20 231 288 4.2E-6 T 12-10-2018 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 SMART SM00382 353 496 7.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 SUPERFAMILY SSF46689 542 638 9.86E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 357 370 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 Gene3D G3DSA:1.10.8.60 505 577 6.7E-12 T 12-10-2018 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 Gene3D G3DSA:3.40.50.300 332 504 8.6E-55 T 12-10-2018 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 SUPERFAMILY SSF55781 68 199 4.12E-9 T 12-10-2018 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 Pfam PF02954 Bacterial regulatory protein, Fis family 595 636 6.5E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 Pfam PF00158 Sigma-54 interaction domain 340 498 1.4E-59 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 Gene3D G3DSA:1.10.10.60 593 640 1.3E-12 T 12-10-2018 PA257_1131 778304d7eec4c77a2b615ff68f1be435 643 SUPERFAMILY SSF55785 235 313 1.44E-8 T 12-10-2018 IPR035965 PAS domain superfamily PA257_6171 8dbd58077ccb664652e3c36e743b7454 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 6 201 5.4E-106 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PA257_6171 8dbd58077ccb664652e3c36e743b7454 204 PIRSF PIRSF005624 2 203 1.6E-46 T 12-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 PA257_6171 8dbd58077ccb664652e3c36e743b7454 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 48.063 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PA257_6171 8dbd58077ccb664652e3c36e743b7454 204 SMART SM00382 4 183 0.0019 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6171 8dbd58077ccb664652e3c36e743b7454 204 SUPERFAMILY SSF52540 3 197 1.79E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6171 8dbd58077ccb664652e3c36e743b7454 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 2.8E-35 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PA257_6171 8dbd58077ccb664652e3c36e743b7454 204 Gene3D G3DSA:3.40.50.300 6 202 1.1E-49 T 12-10-2018 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 14 233 1.3E-82 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 Gene3D G3DSA:1.20.140.160 85 235 2.5E-43 T 12-10-2018 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 233 3.2E-34 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 41 54 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 Pfam PF04542 Sigma-70 region 2 14 86 7.6E-20 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 1 236 67.681 T 12-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 PRINTS PR00046 Major sigma-70 factor signature 41 54 2.1E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 PRINTS PR00046 Major sigma-70 factor signature 218 229 2.1E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 PRINTS PR00046 Major sigma-70 factor signature 186 198 2.1E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 PRINTS PR00046 Major sigma-70 factor signature 203 218 2.1E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 Gene3D G3DSA:1.10.1740.10 1 83 1.1E-31 T 12-10-2018 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 SUPERFAMILY SSF88659 155 236 1.35E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 Pfam PF04545 Sigma-70, region 4 182 231 5.8E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 Pfam PF04539 Sigma-70 region 3 95 155 9.6E-10 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 PIRSF PIRSF000770 1 238 2.0E-35 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 SUPERFAMILY SSF88659 88 155 9.16E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_4338 2f04aea07767327a6b80d07e2de52e32 239 SUPERFAMILY SSF88946 3 86 5.1E-26 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_2885 c4db9f81fcfd1f05274f0299be2f8677 117 Pfam PF00816 H-NS histone family 13 105 5.9E-6 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 PA257_4949 02e0b09d7dc26721f386b9129f22df9b 338 Gene3D G3DSA:2.40.40.20 274 338 8.2E-38 T 12-10-2018 PA257_4949 02e0b09d7dc26721f386b9129f22df9b 338 TIGRFAM TIGR03245 arg_AOST_alph: arginine/ornithine succinyltransferase, alpha subunit 3 338 7.1E-165 T 12-10-2018 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit KEGG: 00330+2.3.1.109 PA257_4949 02e0b09d7dc26721f386b9129f22df9b 338 SUPERFAMILY SSF55729 1 337 1.85E-120 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_4949 02e0b09d7dc26721f386b9129f22df9b 338 Gene3D G3DSA:3.40.630.30 1 273 1.2E-113 T 12-10-2018 PA257_4949 02e0b09d7dc26721f386b9129f22df9b 338 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 1.0E-132 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 PA257_4949 02e0b09d7dc26721f386b9129f22df9b 338 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 8.0E-127 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 PA257_4368 9c7c041576208dff15fa80877be54dec 546 SMART SM00382 39 224 2.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4368 9c7c041576208dff15fa80877be54dec 546 SMART SM00382 373 540 2.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4368 9c7c041576208dff15fa80877be54dec 546 SUPERFAMILY SSF52540 13 239 7.96E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4368 9c7c041576208dff15fa80877be54dec 546 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4368 9c7c041576208dff15fa80877be54dec 546 Gene3D G3DSA:3.40.50.300 308 537 4.1E-35 T 12-10-2018 PA257_4368 9c7c041576208dff15fa80877be54dec 546 Gene3D G3DSA:3.40.50.300 2 286 4.3E-40 T 12-10-2018 PA257_4368 9c7c041576208dff15fa80877be54dec 546 Pfam PF00005 ABC transporter 365 494 2.5E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4368 9c7c041576208dff15fa80877be54dec 546 Pfam PF00005 ABC transporter 41 180 3.1E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4368 9c7c041576208dff15fa80877be54dec 546 SUPERFAMILY SSF52540 364 528 7.39E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 SMART SM01086 317 412 8.9E-35 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 412 2.3E-207 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 SMART SM00382 112 333 2.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 SUPERFAMILY SSF52540 65 403 3.57E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 311 2.6E-50 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 2.3E-16 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 SMART SM00994 13 52 2.5E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 SUPERFAMILY SSF57716 14 49 1.14E-11 T 12-10-2018 PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 Gene3D G3DSA:3.40.50.300 58 315 7.8E-110 T 12-10-2018 PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 3.9E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.844 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 Gene3D G3DSA:1.10.8.60 316 423 8.5E-42 T 12-10-2018 PA257_3958 8f7bec34ebbfb44721683e2d983a6e3b 426 Gene3D G3DSA:3.30.50.30 3 53 5.6E-26 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily PA257_2493 32b3de056885833389d04b6422312142 772 SMART SM00387 402 513 8.2E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2493 32b3de056885833389d04b6422312142 772 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 356 1.0E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2493 32b3de056885833389d04b6422312142 772 SMART SM00448 649 762 4.1E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2493 32b3de056885833389d04b6422312142 772 Gene3D G3DSA:1.10.287.130 256 354 9.7E-25 T 12-10-2018 PA257_2493 32b3de056885833389d04b6422312142 772 SUPERFAMILY SSF47384 276 357 1.02E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2493 32b3de056885833389d04b6422312142 772 Gene3D G3DSA:3.30.565.10 355 513 1.2E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2493 32b3de056885833389d04b6422312142 772 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 512 1.2E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2493 32b3de056885833389d04b6422312142 772 SUPERFAMILY SSF52172 648 767 3.98E-42 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2493 32b3de056885833389d04b6422312142 772 Gene3D G3DSA:3.40.50.12740 648 768 2.4E-44 T 12-10-2018 PA257_2493 32b3de056885833389d04b6422312142 772 Pfam PF00072 Response regulator receiver domain 651 762 1.7E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2493 32b3de056885833389d04b6422312142 772 SUPERFAMILY SSF55874 345 514 2.36E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2493 32b3de056885833389d04b6422312142 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 510 1.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2493 32b3de056885833389d04b6422312142 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 1.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2493 32b3de056885833389d04b6422312142 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 1.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2493 32b3de056885833389d04b6422312142 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 1.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2493 32b3de056885833389d04b6422312142 772 SMART SM00388 291 356 2.2E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2493 32b3de056885833389d04b6422312142 772 SUPERFAMILY SSF52172 528 631 1.44E-6 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1164 38e66d69574464a05d83c92935658f5b 208 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 6 162 23.167 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PA257_1164 38e66d69574464a05d83c92935658f5b 208 Pfam PF04390 Lipopolysaccharide-assembly 36 156 1.3E-9 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PA257_1164 38e66d69574464a05d83c92935658f5b 208 Gene3D G3DSA:3.30.160.150 19 184 4.3E-61 T 12-10-2018 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 Pfam PF10415 Fumarase C C-terminus 406 458 1.5E-26 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 Gene3D G3DSA:1.10.275.10 3 136 3.7E-60 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal PA257_4995 7b3d344d3487058f798a87450317e1a8 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 458 3.4E-221 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 Gene3D G3DSA:1.20.200.10 137 405 1.3E-111 T 12-10-2018 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 1.5E-6 T 12-10-2018 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 1.5E-6 T 12-10-2018 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00145 Argininosuccinate lyase family signature 131 153 1.5E-6 T 12-10-2018 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 1.9E-32 T 12-10-2018 IPR000362 Fumarate lyase family PA257_4995 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 1.9E-32 T 12-10-2018 IPR000362 Fumarate lyase family PA257_4995 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 1.9E-32 T 12-10-2018 IPR000362 Fumarate lyase family PA257_4995 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 1.9E-32 T 12-10-2018 IPR000362 Fumarate lyase family PA257_4995 7b3d344d3487058f798a87450317e1a8 464 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 SUPERFAMILY SSF48557 3 459 2.67E-155 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 2 460 89.637 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 Gene3D G3DSA:1.10.40.30 406 462 3.9E-30 T 12-10-2018 PA257_4995 7b3d344d3487058f798a87450317e1a8 464 Pfam PF00206 Lyase 10 340 5.0E-106 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 SUPERFAMILY SSF50621 245 386 1.51E-30 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 Gene3D G3DSA:3.20.20.10 33 273 3.9E-96 T 12-10-2018 IPR029066 PLP-binding barrel PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 Gene3D G3DSA:2.40.37.10 22 380 3.9E-96 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 54 72 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 271 5.0E-55 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 52 79 1.1E-18 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 96 120 1.1E-18 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 126 148 1.1E-18 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 26 50 1.1E-18 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 329 339 1.1E-18 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 272 365 9.4E-15 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 190 3.8E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 74 86 3.8E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 54 72 3.8E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 261 280 3.8E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_5590 d2296bf5c2e39fae8ca731c0a1abb27a 387 SUPERFAMILY SSF51419 25 273 4.86E-66 T 12-10-2018 IPR029066 PLP-binding barrel PA257_5570 dec5b9dd3d0a03684f8630cc3960034c 533 Gene3D G3DSA:3.40.190.10 208 520 3.3E-167 T 12-10-2018 PA257_5570 dec5b9dd3d0a03684f8630cc3960034c 533 SUPERFAMILY SSF53850 28 528 1.32E-148 T 12-10-2018 PA257_5570 dec5b9dd3d0a03684f8630cc3960034c 533 Gene3D G3DSA:3.10.105.10 290 507 3.3E-167 T 12-10-2018 PA257_5570 dec5b9dd3d0a03684f8630cc3960034c 533 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site PA257_5570 dec5b9dd3d0a03684f8630cc3960034c 533 PIRSF PIRSF002741 19 529 3.1E-118 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PA257_5570 dec5b9dd3d0a03684f8630cc3960034c 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 452 1.4E-99 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain PA257_5570 dec5b9dd3d0a03684f8630cc3960034c 533 Gene3D G3DSA:3.90.76.10 41 207 3.3E-167 T 12-10-2018 PA257_5365 31e6fba7a27dca3a9f1d3675c63f5601 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 335 353 8.9E-11 T 12-10-2018 IPR001775 GspD/PilQ family PA257_5365 31e6fba7a27dca3a9f1d3675c63f5601 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 358 372 8.9E-11 T 12-10-2018 IPR001775 GspD/PilQ family PA257_5365 31e6fba7a27dca3a9f1d3675c63f5601 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 205 229 8.9E-11 T 12-10-2018 IPR001775 GspD/PilQ family PA257_5365 31e6fba7a27dca3a9f1d3675c63f5601 416 Pfam PF00263 Bacterial type II and III secretion system protein 209 371 1.9E-43 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 PA257_5365 31e6fba7a27dca3a9f1d3675c63f5601 416 Pfam PF13629 Pilus formation protein N terminal region 39 108 1.8E-19 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 486 2.4E-174 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 488 82.424 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 188 1.5E-54 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 6.5E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 6.5E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 6.5E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 6.5E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 6.5E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 SUPERFAMILY SSF55347 178 487 3.6E-116 T 12-10-2018 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 Gene3D G3DSA:3.30.360.10 178 475 1.5E-170 T 12-10-2018 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 PIRSF PIRSF000110 2 488 2.7E-172 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 190 486 3.8E-119 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 Gene3D G3DSA:3.40.50.720 12 436 1.5E-170 T 12-10-2018 PA257_6837 c86dd2e5fe49465f357b6d53c86e23c1 488 SUPERFAMILY SSF51735 5 191 4.13E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3748 8e34a874f00a42364c9881ab5fa0c121 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 15 379 5.1E-115 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 PA257_3748 8e34a874f00a42364c9881ab5fa0c121 387 Gene3D G3DSA:3.40.50.1970 5 187 7.8E-56 T 12-10-2018 PA257_3748 8e34a874f00a42364c9881ab5fa0c121 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PA257_3748 8e34a874f00a42364c9881ab5fa0c121 387 SUPERFAMILY SSF56796 11 384 2.75E-118 T 12-10-2018 PA257_3748 8e34a874f00a42364c9881ab5fa0c121 387 Gene3D G3DSA:1.20.1090.10 191 387 1.0E-58 T 12-10-2018 PA257_5967 a96de8b9b5e73cddc1b51a288726681f 259 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 254 3.5E-100 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 PA257_5967 a96de8b9b5e73cddc1b51a288726681f 259 SUPERFAMILY SSF51717 1 255 1.57E-101 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5967 a96de8b9b5e73cddc1b51a288726681f 259 Pfam PF00809 Pterin binding enzyme 1 240 4.4E-86 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5967 a96de8b9b5e73cddc1b51a288726681f 259 Gene3D G3DSA:3.20.20.20 1 259 1.6E-107 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5967 a96de8b9b5e73cddc1b51a288726681f 259 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_6355 6f58d3a8a7dfc1f28e50c23d87a2236a 256 Gene3D G3DSA:3.40.50.150 36 256 1.2E-76 T 12-10-2018 PA257_6355 6f58d3a8a7dfc1f28e50c23d87a2236a 256 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 41 56 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 PA257_6355 6f58d3a8a7dfc1f28e50c23d87a2236a 256 SUPERFAMILY SSF53335 18 253 3.1E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6355 6f58d3a8a7dfc1f28e50c23d87a2236a 256 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 21 255 38.966 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PA257_6355 6f58d3a8a7dfc1f28e50c23d87a2236a 256 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 30 255 2.3E-84 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PA257_6355 6f58d3a8a7dfc1f28e50c23d87a2236a 256 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 163 177 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 PA257_6355 6f58d3a8a7dfc1f28e50c23d87a2236a 256 Pfam PF01209 ubiE/COQ5 methyltransferase family 25 255 7.3E-99 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PA257_1877 65a10c61680cfabb33666718e97219fa 178 SUPERFAMILY SSF160387 66 172 3.66E-32 T 12-10-2018 PA257_1877 65a10c61680cfabb33666718e97219fa 178 Pfam PF05573 NosL 19 163 3.3E-51 T 12-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL PA257_1877 65a10c61680cfabb33666718e97219fa 178 Gene3D G3DSA:3.30.70.2060 66 117 6.3E-7 T 12-10-2018 PA257_1877 65a10c61680cfabb33666718e97219fa 178 Gene3D G3DSA:3.30.70.2050 118 175 3.8E-10 T 12-10-2018 PA257_2043 722b2a8afd8e377c183d9fb990fba9d8 211 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 53 67 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2043 722b2a8afd8e377c183d9fb990fba9d8 211 Gene3D G3DSA:3.30.2350.10 3 210 1.6E-68 T 12-10-2018 PA257_2043 722b2a8afd8e377c183d9fb990fba9d8 211 Pfam PF00849 RNA pseudouridylate synthase 15 161 4.4E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2043 722b2a8afd8e377c183d9fb990fba9d8 211 SUPERFAMILY SSF55120 5 210 1.01E-61 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_0732 9e1eac24594e5b55056bc896e459d8fe 410 PIRSF PIRSF000813 1 408 1.6E-201 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PA257_0732 9e1eac24594e5b55056bc896e459d8fe 410 SUPERFAMILY SSF81301 1 119 1.42E-29 T 12-10-2018 PA257_0732 9e1eac24594e5b55056bc896e459d8fe 410 Pfam PF01743 Poly A polymerase head domain 4 122 3.8E-18 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PA257_0732 9e1eac24594e5b55056bc896e459d8fe 410 Pfam PF01966 HD domain 231 320 7.5E-8 T 12-10-2018 IPR006674 HD domain PA257_0732 9e1eac24594e5b55056bc896e459d8fe 410 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 41.308 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PA257_0732 9e1eac24594e5b55056bc896e459d8fe 410 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 55.26 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PA257_0732 9e1eac24594e5b55056bc896e459d8fe 410 Gene3D G3DSA:1.10.3090.10 122 408 3.0E-43 T 12-10-2018 PA257_0732 9e1eac24594e5b55056bc896e459d8fe 410 SUPERFAMILY SSF81891 120 401 7.06E-52 T 12-10-2018 PA257_0732 9e1eac24594e5b55056bc896e459d8fe 410 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 9.3E-13 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PA257_0732 9e1eac24594e5b55056bc896e459d8fe 410 Gene3D G3DSA:3.30.460.10 1 121 4.0E-30 T 12-10-2018 PA257_4669 da8bdb32621162081d376489cc62a711 278 Gene3D G3DSA:2.60.120.10 40 165 2.9E-114 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4669 da8bdb32621162081d376489cc62a711 278 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 6 272 6.8E-117 T 12-10-2018 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PA257_4669 da8bdb32621162081d376489cc62a711 278 Pfam PF07883 Cupin domain 195 252 1.5E-7 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_4669 da8bdb32621162081d376489cc62a711 278 Pfam PF07883 Cupin domain 72 141 9.4E-13 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_4669 da8bdb32621162081d376489cc62a711 278 Gene3D G3DSA:2.60.120.10 27 268 2.9E-114 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4669 da8bdb32621162081d376489cc62a711 278 SUPERFAMILY SSF51182 10 272 7.89E-86 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_0476 d39a6549b0853cc845c29e6a92d7ff73 452 SUPERFAMILY SSF54631 334 425 1.31E-13 T 12-10-2018 PA257_0476 d39a6549b0853cc845c29e6a92d7ff73 452 Gene3D G3DSA:3.10.580.10 331 443 2.6E-14 T 12-10-2018 PA257_0476 d39a6549b0853cc845c29e6a92d7ff73 452 Pfam PF00571 CBS domain 344 387 9.9E-10 T 12-10-2018 IPR000644 CBS domain PA257_0476 d39a6549b0853cc845c29e6a92d7ff73 452 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 303 7.4E-65 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_0476 d39a6549b0853cc845c29e6a92d7ff73 452 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PA257_0476 d39a6549b0853cc845c29e6a92d7ff73 452 SMART SM00116 344 391 1.8E-7 T 12-10-2018 IPR000644 CBS domain PA257_0476 d39a6549b0853cc845c29e6a92d7ff73 452 Gene3D G3DSA:3.40.50.1100 42 155 1.2E-109 T 12-10-2018 PA257_0476 d39a6549b0853cc845c29e6a92d7ff73 452 SUPERFAMILY SSF53686 6 321 1.96E-92 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_0476 d39a6549b0853cc845c29e6a92d7ff73 452 Gene3D G3DSA:3.40.50.1100 11 311 1.2E-109 T 12-10-2018 PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 Gene3D G3DSA:2.40.50.230 357 458 2.8E-44 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 Gene3D G3DSA:3.30.1920.30 220 279 1.0E-88 T 12-10-2018 PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 4.0E-205 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 SUPERFAMILY SSF69349 444 626 1.65E-37 T 12-10-2018 PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 SUPERFAMILY SSF69279 184 366 4.08E-45 T 12-10-2018 PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 Gene3D G3DSA:2.30.110.50 20 323 1.0E-88 T 12-10-2018 PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 SUPERFAMILY SSF69279 10 184 4.65E-57 T 12-10-2018 PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 Pfam PF05954 Phage late control gene D protein (GPD) 29 322 2.1E-79 T 12-10-2018 PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 SUPERFAMILY SSF69255 366 454 1.31E-34 T 12-10-2018 PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 4.0E-126 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_4121 c77b7104759a0366dafb2dd72b0cd33d 678 Gene3D G3DSA:3.55.50.10 95 188 1.0E-88 T 12-10-2018 PA257_1804 6246d9b9ca2cc8c5c69698a1ed332d09 441 Gene3D G3DSA:3.40.50.300 1 216 5.6E-70 T 12-10-2018 PA257_1804 6246d9b9ca2cc8c5c69698a1ed332d09 441 SMART SM00490 257 338 1.8E-31 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1804 6246d9b9ca2cc8c5c69698a1ed332d09 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PA257_1804 6246d9b9ca2cc8c5c69698a1ed332d09 441 SMART SM00487 19 220 3.4E-54 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_1804 6246d9b9ca2cc8c5c69698a1ed332d09 441 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.3E-28 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1804 6246d9b9ca2cc8c5c69698a1ed332d09 441 SUPERFAMILY SSF52540 73 355 5.02E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1804 6246d9b9ca2cc8c5c69698a1ed332d09 441 Pfam PF00270 DEAD/DEAH box helicase 24 187 1.9E-46 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_1804 6246d9b9ca2cc8c5c69698a1ed332d09 441 Gene3D G3DSA:3.40.50.300 217 415 1.1E-49 T 12-10-2018 PA257_0634 6d4ff46486a4371a055a84aad63ee587 458 SUPERFAMILY SSF56059 86 351 4.07E-68 T 12-10-2018 PA257_0634 6d4ff46486a4371a055a84aad63ee587 458 SUPERFAMILY SSF51246 334 449 3.56E-39 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PA257_0634 6d4ff46486a4371a055a84aad63ee587 458 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 1.3E-41 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_0634 6d4ff46486a4371a055a84aad63ee587 458 SMART SM00878 339 445 3.7E-59 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_0634 6d4ff46486a4371a055a84aad63ee587 458 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 325 1.3E-73 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_0634 6d4ff46486a4371a055a84aad63ee587 458 Pfam PF02785 Biotin carboxylase C-terminal domain 339 445 1.8E-38 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_0634 6d4ff46486a4371a055a84aad63ee587 458 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_0634 6d4ff46486a4371a055a84aad63ee587 458 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_0634 6d4ff46486a4371a055a84aad63ee587 458 SUPERFAMILY SSF52440 3 116 6.83E-44 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_0634 6d4ff46486a4371a055a84aad63ee587 458 Gene3D G3DSA:3.30.470.130 1 450 2.6E-187 T 12-10-2018 PA257_6293 f998d5cd7448d51fa00b4bbe7af16412 585 Pfam PF02543 Carbamoyltransferase N-terminus 5 354 2.7E-57 T 12-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 PA257_6293 f998d5cd7448d51fa00b4bbe7af16412 585 Gene3D G3DSA:3.30.420.350 133 348 1.6E-83 T 12-10-2018 PA257_6293 f998d5cd7448d51fa00b4bbe7af16412 585 Pfam PF16861 Carbamoyltransferase C-terminus 408 575 1.9E-61 T 12-10-2018 IPR031730 Carbamoyltransferase, C-terminal PA257_6293 f998d5cd7448d51fa00b4bbe7af16412 585 Gene3D G3DSA:3.90.870.20 368 574 3.7E-72 T 12-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily PA257_6293 f998d5cd7448d51fa00b4bbe7af16412 585 SUPERFAMILY SSF53067 22 359 8.42E-12 T 12-10-2018 PA257_6293 f998d5cd7448d51fa00b4bbe7af16412 585 Gene3D G3DSA:3.30.420.40 14 355 1.6E-83 T 12-10-2018 PA257_0264 84f34782e1485126e16924cf7275147a 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 120 4.9E-20 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PA257_0264 84f34782e1485126e16924cf7275147a 347 Gene3D G3DSA:3.30.360.10 130 343 6.3E-45 T 12-10-2018 PA257_0264 84f34782e1485126e16924cf7275147a 347 SUPERFAMILY SSF55347 124 273 2.94E-29 T 12-10-2018 PA257_0264 84f34782e1485126e16924cf7275147a 347 SUPERFAMILY SSF51735 3 151 4.54E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0264 84f34782e1485126e16924cf7275147a 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 224 2.4E-11 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PA257_0264 84f34782e1485126e16924cf7275147a 347 Gene3D G3DSA:3.40.50.720 3 129 1.5E-32 T 12-10-2018 PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 122 132 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 306 316 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 Pfam PF12951 Passenger-associated-transport-repeat 456 485 5.8E-8 T 12-10-2018 IPR013425 Autotransporter-associated beta strand repeat PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 Pfam PF03797 Autotransporter beta-domain 723 975 1.7E-56 T 12-10-2018 IPR005546 Autotransporter beta-domain PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 Gene3D G3DSA:3.40.50.200 29 369 1.3E-60 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 SUPERFAMILY SSF52743 49 369 5.89E-60 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 PRINTS PR00723 Subtilisin serine protease family (S8) signature 118 131 9.2E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 PRINTS PR00723 Subtilisin serine protease family (S8) signature 305 321 9.2E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 PRINTS PR00723 Subtilisin serine protease family (S8) signature 70 89 9.2E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 SUPERFAMILY SSF103515 681 995 4.18E-67 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 521 995 2.4E-50 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 Gene3D G3DSA:2.40.128.130 673 995 3.5E-69 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 Pfam PF00082 Subtilase family 70 359 3.9E-38 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 SMART SM00869 719 985 3.5E-53 T 12-10-2018 IPR005546 Autotransporter beta-domain PA257_1748 602792914e803507fc6fc4854fdcbb7f 995 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 455 485 8.6E-11 T 12-10-2018 IPR013425 Autotransporter-associated beta strand repeat PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 SUPERFAMILY SSF88946 115 450 7.72E-105 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.220.120 4 66 3.9E-29 T 12-10-2018 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 4.7E-13 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 379 604 1.2E-37 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 379 615 2.8E-122 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04545 Sigma-70, region 4 551 604 1.0E-18 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04542 Sigma-70 region 2 383 452 1.7E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 576 602 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04539 Sigma-70 region 3 462 538 7.3E-30 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 SUPERFAMILY SSF88659 513 615 9.16E-27 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 616 46.887 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 SUPERFAMILY SSF88659 456 529 1.0E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04546 Sigma-70, non-essential region 139 352 3.1E-65 T 12-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF03979 Sigma-70 factor, region 1.1 6 83 6.6E-30 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.10.10 533 617 1.8E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 576 591 6.5E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 591 602 6.5E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 407 420 6.5E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 431 439 6.5E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 555 567 6.5E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.601.10 113 452 1.4E-137 T 12-10-2018 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 407 420 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_0723 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.10.10 456 532 1.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4773 491e8bb5687f37d3a05d4ee99b70d42b 215 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 215 40.397 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_4773 491e8bb5687f37d3a05d4ee99b70d42b 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 175 215 2.2E-19 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_4773 491e8bb5687f37d3a05d4ee99b70d42b 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 185 198 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_4773 491e8bb5687f37d3a05d4ee99b70d42b 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 44 122 3.5E-29 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_4773 491e8bb5687f37d3a05d4ee99b70d42b 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 215 4.1E-90 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_4773 491e8bb5687f37d3a05d4ee99b70d42b 215 SUPERFAMILY SSF50475 8 215 2.43E-71 T 12-10-2018 PA257_4773 491e8bb5687f37d3a05d4ee99b70d42b 215 PIRSF PIRSF000190 1 215 7.1E-83 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_4773 491e8bb5687f37d3a05d4ee99b70d42b 215 Gene3D G3DSA:2.30.110.10 2 215 2.8E-87 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PA257_6844 bad715f9e391bc6365745ba9f254e358 497 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 463 2.5E-40 T 12-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PA257_6844 bad715f9e391bc6365745ba9f254e358 497 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 13 494 9.5E-231 T 12-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 PA257_6844 bad715f9e391bc6365745ba9f254e358 497 SUPERFAMILY SSF100950 3 222 3.84E-76 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_6844 bad715f9e391bc6365745ba9f254e358 497 Gene3D G3DSA:3.40.1080.20 336 477 2.4E-37 T 12-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily PA257_6844 bad715f9e391bc6365745ba9f254e358 497 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 13 215 1.3E-31 T 12-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PA257_6844 bad715f9e391bc6365745ba9f254e358 497 Gene3D G3DSA:3.40.1080.10 13 196 4.1E-18 T 12-10-2018 PA257_6844 bad715f9e391bc6365745ba9f254e358 497 SUPERFAMILY SSF100950 225 494 2.76E-85 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_2547 fbe4ca40549396f07d5e5b368eb95d47 322 Gene3D G3DSA:1.20.58.340 265 322 5.1E-21 T 12-10-2018 PA257_2547 fbe4ca40549396f07d5e5b368eb95d47 322 SUPERFAMILY SSF144083 258 319 5.75E-18 T 12-10-2018 PA257_2547 fbe4ca40549396f07d5e5b368eb95d47 322 SUPERFAMILY SSF143865 3 248 2.35E-57 T 12-10-2018 PA257_2547 fbe4ca40549396f07d5e5b368eb95d47 322 Gene3D G3DSA:3.30.460.20 2 131 1.7E-20 T 12-10-2018 PA257_2547 fbe4ca40549396f07d5e5b368eb95d47 322 Pfam PF01544 CorA-like Mg2+ transporter protein 32 318 2.0E-53 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PA257_2547 fbe4ca40549396f07d5e5b368eb95d47 322 Gene3D G3DSA:1.20.58.340 132 243 3.5E-28 T 12-10-2018 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 PIRSF PIRSF000726 1 62 9.5E-24 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 PIRSF PIRSF000726 57 411 4.0E-153 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 404 3.7E-131 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 SUPERFAMILY SSF53633 4 241 1.31E-75 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 SUPERFAMILY SSF55021 332 405 4.37E-25 T 12-10-2018 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 403 1.8E-117 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 Gene3D G3DSA:3.30.70.260 262 339 2.5E-58 T 12-10-2018 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 Gene3D G3DSA:3.30.70.260 255 404 2.5E-58 T 12-10-2018 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 Pfam PF13840 ACT domain 339 399 1.8E-15 T 12-10-2018 IPR027795 CASTOR, ACT domain PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 SUPERFAMILY SSF55021 249 327 1.4E-17 T 12-10-2018 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 Pfam PF00696 Amino acid kinase family 3 229 5.7E-49 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 Pfam PF01842 ACT domain 268 325 2.9E-10 T 12-10-2018 IPR002912 ACT domain PA257_4941 e938cfecf68233c7f3f8b42446c07b92 412 Gene3D G3DSA:3.40.1160.10 1 254 1.3E-91 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_5125 ab5e6d0f9613296876dfde5fa4f9f25b 506 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 7.1E-124 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 PA257_5125 ab5e6d0f9613296876dfde5fa4f9f25b 506 Gene3D G3DSA:1.20.1730.10 21 501 2.1E-92 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily PA257_5125 ab5e6d0f9613296876dfde5fa4f9f25b 506 Pfam PF00474 Sodium:solute symporter family 35 437 1.0E-138 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 PA257_5125 ab5e6d0f9613296876dfde5fa4f9f25b 506 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site PA257_5125 ab5e6d0f9613296876dfde5fa4f9f25b 506 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site PA257_5125 ab5e6d0f9613296876dfde5fa4f9f25b 506 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 491 7.3E-228 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 PA257_2589 079b42ed1f87aefba89b146ca8bc13ff 144 Pfam PF09278 MerR, DNA binding 51 113 1.9E-18 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding PA257_2589 079b42ed1f87aefba89b146ca8bc13ff 144 Gene3D G3DSA:1.10.1660.10 1 130 2.6E-32 T 12-10-2018 PA257_2589 079b42ed1f87aefba89b146ca8bc13ff 144 Pfam PF00376 MerR family regulatory protein 9 46 9.5E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2589 079b42ed1f87aefba89b146ca8bc13ff 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2589 079b42ed1f87aefba89b146ca8bc13ff 144 SUPERFAMILY SSF46955 8 129 2.53E-29 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_2589 079b42ed1f87aefba89b146ca8bc13ff 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 4.7E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2589 079b42ed1f87aefba89b146ca8bc13ff 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 4.7E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2589 079b42ed1f87aefba89b146ca8bc13ff 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 4.7E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2589 079b42ed1f87aefba89b146ca8bc13ff 144 SMART SM00422 8 77 4.9E-29 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2589 079b42ed1f87aefba89b146ca8bc13ff 144 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 5.4E-55 T 12-10-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 PA257_0437 017f748384755b133aef000d940ba85c 83 Pfam PF00037 4Fe-4S binding domain 5 25 3.3E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_0437 017f748384755b133aef000d940ba85c 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_0437 017f748384755b133aef000d940ba85c 83 SUPERFAMILY SSF54862 5 76 1.08E-19 T 12-10-2018 PA257_0437 017f748384755b133aef000d940ba85c 83 Gene3D G3DSA:3.30.70.20 2 83 1.5E-36 T 12-10-2018 PA257_0693 23294c78eaec8a7f8dc39b0f0237e9ad 265 Pfam PF01261 Xylose isomerase-like TIM barrel 21 217 1.5E-34 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PA257_0693 23294c78eaec8a7f8dc39b0f0237e9ad 265 Gene3D G3DSA:3.20.20.150 1 262 2.0E-78 T 12-10-2018 PA257_0693 23294c78eaec8a7f8dc39b0f0237e9ad 265 SUPERFAMILY SSF51658 1 258 5.5E-85 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily PA257_0693 23294c78eaec8a7f8dc39b0f0237e9ad 265 PIRSF PIRSF006241 1 262 1.1E-94 T 12-10-2018 IPR026040 Hydroxypyruvate isomerase-like PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 SMART SM00382 167 318 6.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 Pfam PF00072 Response regulator receiver domain 11 119 4.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 SUPERFAMILY SSF52172 9 192 3.27E-39 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 Gene3D G3DSA:3.40.50.2300 1 140 2.4E-32 T 12-10-2018 PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 Gene3D G3DSA:1.10.10.60 407 449 4.3E-8 T 12-10-2018 PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 Pfam PF00158 Sigma-54 interaction domain 149 313 3.4E-62 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 Gene3D G3DSA:1.10.8.60 318 397 2.9E-25 T 12-10-2018 PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 Pfam PF02954 Bacterial regulatory protein, Fis family 407 447 1.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 SUPERFAMILY SSF52540 150 388 2.33E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 Gene3D G3DSA:3.40.50.300 141 317 1.7E-60 T 12-10-2018 PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 SUPERFAMILY SSF46689 360 449 2.09E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 SMART SM00448 9 120 2.4E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6884 73708b9d536b7b227e80dfb1e212b6a8 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_2036 327567fab987e6c60e2444af0424acdc 265 SUPERFAMILY SSF161098 6 263 8.5E-43 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2036 327567fab987e6c60e2444af0424acdc 265 Gene3D G3DSA:1.10.3720.10 4 259 2.3E-38 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2036 327567fab987e6c60e2444af0424acdc 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 262 1.3E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_6367 3a8404d75836b0c609fd317a4130d84d 320 Gene3D G3DSA:1.10.3720.10 114 319 1.7E-53 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6367 3a8404d75836b0c609fd317a4130d84d 320 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 117 211 7.2E-27 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_6367 3a8404d75836b0c609fd317a4130d84d 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 316 3.3E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_6367 3a8404d75836b0c609fd317a4130d84d 320 SUPERFAMILY SSF161098 117 302 7.85E-46 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4361 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 PRINTS PR01549 Autoinducer synthesis protein signature 97 109 6.2E-16 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_4361 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 PRINTS PR01549 Autoinducer synthesis protein signature 18 37 6.2E-16 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_4361 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 PRINTS PR01549 Autoinducer synthesis protein signature 142 163 6.2E-16 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_4361 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 PRINTS PR01549 Autoinducer synthesis protein signature 64 82 6.2E-16 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_4361 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 Pfam PF00765 Autoinducer synthase 12 185 1.0E-29 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_4361 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 Gene3D G3DSA:3.40.630.30 1 190 1.2E-57 T 12-10-2018 PA257_4361 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 SUPERFAMILY SSF55729 7 191 1.11E-34 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_4361 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 ProSitePatterns PS00949 Autoinducer synthase family signature. 22 47 - T 12-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_1163 54c8fc188f66233b4a7d6d8cc2c41e7b 345 SUPERFAMILY SSF52540 1 211 1.31E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1163 54c8fc188f66233b4a7d6d8cc2c41e7b 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 336 1.7E-111 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 PA257_1163 54c8fc188f66233b4a7d6d8cc2c41e7b 345 Gene3D G3DSA:1.20.272.10 215 342 1.3E-37 T 12-10-2018 PA257_1163 54c8fc188f66233b4a7d6d8cc2c41e7b 345 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 216 339 1.8E-13 T 12-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_1163 54c8fc188f66233b4a7d6d8cc2c41e7b 345 SUPERFAMILY SSF48019 213 337 3.49E-32 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PA257_1163 54c8fc188f66233b4a7d6d8cc2c41e7b 345 Gene3D G3DSA:1.10.8.60 145 213 1.1E-27 T 12-10-2018 PA257_1163 54c8fc188f66233b4a7d6d8cc2c41e7b 345 Gene3D G3DSA:3.40.50.300 1 136 1.1E-52 T 12-10-2018 PA257_1163 54c8fc188f66233b4a7d6d8cc2c41e7b 345 Pfam PF06144 DNA polymerase III, delta subunit 20 191 6.6E-33 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 PA257_3890 50d335218ddc9d8958c2a6898ed5c2ec 228 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 219 1.7E-71 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 PA257_3890 50d335218ddc9d8958c2a6898ed5c2ec 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 217 3.9E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3890 50d335218ddc9d8958c2a6898ed5c2ec 228 SUPERFAMILY SSF161098 6 218 1.31E-46 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3890 50d335218ddc9d8958c2a6898ed5c2ec 228 Gene3D G3DSA:1.10.3720.10 2 223 1.6E-54 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0702 f4d4aaf65096f0fbc3f14561786fb486 373 SUPERFAMILY SSF160996 171 317 7.85E-40 T 12-10-2018 PA257_0702 f4d4aaf65096f0fbc3f14561786fb486 373 Gene3D G3DSA:3.50.50.60 2 370 4.2E-120 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0702 f4d4aaf65096f0fbc3f14561786fb486 373 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 2 371 1.1E-116 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PA257_0702 f4d4aaf65096f0fbc3f14561786fb486 373 SUPERFAMILY SSF51905 2 372 2.04E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0702 f4d4aaf65096f0fbc3f14561786fb486 373 Gene3D G3DSA:2.40.30.10 169 318 4.2E-120 T 12-10-2018 PA257_0702 f4d4aaf65096f0fbc3f14561786fb486 373 Pfam PF03486 HI0933-like protein 2 371 3.2E-139 T 12-10-2018 PA257_0702 f4d4aaf65096f0fbc3f14561786fb486 373 Gene3D G3DSA:1.10.8.260 242 301 4.2E-120 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily PA257_0103 3c5c189567de428244a856f99633805b 344 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 3 340 1.3E-98 T 12-10-2018 IPR017740 Type VI secretion system-associated, ImpA PA257_0103 3c5c189567de428244a856f99633805b 344 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 131 1.2E-33 T 12-10-2018 IPR010657 ImpA, N-terminal PA257_2030 91cc378e6d187665d8c6dbea75f826aa 159 SMART SM00671 123 159 0.0041 T 12-10-2018 IPR006597 Sel1-like repeat PA257_2030 91cc378e6d187665d8c6dbea75f826aa 159 SMART SM00671 86 122 11.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_2030 91cc378e6d187665d8c6dbea75f826aa 159 Gene3D G3DSA:1.25.40.10 6 159 1.8E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2030 91cc378e6d187665d8c6dbea75f826aa 159 SUPERFAMILY SSF81901 41 158 6.8E-13 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 Gene3D G3DSA:3.30.2090.10 181 277 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1038 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 Gene3D G3DSA:3.30.70.1320 133 334 0.0 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 Gene3D G3DSA:3.30.70.1440 668 864 0.0 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 Gene3D G3DSA:1.20.1640.10 515 1021 0.0 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 SUPERFAMILY SSF82693 567 670 4.03E-24 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 Gene3D G3DSA:3.30.70.1430 569 667 0.0 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 9.0E-100 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 9.0E-100 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 9.0E-100 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 9.0E-100 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 9.0E-100 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.0E-100 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 9.0E-100 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 9.0E-100 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.0E-100 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1023 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 SUPERFAMILY SSF82693 148 332 4.24E-21 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 Gene3D G3DSA:1.20.1640.10 8 514 0.0 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 Gene3D G3DSA:3.30.2090.10 720 808 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 SUPERFAMILY SSF82693 38 129 1.74E-23 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 Gene3D G3DSA:3.30.70.1430 38 816 0.0 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 SUPERFAMILY SSF82866 298 499 1.05E-49 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 SUPERFAMILY SSF82714 721 806 5.36E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 SUPERFAMILY SSF82866 804 1026 4.71E-47 T 12-10-2018 PA257_5778 0273fd3f2768b9cd50187fe196aff426 1043 SUPERFAMILY SSF82714 185 274 3.53E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_1365 2e6271363a20a44eb1afc805b069640c 371 Gene3D G3DSA:3.30.413.10 264 363 5.0E-26 T 12-10-2018 PA257_1365 2e6271363a20a44eb1afc805b069640c 371 SUPERFAMILY SSF51717 17 209 1.49E-10 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_1365 2e6271363a20a44eb1afc805b069640c 371 SUPERFAMILY SSF56014 267 354 3.6E-12 T 12-10-2018 PA257_1365 2e6271363a20a44eb1afc805b069640c 371 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 11 353 5.4E-133 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PA257_1365 2e6271363a20a44eb1afc805b069640c 371 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 9 361 35.441 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PA257_1365 2e6271363a20a44eb1afc805b069640c 371 Gene3D G3DSA:3.20.20.20 1 263 2.3E-108 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_1365 2e6271363a20a44eb1afc805b069640c 371 Pfam PF04551 GcpE protein 15 354 7.9E-137 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PA257_1365 2e6271363a20a44eb1afc805b069640c 371 PIRSF PIRSF004640 3 364 9.7E-151 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PA257_5395 d197baff9569ef073f469e78ed535a52 308 SUPERFAMILY SSF63380 100 179 8.96E-17 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_5395 d197baff9569ef073f469e78ed535a52 308 SUPERFAMILY SSF54292 8 85 1.84E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_5395 d197baff9569ef073f469e78ed535a52 308 Gene3D G3DSA:3.40.50.80 188 307 3.4E-16 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_5395 d197baff9569ef073f469e78ed535a52 308 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 118 128 3.7E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5395 d197baff9569ef073f469e78ed535a52 308 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 134 141 3.7E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5395 d197baff9569ef073f469e78ed535a52 308 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 195 214 3.7E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5395 d197baff9569ef073f469e78ed535a52 308 Gene3D G3DSA:2.40.30.10 93 183 1.1E-13 T 12-10-2018 PA257_5395 d197baff9569ef073f469e78ed535a52 308 Pfam PF00175 Oxidoreductase NAD-binding domain 196 254 3.1E-6 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_5395 d197baff9569ef073f469e78ed535a52 308 SUPERFAMILY SSF52343 188 305 1.14E-20 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_5395 d197baff9569ef073f469e78ed535a52 308 PRINTS PR00410 Phenol hydroxylase reductase family signature 195 214 7.7E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_5395 d197baff9569ef073f469e78ed535a52 308 PRINTS PR00410 Phenol hydroxylase reductase family signature 134 141 7.7E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_5395 d197baff9569ef073f469e78ed535a52 308 PRINTS PR00410 Phenol hydroxylase reductase family signature 288 296 7.7E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PA257_5395 d197baff9569ef073f469e78ed535a52 308 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 76 1.9E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_5395 d197baff9569ef073f469e78ed535a52 308 Gene3D G3DSA:3.10.20.30 3 86 2.4E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_0695 2b149734a4e255614f519101b8299e55 387 Gene3D G3DSA:3.40.50.1260 165 373 5.4E-150 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 Pfam PF00162 Phosphoglycerate kinase 6 373 9.5E-140 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 Gene3D G3DSA:3.40.50.1260 10 379 5.4E-150 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.829 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 9.0E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 9.0E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 9.0E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 9.0E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 9.0E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 9.0E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 9.0E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 9.0E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 9.0E-80 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 SUPERFAMILY SSF53748 4 383 1.17E-143 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_0695 2b149734a4e255614f519101b8299e55 387 PIRSF PIRSF000724 1 387 1.8E-131 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 Gene3D G3DSA:1.20.1640.10 508 1012 1.2E-254 T 12-10-2018 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 SUPERFAMILY SSF82866 301 490 2.22E-36 T 12-10-2018 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 PRINTS PR00702 Acriflavin resistance protein family signature 547 564 3.0E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 SUPERFAMILY SSF82714 714 800 2.75E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 Gene3D G3DSA:3.30.70.1440 661 860 1.2E-254 T 12-10-2018 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 Gene3D G3DSA:1.20.1640.10 14 507 1.2E-254 T 12-10-2018 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 SUPERFAMILY SSF82866 796 1020 3.79E-47 T 12-10-2018 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 SUPERFAMILY SSF82693 566 659 7.59E-5 T 12-10-2018 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 SUPERFAMILY SSF82693 42 136 1.83E-19 T 12-10-2018 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 Pfam PF00873 AcrB/AcrD/AcrF family 7 1013 9.2E-172 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 Gene3D G3DSA:3.30.70.1430 42 808 1.2E-254 T 12-10-2018 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 SUPERFAMILY SSF82714 187 267 1.7E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 Gene3D G3DSA:3.30.2090.10 181 270 1.2E-254 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 Gene3D G3DSA:3.30.70.1430 562 660 1.2E-254 T 12-10-2018 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 Gene3D G3DSA:3.30.2090.10 712 800 1.2E-254 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 SUPERFAMILY SSF82693 140 325 6.28E-17 T 12-10-2018 PA257_1545 a73a5239bca59379e740cd8b5ad41945 1025 Gene3D G3DSA:3.30.70.1320 138 328 1.2E-254 T 12-10-2018 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 Pfam PF03129 Anticodon binding domain 540 628 3.7E-19 T 12-10-2018 IPR004154 Anticodon-binding PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 Pfam PF02824 TGS domain 4 61 4.7E-10 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 Gene3D G3DSA:3.30.54.20 130 186 1.9E-60 T 12-10-2018 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 Gene3D G3DSA:3.10.20.30 3 63 2.5E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 SUPERFAMILY SSF81271 3 61 7.52E-15 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 528 7.7E-46 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 SUPERFAMILY SSF55186 63 240 2.62E-64 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 2.8E-223 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 Gene3D G3DSA:3.30.980.10 69 221 1.9E-60 T 12-10-2018 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 Gene3D G3DSA:3.40.50.800 531 639 1.3E-28 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 218 3.0E-14 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 Gene3D G3DSA:3.30.930.10 222 530 5.9E-129 T 12-10-2018 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 3.6E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 3.6E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 3.6E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 3.6E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 3.6E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.102 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 SUPERFAMILY SSF55681 242 525 5.36E-101 T 12-10-2018 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 SUPERFAMILY SSF52954 528 632 3.93E-30 T 12-10-2018 PA257_2800 6ef907b551124f1fa0278c8fe8e39149 640 SMART SM00863 169 218 2.1E-20 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PA257_6283 3184e96e76a2041f838746f7b15e61b5 429 Gene3D G3DSA:1.20.140.10 298 429 2.7E-37 T 12-10-2018 PA257_6283 3184e96e76a2041f838746f7b15e61b5 429 SUPERFAMILY SSF47203 298 425 1.39E-37 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_6283 3184e96e76a2041f838746f7b15e61b5 429 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 73 186 2.7E-18 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_6283 3184e96e76a2041f838746f7b15e61b5 429 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 397 416 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_6283 3184e96e76a2041f838746f7b15e61b5 429 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 192 281 5.4E-10 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_6283 3184e96e76a2041f838746f7b15e61b5 429 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 299 425 7.0E-31 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_6283 3184e96e76a2041f838746f7b15e61b5 429 SUPERFAMILY SSF56645 68 290 2.09E-44 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_6283 3184e96e76a2041f838746f7b15e61b5 429 Gene3D G3DSA:1.10.540.10 64 186 1.1E-21 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_6283 3184e96e76a2041f838746f7b15e61b5 429 Gene3D G3DSA:2.40.110.10 191 297 6.7E-19 T 12-10-2018 PA257_5095 3d90e2896360c4884605b0226fdf0b80 415 SUPERFAMILY SSF103473 7 405 5.23E-62 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_5095 3d90e2896360c4884605b0226fdf0b80 415 Gene3D G3DSA:1.20.1250.20 218 405 3.9E-20 T 12-10-2018 PA257_5095 3d90e2896360c4884605b0226fdf0b80 415 Pfam PF07690 Major Facilitator Superfamily 22 369 3.3E-48 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_5095 3d90e2896360c4884605b0226fdf0b80 415 Gene3D G3DSA:1.20.1250.20 7 199 5.8E-33 T 12-10-2018 PA257_6838 ed46abd9bb81e1013c0302fc67ceedfc 464 Gene3D G3DSA:2.40.30.10 350 435 3.2E-10 T 12-10-2018 PA257_6838 ed46abd9bb81e1013c0302fc67ceedfc 464 ProSitePatterns PS01276 Peptidase family U32 signature. 166 184 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PA257_6838 ed46abd9bb81e1013c0302fc67ceedfc 464 Pfam PF01136 Peptidase family U32 80 337 9.8E-98 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PA257_6838 ed46abd9bb81e1013c0302fc67ceedfc 464 Pfam PF16325 Peptidase family U32 C-terminal domain 354 435 4.6E-20 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal PA257_3323 b3c028a03cc690c780fb7c33f9388d01 121 SUPERFAMILY SSF51182 29 117 2.89E-14 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_3323 b3c028a03cc690c780fb7c33f9388d01 121 Gene3D G3DSA:2.60.120.10 9 120 7.1E-17 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_3323 b3c028a03cc690c780fb7c33f9388d01 121 Pfam PF05899 Protein of unknown function (DUF861) 44 117 2.7E-17 T 12-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 3.7E-22 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.2E-22 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:3.30.230.70 1 229 6.2E-80 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:3.30.230.70 233 550 3.6E-115 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:3.30.1370.10 551 622 1.3E-21 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 SMART SM00316 621 691 8.9E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 692 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF50249 615 693 1.94E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF00575 S1 RNA binding domain 620 691 3.8E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 9.2E-6 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF03725 3' exoribonuclease family, domain 2 146 210 4.4E-11 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF54791 556 641 7.01E-24 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 8.2E-23 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.536 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:2.40.50.140 623 694 3.3E-29 T 12-10-2018 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 SMART SM00322 553 618 2.4E-13 T 12-10-2018 IPR004087 K Homology domain GO:0003676 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF00013 KH domain 558 613 2.6E-12 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF54211 3 143 4.0E-50 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF55666 451 550 4.49E-29 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 PIRSF PIRSF005499 1 700 4.9E-294 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF55666 144 235 8.41E-27 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_5954 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF54211 293 489 1.92E-49 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_1985 3a5f10b122c8b072cf954328adb85671 476 SUPERFAMILY SSF53649 40 474 7.03E-134 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_1985 3a5f10b122c8b072cf954328adb85671 476 SMART SM00098 69 475 2.8E-184 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PA257_1985 3a5f10b122c8b072cf954328adb85671 476 Pfam PF00245 Alkaline phosphatase 68 433 1.3E-116 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PA257_1985 3a5f10b122c8b072cf954328adb85671 476 Pfam PF00245 Alkaline phosphatase 435 473 5.7E-7 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PA257_1985 3a5f10b122c8b072cf954328adb85671 476 PRINTS PR00113 Alkaline phosphatase signature 125 140 2.6E-46 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PA257_1985 3a5f10b122c8b072cf954328adb85671 476 PRINTS PR00113 Alkaline phosphatase signature 162 182 2.6E-46 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PA257_1985 3a5f10b122c8b072cf954328adb85671 476 PRINTS PR00113 Alkaline phosphatase signature 225 235 2.6E-46 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PA257_1985 3a5f10b122c8b072cf954328adb85671 476 PRINTS PR00113 Alkaline phosphatase signature 324 353 2.6E-46 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PA257_1985 3a5f10b122c8b072cf954328adb85671 476 PRINTS PR00113 Alkaline phosphatase signature 68 88 2.6E-46 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PA257_1985 3a5f10b122c8b072cf954328adb85671 476 Gene3D G3DSA:3.40.720.10 29 475 2.7E-152 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_1985 3a5f10b122c8b072cf954328adb85671 476 ProSitePatterns PS00123 Alkaline phosphatase active site. 125 133 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PA257_2584 907d0dfdb0d250508a9ca6da29d30f3a 121 Gene3D G3DSA:1.10.1660.10 1 121 3.1E-15 T 12-10-2018 PA257_2584 907d0dfdb0d250508a9ca6da29d30f3a 121 SUPERFAMILY SSF46955 4 108 3.3E-16 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_2584 907d0dfdb0d250508a9ca6da29d30f3a 121 SMART SM00422 4 73 5.0E-20 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2584 907d0dfdb0d250508a9ca6da29d30f3a 121 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 119 9.1E-63 T 12-10-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 PA257_2584 907d0dfdb0d250508a9ca6da29d30f3a 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 8.0E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2584 907d0dfdb0d250508a9ca6da29d30f3a 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 8.0E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2584 907d0dfdb0d250508a9ca6da29d30f3a 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 8.0E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2584 907d0dfdb0d250508a9ca6da29d30f3a 121 Pfam PF13411 MerR HTH family regulatory protein 4 72 8.2E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0980 d45de4c1e3cc3f2e706a515ab07c5bb8 264 PIRSF PIRSF000398 1 259 5.5E-49 T 12-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 PA257_0980 d45de4c1e3cc3f2e706a515ab07c5bb8 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 30 44 9.0E-15 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_0980 d45de4c1e3cc3f2e706a515ab07c5bb8 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 9.0E-15 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_0980 d45de4c1e3cc3f2e706a515ab07c5bb8 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 172 184 9.0E-15 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_0980 d45de4c1e3cc3f2e706a515ab07c5bb8 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 9.0E-15 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_0980 d45de4c1e3cc3f2e706a515ab07c5bb8 264 Gene3D G3DSA:3.40.50.150 7 224 2.5E-45 T 12-10-2018 PA257_0980 d45de4c1e3cc3f2e706a515ab07c5bb8 264 Gene3D G3DSA:1.10.1020.10 58 152 2.5E-45 T 12-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 PA257_0980 d45de4c1e3cc3f2e706a515ab07c5bb8 264 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 185 3.6E-25 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_0980 d45de4c1e3cc3f2e706a515ab07c5bb8 264 SUPERFAMILY SSF53335 4 254 1.66E-59 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5827 364020ed9e2860f55618740b57ec402e 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 131 1.5E-11 T 12-10-2018 IPR028973 PhnB-like PA257_5827 364020ed9e2860f55618740b57ec402e 137 Gene3D G3DSA:3.10.180.10 7 137 2.8E-43 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_5827 364020ed9e2860f55618740b57ec402e 137 SUPERFAMILY SSF54593 1 135 9.35E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_6881 bffef71379ca405015767e30450b610e 444 Pfam PF00375 Sodium:dicarboxylate symporter family 8 410 3.0E-119 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PA257_6881 bffef71379ca405015767e30450b610e 444 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 427 42.692 T 12-10-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 PA257_6881 bffef71379ca405015767e30450b610e 444 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 305 328 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site PA257_6881 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 4.2E-53 T 12-10-2018 PA257_6881 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 4.2E-53 T 12-10-2018 PA257_6881 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 154 176 4.2E-53 T 12-10-2018 PA257_6881 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 4.2E-53 T 12-10-2018 PA257_6881 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 4.2E-53 T 12-10-2018 PA257_6881 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 4.2E-53 T 12-10-2018 PA257_6881 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 202 221 4.2E-53 T 12-10-2018 PA257_6881 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 364 384 4.2E-53 T 12-10-2018 PA257_6881 bffef71379ca405015767e30450b610e 444 Gene3D G3DSA:1.10.3860.10 2 423 3.9E-138 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 PA257_6881 bffef71379ca405015767e30450b610e 444 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site PA257_6881 bffef71379ca405015767e30450b610e 444 SUPERFAMILY SSF118215 8 411 6.8E-125 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 SUPERFAMILY SSF82714 735 820 2.35E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3079 07a678727026609e24cd466e502c6bd5 1062 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1051 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 SUPERFAMILY SSF82866 844 1040 3.01E-46 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 Pfam PF00873 AcrB/AcrD/AcrF family 3 1040 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 Gene3D G3DSA:3.30.2090.10 734 822 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3079 07a678727026609e24cd466e502c6bd5 1062 SUPERFAMILY SSF82693 138 333 2.2E-28 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 SUPERFAMILY SSF82693 41 134 4.19E-25 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 SUPERFAMILY SSF82866 299 499 2.75E-50 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 Gene3D G3DSA:3.30.70.1320 135 335 0.0 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 SUPERFAMILY SSF82714 185 274 8.37E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3079 07a678727026609e24cd466e502c6bd5 1062 Gene3D G3DSA:3.30.70.1430 578 679 0.0 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.4E-94 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 3.4E-94 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 3.4E-94 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 3.4E-94 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.4E-94 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 3.4E-94 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.4E-94 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 3.4E-94 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.4E-94 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 Gene3D G3DSA:1.20.1640.10 10 523 0.0 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 Gene3D G3DSA:1.20.1640.10 524 1036 0.0 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 Gene3D G3DSA:3.30.70.1440 680 879 0.0 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 SUPERFAMILY SSF82693 576 682 2.14E-27 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 SUPERFAMILY SSF82693 683 870 6.54E-25 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 Gene3D G3DSA:3.30.70.1430 40 830 0.0 T 12-10-2018 PA257_3079 07a678727026609e24cd466e502c6bd5 1062 Gene3D G3DSA:3.30.2090.10 181 278 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_2193 3f608b07226f9d6d91c88b73f49dc89a 502 Gene3D G3DSA:3.40.50.300 228 502 3.3E-119 T 12-10-2018 PA257_2193 3f608b07226f9d6d91c88b73f49dc89a 502 SUPERFAMILY SSF52540 112 499 9.46E-106 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2193 3f608b07226f9d6d91c88b73f49dc89a 502 SUPERFAMILY SSF160246 17 81 2.43E-14 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily PA257_2193 3f608b07226f9d6d91c88b73f49dc89a 502 Pfam PF00437 Type II/IV secretion system protein 129 394 1.3E-92 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_2193 3f608b07226f9d6d91c88b73f49dc89a 502 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 322 336 - T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_2193 3f608b07226f9d6d91c88b73f49dc89a 502 Gene3D G3DSA:3.30.450.90 96 227 4.7E-53 T 12-10-2018 PA257_2193 3f608b07226f9d6d91c88b73f49dc89a 502 Gene3D G3DSA:3.30.300.160 9 95 1.2E-12 T 12-10-2018 PA257_2193 3f608b07226f9d6d91c88b73f49dc89a 502 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 17 499 9.0E-217 T 12-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 PA257_6484 b60f3f96da6faec1fa68571e777ec340 39 Pfam PF06528 Phage P2 GpE 1 36 1.3E-19 T 12-10-2018 IPR009493 Burkholderia phage phiE202, Gp27 PA257_1757 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 242 261 3.9E-20 T 12-10-2018 PA257_1757 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 77 95 3.9E-20 T 12-10-2018 PA257_1757 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 224 241 3.9E-20 T 12-10-2018 PA257_1757 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 39 57 3.9E-20 T 12-10-2018 PA257_1757 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 116 138 3.9E-20 T 12-10-2018 PA257_1757 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 262 282 3.9E-20 T 12-10-2018 PA257_1757 1681538648886e370c2786f3261a0b48 321 Gene3D G3DSA:3.30.1330.60 167 288 3.6E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_1757 1681538648886e370c2786f3261a0b48 321 Pfam PF00691 OmpA family 178 273 7.4E-19 T 12-10-2018 IPR006665 OmpA-like domain PA257_1757 1681538648886e370c2786f3261a0b48 321 SUPERFAMILY SSF103088 149 278 4.58E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_1757 1681538648886e370c2786f3261a0b48 321 Gene3D G3DSA:2.60.40.2540 17 166 5.1E-32 T 12-10-2018 PA257_1065 7d22dbfd8a307d321a3ade000fd25c32 246 Gene3D G3DSA:2.60.40.10 151 243 2.2E-13 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_1065 7d22dbfd8a307d321a3ade000fd25c32 246 Gene3D G3DSA:2.60.40.10 29 147 3.8E-35 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_1065 7d22dbfd8a307d321a3ade000fd25c32 246 SUPERFAMILY SSF49584 140 235 1.2E-10 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily PA257_1065 7d22dbfd8a307d321a3ade000fd25c32 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 235 5.1E-9 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal PA257_1065 7d22dbfd8a307d321a3ade000fd25c32 246 SUPERFAMILY SSF49354 23 146 1.2E-34 T 12-10-2018 IPR008962 PapD-like superfamily PA257_1065 7d22dbfd8a307d321a3ade000fd25c32 246 PRINTS PR00969 Pili chaperone signature 128 143 4.8E-20 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_1065 7d22dbfd8a307d321a3ade000fd25c32 246 PRINTS PR00969 Pili chaperone signature 104 121 4.8E-20 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_1065 7d22dbfd8a307d321a3ade000fd25c32 246 PRINTS PR00969 Pili chaperone signature 27 36 4.8E-20 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_1065 7d22dbfd8a307d321a3ade000fd25c32 246 PRINTS PR00969 Pili chaperone signature 76 97 4.8E-20 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_1065 7d22dbfd8a307d321a3ade000fd25c32 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 146 1.5E-34 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PA257_6849 72fd0c8f5bec5ef5e8220e6dc3071a1b 421 Gene3D G3DSA:3.40.50.300 27 259 1.9E-46 T 12-10-2018 PA257_6849 72fd0c8f5bec5ef5e8220e6dc3071a1b 421 SMART SM00382 50 239 4.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6849 72fd0c8f5bec5ef5e8220e6dc3071a1b 421 Pfam PF00005 ABC transporter 41 173 3.2E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6849 72fd0c8f5bec5ef5e8220e6dc3071a1b 421 Pfam PF14524 Wzt C-terminal domain 260 398 2.0E-33 T 12-10-2018 IPR029439 Wzt, C-terminal PA257_6849 72fd0c8f5bec5ef5e8220e6dc3071a1b 421 SUPERFAMILY SSF52540 38 237 7.62E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6849 72fd0c8f5bec5ef5e8220e6dc3071a1b 421 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6849 72fd0c8f5bec5ef5e8220e6dc3071a1b 421 Gene3D G3DSA:2.70.50.60 260 395 6.0E-19 T 12-10-2018 PA257_0940 cad7219e7a641ef9da46dadcb49fec4e 222 SMART SM00287 41 104 6.4E-7 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type PA257_0940 cad7219e7a641ef9da46dadcb49fec4e 222 Pfam PF08239 Bacterial SH3 domain 53 101 2.5E-10 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type PA257_0940 cad7219e7a641ef9da46dadcb49fec4e 222 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 45 221 1.7E-42 T 12-10-2018 IPR016476 SH3 domain protein PA257_0940 cad7219e7a641ef9da46dadcb49fec4e 222 PIRSF PIRSF006158 15 222 8.3E-75 T 12-10-2018 IPR016476 SH3 domain protein PA257_0940 cad7219e7a641ef9da46dadcb49fec4e 222 Gene3D G3DSA:2.30.30.40 46 101 2.1E-9 T 12-10-2018 PA257_1055 fbcc274e61d8ec89afce90e311d92807 170 Pfam PF01613 Flavin reductase like domain 15 163 3.7E-28 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PA257_1055 fbcc274e61d8ec89afce90e311d92807 170 SMART SM00903 15 162 1.0E-52 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PA257_1055 fbcc274e61d8ec89afce90e311d92807 170 Gene3D G3DSA:2.30.110.10 2 167 8.0E-45 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PA257_1055 fbcc274e61d8ec89afce90e311d92807 170 SUPERFAMILY SSF50475 11 163 2.21E-47 T 12-10-2018 PA257_1055 fbcc274e61d8ec89afce90e311d92807 170 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 11 163 4.0E-72 T 12-10-2018 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 KEGG: 00740+1.5.1.36 PA257_4260 a913f23dea18a178976be756784c78d4 289 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 279 23.724 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 PA257_4260 a913f23dea18a178976be756784c78d4 289 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 149 276 4.4E-49 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 PA257_4260 a913f23dea18a178976be756784c78d4 289 Gene3D G3DSA:3.30.1400.10 146 284 6.8E-55 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 PA257_4260 a913f23dea18a178976be756784c78d4 289 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 150 277 7.0E-70 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 PA257_4260 a913f23dea18a178976be756784c78d4 289 SUPERFAMILY SSF64383 147 283 2.75E-47 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 PA257_4260 a913f23dea18a178976be756784c78d4 289 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 5 277 1.1E-105 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 PA257_4260 a913f23dea18a178976be756784c78d4 289 SMART SM00771 147 277 7.5E-71 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 PA257_6358 54656cc369e5d5f7d2332f15ef76b2c1 134 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 104 1.7E-33 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PA257_6358 54656cc369e5d5f7d2332f15ef76b2c1 134 SUPERFAMILY SSF141734 4 120 4.84E-49 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 PA257_6358 54656cc369e5d5f7d2332f15ef76b2c1 134 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 104 1.0E-24 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PA257_6358 54656cc369e5d5f7d2332f15ef76b2c1 134 Gene3D G3DSA:3.10.20.400 3 95 3.4E-38 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 PA257_6358 54656cc369e5d5f7d2332f15ef76b2c1 134 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 108 32.986 T 12-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PA257_1191 7119d4d682a8ebb7d19c9dec51858916 298 Gene3D G3DSA:1.20.1510.10 12 208 1.8E-56 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PA257_1191 7119d4d682a8ebb7d19c9dec51858916 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 290 2.9E-65 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PA257_1191 7119d4d682a8ebb7d19c9dec51858916 298 Gene3D G3DSA:3.30.70.1350 209 292 4.4E-25 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 PA257_1191 7119d4d682a8ebb7d19c9dec51858916 298 SUPERFAMILY SSF161111 12 209 2.75E-52 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PA257_1191 7119d4d682a8ebb7d19c9dec51858916 298 Pfam PF01545 Cation efflux family 17 208 2.2E-37 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PA257_1191 7119d4d682a8ebb7d19c9dec51858916 298 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 288 1.6E-22 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain PA257_1191 7119d4d682a8ebb7d19c9dec51858916 298 SUPERFAMILY SSF160240 212 289 8.5E-21 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 SMART SM01018 662 745 7.7E-40 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 SUPERFAMILY SSF47644 657 744 3.66E-28 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Gene3D G3DSA:1.10.288.10 944 1100 2.6E-137 T 12-10-2018 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Pfam PF02607 B12 binding domain 664 737 2.4E-24 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 SUPERFAMILY SSF52242 748 900 3.01E-44 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 SUPERFAMILY SSF51717 363 636 1.83E-87 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Pfam PF00809 Pterin binding enzyme 367 605 4.2E-56 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 SUPERFAMILY SSF56507 909 1233 1.44E-126 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Gene3D G3DSA:3.20.20.20 347 649 7.7E-128 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Gene3D G3DSA:3.40.50.280 750 902 3.4E-54 T 12-10-2018 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Pfam PF02574 Homocysteine S-methyltransferase 24 332 8.4E-79 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Gene3D G3DSA:1.10.1240.10 654 742 8.2E-40 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 PIRSF PIRSF000381 8 1203 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Pfam PF02310 B12 binding domain 754 847 1.9E-19 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Gene3D G3DSA:3.10.196.10 915 1231 2.6E-137 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 SUPERFAMILY SSF82282 15 406 2.35E-116 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 946 1216 9.0E-123 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 Gene3D G3DSA:3.20.20.330 8 345 8.1E-128 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 PA257_3912 894550d3248804946ad7e14a61d13d23 1234 TIGRFAM TIGR02082 metH: methionine synthase 20 1200 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_4805 184455f28ed5a5414ecf6559c04a7ee2 451 Pfam PF07690 Major Facilitator Superfamily 27 380 9.6E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4805 184455f28ed5a5414ecf6559c04a7ee2 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 311 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_4805 184455f28ed5a5414ecf6559c04a7ee2 451 Gene3D G3DSA:1.20.1250.20 236 417 2.0E-25 T 12-10-2018 PA257_4805 184455f28ed5a5414ecf6559c04a7ee2 451 Gene3D G3DSA:1.20.1250.20 13 218 3.6E-42 T 12-10-2018 PA257_4805 184455f28ed5a5414ecf6559c04a7ee2 451 SUPERFAMILY SSF103473 11 414 1.83E-77 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_2025 683c747fa89c692545648b408245bde4 253 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 137 225 9.7E-26 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PA257_2025 683c747fa89c692545648b408245bde4 253 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 130 1.7E-31 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PA257_2025 683c747fa89c692545648b408245bde4 253 Gene3D G3DSA:3.10.50.40 91 251 2.5E-53 T 12-10-2018 PA257_2025 683c747fa89c692545648b408245bde4 253 SUPERFAMILY SSF54534 30 228 1.79E-56 T 12-10-2018 PA257_2025 683c747fa89c692545648b408245bde4 253 Gene3D G3DSA:1.10.287.460 27 90 2.6E-20 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 PA257_6851 eb8c5fe3d6e7bcd2e5f8c761c606b1b9 479 SUPERFAMILY SSF51182 189 477 5.56E-77 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_6851 eb8c5fe3d6e7bcd2e5f8c761c606b1b9 479 Pfam PF00483 Nucleotidyl transferase 4 291 7.8E-54 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PA257_6851 eb8c5fe3d6e7bcd2e5f8c761c606b1b9 479 Gene3D G3DSA:2.60.120.10 365 470 2.6E-16 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_6851 eb8c5fe3d6e7bcd2e5f8c761c606b1b9 479 SUPERFAMILY SSF53448 2 286 4.16E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6851 eb8c5fe3d6e7bcd2e5f8c761c606b1b9 479 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 1.0E-67 T 12-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 PA257_6851 eb8c5fe3d6e7bcd2e5f8c761c606b1b9 479 Gene3D G3DSA:3.90.550.10 2 358 9.9E-114 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6851 eb8c5fe3d6e7bcd2e5f8c761c606b1b9 479 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 477 2.0E-175 T 12-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 PA257_6252 0679abcce123f99e88ceb25b8544a9f1 272 SUPERFAMILY SSF56300 16 267 3.23E-55 T 12-10-2018 PA257_6252 0679abcce123f99e88ceb25b8544a9f1 272 Gene3D G3DSA:3.60.21.10 2 266 4.7E-72 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like PA257_6252 0679abcce123f99e88ceb25b8544a9f1 272 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 258 41.953 T 12-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 PA257_6252 0679abcce123f99e88ceb25b8544a9f1 272 Pfam PF00149 Calcineurin-like phosphoesterase 17 203 6.6E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PA257_6252 0679abcce123f99e88ceb25b8544a9f1 272 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 258 8.0E-26 T 12-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 Gene3D G3DSA:3.30.365.10 466 612 7.1E-285 T 12-10-2018 PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 SMART SM01008 40 147 4.8E-38 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 26 782 0.0 T 12-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 Gene3D G3DSA:3.30.365.10 161 414 7.1E-285 T 12-10-2018 PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 Gene3D G3DSA:3.30.365.10 148 774 7.1E-285 T 12-10-2018 PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 168 710 3.8E-210 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 Gene3D G3DSA:3.30.365.10 195 289 7.1E-285 T 12-10-2018 PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 Gene3D G3DSA:3.90.1170.50 26 147 7.1E-285 T 12-10-2018 PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 SUPERFAMILY SSF56003 148 780 1.2E-208 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 40 146 5.5E-22 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PA257_4266 029a4c72f4c2a2887718ff025ce7f611 799 SUPERFAMILY SSF54665 24 148 5.63E-38 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily PA257_4913 730f253eba41cfe5a5181cde90e7dd27 329 SUPERFAMILY SSF51735 102 298 1.84E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4913 730f253eba41cfe5a5181cde90e7dd27 329 Gene3D G3DSA:3.40.50.720 102 297 1.4E-141 T 12-10-2018 PA257_4913 730f253eba41cfe5a5181cde90e7dd27 329 Gene3D G3DSA:3.40.50.720 5 321 1.4E-141 T 12-10-2018 PA257_4913 730f253eba41cfe5a5181cde90e7dd27 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 327 3.9E-32 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PA257_4913 730f253eba41cfe5a5181cde90e7dd27 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PA257_4913 730f253eba41cfe5a5181cde90e7dd27 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PA257_4913 730f253eba41cfe5a5181cde90e7dd27 329 SUPERFAMILY SSF52283 2 134 2.02E-38 T 12-10-2018 PA257_4913 730f253eba41cfe5a5181cde90e7dd27 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PA257_4913 730f253eba41cfe5a5181cde90e7dd27 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 2.3E-60 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 55 612 6.2E-162 T 12-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 Gene3D G3DSA:3.30.1370.120 51 203 1.7E-58 T 12-10-2018 IPR038591 NolW-like superfamily PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 Pfam PF00263 Bacterial type II and III secretion system protein 437 603 6.1E-53 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 Pfam PF03958 Bacterial type II/III secretion system short domain 146 205 3.0E-9 T 12-10-2018 IPR005644 NolW-like PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 Pfam PF03958 Bacterial type II/III secretion system short domain 210 276 2.9E-13 T 12-10-2018 IPR005644 NolW-like PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 Pfam PF03958 Bacterial type II/III secretion system short domain 281 360 2.1E-16 T 12-10-2018 IPR005644 NolW-like PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 Gene3D G3DSA:3.30.1370.120 205 277 1.5E-18 T 12-10-2018 IPR038591 NolW-like superfamily PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 Gene3D G3DSA:3.30.1370.120 278 358 7.8E-16 T 12-10-2018 IPR038591 NolW-like superfamily PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 549 582 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 433 457 3.7E-39 T 12-10-2018 IPR001775 GspD/PilQ family PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 360 370 3.7E-39 T 12-10-2018 IPR001775 GspD/PilQ family PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 568 586 3.7E-39 T 12-10-2018 IPR001775 GspD/PilQ family PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 468 478 3.7E-39 T 12-10-2018 IPR001775 GspD/PilQ family PA257_2191 ed667c85404386c3d811a77fb3fabde1 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 591 605 3.7E-39 T 12-10-2018 IPR001775 GspD/PilQ family PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 PRINTS PR01592 Low calcium response V antigen signature 108 128 3.5E-70 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 PRINTS PR01592 Low calcium response V antigen signature 250 269 3.5E-70 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 PRINTS PR01592 Low calcium response V antigen signature 30 55 3.5E-70 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 PRINTS PR01592 Low calcium response V antigen signature 87 105 3.5E-70 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 PRINTS PR01592 Low calcium response V antigen signature 156 179 3.5E-70 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 PRINTS PR01592 Low calcium response V antigen signature 131 153 3.5E-70 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 PRINTS PR01592 Low calcium response V antigen signature 206 226 3.5E-70 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 PRINTS PR01592 Low calcium response V antigen signature 228 249 3.5E-70 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 PRINTS PR01592 Low calcium response V antigen signature 269 291 3.5E-70 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 Pfam PF04792 V antigen (LcrV) protein 74 294 1.0E-68 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PA257_4068 95dcc124a4ea23df2500d8fdce8811bb 294 SUPERFAMILY SSF103388 26 293 2.09E-99 T 12-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 PA257_1296 e441bd14d0c0d73b20a80855174b4727 329 SMART SM00729 13 216 7.8E-12 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_1296 e441bd14d0c0d73b20a80855174b4727 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 184 312 3.8E-38 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1296 e441bd14d0c0d73b20a80855174b4727 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 1.1E-111 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1296 e441bd14d0c0d73b20a80855174b4727 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 329 40.447 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1296 e441bd14d0c0d73b20a80855174b4727 329 Pfam PF13353 4Fe-4S single cluster domain 20 108 7.0E-8 T 12-10-2018 PA257_1296 e441bd14d0c0d73b20a80855174b4727 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1296 e441bd14d0c0d73b20a80855174b4727 329 Gene3D G3DSA:3.20.20.70 2 328 2.3E-84 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1296 e441bd14d0c0d73b20a80855174b4727 329 Pfam PF04055 Radical SAM superfamily 18 177 6.8E-30 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_1296 e441bd14d0c0d73b20a80855174b4727 329 SUPERFAMILY SSF102114 5 280 1.31E-74 T 12-10-2018 PA257_5315 4912c3282c4528f48ae7d8bbc0fb501f 392 Gene3D G3DSA:3.40.190.10 118 261 1.4E-143 T 12-10-2018 PA257_5315 4912c3282c4528f48ae7d8bbc0fb501f 392 Pfam PF12849 PBP superfamily domain 19 336 3.6E-31 T 12-10-2018 IPR024370 PBP domain PA257_5315 4912c3282c4528f48ae7d8bbc0fb501f 392 SUPERFAMILY SSF53850 25 391 3.26E-70 T 12-10-2018 PA257_5315 4912c3282c4528f48ae7d8bbc0fb501f 392 Gene3D G3DSA:3.40.190.260 26 390 1.4E-143 T 12-10-2018 PA257_6778 1190c4190f1612f85e5a47fbe3d314cc 355 Pfam PF03601 Conserved hypothetical protein 698 21 335 3.4E-115 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PA257_6778 1190c4190f1612f85e5a47fbe3d314cc 355 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 19 350 5.2E-115 T 12-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 PA257_0310 52984bf0dcc14c5f3b5d1822672c44f9 283 ProSitePatterns PS00397 Site-specific recombinases active site. 14 22 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PA257_0310 52984bf0dcc14c5f3b5d1822672c44f9 283 SMART SM00857 11 146 5.5E-55 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_0310 52984bf0dcc14c5f3b5d1822672c44f9 283 Pfam PF00239 Resolvase, N terminal domain 12 145 3.1E-42 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_0310 52984bf0dcc14c5f3b5d1822672c44f9 283 Gene3D G3DSA:3.40.50.1390 10 135 5.6E-43 T 12-10-2018 PA257_0310 52984bf0dcc14c5f3b5d1822672c44f9 283 SUPERFAMILY SSF46689 148 190 1.7E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0310 52984bf0dcc14c5f3b5d1822672c44f9 283 Gene3D G3DSA:1.10.10.60 148 193 2.9E-5 T 12-10-2018 PA257_0310 52984bf0dcc14c5f3b5d1822672c44f9 283 SUPERFAMILY SSF53041 12 145 1.44E-41 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PA257_4650 9ffdbfe23d9f74aefa548ed0bceebd7f 236 SMART SM00448 6 116 4.6E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4650 9ffdbfe23d9f74aefa548ed0bceebd7f 236 Gene3D G3DSA:3.40.50.2300 1 126 6.8E-34 T 12-10-2018 PA257_4650 9ffdbfe23d9f74aefa548ed0bceebd7f 236 SUPERFAMILY SSF46894 133 233 1.16E-28 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_4650 9ffdbfe23d9f74aefa548ed0bceebd7f 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 1.6E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_4650 9ffdbfe23d9f74aefa548ed0bceebd7f 236 SUPERFAMILY SSF52172 5 125 6.4E-38 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4650 9ffdbfe23d9f74aefa548ed0bceebd7f 236 SMART SM00862 156 232 3.4E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_4650 9ffdbfe23d9f74aefa548ed0bceebd7f 236 Pfam PF00072 Response regulator receiver domain 8 117 4.1E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4650 9ffdbfe23d9f74aefa548ed0bceebd7f 236 Gene3D G3DSA:1.10.10.10 132 236 4.6E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1223 b7768a9db68d2be5734632fceaedde3d 649 ProSitePatterns PS01303 BCCT family of transporters signature. 302 311 - T 12-10-2018 IPR018093 BCCT transporter, conserved site PA257_1223 b7768a9db68d2be5734632fceaedde3d 649 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 39 484 8.9E-156 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 PA257_1223 b7768a9db68d2be5734632fceaedde3d 649 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 1 486 3.8E-181 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 PA257_4619 37c830e3ebc6bede3db6eee57369001a 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_4619 37c830e3ebc6bede3db6eee57369001a 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 217 4.0E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_4619 37c830e3ebc6bede3db6eee57369001a 379 Gene3D G3DSA:1.10.540.10 1 121 8.9E-33 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_4619 37c830e3ebc6bede3db6eee57369001a 379 Gene3D G3DSA:2.40.110.10 123 234 7.4E-40 T 12-10-2018 PA257_4619 37c830e3ebc6bede3db6eee57369001a 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_4619 37c830e3ebc6bede3db6eee57369001a 379 Gene3D G3DSA:1.20.140.10 235 378 1.1E-44 T 12-10-2018 PA257_4619 37c830e3ebc6bede3db6eee57369001a 379 SUPERFAMILY SSF56645 5 241 1.96E-79 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_4619 37c830e3ebc6bede3db6eee57369001a 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 1.1E-29 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_4619 37c830e3ebc6bede3db6eee57369001a 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 5.4E-40 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_4619 37c830e3ebc6bede3db6eee57369001a 379 SUPERFAMILY SSF47203 229 377 1.16E-46 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 Gene3D G3DSA:1.10.3930.10 72 156 3.7E-167 T 12-10-2018 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 PIRSF PIRSF006356 1 416 4.6E-148 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 Pfam PF02274 Amidinotransferase 22 413 1.9E-118 T 12-10-2018 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 TIGRFAM TIGR01078 arcA: arginine deiminase 10 416 2.8E-178 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 Gene3D G3DSA:3.75.10.10 10 413 3.7E-167 T 12-10-2018 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 SUPERFAMILY SSF55909 7 416 1.81E-143 T 12-10-2018 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 Hamap MF_00242 Arginine deiminase [arcA]. 5 416 49.583 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 PRINTS PR01466 Bacterial arginine deiminase signature 352 369 3.6E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 PRINTS PR01466 Bacterial arginine deiminase signature 6 26 3.6E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 PRINTS PR01466 Bacterial arginine deiminase signature 157 175 3.6E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 PRINTS PR01466 Bacterial arginine deiminase signature 372 386 3.6E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 PRINTS PR01466 Bacterial arginine deiminase signature 185 200 3.6E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PA257_6522 82183a849d66c5a9efbc74505e599aa7 418 PRINTS PR01466 Bacterial arginine deiminase signature 395 413 3.6E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PA257_2849 bae2b695a35fca54f0b589454f7ddb10 435 Gene3D G3DSA:2.40.160.10 36 432 6.7E-133 T 12-10-2018 IPR023614 Porin domain superfamily PA257_2849 bae2b695a35fca54f0b589454f7ddb10 435 Pfam PF03573 outer membrane porin, OprD family 36 432 4.6E-138 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 458 1.5E-193 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 Hamap MF_00006 Argininosuccinate lyase [argH]. 8 459 43.945 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 Pfam PF00206 Lyase 12 306 1.0E-77 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 Gene3D G3DSA:1.10.40.30 368 438 7.8E-150 T 12-10-2018 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 1.9E-69 T 12-10-2018 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 1.9E-69 T 12-10-2018 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 1.9E-69 T 12-10-2018 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 1.9E-69 T 12-10-2018 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 1.9E-69 T 12-10-2018 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 1.9E-69 T 12-10-2018 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 Pfam PF14698 Argininosuccinate lyase C-terminal 369 437 7.6E-26 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 Gene3D G3DSA:1.20.200.10 113 451 7.8E-150 T 12-10-2018 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 Gene3D G3DSA:1.10.275.50 5 112 1.1E-40 T 12-10-2018 PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 1.3E-30 T 12-10-2018 IPR000362 Fumarate lyase family PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 1.3E-30 T 12-10-2018 IPR000362 Fumarate lyase family PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 1.3E-30 T 12-10-2018 IPR000362 Fumarate lyase family PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 1.3E-30 T 12-10-2018 IPR000362 Fumarate lyase family PA257_6618 d8597a2d166d4879e03e7d4aab846494 464 SUPERFAMILY SSF48557 10 461 8.64E-156 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 PA257_6595 1f07650229cdfaa0e6830621d1df8abc 501 Gene3D G3DSA:1.10.3210.10 311 501 2.7E-63 T 12-10-2018 PA257_6595 1f07650229cdfaa0e6830621d1df8abc 501 Gene3D G3DSA:3.30.420.150 117 296 4.8E-89 T 12-10-2018 PA257_6595 1f07650229cdfaa0e6830621d1df8abc 501 Gene3D G3DSA:3.30.420.40 13 304 4.8E-89 T 12-10-2018 PA257_6595 1f07650229cdfaa0e6830621d1df8abc 501 SUPERFAMILY SSF53067 12 134 1.07E-34 T 12-10-2018 PA257_6595 1f07650229cdfaa0e6830621d1df8abc 501 PIRSF PIRSF001267 2 501 1.4E-199 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 PA257_6595 1f07650229cdfaa0e6830621d1df8abc 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 307 3.2E-102 T 12-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 PA257_6595 1f07650229cdfaa0e6830621d1df8abc 501 SUPERFAMILY SSF53067 138 312 1.04E-44 T 12-10-2018 PA257_6595 1f07650229cdfaa0e6830621d1df8abc 501 Pfam PF02541 Ppx/GppA phosphatase family 32 310 6.0E-77 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 PA257_6595 1f07650229cdfaa0e6830621d1df8abc 501 SUPERFAMILY SSF109604 314 500 3.37E-50 T 12-10-2018 PA257_4226 ca75bfba21ba7e822858af72eb602804 385 Pfam PF07993 Male sterility protein 21 253 4.3E-30 T 12-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 PA257_4226 ca75bfba21ba7e822858af72eb602804 385 Gene3D G3DSA:3.40.50.720 3 352 8.3E-49 T 12-10-2018 PA257_4226 ca75bfba21ba7e822858af72eb602804 385 SUPERFAMILY SSF51735 17 364 5.23E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4474 663000ea249daa0e8e0b6fa48708ff5b 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site PA257_4474 663000ea249daa0e8e0b6fa48708ff5b 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 4.8E-88 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 PA257_4474 663000ea249daa0e8e0b6fa48708ff5b 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 17.448 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 PA257_4474 663000ea249daa0e8e0b6fa48708ff5b 296 Pfam PF01040 UbiA prenyltransferase family 19 266 3.1E-57 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 PA257_4474 663000ea249daa0e8e0b6fa48708ff5b 296 Gene3D G3DSA:1.10.357.140 13 168 1.1E-20 T 12-10-2018 PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 507 7.5E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 SUPERFAMILY SSF58104 232 540 8.5E-74 T 12-10-2018 PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 12 184 4.4E-21 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 SMART SM00304 212 264 2.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 SMART SM00304 267 317 72.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 Gene3D G3DSA:1.10.287.950 211 541 6.3E-72 T 12-10-2018 PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 8.5E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 8.5E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 8.5E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 8.5E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4548 05ccc7f5d81f44c0b8722c59f86ae121 541 SMART SM00283 279 540 3.9E-77 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_4427 44b739e91651fe3f3eb47a8405710365 280 Pfam PF16344 Domain of unknown function (DUF4974) 173 266 3.1E-8 T 12-10-2018 IPR032508 Protein FecR, C-terminal PA257_4427 44b739e91651fe3f3eb47a8405710365 280 Gene3D G3DSA:3.55.50.30 200 276 2.7E-5 T 12-10-2018 PA257_4427 44b739e91651fe3f3eb47a8405710365 280 PIRSF PIRSF018266 6 277 2.0E-74 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_4427 44b739e91651fe3f3eb47a8405710365 280 Pfam PF04773 FecR protein 68 160 4.0E-19 T 12-10-2018 IPR006860 FecR protein PA257_4427 44b739e91651fe3f3eb47a8405710365 280 Gene3D G3DSA:2.60.120.1440 61 195 2.9E-26 T 12-10-2018 PA257_6917 9dcbf858269e79dd851590c6779b5097 135 Pfam PF11743 Protein of unknown function (DUF3301) 7 100 2.2E-34 T 12-10-2018 IPR021732 Protein of unknown function DUF3301 PA257_3525 7f3247c760f8beaf9c09bba212cfbc18 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 251 1.1E-59 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_3525 7f3247c760f8beaf9c09bba212cfbc18 268 Gene3D G3DSA:3.40.190.10 120 211 1.2E-63 T 12-10-2018 PA257_3525 7f3247c760f8beaf9c09bba212cfbc18 268 SMART SM00062 32 253 2.1E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_3525 7f3247c760f8beaf9c09bba212cfbc18 268 SUPERFAMILY SSF53850 1 252 9.31E-69 T 12-10-2018 PA257_3525 7f3247c760f8beaf9c09bba212cfbc18 268 SMART SM00079 32 252 0.0063 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PA257_3525 7f3247c760f8beaf9c09bba212cfbc18 268 Gene3D G3DSA:3.40.190.10 24 246 1.2E-63 T 12-10-2018 PA257_2943 52a7c9392f0c7e74f3bc5ca1c7a81d1d 441 Gene3D G3DSA:1.10.3710.10 339 440 2.2E-37 T 12-10-2018 PA257_2943 52a7c9392f0c7e74f3bc5ca1c7a81d1d 441 Gene3D G3DSA:1.20.272.10 235 338 4.3E-42 T 12-10-2018 PA257_2943 52a7c9392f0c7e74f3bc5ca1c7a81d1d 441 Gene3D G3DSA:1.10.8.60 163 233 8.5E-12 T 12-10-2018 PA257_2943 52a7c9392f0c7e74f3bc5ca1c7a81d1d 441 SUPERFAMILY SSF48019 245 427 5.95E-75 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PA257_2943 52a7c9392f0c7e74f3bc5ca1c7a81d1d 441 Pfam PF16193 AAA C-terminal domain 184 260 2.0E-20 T 12-10-2018 IPR032423 AAA C-terminal domain PA257_2943 52a7c9392f0c7e74f3bc5ca1c7a81d1d 441 Pfam PF12002 MgsA AAA+ ATPase C terminal 261 427 1.3E-67 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal PA257_2943 52a7c9392f0c7e74f3bc5ca1c7a81d1d 441 SUPERFAMILY SSF52540 8 234 1.38E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2943 52a7c9392f0c7e74f3bc5ca1c7a81d1d 441 SMART SM00382 46 163 4.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2943 52a7c9392f0c7e74f3bc5ca1c7a81d1d 441 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 142 1.3E-15 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PA257_2943 52a7c9392f0c7e74f3bc5ca1c7a81d1d 441 Gene3D G3DSA:3.40.50.300 3 162 4.0E-45 T 12-10-2018 PA257_1712 2eda64d25e255a292cae842a27fc5400 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 1.9E-51 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PA257_1712 2eda64d25e255a292cae842a27fc5400 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 295 6.2E-147 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 PA257_1712 2eda64d25e255a292cae842a27fc5400 298 PIRSF PIRSF000103 1 297 2.9E-79 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_1712 2eda64d25e255a292cae842a27fc5400 298 SUPERFAMILY SSF48179 163 296 1.7E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_1712 2eda64d25e255a292cae842a27fc5400 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_1712 2eda64d25e255a292cae842a27fc5400 298 Gene3D G3DSA:3.40.50.720 1 164 1.4E-56 T 12-10-2018 PA257_1712 2eda64d25e255a292cae842a27fc5400 298 SUPERFAMILY SSF51735 2 163 1.04E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1712 2eda64d25e255a292cae842a27fc5400 298 Gene3D G3DSA:1.10.1040.10 165 298 9.9E-44 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_1712 2eda64d25e255a292cae842a27fc5400 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 294 6.2E-36 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PA257_1510 5abcf013a0f47f78152817bc7a9ab234 301 Gene3D G3DSA:1.10.10.10 3 87 4.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1510 5abcf013a0f47f78152817bc7a9ab234 301 SUPERFAMILY SSF46785 1 111 8.77E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1510 5abcf013a0f47f78152817bc7a9ab234 301 SUPERFAMILY SSF53850 91 288 5.12E-37 T 12-10-2018 PA257_1510 5abcf013a0f47f78152817bc7a9ab234 301 Pfam PF03466 LysR substrate binding domain 91 285 3.2E-36 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1510 5abcf013a0f47f78152817bc7a9ab234 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.0E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1510 5abcf013a0f47f78152817bc7a9ab234 301 Gene3D G3DSA:3.40.190.290 91 285 8.6E-36 T 12-10-2018 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 SMART SM01358 37 292 7.6E-35 T 12-10-2018 IPR032255 Helical bimodular sensor domain PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 512 541 1.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 1.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 483 510 1.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 Pfam PF16591 Helical bimodular sensor domain 47 286 2.5E-41 T 12-10-2018 IPR032255 Helical bimodular sensor domain PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 SUPERFAMILY SSF58104 343 647 1.19E-78 T 12-10-2018 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 SMART SM00283 385 646 1.1E-84 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 Pfam PF00672 HAMP domain 314 367 4.4E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 613 6.5E-46 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 Gene3D G3DSA:1.20.1440.210 130 249 4.7E-36 T 12-10-2018 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 SMART SM00304 377 423 21.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 SMART SM00304 314 370 8.7E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_6364 0862dfc45aa21b4aa48ce28ac38a78ae 647 Gene3D G3DSA:1.10.287.950 313 647 1.1E-80 T 12-10-2018 PA257_6084 57a1262c1b5e969c200c710e3cb9b9ca 813 Gene3D G3DSA:2.40.40.20 635 813 8.2E-73 T 12-10-2018 PA257_6084 57a1262c1b5e969c200c710e3cb9b9ca 813 SUPERFAMILY SSF53706 1 645 3.93E-231 T 12-10-2018 PA257_6084 57a1262c1b5e969c200c710e3cb9b9ca 813 Gene3D G3DSA:3.40.228.10 553 634 1.2E-25 T 12-10-2018 PA257_6084 57a1262c1b5e969c200c710e3cb9b9ca 813 SUPERFAMILY SSF50692 624 813 2.49E-44 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PA257_6084 57a1262c1b5e969c200c710e3cb9b9ca 813 Pfam PF01568 Molydopterin dinucleotide binding domain 690 806 1.7E-15 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PA257_6084 57a1262c1b5e969c200c710e3cb9b9ca 813 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 812 0.0 T 12-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 PA257_6084 57a1262c1b5e969c200c710e3cb9b9ca 813 Gene3D G3DSA:3.40.228.10 1 278 6.8E-73 T 12-10-2018 PA257_6084 57a1262c1b5e969c200c710e3cb9b9ca 813 Gene3D G3DSA:3.40.50.740 293 476 2.1E-60 T 12-10-2018 PA257_6084 57a1262c1b5e969c200c710e3cb9b9ca 813 Pfam PF00384 Molybdopterin oxidoreductase 2 382 1.1E-19 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2163 1dd37db6e431af269a09737f11ed3249 180 Gene3D G3DSA:1.10.10.60 1 48 2.1E-23 T 12-10-2018 PA257_2163 1dd37db6e431af269a09737f11ed3249 180 SUPERFAMILY SSF46689 1 70 3.54E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2163 1dd37db6e431af269a09737f11ed3249 180 Gene3D G3DSA:1.10.357.10 49 180 2.3E-33 T 12-10-2018 PA257_2163 1dd37db6e431af269a09737f11ed3249 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2163 1dd37db6e431af269a09737f11ed3249 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2163 1dd37db6e431af269a09737f11ed3249 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 5.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2163 1dd37db6e431af269a09737f11ed3249 180 SUPERFAMILY SSF48498 78 179 1.25E-25 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_4015 b3fa689c51c0b18fa558cb1c0b2fc50b 408 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 48 394 2.2E-115 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 PA257_4015 b3fa689c51c0b18fa558cb1c0b2fc50b 408 Gene3D G3DSA:3.60.120.10 13 400 1.6E-155 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_4015 b3fa689c51c0b18fa558cb1c0b2fc50b 408 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 93 6.0E-14 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4015 b3fa689c51c0b18fa558cb1c0b2fc50b 408 Pfam PF00425 chorismate binding enzyme 137 390 4.4E-99 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PA257_4015 b3fa689c51c0b18fa558cb1c0b2fc50b 408 PRINTS PR00095 Anthranilate synthase component I signature 238 251 2.3E-16 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4015 b3fa689c51c0b18fa558cb1c0b2fc50b 408 PRINTS PR00095 Anthranilate synthase component I signature 347 361 2.3E-16 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4015 b3fa689c51c0b18fa558cb1c0b2fc50b 408 PRINTS PR00095 Anthranilate synthase component I signature 252 265 2.3E-16 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4015 b3fa689c51c0b18fa558cb1c0b2fc50b 408 PRINTS PR00095 Anthranilate synthase component I signature 332 346 2.3E-16 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4015 b3fa689c51c0b18fa558cb1c0b2fc50b 408 SUPERFAMILY SSF56322 23 399 3.01E-137 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 230 7.2E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 SUPERFAMILY SSF75516 4 166 9.15E-42 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 Pfam PF03472 Autoinducer binding domain 17 158 1.4E-36 T 12-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 SMART SM00421 173 230 4.5E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 Gene3D G3DSA:1.10.10.10 168 237 1.8E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 ProSitePatterns PS00622 LuxR-type HTH domain signature. 190 217 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 1.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 1.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 1.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 Gene3D G3DSA:3.30.450.80 1 167 1.9E-67 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PA257_3849 ab8dc1323babb8ceb15c19dd85c609b1 237 SUPERFAMILY SSF46894 163 236 2.48E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_1336 647ecd098a31f067575f6ebdd04958ac 242 Pfam PF07883 Cupin domain 5 65 2.0E-6 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_1336 647ecd098a31f067575f6ebdd04958ac 242 SUPERFAMILY SSF46689 190 235 1.16E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1336 647ecd098a31f067575f6ebdd04958ac 242 Pfam PF12833 Helix-turn-helix domain 160 236 5.0E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1336 647ecd098a31f067575f6ebdd04958ac 242 SUPERFAMILY SSF51182 4 191 3.67E-23 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_1336 647ecd098a31f067575f6ebdd04958ac 242 Gene3D G3DSA:1.10.10.60 138 240 2.2E-21 T 12-10-2018 PA257_1336 647ecd098a31f067575f6ebdd04958ac 242 SMART SM00342 154 236 5.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1336 647ecd098a31f067575f6ebdd04958ac 242 Gene3D G3DSA:2.60.120.10 1 71 1.1E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1336 647ecd098a31f067575f6ebdd04958ac 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 205 220 6.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_1336 647ecd098a31f067575f6ebdd04958ac 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 236 6.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_1336 647ecd098a31f067575f6ebdd04958ac 242 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 191 232 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_2543 5a624300c274ae636c6fb51b131d816a 147 SUPERFAMILY SSF51316 7 142 3.98E-58 T 12-10-2018 IPR011057 Mss4-like superfamily PA257_2543 5a624300c274ae636c6fb51b131d816a 147 Pfam PF01641 SelR domain 11 127 2.0E-49 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PA257_2543 5a624300c274ae636c6fb51b131d816a 147 Gene3D G3DSA:2.170.150.20 1 146 1.6E-58 T 12-10-2018 PA257_2543 5a624300c274ae636c6fb51b131d816a 147 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 1 129 36.953 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PA257_2543 5a624300c274ae636c6fb51b131d816a 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 11 137 1.5E-58 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PA257_4318 2d1127d86759c50c8778dd454dd89053 223 PIRSF PIRSF002764 1 222 5.5E-81 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PA257_4318 2d1127d86759c50c8778dd454dd89053 223 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.5E-86 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PA257_4318 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.9E-70 T 12-10-2018 PA257_4318 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 134 157 5.9E-70 T 12-10-2018 PA257_4318 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.9E-70 T 12-10-2018 PA257_4318 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.9E-70 T 12-10-2018 PA257_4318 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.9E-70 T 12-10-2018 PA257_4318 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.9E-70 T 12-10-2018 PA257_4318 2d1127d86759c50c8778dd454dd89053 223 Pfam PF03379 CcmB protein 6 219 9.6E-84 T 12-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_2529 fa63d50503c3fd9514aa072c1b51a8c3 510 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 21 495 43.212 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 PA257_2529 fa63d50503c3fd9514aa072c1b51a8c3 510 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 24 479 2.3E-114 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 PA257_3944 15e20d225b9b340a40edcb9f2f8feb95 141 SUPERFAMILY SSF53098 1 136 2.53E-57 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_3944 15e20d225b9b340a40edcb9f2f8feb95 141 Pfam PF00075 RNase H 1 136 1.2E-50 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 PA257_3944 15e20d225b9b340a40edcb9f2f8feb95 141 Gene3D G3DSA:3.30.420.10 1 140 7.4E-61 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_3944 15e20d225b9b340a40edcb9f2f8feb95 141 Hamap MF_00042 Ribonuclease H [rnhA]. 1 141 31.312 T 12-10-2018 IPR022892 Ribonuclease HI GO:0004523 PA257_4245 183bfb13e0687f924952352a4dc5e115 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 8 177 35.233 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 PA257_4245 183bfb13e0687f924952352a4dc5e115 182 Gene3D G3DSA:3.40.50.2020 4 178 1.2E-57 T 12-10-2018 PA257_4245 183bfb13e0687f924952352a4dc5e115 182 SUPERFAMILY SSF53271 5 177 6.03E-49 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like PA257_4245 183bfb13e0687f924952352a4dc5e115 182 Pfam PF00156 Phosphoribosyl transferase domain 48 157 1.4E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PA257_4245 183bfb13e0687f924952352a4dc5e115 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 8 175 1.1E-58 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 PA257_3886 c6a59b0cee9031cf7872bc02f76a11b2 549 Pfam PF08774 VRR-NUC domain 433 545 4.6E-33 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 PA257_3886 c6a59b0cee9031cf7872bc02f76a11b2 549 SMART SM00990 431 545 2.9E-49 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 PA257_3886 c6a59b0cee9031cf7872bc02f76a11b2 549 Gene3D G3DSA:3.40.1350.10 476 549 1.4E-7 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 PA257_5006 a969ca5a4392071b9aed2d7c7ec4a55a 730 Gene3D G3DSA:3.40.720.10 42 200 9.3E-32 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_5006 a969ca5a4392071b9aed2d7c7ec4a55a 730 Gene3D G3DSA:3.40.720.10 301 485 1.5E-42 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_5006 a969ca5a4392071b9aed2d7c7ec4a55a 730 Pfam PF05506 Domain of unknown function (DUF756) 512 619 2.7E-14 T 12-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 PA257_5006 a969ca5a4392071b9aed2d7c7ec4a55a 730 Pfam PF05506 Domain of unknown function (DUF756) 629 712 1.2E-17 T 12-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 PA257_5006 a969ca5a4392071b9aed2d7c7ec4a55a 730 Pfam PF04185 Phosphoesterase family 51 436 6.6E-125 T 12-10-2018 IPR007312 Phosphoesterase GO:0016788 PA257_5006 a969ca5a4392071b9aed2d7c7ec4a55a 730 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 8 725 2.5E-273 T 12-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 PA257_2956 d6ba28f06de4da46cfcf983b701104a9 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.9E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2956 d6ba28f06de4da46cfcf983b701104a9 298 Pfam PF03466 LysR substrate binding domain 87 274 1.9E-37 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2956 d6ba28f06de4da46cfcf983b701104a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2956 d6ba28f06de4da46cfcf983b701104a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2956 d6ba28f06de4da46cfcf983b701104a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2956 d6ba28f06de4da46cfcf983b701104a9 298 Gene3D G3DSA:1.10.10.10 1 86 1.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2956 d6ba28f06de4da46cfcf983b701104a9 298 Gene3D G3DSA:3.40.190.10 166 266 1.5E-27 T 12-10-2018 PA257_2956 d6ba28f06de4da46cfcf983b701104a9 298 SUPERFAMILY SSF46785 1 110 8.44E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2956 d6ba28f06de4da46cfcf983b701104a9 298 SUPERFAMILY SSF53850 87 273 3.44E-31 T 12-10-2018 PA257_2956 d6ba28f06de4da46cfcf983b701104a9 298 Gene3D G3DSA:3.40.190.10 90 272 1.5E-27 T 12-10-2018 PA257_4821 a7164cc8db2817771ad3444e1a09d72c 477 Gene3D G3DSA:3.30.2010.10 56 141 1.3E-6 T 12-10-2018 PA257_4821 a7164cc8db2817771ad3444e1a09d72c 477 Pfam PF01435 Peptidase family M48 67 250 5.0E-32 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PA257_4821 a7164cc8db2817771ad3444e1a09d72c 477 Pfam PF14559 Tetratricopeptide repeat 281 336 3.9E-6 T 12-10-2018 PA257_4821 a7164cc8db2817771ad3444e1a09d72c 477 SUPERFAMILY SSF48452 284 447 2.67E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4821 a7164cc8db2817771ad3444e1a09d72c 477 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 475 36.751 T 12-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 PA257_4821 a7164cc8db2817771ad3444e1a09d72c 477 Gene3D G3DSA:1.25.40.10 249 471 1.4E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_3664 410026703b88e2de2d8be90864d855a8 574 SUPERFAMILY SSF53067 13 340 6.69E-15 T 12-10-2018 PA257_3664 410026703b88e2de2d8be90864d855a8 574 Pfam PF16861 Carbamoyltransferase C-terminus 390 559 5.1E-53 T 12-10-2018 IPR031730 Carbamoyltransferase, C-terminal PA257_3664 410026703b88e2de2d8be90864d855a8 574 Pfam PF02543 Carbamoyltransferase N-terminus 4 337 9.1E-51 T 12-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 PA257_3664 410026703b88e2de2d8be90864d855a8 574 Gene3D G3DSA:3.90.870.20 352 560 1.3E-59 T 12-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily PA257_3664 410026703b88e2de2d8be90864d855a8 574 Gene3D G3DSA:3.30.420.350 132 330 3.3E-75 T 12-10-2018 PA257_3664 410026703b88e2de2d8be90864d855a8 574 Gene3D G3DSA:3.30.420.40 13 337 3.3E-75 T 12-10-2018 PA257_4725 cfddddf455b960052a575f682233245c 382 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 206 333 4.6E-25 T 12-10-2018 IPR006342 Methyltransferase FkbM PA257_4725 cfddddf455b960052a575f682233245c 382 Pfam PF05050 Methyltransferase FkbM domain 208 331 2.6E-15 T 12-10-2018 IPR006342 Methyltransferase FkbM PA257_4725 cfddddf455b960052a575f682233245c 382 SUPERFAMILY SSF53335 53 371 5.54E-58 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_4725 cfddddf455b960052a575f682233245c 382 Gene3D G3DSA:3.40.50.150 193 373 7.1E-43 T 12-10-2018 PA257_0302 e5d1ec6111ba63cef0be4b3ea10830c9 250 Pfam PF07690 Major Facilitator Superfamily 87 239 3.1E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0302 e5d1ec6111ba63cef0be4b3ea10830c9 250 SUPERFAMILY SSF103473 2 242 5.75E-30 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0302 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 105 125 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_0302 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 223 242 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_0302 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 18 38 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_0302 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 76 93 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_0302 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 133 154 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_0302 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 158 178 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_0302 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 193 216 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_0302 e5d1ec6111ba63cef0be4b3ea10830c9 250 Gene3D G3DSA:1.20.1250.20 1 243 2.3E-26 T 12-10-2018 PA257_5250 e5d1ec6111ba63cef0be4b3ea10830c9 250 Pfam PF07690 Major Facilitator Superfamily 87 239 3.1E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_5250 e5d1ec6111ba63cef0be4b3ea10830c9 250 SUPERFAMILY SSF103473 2 242 5.75E-30 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_5250 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 105 125 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_5250 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 223 242 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_5250 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 18 38 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_5250 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 76 93 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_5250 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 133 154 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_5250 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 158 178 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_5250 e5d1ec6111ba63cef0be4b3ea10830c9 250 PRINTS PR01035 Tetracycline resistance protein signature 193 216 8.3E-84 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_5250 e5d1ec6111ba63cef0be4b3ea10830c9 250 Gene3D G3DSA:1.20.1250.20 1 243 2.3E-26 T 12-10-2018 PA257_5529 29be98c92fe47efa1a9a02e79eb01bb8 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_5529 29be98c92fe47efa1a9a02e79eb01bb8 241 Pfam PF00005 ABC transporter 20 166 3.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_5529 29be98c92fe47efa1a9a02e79eb01bb8 241 Gene3D G3DSA:3.40.50.300 2 241 3.6E-66 T 12-10-2018 PA257_5529 29be98c92fe47efa1a9a02e79eb01bb8 241 SUPERFAMILY SSF52540 4 235 1.93E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5529 29be98c92fe47efa1a9a02e79eb01bb8 241 SMART SM00382 28 213 6.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5529 29be98c92fe47efa1a9a02e79eb01bb8 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 3.5E-122 T 12-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 PA257_5529 29be98c92fe47efa1a9a02e79eb01bb8 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 6.3E-5 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 SUPERFAMILY SSF52210 292 454 8.61E-22 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 SUPERFAMILY SSF52210 129 286 2.88E-32 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 Pfam PF13549 ATP-grasp domain 478 693 2.2E-51 T 12-10-2018 PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 Gene3D G3DSA:3.30.470.20 481 691 2.5E-60 T 12-10-2018 PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 285 6.7E-34 T 12-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 Gene3D G3DSA:3.40.50.261 290 460 1.2E-16 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 SUPERFAMILY SSF51735 6 127 5.52E-23 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 Gene3D G3DSA:3.40.50.261 141 288 1.3E-33 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 SUPERFAMILY SSF56059 481 692 1.0E-30 T 12-10-2018 PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 SMART SM00881 9 99 1.5E-18 T 12-10-2018 IPR003781 CoA-binding GO:0048037 PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 Gene3D G3DSA:3.30.1490.20 499 575 2.5E-60 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 Gene3D G3DSA:3.40.50.720 3 126 2.5E-25 T 12-10-2018 PA257_6263 fe824c0ef7bdbcb7a3e84034ac534c7a 696 Pfam PF13380 CoA binding domain 25 130 3.4E-12 T 12-10-2018 IPR003781 CoA-binding GO:0048037 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 Pfam PF00579 tRNA synthetases class I (W and Y) 36 325 1.4E-66 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 409 6.0E-97 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 8 410 40.346 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 SUPERFAMILY SSF55174 306 409 1.57E-9 T 12-10-2018 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 1.3E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 1.3E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 50 72 1.3E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 1.3E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 Gene3D G3DSA:3.40.50.620 2 226 4.6E-80 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 Gene3D G3DSA:1.10.240.10 227 328 2.1E-28 T 12-10-2018 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 Gene3D G3DSA:3.10.290.10 329 409 2.7E-8 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PA257_0959 891cd2d9252b43dd74d608afd0d38f99 412 SUPERFAMILY SSF52374 9 322 1.93E-87 T 12-10-2018 PA257_6816 c7f9863475490f33f9b117bbffa7a3b0 399 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PA257_6816 c7f9863475490f33f9b117bbffa7a3b0 399 SUPERFAMILY SSF50129 4 187 2.6E-64 T 12-10-2018 IPR011032 GroES-like superfamily PA257_6816 c7f9863475490f33f9b117bbffa7a3b0 399 Pfam PF00107 Zinc-binding dehydrogenase 197 265 2.3E-9 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_6816 c7f9863475490f33f9b117bbffa7a3b0 399 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 144 1.7E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_6816 c7f9863475490f33f9b117bbffa7a3b0 399 SUPERFAMILY SSF51735 162 356 1.49E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6816 c7f9863475490f33f9b117bbffa7a3b0 399 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 2 395 6.9E-229 T 12-10-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 PA257_6816 c7f9863475490f33f9b117bbffa7a3b0 399 Gene3D G3DSA:3.40.50.720 178 344 1.2E-148 T 12-10-2018 PA257_6816 c7f9863475490f33f9b117bbffa7a3b0 399 Gene3D G3DSA:3.90.180.10 11 381 1.2E-148 T 12-10-2018 PA257_6435 502654a1531a733cfcde290c6b20c601 245 Gene3D G3DSA:3.20.20.70 1 241 3.1E-85 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_6435 502654a1531a733cfcde290c6b20c601 245 SUPERFAMILY SSF51366 1 239 2.28E-75 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PA257_6435 502654a1531a733cfcde290c6b20c601 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 35.569 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 PA257_6435 502654a1531a733cfcde290c6b20c601 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 3.3E-77 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 PA257_6435 502654a1531a733cfcde290c6b20c601 245 Pfam PF00977 Histidine biosynthesis protein 3 231 1.3E-77 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 PA257_2864 a4f1b32f248e114ac66a8a469efd9e6a 238 Gene3D G3DSA:1.10.10.10 130 237 2.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2864 a4f1b32f248e114ac66a8a469efd9e6a 238 Pfam PF00072 Response regulator receiver domain 14 120 1.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2864 a4f1b32f248e114ac66a8a469efd9e6a 238 SUPERFAMILY SSF52172 10 190 3.13E-36 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2864 a4f1b32f248e114ac66a8a469efd9e6a 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 232 6.1E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_2864 a4f1b32f248e114ac66a8a469efd9e6a 238 Gene3D G3DSA:3.40.50.2300 3 129 8.8E-33 T 12-10-2018 PA257_2864 a4f1b32f248e114ac66a8a469efd9e6a 238 SMART SM00862 156 232 2.1E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_2864 a4f1b32f248e114ac66a8a469efd9e6a 238 SMART SM00448 11 121 3.4E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4535 b080188ac0d21dde4e3dfb63aa1bc53e 288 Gene3D G3DSA:3.40.190.10 97 264 2.4E-40 T 12-10-2018 PA257_4535 b080188ac0d21dde4e3dfb63aa1bc53e 288 Gene3D G3DSA:3.40.190.10 167 260 2.4E-40 T 12-10-2018 PA257_4535 b080188ac0d21dde4e3dfb63aa1bc53e 288 SUPERFAMILY SSF46785 3 84 2.43E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4535 b080188ac0d21dde4e3dfb63aa1bc53e 288 Gene3D G3DSA:1.10.10.10 1 86 4.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4535 b080188ac0d21dde4e3dfb63aa1bc53e 288 Pfam PF03466 LysR substrate binding domain 94 286 6.8E-22 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4535 b080188ac0d21dde4e3dfb63aa1bc53e 288 SUPERFAMILY SSF53850 94 287 1.27E-21 T 12-10-2018 PA257_4535 b080188ac0d21dde4e3dfb63aa1bc53e 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 PRINTS PR00397 Sirohaem Fe-binding site signature 412 430 9.0E-5 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 PRINTS PR00397 Sirohaem Fe-binding site signature 458 476 9.0E-5 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 Gene3D G3DSA:3.30.413.10 410 557 1.9E-32 T 12-10-2018 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 9.0E-39 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 49 109 2.9E-18 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 347 398 4.4E-16 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 SUPERFAMILY SSF55124 1 126 4.58E-31 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 SUPERFAMILY SSF56014 120 286 2.49E-46 T 12-10-2018 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 SUPERFAMILY SSF55124 253 423 5.89E-28 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 SUPERFAMILY SSF56014 409 554 2.49E-41 T 12-10-2018 PA257_0969 a28a004fd8ba6f8ac80599ed76e958fb 557 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 415 555 3.0E-12 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_2339 bf67608ca7d265aa4d65a517423f7750 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_2339 bf67608ca7d265aa4d65a517423f7750 78 SUPERFAMILY SSF47336 2 77 3.14E-24 T 12-10-2018 IPR036736 ACP-like superfamily PA257_2339 bf67608ca7d265aa4d65a517423f7750 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 8.9E-37 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PA257_2339 bf67608ca7d265aa4d65a517423f7750 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.7E-17 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_2339 bf67608ca7d265aa4d65a517423f7750 78 SMART SM00823 Phosphopantetheine attachment site 5 77 0.0084 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_2339 bf67608ca7d265aa4d65a517423f7750 78 Gene3D G3DSA:1.10.1200.10 1 78 3.3E-30 T 12-10-2018 IPR036736 ACP-like superfamily PA257_2339 bf67608ca7d265aa4d65a517423f7750 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.547 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PA257_2339 bf67608ca7d265aa4d65a517423f7750 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 9.0E-13 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PA257_2946 0291c53d83cfa6ff1278ab185f806d36 324 Gene3D G3DSA:1.20.1050.10 168 320 1.7E-68 T 12-10-2018 PA257_2946 0291c53d83cfa6ff1278ab185f806d36 324 Pfam PF13410 Glutathione S-transferase, C-terminal domain 193 264 1.3E-13 T 12-10-2018 PA257_2946 0291c53d83cfa6ff1278ab185f806d36 324 Pfam PF13409 Glutathione S-transferase, N-terminal domain 52 147 7.2E-22 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_2946 0291c53d83cfa6ff1278ab185f806d36 324 Gene3D G3DSA:3.40.30.130 1 163 1.4E-65 T 12-10-2018 PA257_2946 0291c53d83cfa6ff1278ab185f806d36 324 PIRSF PIRSF015753 3 313 2.4E-130 T 12-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 PA257_2946 0291c53d83cfa6ff1278ab185f806d36 324 SUPERFAMILY SSF52833 35 151 3.7E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2946 0291c53d83cfa6ff1278ab185f806d36 324 SUPERFAMILY SSF47616 168 314 5.01E-37 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_2061 91264fa1e0ce4773b3b01232099adec6 88 Pfam PF10976 Protein of unknown function (DUF2790) 11 85 3.6E-26 T 12-10-2018 IPR021245 Protein of unknown function DUF2790 PA257_2061 91264fa1e0ce4773b3b01232099adec6 88 Gene3D G3DSA:2.30.140.50 20 88 8.9E-36 T 12-10-2018 PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 Gene3D G3DSA:3.40.190.10 160 263 1.3E-51 T 12-10-2018 PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 Pfam PF03466 LysR substrate binding domain 88 294 1.9E-37 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.2E-24 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 Gene3D G3DSA:1.10.10.10 3 93 6.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.8E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.8E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.8E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 TIGRFAM TIGR03418 chol_sulf_TF: putative choline sulfate-utilization transcription factor 3 293 7.4E-140 T 12-10-2018 IPR017786 Transcription factor, choline sulphate-utilisation, putative PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 Gene3D G3DSA:3.40.190.10 100 290 1.3E-51 T 12-10-2018 PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 SUPERFAMILY SSF46785 2 81 9.58E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0041 bba61caa9b474b42daf532ef6234ddf1 299 SUPERFAMILY SSF53850 92 295 2.53E-36 T 12-10-2018 PA257_1570 d2d4098df539ee5d43544772f6844f96 271 Pfam PF01148 Cytidylyltransferase family 3 264 2.6E-66 T 12-10-2018 PA257_1570 d2d4098df539ee5d43544772f6844f96 271 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 PA257_4508 13f0f8510d9e62daac7adad7e0168a40 197 SUPERFAMILY SSF46689 5 86 2.99E-22 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4508 13f0f8510d9e62daac7adad7e0168a40 197 Gene3D G3DSA:1.10.357.10 3 195 5.4E-39 T 12-10-2018 PA257_4508 13f0f8510d9e62daac7adad7e0168a40 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4508 13f0f8510d9e62daac7adad7e0168a40 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 5.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4508 13f0f8510d9e62daac7adad7e0168a40 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 4.0E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4508 13f0f8510d9e62daac7adad7e0168a40 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_0141 f953bebe10f6b893a31cdba995f1760e 195 SUPERFAMILY SSF52833 1 194 5.31E-48 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_0141 f953bebe10f6b893a31cdba995f1760e 195 PIRSF PIRSF006386 1 195 6.5E-68 T 12-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 PA257_0141 f953bebe10f6b893a31cdba995f1760e 195 Gene3D G3DSA:3.40.30.10 4 195 2.3E-68 T 12-10-2018 PA257_0141 f953bebe10f6b893a31cdba995f1760e 195 Pfam PF01323 DSBA-like thioredoxin domain 4 194 3.6E-45 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 PA257_2182 c53d4ab4d842854d173d0c59077967fd 285 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 18 261 34.62 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2182 c53d4ab4d842854d173d0c59077967fd 285 PIRSF PIRSF001430 17 277 5.9E-74 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2182 c53d4ab4d842854d173d0c59077967fd 285 Pfam PF01416 tRNA pseudouridine synthase 25 120 1.1E-5 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2182 c53d4ab4d842854d173d0c59077967fd 285 Pfam PF01416 tRNA pseudouridine synthase 160 262 1.9E-31 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2182 c53d4ab4d842854d173d0c59077967fd 285 Gene3D G3DSA:3.30.70.660 123 260 8.6E-50 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 PA257_2182 c53d4ab4d842854d173d0c59077967fd 285 Gene3D G3DSA:3.30.70.580 15 122 8.0E-37 T 12-10-2018 PA257_2182 c53d4ab4d842854d173d0c59077967fd 285 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 19 256 1.5E-66 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2182 c53d4ab4d842854d173d0c59077967fd 285 SUPERFAMILY SSF55120 18 275 4.32E-91 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_1062 f65e37381ce4e9e5956cbb87b6ff904c 198 Gene3D G3DSA:2.60.40.1090 42 197 8.8E-25 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 PA257_1062 f65e37381ce4e9e5956cbb87b6ff904c 198 SUPERFAMILY SSF49401 42 198 1.74E-18 T 12-10-2018 IPR008966 Adhesion domain superfamily PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.095 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 Gene3D G3DSA:3.90.930.12 83 177 1.2E-40 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 PIRSF PIRSF002162 1 177 1.8E-46 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 Pfam PF00347 Ribosomal protein L6 90 164 8.0E-19 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 Pfam PF00347 Ribosomal protein L6 12 82 2.5E-16 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 7.3E-76 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 SUPERFAMILY SSF56053 1 82 1.12E-22 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 SUPERFAMILY SSF56053 83 177 3.17E-36 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0847 498ad56a7234b8f83975d6c9b437e371 177 Gene3D G3DSA:3.90.930.12 1 82 6.1E-27 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 Gene3D G3DSA:1.20.210.10 30 564 1.7E-189 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 6.2E-134 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 SUPERFAMILY SSF81442 43 559 3.53E-177 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.5E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4477 0c882b8b57b5928674bb3509b15b0d2f 658 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 12-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 PA257_0703 829bfb87cb60de57f4c783025b34dba3 162 Pfam PF01863 Protein of unknown function DUF45 93 154 1.1E-12 T 12-10-2018 IPR002725 Protein of unknown function DUF45 PA257_0703 829bfb87cb60de57f4c783025b34dba3 162 Gene3D G3DSA:3.30.2010.10 66 161 2.3E-7 T 12-10-2018 PA257_5748 e8aa95870f619f79f1c83e5da5a3e681 205 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 202 3.6E-26 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PA257_5748 e8aa95870f619f79f1c83e5da5a3e681 205 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 4 108 2.9E-24 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PA257_5748 e8aa95870f619f79f1c83e5da5a3e681 205 Gene3D G3DSA:1.10.287.460 5 68 1.4E-16 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 PA257_5748 e8aa95870f619f79f1c83e5da5a3e681 205 SUPERFAMILY SSF54534 7 204 2.95E-55 T 12-10-2018 PA257_5748 e8aa95870f619f79f1c83e5da5a3e681 205 Gene3D G3DSA:3.10.50.40 69 205 1.7E-48 T 12-10-2018 PA257_4021 80575ee234200efaddd5d024b43d1167 165 Pfam PF00582 Universal stress protein family 1 156 4.9E-26 T 12-10-2018 IPR006016 UspA PA257_4021 80575ee234200efaddd5d024b43d1167 165 SUPERFAMILY SSF52402 1 156 2.93E-26 T 12-10-2018 PA257_4021 80575ee234200efaddd5d024b43d1167 165 PRINTS PR01438 Universal stress protein signature 134 156 7.1E-5 T 12-10-2018 IPR006015 Universal stress protein A PA257_4021 80575ee234200efaddd5d024b43d1167 165 PRINTS PR01438 Universal stress protein signature 2 20 7.1E-5 T 12-10-2018 IPR006015 Universal stress protein A PA257_4021 80575ee234200efaddd5d024b43d1167 165 PRINTS PR01438 Universal stress protein signature 116 128 7.1E-5 T 12-10-2018 IPR006015 Universal stress protein A PA257_4021 80575ee234200efaddd5d024b43d1167 165 Gene3D G3DSA:3.40.50.620 1 157 6.9E-27 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1591 fb8c92106719f2ac292a8d4f136cd572 302 Gene3D G3DSA:3.40.190.10 163 259 2.8E-66 T 12-10-2018 PA257_1591 fb8c92106719f2ac292a8d4f136cd572 302 Pfam PF03466 LysR substrate binding domain 88 288 1.2E-48 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1591 fb8c92106719f2ac292a8d4f136cd572 302 SUPERFAMILY SSF53850 89 291 1.32E-48 T 12-10-2018 PA257_1591 fb8c92106719f2ac292a8d4f136cd572 302 SUPERFAMILY SSF46785 4 111 1.28E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1591 fb8c92106719f2ac292a8d4f136cd572 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.2E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1591 fb8c92106719f2ac292a8d4f136cd572 302 Gene3D G3DSA:1.10.10.10 3 91 2.5E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1591 fb8c92106719f2ac292a8d4f136cd572 302 Gene3D G3DSA:3.40.190.10 92 286 2.8E-66 T 12-10-2018 PA257_6499 6b1a36acc5b4cdb990f926bd2ce7e81f 906 Pfam PF13155 Toprim-like 181 274 3.2E-12 T 12-10-2018 PA257_6499 6b1a36acc5b4cdb990f926bd2ce7e81f 906 Gene3D G3DSA:3.40.1360.10 171 288 1.3E-10 T 12-10-2018 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 401 8.3E-224 T 12-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 PIRSF PIRSF000429 1 401 4.8E-136 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 4.7E-79 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 6.9E-43 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 1.0E-138 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 SUPERFAMILY SSF53901 277 400 3.12E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 Gene3D G3DSA:3.40.47.10 142 397 3.5E-160 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 Gene3D G3DSA:3.40.47.10 7 282 3.5E-160 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 SUPERFAMILY SSF53901 4 276 4.51E-88 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_0255 9cec82d316b7c22b870c24f522b83ed0 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PA257_5552 00d0d313995711fa5b9178eec4f14326 484 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 10 475 94.273 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_5552 00d0d313995711fa5b9178eec4f14326 484 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 473 1.9E-178 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_5552 00d0d313995711fa5b9178eec4f14326 484 ProSitePatterns PS00571 Amidases signature. 150 181 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 PA257_5552 00d0d313995711fa5b9178eec4f14326 484 SUPERFAMILY SSF75304 3 481 4.71E-171 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_5552 00d0d313995711fa5b9178eec4f14326 484 Gene3D G3DSA:3.90.1300.10 1 484 9.1E-224 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_5552 00d0d313995711fa5b9178eec4f14326 484 Pfam PF01425 Amidase 23 464 2.5E-161 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_1414 4444c5f623823a68820b856d33968702 593 SUPERFAMILY SSF52467 13 246 2.94E-15 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_1414 4444c5f623823a68820b856d33968702 593 Gene3D G3DSA:3.40.50.1220 22 147 2.9E-7 T 12-10-2018 PA257_1414 4444c5f623823a68820b856d33968702 593 Gene3D G3DSA:3.30.1600.10 37 112 2.9E-7 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily PA257_1414 4444c5f623823a68820b856d33968702 593 Pfam PF13289 SIR2-like domain 131 221 7.4E-12 T 12-10-2018 IPR039444 SIR2-like domain PA257_6794 d4aea2a0a828521fc80d461abf9aa430 653 SUPERFAMILY SSF46548 222 352 2.27E-19 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_6794 d4aea2a0a828521fc80d461abf9aa430 653 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 323 334 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_6794 d4aea2a0a828521fc80d461abf9aa430 653 Pfam PF13183 4Fe-4S dicluster domain 242 336 7.6E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_6794 d4aea2a0a828521fc80d461abf9aa430 653 Pfam PF11982 Domain of unknown function (DUF3483) 4 220 1.2E-89 T 12-10-2018 IPR021872 Protein of unknown function DUF3483 PA257_6794 d4aea2a0a828521fc80d461abf9aa430 653 Pfam PF02754 Cysteine-rich domain 525 611 9.9E-14 T 12-10-2018 IPR004017 Cysteine-rich domain PA257_6794 d4aea2a0a828521fc80d461abf9aa430 653 Pfam PF02754 Cysteine-rich domain 402 481 0.0079 T 12-10-2018 IPR004017 Cysteine-rich domain PA257_6794 d4aea2a0a828521fc80d461abf9aa430 653 Gene3D G3DSA:1.10.1060.10 309 358 7.0E-6 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_0407 7cbd4afb512c78ce10bb215259e3922f 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 190 1.6E-26 T 12-10-2018 PA257_0407 7cbd4afb512c78ce10bb215259e3922f 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 201 1.2E-41 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like PA257_0407 7cbd4afb512c78ce10bb215259e3922f 217 SUPERFAMILY SSF56784 2 210 2.1E-34 T 12-10-2018 IPR036412 HAD-like superfamily PA257_0407 7cbd4afb512c78ce10bb215259e3922f 217 Gene3D G3DSA:1.20.1440.100 15 88 8.2E-74 T 12-10-2018 PA257_0407 7cbd4afb512c78ce10bb215259e3922f 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 7.1E-40 T 12-10-2018 PA257_0407 7cbd4afb512c78ce10bb215259e3922f 217 Gene3D G3DSA:3.40.50.1000 3 214 8.2E-74 T 12-10-2018 IPR023214 HAD superfamily PA257_2403 194125931fe479efdc75154f4d419d19 415 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 236 357 2.9E-35 T 12-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 PA257_2403 194125931fe479efdc75154f4d419d19 415 Gene3D G3DSA:3.40.50.150 230 405 1.9E-68 T 12-10-2018 PA257_2403 194125931fe479efdc75154f4d419d19 415 PIRSF PIRSF036428 7 407 1.2E-139 T 12-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 PA257_2403 194125931fe479efdc75154f4d419d19 415 SUPERFAMILY SSF53335 211 385 4.82E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2403 194125931fe479efdc75154f4d419d19 415 SUPERFAMILY SSF53790 10 210 3.79E-36 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PA257_2403 194125931fe479efdc75154f4d419d19 415 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 188 1.3E-16 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PA257_2403 194125931fe479efdc75154f4d419d19 415 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 13 198 4.6E-42 T 12-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 PA257_2403 194125931fe479efdc75154f4d419d19 415 Gene3D G3DSA:3.40.1010.10 10 109 4.7E-13 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PA257_6925 fab75a3adf0202da9df490a3ffaa02bf 464 Pfam PF00202 Aminotransferase class-III 50 428 7.1E-42 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_6925 fab75a3adf0202da9df490a3ffaa02bf 464 Gene3D G3DSA:3.90.1150.10 25 445 2.9E-124 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_6925 fab75a3adf0202da9df490a3ffaa02bf 464 Gene3D G3DSA:3.40.640.10 92 350 2.9E-124 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6925 fab75a3adf0202da9df490a3ffaa02bf 464 SUPERFAMILY SSF53383 45 455 1.53E-83 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_4524 94dbfcfe4ce34a36f6fc1fb9ccdfe39e 218 Pfam PF00881 Nitroreductase family 20 183 2.5E-26 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 PA257_4524 94dbfcfe4ce34a36f6fc1fb9ccdfe39e 218 SUPERFAMILY SSF55469 8 216 4.06E-47 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_4524 94dbfcfe4ce34a36f6fc1fb9ccdfe39e 218 Gene3D G3DSA:3.40.109.10 1 190 5.4E-43 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_4524 94dbfcfe4ce34a36f6fc1fb9ccdfe39e 218 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 8 209 3.0E-73 T 12-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 PA257_5209 8bb00ac096bbdd824be533f74ff2b648 192 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 54 157 1.7E-42 T 12-10-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 PA257_4594 c8f9628fb18d6ef318d0f8480136775f 409 SUPERFAMILY SSF103473 18 395 2.22E-49 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4594 c8f9628fb18d6ef318d0f8480136775f 409 Gene3D G3DSA:1.20.1250.20 16 396 4.6E-43 T 12-10-2018 PA257_4594 c8f9628fb18d6ef318d0f8480136775f 409 Pfam PF07690 Major Facilitator Superfamily 22 356 7.9E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4594 c8f9628fb18d6ef318d0f8480136775f 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_5301 1ad0b66bedab07765eb060528a96a1de 328 Gene3D G3DSA:1.10.10.10 32 114 9.6E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5301 1ad0b66bedab07765eb060528a96a1de 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 36 92 1.5E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5301 1ad0b66bedab07765eb060528a96a1de 328 SUPERFAMILY SSF46785 33 112 1.02E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5301 1ad0b66bedab07765eb060528a96a1de 328 Gene3D G3DSA:3.40.190.290 117 318 6.2E-6 T 12-10-2018 PA257_5301 1ad0b66bedab07765eb060528a96a1de 328 SUPERFAMILY SSF53850 116 322 2.17E-10 T 12-10-2018 PA257_5301 1ad0b66bedab07765eb060528a96a1de 328 Pfam PF03466 LysR substrate binding domain 198 318 4.8E-7 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1621 550981ce86f8a4249dd807953ff654d5 120 Pfam PF16085 Bacteriophage holin Hol, superfamily III 5 107 1.7E-31 T 12-10-2018 IPR032128 Pyocin R2, holin PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 SMART SM00382 223 368 1.2E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 SUPERFAMILY SSF46689 455 510 1.43E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 Gene3D G3DSA:1.10.8.60 379 451 1.6E-20 T 12-10-2018 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 Pfam PF00158 Sigma-54 interaction domain 204 370 1.7E-58 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 Pfam PF00989 PAS fold 79 136 1.5E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 SUPERFAMILY SSF52540 203 445 4.9E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 Gene3D G3DSA:1.10.10.60 457 512 1.3E-20 T 12-10-2018 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 Gene3D G3DSA:3.40.50.300 189 375 1.8E-57 T 12-10-2018 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 Gene3D G3DSA:3.30.450.20 80 187 5.1E-23 T 12-10-2018 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 Pfam PF01842 ACT domain 1 60 1.3E-7 T 12-10-2018 IPR002912 ACT domain PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 Gene3D G3DSA:3.30.70.260 1 79 1.2E-21 T 12-10-2018 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 SUPERFAMILY SSF55785 80 138 3.66E-9 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 511 1.7E-21 T 12-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 SMART SM00091 78 144 9.6E-9 T 12-10-2018 IPR000014 PAS domain PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 227 240 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 SUPERFAMILY SSF55021 1 68 3.46E-8 T 12-10-2018 PA257_4974 23e9cbb9caff722c7320799e40a0da0a 515 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 Pfam PF00391 PEP-utilising enzyme, mobile domain 365 436 6.0E-26 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 PIRSF PIRSF000854 1 773 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 SUPERFAMILY SSF52009 329 446 5.23E-34 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 Gene3D G3DSA:3.30.1490.20 1 174 2.6E-68 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 Gene3D G3DSA:3.20.20.60 459 769 1.6E-100 T 12-10-2018 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 1 324 1.1E-119 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 Gene3D G3DSA:3.50.30.10 341 458 1.5E-40 T 12-10-2018 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 675 690 3.5E-5 T 12-10-2018 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 692 707 3.5E-5 T 12-10-2018 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 728 740 3.5E-5 T 12-10-2018 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 Gene3D G3DSA:3.30.470.20 175 338 3.4E-59 T 12-10-2018 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 1 768 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 395 406 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 SUPERFAMILY SSF51621 443 768 4.45E-99 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 SUPERFAMILY SSF56059 1 366 4.47E-104 T 12-10-2018 PA257_4001 22fd4f0fd05276d97fd44a0a8fc5de94 773 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 463 762 2.4E-61 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PA257_4190 b0ccdf03428105efd19627aec74917bb 157 Pfam PF03061 Thioesterase superfamily 52 127 3.0E-10 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_4190 b0ccdf03428105efd19627aec74917bb 157 SUPERFAMILY SSF54637 1 139 6.87E-27 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_4190 b0ccdf03428105efd19627aec74917bb 157 Gene3D G3DSA:3.10.129.10 1 144 1.0E-61 T 12-10-2018 PA257_4190 b0ccdf03428105efd19627aec74917bb 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 112 2.6E-12 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PA257_0888 d356592d5be0766eccf65d997aeb0990 487 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 466 3.3E-94 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_0888 d356592d5be0766eccf65d997aeb0990 487 SUPERFAMILY SSF56954 5 466 1.7E-94 T 12-10-2018 PA257_0888 d356592d5be0766eccf65d997aeb0990 487 Pfam PF02321 Outer membrane efflux protein 285 464 3.0E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_0888 d356592d5be0766eccf65d997aeb0990 487 Pfam PF02321 Outer membrane efflux protein 68 253 2.2E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_0888 d356592d5be0766eccf65d997aeb0990 487 Gene3D G3DSA:1.20.1600.10 56 464 1.6E-113 T 12-10-2018 PA257_0888 d356592d5be0766eccf65d997aeb0990 487 Gene3D G3DSA:2.20.200.10 103 355 1.6E-113 T 12-10-2018 PA257_5909 39439c62f5b2421017372f65915d1729 109 Pfam PF04287 tRNA pseudouridine synthase C 8 104 3.2E-33 T 12-10-2018 IPR023376 YqcC-like domain PA257_5909 39439c62f5b2421017372f65915d1729 109 PIRSF PIRSF006257 2 109 4.8E-40 T 12-10-2018 IPR007384 Protein of unknown function UCP006257 PA257_5909 39439c62f5b2421017372f65915d1729 109 Gene3D G3DSA:1.20.1440.40 3 106 7.7E-32 T 12-10-2018 IPR036814 YqcC-like superfamily PA257_5909 39439c62f5b2421017372f65915d1729 109 SUPERFAMILY SSF158452 7 107 2.88E-34 T 12-10-2018 IPR036814 YqcC-like superfamily PA257_4660 e551e0fa15782c4630142ca8b024a0a2 635 Gene3D G3DSA:3.90.175.10 421 627 3.5E-106 T 12-10-2018 PA257_4660 e551e0fa15782c4630142ca8b024a0a2 635 SUPERFAMILY SSF56864 277 416 5.23E-66 T 12-10-2018 IPR036478 Exotoxin A, middle domain superfamily PA257_4660 e551e0fa15782c4630142ca8b024a0a2 635 Gene3D G3DSA:3.90.1350.10 266 420 1.2E-77 T 12-10-2018 IPR036478 Exotoxin A, middle domain superfamily PA257_4660 e551e0fa15782c4630142ca8b024a0a2 635 Pfam PF09009 Exotoxin A catalytic 410 635 2.0E-156 T 12-10-2018 IPR015099 Exotoxin A catalytic domain GO:0047286 PA257_4660 e551e0fa15782c4630142ca8b024a0a2 635 Gene3D G3DSA:2.60.120.200 26 255 3.2E-122 T 12-10-2018 PA257_4660 e551e0fa15782c4630142ca8b024a0a2 635 Pfam PF09102 Exotoxin A, targeting 277 406 5.5E-86 T 12-10-2018 IPR015186 Exotoxin A, middle domain PA257_4660 e551e0fa15782c4630142ca8b024a0a2 635 SUPERFAMILY SSF49899 27 276 6.33E-135 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PA257_4660 e551e0fa15782c4630142ca8b024a0a2 635 SUPERFAMILY SSF56399 417 628 5.76E-79 T 12-10-2018 PA257_4660 e551e0fa15782c4630142ca8b024a0a2 635 Pfam PF09101 Exotoxin A binding 27 275 3.9E-121 T 12-10-2018 IPR015185 Exotoxin A, binding PA257_1911 2d082550262fe576e9c7fa1872ab3612 196 Gene3D G3DSA:1.10.10.10 145 196 1.2E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1911 2d082550262fe576e9c7fa1872ab3612 196 SUPERFAMILY SSF52172 5 190 9.6E-45 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1911 2d082550262fe576e9c7fa1872ab3612 196 SMART SM01012 135 190 4.2E-15 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 PA257_1911 2d082550262fe576e9c7fa1872ab3612 196 PIRSF PIRSF036382 2 196 7.2E-51 T 12-10-2018 IPR008327 Signal transduction response regulator, antiterminator PA257_1911 2d082550262fe576e9c7fa1872ab3612 196 Pfam PF03861 ANTAR domain 137 190 5.0E-14 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 PA257_1911 2d082550262fe576e9c7fa1872ab3612 196 Gene3D G3DSA:3.40.50.2300 1 128 4.2E-40 T 12-10-2018 PA257_2446 c4f1faca8d7c96a35addfcd9260bb268 476 Gene3D G3DSA:1.10.530.10 303 464 1.3E-29 T 12-10-2018 PA257_2446 c4f1faca8d7c96a35addfcd9260bb268 476 Gene3D G3DSA:3.40.190.10 141 244 2.2E-31 T 12-10-2018 PA257_2446 c4f1faca8d7c96a35addfcd9260bb268 476 SUPERFAMILY SSF53850 47 284 3.6E-24 T 12-10-2018 PA257_2446 c4f1faca8d7c96a35addfcd9260bb268 476 Gene3D G3DSA:3.40.190.10 43 272 2.2E-31 T 12-10-2018 PA257_2446 c4f1faca8d7c96a35addfcd9260bb268 476 Pfam PF01464 Transglycosylase SLT domain 310 418 4.1E-16 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 PA257_2446 c4f1faca8d7c96a35addfcd9260bb268 476 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 271 6.2E-8 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2446 c4f1faca8d7c96a35addfcd9260bb268 476 SUPERFAMILY SSF53955 285 457 3.38E-31 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_3372 02bc9adbb8dcd005d60c73ad26be226f 565 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 5 554 38.804 T 12-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_3372 02bc9adbb8dcd005d60c73ad26be226f 565 Pfam PF03717 Penicillin-binding Protein dimerisation domain 53 201 1.0E-11 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PA257_3372 02bc9adbb8dcd005d60c73ad26be226f 565 Gene3D G3DSA:3.30.450.330 218 542 5.5E-104 T 12-10-2018 PA257_3372 02bc9adbb8dcd005d60c73ad26be226f 565 Gene3D G3DSA:3.90.1310.30 45 217 1.3E-38 T 12-10-2018 PA257_3372 02bc9adbb8dcd005d60c73ad26be226f 565 SUPERFAMILY SSF56601 217 545 1.31E-87 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_3372 02bc9adbb8dcd005d60c73ad26be226f 565 Gene3D G3DSA:3.40.710.10 278 458 5.5E-104 T 12-10-2018 PA257_3372 02bc9adbb8dcd005d60c73ad26be226f 565 Pfam PF00905 Penicillin binding protein transpeptidase domain 242 538 5.6E-81 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PA257_3372 02bc9adbb8dcd005d60c73ad26be226f 565 SUPERFAMILY SSF56519 49 216 2.09E-37 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 PA257_5548 403d2189b8e8b51ec27f358054951723 330 Gene3D G3DSA:2.40.10.350 164 241 7.6E-34 T 12-10-2018 PA257_5548 403d2189b8e8b51ec27f358054951723 330 PIRSF PIRSF038471 1 268 4.6E-74 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 PA257_5548 403d2189b8e8b51ec27f358054951723 330 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 4 261 9.3E-60 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 PA257_5548 403d2189b8e8b51ec27f358054951723 330 Pfam PF04085 rod shape-determining protein MreC 108 253 5.0E-38 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 PA257_5548 403d2189b8e8b51ec27f358054951723 330 Gene3D G3DSA:2.40.10.340 106 251 7.6E-34 T 12-10-2018 PA257_1986 aeb28761beeda995feabfa539f5da3f9 159 Gene3D G3DSA:3.30.428.10 19 157 1.0E-39 T 12-10-2018 IPR036265 HIT-like superfamily PA257_1986 aeb28761beeda995feabfa539f5da3f9 159 PRINTS PR00332 Histidine triad family signature 47 65 7.8E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_1986 aeb28761beeda995feabfa539f5da3f9 159 PRINTS PR00332 Histidine triad family signature 26 42 7.8E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_1986 aeb28761beeda995feabfa539f5da3f9 159 PRINTS PR00332 Histidine triad family signature 115 125 7.8E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_1986 aeb28761beeda995feabfa539f5da3f9 159 Pfam PF01230 HIT domain 32 128 1.4E-26 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_1986 aeb28761beeda995feabfa539f5da3f9 159 SUPERFAMILY SSF54197 19 156 2.55E-39 T 12-10-2018 IPR036265 HIT-like superfamily PA257_6611 2f5f4f856f1048ee8db01a6971a0dd0a 163 Pfam PF02600 Disulfide bond formation protein DsbB 7 157 4.7E-39 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PA257_6611 2f5f4f856f1048ee8db01a6971a0dd0a 163 SUPERFAMILY SSF158442 10 158 3.01E-38 T 12-10-2018 IPR023380 DsbB-like superfamily PA257_6611 2f5f4f856f1048ee8db01a6971a0dd0a 163 Gene3D G3DSA:1.20.1550.10 2 163 1.0E-46 T 12-10-2018 IPR023380 DsbB-like superfamily PA257_6611 2f5f4f856f1048ee8db01a6971a0dd0a 163 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 2 163 22.314 T 12-10-2018 IPR022920 Disulphide bond formation protein DsbB PA257_3211 2b56e16976fefae7f25066750935f8e2 187 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 187 1.7E-50 T 12-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 PA257_3211 2b56e16976fefae7f25066750935f8e2 187 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 187 1.2E-61 T 12-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 PA257_3211 2b56e16976fefae7f25066750935f8e2 187 Gene3D G3DSA:3.30.70.2540 1 187 3.2E-69 T 12-10-2018 PA257_4766 73eb7f97c65cd71f1475c578c6df03ab 112 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 102 8.0E-26 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like PA257_2234 58f2d5707c87c277a7135d531a38049c 1620 PIRSF PIRSF036761 2 1614 0.0 T 12-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 PA257_2234 58f2d5707c87c277a7135d531a38049c 1620 SUPERFAMILY SSF53223 761 962 5.18E-27 T 12-10-2018 PA257_2234 58f2d5707c87c277a7135d531a38049c 1620 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 77 1607 0.0 T 12-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 PA257_2234 58f2d5707c87c277a7135d531a38049c 1620 SUPERFAMILY SSF51735 951 1245 2.82E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 318 442 3.0E-10 T 12-10-2018 IPR000014 PAS domain PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SUPERFAMILY SSF47384 479 560 2.75E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SMART SM00091 322 388 38.0 T 12-10-2018 IPR000014 PAS domain PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SMART SM00091 207 272 0.78 T 12-10-2018 IPR000014 PAS domain PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SMART SM00091 88 155 29.0 T 12-10-2018 IPR000014 PAS domain PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Gene3D G3DSA:1.10.287.130 460 558 6.7E-14 T 12-10-2018 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SMART SM00387 604 715 2.1E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SUPERFAMILY SSF55785 82 188 3.49E-5 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Pfam PF08448 PAS fold 329 437 3.9E-26 T 12-10-2018 IPR013656 PAS fold-4 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SUPERFAMILY SSF55874 551 715 3.67E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Pfam PF00512 His Kinase A (phospho-acceptor) domain 494 560 4.4E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Gene3D G3DSA:3.30.450.20 196 321 6.5E-14 T 12-10-2018 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 668 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 654 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 699 712 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 PRINTS PR00344 Bacterial sensor protein C-terminal signature 675 693 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Gene3D G3DSA:3.40.50.2300 728 861 6.3E-16 T 12-10-2018 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SMART SM00388 494 560 7.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Gene3D G3DSA:3.30.450.20 322 451 1.7E-23 T 12-10-2018 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 605 714 4.8E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Pfam PF00072 Response regulator receiver domain 740 852 1.2E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Pfam PF12860 PAS fold 94 194 2.6E-9 T 12-10-2018 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Pfam PF12860 PAS fold 278 314 1.6E-8 T 12-10-2018 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SUPERFAMILY SSF55785 193 308 4.54E-8 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SMART SM00448 738 852 2.8E-8 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Gene3D G3DSA:3.30.450.20 76 195 3.5E-6 T 12-10-2018 PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Pfam PF13188 PAS domain 209 243 0.013 T 12-10-2018 IPR000014 PAS domain PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SUPERFAMILY SSF52172 737 858 5.12E-18 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 SUPERFAMILY SSF55785 307 433 3.49E-21 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3765 285edf7220b1348ef6b714fa031a9fd1 862 Gene3D G3DSA:3.30.565.10 560 717 1.5E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4138 64fe5e2432b2558ff3c37168beb3a65e 115 SUPERFAMILY SSF51316 1 113 5.65E-29 T 12-10-2018 IPR011057 Mss4-like superfamily PA257_4138 64fe5e2432b2558ff3c37168beb3a65e 115 Gene3D G3DSA:2.170.150.70 3 115 1.0E-29 T 12-10-2018 PA257_4138 64fe5e2432b2558ff3c37168beb3a65e 115 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 110 1.5E-7 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PA257_0256 bc4258022553646a27b51d162b8a29d7 432 Gene3D G3DSA:1.20.1250.20 16 431 1.9E-68 T 12-10-2018 PA257_0256 bc4258022553646a27b51d162b8a29d7 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 129 154 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_0256 bc4258022553646a27b51d162b8a29d7 432 Pfam PF07690 Major Facilitator Superfamily 54 377 4.7E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0256 bc4258022553646a27b51d162b8a29d7 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 26 412 1.3E-139 T 12-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 PA257_0256 bc4258022553646a27b51d162b8a29d7 432 SUPERFAMILY SSF103473 12 424 2.75E-67 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4957 4ca88ce3df5975a0c40c05d735590320 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 252 2.4E-66 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_4957 4ca88ce3df5975a0c40c05d735590320 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site PA257_4957 4ca88ce3df5975a0c40c05d735590320 259 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 251 1.7E-94 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 PA257_4957 4ca88ce3df5975a0c40c05d735590320 259 Gene3D G3DSA:3.40.190.10 111 211 3.3E-80 T 12-10-2018 PA257_4957 4ca88ce3df5975a0c40c05d735590320 259 Gene3D G3DSA:3.40.190.10 27 250 3.3E-80 T 12-10-2018 PA257_4957 4ca88ce3df5975a0c40c05d735590320 259 SMART SM00062 25 254 4.8E-81 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_4957 4ca88ce3df5975a0c40c05d735590320 259 SUPERFAMILY SSF53850 1 255 3.03E-70 T 12-10-2018 PA257_1994 349ca32cf8b88bc14f7fcffc9918aede 156 SUPERFAMILY SSF52499 1 154 3.92E-21 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_1994 349ca32cf8b88bc14f7fcffc9918aede 156 Pfam PF00857 Isochorismatase family 62 151 5.5E-10 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_1994 349ca32cf8b88bc14f7fcffc9918aede 156 Gene3D G3DSA:3.40.50.850 1 156 3.1E-16 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_1268 bb290e286af74211249a93f90ff6c939 317 Pfam PF03466 LysR substrate binding domain 88 295 3.2E-38 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1268 bb290e286af74211249a93f90ff6c939 317 SUPERFAMILY SSF53850 90 298 2.53E-38 T 12-10-2018 PA257_1268 bb290e286af74211249a93f90ff6c939 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.0E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1268 bb290e286af74211249a93f90ff6c939 317 Gene3D G3DSA:3.40.190.290 91 294 6.7E-56 T 12-10-2018 PA257_1268 bb290e286af74211249a93f90ff6c939 317 SUPERFAMILY SSF46785 4 86 6.7E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1268 bb290e286af74211249a93f90ff6c939 317 Gene3D G3DSA:1.10.10.10 3 89 6.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6580 d3fbbfac9491b9a37f1ed4bc723e329d 203 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 193 6.7E-39 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase PA257_6580 d3fbbfac9491b9a37f1ed4bc723e329d 203 Gene3D G3DSA:3.40.50.10420 4 202 6.4E-51 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily PA257_6580 d3fbbfac9491b9a37f1ed4bc723e329d 203 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 193 4.0E-44 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase PA257_6580 d3fbbfac9491b9a37f1ed4bc723e329d 203 SUPERFAMILY SSF100950 8 200 4.33E-52 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_6580 d3fbbfac9491b9a37f1ed4bc723e329d 203 PIRSF PIRSF006806 7 196 5.2E-33 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 13 95 5.9E-30 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 SUPERFAMILY SSF54368 7 100 1.96E-33 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 9.5E-139 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 SUPERFAMILY SSF55931 102 468 1.96E-136 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 Gene3D G3DSA:3.30.590.10 105 456 3.9E-146 T 12-10-2018 PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 Gene3D G3DSA:3.10.20.70 4 104 6.1E-37 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 3.9E-204 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PA257_6411 ae42b588c2bd3f01596a2cc992f2531e 469 SMART SM01230 102 379 7.5E-147 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 321 740 33.596 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 Pfam PF02153 Prephenate dehydrogenase 29 285 1.5E-73 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 Gene3D G3DSA:1.10.3660.10 191 296 3.2E-35 T 12-10-2018 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 ProSitePatterns PS00104 EPSP synthase signature 1. 400 414 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 Gene3D G3DSA:3.65.10.10 333 542 8.1E-161 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 Gene3D G3DSA:3.40.50.720 15 190 1.1E-51 T 12-10-2018 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 SUPERFAMILY SSF51735 16 183 1.94E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 SUPERFAMILY SSF48179 189 295 9.98E-35 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 Gene3D G3DSA:3.65.10.10 325 731 8.1E-161 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 318 731 2.8E-119 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 SUPERFAMILY SSF55205 316 738 3.11E-133 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 ProSitePatterns PS00885 EPSP synthase signature 2. 652 670 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PA257_2137 22d9b83cdde750836feb2e3b88b61983 746 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 325 738 2.6E-126 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 525 4.4E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 Pfam PF00672 HAMP domain 230 279 6.1E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 SUPERFAMILY SSF58104 251 560 1.44E-79 T 12-10-2018 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 Gene3D G3DSA:3.30.450.20 38 185 3.4E-29 T 12-10-2018 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 SMART SM01049 44 135 1.5E-25 T 12-10-2018 IPR033480 Single Cache domain 2 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 SMART SM00304 229 283 6.5E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 Gene3D G3DSA:1.10.287.950 229 560 2.7E-77 T 12-10-2018 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 Pfam PF17200 Single Cache domain 2 50 195 1.2E-24 T 12-10-2018 IPR033480 Single Cache domain 2 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 SMART SM00283 298 559 5.9E-79 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.7E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 2.7E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 423 2.7E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2902 418a72dbfd1d11686e6f8aef03c2a68d 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 319 348 2.7E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_0163 e385d4640b0ebdaae40a0a618361f0a0 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 2.3E-7 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_0163 e385d4640b0ebdaae40a0a618361f0a0 187 Gene3D G3DSA:3.40.30.10 1 186 3.9E-57 T 12-10-2018 PA257_0163 e385d4640b0ebdaae40a0a618361f0a0 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.8E-95 T 12-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_0163 e385d4640b0ebdaae40a0a618361f0a0 187 SUPERFAMILY SSF52833 1 186 1.15E-51 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_0163 e385d4640b0ebdaae40a0a618361f0a0 187 PIRSF PIRSF000239 1 187 5.8E-45 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_0163 e385d4640b0ebdaae40a0a618361f0a0 187 Pfam PF00578 AhpC/TSA family 4 132 4.5E-30 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 450 483 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 Gene3D G3DSA:3.30.1370.120 174 273 1.1E-7 T 12-10-2018 IPR038591 NolW-like superfamily PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 30 505 2.0E-162 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 Gene3D G3DSA:3.30.1370.120 102 172 1.1E-12 T 12-10-2018 IPR038591 NolW-like superfamily PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 Gene3D G3DSA:3.55.50.30 17 101 1.5E-26 T 12-10-2018 PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 Pfam PF03958 Bacterial type II/III secretion system short domain 178 272 1.0E-14 T 12-10-2018 IPR005644 NolW-like PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 Pfam PF00263 Bacterial type II and III secretion system protein 345 505 1.1E-40 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 392 407 7.7E-36 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 190 207 7.7E-36 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 483 502 7.7E-36 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 275 295 7.7E-36 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PA257_4057 6c4cc9d1f8b596f4fd345f740826ca29 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 358 377 7.7E-36 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 SMART SM00564 426 476 89.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 SMART SM00564 723 756 0.0045 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 SMART SM00564 222 253 2.3E-5 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 SMART SM00564 300 332 120.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 SMART SM00564 357 398 9.4 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 Gene3D G3DSA:2.140.10.10 575 802 4.4E-39 T 12-10-2018 PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 Gene3D G3DSA:2.140.10.10 161 574 5.5E-112 T 12-10-2018 PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 Pfam PF13360 PQQ-like domain 236 477 2.7E-9 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 Pfam PF01011 PQQ enzyme repeat 732 766 8.1E-6 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 801 0.0 T 12-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 PA257_3353 04ebada8e4cb99802741ba87c5f59853 803 SUPERFAMILY SSF50998 164 801 6.28E-150 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PA257_4831 58702787cfe1072ceb01d9260cc59489 166 SUPERFAMILY SSF46767 71 151 3.66E-31 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 PA257_4831 58702787cfe1072ceb01d9260cc59489 166 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 151 4.4E-35 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PA257_4831 58702787cfe1072ceb01d9260cc59489 166 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 152 41.499 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 PA257_4831 58702787cfe1072ceb01d9260cc59489 166 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 69 4.3E-7 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PA257_4831 58702787cfe1072ceb01d9260cc59489 166 Gene3D G3DSA:3.30.160.70 1 68 7.5E-17 T 12-10-2018 PA257_4831 58702787cfe1072ceb01d9260cc59489 166 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 151 1.7E-31 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PA257_4831 58702787cfe1072ceb01d9260cc59489 166 SUPERFAMILY SSF53155 1 77 1.57E-15 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PA257_4831 58702787cfe1072ceb01d9260cc59489 166 Gene3D G3DSA:1.10.10.10 69 153 9.0E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4073 77ced11d063478108acfda81e330f45b 121 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 121 2.0E-58 T 12-10-2018 IPR012672 Type III secretion system YscX PA257_4073 77ced11d063478108acfda81e330f45b 121 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 121 4.7E-54 T 12-10-2018 IPR012672 Type III secretion system YscX PA257_0577 532a4283a9c52c33331d9bab69702af4 424 Gene3D G3DSA:3.30.70.20 317 414 1.2E-23 T 12-10-2018 PA257_0577 532a4283a9c52c33331d9bab69702af4 424 Pfam PF01180 Dihydroorotate dehydrogenase 4 305 1.4E-27 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PA257_0577 532a4283a9c52c33331d9bab69702af4 424 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 382 393 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_0577 532a4283a9c52c33331d9bab69702af4 424 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 319 7.5E-50 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PA257_0577 532a4283a9c52c33331d9bab69702af4 424 SUPERFAMILY SSF54862 317 401 3.52E-13 T 12-10-2018 PA257_0577 532a4283a9c52c33331d9bab69702af4 424 Gene3D G3DSA:3.20.20.70 4 310 2.9E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0577 532a4283a9c52c33331d9bab69702af4 424 SUPERFAMILY SSF51395 1 319 9.33E-76 T 12-10-2018 PA257_0577 532a4283a9c52c33331d9bab69702af4 424 Pfam PF14697 4Fe-4S dicluster domain 338 400 3.9E-22 T 12-10-2018 PA257_3405 06e54b28fc95c8e4c8fbb318c4820c00 355 Pfam PF01757 Acyltransferase family 7 322 7.1E-26 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 PA257_4013 cd759aa32267386823fd2738a836dd1b 907 Gene3D G3DSA:1.25.40.10 464 830 2.3E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4013 cd759aa32267386823fd2738a836dd1b 907 Gene3D G3DSA:1.10.10.10 834 906 1.9E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4013 cd759aa32267386823fd2738a836dd1b 907 SUPERFAMILY SSF52540 30 260 8.02E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4013 cd759aa32267386823fd2738a836dd1b 907 Pfam PF00196 Bacterial regulatory proteins, luxR family 845 895 5.3E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4013 cd759aa32267386823fd2738a836dd1b 907 SUPERFAMILY SSF46894 840 904 1.26E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_4013 cd759aa32267386823fd2738a836dd1b 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 844 858 4.1E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4013 cd759aa32267386823fd2738a836dd1b 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 874 886 4.1E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4013 cd759aa32267386823fd2738a836dd1b 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 858 874 4.1E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4013 cd759aa32267386823fd2738a836dd1b 907 Pfam PF13191 AAA ATPase domain 38 169 4.1E-10 T 12-10-2018 PA257_4013 cd759aa32267386823fd2738a836dd1b 907 ProSitePatterns PS00622 LuxR-type HTH domain signature. 858 885 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4013 cd759aa32267386823fd2738a836dd1b 907 SMART SM00421 841 898 2.7E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4013 cd759aa32267386823fd2738a836dd1b 907 Gene3D G3DSA:3.40.50.300 32 182 8.8E-6 T 12-10-2018 PA257_6916 4fd63a74b7570bdfe3567661df4d8f61 262 Pfam PF00905 Penicillin binding protein transpeptidase domain 55 249 1.4E-24 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PA257_6916 4fd63a74b7570bdfe3567661df4d8f61 262 Gene3D G3DSA:3.40.710.10 9 262 3.0E-82 T 12-10-2018 PA257_6916 4fd63a74b7570bdfe3567661df4d8f61 262 SUPERFAMILY SSF56601 34 251 3.94E-36 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_4772 cb55ede394dd7d1edbf29546ae9666bc 370 Gene3D G3DSA:1.10.10.2840 240 368 3.3E-19 T 12-10-2018 PA257_4772 cb55ede394dd7d1edbf29546ae9666bc 370 Pfam PF05651 Putative sugar diacid recognition 4 137 1.7E-49 T 12-10-2018 IPR008599 Putative sugar diacid recognition PA257_4772 cb55ede394dd7d1edbf29546ae9666bc 370 Pfam PF13556 PucR C-terminal helix-turn-helix domain 306 363 1.4E-17 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain PA257_3903 18cb8c32c0ce7223c165f7fa5e7add67 401 SMART SM00267 219 393 4.3E-50 T 12-10-2018 IPR000160 GGDEF domain PA257_3903 18cb8c32c0ce7223c165f7fa5e7add67 401 Pfam PF00990 Diguanylate cyclase, GGDEF domain 230 388 1.4E-41 T 12-10-2018 IPR000160 GGDEF domain PA257_3903 18cb8c32c0ce7223c165f7fa5e7add67 401 SUPERFAMILY SSF55073 235 392 4.16E-43 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_3903 18cb8c32c0ce7223c165f7fa5e7add67 401 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 392 2.2E-44 T 12-10-2018 IPR000160 GGDEF domain PA257_3903 18cb8c32c0ce7223c165f7fa5e7add67 401 Gene3D G3DSA:3.30.70.270 222 391 3.8E-51 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Gene3D G3DSA:2.40.50.140 445 527 3.5E-21 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Gene3D G3DSA:2.40.50.140 187 268 3.7E-28 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SUPERFAMILY SSF50249 1 112 1.33E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SUPERFAMILY SSF50249 342 440 7.46E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SUPERFAMILY SSF50249 189 277 1.94E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Gene3D G3DSA:2.40.50.140 358 444 6.0E-25 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Gene3D G3DSA:2.40.50.140 269 357 2.6E-29 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SUPERFAMILY SSF50249 255 355 6.56E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.5E-220 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SUPERFAMILY SSF50249 104 185 8.95E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Gene3D G3DSA:2.40.50.140 6 98 3.3E-16 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Gene3D G3DSA:2.40.50.140 99 183 2.9E-7 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Pfam PF00575 S1 RNA binding domain 361 434 9.8E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Pfam PF00575 S1 RNA binding domain 103 171 1.8E-11 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Pfam PF00575 S1 RNA binding domain 448 520 1.1E-15 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Pfam PF00575 S1 RNA binding domain 19 85 3.7E-7 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Pfam PF00575 S1 RNA binding domain 275 347 2.0E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 Pfam PF00575 S1 RNA binding domain 189 260 9.1E-22 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SUPERFAMILY SSF50249 429 536 8.95E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SMART SM00316 190 260 1.4E-28 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SMART SM00316 103 171 1.3E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SMART SM00316 275 347 1.8E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SMART SM00316 449 520 2.6E-21 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SMART SM00316 19 87 2.0E-5 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 SMART SM00316 362 434 9.7E-21 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PIRSF PIRSF002111 1 386 2.0E-178 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PIRSF PIRSF002111 384 551 1.4E-39 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.3E-88 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.3E-88 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.3E-88 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.3E-88 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.3E-88 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.3E-88 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.3E-88 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.3E-88 T 12-10-2018 PA257_2139 ac492ed270666f6245d8e0c3d35186c9 559 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.3E-88 T 12-10-2018 PA257_2674 503e8ae52d9edc68c3fcbca94739299c 234 PRINTS PR01805 VacJ lipoprotein signature 103 120 4.5E-28 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PA257_2674 503e8ae52d9edc68c3fcbca94739299c 234 PRINTS PR01805 VacJ lipoprotein signature 35 48 4.5E-28 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PA257_2674 503e8ae52d9edc68c3fcbca94739299c 234 PRINTS PR01805 VacJ lipoprotein signature 139 156 4.5E-28 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PA257_2674 503e8ae52d9edc68c3fcbca94739299c 234 PRINTS PR01805 VacJ lipoprotein signature 52 68 4.5E-28 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PA257_2674 503e8ae52d9edc68c3fcbca94739299c 234 Pfam PF04333 MlaA lipoprotein 34 223 5.7E-77 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PA257_1133 0e2d91198d8b979fb56724d27aa5180e 209 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 200 9.3E-62 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like PA257_1133 0e2d91198d8b979fb56724d27aa5180e 209 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 36.218 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like PA257_1133 0e2d91198d8b979fb56724d27aa5180e 209 Pfam PF02441 Flavoprotein 6 181 1.1E-24 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PA257_1133 0e2d91198d8b979fb56724d27aa5180e 209 Gene3D G3DSA:3.40.50.1950 1 209 4.8E-85 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 PA257_1133 0e2d91198d8b979fb56724d27aa5180e 209 SUPERFAMILY SSF52507 6 202 1.7E-59 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 PA257_1266 84528dd172dbb1446e8c1e014784271c 300 SUPERFAMILY SSF103481 184 288 3.92E-11 T 12-10-2018 PA257_1266 84528dd172dbb1446e8c1e014784271c 300 Pfam PF00892 EamA-like transporter family 5 134 2.2E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_1266 84528dd172dbb1446e8c1e014784271c 300 Pfam PF00892 EamA-like transporter family 150 285 1.2E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_1266 84528dd172dbb1446e8c1e014784271c 300 SUPERFAMILY SSF103481 35 137 2.42E-13 T 12-10-2018 PA257_1912 7417f9835df01f8d9b5edb26736e0351 224 Pfam PF11769 Protein of unknown function (DUF3313) 15 212 2.3E-53 T 12-10-2018 IPR021747 Protein of unknown function DUF3313 PA257_5171 bc856542e062b2a2eae85e3e123115be 304 Gene3D G3DSA:3.40.190.10 167 266 3.2E-32 T 12-10-2018 PA257_5171 bc856542e062b2a2eae85e3e123115be 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5171 bc856542e062b2a2eae85e3e123115be 304 SUPERFAMILY SSF53850 91 301 2.64E-29 T 12-10-2018 PA257_5171 bc856542e062b2a2eae85e3e123115be 304 Pfam PF03466 LysR substrate binding domain 90 297 6.1E-32 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_5171 bc856542e062b2a2eae85e3e123115be 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5171 bc856542e062b2a2eae85e3e123115be 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5171 bc856542e062b2a2eae85e3e123115be 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5171 bc856542e062b2a2eae85e3e123115be 304 Gene3D G3DSA:1.10.10.10 1 89 4.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5171 bc856542e062b2a2eae85e3e123115be 304 SUPERFAMILY SSF46785 2 112 2.62E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5171 bc856542e062b2a2eae85e3e123115be 304 Gene3D G3DSA:3.40.190.10 94 288 3.2E-32 T 12-10-2018 PA257_4155 84a85482edd660739481b5b0e874ce40 215 SUPERFAMILY SSF48008 91 214 6.28E-29 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_4155 84a85482edd660739481b5b0e874ce40 215 Pfam PF07729 FCD domain 94 213 1.9E-28 T 12-10-2018 IPR011711 GntR, C-terminal PA257_4155 84a85482edd660739481b5b0e874ce40 215 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 72 4.7E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4155 84a85482edd660739481b5b0e874ce40 215 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.6E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4155 84a85482edd660739481b5b0e874ce40 215 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.6E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4155 84a85482edd660739481b5b0e874ce40 215 SMART SM00895 92 215 1.1E-19 T 12-10-2018 IPR011711 GntR, C-terminal PA257_4155 84a85482edd660739481b5b0e874ce40 215 Gene3D G3DSA:1.10.10.10 5 77 2.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4155 84a85482edd660739481b5b0e874ce40 215 SUPERFAMILY SSF46785 7 76 2.27E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4155 84a85482edd660739481b5b0e874ce40 215 SMART SM00345 13 72 7.8E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4155 84a85482edd660739481b5b0e874ce40 215 Gene3D G3DSA:1.20.120.530 93 215 2.8E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_5009 773b20cca3b39be1c61f4769382bdd96 319 Gene3D G3DSA:3.30.1180.10 172 314 1.0E-6 T 12-10-2018 PA257_5009 773b20cca3b39be1c61f4769382bdd96 319 SUPERFAMILY SSF82549 1 312 4.45E-47 T 12-10-2018 PA257_5009 773b20cca3b39be1c61f4769382bdd96 319 Gene3D G3DSA:2.20.28.50 28 65 3.0E-15 T 12-10-2018 PA257_5009 773b20cca3b39be1c61f4769382bdd96 319 Gene3D G3DSA:3.40.50.10440 5 151 3.0E-15 T 12-10-2018 PA257_5009 773b20cca3b39be1c61f4769382bdd96 319 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 313 9.8E-77 T 12-10-2018 IPR003797 DegV PA257_0179 c0cc21081ebd5304c4824ceb70c57f1c 239 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 17 238 1.5E-105 T 12-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 PA257_0179 c0cc21081ebd5304c4824ceb70c57f1c 239 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 12 43 1.1E-14 T 12-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 PA257_0179 c0cc21081ebd5304c4824ceb70c57f1c 239 SUPERFAMILY SSF49482 11 238 1.44E-74 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PA257_0179 c0cc21081ebd5304c4824ceb70c57f1c 239 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 81 109 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PA257_0179 c0cc21081ebd5304c4824ceb70c57f1c 239 Gene3D G3DSA:2.60.130.10 3 239 1.5E-100 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PA257_0179 c0cc21081ebd5304c4824ceb70c57f1c 239 Pfam PF00775 Dioxygenase 49 230 6.5E-57 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PA257_0076 1827f8f50a73df3c3829b095f8c8d2a9 295 Gene3D G3DSA:3.60.15.10 32 263 1.4E-31 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_0076 1827f8f50a73df3c3829b095f8c8d2a9 295 Pfam PF00753 Metallo-beta-lactamase superfamily 47 229 9.5E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_0076 1827f8f50a73df3c3829b095f8c8d2a9 295 SMART SM00849 44 229 8.2E-22 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_0076 1827f8f50a73df3c3829b095f8c8d2a9 295 SUPERFAMILY SSF56281 26 253 3.34E-44 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_2046 dd5ea76b29d1402cb530bbedeac3056c 263 SUPERFAMILY SSF63848 157 262 1.96E-28 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 PA257_2046 dd5ea76b29d1402cb530bbedeac3056c 263 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 7 112 7.7E-30 T 12-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 PA257_2046 dd5ea76b29d1402cb530bbedeac3056c 263 Gene3D G3DSA:3.30.750.120 7 122 3.1E-26 T 12-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily PA257_2046 dd5ea76b29d1402cb530bbedeac3056c 263 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 263 3.5E-94 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 PA257_2046 dd5ea76b29d1402cb530bbedeac3056c 263 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 12 263 27.536 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 PA257_2046 dd5ea76b29d1402cb530bbedeac3056c 263 Gene3D G3DSA:2.160.20.70 154 263 5.4E-29 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 PA257_2046 dd5ea76b29d1402cb530bbedeac3056c 263 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 159 260 4.5E-29 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 PA257_1433 a86e4699ed5e7025b17db504cea207cb 314 Gene3D G3DSA:1.10.10.10 1 93 4.6E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1433 a86e4699ed5e7025b17db504cea207cb 314 Gene3D G3DSA:3.40.190.10 94 287 8.6E-32 T 12-10-2018 PA257_1433 a86e4699ed5e7025b17db504cea207cb 314 Gene3D G3DSA:3.40.190.10 163 268 8.6E-32 T 12-10-2018 PA257_1433 a86e4699ed5e7025b17db504cea207cb 314 SUPERFAMILY SSF53850 91 291 3.41E-30 T 12-10-2018 PA257_1433 a86e4699ed5e7025b17db504cea207cb 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.2E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1433 a86e4699ed5e7025b17db504cea207cb 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1433 a86e4699ed5e7025b17db504cea207cb 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1433 a86e4699ed5e7025b17db504cea207cb 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1433 a86e4699ed5e7025b17db504cea207cb 314 Pfam PF03466 LysR substrate binding domain 87 290 2.6E-32 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1433 a86e4699ed5e7025b17db504cea207cb 314 SUPERFAMILY SSF46785 1 86 9.87E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2942 1ee4138acca8e6cadf4b340408743c65 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 11 208 30.367 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 PA257_2942 1ee4138acca8e6cadf4b340408743c65 208 Gene3D G3DSA:2.50.20.10 24 208 4.2E-60 T 12-10-2018 PA257_2942 1ee4138acca8e6cadf4b340408743c65 208 SUPERFAMILY SSF89392 26 207 7.85E-53 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX PA257_2942 1ee4138acca8e6cadf4b340408743c65 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 7 205 2.0E-32 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 PA257_2942 1ee4138acca8e6cadf4b340408743c65 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 36 198 6.5E-57 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PA257_2268 fbb63271f8f4b8e70e03ac5ee34b4456 467 Gene3D G3DSA:1.10.760.10 342 467 2.7E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_2268 fbb63271f8f4b8e70e03ac5ee34b4456 467 SUPERFAMILY SSF46626 345 467 1.6E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_2268 fbb63271f8f4b8e70e03ac5ee34b4456 467 SUPERFAMILY SSF48695 230 383 3.14E-5 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily PA257_3272 e40e46d06ae18c47fa5fa21b8ee693df 338 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 317 1.5E-82 T 12-10-2018 IPR010732 Type VI secretion, TssG-like PA257_3272 e40e46d06ae18c47fa5fa21b8ee693df 338 Pfam PF06996 Type VI secretion, TssG 20 317 5.8E-74 T 12-10-2018 IPR010732 Type VI secretion, TssG-like PA257_4297 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 59 82 9.5E-30 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PA257_4297 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 85 105 9.5E-30 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PA257_4297 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 121 147 9.5E-30 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PA257_4297 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 150 173 9.5E-30 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PA257_4297 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 208 234 9.5E-30 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PA257_4297 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 17 45 9.5E-30 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PA257_4297 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 179 201 9.5E-30 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 PA257_4297 adb6c61c484b4b96164dff917f5b1edd 283 SUPERFAMILY SSF81324 24 234 1.71E-51 T 12-10-2018 PA257_4297 adb6c61c484b4b96164dff917f5b1edd 283 Gene3D G3DSA:1.10.287.70 24 237 3.0E-54 T 12-10-2018 PA257_4297 adb6c61c484b4b96164dff917f5b1edd 283 Pfam PF00520 Ion transport protein 26 235 1.2E-28 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 2.6E-35 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.6E-35 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.6E-35 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 2.6E-35 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 2.6E-35 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 SUPERFAMILY SSF51905 1 375 2.81E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 329 1.5E-69 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PIRSF PIRSF000350 1 463 1.3E-91 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 Gene3D G3DSA:3.50.50.60 6 329 2.9E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 465 1.9E-158 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.4E-78 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 5.4E-78 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 5.4E-78 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 5.4E-78 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 5.4E-78 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 5.4E-78 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 5.4E-78 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 5.4E-78 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 5.4E-78 T 12-10-2018 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 3.2E-39 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 SUPERFAMILY SSF55424 344 465 9.11E-41 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 Gene3D G3DSA:3.30.390.30 347 467 2.3E-44 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 Gene3D G3DSA:3.50.50.60 150 273 2.9E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6103 1050d63349af9b6f3c5e6f9460776924 467 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PA257_3613 77914bc8f84b2d8d0f28797dbf95e1d6 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 7.6E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3613 77914bc8f84b2d8d0f28797dbf95e1d6 301 Pfam PF03466 LysR substrate binding domain 97 296 6.2E-29 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3613 77914bc8f84b2d8d0f28797dbf95e1d6 301 SUPERFAMILY SSF53850 96 297 1.34E-42 T 12-10-2018 PA257_3613 77914bc8f84b2d8d0f28797dbf95e1d6 301 Gene3D G3DSA:1.10.10.10 1 90 9.7E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3613 77914bc8f84b2d8d0f28797dbf95e1d6 301 Gene3D G3DSA:3.40.190.10 96 294 3.3E-60 T 12-10-2018 PA257_3613 77914bc8f84b2d8d0f28797dbf95e1d6 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 4.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3613 77914bc8f84b2d8d0f28797dbf95e1d6 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 4.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3613 77914bc8f84b2d8d0f28797dbf95e1d6 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 4.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3613 77914bc8f84b2d8d0f28797dbf95e1d6 301 Gene3D G3DSA:3.40.190.10 172 270 3.3E-60 T 12-10-2018 PA257_3613 77914bc8f84b2d8d0f28797dbf95e1d6 301 SUPERFAMILY SSF46785 5 85 1.81E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5270 2989994036a38af7939a12b7d05fa7cf 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.9E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5270 2989994036a38af7939a12b7d05fa7cf 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.9E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5270 2989994036a38af7939a12b7d05fa7cf 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.9E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5270 2989994036a38af7939a12b7d05fa7cf 296 SUPERFAMILY SSF46785 1 85 1.25E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5270 2989994036a38af7939a12b7d05fa7cf 296 Pfam PF03466 LysR substrate binding domain 87 293 3.9E-37 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_5270 2989994036a38af7939a12b7d05fa7cf 296 Gene3D G3DSA:3.40.190.10 89 287 8.0E-36 T 12-10-2018 PA257_5270 2989994036a38af7939a12b7d05fa7cf 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.8E-23 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5270 2989994036a38af7939a12b7d05fa7cf 296 Gene3D G3DSA:1.10.10.10 1 85 4.7E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5270 2989994036a38af7939a12b7d05fa7cf 296 Gene3D G3DSA:3.40.190.10 162 268 8.0E-36 T 12-10-2018 PA257_5270 2989994036a38af7939a12b7d05fa7cf 296 SUPERFAMILY SSF53850 88 294 5.12E-36 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 1.2E-105 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.2E-105 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 1.2E-105 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 1.2E-105 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 1.2E-105 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.2E-105 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.2E-105 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 1.2E-105 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 1.2E-105 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 Gene3D G3DSA:3.30.70.1430 566 665 0.0 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 Gene3D G3DSA:3.30.70.1440 666 862 0.0 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 Gene3D G3DSA:1.20.1640.10 512 1019 0.0 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 Gene3D G3DSA:3.30.2090.10 718 806 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 Gene3D G3DSA:3.30.2090.10 178 274 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 Gene3D G3DSA:1.20.1640.10 8 511 0.0 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 SUPERFAMILY SSF82693 38 130 3.14E-24 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 SUPERFAMILY SSF82866 295 497 8.76E-50 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 SUPERFAMILY SSF82693 135 329 1.36E-25 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 SUPERFAMILY SSF82693 564 667 6.02E-25 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 SUPERFAMILY SSF82714 181 270 4.58E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1032 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 SUPERFAMILY SSF82866 803 1025 1.05E-44 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 Gene3D G3DSA:3.30.70.1430 38 814 0.0 T 12-10-2018 PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 SUPERFAMILY SSF82714 719 805 5.62E-20 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3719 572c3c5f2a129f464e8fe5c5c0408201 1045 Gene3D G3DSA:3.30.70.1320 132 331 0.0 T 12-10-2018 PA257_0122 4d5c0a69d7587f9b3935357386833ba5 304 SUPERFAMILY SSF110296 74 285 2.35E-5 T 12-10-2018 PA257_4589 68fec5928173e5d92ecff80497c605a9 455 SUPERFAMILY SSF51569 2 277 1.83E-67 T 12-10-2018 PA257_4589 68fec5928173e5d92ecff80497c605a9 455 SUPERFAMILY SSF51182 400 442 6.77E-5 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4589 68fec5928173e5d92ecff80497c605a9 455 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 189 202 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PA257_4589 68fec5928173e5d92ecff80497c605a9 455 Gene3D G3DSA:2.60.120.10 367 455 3.4E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4589 68fec5928173e5d92ecff80497c605a9 455 Gene3D G3DSA:3.20.20.70 1 308 5.4E-83 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4589 68fec5928173e5d92ecff80497c605a9 455 Pfam PF00682 HMGL-like 2 259 7.5E-59 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PA257_6616 74b6847b6ad76a43e62e20cf63810008 248 SMART SM00850 148 246 8.0E-25 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 PA257_6616 74b6847b6ad76a43e62e20cf63810008 248 SMART SM00448 1 113 6.8E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6616 74b6847b6ad76a43e62e20cf63810008 248 Gene3D G3DSA:3.40.50.2300 1 124 9.1E-34 T 12-10-2018 PA257_6616 74b6847b6ad76a43e62e20cf63810008 248 Pfam PF00072 Response regulator receiver domain 3 113 4.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6616 74b6847b6ad76a43e62e20cf63810008 248 Gene3D G3DSA:2.40.50.40 138 206 2.4E-7 T 12-10-2018 PA257_6616 74b6847b6ad76a43e62e20cf63810008 248 Pfam PF04397 LytTr DNA-binding domain 149 245 3.4E-21 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 PA257_6616 74b6847b6ad76a43e62e20cf63810008 248 SUPERFAMILY SSF52172 1 122 9.11E-34 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1375 391a6f48b99c63e983023bed1de3ed31 110 Gene3D G3DSA:2.30.29.190 1 110 3.4E-50 T 12-10-2018 PA257_6517 ac14cd080f013b60b76030f28483892f 462 SMART SM00382 172 315 1.9E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6517 ac14cd080f013b60b76030f28483892f 462 Pfam PF00072 Response regulator receiver domain 13 122 8.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6517 ac14cd080f013b60b76030f28483892f 462 Gene3D G3DSA:1.10.8.60 323 384 1.2E-18 T 12-10-2018 PA257_6517 ac14cd080f013b60b76030f28483892f 462 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 176 189 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_6517 ac14cd080f013b60b76030f28483892f 462 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 365 374 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_6517 ac14cd080f013b60b76030f28483892f 462 SUPERFAMILY SSF52540 152 381 6.84E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6517 ac14cd080f013b60b76030f28483892f 462 Gene3D G3DSA:3.40.50.300 141 322 2.4E-61 T 12-10-2018 PA257_6517 ac14cd080f013b60b76030f28483892f 462 Gene3D G3DSA:1.10.10.60 396 450 1.3E-9 T 12-10-2018 PA257_6517 ac14cd080f013b60b76030f28483892f 462 Pfam PF00158 Sigma-54 interaction domain 152 318 5.9E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_6517 ac14cd080f013b60b76030f28483892f 462 Gene3D G3DSA:3.40.50.2300 7 136 1.8E-38 T 12-10-2018 PA257_6517 ac14cd080f013b60b76030f28483892f 462 SUPERFAMILY SSF52172 12 197 1.08E-42 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6517 ac14cd080f013b60b76030f28483892f 462 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 9.0E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_6517 ac14cd080f013b60b76030f28483892f 462 SMART SM00448 11 122 4.4E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6517 ac14cd080f013b60b76030f28483892f 462 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 238 253 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_6517 ac14cd080f013b60b76030f28483892f 462 SUPERFAMILY SSF46689 397 448 1.79E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6517 ac14cd080f013b60b76030f28483892f 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 449 5.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_6517 ac14cd080f013b60b76030f28483892f 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 429 5.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_0811 8424822d41dd1ed21daab6411d35028f 248 Pfam PF03309 Type III pantothenate kinase 2 200 1.4E-45 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 PA257_0811 8424822d41dd1ed21daab6411d35028f 248 Gene3D G3DSA:3.30.420.40 5 241 6.1E-86 T 12-10-2018 PA257_0811 8424822d41dd1ed21daab6411d35028f 248 SUPERFAMILY SSF53067 116 245 3.45E-31 T 12-10-2018 PA257_0811 8424822d41dd1ed21daab6411d35028f 248 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 243 1.3E-24 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 PA257_0811 8424822d41dd1ed21daab6411d35028f 248 SUPERFAMILY SSF53067 1 113 5.05E-27 T 12-10-2018 PA257_0811 8424822d41dd1ed21daab6411d35028f 248 Gene3D G3DSA:3.30.420.490 117 234 6.1E-86 T 12-10-2018 PA257_0811 8424822d41dd1ed21daab6411d35028f 248 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 248 18.567 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 PA257_0842 0f172d6b2e1dfd324cd372b9538696e4 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.964 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PA257_0842 0f172d6b2e1dfd324cd372b9538696e4 122 SUPERFAMILY SSF50193 1 122 3.92E-52 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 PA257_0842 0f172d6b2e1dfd324cd372b9538696e4 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0842 0f172d6b2e1dfd324cd372b9538696e4 122 Gene3D G3DSA:2.40.150.20 1 122 9.6E-55 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 PA257_0842 0f172d6b2e1dfd324cd372b9538696e4 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.6E-58 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 PA257_0842 0f172d6b2e1dfd324cd372b9538696e4 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.6E-55 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PA257_0842 0f172d6b2e1dfd324cd372b9538696e4 122 SMART SM01374 1 122 4.5E-86 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PA257_1354 59782e5ebe6157e88a79deff7ede8e8a 404 Gene3D G3DSA:3.40.640.10 16 262 2.4E-162 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_1354 59782e5ebe6157e88a79deff7ede8e8a 404 Gene3D G3DSA:3.90.1150.10 5 376 2.4E-162 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_1354 59782e5ebe6157e88a79deff7ede8e8a 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 53.608 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 PA257_1354 59782e5ebe6157e88a79deff7ede8e8a 404 SUPERFAMILY SSF53383 5 391 6.12E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_1354 59782e5ebe6157e88a79deff7ede8e8a 404 PIRSF PIRSF005572 2 384 5.7E-131 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 PA257_1354 59782e5ebe6157e88a79deff7ede8e8a 404 Pfam PF00266 Aminotransferase class-V 5 368 4.8E-84 T 12-10-2018 IPR000192 Aminotransferase class V domain PA257_1354 59782e5ebe6157e88a79deff7ede8e8a 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PA257_1354 59782e5ebe6157e88a79deff7ede8e8a 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.6E-234 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 PA257_6756 d8ac75504bfe2c53874d50a093bf5f1f 761 SUPERFAMILY SSF161098 452 522 3.66E-6 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6756 d8ac75504bfe2c53874d50a093bf5f1f 761 SUPERFAMILY SSF50978 106 393 3.48E-9 T 12-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 PA257_6756 d8ac75504bfe2c53874d50a093bf5f1f 761 Gene3D G3DSA:1.10.3720.10 527 758 1.2E-21 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6756 d8ac75504bfe2c53874d50a093bf5f1f 761 SUPERFAMILY SSF161098 530 746 3.66E-18 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6756 d8ac75504bfe2c53874d50a093bf5f1f 761 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 478 756 1.3E-10 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3370 4ec0189b806f466416f17bf2551ae1d3 125 SUPERFAMILY SSF54909 15 120 6.34E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_3370 4ec0189b806f466416f17bf2551ae1d3 125 Pfam PF03992 Antibiotic biosynthesis monooxygenase 48 93 1.3E-5 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PA257_3370 4ec0189b806f466416f17bf2551ae1d3 125 Gene3D G3DSA:3.30.70.100 18 120 7.8E-15 T 12-10-2018 PA257_1568 e5dce18c9f5be27837de0c012fcb3caa 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.7E-70 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 PA257_1568 e5dce18c9f5be27837de0c012fcb3caa 185 Pfam PF01765 Ribosome recycling factor 22 183 5.1E-62 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 PA257_1568 e5dce18c9f5be27837de0c012fcb3caa 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.534 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 PA257_1568 e5dce18c9f5be27837de0c012fcb3caa 185 Gene3D G3DSA:3.30.1360.40 31 105 6.3E-67 T 12-10-2018 PA257_1568 e5dce18c9f5be27837de0c012fcb3caa 185 SUPERFAMILY SSF55194 1 185 4.71E-70 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 PA257_1568 e5dce18c9f5be27837de0c012fcb3caa 185 Gene3D G3DSA:1.10.132.20 13 182 6.3E-67 T 12-10-2018 PA257_3082 a176c4e11f41a5b265197b7c5049a53e 307 SUPERFAMILY SSF50129 1 119 3.3E-18 T 12-10-2018 IPR011032 GroES-like superfamily PA257_3082 a176c4e11f41a5b265197b7c5049a53e 307 Gene3D G3DSA:3.90.180.10 1 303 5.3E-66 T 12-10-2018 PA257_3082 a176c4e11f41a5b265197b7c5049a53e 307 Gene3D G3DSA:3.40.50.720 94 241 5.3E-66 T 12-10-2018 PA257_3082 a176c4e11f41a5b265197b7c5049a53e 307 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1 58 1.7E-5 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_3082 a176c4e11f41a5b265197b7c5049a53e 307 Pfam PF13602 Zinc-binding dehydrogenase 157 303 2.1E-17 T 12-10-2018 PA257_3082 a176c4e11f41a5b265197b7c5049a53e 307 SUPERFAMILY SSF51735 87 242 3.83E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3082 a176c4e11f41a5b265197b7c5049a53e 307 SMART SM00829 7 303 3.0E-10 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 SUPERFAMILY SSF50249 49 125 1.77E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 SMART SM00382 170 355 6.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 Gene3D G3DSA:3.40.50.300 130 417 5.3E-135 T 12-10-2018 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 4.8E-15 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 SMART SM00959 5 47 9.0E-16 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.3E-219 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 SUPERFAMILY SSF68912 1 46 3.92E-11 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.7E-24 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 253.582 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.0E-32 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 Gene3D G3DSA:2.40.50.140 48 123 1.1E-34 T 12-10-2018 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 Gene3D G3DSA:1.10.720.10 1 47 9.0E-21 T 12-10-2018 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 SMART SM00357 52 118 8.8E-20 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 PA257_6592 397e54baea9a8d6f1559af43fbbe05c1 419 SUPERFAMILY SSF52540 90 371 3.24E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2791 fd5993183d1ca45a8d5ac6a9890dad36 237 SUPERFAMILY SSF54060 23 223 6.36E-83 T 12-10-2018 PA257_2791 fd5993183d1ca45a8d5ac6a9890dad36 237 Pfam PF04231 Endonuclease I 25 221 9.8E-38 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 PA257_6383 2665d03ff1fa971b298455f6092cd143 402 Pfam PF01979 Amidohydrolase family 58 376 3.1E-21 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_6383 2665d03ff1fa971b298455f6092cd143 402 Gene3D G3DSA:2.30.40.10 8 393 5.3E-164 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_6383 2665d03ff1fa971b298455f6092cd143 402 SUPERFAMILY SSF51338 1 399 1.36E-28 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_6383 2665d03ff1fa971b298455f6092cd143 402 TIGRFAM TIGR01224 hutI: imidazolonepropionase 22 394 4.8E-148 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6383 2665d03ff1fa971b298455f6092cd143 402 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 42.88 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PA257_6383 2665d03ff1fa971b298455f6092cd143 402 SUPERFAMILY SSF51556 60 360 2.27E-87 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_6383 2665d03ff1fa971b298455f6092cd143 402 Gene3D G3DSA:3.20.20.140 61 359 5.3E-164 T 12-10-2018 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 SUPERFAMILY SSF55979 1 120 3.14E-29 T 12-10-2018 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 SUPERFAMILY SSF55979 246 367 7.25E-38 T 12-10-2018 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 SMART SM00480 17 363 1.3E-163 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 Gene3D G3DSA:3.10.150.10 124 248 8.4E-41 T 12-10-2018 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 SUPERFAMILY SSF55979 126 245 3.14E-31 T 12-10-2018 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 PIRSF PIRSF000804 1 367 3.5E-125 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 Gene3D G3DSA:3.10.150.10 249 367 1.2E-42 T 12-10-2018 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 244 1.6E-39 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 4.2E-41 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 7.3E-111 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 8.3E-42 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 PA257_0002 11d65719c9b894c83788e1ecf656bf53 367 Gene3D G3DSA:3.10.150.10 1 123 2.2E-50 T 12-10-2018 PA257_6331 4c8666645cd316209055568c544713ea 710 Pfam PF03958 Bacterial type II/III secretion system short domain 381 447 2.5E-14 T 12-10-2018 IPR005644 NolW-like PA257_6331 4c8666645cd316209055568c544713ea 710 Gene3D G3DSA:3.55.50.30 280 351 2.2E-10 T 12-10-2018 PA257_6331 4c8666645cd316209055568c544713ea 710 Gene3D G3DSA:2.60.40.3470 144 266 2.9E-32 T 12-10-2018 PA257_6331 4c8666645cd316209055568c544713ea 710 Pfam PF11741 AMIN domain 38 121 8.1E-7 T 12-10-2018 IPR021731 AMIN domain PA257_6331 4c8666645cd316209055568c544713ea 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 666 684 5.8E-18 T 12-10-2018 IPR001775 GspD/PilQ family PA257_6331 4c8666645cd316209055568c544713ea 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 689 703 5.8E-18 T 12-10-2018 IPR001775 GspD/PilQ family PA257_6331 4c8666645cd316209055568c544713ea 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 447 457 5.8E-18 T 12-10-2018 IPR001775 GspD/PilQ family PA257_6331 4c8666645cd316209055568c544713ea 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 541 565 5.8E-18 T 12-10-2018 IPR001775 GspD/PilQ family PA257_6331 4c8666645cd316209055568c544713ea 710 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 647 680 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 PA257_6331 4c8666645cd316209055568c544713ea 710 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 281 702 1.3E-162 T 12-10-2018 IPR013355 Type IV pilus secretin PilQ PA257_6331 4c8666645cd316209055568c544713ea 710 SMART SM00965 306 354 1.4E-10 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_6331 4c8666645cd316209055568c544713ea 710 Pfam PF00263 Bacterial type II and III secretion system protein 545 701 1.3E-49 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 PA257_6331 4c8666645cd316209055568c544713ea 710 Pfam PF07660 Secretin and TonB N terminus short domain 307 353 1.6E-8 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_6331 4c8666645cd316209055568c544713ea 710 Gene3D G3DSA:3.30.1370.120 352 448 3.0E-22 T 12-10-2018 IPR038591 NolW-like superfamily PA257_3763 3280f0bb9f328d91ed4859b283861585 221 Pfam PF00072 Response regulator receiver domain 4 117 4.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3763 3280f0bb9f328d91ed4859b283861585 221 SUPERFAMILY SSF52172 1 131 4.7E-28 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3763 3280f0bb9f328d91ed4859b283861585 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3763 3280f0bb9f328d91ed4859b283861585 221 SUPERFAMILY SSF46894 146 211 8.84E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_3763 3280f0bb9f328d91ed4859b283861585 221 SMART SM00448 2 116 2.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3763 3280f0bb9f328d91ed4859b283861585 221 Gene3D G3DSA:3.40.50.12740 3 213 1.4E-52 T 12-10-2018 PA257_3763 3280f0bb9f328d91ed4859b283861585 221 SMART SM00421 153 210 1.8E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3763 3280f0bb9f328d91ed4859b283861585 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 3.4E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3763 3280f0bb9f328d91ed4859b283861585 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 3.4E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3763 3280f0bb9f328d91ed4859b283861585 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 3.4E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3763 3280f0bb9f328d91ed4859b283861585 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 8.2E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4230 ec31775e5d1cf902f3e41bef1b171559 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 9 45 3.1E-9 T 12-10-2018 IPR008621 Cbb3-type cytochrome oxidase component PA257_5068 f020c665a9672d91d5422bf166c780b5 128 SMART SM00421 17 74 1.6E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_5068 f020c665a9672d91d5422bf166c780b5 128 SUPERFAMILY SSF46894 17 81 6.12E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_5068 f020c665a9672d91d5422bf166c780b5 128 Gene3D G3DSA:1.10.10.10 20 80 4.6E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5068 f020c665a9672d91d5422bf166c780b5 128 Pfam PF00196 Bacterial regulatory proteins, luxR family 20 73 1.1E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 391 486 1.7E-13 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 20 37 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 Gene3D G3DSA:1.10.8.870 402 471 3.3E-23 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 Gene3D G3DSA:3.50.50.60 16 376 2.8E-138 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 SUPERFAMILY SSF51905 15 306 7.93E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 Gene3D G3DSA:3.30.9.10 93 330 2.8E-138 T 12-10-2018 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 Pfam PF01266 FAD dependent oxidoreductase 16 369 3.5E-49 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 44 56 2.3E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 2.3E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 89 101 2.3E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 323 329 2.3E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 15 27 2.3E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_1691 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 28 38 2.3E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_3311 b4162c423ec42bdd80dc26db4756a6b1 355 SUPERFAMILY SSF56645 7 210 2.23E-30 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_3311 b4162c423ec42bdd80dc26db4756a6b1 355 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 102 5.6E-7 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_3311 b4162c423ec42bdd80dc26db4756a6b1 355 Gene3D G3DSA:2.40.110.10 116 215 1.3E-8 T 12-10-2018 PA257_3311 b4162c423ec42bdd80dc26db4756a6b1 355 Gene3D G3DSA:1.10.540.10 4 104 8.8E-13 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_4356 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Gene3D G3DSA:1.10.10.10 122 227 3.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4356 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.9E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_4356 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 SMART SM00862 145 220 9.6E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_4356 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 SUPERFAMILY SSF52172 1 176 1.13E-39 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4356 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 3.4E-97 T 12-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PA257_4356 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Gene3D G3DSA:3.40.50.2300 1 121 7.0E-38 T 12-10-2018 PA257_4356 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Pfam PF00072 Response regulator receiver domain 3 111 8.5E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4356 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 SMART SM00448 1 111 2.3E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4864 0f3ec3cf7f7b0c3c4b8a831a6dcbf438 169 ProSitePatterns PS01068 OmpA-like domain. 101 145 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PA257_4864 0f3ec3cf7f7b0c3c4b8a831a6dcbf438 169 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 3 169 30.199 T 12-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 PA257_4864 0f3ec3cf7f7b0c3c4b8a831a6dcbf438 169 SUPERFAMILY SSF103088 61 167 3.92E-35 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_4864 0f3ec3cf7f7b0c3c4b8a831a6dcbf438 169 PRINTS PR01021 OMPA domain signature 70 92 1.3E-20 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_4864 0f3ec3cf7f7b0c3c4b8a831a6dcbf438 169 PRINTS PR01021 OMPA domain signature 99 114 1.3E-20 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_4864 0f3ec3cf7f7b0c3c4b8a831a6dcbf438 169 PRINTS PR01021 OMPA domain signature 114 130 1.3E-20 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_4864 0f3ec3cf7f7b0c3c4b8a831a6dcbf438 169 Gene3D G3DSA:3.30.1330.60 48 168 5.9E-38 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_4864 0f3ec3cf7f7b0c3c4b8a831a6dcbf438 169 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 68 168 3.8E-42 T 12-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 PA257_4864 0f3ec3cf7f7b0c3c4b8a831a6dcbf438 169 Pfam PF00691 OmpA family 69 163 3.7E-25 T 12-10-2018 IPR006665 OmpA-like domain PA257_5027 90ca63644a40c206b36ca1d0b10db741 1163 SUPERFAMILY SSF49265 656 718 2.01E-5 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 PA257_5027 90ca63644a40c206b36ca1d0b10db741 1163 Gene3D G3DSA:2.10.10.20 871 915 3.3E-5 T 12-10-2018 PA257_5027 90ca63644a40c206b36ca1d0b10db741 1163 Pfam PF09327 Domain of unknown function (DUF1983) 1009 1087 1.1E-19 T 12-10-2018 IPR015406 Domain of unknown function DUF1983 PA257_5027 90ca63644a40c206b36ca1d0b10db741 1163 Pfam PF13550 Putative phage tail protein 354 520 4.1E-20 T 12-10-2018 IPR032876 Tip attachment protein J PA257_2015 2e61c2c046a836eae1b0c9b75973e1d7 189 SUPERFAMILY SSF55729 5 172 1.35E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_2015 2e61c2c046a836eae1b0c9b75973e1d7 189 Gene3D G3DSA:3.40.630.30 1 189 2.8E-55 T 12-10-2018 PA257_2015 2e61c2c046a836eae1b0c9b75973e1d7 189 Pfam PF13302 Acetyltransferase (GNAT) domain 14 146 4.1E-11 T 12-10-2018 IPR000182 GNAT domain PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 815 3.6E-284 T 12-10-2018 PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 SUPERFAMILY SSF52540 375 812 1.33E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 SUPERFAMILY SSF52540 2 360 2.39E-101 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 SUPERFAMILY SSF52980 830 1149 4.08E-62 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1152 20.046 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 Gene3D G3DSA:3.40.50.10930 2 317 5.0E-116 T 12-10-2018 PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 PIRSF PIRSF000980 1 1157 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 Gene3D G3DSA:3.40.50.300 348 816 1.6E-191 T 12-10-2018 PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 1 1114 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 Gene3D G3DSA:1.10.10.160 86 201 5.0E-116 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily PA257_5346 3967487a7c5114b42ea67025c388e1e7 1157 Gene3D G3DSA:1.10.486.10 464 673 1.6E-191 T 12-10-2018 PA257_2057 891def7dc02a5310dfbac09126586ee1 599 SUPERFAMILY SSF54631 153 264 6.06E-15 T 12-10-2018 PA257_2057 891def7dc02a5310dfbac09126586ee1 599 Pfam PF00027 Cyclic nucleotide-binding domain 31 111 4.6E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_2057 891def7dc02a5310dfbac09126586ee1 599 Pfam PF03445 Putative nucleotidyltransferase DUF294 290 420 4.0E-42 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 PA257_2057 891def7dc02a5310dfbac09126586ee1 599 SMART SM00116 218 265 0.015 T 12-10-2018 IPR000644 CBS domain PA257_2057 891def7dc02a5310dfbac09126586ee1 599 SMART SM00116 152 201 59.0 T 12-10-2018 IPR000644 CBS domain PA257_2057 891def7dc02a5310dfbac09126586ee1 599 Gene3D G3DSA:2.60.120.10 5 138 4.2E-13 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_2057 891def7dc02a5310dfbac09126586ee1 599 SMART SM00100 11 127 2.8E-5 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_2057 891def7dc02a5310dfbac09126586ee1 599 Pfam PF00571 CBS domain 222 263 0.0022 T 12-10-2018 IPR000644 CBS domain PA257_2057 891def7dc02a5310dfbac09126586ee1 599 Gene3D G3DSA:3.10.580.10 151 273 2.7E-13 T 12-10-2018 PA257_2057 891def7dc02a5310dfbac09126586ee1 599 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 458 594 7.9E-39 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding PA257_2057 891def7dc02a5310dfbac09126586ee1 599 SUPERFAMILY SSF51206 9 135 9.95E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like PA257_1036 44087d2f33d192823aa8bb0e61aa743e 461 Pfam PF14793 Domain of unknown function (DUF4478) 10 115 2.0E-44 T 12-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 PA257_1036 44087d2f33d192823aa8bb0e61aa743e 461 Gene3D G3DSA:3.40.50.450 124 455 3.1E-119 T 12-10-2018 PA257_1036 44087d2f33d192823aa8bb0e61aa743e 461 Gene3D G3DSA:3.30.1850.10 6 123 4.3E-46 T 12-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 PA257_1036 44087d2f33d192823aa8bb0e61aa743e 461 Pfam PF11892 Domain of unknown function (DUF3412) 335 456 6.7E-56 T 12-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 PA257_1036 44087d2f33d192823aa8bb0e61aa743e 461 Pfam PF03641 Possible lysine decarboxylase 192 331 2.0E-31 T 12-10-2018 IPR031100 LOG family PA257_1036 44087d2f33d192823aa8bb0e61aa743e 461 SUPERFAMILY SSF102405 122 331 2.14E-41 T 12-10-2018 PA257_1810 1732b9ba5bb62c601790d21af29fb71a 585 Pfam PF00583 Acetyltransferase (GNAT) family 158 248 6.3E-11 T 12-10-2018 IPR000182 GNAT domain PA257_1810 1732b9ba5bb62c601790d21af29fb71a 585 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 280 289 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site PA257_1810 1732b9ba5bb62c601790d21af29fb71a 585 Gene3D G3DSA:3.30.470.20 487 577 3.6E-10 T 12-10-2018 PA257_1810 1732b9ba5bb62c601790d21af29fb71a 585 Gene3D G3DSA:3.40.630.30 12 263 3.9E-23 T 12-10-2018 PA257_1810 1732b9ba5bb62c601790d21af29fb71a 585 SUPERFAMILY SSF56059 333 578 1.25E-31 T 12-10-2018 PA257_1810 1732b9ba5bb62c601790d21af29fb71a 585 TIGRFAM TIGR03103 trio_acet_GNAT: GNAT-family acetyltransferase TIGR03103 40 582 2.8E-274 T 12-10-2018 IPR017534 GNAT-acetyltransferase PA257_1810 1732b9ba5bb62c601790d21af29fb71a 585 Pfam PF08443 RimK-like ATP-grasp domain 332 434 2.4E-8 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 PA257_1810 1732b9ba5bb62c601790d21af29fb71a 585 Gene3D G3DSA:3.30.1490.20 348 413 2.8E-13 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_1810 1732b9ba5bb62c601790d21af29fb71a 585 Gene3D G3DSA:3.30.470.20 326 434 2.8E-13 T 12-10-2018 PA257_1810 1732b9ba5bb62c601790d21af29fb71a 585 SUPERFAMILY SSF55729 63 255 3.31E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6082 798e6e4f687a3eef33912d7c9b772b73 208 Pfam PF01292 Prokaryotic cytochrome b561 7 175 5.6E-21 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PA257_6082 798e6e4f687a3eef33912d7c9b772b73 208 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 5 203 1.2E-60 T 12-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 PA257_6082 798e6e4f687a3eef33912d7c9b772b73 208 SUPERFAMILY SSF81342 3 206 1.41E-51 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PA257_6082 798e6e4f687a3eef33912d7c9b772b73 208 Gene3D G3DSA:1.20.950.20 1 208 8.1E-65 T 12-10-2018 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 219 232 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 Gene3D G3DSA:3.40.50.300 188 365 5.6E-67 T 12-10-2018 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 477 497 1.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 477 1.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 Pfam PF00158 Sigma-54 interaction domain 195 361 1.6E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 SUPERFAMILY SSF52540 194 436 3.55E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 SMART SM00382 215 358 1.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 Gene3D G3DSA:1.10.10.60 441 498 1.1E-13 T 12-10-2018 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 SUPERFAMILY SSF46689 409 496 8.24E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 Gene3D G3DSA:3.30.450.40 12 177 3.2E-7 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 281 296 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 Pfam PF02954 Bacterial regulatory protein, Fis family 454 493 7.6E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 SUPERFAMILY SSF55781 27 174 4.36E-8 T 12-10-2018 PA257_4112 4fbd71d3ed02d04b4e1f4a9d2795e01c 503 Gene3D G3DSA:1.10.8.60 366 440 1.0E-16 T 12-10-2018 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Gene3D G3DSA:3.30.870.10 548 731 1.2E-71 T 12-10-2018 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Gene3D G3DSA:3.30.1840.10 46 360 6.3E-103 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Pfam PF13089 Polyphosphate kinase N-terminal domain 53 158 2.0E-35 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 PIRSF PIRSF015589 23 734 6.9E-288 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 53 726 4.6E-288 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 SUPERFAMILY SSF143724 156 361 1.8E-61 T 12-10-2018 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 SUPERFAMILY SSF56024 548 727 1.32E-73 T 12-10-2018 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Pfam PF13090 Polyphosphate kinase C-terminal domain 379 725 2.8E-153 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Gene3D G3DSA:3.30.870.10 365 547 1.4E-68 T 12-10-2018 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Pfam PF02503 Polyphosphate kinase middle domain 169 369 2.0E-63 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 SUPERFAMILY SSF56024 362 544 1.54E-56 T 12-10-2018 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Hamap MF_00347 Polyphosphate kinase [ppk]. 50 730 28.766 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PA257_6596 b911fbd4e383ef1ed5ab26f74bd6ef05 736 SUPERFAMILY SSF140356 50 154 9.16E-37 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 Gene3D G3DSA:4.10.950.10 197 273 1.8E-35 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.7E-128 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 PIRSF PIRSF002158 12 273 2.0E-100 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 8.4E-56 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 SUPERFAMILY SSF50249 2 125 1.27E-47 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.1E-32 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 SMART SM01383 42 118 1.3E-43 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 Gene3D G3DSA:2.30.30.30 118 196 2.5E-30 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 Gene3D G3DSA:2.40.50.140 1 114 6.7E-49 T 12-10-2018 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.774 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 SMART SM01382 124 252 1.5E-90 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PA257_0835 3a8202fe29993bc194e7292d6f7d4d8e 273 SUPERFAMILY SSF50104 127 272 1.32E-60 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 2.7E-41 T 12-10-2018 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 2.7E-41 T 12-10-2018 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 2.7E-41 T 12-10-2018 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 2.7E-41 T 12-10-2018 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 2.7E-41 T 12-10-2018 PA257_0164 0814363f48dbf19592e652cc679213cd 521 Gene3D G3DSA:3.50.50.60 212 507 4.3E-112 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0164 0814363f48dbf19592e652cc679213cd 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 503 2.2E-48 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 Gene3D G3DSA:3.40.30.80 1 199 8.3E-64 T 12-10-2018 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 5.4E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 5.4E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 5.4E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 5.4E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 5.4E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 5.4E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 5.4E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 5.4E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 5.4E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0164 0814363f48dbf19592e652cc679213cd 521 SUPERFAMILY SSF52833 1 100 2.57E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_0164 0814363f48dbf19592e652cc679213cd 521 Gene3D G3DSA:3.50.50.60 326 449 4.3E-112 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0164 0814363f48dbf19592e652cc679213cd 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 2.3E-244 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 PA257_0164 0814363f48dbf19592e652cc679213cd 521 SUPERFAMILY SSF51905 202 513 1.48E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0164 0814363f48dbf19592e652cc679213cd 521 PIRSF PIRSF000238 1 520 6.2E-265 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 PA257_0164 0814363f48dbf19592e652cc679213cd 521 Pfam PF13192 Thioredoxin domain 124 192 2.0E-8 T 12-10-2018 IPR012336 Thioredoxin-like fold PA257_0164 0814363f48dbf19592e652cc679213cd 521 SUPERFAMILY SSF52833 103 196 6.31E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 SUPERFAMILY SSF53474 40 311 9.59E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 8.4E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 257 271 8.4E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 8.4E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 101 8.4E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 Gene3D G3DSA:3.40.50.1820 27 313 3.3E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 145 158 2.2E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 67 85 2.2E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 255 271 2.2E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 131 144 2.2E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 288 310 2.2E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_5022 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 Pfam PF00561 alpha/beta hydrolase fold 61 297 9.9E-21 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 SUPERFAMILY SSF50249 13 151 1.05E-35 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_1521 f8a577d85a5d5041c12b69487373d156 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 1.6E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 1.6E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 1.6E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 1.6E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 382 398 1.6E-37 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 Pfam PF00152 tRNA synthetases class II (D, K and N) 159 497 1.6E-83 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 Gene3D G3DSA:3.30.930.10 153 497 7.5E-134 T 12-10-2018 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 Pfam PF01336 OB-fold nucleic acid binding domain 69 142 2.9E-7 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 Gene3D G3DSA:2.40.50.140 6 152 5.3E-33 T 12-10-2018 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 500 43.686 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 16 500 2.6E-202 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PA257_1521 f8a577d85a5d5041c12b69487373d156 501 SUPERFAMILY SSF55681 158 498 2.03E-123 T 12-10-2018 PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 Gene3D G3DSA:1.10.10.10 194 260 2.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 SMART SM00421 197 254 3.7E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 Gene3D G3DSA:3.30.450.80 24 188 7.8E-15 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 Pfam PF00196 Bacterial regulatory proteins, luxR family 199 253 1.4E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 SUPERFAMILY SSF46894 194 260 5.44E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 230 242 2.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 214 2.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 214 230 2.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 SUPERFAMILY SSF75516 27 190 2.22E-16 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 Pfam PF03472 Autoinducer binding domain 39 180 5.7E-24 T 12-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PA257_4673 3ebe153550aff7b097ea03e2359da76b 262 TIGRFAM TIGR03541 reg_near_HchA: LuxR family transcriptional regulatory, chaperone HchA-associated 24 260 2.8E-109 T 12-10-2018 IPR019941 Transcription regulator LuxR, chaperone HchA-associated PA257_2417 583c28d7c6ccd5eb5dd976f27f05c5a0 608 Gene3D G3DSA:3.30.300.30 470 572 4.2E-14 T 12-10-2018 PA257_2417 583c28d7c6ccd5eb5dd976f27f05c5a0 608 Pfam PF00501 AMP-binding enzyme 48 475 1.1E-57 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_2417 583c28d7c6ccd5eb5dd976f27f05c5a0 608 Gene3D G3DSA:3.40.50.12780 39 468 1.0E-62 T 12-10-2018 PA257_2417 583c28d7c6ccd5eb5dd976f27f05c5a0 608 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_2417 583c28d7c6ccd5eb5dd976f27f05c5a0 608 Pfam PF13193 AMP-binding enzyme C-terminal domain 484 560 2.0E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_2417 583c28d7c6ccd5eb5dd976f27f05c5a0 608 SUPERFAMILY SSF56801 18 572 2.62E-96 T 12-10-2018 PA257_5268 44ac05fccfee140001285000eea21610 1073 Pfam PF00176 SNF2 family N-terminal domain 249 299 5.3E-6 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 PA257_5268 44ac05fccfee140001285000eea21610 1073 SMART SM00490 707 809 3.1E-8 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_5268 44ac05fccfee140001285000eea21610 1073 SUPERFAMILY SSF52540 285 834 1.22E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5268 44ac05fccfee140001285000eea21610 1073 Gene3D G3DSA:3.40.50.10810 235 455 4.2E-24 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PA257_5268 44ac05fccfee140001285000eea21610 1073 Gene3D G3DSA:3.40.50.300 638 836 1.9E-29 T 12-10-2018 PA257_5268 44ac05fccfee140001285000eea21610 1073 Pfam PF00271 Helicase conserved C-terminal domain 689 809 1.0E-11 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_5268 44ac05fccfee140001285000eea21610 1073 SMART SM00487 233 418 2.3E-6 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_3304 f209834afdb5be0a4e703896101cef94 370 Gene3D G3DSA:3.40.50.300 4 221 3.1E-65 T 12-10-2018 PA257_3304 f209834afdb5be0a4e703896101cef94 370 Gene3D G3DSA:2.40.50.140 288 347 1.4E-31 T 12-10-2018 PA257_3304 f209834afdb5be0a4e703896101cef94 370 Pfam PF00005 ABC transporter 20 161 3.9E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3304 f209834afdb5be0a4e703896101cef94 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3304 f209834afdb5be0a4e703896101cef94 370 Gene3D G3DSA:2.40.50.940 222 356 1.4E-31 T 12-10-2018 PA257_3304 f209834afdb5be0a4e703896101cef94 370 SMART SM00382 28 211 1.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3304 f209834afdb5be0a4e703896101cef94 370 Pfam PF08402 TOBE domain 281 355 4.6E-11 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PA257_3304 f209834afdb5be0a4e703896101cef94 370 SUPERFAMILY SSF50331 236 362 1.34E-27 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_3304 f209834afdb5be0a4e703896101cef94 370 SUPERFAMILY SSF52540 4 240 4.62E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5975 593379bc28593faf123018c1e466a9e3 378 Pfam PF00117 Glutamine amidotransferase class-I 197 372 9.9E-47 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_5975 593379bc28593faf123018c1e466a9e3 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 9.5E-144 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.1E-11 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.1E-11 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.1E-11 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.1E-51 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5975 593379bc28593faf123018c1e466a9e3 378 SUPERFAMILY SSF52317 153 377 3.21E-62 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_5975 593379bc28593faf123018c1e466a9e3 378 Gene3D G3DSA:3.40.50.880 152 377 3.7E-75 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_5975 593379bc28593faf123018c1e466a9e3 378 SUPERFAMILY SSF52021 4 144 1.96E-56 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 5.3E-39 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 5.3E-39 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 5.3E-39 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 5.3E-39 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 5.3E-39 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 12-10-2018 PA257_5975 593379bc28593faf123018c1e466a9e3 378 SMART SM01097 3 133 8.9E-92 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5975 593379bc28593faf123018c1e466a9e3 378 Gene3D G3DSA:3.50.30.20 2 151 2.3E-58 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_5975 593379bc28593faf123018c1e466a9e3 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 47.728 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Gene3D G3DSA:3.40.190.10 47 265 3.4E-50 T 12-10-2018 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 SUPERFAMILY SSF47384 562 643 1.26E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 SMART SM00448 831 947 3.4E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 690 802 3.1E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 SUPERFAMILY SSF52172 831 948 5.12E-35 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 SMART SM00062 293 519 5.3E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 SMART SM00062 55 261 4.2E-23 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Pfam PF00072 Response regulator receiver domain 833 947 1.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Gene3D G3DSA:3.30.565.10 643 806 3.4E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 SUPERFAMILY SSF55874 632 802 1.18E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 SMART SM00387 689 804 1.7E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Gene3D G3DSA:3.40.190.10 284 516 3.3E-49 T 12-10-2018 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 788 801 3.5E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 764 782 3.5E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 747 757 3.5E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 729 743 3.5E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 SMART SM00388 576 642 2.7E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Gene3D G3DSA:3.40.50.2300 819 950 3.7E-37 T 12-10-2018 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Pfam PF00512 His Kinase A (phospho-acceptor) domain 577 642 3.4E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 SUPERFAMILY SSF53850 289 516 1.34E-24 T 12-10-2018 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 61 253 1.9E-18 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Gene3D G3DSA:1.10.287.130 563 642 3.0E-19 T 12-10-2018 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 308 516 1.0E-16 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 SUPERFAMILY SSF53850 56 255 2.34E-28 T 12-10-2018 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Gene3D G3DSA:3.40.190.10 137 228 3.4E-50 T 12-10-2018 PA257_2979 791bb69c20046c209c773dfeb9c95bab 961 Gene3D G3DSA:3.40.190.10 378 479 3.3E-49 T 12-10-2018 PA257_3022 7bb9e93769818cdd0d4f6880844ce476 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3022 7bb9e93769818cdd0d4f6880844ce476 301 SUPERFAMILY SSF53850 88 294 2.9E-47 T 12-10-2018 PA257_3022 7bb9e93769818cdd0d4f6880844ce476 301 Pfam PF03466 LysR substrate binding domain 87 292 1.0E-47 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3022 7bb9e93769818cdd0d4f6880844ce476 301 Gene3D G3DSA:3.40.190.10 91 290 3.9E-66 T 12-10-2018 PA257_3022 7bb9e93769818cdd0d4f6880844ce476 301 Gene3D G3DSA:1.10.10.10 3 90 2.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3022 7bb9e93769818cdd0d4f6880844ce476 301 Gene3D G3DSA:3.40.190.10 164 265 3.9E-66 T 12-10-2018 PA257_3022 7bb9e93769818cdd0d4f6880844ce476 301 SUPERFAMILY SSF46785 4 111 2.4E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1528 1d72fded0259809e5a1b7d7039a450d6 173 SMART SM00506 3 132 4.3E-51 T 12-10-2018 IPR002589 Macro domain PA257_1528 1d72fded0259809e5a1b7d7039a450d6 173 Pfam PF01661 Macro domain 20 132 1.6E-43 T 12-10-2018 IPR002589 Macro domain PA257_1528 1d72fded0259809e5a1b7d7039a450d6 173 Gene3D G3DSA:3.40.220.10 1 171 8.3E-71 T 12-10-2018 PA257_1528 1d72fded0259809e5a1b7d7039a450d6 173 SUPERFAMILY SSF52949 3 167 3.53E-63 T 12-10-2018 PA257_2582 3b27b10ddbcb0993db806be5e4d21cd2 204 ProSitePatterns PS00398 Site-specific recombinases signature 2. 59 71 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PA257_2582 3b27b10ddbcb0993db806be5e4d21cd2 204 SUPERFAMILY SSF46689 145 187 1.33E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2582 3b27b10ddbcb0993db806be5e4d21cd2 204 SUPERFAMILY SSF53041 1 142 8.37E-41 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PA257_2582 3b27b10ddbcb0993db806be5e4d21cd2 204 Pfam PF00239 Resolvase, N terminal domain 3 143 1.0E-41 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_2582 3b27b10ddbcb0993db806be5e4d21cd2 204 Gene3D G3DSA:3.40.50.1390 1 132 6.8E-43 T 12-10-2018 PA257_2582 3b27b10ddbcb0993db806be5e4d21cd2 204 SMART SM00857 2 143 2.3E-53 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_5394 9f87d000100a87f19cffe7a1ec6d0f87 257 Gene3D G3DSA:1.10.12.10 199 255 4.2E-12 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PA257_5394 9f87d000100a87f19cffe7a1ec6d0f87 257 Gene3D G3DSA:3.90.226.10 1 197 2.1E-59 T 12-10-2018 PA257_5394 9f87d000100a87f19cffe7a1ec6d0f87 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 254 5.5E-49 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_5394 9f87d000100a87f19cffe7a1ec6d0f87 257 SUPERFAMILY SSF52096 1 254 4.55E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_2456 55da9863680e6fc9fe3728628763298a 201 Gene3D G3DSA:3.40.50.1110 22 201 5.8E-77 T 12-10-2018 IPR036514 SGNH hydrolase superfamily PA257_2456 55da9863680e6fc9fe3728628763298a 201 SUPERFAMILY SSF52266 23 200 3.21E-48 T 12-10-2018 PA257_2456 55da9863680e6fc9fe3728628763298a 201 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 182 1.5E-23 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 682 691 3.6E-12 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 579 589 3.6E-12 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 786 802 3.6E-12 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 654 661 3.6E-12 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 718 737 3.6E-12 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 809 817 3.6E-12 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 742 751 3.6E-12 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 SUPERFAMILY SSF63380 539 709 2.11E-24 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 Pfam PF00175 Oxidoreductase NAD-binding domain 719 823 5.6E-11 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 Gene3D G3DSA:3.40.50.360 364 535 7.8E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 Pfam PF00258 Flavodoxin 393 522 5.9E-25 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 Gene3D G3DSA:3.40.50.80 708 850 7.8E-38 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 SUPERFAMILY SSF52218 388 531 8.6E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 Pfam PF03929 PepSY-associated TM region 6 366 8.7E-67 T 12-10-2018 IPR005625 PepSY-associated TM protein PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 PRINTS PR00369 Flavodoxin signature 471 481 5.4E-6 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 PRINTS PR00369 Flavodoxin signature 392 405 5.4E-6 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 PRINTS PR00369 Flavodoxin signature 440 451 5.4E-6 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PA257_5584 e525452b3089ecfec873ea2d5c1f4ecb 850 SUPERFAMILY SSF52343 707 850 3.67E-36 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_5502 ac69f5f6c5cebf8c20b611f1041c6181 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_5502 ac69f5f6c5cebf8c20b611f1041c6181 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_5502 ac69f5f6c5cebf8c20b611f1041c6181 378 Gene3D G3DSA:1.10.540.10 1 121 2.8E-40 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_5502 ac69f5f6c5cebf8c20b611f1041c6181 378 Gene3D G3DSA:2.40.110.10 122 235 1.5E-44 T 12-10-2018 PA257_5502 ac69f5f6c5cebf8c20b611f1041c6181 378 SUPERFAMILY SSF56645 5 242 6.68E-92 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_5502 ac69f5f6c5cebf8c20b611f1041c6181 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 1.0E-45 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_5502 ac69f5f6c5cebf8c20b611f1041c6181 378 SUPERFAMILY SSF47203 230 378 7.09E-52 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_5502 ac69f5f6c5cebf8c20b611f1041c6181 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 9.3E-37 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_5502 ac69f5f6c5cebf8c20b611f1041c6181 378 Gene3D G3DSA:1.20.140.10 236 378 2.4E-48 T 12-10-2018 PA257_5502 ac69f5f6c5cebf8c20b611f1041c6181 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 1.7E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_0921 5a81f49fe741b36586e69e58d57f3a04 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 258 4.7E-70 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PA257_0921 5a81f49fe741b36586e69e58d57f3a04 266 SUPERFAMILY SSF56219 4 258 3.66E-79 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_0921 5a81f49fe741b36586e69e58d57f3a04 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 251 1.0E-20 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PA257_0921 5a81f49fe741b36586e69e58d57f3a04 266 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 30 39 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PA257_0921 5a81f49fe741b36586e69e58d57f3a04 266 Gene3D G3DSA:3.60.10.10 4 259 2.7E-72 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_0921 5a81f49fe741b36586e69e58d57f3a04 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 257 1.9E-70 T 12-10-2018 PA257_6373 b15cdaa089873c05ab01301cb1fabc6a 158 SUPERFAMILY SSF55811 5 133 8.53E-20 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_6373 b15cdaa089873c05ab01301cb1fabc6a 158 Gene3D G3DSA:3.90.79.10 2 145 1.7E-23 T 12-10-2018 PA257_6373 b15cdaa089873c05ab01301cb1fabc6a 158 Pfam PF00293 NUDIX domain 9 127 2.3E-11 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_0406 3a2ef5c54287e3988be77449b9f4fffd 413 Gene3D G3DSA:1.20.1250.20 7 405 6.8E-32 T 12-10-2018 PA257_0406 3a2ef5c54287e3988be77449b9f4fffd 413 Pfam PF07690 Major Facilitator Superfamily 17 271 3.3E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0406 3a2ef5c54287e3988be77449b9f4fffd 413 PRINTS PR01035 Tetracycline resistance protein signature 139 161 1.5E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_0406 3a2ef5c54287e3988be77449b9f4fffd 413 PRINTS PR01035 Tetracycline resistance protein signature 318 338 1.5E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_0406 3a2ef5c54287e3988be77449b9f4fffd 413 PRINTS PR01035 Tetracycline resistance protein signature 50 69 1.5E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_0406 3a2ef5c54287e3988be77449b9f4fffd 413 SUPERFAMILY SSF103473 12 401 5.23E-34 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_2971 51e79ce00b17ea46ddbe3b4a8c606178 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 7.3E-20 T 12-10-2018 PA257_2971 51e79ce00b17ea46ddbe3b4a8c606178 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 143 158 7.3E-20 T 12-10-2018 PA257_2971 51e79ce00b17ea46ddbe3b4a8c606178 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 304 7.3E-20 T 12-10-2018 PA257_2971 51e79ce00b17ea46ddbe3b4a8c606178 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 273 288 7.3E-20 T 12-10-2018 PA257_2971 51e79ce00b17ea46ddbe3b4a8c606178 382 Pfam PF01494 FAD binding domain 2 306 7.9E-19 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 PA257_2971 51e79ce00b17ea46ddbe3b4a8c606178 382 SUPERFAMILY SSF51905 2 362 1.04E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2971 51e79ce00b17ea46ddbe3b4a8c606178 382 Gene3D G3DSA:3.50.50.60 2 363 2.1E-71 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1684 5c12f13d03ef2b6f4d2be3dcd2156a3b 253 SUPERFAMILY SSF52096 2 251 1.49E-84 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_1684 5c12f13d03ef2b6f4d2be3dcd2156a3b 253 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 94 114 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PA257_1684 5c12f13d03ef2b6f4d2be3dcd2156a3b 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 250 1.7E-69 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_1684 5c12f13d03ef2b6f4d2be3dcd2156a3b 253 Gene3D G3DSA:1.10.12.10 196 252 1.2E-22 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PA257_1684 5c12f13d03ef2b6f4d2be3dcd2156a3b 253 Gene3D G3DSA:3.90.226.10 1 195 4.0E-69 T 12-10-2018 PA257_5110 38cc00a7ec4f736b2784af4e77e9e71e 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 20 256 1.0E-49 T 12-10-2018 PA257_5110 38cc00a7ec4f736b2784af4e77e9e71e 298 SUPERFAMILY SSF51621 8 292 2.02E-100 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_5110 38cc00a7ec4f736b2784af4e77e9e71e 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 6 294 50.146 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 PA257_5110 38cc00a7ec4f736b2784af4e77e9e71e 298 ProSitePatterns PS00161 Isocitrate lyase signature. 123 128 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 PA257_5110 38cc00a7ec4f736b2784af4e77e9e71e 298 Gene3D G3DSA:3.20.20.60 6 298 1.1E-104 T 12-10-2018 PA257_5110 38cc00a7ec4f736b2784af4e77e9e71e 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 9 293 8.3E-133 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 PA257_6798 7c51514225cff7b2498fbf17afcc2c6e 68 SUPERFAMILY SSF47413 1 65 1.47E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_6798 7c51514225cff7b2498fbf17afcc2c6e 68 Gene3D G3DSA:1.10.260.40 1 64 1.9E-10 T 12-10-2018 PA257_6798 7c51514225cff7b2498fbf17afcc2c6e 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 67 2.5E-23 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_6798 7c51514225cff7b2498fbf17afcc2c6e 68 SMART SM00530 5 61 1.5E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_4640 ddd3ec0829ec420cb3284efa4676654b 223 SUPERFAMILY SSF49899 3 222 7.91E-76 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PA257_4640 ddd3ec0829ec420cb3284efa4676654b 223 Pfam PF08787 Alginate lyase 3 222 2.3E-52 T 12-10-2018 IPR014895 Alginate lyase 2 PA257_4640 ddd3ec0829ec420cb3284efa4676654b 223 Gene3D G3DSA:2.60.120.200 2 223 5.0E-73 T 12-10-2018 PA257_1043 f1df220e5e5ec4045839a646b52d3f54 291 Gene3D G3DSA:3.40.190.10 98 280 6.7E-62 T 12-10-2018 PA257_1043 f1df220e5e5ec4045839a646b52d3f54 291 Gene3D G3DSA:3.40.190.10 158 254 6.7E-62 T 12-10-2018 PA257_1043 f1df220e5e5ec4045839a646b52d3f54 291 SUPERFAMILY SSF53850 80 285 4.89E-35 T 12-10-2018 PA257_1043 f1df220e5e5ec4045839a646b52d3f54 291 Pfam PF03466 LysR substrate binding domain 87 284 1.0E-35 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1043 f1df220e5e5ec4045839a646b52d3f54 291 Gene3D G3DSA:1.10.10.10 1 88 9.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1043 f1df220e5e5ec4045839a646b52d3f54 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.0E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1043 f1df220e5e5ec4045839a646b52d3f54 291 SUPERFAMILY SSF46785 2 82 2.4E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1043 f1df220e5e5ec4045839a646b52d3f54 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1043 f1df220e5e5ec4045839a646b52d3f54 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1043 f1df220e5e5ec4045839a646b52d3f54 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SMART SM00091 15 84 1.4 T 12-10-2018 IPR000014 PAS domain PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SMART SM00091 143 212 4.3E-6 T 12-10-2018 IPR000014 PAS domain PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 Pfam PF13426 PAS domain 31 130 9.9E-11 T 12-10-2018 IPR000014 PAS domain PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 Pfam PF13426 PAS domain 156 257 1.6E-15 T 12-10-2018 IPR000014 PAS domain PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 Gene3D G3DSA:3.40.50.2300 533 649 1.1E-18 T 12-10-2018 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 266 1.6E-25 T 12-10-2018 IPR000014 PAS domain PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 138 6.7E-15 T 12-10-2018 IPR000014 PAS domain PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SMART SM00387 388 508 1.5E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 Gene3D G3DSA:3.30.565.10 348 513 2.3E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 2.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 465 2.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 2.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 2.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 505 3.7E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 Gene3D G3DSA:3.30.450.20 145 277 1.4E-31 T 12-10-2018 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 Gene3D G3DSA:3.30.450.20 12 144 1.2E-22 T 12-10-2018 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 Pfam PF00072 Response regulator receiver domain 537 620 1.0E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 345 1.1E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SUPERFAMILY SSF55785 127 254 2.62E-29 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SMART SM00086 217 259 6.3E-4 T 12-10-2018 IPR001610 PAC motif PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SMART SM00086 89 131 1.9 T 12-10-2018 IPR001610 PAC motif PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SUPERFAMILY SSF52172 535 647 9.68E-21 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 Gene3D G3DSA:1.10.287.130 278 346 1.2E-21 T 12-10-2018 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SUPERFAMILY SSF55874 338 508 3.8E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SUPERFAMILY SSF55785 28 140 4.05E-19 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SMART SM00388 281 347 6.3E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SUPERFAMILY SSF47384 266 344 4.51E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_3548 8289e79f0e9904baa11106e80fa23e1d 650 SMART SM00448 535 643 4.0E-9 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3916 94766eed780c84418f840212ae20017a 346 SUPERFAMILY SSF102114 100 303 7.85E-12 T 12-10-2018 PA257_3916 94766eed780c84418f840212ae20017a 346 Pfam PF04055 Radical SAM superfamily 102 261 9.6E-11 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_3916 94766eed780c84418f840212ae20017a 346 Gene3D G3DSA:3.20.20.70 65 319 5.6E-68 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_3916 94766eed780c84418f840212ae20017a 346 PIRSF PIRSF006004 1 346 7.2E-97 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 PA257_1064 b739ff7e0dad6f2e3e00b32a3e0930cf 844 Pfam PF13954 PapC N-terminal domain 19 172 4.5E-36 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 PA257_1064 b739ff7e0dad6f2e3e00b32a3e0930cf 844 Pfam PF00577 Outer membrane usher protein 187 743 8.7E-156 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 PA257_1064 b739ff7e0dad6f2e3e00b32a3e0930cf 844 SUPERFAMILY SSF141729 17 145 1.57E-23 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 PA257_1064 b739ff7e0dad6f2e3e00b32a3e0930cf 844 Gene3D G3DSA:2.60.40.2610 661 750 2.2E-26 T 12-10-2018 PA257_1064 b739ff7e0dad6f2e3e00b32a3e0930cf 844 Gene3D G3DSA:2.60.40.2070 753 842 4.2E-14 T 12-10-2018 PA257_1064 b739ff7e0dad6f2e3e00b32a3e0930cf 844 Pfam PF13953 PapC C-terminal domain 754 818 1.0E-18 T 12-10-2018 IPR025949 PapC-like, C-terminal domain PA257_1064 b739ff7e0dad6f2e3e00b32a3e0930cf 844 Gene3D G3DSA:3.10.20.410 17 148 1.3E-22 T 12-10-2018 PA257_1064 b739ff7e0dad6f2e3e00b32a3e0930cf 844 Gene3D G3DSA:2.60.40.3110 257 346 2.6E-34 T 12-10-2018 PA257_2074 432bb227c9f96a93c5cfd063e14710b9 297 Pfam PF00892 EamA-like transporter family 147 277 3.0E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_2074 432bb227c9f96a93c5cfd063e14710b9 297 Pfam PF00892 EamA-like transporter family 12 135 2.8E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_2074 432bb227c9f96a93c5cfd063e14710b9 297 SUPERFAMILY SSF103481 38 136 6.8E-9 T 12-10-2018 PA257_2074 432bb227c9f96a93c5cfd063e14710b9 297 SUPERFAMILY SSF103481 181 281 8.11E-18 T 12-10-2018 PA257_3766 f63e7f7cb7a1650b4aec577e6cb63a86 387 Pfam PF08495 FIST N domain 37 233 2.0E-33 T 12-10-2018 IPR013702 FIST domain, N-terminal PA257_3766 f63e7f7cb7a1650b4aec577e6cb63a86 387 SMART SM01204 236 366 3.6E-29 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 PA257_3766 f63e7f7cb7a1650b4aec577e6cb63a86 387 Pfam PF10442 FIST C domain 238 364 7.3E-12 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 PA257_3766 f63e7f7cb7a1650b4aec577e6cb63a86 387 SMART SM00897 34 235 1.4E-60 T 12-10-2018 IPR013702 FIST domain, N-terminal PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 Gene3D G3DSA:1.25.60.10 34 162 7.9E-18 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 Gene3D G3DSA:1.10.357.20 305 482 9.7E-47 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF03448 MgtE intracellular N domain 64 165 1.5E-25 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 SMART SM00924 64 167 1.3E-35 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 Gene3D G3DSA:3.10.580.10 163 290 6.3E-43 T 12-10-2018 PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 SUPERFAMILY SSF54631 167 305 6.6E-29 T 12-10-2018 PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 SUPERFAMILY SSF158791 41 164 2.22E-28 T 12-10-2018 PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF01769 Divalent cation transporter 351 474 1.6E-26 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 SUPERFAMILY SSF161093 308 481 5.49E-48 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF00571 CBS domain 167 223 5.4E-4 T 12-10-2018 IPR000644 CBS domain PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF00571 CBS domain 233 285 8.9E-7 T 12-10-2018 IPR000644 CBS domain PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 SMART SM00116 238 286 6.4E-5 T 12-10-2018 IPR000644 CBS domain PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 SMART SM00116 174 227 2.7 T 12-10-2018 IPR000644 CBS domain PA257_4929 d5faef30d783b38cd1652e60568cfe4a 482 TIGRFAM TIGR00400 mgtE: magnesium transporter 44 481 3.5E-85 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 PA257_2055 98120d9a164655b78d9bc25d2e1ddea7 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 1.7E-33 T 12-10-2018 IPR007436 Protein of unknown function DUF485 PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Pfam PF00561 alpha/beta hydrolase fold 133 355 1.0E-25 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Gene3D G3DSA:3.40.50.1820 103 370 2.3E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Gene3D G3DSA:2.40.50.100 1 101 3.7E-22 T 12-10-2018 PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Pfam PF00364 Biotin-requiring enzyme 6 76 2.8E-14 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 173 8.3E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 215 8.3E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 229 8.3E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 318 332 8.3E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 SUPERFAMILY SSF53474 111 369 3.08E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0942 e6b2813c875b7abadfe54c9a0ecd0ab3 370 SUPERFAMILY SSF51230 3 92 2.36E-21 T 12-10-2018 IPR011053 Single hybrid motif PA257_6390 f9e512cf0e904c71ef8f1a7d97f7ef1f 480 PIRSF PIRSF002744 1 464 3.6E-100 T 12-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PA257_6390 f9e512cf0e904c71ef8f1a7d97f7ef1f 480 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 18 440 6.4E-46 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 PA257_6390 f9e512cf0e904c71ef8f1a7d97f7ef1f 480 Gene3D G3DSA:1.10.4160.10 7 461 4.6E-43 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 Gene3D G3DSA:3.30.450.20 6 136 5.1E-25 T 12-10-2018 PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 SUPERFAMILY SSF55785 21 114 3.32E-26 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 111 3.0E-12 T 12-10-2018 IPR000014 PAS domain PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 487 6.0E-47 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 Gene3D G3DSA:1.10.287.950 230 521 7.2E-70 T 12-10-2018 PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 SUPERFAMILY SSF58104 241 521 4.58E-75 T 12-10-2018 PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 SMART SM00283 259 520 1.0E-80 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 279 308 8.4E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 8.4E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 8.4E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4225 2c270482eac7be0f3c0163b8a55560d5 521 Pfam PF08447 PAS fold 31 113 2.0E-15 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_6305 3e025d32a308f49db66da50c382c168a 547 Pfam PF00364 Biotin-requiring enzyme 121 192 1.8E-23 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_6305 3e025d32a308f49db66da50c382c168a 547 Pfam PF00364 Biotin-requiring enzyme 5 74 3.5E-23 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_6305 3e025d32a308f49db66da50c382c168a 547 SUPERFAMILY SSF52777 306 547 1.25E-79 T 12-10-2018 PA257_6305 3e025d32a308f49db66da50c382c168a 547 Gene3D G3DSA:3.30.559.10 305 547 5.0E-95 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_6305 3e025d32a308f49db66da50c382c168a 547 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 143 172 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PA257_6305 3e025d32a308f49db66da50c382c168a 547 Gene3D G3DSA:2.40.50.100 2 79 1.4E-23 T 12-10-2018 PA257_6305 3e025d32a308f49db66da50c382c168a 547 Gene3D G3DSA:2.40.50.100 120 197 3.2E-20 T 12-10-2018 PA257_6305 3e025d32a308f49db66da50c382c168a 547 SUPERFAMILY SSF51230 5 93 6.15E-23 T 12-10-2018 IPR011053 Single hybrid motif PA257_6305 3e025d32a308f49db66da50c382c168a 547 SUPERFAMILY SSF47005 242 286 4.97E-12 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PA257_6305 3e025d32a308f49db66da50c382c168a 547 Pfam PF02817 e3 binding domain 247 282 5.6E-15 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 PA257_6305 3e025d32a308f49db66da50c382c168a 547 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 318 546 2.8E-76 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 PA257_6305 3e025d32a308f49db66da50c382c168a 547 Gene3D G3DSA:4.10.320.10 247 292 1.6E-19 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PA257_6305 3e025d32a308f49db66da50c382c168a 547 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PA257_6305 3e025d32a308f49db66da50c382c168a 547 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 4 547 4.2E-266 T 12-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 PA257_6305 3e025d32a308f49db66da50c382c168a 547 SUPERFAMILY SSF51230 118 212 1.03E-22 T 12-10-2018 IPR011053 Single hybrid motif PA257_1279 86b0915ee32947c69b9bf43e14e591f6 299 Pfam PF13242 HAD-hyrolase-like 210 270 6.8E-8 T 12-10-2018 PA257_1279 86b0915ee32947c69b9bf43e14e591f6 299 SUPERFAMILY SSF56784 30 268 8.74E-36 T 12-10-2018 IPR036412 HAD-like superfamily PA257_1279 86b0915ee32947c69b9bf43e14e591f6 299 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 34 259 7.9E-56 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PA257_1279 86b0915ee32947c69b9bf43e14e591f6 299 Gene3D G3DSA:3.40.50.1000 111 210 2.4E-38 T 12-10-2018 IPR023214 HAD superfamily PA257_1279 86b0915ee32947c69b9bf43e14e591f6 299 Pfam PF13344 Haloacid dehalogenase-like hydrolase 34 118 1.4E-9 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PA257_1279 86b0915ee32947c69b9bf43e14e591f6 299 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 24 259 4.6E-108 T 12-10-2018 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 PA257_1279 86b0915ee32947c69b9bf43e14e591f6 299 Gene3D G3DSA:3.40.50.1000 32 257 2.4E-38 T 12-10-2018 IPR023214 HAD superfamily PA257_3504 d722d5f007491c3ab15c0131e316f863 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 9.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3504 d722d5f007491c3ab15c0131e316f863 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 9.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3504 d722d5f007491c3ab15c0131e316f863 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 9.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3504 d722d5f007491c3ab15c0131e316f863 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 9.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3504 d722d5f007491c3ab15c0131e316f863 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3504 d722d5f007491c3ab15c0131e316f863 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 9.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3504 d722d5f007491c3ab15c0131e316f863 255 Gene3D G3DSA:3.40.50.720 1 253 1.6E-75 T 12-10-2018 PA257_3504 d722d5f007491c3ab15c0131e316f863 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 249 1.4E-54 T 12-10-2018 PA257_3504 d722d5f007491c3ab15c0131e316f863 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3504 d722d5f007491c3ab15c0131e316f863 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3504 d722d5f007491c3ab15c0131e316f863 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3504 d722d5f007491c3ab15c0131e316f863 255 SUPERFAMILY SSF51735 12 250 3.23E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6808 fa5b7992cb40c78b49506dbcb864e605 346 Gene3D G3DSA:3.40.640.10 17 255 4.4E-126 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6808 fa5b7992cb40c78b49506dbcb864e605 346 Pfam PF01212 Beta-eliminating lyase 7 297 1.2E-79 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 PA257_6808 fa5b7992cb40c78b49506dbcb864e605 346 SUPERFAMILY SSF53383 7 341 1.9E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6808 fa5b7992cb40c78b49506dbcb864e605 346 PIRSF PIRSF038940 5 346 6.0E-138 T 12-10-2018 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 PA257_6808 fa5b7992cb40c78b49506dbcb864e605 346 Gene3D G3DSA:3.90.1150.10 10 335 4.4E-126 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_4469 e71e3026872b40f9efbdf595cdf7377e 515 Gene3D G3DSA:3.40.50.1100 25 328 1.8E-134 T 12-10-2018 PA257_4469 e71e3026872b40f9efbdf595cdf7377e 515 SUPERFAMILY SSF53686 16 366 1.7E-103 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_4469 e71e3026872b40f9efbdf595cdf7377e 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PA257_4469 e71e3026872b40f9efbdf595cdf7377e 515 SUPERFAMILY SSF55021 421 513 2.75E-27 T 12-10-2018 PA257_4469 e71e3026872b40f9efbdf595cdf7377e 515 Gene3D G3DSA:3.40.50.1100 61 157 1.8E-134 T 12-10-2018 PA257_4469 e71e3026872b40f9efbdf595cdf7377e 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 1.2E-81 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_4469 e71e3026872b40f9efbdf595cdf7377e 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 513 2.5E-241 T 12-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PA257_4469 e71e3026872b40f9efbdf595cdf7377e 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 9.5E-24 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PA257_4469 e71e3026872b40f9efbdf595cdf7377e 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 430 513 2.7E-25 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PA257_4469 e71e3026872b40f9efbdf595cdf7377e 515 Gene3D G3DSA:3.40.1020.10 339 515 2.4E-72 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PA257_1420 baf90e7c90be965b7681affc3c2e118d 212 SUPERFAMILY SSF52540 1 210 2.41E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1420 baf90e7c90be965b7681affc3c2e118d 212 PIRSF PIRSF009320 1 210 3.1E-50 T 12-10-2018 PA257_1420 baf90e7c90be965b7681affc3c2e118d 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 184 6.6E-15 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PA257_1420 baf90e7c90be965b7681affc3c2e118d 212 Gene3D G3DSA:3.40.50.300 1 209 2.7E-48 T 12-10-2018 PA257_4512 476454ab30b3338a9a4bf0997c3eae46 399 Pfam PF07690 Major Facilitator Superfamily 14 312 1.1E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4512 476454ab30b3338a9a4bf0997c3eae46 399 SUPERFAMILY SSF103473 3 388 1.26E-54 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4512 476454ab30b3338a9a4bf0997c3eae46 399 Gene3D G3DSA:1.20.1250.20 2 391 1.9E-49 T 12-10-2018 PA257_1922 14c07160008d73babc57b21587ee8d3b 251 Gene3D G3DSA:2.30.110.10 13 126 1.4E-44 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PA257_1922 14c07160008d73babc57b21587ee8d3b 251 Pfam PF07317 Flagellar regulator YcgR 19 123 6.5E-26 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal PA257_1922 14c07160008d73babc57b21587ee8d3b 251 Gene3D G3DSA:2.40.10.220 127 241 1.2E-28 T 12-10-2018 PA257_1922 14c07160008d73babc57b21587ee8d3b 251 Pfam PF07238 PilZ domain 126 237 1.4E-8 T 12-10-2018 IPR009875 PilZ domain GO:0035438 PA257_4274 8e5562d96fb9042b6c4a70e1c5399fed 171 SUPERFAMILY SSF158694 11 171 1.44E-52 T 12-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 PA257_4274 8e5562d96fb9042b6c4a70e1c5399fed 171 Pfam PF09349 OHCU decarboxylase 11 169 9.6E-46 T 12-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 PA257_4274 8e5562d96fb9042b6c4a70e1c5399fed 171 Gene3D G3DSA:1.10.3330.10 11 171 1.0E-60 T 12-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 PA257_4274 8e5562d96fb9042b6c4a70e1c5399fed 171 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 13 171 6.6E-69 T 12-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 PA257_5577 6260528cafee6c152dc5773d9877034e 323 SUPERFAMILY SSF52540 5 253 4.71E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5577 6260528cafee6c152dc5773d9877034e 323 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_5577 6260528cafee6c152dc5773d9877034e 323 Pfam PF00005 ABC transporter 30 182 1.6E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_5577 6260528cafee6c152dc5773d9877034e 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 8.5E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PA257_5577 6260528cafee6c152dc5773d9877034e 323 SMART SM00382 39 231 7.8E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5577 6260528cafee6c152dc5773d9877034e 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 316 3.8E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PA257_5577 6260528cafee6c152dc5773d9877034e 323 Gene3D G3DSA:3.40.50.300 1 322 1.9E-100 T 12-10-2018 PA257_0343 f1a7210dd517d7f8cffcfbc49a0acfdb 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 7.5E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_0343 f1a7210dd517d7f8cffcfbc49a0acfdb 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 7.5E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_0343 f1a7210dd517d7f8cffcfbc49a0acfdb 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 7.5E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_0343 f1a7210dd517d7f8cffcfbc49a0acfdb 232 SUPERFAMILY SSF46785 9 86 5.45E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0343 f1a7210dd517d7f8cffcfbc49a0acfdb 232 Gene3D G3DSA:1.10.10.10 6 94 6.0E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0343 f1a7210dd517d7f8cffcfbc49a0acfdb 232 Pfam PF12840 Helix-turn-helix domain 10 68 1.4E-7 T 12-10-2018 PA257_0343 f1a7210dd517d7f8cffcfbc49a0acfdb 232 SMART SM00418 9 88 1.6E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_4405 b6cdc82d82cb5755c00e70fea3c568e4 590 Pfam PF00534 Glycosyl transferases group 1 323 492 2.9E-28 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_4405 b6cdc82d82cb5755c00e70fea3c568e4 590 Gene3D G3DSA:3.40.50.2000 157 500 2.7E-50 T 12-10-2018 PA257_4405 b6cdc82d82cb5755c00e70fea3c568e4 590 Gene3D G3DSA:3.40.50.2000 309 498 2.7E-50 T 12-10-2018 PA257_4405 b6cdc82d82cb5755c00e70fea3c568e4 590 SUPERFAMILY SSF53756 148 514 3.84E-63 T 12-10-2018 PA257_5739 0f99b2ba4f548c4219b86f4f7d705ddb 91 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.91 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5739 0f99b2ba4f548c4219b86f4f7d705ddb 91 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 85 7.8E-30 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5739 0f99b2ba4f548c4219b86f4f7d705ddb 91 Gene3D G3DSA:1.20.58.110 1 87 1.4E-30 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5739 0f99b2ba4f548c4219b86f4f7d705ddb 91 SUPERFAMILY SSF46992 3 86 3.14E-33 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5739 0f99b2ba4f548c4219b86f4f7d705ddb 91 Pfam PF01649 Ribosomal protein S20 2 84 8.0E-29 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5739 0f99b2ba4f548c4219b86f4f7d705ddb 91 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 19 91 6.0E-35 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_3074 32479fa422eb674c0ed85b804d141b5a 151 Pfam PF14437 MafB19-like deaminase 2 111 1.3E-21 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 PA257_3074 32479fa422eb674c0ed85b804d141b5a 151 Gene3D G3DSA:3.40.140.10 1 151 5.1E-50 T 12-10-2018 PA257_3074 32479fa422eb674c0ed85b804d141b5a 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PA257_3074 32479fa422eb674c0ed85b804d141b5a 151 SUPERFAMILY SSF53927 2 127 7.13E-41 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PA257_1838 40aac18d72c2f79b14b99ed7d539a336 297 Gene3D G3DSA:1.10.10.10 1 91 3.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1838 40aac18d72c2f79b14b99ed7d539a336 297 SUPERFAMILY SSF53850 90 290 8.91E-41 T 12-10-2018 PA257_1838 40aac18d72c2f79b14b99ed7d539a336 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1838 40aac18d72c2f79b14b99ed7d539a336 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1838 40aac18d72c2f79b14b99ed7d539a336 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1838 40aac18d72c2f79b14b99ed7d539a336 297 Pfam PF03466 LysR substrate binding domain 87 290 5.4E-45 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1838 40aac18d72c2f79b14b99ed7d539a336 297 SUPERFAMILY SSF46785 1 86 3.76E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1838 40aac18d72c2f79b14b99ed7d539a336 297 Gene3D G3DSA:3.40.190.290 92 294 3.4E-48 T 12-10-2018 PA257_1838 40aac18d72c2f79b14b99ed7d539a336 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.1E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1449 9683d2c1ad4be06562bc64d637712163 182 Pfam PF14437 MafB19-like deaminase 30 173 3.1E-30 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 PA257_1449 9683d2c1ad4be06562bc64d637712163 182 Gene3D G3DSA:3.40.140.10 17 182 2.1E-59 T 12-10-2018 PA257_1449 9683d2c1ad4be06562bc64d637712163 182 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 32 173 46.038 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 PA257_1449 9683d2c1ad4be06562bc64d637712163 182 SUPERFAMILY SSF53927 26 177 3.51E-55 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PA257_1449 9683d2c1ad4be06562bc64d637712163 182 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 114 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PA257_5496 93bc7cc205aae3c855b3ea9a148904c0 260 Gene3D G3DSA:1.10.760.10 31 225 3.1E-13 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5496 93bc7cc205aae3c855b3ea9a148904c0 260 SUPERFAMILY SSF46626 16 223 1.5E-45 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5496 93bc7cc205aae3c855b3ea9a148904c0 260 Pfam PF02167 Cytochrome C1 family 91 259 7.5E-10 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PA257_0976 2bdb7e375f77dc52a41837c3b53bf311 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 269 280 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_0976 2bdb7e375f77dc52a41837c3b53bf311 486 Pfam PF00171 Aldehyde dehydrogenase family 13 472 1.5E-174 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_0976 2bdb7e375f77dc52a41837c3b53bf311 486 Gene3D G3DSA:3.40.605.10 17 472 3.1E-181 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_0976 2bdb7e375f77dc52a41837c3b53bf311 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 241 248 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_0976 2bdb7e375f77dc52a41837c3b53bf311 486 SUPERFAMILY SSF53720 2 478 5.37E-171 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_0976 2bdb7e375f77dc52a41837c3b53bf311 486 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 2 485 6.3E-224 T 12-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 PA257_0976 2bdb7e375f77dc52a41837c3b53bf311 486 Gene3D G3DSA:3.40.309.10 247 443 3.1E-181 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 Gene3D G3DSA:3.40.50.620 177 387 6.1E-49 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 484 206.706 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 178 370 1.8E-64 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 SUPERFAMILY SSF52402 181 374 2.14E-38 T 12-10-2018 PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 SMART SM00981 77 167 5.1E-24 T 12-10-2018 IPR004114 THUMP domain GO:0003723 PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 371 7.2E-106 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 SUPERFAMILY SSF143437 1 175 2.79E-48 T 12-10-2018 PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 Gene3D G3DSA:3.40.250.10 394 483 1.5E-6 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 SUPERFAMILY SSF52821 397 482 5.63E-8 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 Gene3D G3DSA:3.30.2130.30 1 176 1.3E-35 T 12-10-2018 PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 Pfam PF02926 THUMP domain 29 166 9.5E-21 T 12-10-2018 IPR004114 THUMP domain GO:0003723 PA257_6409 d8a7ac9da34ca10778eedcf08ce17293 484 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 386 483 7.1E-36 T 12-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 PA257_6607 8a9fe1bacc55e718f43cdf1542525cc0 159 Pfam PF09523 Protein of unknown function (DUF2390) 5 110 2.2E-32 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 PA257_6607 8a9fe1bacc55e718f43cdf1542525cc0 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 4 113 1.7E-29 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 PA257_5854 ad32348b69bfa08a6b413f0177c9fbb2 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 200 27.01 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PA257_5854 ad32348b69bfa08a6b413f0177c9fbb2 205 SUPERFAMILY SSF89392 17 200 1.1E-50 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX PA257_5854 ad32348b69bfa08a6b413f0177c9fbb2 205 Gene3D G3DSA:2.50.20.10 28 200 3.8E-55 T 12-10-2018 PA257_5854 ad32348b69bfa08a6b413f0177c9fbb2 205 Pfam PF03550 Outer membrane lipoprotein LolB 48 198 4.8E-49 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PA257_5854 ad32348b69bfa08a6b413f0177c9fbb2 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 2 200 2.3E-90 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 SMART SM00267 151 323 6.4E-52 T 12-10-2018 IPR000160 GGDEF domain PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 SUPERFAMILY SSF55073 167 322 4.71E-46 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 Pfam PF08447 PAS fold 57 145 3.3E-18 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 158 5.7E-14 T 12-10-2018 IPR000014 PAS domain PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 318 2.5E-44 T 12-10-2018 IPR000160 GGDEF domain PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 Gene3D G3DSA:3.30.450.20 41 156 2.6E-25 T 12-10-2018 PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 Gene3D G3DSA:3.30.70.270 157 322 5.7E-55 T 12-10-2018 PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 SMART SM00086 108 151 4.3E-5 T 12-10-2018 IPR001610 PAC motif PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 158 321 1.4E-43 T 12-10-2018 IPR000160 GGDEF domain PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 SMART SM00091 33 102 0.0022 T 12-10-2018 IPR000014 PAS domain PA257_0356 b101b32e5dbb47cf67e076fd626700c3 323 SUPERFAMILY SSF55785 39 153 1.21E-18 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0129 cc5bee05f25a00c94538a6354be68929 530 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 34 477 5.5E-151 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 254 308 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 Gene3D G3DSA:1.20.210.10 13 530 1.9E-217 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 SUPERFAMILY SSF81442 23 529 6.54E-193 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 26 529 8.4E-212 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 322 343 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 142 154 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 25 50 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 123 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 201 220 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 357 375 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 404 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 72 95 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 435 456 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 252 273 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 172 190 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0129 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 298 313 1.3E-121 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 Gene3D G3DSA:1.10.8.60 310 387 1.2E-22 T 12-10-2018 PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 SMART SM00382 159 303 1.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 Gene3D G3DSA:1.10.10.60 392 442 8.5E-9 T 12-10-2018 PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 Pfam PF00158 Sigma-54 interaction domain 140 305 2.2E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 SUPERFAMILY SSF52540 139 380 4.76E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 442 5.2E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 5.2E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 Pfam PF02954 Bacterial regulatory protein, Fis family 403 435 2.0E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 SUPERFAMILY SSF46689 352 441 5.63E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 Gene3D G3DSA:3.40.50.300 130 309 5.5E-63 T 12-10-2018 PA257_3798 78eb00378ff0cbbb447c091ac13ae350 442 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 141 437 5.7E-31 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 126 3.2E-33 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 SUPERFAMILY SSF46548 15 151 1.52E-27 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 Gene3D G3DSA:1.10.1060.10 10 139 5.8E-37 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 Gene3D G3DSA:3.50.50.60 140 260 6.3E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 Gene3D G3DSA:3.50.50.60 273 455 1.1E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 SUPERFAMILY SSF51971 139 381 7.65E-51 T 12-10-2018 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 296 1.2E-9 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 164 1.2E-9 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 411 429 1.2E-9 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 372 388 2.7E-19 T 12-10-2018 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 294 2.7E-19 T 12-10-2018 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 162 2.7E-19 T 12-10-2018 PA257_0578 c93602b30e34d0859f41da3c36ac31bf 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 401 423 2.7E-19 T 12-10-2018 PA257_6325 59635eb97401a43517ac01887a5b809c 355 Gene3D G3DSA:3.20.20.210 1 355 8.2E-170 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PA257_6325 59635eb97401a43517ac01887a5b809c 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PA257_6325 59635eb97401a43517ac01887a5b809c 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 8.9E-135 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PA257_6325 59635eb97401a43517ac01887a5b809c 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 6.4E-142 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PA257_6325 59635eb97401a43517ac01887a5b809c 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.027 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PA257_6325 59635eb97401a43517ac01887a5b809c 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PA257_6325 59635eb97401a43517ac01887a5b809c 355 SUPERFAMILY SSF51726 1 354 3.66E-123 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 41.259 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 SUPERFAMILY SSF55681 116 423 2.49E-102 T 12-10-2018 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.0E-30 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 Gene3D G3DSA:3.30.930.10 105 426 3.7E-120 T 12-10-2018 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 Gene3D G3DSA:1.10.287.40 1 104 1.2E-21 T 12-10-2018 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 7.7E-34 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 7.7E-34 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 7.7E-34 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 7.7E-34 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 7.7E-34 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 218 402 4.5E-36 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 2.3E-172 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PIRSF PIRSF001529 1 426 3.6E-180 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PA257_2944 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 SUPERFAMILY SSF46589 1 112 6.28E-31 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 PA257_1728 b523e6dd0f8117ce02bfbf4274233e6c 662 Gene3D G3DSA:3.40.50.720 316 659 2.5E-118 T 12-10-2018 PA257_1728 b523e6dd0f8117ce02bfbf4274233e6c 662 SUPERFAMILY SSF50486 207 300 6.75E-21 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 PA257_1728 b523e6dd0f8117ce02bfbf4274233e6c 662 SUPERFAMILY SSF51735 319 652 3.41E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1728 b523e6dd0f8117ce02bfbf4274233e6c 662 PIRSF PIRSF036506 3 661 0.0 T 12-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 PA257_1728 b523e6dd0f8117ce02bfbf4274233e6c 662 Gene3D G3DSA:3.40.50.12230 3 307 5.7E-101 T 12-10-2018 PA257_1728 b523e6dd0f8117ce02bfbf4274233e6c 662 Pfam PF01370 NAD dependent epimerase/dehydratase family 320 567 6.9E-44 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_1728 b523e6dd0f8117ce02bfbf4274233e6c 662 Pfam PF00551 Formyl transferase 28 175 5.4E-26 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_1728 b523e6dd0f8117ce02bfbf4274233e6c 662 SUPERFAMILY SSF53328 5 204 1.83E-54 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_1728 b523e6dd0f8117ce02bfbf4274233e6c 662 Pfam PF02911 Formyl transferase, C-terminal domain 204 279 1.3E-15 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_1728 b523e6dd0f8117ce02bfbf4274233e6c 662 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 3 661 61.338 T 12-10-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00520+2.1.2.13+1.1.1.305 PA257_3178 f0523aa9ad95574ac51469624d8027e9 83 Pfam PF00717 Peptidase S24-like 1 62 2.6E-8 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_3178 f0523aa9ad95574ac51469624d8027e9 83 SUPERFAMILY SSF51306 1 80 2.35E-17 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_3178 f0523aa9ad95574ac51469624d8027e9 83 Gene3D G3DSA:2.10.109.10 1 82 4.8E-10 T 12-10-2018 PA257_0533 f0523aa9ad95574ac51469624d8027e9 83 Pfam PF00717 Peptidase S24-like 1 62 2.6E-8 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_0533 f0523aa9ad95574ac51469624d8027e9 83 SUPERFAMILY SSF51306 1 80 2.35E-17 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_0533 f0523aa9ad95574ac51469624d8027e9 83 Gene3D G3DSA:2.10.109.10 1 82 4.8E-10 T 12-10-2018 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 Gene3D G3DSA:3.40.190.10 27 331 9.2E-133 T 12-10-2018 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 Gene3D G3DSA:3.40.190.10 130 356 9.2E-133 T 12-10-2018 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 175 194 4.5E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 152 166 4.5E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 4.5E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 212 231 4.5E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 121 137 4.5E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 262 281 4.5E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 4.5E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 4.5E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 307 333 4.5E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 4.5E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 SUPERFAMILY SSF53850 24 362 1.65E-99 T 12-10-2018 PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 Pfam PF13416 Bacterial extracellular solute-binding protein 40 328 5.3E-31 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_4384 c4f76064df61fbe6d1026b2ec33a071e 363 PIRSF PIRSF019574 2 363 3.4E-132 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1066 c33c305772a5dbc485a6af4996c87499 1018 Gene3D G3DSA:2.160.20.110 844 1006 1.4E-5 T 12-10-2018 PA257_1066 c33c305772a5dbc485a6af4996c87499 1018 Gene3D G3DSA:2.160.20.110 507 689 5.3E-14 T 12-10-2018 PA257_1066 c33c305772a5dbc485a6af4996c87499 1018 Gene3D G3DSA:2.160.20.10 54 408 1.4E-74 T 12-10-2018 IPR012334 Pectin lyase fold PA257_1066 c33c305772a5dbc485a6af4996c87499 1018 Pfam PF07581 The GLUG motif 718 741 5.5E-5 T 12-10-2018 IPR011493 GLUG PA257_1066 c33c305772a5dbc485a6af4996c87499 1018 Pfam PF07581 The GLUG motif 647 677 0.0025 T 12-10-2018 IPR011493 GLUG PA257_1066 c33c305772a5dbc485a6af4996c87499 1018 SUPERFAMILY SSF51126 45 343 2.04E-43 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor PA257_1066 c33c305772a5dbc485a6af4996c87499 1018 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 88 162 1.3E-27 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_1066 c33c305772a5dbc485a6af4996c87499 1018 SMART SM00912 51 166 4.2E-45 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_1066 c33c305772a5dbc485a6af4996c87499 1018 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 22 1.2E-8 T 12-10-2018 IPR024973 ESPR domain PA257_1066 c33c305772a5dbc485a6af4996c87499 1018 Pfam PF05860 haemagglutination activity domain 53 165 5.3E-27 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_3242 7e4683ae06573c6c46bc5cba5d81b23b 550 Pfam PF00005 ABC transporter 359 493 4.5E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3242 7e4683ae06573c6c46bc5cba5d81b23b 550 Pfam PF00664 ABC transporter transmembrane region 34 174 3.6E-9 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PA257_3242 7e4683ae06573c6c46bc5cba5d81b23b 550 Gene3D G3DSA:1.20.1560.10 1 315 2.3E-27 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_3242 7e4683ae06573c6c46bc5cba5d81b23b 550 SMART SM00382 366 550 1.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3242 7e4683ae06573c6c46bc5cba5d81b23b 550 SUPERFAMILY SSF90123 10 312 7.06E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_3242 7e4683ae06573c6c46bc5cba5d81b23b 550 Gene3D G3DSA:3.40.50.300 325 550 1.3E-40 T 12-10-2018 PA257_3242 7e4683ae06573c6c46bc5cba5d81b23b 550 SUPERFAMILY SSF52540 336 547 6.2E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3242 7e4683ae06573c6c46bc5cba5d81b23b 550 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 6 548 7.7E-222 T 12-10-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015833|GO:0016021|GO:1904680 PA257_1718 97b263dea873b405264dea7cf6df9074 259 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PA257_1718 97b263dea873b405264dea7cf6df9074 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PA257_1718 97b263dea873b405264dea7cf6df9074 259 Gene3D G3DSA:3.20.20.140 1 258 3.4E-81 T 12-10-2018 PA257_1718 97b263dea873b405264dea7cf6df9074 259 PIRSF PIRSF005902 1 259 2.9E-70 T 12-10-2018 IPR001130 TatD family GO:0016788 PA257_1718 97b263dea873b405264dea7cf6df9074 259 SUPERFAMILY SSF51556 3 258 1.17E-79 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_1718 97b263dea873b405264dea7cf6df9074 259 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 257 9.6E-62 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 PA257_1718 97b263dea873b405264dea7cf6df9074 259 Pfam PF01026 TatD related DNase 4 256 8.6E-67 T 12-10-2018 IPR001130 TatD family GO:0016788 PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 Gene3D G3DSA:3.50.50.90 321 555 6.5E-50 T 12-10-2018 PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 Gene3D G3DSA:3.50.50.90 1 277 1.1E-77 T 12-10-2018 PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 541 8.6E-14 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 Pfam PF00890 FAD binding domain 9 378 6.7E-37 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 SUPERFAMILY SSF46977 425 552 3.4E-38 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 PIRSF PIRSF000171 1 561 2.6E-234 T 12-10-2018 PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.7E-10 T 12-10-2018 PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.7E-10 T 12-10-2018 PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 SUPERFAMILY SSF51905 4 407 4.24E-62 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 2.8E-6 T 12-10-2018 PA257_3346 ac78f76970b8e78cab659acea9cdf693 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.8E-6 T 12-10-2018 PA257_5633 7cdc40201a7a817623cd35ec1480621e 575 SUPERFAMILY SSF110849 36 137 2.79E-11 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PA257_5633 7cdc40201a7a817623cd35ec1480621e 575 SMART SM00470 36 134 0.0087 T 12-10-2018 IPR003115 ParB/Sulfiredoxin PA257_5633 7cdc40201a7a817623cd35ec1480621e 575 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 27 288 5.5E-121 T 12-10-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB PA257_5633 7cdc40201a7a817623cd35ec1480621e 575 Pfam PF02195 ParB-like nuclease domain 39 125 1.6E-6 T 12-10-2018 IPR003115 ParB/Sulfiredoxin PA257_2344 c7f2cad3acf7049e0e4c335f619b8e22 210 Pfam PF02223 Thymidylate kinase 8 195 4.3E-48 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 PA257_2344 c7f2cad3acf7049e0e4c335f619b8e22 210 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 30.163 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PA257_2344 c7f2cad3acf7049e0e4c335f619b8e22 210 SUPERFAMILY SSF52540 3 207 1.93E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2344 c7f2cad3acf7049e0e4c335f619b8e22 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 195 1.8E-52 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PA257_2344 c7f2cad3acf7049e0e4c335f619b8e22 210 Gene3D G3DSA:3.40.50.300 1 210 8.0E-70 T 12-10-2018 PA257_2567 81bff099fb5d732fc30513a075327407 170 Pfam PF10517 Electron transfer DM13 64 155 2.0E-20 T 12-10-2018 IPR019545 DM13 domain PA257_0281 d503ebc19d4dba7377533855bbf61e29 154 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 104 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PA257_0281 d503ebc19d4dba7377533855bbf61e29 154 SMART SM00347 30 133 9.4E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_0281 d503ebc19d4dba7377533855bbf61e29 154 Pfam PF01047 MarR family 40 96 7.0E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_0281 d503ebc19d4dba7377533855bbf61e29 154 SUPERFAMILY SSF46785 7 148 1.55E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0281 d503ebc19d4dba7377533855bbf61e29 154 Gene3D G3DSA:1.10.10.10 3 148 1.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4787 b1c96d35d0700a1b277736b2bde5935c 136 Pfam PF03168 Late embryogenesis abundant protein 31 125 5.2E-22 T 12-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup PA257_4787 b1c96d35d0700a1b277736b2bde5935c 136 Gene3D G3DSA:2.60.40.1820 2 128 4.3E-15 T 12-10-2018 PA257_4787 b1c96d35d0700a1b277736b2bde5935c 136 SMART SM00769 10 129 8.1E-37 T 12-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 PA257_4787 b1c96d35d0700a1b277736b2bde5935c 136 SUPERFAMILY SSF117070 3 128 1.83E-30 T 12-10-2018 PA257_4787 b1c96d35d0700a1b277736b2bde5935c 136 ProDom PD010978 LATE EMBRYOGENESIS ABUNDANT DESICCATION SIMILAR PROTECTANT PROTEINS RELATED EMBRYOGENESIS-ABUNDANT EMBRYOGENESIS-LIKE 4 128 7.0E-4 T 12-10-2018 PA257_0747 6494e765d38196e4b0efa62ab8754b96 252 Pfam PF00226 DnaJ domain 190 245 2.9E-8 T 12-10-2018 IPR001623 DnaJ domain PA257_0747 6494e765d38196e4b0efa62ab8754b96 252 SUPERFAMILY SSF46565 130 244 3.79E-18 T 12-10-2018 IPR036869 Chaperone J-domain superfamily PA257_0747 6494e765d38196e4b0efa62ab8754b96 252 PRINTS PR00625 DnaJ domain signature 230 250 2.7E-6 T 12-10-2018 IPR001623 DnaJ domain PA257_0747 6494e765d38196e4b0efa62ab8754b96 252 PRINTS PR00625 DnaJ domain signature 206 221 2.7E-6 T 12-10-2018 IPR001623 DnaJ domain PA257_0747 6494e765d38196e4b0efa62ab8754b96 252 PRINTS PR00625 DnaJ domain signature 188 206 2.7E-6 T 12-10-2018 IPR001623 DnaJ domain PA257_0747 6494e765d38196e4b0efa62ab8754b96 252 SUPERFAMILY SSF158682 21 175 2.22E-11 T 12-10-2018 IPR029024 TerB-like PA257_0747 6494e765d38196e4b0efa62ab8754b96 252 Gene3D G3DSA:1.10.3680.10 51 176 1.1E-6 T 12-10-2018 IPR029024 TerB-like PA257_0747 6494e765d38196e4b0efa62ab8754b96 252 SMART SM00271 185 250 2.3E-10 T 12-10-2018 IPR001623 DnaJ domain PA257_0747 6494e765d38196e4b0efa62ab8754b96 252 Gene3D G3DSA:1.10.287.110 177 250 1.2E-9 T 12-10-2018 IPR036869 Chaperone J-domain superfamily PA257_1890 f19721d49195c8e0dcffe150d9f7a26d 334 Gene3D G3DSA:3.40.190.10 31 259 9.2E-97 T 12-10-2018 PA257_1890 f19721d49195c8e0dcffe150d9f7a26d 334 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 277 2.3E-70 T 12-10-2018 PA257_1890 f19721d49195c8e0dcffe150d9f7a26d 334 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 2 289 1.5E-99 T 12-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 PA257_1890 f19721d49195c8e0dcffe150d9f7a26d 334 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 7 252 6.7E-82 T 12-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 PA257_1890 f19721d49195c8e0dcffe150d9f7a26d 334 Gene3D G3DSA:1.20.58.90 275 334 8.4E-33 T 12-10-2018 PA257_1890 f19721d49195c8e0dcffe150d9f7a26d 334 SUPERFAMILY SSF53850 49 243 3.93E-36 T 12-10-2018 PA257_1890 f19721d49195c8e0dcffe150d9f7a26d 334 Gene3D G3DSA:3.40.190.10 115 227 9.2E-97 T 12-10-2018 PA257_3192 d9dac896573449b5740342edd24ad7b4 346 Gene3D G3DSA:3.30.479.30 116 244 2.0E-6 T 12-10-2018 PA257_3192 d9dac896573449b5740342edd24ad7b4 346 SMART SM00244 38 242 5.3E-4 T 12-10-2018 IPR001107 Band 7 domain PA257_3192 d9dac896573449b5740342edd24ad7b4 346 Pfam PF01145 SPFH domain / Band 7 family 42 259 8.2E-21 T 12-10-2018 IPR001107 Band 7 domain PA257_3288 f9ac66e40d01e6fced391587831a9192 381 Pfam PF00296 Luciferase-like monooxygenase 1 324 6.8E-94 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_3288 f9ac66e40d01e6fced391587831a9192 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 347 1.1E-193 T 12-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 PA257_3288 f9ac66e40d01e6fced391587831a9192 381 SUPERFAMILY SSF51679 1 349 4.58E-103 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_3288 f9ac66e40d01e6fced391587831a9192 381 Gene3D G3DSA:3.20.20.30 1 354 3.0E-152 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_3288 f9ac66e40d01e6fced391587831a9192 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 379 79.925 T 12-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 PA257_0331 d6f44c334d38537c01c065c3ec4b5eda 399 SMART SM00448 8 123 2.7E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0331 d6f44c334d38537c01c065c3ec4b5eda 399 Gene3D G3DSA:3.40.50.2300 1 133 2.5E-21 T 12-10-2018 PA257_0331 d6f44c334d38537c01c065c3ec4b5eda 399 Pfam PF08668 HDOD domain 162 348 9.4E-40 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD PA257_0331 d6f44c334d38537c01c065c3ec4b5eda 399 SUPERFAMILY SSF52172 10 127 1.25E-22 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0331 d6f44c334d38537c01c065c3ec4b5eda 399 Gene3D G3DSA:1.10.3210.10 142 395 1.9E-32 T 12-10-2018 PA257_0331 d6f44c334d38537c01c065c3ec4b5eda 399 Pfam PF00072 Response regulator receiver domain 10 123 9.7E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0331 d6f44c334d38537c01c065c3ec4b5eda 399 SUPERFAMILY SSF109604 150 397 1.35E-37 T 12-10-2018 PA257_5146 83e31d4118eb4d4360df8fb5e4d0b54e 194 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 7 75 3.0E-16 T 12-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 PA257_5146 83e31d4118eb4d4360df8fb5e4d0b54e 194 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 122 175 1.3E-11 T 12-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal PA257_5146 83e31d4118eb4d4360df8fb5e4d0b54e 194 Gene3D G3DSA:1.10.10.880 6 72 1.0E-16 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 PA257_5146 83e31d4118eb4d4360df8fb5e4d0b54e 194 SUPERFAMILY SSF89069 6 72 7.32E-14 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 5.0E-5 T 12-10-2018 PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 5.5E-62 T 12-10-2018 PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 SUPERFAMILY SSF51735 5 245 1.9E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 6.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 Gene3D G3DSA:3.40.50.720 1 247 1.4E-80 T 12-10-2018 PA257_1058 b562348d9f0f6b93147daa9c65ce3bc5 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 2.5E-13 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 2.5E-13 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 2.5E-13 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 6.9E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 6.9E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 6.9E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 4.6E-131 T 12-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 SUPERFAMILY SSF53474 4 296 8.24E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PIRSF PIRSF006431 1 315 1.5E-135 T 12-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 Gene3D G3DSA:3.40.50.1820 2 312 2.5E-105 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6372 088d45bf8ccbbdb2fac286bfbc8f9cae 323 Pfam PF00561 alpha/beta hydrolase fold 36 296 2.1E-37 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_5208 a6e914a15935fdf63d3612f4cd781c8a 759 SUPERFAMILY SSF52540 351 736 4.33E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5208 a6e914a15935fdf63d3612f4cd781c8a 759 Pfam PF00271 Helicase conserved C-terminal domain 584 695 1.7E-5 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_5208 a6e914a15935fdf63d3612f4cd781c8a 759 SMART SM00487 69 413 5.5E-9 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_5208 a6e914a15935fdf63d3612f4cd781c8a 759 Gene3D G3DSA:3.40.50.300 495 749 1.8E-24 T 12-10-2018 PA257_5208 a6e914a15935fdf63d3612f4cd781c8a 759 Gene3D G3DSA:3.40.50.300 61 181 7.0E-8 T 12-10-2018 PA257_5208 a6e914a15935fdf63d3612f4cd781c8a 759 Gene3D G3DSA:3.40.50.10810 312 454 1.9E-6 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PA257_5208 a6e914a15935fdf63d3612f4cd781c8a 759 SUPERFAMILY SSF52540 69 411 1.8E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Pfam PF03952 Enolase, N-terminal domain 4 134 3.1E-58 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 367 384 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 338 352 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 315 326 1.2E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SMART SM01193 4 134 2.0E-92 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SUPERFAMILY SSF51604 143 427 3.14E-129 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SMART SM01192 143 429 1.2E-221 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 1.7E-205 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Gene3D G3DSA:3.30.390.10 1 127 2.9E-54 T 12-10-2018 IPR029017 Enolase-like, N-terminal PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SUPERFAMILY SSF54826 3 138 1.69E-56 T 12-10-2018 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 426 1.9E-137 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Hamap MF_00318 Enolase [eno]. 2 415 44.578 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PIRSF PIRSF001400 1 429 1.5E-192 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_1586 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Gene3D G3DSA:3.20.20.120 128 429 4.2E-136 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PA257_2832 87b5db5063e260f18e64edbdcc31346c 112 SUPERFAMILY SSF54862 3 101 3.35E-22 T 12-10-2018 PA257_2832 87b5db5063e260f18e64edbdcc31346c 112 Gene3D G3DSA:3.30.70.20 2 102 5.8E-31 T 12-10-2018 PA257_2832 87b5db5063e260f18e64edbdcc31346c 112 Pfam PF11953 Domain of unknown function (DUF3470) 66 109 1.5E-14 T 12-10-2018 IPR022569 Ferredoxin, C-terminal PA257_2832 87b5db5063e260f18e64edbdcc31346c 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_2832 87b5db5063e260f18e64edbdcc31346c 112 Pfam PF00037 4Fe-4S binding domain 34 56 3.1E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_2832 87b5db5063e260f18e64edbdcc31346c 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.9E-18 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PA257_2832 87b5db5063e260f18e64edbdcc31346c 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.9E-18 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PA257_2832 87b5db5063e260f18e64edbdcc31346c 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.9E-18 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PA257_3066 7bb2b8b485c659e081eefc4efdbff1d1 310 Pfam PF00775 Dioxygenase 105 291 2.2E-67 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PA257_3066 7bb2b8b485c659e081eefc4efdbff1d1 310 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 8 290 4.1E-141 T 12-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 PA257_3066 7bb2b8b485c659e081eefc4efdbff1d1 310 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 135 163 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PA257_3066 7bb2b8b485c659e081eefc4efdbff1d1 310 Gene3D G3DSA:2.60.130.10 1 310 2.4E-121 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PA257_3066 7bb2b8b485c659e081eefc4efdbff1d1 310 Pfam PF04444 Catechol dioxygenase N terminus 27 95 2.2E-24 T 12-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 PA257_3066 7bb2b8b485c659e081eefc4efdbff1d1 310 SUPERFAMILY SSF49482 4 293 6.8E-96 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PA257_4365 59cda996bfd432519cc04571f0343518 902 SUPERFAMILY SSF56784 330 740 4.55E-62 T 12-10-2018 IPR036412 HAD-like superfamily PA257_4365 59cda996bfd432519cc04571f0343518 902 SUPERFAMILY SSF81653 122 229 2.48E-30 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 Gene3D G3DSA:2.70.150.10 26 234 1.8E-282 T 12-10-2018 PA257_4365 59cda996bfd432519cc04571f0343518 902 Gene3D G3DSA:3.40.1110.10 342 542 1.8E-282 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 SUPERFAMILY SSF81660 339 539 3.27E-53 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 SMART SM00831 11 84 1.3E-32 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 Pfam PF00122 E1-E2 ATPase 121 312 3.6E-52 T 12-10-2018 PA257_4365 59cda996bfd432519cc04571f0343518 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 607 728 1.1E-35 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 90 353 6.7E-41 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 Pfam PF00689 Cation transporting ATPase, C-terminus 721 893 1.6E-44 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 668 693 6.0E-20 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 636 652 6.0E-20 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 608 624 6.0E-20 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 493 511 6.0E-20 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 Gene3D G3DSA:3.40.50.1000 329 681 1.8E-282 T 12-10-2018 IPR023214 HAD superfamily PA257_4365 59cda996bfd432519cc04571f0343518 902 Gene3D G3DSA:1.20.1110.10 62 892 1.8E-282 T 12-10-2018 PA257_4365 59cda996bfd432519cc04571f0343518 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 329 650 2.9E-21 T 12-10-2018 PA257_4365 59cda996bfd432519cc04571f0343518 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 332 346 1.5E-41 T 12-10-2018 PA257_4365 59cda996bfd432519cc04571f0343518 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 169 183 1.5E-41 T 12-10-2018 PA257_4365 59cda996bfd432519cc04571f0343518 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 546 1.5E-41 T 12-10-2018 PA257_4365 59cda996bfd432519cc04571f0343518 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 672 1.5E-41 T 12-10-2018 PA257_4365 59cda996bfd432519cc04571f0343518 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 655 1.5E-41 T 12-10-2018 PA257_4365 59cda996bfd432519cc04571f0343518 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 567 1.5E-41 T 12-10-2018 PA257_4365 59cda996bfd432519cc04571f0343518 902 SUPERFAMILY SSF81665 11 898 3.92E-121 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PA257_4365 59cda996bfd432519cc04571f0343518 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 13 78 6.8E-16 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 PA257_3746 6adad21186cbfe4d1304354557cdc341 402 Pfam PF07690 Major Facilitator Superfamily 230 399 1.9E-10 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3746 6adad21186cbfe4d1304354557cdc341 402 Gene3D G3DSA:1.20.1250.20 16 398 4.5E-36 T 12-10-2018 PA257_3746 6adad21186cbfe4d1304354557cdc341 402 SUPERFAMILY SSF103473 22 400 2.75E-44 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3746 6adad21186cbfe4d1304354557cdc341 402 Hamap MF_01118 Uncharacterized MFS-type transporter YhhS [yhhS]. 13 400 45.187 T 12-10-2018 IPR023008 Uncharacterized MFS-type transporter YhhS-like PA257_4308 ec8cdbc833e756d36699ab3e1d6bdf7c 455 Pfam PF13520 Amino acid permease 15 423 5.0E-36 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_4308 ec8cdbc833e756d36699ab3e1d6bdf7c 455 PIRSF PIRSF006060 1 453 1.4E-55 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_4308 ec8cdbc833e756d36699ab3e1d6bdf7c 455 Gene3D G3DSA:1.20.1740.10 10 452 4.3E-54 T 12-10-2018 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Pfam PF09334 tRNA synthetases class I (M) 39 171 5.6E-19 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 631 665 3.9E-7 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 428 584 7.0E-8 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 536 558 6.8E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.8E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.8E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.8E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 497 515 6.8E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.8E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 569 579 6.8E-51 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 872 23.393 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Pfam PF08264 Anticodon-binding domain of tRNA 715 834 1.4E-14 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Gene3D G3DSA:3.10.20.590 811 873 4.5E-22 T 12-10-2018 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 SUPERFAMILY SSF52374 5 681 8.96E-151 T 12-10-2018 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 413 8.8E-68 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Gene3D G3DSA:1.10.730.10 9 804 0.0 T 12-10-2018 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 SUPERFAMILY SSF50677 226 424 1.15E-49 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 872 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Gene3D G3DSA:3.40.50.620 33 578 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Gene3D G3DSA:3.90.740.10 227 424 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 Gene3D G3DSA:3.10.330.110 579 641 0.0 T 12-10-2018 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1165 ca04e09ebd81e54c4651e2874c14cd14 873 SUPERFAMILY SSF47323 675 872 7.85E-34 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_4739 5ab6de3b0b0977f1d6802cc232c1c012 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.9E-31 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PA257_4739 5ab6de3b0b0977f1d6802cc232c1c012 249 Pfam PF00460 Flagella basal body rod protein 5 35 5.1E-6 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PA257_4739 5ab6de3b0b0977f1d6802cc232c1c012 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 226 2.5E-53 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 PA257_4739 5ab6de3b0b0977f1d6802cc232c1c012 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 239 4.3E-18 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PA257_4739 5ab6de3b0b0977f1d6802cc232c1c012 249 SUPERFAMILY SSF117143 78 207 7.59E-16 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 SUPERFAMILY SSF53187 4 423 2.17E-107 T 12-10-2018 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 Gene3D G3DSA:2.30.250.10 86 218 7.9E-179 T 12-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 Gene3D G3DSA:3.40.630.10 10 422 7.9E-179 T 12-10-2018 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 12 423 8.5E-138 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 SUPERFAMILY SSF101821 88 213 1.19E-32 T 12-10-2018 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 301 317 1.5E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 109 129 1.5E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 76 92 1.5E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 144 161 1.5E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 390 405 1.5E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 262 280 1.5E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PA257_2042 d50e0ac7e465601f3fe9c72710eb1f63 429 Hamap MF_00467 Probable M18 family aminopeptidase 2 [apeB]. 1 425 60.355 T 12-10-2018 IPR022984 M18 family aminopeptidase 2, putative GO:0004177 PA257_2328 e435e97cbb108a17d22c8d52808616c9 1054 Gene3D G3DSA:2.40.50.140 28 120 1.1E-32 T 12-10-2018 PA257_2328 e435e97cbb108a17d22c8d52808616c9 1054 Hamap MF_00970 Ribonuclease E [rne]. 1 1042 39.308 T 12-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 PA257_2328 e435e97cbb108a17d22c8d52808616c9 1054 SUPERFAMILY SSF50249 37 120 6.5E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2328 e435e97cbb108a17d22c8d52808616c9 1054 Gene3D G3DSA:3.40.1260.20 396 506 3.2E-36 T 12-10-2018 PA257_2328 e435e97cbb108a17d22c8d52808616c9 1054 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 419 1.8E-167 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PA257_2328 e435e97cbb108a17d22c8d52808616c9 1054 Pfam PF10150 Ribonuclease E/G family 116 385 9.9E-96 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PA257_2328 e435e97cbb108a17d22c8d52808616c9 1054 SMART SM00316 34 114 7.7E-13 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_2328 e435e97cbb108a17d22c8d52808616c9 1054 Pfam PF00575 S1 RNA binding domain 33 113 6.3E-15 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_3568 41e585346795f233936b277ae92f32cf 138 SMART SM00116 74 122 0.0016 T 12-10-2018 IPR000644 CBS domain PA257_3568 41e585346795f233936b277ae92f32cf 138 SMART SM00116 10 57 0.0019 T 12-10-2018 IPR000644 CBS domain PA257_3568 41e585346795f233936b277ae92f32cf 138 Pfam PF00571 CBS domain 3 53 1.2E-10 T 12-10-2018 IPR000644 CBS domain PA257_3568 41e585346795f233936b277ae92f32cf 138 Pfam PF00571 CBS domain 68 119 4.5E-8 T 12-10-2018 IPR000644 CBS domain PA257_3568 41e585346795f233936b277ae92f32cf 138 SUPERFAMILY SSF54631 1 117 8.09E-30 T 12-10-2018 PA257_3568 41e585346795f233936b277ae92f32cf 138 Gene3D G3DSA:3.10.580.10 1 137 4.2E-32 T 12-10-2018 PA257_5817 99a9e9620c9824da4958976160915c3f 712 Gene3D G3DSA:3.30.450.20 73 237 5.9E-38 T 12-10-2018 PA257_5817 99a9e9620c9824da4958976160915c3f 712 SMART SM00304 381 435 1.2E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5817 99a9e9620c9824da4958976160915c3f 712 Pfam PF00672 HAMP domain 383 431 3.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5817 99a9e9620c9824da4958976160915c3f 712 Gene3D G3DSA:3.30.450.20 64 339 5.9E-38 T 12-10-2018 PA257_5817 99a9e9620c9824da4958976160915c3f 712 Pfam PF02743 Cache domain 49 287 3.3E-16 T 12-10-2018 IPR033479 Double Cache domain 1 PA257_5817 99a9e9620c9824da4958976160915c3f 712 SUPERFAMILY SSF58104 403 712 3.01E-82 T 12-10-2018 PA257_5817 99a9e9620c9824da4958976160915c3f 712 SMART SM00283 450 711 1.3E-81 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5817 99a9e9620c9824da4958976160915c3f 712 Gene3D G3DSA:1.10.287.950 382 712 1.2E-80 T 12-10-2018 PA257_5817 99a9e9620c9824da4958976160915c3f 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 495 678 6.3E-45 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_6175 d8b9aff0e84dff567f4da4b51955de0a 989 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 972 989 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_6175 d8b9aff0e84dff567f4da4b51955de0a 989 SMART SM00965 97 148 1.2E-11 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_6175 d8b9aff0e84dff567f4da4b51955de0a 989 Pfam PF00593 TonB dependent receptor 455 987 1.2E-40 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_6175 d8b9aff0e84dff567f4da4b51955de0a 989 SUPERFAMILY SSF56935 161 989 6.75E-86 T 12-10-2018 PA257_6175 d8b9aff0e84dff567f4da4b51955de0a 989 Gene3D G3DSA:2.170.130.10 172 297 1.1E-35 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_6175 d8b9aff0e84dff567f4da4b51955de0a 989 Pfam PF07715 TonB-dependent Receptor Plug Domain 178 281 3.6E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_6175 d8b9aff0e84dff567f4da4b51955de0a 989 Gene3D G3DSA:3.55.50.30 75 146 9.0E-23 T 12-10-2018 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 SUPERFAMILY SSF47819 527 602 3.05E-22 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 SMART SM00487 14 210 6.8E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 SMART SM00956 404 507 6.9E-47 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 SMART SM00490 242 323 3.4E-24 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 Pfam PF16124 RecQ zinc-binding 335 396 1.4E-20 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 599 4.3E-245 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 Pfam PF00270 DEAD/DEAH box helicase 21 180 4.0E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 Gene3D G3DSA:1.10.150.80 521 602 2.1E-23 T 12-10-2018 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 Gene3D G3DSA:3.40.50.300 201 332 8.3E-38 T 12-10-2018 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 Gene3D G3DSA:3.40.50.300 1 200 1.2E-82 T 12-10-2018 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 455 3.2E-153 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 SUPERFAMILY SSF52540 3 189 1.52E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 Gene3D G3DSA:1.10.10.10 333 515 5.9E-50 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 Pfam PF09382 RQC domain 401 510 8.1E-36 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 SMART SM00341 528 608 4.2E-20 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 Pfam PF00271 Helicase conserved C-terminal domain 219 322 1.1E-15 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 Pfam PF00570 HRDC domain 533 598 1.7E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 PA257_1931 81eff3f76c3f4ae09c1f6301a4474ae7 712 SUPERFAMILY SSF52540 200 444 3.31E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2825 5ec6b7ee8a1f7282dbb04ef4bb5caf83 179 Pfam PF04542 Sigma-70 region 2 29 88 1.3E-4 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_2825 5ec6b7ee8a1f7282dbb04ef4bb5caf83 179 SUPERFAMILY SSF88659 117 174 3.27E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_2825 5ec6b7ee8a1f7282dbb04ef4bb5caf83 179 Pfam PF08281 Sigma-70, region 4 122 173 1.5E-11 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_2825 5ec6b7ee8a1f7282dbb04ef4bb5caf83 179 SUPERFAMILY SSF88946 27 87 3.49E-5 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_2825 5ec6b7ee8a1f7282dbb04ef4bb5caf83 179 Gene3D G3DSA:1.10.10.10 100 177 2.1E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3733 3ac4c83e1790ad4ca75652c85588bc7b 450 SUPERFAMILY SSF103473 10 433 4.97E-79 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3733 3ac4c83e1790ad4ca75652c85588bc7b 450 Pfam PF07690 Major Facilitator Superfamily 29 396 1.8E-50 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3733 3ac4c83e1790ad4ca75652c85588bc7b 450 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_3733 3ac4c83e1790ad4ca75652c85588bc7b 450 Gene3D G3DSA:1.20.1250.20 18 430 1.5E-68 T 12-10-2018 PA257_2365 a6d887338eb5e35822bf1fddfd24d4da 364 Pfam PF00793 DAHP synthetase I family 60 353 1.7E-78 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PA257_2365 a6d887338eb5e35822bf1fddfd24d4da 364 PIRSF PIRSF001361 14 364 3.2E-144 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PA257_2365 a6d887338eb5e35822bf1fddfd24d4da 364 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 27 360 3.3E-129 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PA257_2365 a6d887338eb5e35822bf1fddfd24d4da 364 SUPERFAMILY SSF51569 28 359 7.64E-117 T 12-10-2018 PA257_2365 a6d887338eb5e35822bf1fddfd24d4da 364 Gene3D G3DSA:3.20.20.70 24 364 8.8E-136 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0728 5688e379263e546f05ba4025ac7a185c 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 62.926 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 PA257_0728 5688e379263e546f05ba4025ac7a185c 341 SUPERFAMILY SSF53067 3 122 2.98E-32 T 12-10-2018 PA257_0728 5688e379263e546f05ba4025ac7a185c 341 Gene3D G3DSA:3.30.420.40 3 318 4.7E-127 T 12-10-2018 PA257_0728 5688e379263e546f05ba4025ac7a185c 341 Gene3D G3DSA:3.30.420.40 129 297 4.7E-127 T 12-10-2018 PA257_0728 5688e379263e546f05ba4025ac7a185c 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 2.2E-133 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 PA257_0728 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.1E-51 T 12-10-2018 IPR017861 Kae1/TsaD family PA257_0728 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.1E-51 T 12-10-2018 IPR017861 Kae1/TsaD family PA257_0728 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.1E-51 T 12-10-2018 IPR017861 Kae1/TsaD family PA257_0728 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.1E-51 T 12-10-2018 IPR017861 Kae1/TsaD family PA257_0728 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.1E-51 T 12-10-2018 IPR017861 Kae1/TsaD family PA257_0728 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.1E-51 T 12-10-2018 IPR017861 Kae1/TsaD family PA257_0728 5688e379263e546f05ba4025ac7a185c 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 2.0E-118 T 12-10-2018 IPR017861 Kae1/TsaD family PA257_0728 5688e379263e546f05ba4025ac7a185c 341 Pfam PF00814 Glycoprotease family 24 311 3.7E-101 T 12-10-2018 IPR000905 Gcp-like domain PA257_0728 5688e379263e546f05ba4025ac7a185c 341 SUPERFAMILY SSF53067 101 313 1.5E-43 T 12-10-2018 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 Gene3D G3DSA:2.40.50.100 67 130 1.5E-5 T 12-10-2018 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 Pfam PF13533 Biotin-lipoyl like 67 109 3.3E-6 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 Pfam PF13437 HlyD family secretion protein 249 356 6.0E-17 T 12-10-2018 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 Gene3D G3DSA:1.10.287.470 158 248 1.3E-14 T 12-10-2018 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 Gene3D G3DSA:2.40.30.170 286 371 1.3E-14 T 12-10-2018 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 Gene3D G3DSA:2.40.50.100 249 285 1.3E-14 T 12-10-2018 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 379 395 8.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 8.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 294 318 8.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 8.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 379 8.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 318 341 8.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_3872 cb61d1a558edf7a3241bf6ee1f5fde07 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 261 282 8.6E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_6936 cc73ae46c718308b540e404c84b3eb17 306 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 225 301 3.5E-21 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 PA257_6936 cc73ae46c718308b540e404c84b3eb17 306 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 226 302 1.2E-21 T 12-10-2018 IPR006260 TonB/TolA, C-terminal PA257_6936 cc73ae46c718308b540e404c84b3eb17 306 PRINTS PR01374 Gram-negative bacterial tonB protein signature 260 277 1.3E-30 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PA257_6936 cc73ae46c718308b540e404c84b3eb17 306 PRINTS PR01374 Gram-negative bacterial tonB protein signature 220 241 1.3E-30 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PA257_6936 cc73ae46c718308b540e404c84b3eb17 306 PRINTS PR01374 Gram-negative bacterial tonB protein signature 134 144 1.3E-30 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PA257_6936 cc73ae46c718308b540e404c84b3eb17 306 PRINTS PR01374 Gram-negative bacterial tonB protein signature 241 259 1.3E-30 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PA257_6936 cc73ae46c718308b540e404c84b3eb17 306 SUPERFAMILY SSF74653 219 300 1.09E-24 T 12-10-2018 PA257_6936 cc73ae46c718308b540e404c84b3eb17 306 Gene3D G3DSA:3.30.2420.10 219 297 8.9E-25 T 12-10-2018 PA257_5147 86dda65e985ac48ceba67694921bb7c1 193 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 3 190 6.9E-99 T 12-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_5147 86dda65e985ac48ceba67694921bb7c1 193 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_5147 86dda65e985ac48ceba67694921bb7c1 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 5.7E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_5147 86dda65e985ac48ceba67694921bb7c1 193 SUPERFAMILY SSF88659 123 187 7.85E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_5147 86dda65e985ac48ceba67694921bb7c1 193 SUPERFAMILY SSF88946 1 108 1.38E-32 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_5147 86dda65e985ac48ceba67694921bb7c1 193 Gene3D G3DSA:1.10.10.10 122 192 1.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5147 86dda65e985ac48ceba67694921bb7c1 193 Pfam PF04542 Sigma-70 region 2 25 92 1.1E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_5147 86dda65e985ac48ceba67694921bb7c1 193 Gene3D G3DSA:1.10.1740.10 1 121 5.9E-43 T 12-10-2018 PA257_5147 86dda65e985ac48ceba67694921bb7c1 193 Pfam PF08281 Sigma-70, region 4 132 181 2.9E-18 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_4917 9edb9189c932d4d4f35819bd39fb8a01 349 Gene3D G3DSA:3.30.1490.100 238 349 4.6E-23 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PA257_4917 9edb9189c932d4d4f35819bd39fb8a01 349 Gene3D G3DSA:2.30.40.20 21 73 3.0E-63 T 12-10-2018 PA257_4917 9edb9189c932d4d4f35819bd39fb8a01 349 Gene3D G3DSA:1.10.150.20 166 228 1.4E-19 T 12-10-2018 PA257_4917 9edb9189c932d4d4f35819bd39fb8a01 349 SUPERFAMILY SSF100879 242 348 1.63E-22 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PA257_4917 9edb9189c932d4d4f35819bd39fb8a01 349 SUPERFAMILY SSF56672 2 234 3.02E-93 T 12-10-2018 PA257_4917 9edb9189c932d4d4f35819bd39fb8a01 349 Pfam PF00817 impB/mucB/samB family 7 154 5.9E-52 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PA257_4917 9edb9189c932d4d4f35819bd39fb8a01 349 Hamap MF_01113 DNA polymerase IV [dinB]. 1 348 37.776 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 PA257_4917 9edb9189c932d4d4f35819bd39fb8a01 349 Pfam PF11798 IMS family HHH motif 169 197 8.7E-6 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 PA257_4917 9edb9189c932d4d4f35819bd39fb8a01 349 Gene3D G3DSA:3.30.70.270 4 164 3.0E-63 T 12-10-2018 PA257_1790 385f25e4e9c86a4016a6372814953461 426 Gene3D G3DSA:3.40.50.2000 4 228 2.8E-87 T 12-10-2018 PA257_1790 385f25e4e9c86a4016a6372814953461 426 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 135 8.8E-28 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_1790 385f25e4e9c86a4016a6372814953461 426 SUPERFAMILY SSF53756 1 415 1.22E-82 T 12-10-2018 PA257_1790 385f25e4e9c86a4016a6372814953461 426 Gene3D G3DSA:3.40.50.2000 229 389 2.8E-87 T 12-10-2018 PA257_5974 635a2daa3d6bcdee300298461a88c43e 216 Pfam PF01810 LysE type translocator 17 212 4.9E-57 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_5974 635a2daa3d6bcdee300298461a88c43e 216 PIRSF PIRSF006324 4 215 4.5E-57 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_5974 635a2daa3d6bcdee300298461a88c43e 216 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 23 210 2.0E-64 T 12-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 PA257_3977 13b8cab3e1033138fe58b79c8e5a6e99 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 233 4.2E-115 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 PA257_3977 13b8cab3e1033138fe58b79c8e5a6e99 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 129.836 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 PA257_3977 13b8cab3e1033138fe58b79c8e5a6e99 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 2.2E-9 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PA257_3977 13b8cab3e1033138fe58b79c8e5a6e99 240 SUPERFAMILY SSF56300 1 224 1.52E-29 T 12-10-2018 PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 Gene3D G3DSA:3.50.7.10 192 372 5.4E-237 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.5E-254 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.565 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF52029 184 376 2.62E-83 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 Gene3D G3DSA:3.30.260.10 136 410 5.4E-237 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF48592 7 521 4.28E-75 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 Gene3D G3DSA:1.10.560.10 8 521 5.4E-237 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 7.0E-94 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF54849 137 203 3.43E-24 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PA257_5451 87beb1e1996e1c4cd40de9f6725d007c 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 SUPERFAMILY SSF55681 10 291 1.57E-136 T 12-10-2018 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 Gene3D G3DSA:3.30.930.10 2 216 8.9E-113 T 12-10-2018 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 291 1.7E-152 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 Gene3D G3DSA:1.20.58.180 217 298 2.3E-33 T 12-10-2018 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.9E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.9E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.9E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.9E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.9E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 1.9E-69 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 293 61.704 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0019 9c5e64ae51abacc04b9793a3ffdb9532 315 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 299 1.6E-162 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_1870 7743ca3a3257e3530404f304262a3de2 161 Pfam PF06146 Phosphate-starvation-inducible E 59 127 2.2E-17 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like PA257_1870 7743ca3a3257e3530404f304262a3de2 161 PIRSF PIRSF029598 2 145 6.1E-40 T 12-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 PA257_3498 f3aa0144263752b01da2705c35388211 417 Gene3D G3DSA:3.40.640.10 57 316 5.9E-102 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_3498 f3aa0144263752b01da2705c35388211 417 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 233 269 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_3498 f3aa0144263752b01da2705c35388211 417 PIRSF PIRSF000521 123 156 3.7 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_3498 f3aa0144263752b01da2705c35388211 417 PIRSF PIRSF000521 1 130 8.4E-5 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_3498 f3aa0144263752b01da2705c35388211 417 PIRSF PIRSF000521 183 414 1.2E-17 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_3498 f3aa0144263752b01da2705c35388211 417 Gene3D G3DSA:3.90.1150.10 14 407 5.9E-102 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_3498 f3aa0144263752b01da2705c35388211 417 SUPERFAMILY SSF53383 10 411 3.63E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3498 f3aa0144263752b01da2705c35388211 417 Pfam PF00202 Aminotransferase class-III 22 407 1.6E-73 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_5092 5d3583d108bbe56c6957160d228ec3e3 144 Gene3D G3DSA:3.30.1330.40 1 142 3.2E-50 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_5092 5d3583d108bbe56c6957160d228ec3e3 144 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 10 141 3.6E-25 T 12-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PA257_5092 5d3583d108bbe56c6957160d228ec3e3 144 SUPERFAMILY SSF55298 7 142 8.17E-45 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 4.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 4.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 4.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 4.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 SMART SM00304 169 225 1.4E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 322 6.3E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 484 8.1E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 Gene3D G3DSA:3.40.50.2300 495 623 4.8E-31 T 12-10-2018 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 SUPERFAMILY SSF47226 632 737 8.9E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 35 141 1.1E-14 T 12-10-2018 IPR033414 Periplasmic sensor domain PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 SUPERFAMILY SSF55874 312 484 1.13E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 Pfam PF00072 Response regulator receiver domain 504 617 1.8E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 SMART SM00387 370 486 7.8E-42 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 Gene3D G3DSA:3.30.565.10 327 488 3.0E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 SMART SM00448 502 617 8.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 SMART SM00388 258 323 1.1E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 Gene3D G3DSA:1.20.120.160 627 738 2.0E-12 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 Gene3D G3DSA:1.20.1480.50 139 226 4.1E-8 T 12-10-2018 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 SUPERFAMILY SSF47384 243 321 4.71E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 Pfam PF01627 Hpt domain 653 711 5.3E-8 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 Gene3D G3DSA:1.10.287.130 227 321 2.4E-26 T 12-10-2018 PA257_6268 1dfc9913c46c8e234747bfa787e83393 750 SUPERFAMILY SSF52172 502 620 3.98E-31 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4881 e592c886509a5638cc18f50471e54688 135 Pfam PF03061 Thioesterase superfamily 46 120 7.3E-15 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_4881 e592c886509a5638cc18f50471e54688 135 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 132 2.6E-14 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PA257_4881 e592c886509a5638cc18f50471e54688 135 SUPERFAMILY SSF54637 2 133 9.61E-27 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_4881 e592c886509a5638cc18f50471e54688 135 Gene3D G3DSA:3.10.129.10 2 135 1.4E-46 T 12-10-2018 PA257_3097 5a922cd91d5fb26e16e8ede0fecd9080 278 ProSitePatterns PS00194 Thioredoxin family active site. 160 178 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PA257_3097 5a922cd91d5fb26e16e8ede0fecd9080 278 SUPERFAMILY SSF52833 106 264 1.06E-32 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_3097 5a922cd91d5fb26e16e8ede0fecd9080 278 Gene3D G3DSA:3.40.30.10 132 265 3.2E-32 T 12-10-2018 PA257_3097 5a922cd91d5fb26e16e8ede0fecd9080 278 Pfam PF00578 AhpC/TSA family 133 244 6.3E-15 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_0982 d39ed2933c4cca5fcdccb0141b741436 382 Gene3D G3DSA:3.30.60.240 121 145 1.1E-5 T 12-10-2018 PA257_6054 d39ed2933c4cca5fcdccb0141b741436 382 Gene3D G3DSA:3.30.60.240 121 145 1.1E-5 T 12-10-2018 PA257_1964 f4387d0b28695075b022523a0808559c 296 SUPERFAMILY SSF51735 8 168 4.09E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1964 f4387d0b28695075b022523a0808559c 296 Gene3D G3DSA:1.10.1040.10 168 295 3.3E-29 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_1964 f4387d0b28695075b022523a0808559c 296 PIRSF PIRSF000103 4 296 2.8E-68 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_1964 f4387d0b28695075b022523a0808559c 296 Gene3D G3DSA:3.40.50.720 5 167 4.6E-51 T 12-10-2018 PA257_1964 f4387d0b28695075b022523a0808559c 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 5.1E-26 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PA257_1964 f4387d0b28695075b022523a0808559c 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 167 1.8E-46 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PA257_1964 f4387d0b28695075b022523a0808559c 296 SUPERFAMILY SSF48179 168 292 6.35E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 SMART SM00382 140 325 1.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 SUPERFAMILY SSF50615 2 72 1.39E-23 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 Gene3D G3DSA:2.40.10.170 1 73 1.1E-28 T 12-10-2018 PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 1.3E-63 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 56.229 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 Gene3D G3DSA:3.40.50.300 74 342 3.6E-112 T 12-10-2018 PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 458 2.4E-254 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 SUPERFAMILY SSF47917 343 457 1.28E-53 T 12-10-2018 PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 SUPERFAMILY SSF52540 75 346 6.71E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 Gene3D G3DSA:1.10.1140.10 343 458 3.1E-59 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6959 1dfc8527acf239598835e56fdf7ee8b4 458 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 3.2E-20 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_1001 fafac7d2e5832253ca1aad5a75dffd13 412 Pfam PF04233 Phage Mu protein F like protein 53 169 3.1E-17 T 12-10-2018 IPR006528 Phage head morphogenesis domain PA257_2880 6e322ecb01d62db42d7630eace75332d 196 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 3.3E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5815 6e66bac66aa256a23a9779c2ae6321f6 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 225 7.5E-15 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_5815 6e66bac66aa256a23a9779c2ae6321f6 329 Gene3D G3DSA:3.40.50.720 1 329 4.3E-117 T 12-10-2018 PA257_5815 6e66bac66aa256a23a9779c2ae6321f6 329 SUPERFAMILY SSF51735 3 326 2.86E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6194 a5286f6571faa23da57901fb03f92f66 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 184 2.1E-9 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain PA257_6194 a5286f6571faa23da57901fb03f92f66 541 Pfam PF00672 HAMP domain 212 258 1.8E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_6194 a5286f6571faa23da57901fb03f92f66 541 SMART SM00283 279 540 5.3E-70 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_6194 a5286f6571faa23da57901fb03f92f66 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 505 5.8E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_6194 a5286f6571faa23da57901fb03f92f66 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 187 207 2.5E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_6194 a5286f6571faa23da57901fb03f92f66 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 2.5E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_6194 a5286f6571faa23da57901fb03f92f66 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 2.5E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_6194 a5286f6571faa23da57901fb03f92f66 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 2.5E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_6194 a5286f6571faa23da57901fb03f92f66 541 Gene3D G3DSA:1.10.287.950 211 541 1.2E-67 T 12-10-2018 PA257_6194 a5286f6571faa23da57901fb03f92f66 541 SUPERFAMILY SSF58104 232 541 9.55E-71 T 12-10-2018 PA257_6194 a5286f6571faa23da57901fb03f92f66 541 SMART SM00304 211 264 4.0E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_3033 07cbd2c2336f34459f28b5efee841085 311 Pfam PF01148 Cytidylyltransferase family 43 307 1.0E-69 T 12-10-2018 PA257_4098 a60b7d1ae3f69c9e5beb2e016f57a3f7 198 SUPERFAMILY SSF52499 2 191 9.68E-44 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_4098 a60b7d1ae3f69c9e5beb2e016f57a3f7 198 Gene3D G3DSA:3.40.50.850 3 195 2.7E-48 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_4098 a60b7d1ae3f69c9e5beb2e016f57a3f7 198 Pfam PF00857 Isochorismatase family 23 193 4.4E-35 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_1053 2dc50d8bb9ef5819cc4795aab33523dd 319 Pfam PF14525 AraC-binding-like domain 26 199 5.2E-14 T 12-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like PA257_1053 2dc50d8bb9ef5819cc4795aab33523dd 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 317 9.5E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_1053 2dc50d8bb9ef5819cc4795aab33523dd 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 301 9.5E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_1053 2dc50d8bb9ef5819cc4795aab33523dd 319 SMART SM00342 232 317 1.8E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1053 2dc50d8bb9ef5819cc4795aab33523dd 319 SUPERFAMILY SSF46689 267 318 7.94E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1053 2dc50d8bb9ef5819cc4795aab33523dd 319 Pfam PF12833 Helix-turn-helix domain 238 319 3.0E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1053 2dc50d8bb9ef5819cc4795aab33523dd 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 268 313 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_1053 2dc50d8bb9ef5819cc4795aab33523dd 319 Gene3D G3DSA:1.10.10.60 211 319 7.5E-34 T 12-10-2018 PA257_1053 2dc50d8bb9ef5819cc4795aab33523dd 319 SUPERFAMILY SSF46689 216 265 2.42E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2243 4fd33d2eb5f67fdacfed66e48c0fd5dd 158 SUPERFAMILY SSF47413 9 61 4.02E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_2243 4fd33d2eb5f67fdacfed66e48c0fd5dd 158 SMART SM00530 13 68 0.0036 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_2243 4fd33d2eb5f67fdacfed66e48c0fd5dd 158 Gene3D G3DSA:1.10.260.40 8 87 7.9E-9 T 12-10-2018 PA257_2243 4fd33d2eb5f67fdacfed66e48c0fd5dd 158 Pfam PF13560 Helix-turn-helix domain 11 58 9.4E-8 T 12-10-2018 PA257_1900 289bbc8176721318d33b49aa974c391d 177 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 1 170 1.6E-63 T 12-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_1900 289bbc8176721318d33b49aa974c391d 177 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 171 34.064 T 12-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_1900 289bbc8176721318d33b49aa974c391d 177 SMART SM00072 1 174 1.4E-4 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PA257_1900 289bbc8176721318d33b49aa974c391d 177 Gene3D G3DSA:3.30.63.10 28 83 1.9E-15 T 12-10-2018 PA257_1900 289bbc8176721318d33b49aa974c391d 177 Gene3D G3DSA:3.40.50.300 1 143 1.9E-15 T 12-10-2018 PA257_1900 289bbc8176721318d33b49aa974c391d 177 SUPERFAMILY SSF52540 1 172 9.61E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3625 21f904daffa8805347eb090214bf8d42 409 Gene3D G3DSA:2.40.160.10 30 409 7.1E-170 T 12-10-2018 IPR023614 Porin domain superfamily PA257_3625 21f904daffa8805347eb090214bf8d42 409 Pfam PF03573 outer membrane porin, OprD family 26 407 1.5E-145 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_0210 d3ded611188b08a52f984992ac0f12c9 536 ProSitePatterns PS00149 Sulfatases signature 2. 105 115 - T 12-10-2018 IPR024607 Sulfatase, conserved site PA257_0210 d3ded611188b08a52f984992ac0f12c9 536 SUPERFAMILY SSF53649 3 526 2.91E-152 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_0210 d3ded611188b08a52f984992ac0f12c9 536 Pfam PF00884 Sulfatase 5 420 1.7E-91 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PA257_0210 d3ded611188b08a52f984992ac0f12c9 536 Gene3D G3DSA:3.30.1120.10 451 536 7.0E-28 T 12-10-2018 PA257_0210 d3ded611188b08a52f984992ac0f12c9 536 Gene3D G3DSA:3.40.720.10 1 450 1.2E-158 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_0210 d3ded611188b08a52f984992ac0f12c9 536 ProSitePatterns PS00523 Sulfatases signature 1. 49 61 - T 12-10-2018 IPR024607 Sulfatase, conserved site PA257_4580 ba07ac90a3033d03c78b9cd3d91f1a78 337 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 1 331 1.4E-107 T 12-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PA257_4580 ba07ac90a3033d03c78b9cd3d91f1a78 337 SUPERFAMILY SSF55909 1 332 3.39E-112 T 12-10-2018 PA257_4580 ba07ac90a3033d03c78b9cd3d91f1a78 337 Gene3D G3DSA:3.75.10.10 1 335 1.0E-114 T 12-10-2018 PA257_3891 4754661b0b5e8f7c84d007ec4dd6dc4a 361 Pfam PF03459 TOBE domain 297 359 7.8E-18 T 12-10-2018 IPR005116 Transport-associated OB, type 1 PA257_3891 4754661b0b5e8f7c84d007ec4dd6dc4a 361 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 359 3.0E-142 T 12-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 PA257_3891 4754661b0b5e8f7c84d007ec4dd6dc4a 361 SUPERFAMILY SSF52540 10 225 1.45E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3891 4754661b0b5e8f7c84d007ec4dd6dc4a 361 Pfam PF00005 ABC transporter 19 162 7.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3891 4754661b0b5e8f7c84d007ec4dd6dc4a 361 SUPERFAMILY SSF50331 239 360 4.54E-21 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_3891 4754661b0b5e8f7c84d007ec4dd6dc4a 361 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3891 4754661b0b5e8f7c84d007ec4dd6dc4a 361 Gene3D G3DSA:3.40.50.300 9 230 8.0E-62 T 12-10-2018 PA257_3891 4754661b0b5e8f7c84d007ec4dd6dc4a 361 Gene3D G3DSA:2.40.50.100 296 360 8.5E-15 T 12-10-2018 PA257_3891 4754661b0b5e8f7c84d007ec4dd6dc4a 361 SMART SM00382 25 212 2.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3945 1e7654f2fba477385067e6905122e522 253 Gene3D G3DSA:3.40.50.150 23 192 1.7E-11 T 12-10-2018 PA257_3945 1e7654f2fba477385067e6905122e522 253 SUPERFAMILY SSF53335 90 178 1.44E-14 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3945 1e7654f2fba477385067e6905122e522 253 Pfam PF08241 Methyltransferase domain 82 131 1.8E-6 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PA257_2255 12698e24894aae11849f388835955704 741 Gene3D G3DSA:3.30.450.20 125 236 7.4E-13 T 12-10-2018 PA257_2255 12698e24894aae11849f388835955704 741 SUPERFAMILY SSF55785 99 225 3.49E-12 T 12-10-2018 IPR035965 PAS domain superfamily PA257_2255 12698e24894aae11849f388835955704 741 Pfam PF01627 Hpt domain 647 730 3.0E-13 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_2255 12698e24894aae11849f388835955704 741 Gene3D G3DSA:1.20.120.160 628 740 2.1E-18 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_2255 12698e24894aae11849f388835955704 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 472 1.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2255 12698e24894aae11849f388835955704 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 1.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2255 12698e24894aae11849f388835955704 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 1.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2255 12698e24894aae11849f388835955704 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 1.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2255 12698e24894aae11849f388835955704 741 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 473 3.0E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2255 12698e24894aae11849f388835955704 741 SMART SM00388 247 313 3.6E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2255 12698e24894aae11849f388835955704 741 SMART SM00448 498 614 8.4E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2255 12698e24894aae11849f388835955704 741 SUPERFAMILY SSF47384 230 314 1.12E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2255 12698e24894aae11849f388835955704 741 Pfam PF00072 Response regulator receiver domain 500 614 6.1E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2255 12698e24894aae11849f388835955704 741 Gene3D G3DSA:1.10.287.130 237 313 6.9E-21 T 12-10-2018 PA257_2255 12698e24894aae11849f388835955704 741 Gene3D G3DSA:3.30.565.10 314 476 1.1E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2255 12698e24894aae11849f388835955704 741 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 313 5.6E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2255 12698e24894aae11849f388835955704 741 SMART SM00387 360 475 5.7E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2255 12698e24894aae11849f388835955704 741 SMART SM00073 636 736 6.8E-4 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_2255 12698e24894aae11849f388835955704 741 Pfam PF08448 PAS fold 119 229 6.6E-9 T 12-10-2018 IPR013656 PAS fold-4 PA257_2255 12698e24894aae11849f388835955704 741 Gene3D G3DSA:3.40.50.2300 483 617 4.1E-31 T 12-10-2018 PA257_2255 12698e24894aae11849f388835955704 741 SUPERFAMILY SSF52172 497 657 6.07E-32 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2255 12698e24894aae11849f388835955704 741 SUPERFAMILY SSF47226 625 736 8.98E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_2255 12698e24894aae11849f388835955704 741 SUPERFAMILY SSF55874 303 471 3.14E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4435 b8b500da5a61f733de18e8ae45a8436d 368 SUPERFAMILY SSF110296 2 353 5.23E-59 T 12-10-2018 PA257_4435 b8b500da5a61f733de18e8ae45a8436d 368 Gene3D G3DSA:2.130.10.10 1 368 2.4E-103 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_0919 c4b61fdf1791b7821809c50801a427c1 307 Gene3D G3DSA:3.40.190.10 162 267 1.2E-63 T 12-10-2018 PA257_0919 c4b61fdf1791b7821809c50801a427c1 307 Pfam PF03466 LysR substrate binding domain 90 294 1.2E-39 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0919 c4b61fdf1791b7821809c50801a427c1 307 SUPERFAMILY SSF46785 4 112 1.87E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0919 c4b61fdf1791b7821809c50801a427c1 307 SUPERFAMILY SSF53850 90 300 7.06E-42 T 12-10-2018 PA257_0919 c4b61fdf1791b7821809c50801a427c1 307 Gene3D G3DSA:3.40.190.10 91 292 1.2E-63 T 12-10-2018 PA257_0919 c4b61fdf1791b7821809c50801a427c1 307 Gene3D G3DSA:1.10.10.10 3 88 2.3E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0919 c4b61fdf1791b7821809c50801a427c1 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.2E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1879 21c1269222122da998a64abb487f9e05 304 Pfam PF00005 ABC transporter 20 156 1.9E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1879 21c1269222122da998a64abb487f9e05 304 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1879 21c1269222122da998a64abb487f9e05 304 SUPERFAMILY SSF52540 3 218 2.31E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1879 21c1269222122da998a64abb487f9e05 304 SMART SM00382 28 214 1.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1879 21c1269222122da998a64abb487f9e05 304 Gene3D G3DSA:3.40.50.300 1 225 5.9E-58 T 12-10-2018 PA257_6855 c335d52ac931b1354e68fd8f4d0818c9 540 Gene3D G3DSA:3.40.50.2000 306 518 1.0E-25 T 12-10-2018 PA257_6855 c335d52ac931b1354e68fd8f4d0818c9 540 SUPERFAMILY SSF53756 306 480 9.42E-20 T 12-10-2018 PA257_6855 c335d52ac931b1354e68fd8f4d0818c9 540 Pfam PF13692 Glycosyl transferases group 1 376 459 2.3E-8 T 12-10-2018 PA257_2185 c496e844697096c439d604c785dd66da 429 SUPERFAMILY SSF53244 286 422 2.75E-26 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_2185 c496e844697096c439d604c785dd66da 429 Gene3D G3DSA:3.90.190.20 286 428 1.0E-25 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_2185 c496e844697096c439d604c785dd66da 429 Gene3D G3DSA:3.40.1190.10 1 284 7.1E-89 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_2185 c496e844697096c439d604c785dd66da 429 PIRSF PIRSF001563 1 426 2.9E-100 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 PA257_2185 c496e844697096c439d604c785dd66da 429 SUPERFAMILY SSF53623 3 283 1.12E-86 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_2185 c496e844697096c439d604c785dd66da 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 420 7.7E-93 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 PA257_2185 c496e844697096c439d604c785dd66da 429 Pfam PF08245 Mur ligase middle domain 47 186 5.8E-11 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PA257_6743 c3aefcc8041aa8926c318fcd04edf345 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 470 2.0E-73 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PA257_6743 c3aefcc8041aa8926c318fcd04edf345 499 Gene3D G3DSA:3.30.70.2740 350 431 9.6E-8 T 12-10-2018 PA257_6743 c3aefcc8041aa8926c318fcd04edf345 499 SUPERFAMILY SSF55103 204 473 4.41E-78 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PA257_6743 c3aefcc8041aa8926c318fcd04edf345 499 SUPERFAMILY SSF56176 19 231 7.01E-65 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_6743 c3aefcc8041aa8926c318fcd04edf345 499 Pfam PF01565 FAD binding domain 56 194 5.5E-36 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PA257_6743 c3aefcc8041aa8926c318fcd04edf345 499 Gene3D G3DSA:1.10.45.10 432 472 3.8E-9 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PA257_6743 c3aefcc8041aa8926c318fcd04edf345 499 Gene3D G3DSA:3.30.465.40 30 249 5.2E-59 T 12-10-2018 PA257_6743 c3aefcc8041aa8926c318fcd04edf345 499 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 59 470 2.1E-172 T 12-10-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 PA257_4968 d269641effb5f63d36695e754020b81c 298 Gene3D G3DSA:3.40.190.290 93 295 1.2E-40 T 12-10-2018 PA257_4968 d269641effb5f63d36695e754020b81c 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4968 d269641effb5f63d36695e754020b81c 298 SUPERFAMILY SSF53850 90 295 1.96E-43 T 12-10-2018 PA257_4968 d269641effb5f63d36695e754020b81c 298 Gene3D G3DSA:1.10.10.10 3 89 2.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4968 d269641effb5f63d36695e754020b81c 298 Pfam PF03466 LysR substrate binding domain 91 293 9.2E-43 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4968 d269641effb5f63d36695e754020b81c 298 SUPERFAMILY SSF46785 1 113 6.31E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0972 989cbfb1ec9ccdee77f67c654916ec14 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 5.5E-140 T 12-10-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 PA257_0972 989cbfb1ec9ccdee77f67c654916ec14 267 SUPERFAMILY SSF56529 3 267 1.03E-77 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_0972 989cbfb1ec9ccdee77f67c654916ec14 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 103 265 1.9E-7 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PA257_0972 989cbfb1ec9ccdee77f67c654916ec14 267 Gene3D G3DSA:3.90.850.10 1 267 1.4E-80 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_5454 2ebda5760d51f379d75082ec055790e0 244 Gene3D G3DSA:2.30.110.10 1 151 1.4E-50 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PA257_5454 2ebda5760d51f379d75082ec055790e0 244 Pfam PF10615 Protein of unknown function (DUF2470) 162 230 2.0E-13 T 12-10-2018 IPR019595 Domain of unknown function DUF2470 PA257_5454 2ebda5760d51f379d75082ec055790e0 244 Gene3D G3DSA:3.20.180.10 152 244 1.2E-39 T 12-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily PA257_5454 2ebda5760d51f379d75082ec055790e0 244 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 4 146 3.0E-14 T 12-10-2018 PA257_5454 2ebda5760d51f379d75082ec055790e0 244 SUPERFAMILY SSF50475 3 236 8.23E-57 T 12-10-2018 PA257_3383 57877e5d2b45266ac3025e7e61989ed3 316 Gene3D G3DSA:3.40.1190.20 4 308 1.5E-84 T 12-10-2018 IPR029056 Ribokinase-like PA257_3383 57877e5d2b45266ac3025e7e61989ed3 316 SUPERFAMILY SSF53613 2 309 1.34E-79 T 12-10-2018 IPR029056 Ribokinase-like PA257_3383 57877e5d2b45266ac3025e7e61989ed3 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 255 268 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PA257_3383 57877e5d2b45266ac3025e7e61989ed3 316 Pfam PF00294 pfkB family carbohydrate kinase 5 303 6.5E-59 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB PA257_4321 bc699f3fd82aa3a5f55ae0b9ea4e3187 111 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 81 2.1E-16 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4321 bc699f3fd82aa3a5f55ae0b9ea4e3187 111 SUPERFAMILY SSF160544 10 86 2.88E-19 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal PA257_4321 bc699f3fd82aa3a5f55ae0b9ea4e3187 111 Gene3D G3DSA:3.40.1690.10 9 87 5.9E-22 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal PA257_6702 3f33cc3f96e47c4d66dbacd0620ccfe1 526 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 442 3.2E-87 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain PA257_6702 3f33cc3f96e47c4d66dbacd0620ccfe1 526 SUPERFAMILY SSF53850 23 523 8.69E-137 T 12-10-2018 PA257_6702 3f33cc3f96e47c4d66dbacd0620ccfe1 526 Gene3D G3DSA:3.90.76.10 47 203 1.7E-150 T 12-10-2018 PA257_6702 3f33cc3f96e47c4d66dbacd0620ccfe1 526 Gene3D G3DSA:3.10.105.10 285 500 1.7E-150 T 12-10-2018 PA257_6702 3f33cc3f96e47c4d66dbacd0620ccfe1 526 Gene3D G3DSA:3.40.190.10 204 513 1.7E-150 T 12-10-2018 PA257_6702 3f33cc3f96e47c4d66dbacd0620ccfe1 526 PIRSF PIRSF002741 16 525 3.7E-102 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PA257_6625 6e088fb03019823aecad06cc9de6d1bf 255 Gene3D G3DSA:3.40.190.10 112 207 1.2E-20 T 12-10-2018 PA257_6625 6e088fb03019823aecad06cc9de6d1bf 255 SUPERFAMILY SSF53850 26 247 2.06E-31 T 12-10-2018 PA257_6625 6e088fb03019823aecad06cc9de6d1bf 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 247 1.1E-15 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6625 6e088fb03019823aecad06cc9de6d1bf 255 Gene3D G3DSA:3.40.190.10 31 247 1.2E-20 T 12-10-2018 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 188 204 8.9E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 135 148 8.9E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 247 262 8.9E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 8.9E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 8.9E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 8.9E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 8.9E-69 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 Pfam PF00311 Phosphoenolpyruvate carboxylase 131 878 1.0E-275 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 136 147 - T 12-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 SUPERFAMILY SSF51621 5 878 0.0 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 Gene3D G3DSA:1.20.1440.90 303 388 9.0E-25 T 12-10-2018 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 878 18.768 T 12-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_1534 4852e3bc1d13ccb58013be79ab2f6607 878 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 12-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 193 0.0029 T 12-10-2018 PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 Gene3D G3DSA:3.40.50.720 8 252 1.9E-72 T 12-10-2018 PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.7E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.7E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.7E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.7E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.7E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.7E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 SUPERFAMILY SSF51735 9 250 1.9E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 249 1.5E-55 T 12-10-2018 PA257_3931 4ef17272fcb57c92262bfda7a42e4f48 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_0193 4a93276c8a7f01a85d10dcfb14f83dab 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 359 379 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PA257_0193 4a93276c8a7f01a85d10dcfb14f83dab 468 TIGRFAM TIGR03173 pbuX: xanthine permease 28 443 2.6E-128 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 PA257_0193 4a93276c8a7f01a85d10dcfb14f83dab 468 Pfam PF00860 Permease family 25 410 2.0E-85 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PA257_0193 4a93276c8a7f01a85d10dcfb14f83dab 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 441 2.3E-112 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PA257_6400 8c4af83850f5f41cdeaa0db6f76c98aa 200 SUPERFAMILY SSF48452 3 196 9.48E-56 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6400 8c4af83850f5f41cdeaa0db6f76c98aa 200 Gene3D G3DSA:1.20.58.320 2 89 2.3E-18 T 12-10-2018 PA257_6400 8c4af83850f5f41cdeaa0db6f76c98aa 200 Gene3D G3DSA:1.25.40.10 90 200 2.0E-32 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6400 8c4af83850f5f41cdeaa0db6f76c98aa 200 Pfam PF06041 Bacterial protein of unknown function (DUF924) 9 197 1.8E-57 T 12-10-2018 IPR010323 Protein of unknown function DUF924 PA257_1775 94091c77c1018d0e3243be693d2481d3 344 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 334 26.314 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 PA257_1775 94091c77c1018d0e3243be693d2481d3 344 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 333 1.3E-139 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 PA257_1775 94091c77c1018d0e3243be693d2481d3 344 Pfam PF03116 NQR2, RnfD, RnfE family 7 332 6.4E-103 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 PA257_0032 ebaec6b59bf228ead22df3c330391837 325 SUPERFAMILY SSF51735 112 267 3.01E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0032 ebaec6b59bf228ead22df3c330391837 325 Gene3D G3DSA:3.90.180.10 12 319 4.2E-128 T 12-10-2018 PA257_0032 ebaec6b59bf228ead22df3c330391837 325 Pfam PF00107 Zinc-binding dehydrogenase 152 277 7.3E-27 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_0032 ebaec6b59bf228ead22df3c330391837 325 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 12-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PA257_0032 ebaec6b59bf228ead22df3c330391837 325 Gene3D G3DSA:3.40.50.720 124 269 4.2E-128 T 12-10-2018 PA257_0032 ebaec6b59bf228ead22df3c330391837 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 8.8E-9 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_0032 ebaec6b59bf228ead22df3c330391837 325 SUPERFAMILY SSF50129 8 142 1.31E-38 T 12-10-2018 IPR011032 GroES-like superfamily PA257_0032 ebaec6b59bf228ead22df3c330391837 325 SMART SM00829 11 323 3.3E-35 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_6901 3a65a7d41efec3c07f35217234d4d174 269 SUPERFAMILY SSF52540 4 214 2.5E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6901 3a65a7d41efec3c07f35217234d4d174 269 SMART SM00382 30 199 2.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6901 3a65a7d41efec3c07f35217234d4d174 269 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6901 3a65a7d41efec3c07f35217234d4d174 269 Gene3D G3DSA:3.40.50.300 1 228 4.9E-55 T 12-10-2018 PA257_6901 3a65a7d41efec3c07f35217234d4d174 269 Pfam PF00005 ABC transporter 21 149 1.1E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4814 6d01a82dc01999edd38e6b594791519a 236 SMART SM00849 1 146 2.0E-8 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_4814 6d01a82dc01999edd38e6b594791519a 236 SUPERFAMILY SSF56281 4 206 1.31E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_4814 6d01a82dc01999edd38e6b594791519a 236 Gene3D G3DSA:3.60.15.10 1 217 1.1E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_4814 6d01a82dc01999edd38e6b594791519a 236 Pfam PF12706 Beta-lactamase superfamily domain 6 188 3.1E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_1221 dc7440fdc0318fb653701aa972d34073 277 SUPERFAMILY SSF51197 3 277 5.49E-95 T 12-10-2018 PA257_1221 dc7440fdc0318fb653701aa972d34073 277 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 5 270 1.5E-66 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 PA257_1221 dc7440fdc0318fb653701aa972d34073 277 Gene3D G3DSA:3.60.130.10 1 277 1.6E-98 T 12-10-2018 PA257_1430 09a6031a8dc21a83301985ff4853e0f9 267 SUPERFAMILY SSF51182 23 185 5.34E-17 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_1430 09a6031a8dc21a83301985ff4853e0f9 267 SUPERFAMILY SSF46689 215 259 1.36E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1430 09a6031a8dc21a83301985ff4853e0f9 267 Gene3D G3DSA:2.60.120.10 13 95 9.3E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1430 09a6031a8dc21a83301985ff4853e0f9 267 SMART SM00342 176 258 3.0E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1430 09a6031a8dc21a83301985ff4853e0f9 267 Pfam PF12833 Helix-turn-helix domain 182 258 4.4E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1430 09a6031a8dc21a83301985ff4853e0f9 267 Pfam PF02311 AraC-like ligand binding domain 32 102 1.2E-4 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_1430 09a6031a8dc21a83301985ff4853e0f9 267 Gene3D G3DSA:1.10.10.60 160 264 8.5E-20 T 12-10-2018 PA257_5397 8bf24bf300f122323a783ad8bfc0488e 507 SUPERFAMILY SSF117457 318 487 8.5E-64 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 PA257_5397 8bf24bf300f122323a783ad8bfc0488e 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 486 4.3E-49 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PA257_5397 8bf24bf300f122323a783ad8bfc0488e 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 7.1E-102 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PA257_5397 8bf24bf300f122323a783ad8bfc0488e 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 286 2.0E-66 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PA257_5397 8bf24bf300f122323a783ad8bfc0488e 507 Pfam PF05683 Fumarase C-terminus 289 488 5.6E-80 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PA257_5397 8bf24bf300f122323a783ad8bfc0488e 507 PIRSF PIRSF001394 1 506 1.7E-226 T 12-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 PA257_5397 8bf24bf300f122323a783ad8bfc0488e 507 Gene3D G3DSA:3.20.130.10 314 488 5.8E-61 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 Gene3D G3DSA:3.40.50.2300 148 276 2.6E-118 T 12-10-2018 PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 SUPERFAMILY SSF53822 28 366 6.8E-100 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 Pfam PF13458 Periplasmic binding protein 29 365 4.4E-67 T 12-10-2018 IPR028081 Leucine-binding protein domain PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 Gene3D G3DSA:3.40.50.2300 31 349 2.6E-118 T 12-10-2018 PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 281 294 3.8E-52 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 3.8E-52 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 3.8E-52 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 3.8E-52 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 92 102 3.8E-52 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 3.8E-52 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_4747 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 3.8E-52 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_2341 01e3703dfc424eec2d64a194b0f6854d 374 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 10 207 3.3E-48 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal PA257_2341 01e3703dfc424eec2d64a194b0f6854d 374 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 115 131 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site PA257_2341 01e3703dfc424eec2d64a194b0f6854d 374 Gene3D G3DSA:3.40.47.10 221 374 1.9E-58 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2341 01e3703dfc424eec2d64a194b0f6854d 374 Gene3D G3DSA:3.40.47.10 1 215 6.6E-72 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2341 01e3703dfc424eec2d64a194b0f6854d 374 SUPERFAMILY SSF53901 4 212 6.87E-64 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2341 01e3703dfc424eec2d64a194b0f6854d 374 SUPERFAMILY SSF53901 175 372 1.14E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2341 01e3703dfc424eec2d64a194b0f6854d 374 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 370 2.5E-180 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 PA257_2341 01e3703dfc424eec2d64a194b0f6854d 374 SMART SM00825 Beta-ketoacyl synthase 6 374 2.5E-14 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PA257_2341 01e3703dfc424eec2d64a194b0f6854d 374 PIRSF PIRSF000447 1 374 4.2E-174 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 PA257_2341 01e3703dfc424eec2d64a194b0f6854d 374 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 215 329 1.7E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 SMART SM00382 303 494 1.5E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 SMART SM00382 30 228 2.4E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 Gene3D G3DSA:3.40.50.300 267 532 7.8E-85 T 12-10-2018 PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 Gene3D G3DSA:3.40.50.300 3 266 4.6E-85 T 12-10-2018 PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 496 527 1.8E-6 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 255 2.2E-4 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 Pfam PF00005 ABC transporter 22 178 4.2E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 SUPERFAMILY SSF52540 270 516 6.71E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 SUPERFAMILY SSF52540 4 254 2.34E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3672 520794f6119d20ae372a3b0f1e1d26d9 536 Pfam PF00005 ABC transporter 295 445 5.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0344 e1627e88c41fb13c5c2429864ef65952 329 SUPERFAMILY SSF50331 235 324 7.37E-8 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_0344 e1627e88c41fb13c5c2429864ef65952 329 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0344 e1627e88c41fb13c5c2429864ef65952 329 SUPERFAMILY SSF52540 3 243 1.77E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0344 e1627e88c41fb13c5c2429864ef65952 329 SMART SM00382 27 214 2.9E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0344 e1627e88c41fb13c5c2429864ef65952 329 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 3.4E-121 T 12-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 PA257_0344 e1627e88c41fb13c5c2429864ef65952 329 Pfam PF12857 TOBE-like domain 270 321 1.0E-11 T 12-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 PA257_0344 e1627e88c41fb13c5c2429864ef65952 329 Pfam PF00005 ABC transporter 18 164 1.2E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0344 e1627e88c41fb13c5c2429864ef65952 329 Gene3D G3DSA:3.40.50.300 2 277 6.8E-83 T 12-10-2018 PA257_6678 23d6aae0920ac124f96794f779922023 551 SUPERFAMILY SSF141868 291 536 1.15E-87 T 12-10-2018 IPR035919 EAL domain superfamily PA257_6678 23d6aae0920ac124f96794f779922023 551 Gene3D G3DSA:3.30.70.270 111 287 1.1E-41 T 12-10-2018 PA257_6678 23d6aae0920ac124f96794f779922023 551 Gene3D G3DSA:3.20.20.450 288 537 4.2E-98 T 12-10-2018 IPR035919 EAL domain superfamily PA257_6678 23d6aae0920ac124f96794f779922023 551 SUPERFAMILY SSF55073 122 277 1.65E-36 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_6678 23d6aae0920ac124f96794f779922023 551 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 113 268 6.9E-20 T 12-10-2018 IPR000160 GGDEF domain PA257_6678 23d6aae0920ac124f96794f779922023 551 Pfam PF00563 EAL domain 291 526 2.4E-73 T 12-10-2018 IPR001633 EAL domain PA257_6678 23d6aae0920ac124f96794f779922023 551 Pfam PF00990 Diguanylate cyclase, GGDEF domain 117 267 5.0E-32 T 12-10-2018 IPR000160 GGDEF domain PA257_6678 23d6aae0920ac124f96794f779922023 551 SMART SM00052 285 531 7.1E-110 T 12-10-2018 IPR001633 EAL domain PA257_6678 23d6aae0920ac124f96794f779922023 551 SMART SM00267 106 275 9.8E-39 T 12-10-2018 IPR000160 GGDEF domain PA257_0951 42d1107244ff7d86d48f826070dd2601 471 Pfam PF02321 Outer membrane efflux protein 276 463 2.1E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_0951 42d1107244ff7d86d48f826070dd2601 471 Pfam PF02321 Outer membrane efflux protein 58 241 6.2E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_0951 42d1107244ff7d86d48f826070dd2601 471 PIRSF PIRSF001892 1 471 4.6E-166 T 12-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 PA257_0951 42d1107244ff7d86d48f826070dd2601 471 Gene3D G3DSA:1.20.1600.10 57 469 5.8E-87 T 12-10-2018 PA257_0951 42d1107244ff7d86d48f826070dd2601 471 SUPERFAMILY SSF56954 50 465 3.01E-83 T 12-10-2018 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 Gene3D G3DSA:3.10.20.30 262 366 4.5E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 Pfam PF00175 Oxidoreductase NAD-binding domain 128 234 3.1E-14 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 Gene3D G3DSA:3.40.50.80 120 260 1.2E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 SUPERFAMILY SSF63380 13 117 1.86E-29 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 SUPERFAMILY SSF54292 243 365 7.6E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 SUPERFAMILY SSF52343 108 250 3.67E-37 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00406 Cytochrome B5 reductase signature 220 228 4.4E-9 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00406 Cytochrome B5 reductase signature 127 146 4.4E-9 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00406 Cytochrome B5 reductase signature 164 175 4.4E-9 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00406 Cytochrome B5 reductase signature 104 118 4.4E-9 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00406 Cytochrome B5 reductase signature 67 74 4.4E-9 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 Pfam PF00970 Oxidoreductase FAD-binding domain 25 116 5.4E-17 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 Gene3D G3DSA:2.40.30.10 14 117 1.3E-25 T 12-10-2018 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 316 324 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 290 359 1.5E-12 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 164 175 2.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 127 146 2.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 220 228 2.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_6806 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 67 74 2.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_3115 c4930216aea210f4c7b0ddbc15ee1fa7 102 Gene3D G3DSA:1.10.10.60 9 93 5.2E-12 T 12-10-2018 PA257_3115 c4930216aea210f4c7b0ddbc15ee1fa7 102 Pfam PF01527 Transposase 3 76 7.4E-21 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_3115 c4930216aea210f4c7b0ddbc15ee1fa7 102 SUPERFAMILY SSF46689 5 95 6.09E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2733 c4930216aea210f4c7b0ddbc15ee1fa7 102 Gene3D G3DSA:1.10.10.60 9 93 5.2E-12 T 12-10-2018 PA257_2733 c4930216aea210f4c7b0ddbc15ee1fa7 102 Pfam PF01527 Transposase 3 76 7.4E-21 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_2733 c4930216aea210f4c7b0ddbc15ee1fa7 102 SUPERFAMILY SSF46689 5 95 6.09E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2686 c4930216aea210f4c7b0ddbc15ee1fa7 102 Gene3D G3DSA:1.10.10.60 9 93 5.2E-12 T 12-10-2018 PA257_2686 c4930216aea210f4c7b0ddbc15ee1fa7 102 Pfam PF01527 Transposase 3 76 7.4E-21 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_2686 c4930216aea210f4c7b0ddbc15ee1fa7 102 SUPERFAMILY SSF46689 5 95 6.09E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6656 c4930216aea210f4c7b0ddbc15ee1fa7 102 Gene3D G3DSA:1.10.10.60 9 93 5.2E-12 T 12-10-2018 PA257_6656 c4930216aea210f4c7b0ddbc15ee1fa7 102 Pfam PF01527 Transposase 3 76 7.4E-21 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_6656 c4930216aea210f4c7b0ddbc15ee1fa7 102 SUPERFAMILY SSF46689 5 95 6.09E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4845 c4930216aea210f4c7b0ddbc15ee1fa7 102 Gene3D G3DSA:1.10.10.60 9 93 5.2E-12 T 12-10-2018 PA257_4845 c4930216aea210f4c7b0ddbc15ee1fa7 102 Pfam PF01527 Transposase 3 76 7.4E-21 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_4845 c4930216aea210f4c7b0ddbc15ee1fa7 102 SUPERFAMILY SSF46689 5 95 6.09E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0012 c4930216aea210f4c7b0ddbc15ee1fa7 102 Gene3D G3DSA:1.10.10.60 9 93 5.2E-12 T 12-10-2018 PA257_0012 c4930216aea210f4c7b0ddbc15ee1fa7 102 Pfam PF01527 Transposase 3 76 7.4E-21 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_0012 c4930216aea210f4c7b0ddbc15ee1fa7 102 SUPERFAMILY SSF46689 5 95 6.09E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3212 8fef1d680c160149cda6be33605221f5 342 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 8 337 3.9E-149 T 12-10-2018 IPR013399 CRISPR-associated protein Csy3 PA257_3212 8fef1d680c160149cda6be33605221f5 342 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 8 340 6.1E-136 T 12-10-2018 IPR013399 CRISPR-associated protein Csy3 PA257_5429 23caaa2026ac5963d774279b416bcc69 133 Pfam PF10000 ACT domain 2 69 1.0E-27 T 12-10-2018 IPR018717 Domain of unknown function DUF2241 PA257_5429 23caaa2026ac5963d774279b416bcc69 133 SUPERFAMILY SSF55021 70 128 2.44E-17 T 12-10-2018 PA257_5429 23caaa2026ac5963d774279b416bcc69 133 Gene3D G3DSA:3.30.2130.10 1 130 1.3E-46 T 12-10-2018 PA257_5429 23caaa2026ac5963d774279b416bcc69 133 SUPERFAMILY SSF55021 3 66 2.2E-17 T 12-10-2018 PA257_5429 23caaa2026ac5963d774279b416bcc69 133 Pfam PF13840 ACT domain 70 126 4.4E-11 T 12-10-2018 IPR027795 CASTOR, ACT domain PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 SUPERFAMILY SSF55961 171 451 1.49E-56 T 12-10-2018 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 Gene3D G3DSA:2.102.10.10 52 176 2.3E-97 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 9.4E-33 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 194 216 9.4E-33 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 151 177 9.4E-33 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 9.4E-33 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 9.4E-33 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 9.4E-33 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 SUPERFAMILY SSF50022 21 165 3.01E-47 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 Pfam PF00355 Rieske [2Fe-2S] domain 52 136 1.4E-22 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 Gene3D G3DSA:3.90.380.10 30 446 2.3E-97 T 12-10-2018 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 TIGRFAM TIGR03228 anthran_1_2_A: anthranilate 1,2-dioxygenase, large subunit 15 452 9.6E-297 T 12-10-2018 IPR017638 Anthranilate 1,2-dioxygenase, large subunit KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 95 118 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 PA257_3059 a79b9265198644e62306f44a04c3c1b9 464 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 394 1.4E-9 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 PA257_6454 897c9d3633b9f27494c0f24081323bf9 156 Pfam PF01047 MarR family 39 96 1.6E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_6454 897c9d3633b9f27494c0f24081323bf9 156 SMART SM00347 32 132 5.5E-24 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_6454 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 6.4E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_6454 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 6.4E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_6454 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 6.4E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_6454 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 6.4E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_6454 897c9d3633b9f27494c0f24081323bf9 156 SUPERFAMILY SSF46785 14 145 9.73E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6454 897c9d3633b9f27494c0f24081323bf9 156 Gene3D G3DSA:1.10.10.10 3 146 3.4E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6454 897c9d3633b9f27494c0f24081323bf9 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 71 105 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PA257_5987 b565538431fb1b23d020d29b8090d5c0 159 Gene3D G3DSA:2.40.280.10 4 132 2.5E-47 T 12-10-2018 IPR023620 Small protein B PA257_5987 b565538431fb1b23d020d29b8090d5c0 159 SUPERFAMILY SSF74982 5 136 1.22E-50 T 12-10-2018 IPR023620 Small protein B PA257_5987 b565538431fb1b23d020d29b8090d5c0 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 4.0E-68 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 PA257_5987 b565538431fb1b23d020d29b8090d5c0 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 154 2.0E-52 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 PA257_5987 b565538431fb1b23d020d29b8090d5c0 159 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site PA257_5987 b565538431fb1b23d020d29b8090d5c0 159 Pfam PF01668 SmpB protein 12 154 1.9E-58 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 PA257_5987 b565538431fb1b23d020d29b8090d5c0 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 71.799 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 PA257_3435 05dd55caca3f0c0552fb5a035c882c18 65 Pfam PF10734 Protein of unknown function (DUF2523) 1 47 6.2E-11 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 PA257_3445 05dd55caca3f0c0552fb5a035c882c18 65 Pfam PF10734 Protein of unknown function (DUF2523) 1 47 6.2E-11 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 PA257_3463 05dd55caca3f0c0552fb5a035c882c18 65 Pfam PF10734 Protein of unknown function (DUF2523) 1 47 6.2E-11 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 PA257_3454 05dd55caca3f0c0552fb5a035c882c18 65 Pfam PF10734 Protein of unknown function (DUF2523) 1 47 6.2E-11 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 SUPERFAMILY SSF53335 65 253 3.12E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 Gene3D G3DSA:3.40.50.150 64 253 9.5E-48 T 12-10-2018 PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 SUPERFAMILY SSF48452 330 415 1.82E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 SMART SM00138 3 259 7.6E-40 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 Pfam PF01739 CheR methyltransferase, SAM binding domain 66 240 7.5E-37 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 PRINTS PR00996 Glutamate methyltransferase family signature 130 146 2.9E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 PRINTS PR00996 Glutamate methyltransferase family signature 218 241 2.9E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 PRINTS PR00996 Glutamate methyltransferase family signature 58 70 2.9E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 PRINTS PR00996 Glutamate methyltransferase family signature 97 117 2.9E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 PRINTS PR00996 Glutamate methyltransferase family signature 199 213 2.9E-24 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1515 a69caeec3fbb5678f1b3e558feb9fa5d 422 Gene3D G3DSA:1.25.40.10 314 418 1.4E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5840 9e91c467c2e1334779d8898da4209666 457 Pfam PF07690 Major Facilitator Superfamily 21 381 2.1E-45 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_5840 9e91c467c2e1334779d8898da4209666 457 Gene3D G3DSA:1.20.1250.20 11 214 3.9E-38 T 12-10-2018 PA257_5840 9e91c467c2e1334779d8898da4209666 457 SUPERFAMILY SSF103473 9 436 6.15E-64 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_5840 9e91c467c2e1334779d8898da4209666 457 Gene3D G3DSA:1.20.1250.20 231 430 1.9E-22 T 12-10-2018 PA257_0358 3ed1e9bfda7701d56aabdf53c7a06404 368 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 363 2.8E-129 T 12-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PA257_0358 3ed1e9bfda7701d56aabdf53c7a06404 368 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 6 364 3.8E-184 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PA257_0358 3ed1e9bfda7701d56aabdf53c7a06404 368 Hamap MF_01841 Agmatine deiminase [aguA]. 6 364 62.967 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PA257_0358 3ed1e9bfda7701d56aabdf53c7a06404 368 Gene3D G3DSA:3.75.10.10 2 367 1.1E-153 T 12-10-2018 PA257_0358 3ed1e9bfda7701d56aabdf53c7a06404 368 SUPERFAMILY SSF55909 5 364 1.14E-146 T 12-10-2018 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF00575 S1 RNA binding domain 135 197 7.6E-8 T 12-10-2018 IPR003029 S1 domain GO:0003676 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:3.30.300.20 201 279 9.8E-29 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 442 491 1.1E-21 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 415 1.4E-21 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 344 5.4E-123 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF08529 NusA N-terminal domain 4 125 5.0E-38 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:1.10.150.20 356 423 7.9E-29 T 12-10-2018 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF13184 NusA-like KH domain 232 299 4.1E-26 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 SMART SM00316 135 202 4.7E-12 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF69705 1 128 7.72E-39 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:3.30.300.20 280 348 1.4E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:1.10.150.20 433 491 2.7E-21 T 12-10-2018 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF54814 281 344 1.5E-14 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF54814 202 280 1.63E-27 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:2.40.50.140 137 200 5.0E-21 T 12-10-2018 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF14520 Helix-hairpin-helix domain 434 488 9.9E-10 T 12-10-2018 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF47794 432 492 1.38E-15 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:3.30.1480.10 1 131 2.4E-42 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF47794 357 418 2.2E-17 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 28.844 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 PA257_5960 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF50249 134 201 3.82E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_1588 3ed5656cd1a3bf169d767ca13b889b71 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 108 115 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PA257_1588 3ed5656cd1a3bf169d767ca13b889b71 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 227 2.4E-64 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PA257_1588 3ed5656cd1a3bf169d767ca13b889b71 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 8 232 41.354 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PA257_1588 3ed5656cd1a3bf169d767ca13b889b71 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 230 5.0E-76 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PA257_1588 3ed5656cd1a3bf169d767ca13b889b71 234 Gene3D G3DSA:3.90.550.10 7 233 7.2E-69 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_1588 3ed5656cd1a3bf169d767ca13b889b71 234 SUPERFAMILY SSF53448 10 230 5.18E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 Pfam PF02803 Thiolase, C-terminal domain 271 390 4.0E-51 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 2.1E-149 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 SUPERFAMILY SSF53901 272 390 1.09E-43 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 SUPERFAMILY SSF53901 3 270 4.32E-93 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 PIRSF PIRSF000429 1 392 1.3E-132 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 Gene3D G3DSA:3.40.47.10 6 276 2.5E-159 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.2E-106 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 Gene3D G3DSA:3.40.47.10 126 388 2.5E-159 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 PA257_3738 6a13506ba4814dd2698b1d7a7bc713a8 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PA257_4208 34b0f6804102a6577d29b5cdb4f935e6 281 SUPERFAMILY SSF51735 3 165 7.88E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4208 34b0f6804102a6577d29b5cdb4f935e6 281 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 162 2.2E-44 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PA257_4208 34b0f6804102a6577d29b5cdb4f935e6 281 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 220 3.0E-13 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PA257_4208 34b0f6804102a6577d29b5cdb4f935e6 281 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_4208 34b0f6804102a6577d29b5cdb4f935e6 281 Gene3D G3DSA:1.10.1040.10 164 238 7.8E-16 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_4208 34b0f6804102a6577d29b5cdb4f935e6 281 SUPERFAMILY SSF48179 164 225 3.06E-16 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_4208 34b0f6804102a6577d29b5cdb4f935e6 281 Gene3D G3DSA:3.40.50.720 1 163 7.6E-48 T 12-10-2018 PA257_4208 34b0f6804102a6577d29b5cdb4f935e6 281 PIRSF PIRSF000103 1 236 1.1E-55 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_4530 1fee16d41c50302f80deea57e1aac8f8 314 SUPERFAMILY SSF54506 2 312 2.04E-100 T 12-10-2018 PA257_4530 1fee16d41c50302f80deea57e1aac8f8 314 Pfam PF05544 Proline racemase 6 312 6.6E-111 T 12-10-2018 IPR008794 Proline racemase family PA257_4530 1fee16d41c50302f80deea57e1aac8f8 314 Gene3D G3DSA:3.10.310.10 134 290 2.4E-118 T 12-10-2018 PA257_4530 1fee16d41c50302f80deea57e1aac8f8 314 Gene3D G3DSA:3.10.310.10 6 308 2.4E-118 T 12-10-2018 PA257_4530 1fee16d41c50302f80deea57e1aac8f8 314 PIRSF PIRSF029792 1 313 1.1E-94 T 12-10-2018 IPR008794 Proline racemase family PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 Gene3D G3DSA:3.30.450.20 431 547 5.8E-17 T 12-10-2018 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 Gene3D G3DSA:3.30.565.10 764 919 2.0E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 Gene3D G3DSA:3.30.450.20 301 417 5.4E-7 T 12-10-2018 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 SUPERFAMILY SSF55785 418 547 9.22E-14 T 12-10-2018 IPR035965 PAS domain superfamily PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 Gene3D G3DSA:3.30.450.20 552 684 2.8E-18 T 12-10-2018 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 Gene3D G3DSA:1.10.287.130 685 758 4.9E-13 T 12-10-2018 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 Pfam PF08448 PAS fold 567 676 1.1E-8 T 12-10-2018 IPR013656 PAS fold-4 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 Pfam PF00512 His Kinase A (phospho-acceptor) domain 690 756 3.2E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 877 895 3.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 860 3.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 864 874 3.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 900 913 3.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 SMART SM00387 802 916 8.2E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 SMART SM00388 690 760 8.5E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 SMART SM00091 561 627 8.8E-5 T 12-10-2018 IPR000014 PAS domain PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 SMART SM00091 433 502 3.4 T 12-10-2018 IPR000014 PAS domain PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 803 915 3.2E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 SUPERFAMILY SSF55874 751 916 6.02E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 557 682 1.7E-9 T 12-10-2018 IPR000014 PAS domain PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 Pfam PF08447 PAS fold 460 541 1.9E-8 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 SUPERFAMILY SSF55785 546 671 2.79E-18 T 12-10-2018 IPR035965 PAS domain superfamily PA257_5354 e5c3784cad37a15dbe5843a962638b44 923 SUPERFAMILY SSF47384 685 757 6.08E-8 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4434 d89f72079cb8a9d7ba25d8010d5a744f 158 SUPERFAMILY SSF55826 4 152 1.31E-40 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_4434 d89f72079cb8a9d7ba25d8010d5a744f 158 Pfam PF04073 Aminoacyl-tRNA editing domain 25 139 8.7E-26 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PA257_4434 d89f72079cb8a9d7ba25d8010d5a744f 158 Gene3D G3DSA:3.90.960.10 1 156 8.2E-45 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 Gene3D G3DSA:3.40.50.2300 1 135 1.2E-71 T 12-10-2018 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 SUPERFAMILY SSF52172 3 188 8.08E-10 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4717 8062ef7305f5987b36d342680dedd65b 490 SUPERFAMILY SSF52540 146 387 4.57E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4717 8062ef7305f5987b36d342680dedd65b 490 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 461 1.6E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 461 481 1.6E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 Gene3D G3DSA:1.10.8.60 318 394 3.1E-29 T 12-10-2018 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 Gene3D G3DSA:1.10.10.60 425 482 3.2E-12 T 12-10-2018 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 SMART SM00382 166 310 8.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4717 8062ef7305f5987b36d342680dedd65b 490 Pfam PF02954 Bacterial regulatory protein, Fis family 438 478 2.0E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 Pfam PF06490 Flagellar regulatory protein FleQ 6 123 5.0E-30 T 12-10-2018 IPR010518 Flagellar regulatory FleQ PA257_4717 8062ef7305f5987b36d342680dedd65b 490 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_4717 8062ef7305f5987b36d342680dedd65b 490 SUPERFAMILY SSF46689 434 480 1.7E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 Pfam PF00158 Sigma-54 interaction domain 146 313 3.8E-76 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_4717 8062ef7305f5987b36d342680dedd65b 490 Gene3D G3DSA:3.40.50.300 136 317 2.0E-68 T 12-10-2018 PA257_0838 397f374ffa27cc6b634f1a88a3a5d2aa 228 Gene3D G3DSA:3.30.1140.32 108 208 8.5E-47 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0838 397f374ffa27cc6b634f1a88a3a5d2aa 228 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 40.232 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PA257_0838 397f374ffa27cc6b634f1a88a3a5d2aa 228 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0838 397f374ffa27cc6b634f1a88a3a5d2aa 228 Gene3D G3DSA:3.30.300.20 18 107 1.3E-29 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_0838 397f374ffa27cc6b634f1a88a3a5d2aa 228 SUPERFAMILY SSF54821 108 206 9.94E-43 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0838 397f374ffa27cc6b634f1a88a3a5d2aa 228 SUPERFAMILY SSF54814 2 106 7.85E-39 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PA257_0838 397f374ffa27cc6b634f1a88a3a5d2aa 228 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.1E-99 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PA257_0838 397f374ffa27cc6b634f1a88a3a5d2aa 228 SMART SM00322 60 125 3.0E-9 T 12-10-2018 IPR004087 K Homology domain GO:0003676 PA257_0838 397f374ffa27cc6b634f1a88a3a5d2aa 228 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.2E-42 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0838 397f374ffa27cc6b634f1a88a3a5d2aa 228 Pfam PF07650 KH domain 38 111 4.2E-22 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_4987 ed47151e58482d41fcbc1083031df74e 260 Pfam PF14518 Iron-containing redox enzyme 56 232 1.1E-14 T 12-10-2018 PA257_4987 ed47151e58482d41fcbc1083031df74e 260 Gene3D G3DSA:1.20.910.10 1 259 1.4E-100 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_4987 ed47151e58482d41fcbc1083031df74e 260 SUPERFAMILY SSF48613 19 243 5.44E-44 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_0249 fba9a45ac138c902f2d214a6830b27a9 352 Pfam PF13416 Bacterial extracellular solute-binding protein 51 316 9.0E-42 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_0249 fba9a45ac138c902f2d214a6830b27a9 352 Gene3D G3DSA:3.40.190.10 35 330 2.8E-117 T 12-10-2018 PA257_0249 fba9a45ac138c902f2d214a6830b27a9 352 Gene3D G3DSA:3.40.190.10 135 336 2.8E-117 T 12-10-2018 PA257_0249 fba9a45ac138c902f2d214a6830b27a9 352 SUPERFAMILY SSF53850 31 349 6.52E-64 T 12-10-2018 PA257_4248 355b8b23246fb06cbf8fe2964c8e3973 279 Gene3D G3DSA:1.10.10.60 10 54 7.9E-14 T 12-10-2018 PA257_4248 355b8b23246fb06cbf8fe2964c8e3973 279 Gene3D G3DSA:1.10.357.10 100 235 1.8E-12 T 12-10-2018 PA257_4248 355b8b23246fb06cbf8fe2964c8e3973 279 SUPERFAMILY SSF46689 14 76 1.84E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4248 355b8b23246fb06cbf8fe2964c8e3973 279 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 8.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0831 ef7e2a96573d984c49c1b1c2312d14d0 94 Gene3D G3DSA:3.30.70.600 1 94 3.2E-35 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily PA257_0831 ef7e2a96573d984c49c1b1c2312d14d0 94 SMART SM01403 1 92 1.6E-50 T 12-10-2018 IPR027486 Ribosomal protein S10 domain PA257_0831 ef7e2a96573d984c49c1b1c2312d14d0 94 PRINTS PR00971 Ribosomal protein S10 family signature 52 66 4.2E-10 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0831 ef7e2a96573d984c49c1b1c2312d14d0 94 PRINTS PR00971 Ribosomal protein S10 family signature 31 46 4.2E-10 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0831 ef7e2a96573d984c49c1b1c2312d14d0 94 ProSitePatterns PS00361 Ribosomal protein S10 signature. 20 35 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0831 ef7e2a96573d984c49c1b1c2312d14d0 94 Pfam PF00338 Ribosomal protein S10p/S20e 1 91 1.3E-33 T 12-10-2018 IPR027486 Ribosomal protein S10 domain PA257_0831 ef7e2a96573d984c49c1b1c2312d14d0 94 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 1 92 1.6E-42 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0831 ef7e2a96573d984c49c1b1c2312d14d0 94 SUPERFAMILY SSF54999 1 92 3.53E-34 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily PA257_0831 ef7e2a96573d984c49c1b1c2312d14d0 94 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 1 93 22.11 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_5789 c8345e1ca0dad9808f08ab02d6ffc6aa 125 Gene3D G3DSA:2.40.10.220 1 125 1.2E-42 T 12-10-2018 PA257_5789 c8345e1ca0dad9808f08ab02d6ffc6aa 125 PIRSF PIRSF028141 4 123 1.6E-39 T 12-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type PA257_5789 c8345e1ca0dad9808f08ab02d6ffc6aa 125 SUPERFAMILY SSF141371 1 123 4.32E-39 T 12-10-2018 PA257_5789 c8345e1ca0dad9808f08ab02d6ffc6aa 125 Pfam PF07238 PilZ domain 7 103 4.0E-12 T 12-10-2018 IPR009875 PilZ domain GO:0035438 PA257_0666 fe73c8b6ebffba6ed01b078518533abe 612 Gene3D G3DSA:3.40.50.410 422 601 9.0E-13 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_0666 fe73c8b6ebffba6ed01b078518533abe 612 SMART SM00327 421 604 6.7E-21 T 12-10-2018 IPR002035 von Willebrand factor, type A PA257_0666 fe73c8b6ebffba6ed01b078518533abe 612 SUPERFAMILY SSF53300 424 608 8.71E-19 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_0666 fe73c8b6ebffba6ed01b078518533abe 612 Pfam PF00092 von Willebrand factor type A domain 427 575 2.8E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 Gene3D G3DSA:3.30.420.40 258 504 1.2E-94 T 12-10-2018 PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 Hamap MF_00186 Glycerol kinase [glpK]. 7 501 59.451 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 Gene3D G3DSA:3.30.420.40 5 257 2.8E-113 T 12-10-2018 PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 8 500 1.4E-227 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 366 386 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 256 1.4E-87 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 139 151 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 265 455 5.8E-62 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 SUPERFAMILY SSF53067 258 500 1.51E-85 T 12-10-2018 PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 PIRSF PIRSF000538 7 504 7.3E-180 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PA257_1694 3399c410cd2e669d9f592fb75cee140a 505 SUPERFAMILY SSF53067 8 259 2.46E-96 T 12-10-2018 PA257_6213 445d0d63298a5433fb056e824415a552 148 Gene3D G3DSA:3.10.430.100 62 148 5.0E-26 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily PA257_6213 445d0d63298a5433fb056e824415a552 148 Gene3D G3DSA:3.40.5.10 1 50 2.2E-22 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6213 445d0d63298a5433fb056e824415a552 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 9.4E-48 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6213 445d0d63298a5433fb056e824415a552 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6213 445d0d63298a5433fb056e824415a552 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.5E-20 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6213 445d0d63298a5433fb056e824415a552 148 SUPERFAMILY SSF55658 1 56 4.53E-18 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PA257_6213 445d0d63298a5433fb056e824415a552 148 SUPERFAMILY SSF55653 60 148 4.45E-24 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily PA257_6213 445d0d63298a5433fb056e824415a552 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 3.4E-23 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal PA257_6213 445d0d63298a5433fb056e824415a552 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.083 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6230 fe8205643233c14307ca03bc1d0db1bd 475 SMART SM00646 239 397 1.8E-71 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PA257_6230 fe8205643233c14307ca03bc1d0db1bd 475 Gene3D G3DSA:2.60.40.3500 23 136 3.6E-30 T 12-10-2018 PA257_6230 fe8205643233c14307ca03bc1d0db1bd 475 SMART SM00257 425 468 5.7E-12 T 12-10-2018 IPR018392 LysM domain PA257_6230 fe8205643233c14307ca03bc1d0db1bd 475 SUPERFAMILY SSF54106 425 468 4.32E-10 T 12-10-2018 PA257_6230 fe8205643233c14307ca03bc1d0db1bd 475 Pfam PF01476 LysM domain 426 468 1.8E-11 T 12-10-2018 IPR018392 LysM domain PA257_6230 fe8205643233c14307ca03bc1d0db1bd 475 Gene3D G3DSA:3.10.350.10 415 473 6.9E-14 T 12-10-2018 IPR036779 LysM domain superfamily PA257_6230 fe8205643233c14307ca03bc1d0db1bd 475 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 179 397 1.9E-46 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PA257_6230 fe8205643233c14307ca03bc1d0db1bd 475 SUPERFAMILY SSF53187 177 401 1.26E-54 T 12-10-2018 PA257_6230 fe8205643233c14307ca03bc1d0db1bd 475 Gene3D G3DSA:3.40.630.40 168 405 1.1E-76 T 12-10-2018 PA257_6230 fe8205643233c14307ca03bc1d0db1bd 475 Pfam PF11741 AMIN domain 34 133 7.0E-23 T 12-10-2018 IPR021731 AMIN domain PA257_0469 5628a0e25cd02ffdbac3e72b75ce7565 197 Pfam PF02325 YGGT family 14 83 2.2E-19 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 PA257_0469 5628a0e25cd02ffdbac3e72b75ce7565 197 Pfam PF02325 YGGT family 110 179 1.2E-20 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 Pfam PF03466 LysR substrate binding domain 89 277 2.4E-15 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 SUPERFAMILY SSF46785 2 110 4.99E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 Gene3D G3DSA:3.40.190.290 90 292 1.3E-65 T 12-10-2018 PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 Gene3D G3DSA:1.10.10.10 1 81 1.8E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 SUPERFAMILY SSF53850 84 289 2.71E-22 T 12-10-2018 PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 295 55.892 T 12-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 290 3.9E-113 T 12-10-2018 IPR017685 HTH-type transcriptional regulator ArgP PA257_5428 4c2f3f53a49297ae480cc76157db92d8 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.9E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3642 227cd3d0ed6bc7dc312d1613ea149b56 912 SMART SM00965 94 145 2.4E-12 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_3642 227cd3d0ed6bc7dc312d1613ea149b56 912 Gene3D G3DSA:2.40.170.20 304 912 1.2E-55 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_3642 227cd3d0ed6bc7dc312d1613ea149b56 912 Gene3D G3DSA:2.170.130.10 177 303 7.4E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_3642 227cd3d0ed6bc7dc312d1613ea149b56 912 Gene3D G3DSA:3.55.50.30 65 174 1.5E-22 T 12-10-2018 PA257_3642 227cd3d0ed6bc7dc312d1613ea149b56 912 SUPERFAMILY SSF56935 163 912 3.66E-99 T 12-10-2018 PA257_3642 227cd3d0ed6bc7dc312d1613ea149b56 912 Pfam PF07715 TonB-dependent Receptor Plug Domain 179 296 3.7E-23 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_3642 227cd3d0ed6bc7dc312d1613ea149b56 912 Pfam PF07660 Secretin and TonB N terminus short domain 96 144 1.6E-8 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_3642 227cd3d0ed6bc7dc312d1613ea149b56 912 Pfam PF00593 TonB dependent receptor 412 910 2.4E-44 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_5559 00dfc4ada837187d251fe147e657d270 212 Pfam PF06672 Protein of unknown function (DUF1175) 21 210 2.3E-77 T 12-10-2018 IPR009558 Protein of unknown function DUF1175 PA257_5559 00dfc4ada837187d251fe147e657d270 212 Gene3D G3DSA:3.90.1720.10 36 197 9.2E-8 T 12-10-2018 PA257_3102 9c45d9628590609d9be8a8831ba00dc5 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 98 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_3102 9c45d9628590609d9be8a8831ba00dc5 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_3102 9c45d9628590609d9be8a8831ba00dc5 448 SUPERFAMILY SSF103473 1 442 2.75E-78 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3102 9c45d9628590609d9be8a8831ba00dc5 448 Pfam PF07690 Major Facilitator Superfamily 33 343 2.4E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0243 eadf80ad184c48c81da7ba8ea9fc7793 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 7.7E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0243 eadf80ad184c48c81da7ba8ea9fc7793 309 SUPERFAMILY SSF46785 7 85 5.8E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0243 eadf80ad184c48c81da7ba8ea9fc7793 309 Gene3D G3DSA:3.40.190.290 98 302 1.3E-35 T 12-10-2018 PA257_0243 eadf80ad184c48c81da7ba8ea9fc7793 309 Gene3D G3DSA:1.10.10.10 7 93 3.7E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0243 eadf80ad184c48c81da7ba8ea9fc7793 309 Pfam PF03466 LysR substrate binding domain 96 297 3.0E-35 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0243 eadf80ad184c48c81da7ba8ea9fc7793 309 SUPERFAMILY SSF53850 97 297 5.43E-28 T 12-10-2018 PA257_6375 200f0a4e9ccfc69585945cfec8052f5a 116 Pfam PF01042 Endoribonuclease L-PSP 5 114 1.8E-25 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PA257_6375 200f0a4e9ccfc69585945cfec8052f5a 116 SUPERFAMILY SSF55298 4 115 6.6E-31 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_6375 200f0a4e9ccfc69585945cfec8052f5a 116 Gene3D G3DSA:3.30.1330.40 1 116 2.1E-40 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_1204 e0cc21d46faccab80097d40cf4f9e8ff 449 Gene3D G3DSA:3.40.50.300 214 402 8.8E-47 T 12-10-2018 PA257_1204 e0cc21d46faccab80097d40cf4f9e8ff 449 SMART SM00487 20 222 2.7E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_1204 e0cc21d46faccab80097d40cf4f9e8ff 449 SUPERFAMILY SSF52540 74 359 5.71E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1204 e0cc21d46faccab80097d40cf4f9e8ff 449 Gene3D G3DSA:3.40.50.300 1 210 8.3E-77 T 12-10-2018 PA257_1204 e0cc21d46faccab80097d40cf4f9e8ff 449 Pfam PF00270 DEAD/DEAH box helicase 25 194 7.2E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_1204 e0cc21d46faccab80097d40cf4f9e8ff 449 Pfam PF00271 Helicase conserved C-terminal domain 231 339 3.9E-28 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1204 e0cc21d46faccab80097d40cf4f9e8ff 449 SMART SM00490 258 339 8.0E-30 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1204 e0cc21d46faccab80097d40cf4f9e8ff 449 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PA257_1207 9a7779bfad177ec830658d72300b0349 209 Pfam PF00072 Response regulator receiver domain 4 115 2.3E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1207 9a7779bfad177ec830658d72300b0349 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1207 9a7779bfad177ec830658d72300b0349 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1207 9a7779bfad177ec830658d72300b0349 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1207 9a7779bfad177ec830658d72300b0349 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 4.6E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1207 9a7779bfad177ec830658d72300b0349 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1207 9a7779bfad177ec830658d72300b0349 209 SMART SM00421 145 202 6.3E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1207 9a7779bfad177ec830658d72300b0349 209 Gene3D G3DSA:1.10.10.10 139 207 1.5E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1207 9a7779bfad177ec830658d72300b0349 209 SUPERFAMILY SSF52172 1 128 9.25E-32 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1207 9a7779bfad177ec830658d72300b0349 209 SMART SM00448 2 114 7.6E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1207 9a7779bfad177ec830658d72300b0349 209 Gene3D G3DSA:3.40.50.2300 2 128 8.0E-33 T 12-10-2018 PA257_1207 9a7779bfad177ec830658d72300b0349 209 SUPERFAMILY SSF46894 137 208 7.14E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_2540 cb98fded47764efeafd3ced5aa270840 182 SUPERFAMILY SSF161098 84 172 3.53E-18 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2540 cb98fded47764efeafd3ced5aa270840 182 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 86 5.9E-16 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2540 cb98fded47764efeafd3ced5aa270840 182 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 52 65 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site PA257_2540 cb98fded47764efeafd3ced5aa270840 182 SUPERFAMILY SSF53850 27 87 2.39E-15 T 12-10-2018 PA257_2540 cb98fded47764efeafd3ced5aa270840 182 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 179 2.3E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_2540 cb98fded47764efeafd3ced5aa270840 182 Gene3D G3DSA:1.10.3720.10 86 179 1.2E-23 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2540 cb98fded47764efeafd3ced5aa270840 182 Gene3D G3DSA:3.40.190.10 35 85 4.9E-18 T 12-10-2018 PA257_4543 fe851de032b31d8595d74e17d44d10d3 240 SUPERFAMILY SSF52540 1 234 9.13E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4543 fe851de032b31d8595d74e17d44d10d3 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4543 fe851de032b31d8595d74e17d44d10d3 240 Pfam PF00005 ABC transporter 18 165 7.8E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4543 fe851de032b31d8595d74e17d44d10d3 240 PIRSF PIRSF039085 1 240 4.1E-103 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PA257_4543 fe851de032b31d8595d74e17d44d10d3 240 Gene3D G3DSA:3.40.50.300 1 240 8.7E-72 T 12-10-2018 PA257_4543 fe851de032b31d8595d74e17d44d10d3 240 SMART SM00382 26 213 1.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1575 949d2900e2642024d7d41d436471c689 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 260 5.3E-6 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_1575 949d2900e2642024d7d41d436471c689 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 201 219 6.8E-4 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_1575 949d2900e2642024d7d41d436471c689 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 149 183 1.4E-6 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_1575 949d2900e2642024d7d41d436471c689 353 Gene3D G3DSA:3.40.1390.10 2 101 1.5E-36 T 12-10-2018 PA257_1575 949d2900e2642024d7d41d436471c689 353 Gene3D G3DSA:2.160.10.10 102 312 1.1E-66 T 12-10-2018 PA257_1575 949d2900e2642024d7d41d436471c689 353 SUPERFAMILY SSF51161 35 320 3.73E-80 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_1575 949d2900e2642024d7d41d436471c689 353 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 109 137 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PA257_1575 949d2900e2642024d7d41d436471c689 353 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 12 329 36.371 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 PA257_1575 949d2900e2642024d7d41d436471c689 353 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 25 92 3.3E-22 T 12-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 PA257_1575 949d2900e2642024d7d41d436471c689 353 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 11 332 1.5E-118 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 PA257_2063 1de4622dbad867963593c13b598e6d1e 187 SUPERFAMILY SSF50891 25 185 8.77E-57 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_2063 1de4622dbad867963593c13b598e6d1e 187 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 29 185 1.2E-47 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PA257_2063 1de4622dbad867963593c13b598e6d1e 187 Gene3D G3DSA:2.40.100.10 24 186 3.7E-64 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_2063 1de4622dbad867963593c13b598e6d1e 187 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 63 80 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PA257_2063 1de4622dbad867963593c13b598e6d1e 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 2.4E-8 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PA257_2063 1de4622dbad867963593c13b598e6d1e 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 2.4E-8 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PA257_2063 1de4622dbad867963593c13b598e6d1e 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 68 80 2.4E-8 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PA257_0550 31fe6e0e8bb1c76e172126eec493c4bd 168 SUPERFAMILY SSF50341 20 158 2.22E-9 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_0550 31fe6e0e8bb1c76e172126eec493c4bd 168 SMART SM00260 21 159 8.2E-16 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_0550 31fe6e0e8bb1c76e172126eec493c4bd 168 Pfam PF01584 CheW-like domain 26 158 1.9E-10 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_4648 25b3f7c5ef66f67e18093a542955f7de 69 PRINTS PR00050 Cold shock protein signature 27 36 4.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_4648 25b3f7c5ef66f67e18093a542955f7de 69 PRINTS PR00050 Cold shock protein signature 42 60 4.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_4648 25b3f7c5ef66f67e18093a542955f7de 69 PRINTS PR00050 Cold shock protein signature 7 22 4.3E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_4648 25b3f7c5ef66f67e18093a542955f7de 69 Gene3D G3DSA:2.40.50.140 6 68 7.3E-28 T 12-10-2018 PA257_4648 25b3f7c5ef66f67e18093a542955f7de 69 PIRSF PIRSF002599 1 69 1.4E-22 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 PA257_4648 25b3f7c5ef66f67e18093a542955f7de 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 12-10-2018 IPR019844 Cold-shock conserved site PA257_4648 25b3f7c5ef66f67e18093a542955f7de 69 SMART SM00357 6 69 2.3E-26 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 PA257_4648 25b3f7c5ef66f67e18093a542955f7de 69 Pfam PF00313 'Cold-shock' DNA-binding domain 7 68 1.3E-27 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_4648 25b3f7c5ef66f67e18093a542955f7de 69 SUPERFAMILY SSF50249 4 67 3.81E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_3096 6a037217422bb5e4efbeed2dcc93e03d 589 SUPERFAMILY SSF74863 31 141 9.68E-35 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily PA257_3096 6a037217422bb5e4efbeed2dcc93e03d 589 Gene3D G3DSA:2.60.40.1250 23 153 4.3E-39 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily PA257_3096 6a037217422bb5e4efbeed2dcc93e03d 589 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 179 357 2.3E-10 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PA257_3096 6a037217422bb5e4efbeed2dcc93e03d 589 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 586 38.513 T 12-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PA257_3096 6a037217422bb5e4efbeed2dcc93e03d 589 Pfam PF11412 Disulphide bond corrector protein DsbC 32 138 8.5E-31 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PA257_3096 6a037217422bb5e4efbeed2dcc93e03d 589 SUPERFAMILY SSF52833 482 580 2.47E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_3096 6a037217422bb5e4efbeed2dcc93e03d 589 Pfam PF13899 Thioredoxin-like 478 549 1.9E-12 T 12-10-2018 PA257_3096 6a037217422bb5e4efbeed2dcc93e03d 589 Gene3D G3DSA:3.40.30.10 460 587 2.5E-25 T 12-10-2018 PA257_3096 6a037217422bb5e4efbeed2dcc93e03d 589 ProSitePatterns PS00194 Thioredoxin family active site. 494 512 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PA257_2306 11a5105bd99235a39c3b9b6596367233 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 255 5.4E-93 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 PA257_2306 11a5105bd99235a39c3b9b6596367233 261 SMART SM00900 146 247 4.5E-31 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 PA257_2306 11a5105bd99235a39c3b9b6596367233 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 5 259 35.444 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 PA257_2306 11a5105bd99235a39c3b9b6596367233 261 PIRSF PIRSF009437 1 261 5.4E-105 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 PA257_2306 11a5105bd99235a39c3b9b6596367233 261 Pfam PF04205 FMN-binding domain 146 244 4.7E-13 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 PA257_5525 680d3a3350561666f2b8fab07f47493d 326 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 47 316 1.0E-113 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PA257_5525 680d3a3350561666f2b8fab07f47493d 326 SMART SM00116 212 260 3.0 T 12-10-2018 IPR000644 CBS domain PA257_5525 680d3a3350561666f2b8fab07f47493d 326 SMART SM00116 277 325 0.02 T 12-10-2018 IPR000644 CBS domain PA257_5525 680d3a3350561666f2b8fab07f47493d 326 SUPERFAMILY SSF53697 11 324 1.67E-69 T 12-10-2018 PA257_5525 680d3a3350561666f2b8fab07f47493d 326 Pfam PF00571 CBS domain 279 323 6.1E-7 T 12-10-2018 IPR000644 CBS domain PA257_5525 680d3a3350561666f2b8fab07f47493d 326 Pfam PF00571 CBS domain 219 260 1.0E-4 T 12-10-2018 IPR000644 CBS domain PA257_5525 680d3a3350561666f2b8fab07f47493d 326 Gene3D G3DSA:3.40.50.10490 5 198 5.2E-64 T 12-10-2018 PA257_5525 680d3a3350561666f2b8fab07f47493d 326 Pfam PF01380 SIS domain 43 174 2.7E-32 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PA257_5525 680d3a3350561666f2b8fab07f47493d 326 PIRSF PIRSF004692 1 326 2.4E-133 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PA257_5525 680d3a3350561666f2b8fab07f47493d 326 Gene3D G3DSA:3.10.580.10 199 323 5.1E-44 T 12-10-2018 PA257_4160 552c46b815c3114e1f4d10973b3a4b3b 286 SUPERFAMILY SSF53474 5 285 3.51E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4160 552c46b815c3114e1f4d10973b3a4b3b 286 Gene3D G3DSA:3.40.50.1820 4 276 2.7E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4160 552c46b815c3114e1f4d10973b3a4b3b 286 Pfam PF00561 alpha/beta hydrolase fold 28 137 1.2E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_4160 552c46b815c3114e1f4d10973b3a4b3b 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 1.6E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_4160 552c46b815c3114e1f4d10973b3a4b3b 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.6E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_4160 552c46b815c3114e1f4d10973b3a4b3b 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 1.6E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_5452 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 25 46 2.9E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PA257_5452 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 3 18 2.9E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PA257_5452 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 60 72 2.9E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PA257_5452 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 82 95 2.9E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PA257_5452 5346c5c2f4ce088d6e5028068f1e4220 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 4.4E-32 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PA257_5452 5346c5c2f4ce088d6e5028068f1e4220 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 PA257_5452 5346c5c2f4ce088d6e5028068f1e4220 97 SUPERFAMILY SSF50129 1 96 5.56E-34 T 12-10-2018 IPR011032 GroES-like superfamily PA257_5452 5346c5c2f4ce088d6e5028068f1e4220 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 26.57 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PA257_5452 5346c5c2f4ce088d6e5028068f1e4220 97 SMART SM00883 2 95 9.5E-56 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PA257_5452 5346c5c2f4ce088d6e5028068f1e4220 97 Gene3D G3DSA:2.30.33.40 1 97 2.9E-36 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 PA257_0853 fe6b616d3fd6ca324a32be2c6f1e9388 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.137 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0853 fe6b616d3fd6ca324a32be2c6f1e9388 38 SUPERFAMILY SSF57840 1 38 2.75E-17 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0853 fe6b616d3fd6ca324a32be2c6f1e9388 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 12-10-2018 PA257_0853 fe6b616d3fd6ca324a32be2c6f1e9388 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0853 fe6b616d3fd6ca324a32be2c6f1e9388 38 Pfam PF00444 Ribosomal protein L36 1 38 6.1E-21 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0853 fe6b616d3fd6ca324a32be2c6f1e9388 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 6.0E-22 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6567 c7518912742a74abfcf950a04d7721ac 360 Gene3D G3DSA:3.30.1360.120 6 230 1.2E-81 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PA257_6567 c7518912742a74abfcf950a04d7721ac 360 SUPERFAMILY SSF103025 4 276 4.71E-88 T 12-10-2018 PA257_6567 c7518912742a74abfcf950a04d7721ac 360 PIRSF PIRSF006487 1 358 1.5E-80 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PA257_6567 c7518912742a74abfcf950a04d7721ac 360 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 261 349 1.1E-19 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PA257_6567 c7518912742a74abfcf950a04d7721ac 360 Gene3D G3DSA:4.10.1250.10 231 274 2.8E-25 T 12-10-2018 PA257_6567 c7518912742a74abfcf950a04d7721ac 360 Gene3D G3DSA:3.30.70.1400 51 137 1.2E-81 T 12-10-2018 PA257_6567 c7518912742a74abfcf950a04d7721ac 360 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 253 4.2E-83 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PA257_6567 c7518912742a74abfcf950a04d7721ac 360 Gene3D G3DSA:2.40.30.110 277 360 3.7E-31 T 12-10-2018 PA257_6567 c7518912742a74abfcf950a04d7721ac 360 SUPERFAMILY SSF101790 269 357 9.81E-26 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PA257_6567 c7518912742a74abfcf950a04d7721ac 360 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 355 43.731 T 12-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PA257_6567 c7518912742a74abfcf950a04d7721ac 360 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 354 5.8E-126 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PA257_2985 46f8cd1168beb24a6cbde0865df97e54 186 SUPERFAMILY SSF55729 10 179 5.57E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_2985 46f8cd1168beb24a6cbde0865df97e54 186 Gene3D G3DSA:3.40.630.30 1 186 8.2E-61 T 12-10-2018 PA257_2985 46f8cd1168beb24a6cbde0865df97e54 186 Pfam PF00583 Acetyltransferase (GNAT) family 35 149 5.3E-17 T 12-10-2018 IPR000182 GNAT domain PA257_3363 83f9de8d727bee19f5de388046148deb 322 Pfam PF12833 Helix-turn-helix domain 246 320 1.3E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3363 83f9de8d727bee19f5de388046148deb 322 Gene3D G3DSA:1.10.10.60 220 322 2.8E-23 T 12-10-2018 PA257_3363 83f9de8d727bee19f5de388046148deb 322 SMART SM00342 240 321 6.6E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3363 83f9de8d727bee19f5de388046148deb 322 SUPERFAMILY SSF46689 226 274 8.06E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3363 83f9de8d727bee19f5de388046148deb 322 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_3363 83f9de8d727bee19f5de388046148deb 322 SUPERFAMILY SSF46689 276 321 2.2E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2363 d67793fa60df1e4ee2729520841b1973 350 SUPERFAMILY SSF52540 6 242 1.47E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2363 d67793fa60df1e4ee2729520841b1973 350 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 5 345 2.6E-174 T 12-10-2018 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 PA257_2363 d67793fa60df1e4ee2729520841b1973 350 SUPERFAMILY SSF90002 268 349 1.44E-19 T 12-10-2018 PA257_2363 d67793fa60df1e4ee2729520841b1973 350 SMART SM00833 258 349 5.5E-8 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PA257_2363 d67793fa60df1e4ee2729520841b1973 350 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 215 5.6E-59 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PA257_2363 d67793fa60df1e4ee2729520841b1973 350 Gene3D G3DSA:3.30.1220.10 234 348 7.8E-21 T 12-10-2018 IPR036627 CobW-like, C-terminal domain superfamily PA257_2363 d67793fa60df1e4ee2729520841b1973 350 Gene3D G3DSA:3.40.50.300 4 232 4.1E-60 T 12-10-2018 PA257_2363 d67793fa60df1e4ee2729520841b1973 350 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 270 349 2.3E-17 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PA257_1816 eb6c241d5544a13451176181e2b71428 496 SUPERFAMILY SSF52540 41 216 2.02E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1816 eb6c241d5544a13451176181e2b71428 496 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 491 8.8E-236 T 12-10-2018 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 PA257_1816 eb6c241d5544a13451176181e2b71428 496 SUPERFAMILY SSF52540 302 489 1.21E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1816 eb6c241d5544a13451176181e2b71428 496 Gene3D G3DSA:3.40.50.300 1 236 8.2E-84 T 12-10-2018 PA257_1816 eb6c241d5544a13451176181e2b71428 496 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 269 495 3.1E-99 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related PA257_1816 eb6c241d5544a13451176181e2b71428 496 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 234 1.5E-53 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related PA257_1816 eb6c241d5544a13451176181e2b71428 496 Gene3D G3DSA:3.40.50.300 237 495 5.9E-113 T 12-10-2018 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 SUPERFAMILY SSF48264 27 397 1.7E-91 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 PRINTS PR00359 B-class P450 signature 271 282 5.7E-51 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 PRINTS PR00359 B-class P450 signature 347 358 5.7E-51 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 PRINTS PR00359 B-class P450 signature 137 153 5.7E-51 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 PRINTS PR00359 B-class P450 signature 289 316 5.7E-51 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 PRINTS PR00359 B-class P450 signature 91 102 5.7E-51 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 PRINTS PR00359 B-class P450 signature 338 347 5.7E-51 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 PRINTS PR00359 B-class P450 signature 190 212 5.7E-51 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 PRINTS PR00359 B-class P450 signature 154 169 5.7E-51 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 PRINTS PR00359 B-class P450 signature 317 332 5.7E-51 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 Gene3D G3DSA:1.10.630.10 7 410 1.5E-124 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1945 ec972bf248b47205c578d4784c2f7496 418 Pfam PF00067 Cytochrome P450 267 368 1.1E-13 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_0856 71795eb63bdb23b8ba831912c0915bac 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 35.582 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PA257_0856 71795eb63bdb23b8ba831912c0915bac 206 Pfam PF01479 S4 domain 97 143 1.2E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0856 71795eb63bdb23b8ba831912c0915bac 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 7.5E-34 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 PA257_0856 71795eb63bdb23b8ba831912c0915bac 206 Gene3D G3DSA:1.10.1050.10 1 102 2.8E-45 T 12-10-2018 PA257_0856 71795eb63bdb23b8ba831912c0915bac 206 SMART SM00363 96 160 1.7E-19 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0856 71795eb63bdb23b8ba831912c0915bac 206 SUPERFAMILY SSF55174 3 206 4.97E-72 T 12-10-2018 PA257_0856 71795eb63bdb23b8ba831912c0915bac 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0856 71795eb63bdb23b8ba831912c0915bac 206 Gene3D G3DSA:3.10.290.10 103 191 1.0E-32 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PA257_0856 71795eb63bdb23b8ba831912c0915bac 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.1E-80 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PA257_0856 71795eb63bdb23b8ba831912c0915bac 206 SMART SM01390 3 95 3.3E-52 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 PA257_6366 4db2d126b982d1d33df12921cde75035 244 Pfam PF00005 ABC transporter 22 169 8.4E-38 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6366 4db2d126b982d1d33df12921cde75035 244 PIRSF PIRSF039085 1 244 7.3E-106 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PA257_6366 4db2d126b982d1d33df12921cde75035 244 Gene3D G3DSA:3.40.50.300 1 244 2.7E-82 T 12-10-2018 PA257_6366 4db2d126b982d1d33df12921cde75035 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6366 4db2d126b982d1d33df12921cde75035 244 SMART SM00382 30 217 2.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6366 4db2d126b982d1d33df12921cde75035 244 SUPERFAMILY SSF52540 1 239 1.06E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0240 031b0de2ef43357752417757e290349c 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 305 3.2E-20 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain PA257_0240 031b0de2ef43357752417757e290349c 310 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 303 1.7E-111 T 12-10-2018 IPR017554 Malonate decarboxylase, McdH subunit PA257_0240 031b0de2ef43357752417757e290349c 310 Pfam PF00698 Acyl transferase domain 5 271 2.1E-28 T 12-10-2018 IPR014043 Acyl transferase PA257_0240 031b0de2ef43357752417757e290349c 310 SUPERFAMILY SSF52151 3 283 8.2E-50 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PA257_0240 031b0de2ef43357752417757e290349c 310 PIRSF PIRSF000446 1 301 1.4E-54 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PA257_0240 031b0de2ef43357752417757e290349c 310 SUPERFAMILY SSF55048 122 191 1.7E-10 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PA257_0240 031b0de2ef43357752417757e290349c 310 Gene3D G3DSA:3.30.70.250 119 191 9.9E-69 T 12-10-2018 PA257_0240 031b0de2ef43357752417757e290349c 310 Gene3D G3DSA:3.40.366.10 5 278 9.9E-69 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 PA257_2672 391d2b014a1181bc977ccd04845ad314 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 8.9E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_2672 391d2b014a1181bc977ccd04845ad314 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 8.9E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_2672 391d2b014a1181bc977ccd04845ad314 239 SMART SM00866 90 229 1.3E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_2672 391d2b014a1181bc977ccd04845ad314 239 Pfam PF07702 UTRA domain 90 227 4.9E-36 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_2672 391d2b014a1181bc977ccd04845ad314 239 Gene3D G3DSA:3.40.1410.10 74 233 1.6E-37 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_2672 391d2b014a1181bc977ccd04845ad314 239 SUPERFAMILY SSF64288 57 232 1.43E-44 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_2672 391d2b014a1181bc977ccd04845ad314 239 SMART SM00345 12 69 1.8E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_2672 391d2b014a1181bc977ccd04845ad314 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 3.1E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_2672 391d2b014a1181bc977ccd04845ad314 239 SUPERFAMILY SSF46785 5 73 5.54E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2672 391d2b014a1181bc977ccd04845ad314 239 Gene3D G3DSA:1.10.10.10 8 73 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6238 b2fbaa99d1355cc12b67cc5b78d7650d 503 Pfam PF08668 HDOD domain 17 200 3.7E-13 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD PA257_6238 b2fbaa99d1355cc12b67cc5b78d7650d 503 SUPERFAMILY SSF109604 13 246 1.44E-18 T 12-10-2018 PA257_6238 b2fbaa99d1355cc12b67cc5b78d7650d 503 Gene3D G3DSA:1.10.3210.10 13 253 2.9E-18 T 12-10-2018 PA257_1231 b1834084086798e07f260c52a5e7056e 393 SUPERFAMILY SSF103473 7 387 6.15E-50 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1231 b1834084086798e07f260c52a5e7056e 393 Gene3D G3DSA:1.20.1250.20 5 189 1.1E-27 T 12-10-2018 PA257_1231 b1834084086798e07f260c52a5e7056e 393 Pfam PF07690 Major Facilitator Superfamily 21 234 4.4E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1231 b1834084086798e07f260c52a5e7056e 393 Gene3D G3DSA:1.20.1250.20 201 388 3.7E-14 T 12-10-2018 PA257_2398 842a7c42cf13a7bcabe47e507f284941 257 SUPERFAMILY SSF52540 11 228 3.48E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2398 842a7c42cf13a7bcabe47e507f284941 257 Pfam PF00005 ABC transporter 20 169 2.6E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_2398 842a7c42cf13a7bcabe47e507f284941 257 Gene3D G3DSA:3.40.50.300 10 249 2.1E-67 T 12-10-2018 PA257_2398 842a7c42cf13a7bcabe47e507f284941 257 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2398 842a7c42cf13a7bcabe47e507f284941 257 SMART SM00382 29 213 1.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3696 3deefc223ecd179d97ce46f003f9ed8d 458 SMART SM01230 120 376 1.2E-93 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_3696 3deefc223ecd179d97ce46f003f9ed8d 458 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PA257_3696 3deefc223ecd179d97ce46f003f9ed8d 458 Gene3D G3DSA:3.30.590.10 123 458 1.2E-101 T 12-10-2018 PA257_3696 3deefc223ecd179d97ce46f003f9ed8d 458 SUPERFAMILY SSF55931 122 456 1.18E-99 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_3696 3deefc223ecd179d97ce46f003f9ed8d 458 Pfam PF00120 Glutamine synthetase, catalytic domain 121 454 4.5E-107 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_3696 3deefc223ecd179d97ce46f003f9ed8d 458 Gene3D G3DSA:3.10.20.70 15 122 5.4E-8 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_3696 3deefc223ecd179d97ce46f003f9ed8d 458 SUPERFAMILY SSF54368 17 119 3.14E-17 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_1522 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 SUPERFAMILY SSF46689 32 103 1.44E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1522 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 83 2.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1522 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 Gene3D G3DSA:1.10.357.10 35 237 3.1E-85 T 12-10-2018 PA257_4855 bafcc434a653c1eaa03b933cbe30480b 314 Gene3D G3DSA:3.60.15.10 16 312 2.6E-69 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_4855 bafcc434a653c1eaa03b933cbe30480b 314 SUPERFAMILY SSF56281 63 301 5.24E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_4855 bafcc434a653c1eaa03b933cbe30480b 314 SMART SM00849 77 292 1.7E-19 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_4855 bafcc434a653c1eaa03b933cbe30480b 314 Pfam PF00753 Metallo-beta-lactamase superfamily 75 292 5.6E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_0568 72eec6f2502c7e6c24b1846641315528 469 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 149 1.9E-70 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 Gene3D G3DSA:3.40.50.720 206 379 4.0E-71 T 12-10-2018 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 221 237 - T 12-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 12-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 SUPERFAMILY SSF51735 199 381 1.74E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0568 72eec6f2502c7e6c24b1846641315528 469 PIRSF PIRSF001109 2 469 5.9E-184 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 461 4.4E-153 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 SMART SM00997 199 381 6.6E-82 T 12-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 199 381 2.0E-56 T 12-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 SUPERFAMILY SSF52283 10 469 8.5E-108 T 12-10-2018 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 Gene3D G3DSA:3.40.50.1480 10 205 2.9E-91 T 12-10-2018 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 SMART SM00996 12 468 1.3E-276 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 461 43.804 T 12-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 PA257_0568 72eec6f2502c7e6c24b1846641315528 469 Gene3D G3DSA:3.40.50.1480 380 469 4.3E-33 T 12-10-2018 PA257_6594 2d836068f7e47d29b41c894e372dff5a 108 Gene3D G3DSA:3.40.30.10 1 108 7.0E-36 T 12-10-2018 PA257_6594 2d836068f7e47d29b41c894e372dff5a 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PA257_6594 2d836068f7e47d29b41c894e372dff5a 108 PIRSF PIRSF000077 2 108 3.4E-46 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PA257_6594 2d836068f7e47d29b41c894e372dff5a 108 Pfam PF00085 Thioredoxin 5 106 4.6E-35 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 PA257_6594 2d836068f7e47d29b41c894e372dff5a 108 PRINTS PR00421 Thioredoxin family signature 72 83 6.2E-10 T 12-10-2018 PA257_6594 2d836068f7e47d29b41c894e372dff5a 108 PRINTS PR00421 Thioredoxin family signature 32 41 6.2E-10 T 12-10-2018 PA257_6594 2d836068f7e47d29b41c894e372dff5a 108 PRINTS PR00421 Thioredoxin family signature 24 32 6.2E-10 T 12-10-2018 PA257_6594 2d836068f7e47d29b41c894e372dff5a 108 SUPERFAMILY SSF52833 3 106 4.89E-40 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_6594 2d836068f7e47d29b41c894e372dff5a 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.4E-39 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PA257_3295 0716b626e00a1057b2dbeea23d5f50bb 264 SUPERFAMILY SSF53850 26 263 1.36E-64 T 12-10-2018 PA257_3295 0716b626e00a1057b2dbeea23d5f50bb 264 Gene3D G3DSA:3.40.190.10 27 244 5.8E-66 T 12-10-2018 PA257_3295 0716b626e00a1057b2dbeea23d5f50bb 264 Pfam PF03180 NLPA lipoprotein 26 263 1.3E-74 T 12-10-2018 IPR004872 Lipoprotein NlpA family PA257_3295 0716b626e00a1057b2dbeea23d5f50bb 264 Gene3D G3DSA:3.40.190.10 105 210 5.8E-66 T 12-10-2018 PA257_0166 774463b9ec56281fe41e0d4e10a47092 449 SUPERFAMILY SSF51338 4 446 2.25E-20 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_0166 774463b9ec56281fe41e0d4e10a47092 449 Pfam PF01979 Amidohydrolase family 55 418 3.0E-59 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_0166 774463b9ec56281fe41e0d4e10a47092 449 SUPERFAMILY SSF51556 58 372 7.26E-99 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_0166 774463b9ec56281fe41e0d4e10a47092 449 Gene3D G3DSA:3.20.20.140 59 373 1.3E-127 T 12-10-2018 PA257_0166 774463b9ec56281fe41e0d4e10a47092 449 Gene3D G3DSA:2.30.40.10 22 420 1.3E-127 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_3753 48b8fe5caa9e0835e5404ce029dfa0ea 304 Pfam PF12706 Beta-lactamase superfamily domain 50 271 1.1E-48 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_3753 48b8fe5caa9e0835e5404ce029dfa0ea 304 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 304 177.541 T 12-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B PA257_3753 48b8fe5caa9e0835e5404ce029dfa0ea 304 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 304 3.7E-146 T 12-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B PA257_3753 48b8fe5caa9e0835e5404ce029dfa0ea 304 Gene3D G3DSA:3.60.15.10 1 304 2.1E-92 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_3753 48b8fe5caa9e0835e5404ce029dfa0ea 304 SUPERFAMILY SSF56281 1 304 1.36E-67 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_4986 1704860e42ff8ad93c54e7eb46d47a25 319 SUPERFAMILY SSF50129 1 134 3.8E-33 T 12-10-2018 IPR011032 GroES-like superfamily PA257_4986 1704860e42ff8ad93c54e7eb46d47a25 319 SMART SM00829 10 317 2.5E-13 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_4986 1704860e42ff8ad93c54e7eb46d47a25 319 Pfam PF00107 Zinc-binding dehydrogenase 151 261 9.3E-14 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_4986 1704860e42ff8ad93c54e7eb46d47a25 319 SUPERFAMILY SSF51735 113 286 1.31E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4986 1704860e42ff8ad93c54e7eb46d47a25 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 71 8.1E-5 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_4986 1704860e42ff8ad93c54e7eb46d47a25 319 Gene3D G3DSA:3.40.50.720 121 287 1.3E-57 T 12-10-2018 PA257_4986 1704860e42ff8ad93c54e7eb46d47a25 319 Gene3D G3DSA:3.90.180.10 8 310 1.3E-57 T 12-10-2018 PA257_4287 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 Gene3D G3DSA:3.40.50.2300 1 40 4.8E-7 T 12-10-2018 PA257_4287 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 Gene3D G3DSA:3.40.50.2300 41 102 2.8E-5 T 12-10-2018 PA257_4287 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 SUPERFAMILY SSF52788 1 107 2.49E-19 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily PA257_4287 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 PIRSF PIRSF029416 1 109 1.7E-51 T 12-10-2018 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 PA257_6579 4ef7f8687759cdb74cd5394ee2b986fc 104 Pfam PF05164 Cell division protein ZapA 8 90 3.5E-23 T 12-10-2018 IPR007838 Cell division protein ZapA-like PA257_6579 4ef7f8687759cdb74cd5394ee2b986fc 104 Gene3D G3DSA:1.20.5.50 49 104 6.6E-33 T 12-10-2018 PA257_6579 4ef7f8687759cdb74cd5394ee2b986fc 104 SUPERFAMILY SSF102829 7 96 3.14E-25 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily PA257_6579 4ef7f8687759cdb74cd5394ee2b986fc 104 Gene3D G3DSA:1.10.20.30 1 48 2.5E-26 T 12-10-2018 PA257_4093 840f5fa5c384e1f8ce5f1827acfeda8b 383 Pfam PF12832 MFS_1 like family 7 361 3.2E-85 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain PA257_4093 840f5fa5c384e1f8ce5f1827acfeda8b 383 Gene3D G3DSA:1.20.1250.20 194 382 4.3E-41 T 12-10-2018 PA257_4093 840f5fa5c384e1f8ce5f1827acfeda8b 383 SUPERFAMILY SSF103473 7 379 1.57E-50 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4093 840f5fa5c384e1f8ce5f1827acfeda8b 383 PIRSF PIRSF004925 2 382 8.3E-108 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter PA257_4093 840f5fa5c384e1f8ce5f1827acfeda8b 383 Gene3D G3DSA:1.20.1250.20 4 188 1.7E-23 T 12-10-2018 PA257_3488 803f1393f874ad34427062bd0df9aaeb 474 Pfam PF07044 Protein of unknown function (DUF1329) 97 469 6.2E-120 T 12-10-2018 IPR010752 Protein of unknown function DUF1329 PA257_5839 a177c0593521600a7bb5c003c40bd6d1 315 SMART SM00972 257 312 6.3E-14 T 12-10-2018 IPR007893 Spore coat protein U PA257_5839 a177c0593521600a7bb5c003c40bd6d1 315 SMART SM00972 97 162 5.0E-16 T 12-10-2018 IPR007893 Spore coat protein U PA257_5839 a177c0593521600a7bb5c003c40bd6d1 315 Pfam PF05229 Spore Coat Protein U domain 185 311 5.8E-31 T 12-10-2018 IPR007893 Spore coat protein U PA257_5839 a177c0593521600a7bb5c003c40bd6d1 315 Pfam PF05229 Spore Coat Protein U domain 14 160 9.9E-25 T 12-10-2018 IPR007893 Spore coat protein U PA257_3324 43e58dd9ab497a864334d0424d126854 432 Pfam PF01266 FAD dependent oxidoreductase 30 384 4.7E-38 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_3324 43e58dd9ab497a864334d0424d126854 432 Gene3D G3DSA:3.50.50.60 30 384 5.8E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3324 43e58dd9ab497a864334d0424d126854 432 SUPERFAMILY SSF51905 29 399 7.12E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3324 43e58dd9ab497a864334d0424d126854 432 Gene3D G3DSA:3.30.9.10 124 345 5.8E-55 T 12-10-2018 PA257_3324 43e58dd9ab497a864334d0424d126854 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 30 52 6.5E-6 T 12-10-2018 PA257_3324 43e58dd9ab497a864334d0424d126854 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 6.5E-6 T 12-10-2018 PA257_6126 99cf1fc70d57dd23c3db1adc7cb0956d 294 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 285 3.9E-92 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PA257_6126 99cf1fc70d57dd23c3db1adc7cb0956d 294 SUPERFAMILY SSF53335 63 280 1.18E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6126 99cf1fc70d57dd23c3db1adc7cb0956d 294 PIRSF PIRSF000401 1 293 8.2E-91 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PA257_6126 99cf1fc70d57dd23c3db1adc7cb0956d 294 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 1.3E-100 T 12-10-2018 PA257_6126 99cf1fc70d57dd23c3db1adc7cb0956d 294 Gene3D G3DSA:3.40.50.150 100 294 4.3E-59 T 12-10-2018 PA257_6126 99cf1fc70d57dd23c3db1adc7cb0956d 294 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 34.182 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 SMART SM00062 16 237 4.7E-27 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_0749 e64d64f064411e386a8784b9d66dc354 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 729 747 3.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 711 725 3.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 753 766 3.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 Gene3D G3DSA:3.30.565.10 640 767 7.8E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0749 e64d64f064411e386a8784b9d66dc354 772 Gene3D G3DSA:3.40.190.10 8 233 4.3E-45 T 12-10-2018 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 449 550 2.8E-10 T 12-10-2018 IPR000014 PAS domain PA257_0749 e64d64f064411e386a8784b9d66dc354 772 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 304 418 1.0E-15 T 12-10-2018 IPR000014 PAS domain PA257_0749 e64d64f064411e386a8784b9d66dc354 772 SUPERFAMILY SSF55874 646 767 4.94E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0749 e64d64f064411e386a8784b9d66dc354 772 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 677 768 8.3E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0749 e64d64f064411e386a8784b9d66dc354 772 SMART SM00091 298 364 8.2E-4 T 12-10-2018 IPR000014 PAS domain PA257_0749 e64d64f064411e386a8784b9d66dc354 772 SMART SM00091 423 496 0.3 T 12-10-2018 IPR000014 PAS domain PA257_0749 e64d64f064411e386a8784b9d66dc354 772 Pfam PF08447 PAS fold 451 535 1.4E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 SUPERFAMILY SSF53850 12 237 3.51E-36 T 12-10-2018 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 Gene3D G3DSA:3.30.450.20 303 425 1.7E-22 T 12-10-2018 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 SMART SM00086 502 543 13.0 T 12-10-2018 IPR001610 PAC motif PA257_0749 e64d64f064411e386a8784b9d66dc354 772 SMART SM00086 371 411 2.5E-4 T 12-10-2018 IPR001610 PAC motif PA257_0749 e64d64f064411e386a8784b9d66dc354 772 SMART SM00387 675 769 4.1E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0749 e64d64f064411e386a8784b9d66dc354 772 SUPERFAMILY SSF55785 408 541 4.35E-20 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0749 e64d64f064411e386a8784b9d66dc354 772 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 17 235 8.9E-27 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_0749 e64d64f064411e386a8784b9d66dc354 772 SUPERFAMILY SSF55785 310 420 4.03E-23 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0749 e64d64f064411e386a8784b9d66dc354 772 Gene3D G3DSA:3.30.450.20 426 541 3.2E-19 T 12-10-2018 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 Pfam PF08448 PAS fold 305 413 5.0E-11 T 12-10-2018 IPR013656 PAS fold-4 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 Gene3D G3DSA:3.40.190.10 101 196 4.3E-45 T 12-10-2018 PA257_0749 e64d64f064411e386a8784b9d66dc354 772 Pfam PF07730 Histidine kinase 571 637 5.4E-14 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PA257_2920 6fa0a7f1a5122be10c1e103912e5d8ac 672 Pfam PF05787 Bacterial protein of unknown function (DUF839) 85 636 8.7E-196 T 12-10-2018 IPR008557 Protein of unknown function DUF839 PA257_2920 6fa0a7f1a5122be10c1e103912e5d8ac 672 SUPERFAMILY SSF63829 345 636 3.17E-13 T 12-10-2018 PA257_4286 068dd351e5fba7325c092b7b59992fd2 455 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 349 369 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PA257_4286 068dd351e5fba7325c092b7b59992fd2 455 Pfam PF00860 Permease family 22 400 1.2E-99 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PA257_4286 068dd351e5fba7325c092b7b59992fd2 455 TIGRFAM TIGR03173 pbuX: xanthine permease 26 434 3.8E-160 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 PA257_4286 068dd351e5fba7325c092b7b59992fd2 455 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 432 4.6E-113 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PA257_6927 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SUPERFAMILY SSF48008 74 210 1.31E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_6927 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.5E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6927 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SMART SM00345 9 67 2.5E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6927 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Gene3D G3DSA:1.10.10.10 2 68 5.8E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6927 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SUPERFAMILY SSF46785 4 71 5.82E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6927 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Gene3D G3DSA:1.20.120.530 71 202 6.9E-32 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_6927 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Pfam PF07729 FCD domain 77 198 1.2E-26 T 12-10-2018 IPR011711 GntR, C-terminal PA257_6927 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SMART SM00895 77 201 5.6E-23 T 12-10-2018 IPR011711 GntR, C-terminal PA257_2299 ae4a6f095aa5cd74db630046e2ebf75d 245 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 50 90 - T 12-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 PA257_2299 ae4a6f095aa5cd74db630046e2ebf75d 245 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 243 2.3E-97 T 12-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 PA257_2299 ae4a6f095aa5cd74db630046e2ebf75d 245 Gene3D G3DSA:3.40.50.1580 1 245 1.2E-82 T 12-10-2018 PA257_2299 ae4a6f095aa5cd74db630046e2ebf75d 245 Pfam PF01048 Phosphorylase superfamily 4 243 1.4E-42 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PA257_2299 ae4a6f095aa5cd74db630046e2ebf75d 245 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 245 34.098 T 12-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 PA257_2299 ae4a6f095aa5cd74db630046e2ebf75d 245 SUPERFAMILY SSF53167 4 243 4.03E-78 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 PA257_3253 c016b283568ffb7b9f8e820e54ff2547 159 Pfam PF04542 Sigma-70 region 2 2 65 1.2E-9 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3253 c016b283568ffb7b9f8e820e54ff2547 159 Pfam PF08281 Sigma-70, region 4 98 149 2.3E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_3253 c016b283568ffb7b9f8e820e54ff2547 159 SUPERFAMILY SSF88946 2 83 3.18E-13 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3253 c016b283568ffb7b9f8e820e54ff2547 159 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 152 1.5E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_3253 c016b283568ffb7b9f8e820e54ff2547 159 SUPERFAMILY SSF88659 67 155 8.07E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_3253 c016b283568ffb7b9f8e820e54ff2547 159 Gene3D G3DSA:1.10.1740.10 1 68 5.3E-8 T 12-10-2018 PA257_3253 c016b283568ffb7b9f8e820e54ff2547 159 Gene3D G3DSA:1.10.10.10 70 155 2.3E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6610 7da47b12cb80b20247db92fd0dfa8cad 146 PIRSF PIRSF016548 1 141 7.9E-59 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 PA257_6610 7da47b12cb80b20247db92fd0dfa8cad 146 Gene3D G3DSA:1.20.120.1370 1 139 1.5E-40 T 12-10-2018 IPR038309 Rsd/AlgQ superfamily PA257_6610 7da47b12cb80b20247db92fd0dfa8cad 146 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 131 2.2E-45 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 PA257_4014 45116eec55c37da446d585b462f58777 856 SUPERFAMILY SSF52540 3 187 3.59E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4014 45116eec55c37da446d585b462f58777 856 SMART SM00421 793 850 5.9E-27 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4014 45116eec55c37da446d585b462f58777 856 ProSitePatterns PS00622 LuxR-type HTH domain signature. 810 837 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4014 45116eec55c37da446d585b462f58777 856 Gene3D G3DSA:3.40.50.300 3 136 9.5E-6 T 12-10-2018 PA257_4014 45116eec55c37da446d585b462f58777 856 Gene3D G3DSA:1.25.40.10 417 774 2.5E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4014 45116eec55c37da446d585b462f58777 856 Pfam PF00196 Bacterial regulatory proteins, luxR family 796 850 3.5E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4014 45116eec55c37da446d585b462f58777 856 Gene3D G3DSA:1.10.10.10 786 856 6.9E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4014 45116eec55c37da446d585b462f58777 856 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 810 826 4.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4014 45116eec55c37da446d585b462f58777 856 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 826 838 4.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4014 45116eec55c37da446d585b462f58777 856 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 796 810 4.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4014 45116eec55c37da446d585b462f58777 856 SUPERFAMILY SSF46894 789 855 7.48E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 5 269 2.2E-110 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 Gene3D G3DSA:3.40.50.620 80 217 1.2E-107 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 5 289 44.171 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 SUPERFAMILY SSF52374 5 284 6.7E-88 T 12-10-2018 PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 Gene3D G3DSA:3.40.50.620 5 283 1.2E-107 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 123 230 2.5E-16 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 8 108 7.4E-30 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 6.5E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 169 179 6.5E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 193 6.5E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 6.5E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_5937 886980b4d7f0476a740c73b72cb21f24 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 6.5E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_6303 b31f4f9382a9b78dd6e5385167848beb 896 Gene3D G3DSA:3.40.50.970 65 478 7.7E-131 T 12-10-2018 PA257_6303 b31f4f9382a9b78dd6e5385167848beb 896 Gene3D G3DSA:3.40.50.920 713 895 5.2E-79 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_6303 b31f4f9382a9b78dd6e5385167848beb 896 SUPERFAMILY SSF52518 480 707 3.04E-97 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_6303 b31f4f9382a9b78dd6e5385167848beb 896 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 137 301 4.4E-8 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PA257_6303 b31f4f9382a9b78dd6e5385167848beb 896 Gene3D G3DSA:3.40.50.970 479 712 1.3E-111 T 12-10-2018 PA257_6303 b31f4f9382a9b78dd6e5385167848beb 896 SUPERFAMILY SSF52518 66 474 1.04E-139 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_6303 b31f4f9382a9b78dd6e5385167848beb 896 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 15 894 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PA257_6303 b31f4f9382a9b78dd6e5385167848beb 896 SUPERFAMILY SSF52922 708 894 1.2E-63 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_6303 b31f4f9382a9b78dd6e5385167848beb 896 PIRSF PIRSF000156 7 896 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PA257_6071 e5536a46bc9d43a295388672cb06e7ce 266 SUPERFAMILY SSF53335 54 249 3.59E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6071 e5536a46bc9d43a295388672cb06e7ce 266 Pfam PF08241 Methyltransferase domain 63 160 6.6E-15 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PA257_6071 e5536a46bc9d43a295388672cb06e7ce 266 Gene3D G3DSA:3.40.50.150 48 249 4.1E-29 T 12-10-2018 PA257_3512 6ead67d1247f7ba8411534a8541e773a 527 SUPERFAMILY SSF53720 22 518 1.83E-100 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_3512 6ead67d1247f7ba8411534a8541e773a 527 Gene3D G3DSA:3.40.309.10 267 454 6.8E-199 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_3512 6ead67d1247f7ba8411534a8541e773a 527 Gene3D G3DSA:3.40.605.10 44 519 6.8E-199 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_3512 6ead67d1247f7ba8411534a8541e773a 527 Pfam PF00171 Aldehyde dehydrogenase family 35 456 5.5E-46 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_1248 ff0c0dd8733dabaeeccccc15c078dafd 185 PIRSF PIRSF006443 1 167 1.8E-59 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 PA257_1248 ff0c0dd8733dabaeeccccc15c078dafd 185 SUPERFAMILY SSF53218 8 169 2.75E-45 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily PA257_1248 ff0c0dd8733dabaeeccccc15c078dafd 185 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 1.1E-32 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_1248 ff0c0dd8733dabaeeccccc15c078dafd 185 SMART SM00852 15 159 1.2E-28 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_1248 ff0c0dd8733dabaeeccccc15c078dafd 185 Pfam PF00994 Probable molybdopterin binding domain 15 156 1.7E-31 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_1248 ff0c0dd8733dabaeeccccc15c078dafd 185 Gene3D G3DSA:3.40.980.10 3 173 8.5E-48 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily PA257_1248 ff0c0dd8733dabaeeccccc15c078dafd 185 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 170 7.1E-84 T 12-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 PA257_6170 d8c23bf70c5b3958bbc6a9bd706075af 223 Pfam PF01730 UreF 35 181 4.0E-35 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PA257_6170 d8c23bf70c5b3958bbc6a9bd706075af 223 PIRSF PIRSF009467 1 223 3.4E-57 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PA257_6170 d8c23bf70c5b3958bbc6a9bd706075af 223 Hamap MF_01385 Urease accessory protein UreF [ureF]. 3 223 29.094 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PA257_6170 d8c23bf70c5b3958bbc6a9bd706075af 223 Gene3D G3DSA:1.10.4190.10 1 200 1.2E-49 T 12-10-2018 IPR038277 UreF domain superfamily PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 15 103 5.9E-31 T 12-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 Gene3D G3DSA:2.40.50.100 174 241 1.1E-32 T 12-10-2018 PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 Pfam PF03459 TOBE domain 115 177 3.0E-16 T 12-10-2018 IPR005116 Transport-associated OB, type 1 PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 Pfam PF03459 TOBE domain 186 247 3.0E-13 T 12-10-2018 IPR005116 Transport-associated OB, type 1 PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 113 179 4.6E-16 T 12-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 SUPERFAMILY SSF50331 161 248 2.34E-10 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 PIRSF PIRSF005763 2 252 1.7E-83 T 12-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 79 2.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 SUPERFAMILY SSF50331 113 181 1.65E-16 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 Gene3D G3DSA:1.10.10.10 4 103 7.2E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 SUPERFAMILY SSF46785 11 99 2.21E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0627 e4a8047fcca03d60c14f27bc6ee34b30 252 Gene3D G3DSA:2.40.50.100 114 248 1.1E-32 T 12-10-2018 PA257_1736 3c5fa5e7faad31e0fcfb4e9208878ee2 367 Gene3D G3DSA:1.50.10.100 28 362 3.5E-120 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 PA257_1736 3c5fa5e7faad31e0fcfb4e9208878ee2 367 Pfam PF05426 Alginate lyase 63 303 7.2E-59 T 12-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 PA257_1736 3c5fa5e7faad31e0fcfb4e9208878ee2 367 Hamap MF_00557 Alginate lyase [algL]. 5 367 55.74 T 12-10-2018 IPR022859 Alginate lyase GO:0042122|GO:0042597|GO:0045135 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 PA257_1736 3c5fa5e7faad31e0fcfb4e9208878ee2 367 SUPERFAMILY SSF48230 30 361 1.46E-62 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 Gene3D G3DSA:1.25.40.10 431 789 6.5E-44 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 844 856 1.0E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 814 828 1.0E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 828 844 1.0E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 SUPERFAMILY SSF48452 435 779 6.37E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 ProSitePatterns PS00622 LuxR-type HTH domain signature. 828 855 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 SUPERFAMILY SSF48452 441 553 2.02E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 Pfam PF00196 Bacterial regulatory proteins, luxR family 813 867 9.5E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 Gene3D G3DSA:1.10.10.10 801 875 1.9E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 Gene3D G3DSA:3.40.50.300 1 158 5.5E-9 T 12-10-2018 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 SMART SM00421 811 868 4.5E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 SUPERFAMILY SSF52540 5 216 5.61E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1238 0c8b700de1f7dbbc372073e3945e8a8b 875 SUPERFAMILY SSF46894 803 874 3.4E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_2998 f843a7887520d03d8a985345f0cae571 587 Pfam PF00990 Diguanylate cyclase, GGDEF domain 167 293 3.0E-5 T 12-10-2018 IPR000160 GGDEF domain PA257_2998 f843a7887520d03d8a985345f0cae571 587 Pfam PF01590 GAF domain 28 157 3.5E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_2998 f843a7887520d03d8a985345f0cae571 587 SUPERFAMILY SSF55073 172 307 2.75E-8 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_2998 f843a7887520d03d8a985345f0cae571 587 Gene3D G3DSA:3.20.20.450 339 587 5.5E-88 T 12-10-2018 IPR035919 EAL domain superfamily PA257_2998 f843a7887520d03d8a985345f0cae571 587 SMART SM00065 26 169 0.0015 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_2998 f843a7887520d03d8a985345f0cae571 587 SUPERFAMILY SSF141868 349 586 2.35E-80 T 12-10-2018 IPR035919 EAL domain superfamily PA257_2998 f843a7887520d03d8a985345f0cae571 587 SUPERFAMILY SSF55781 28 164 6.28E-25 T 12-10-2018 PA257_2998 f843a7887520d03d8a985345f0cae571 587 Gene3D G3DSA:3.30.70.270 167 338 5.2E-66 T 12-10-2018 PA257_2998 f843a7887520d03d8a985345f0cae571 587 SMART SM00052 334 580 1.3E-96 T 12-10-2018 IPR001633 EAL domain PA257_2998 f843a7887520d03d8a985345f0cae571 587 Gene3D G3DSA:3.30.450.40 22 166 3.4E-18 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_2998 f843a7887520d03d8a985345f0cae571 587 SMART SM00267 152 324 0.0019 T 12-10-2018 IPR000160 GGDEF domain PA257_2998 f843a7887520d03d8a985345f0cae571 587 Pfam PF00563 EAL domain 341 575 1.1E-69 T 12-10-2018 IPR001633 EAL domain PA257_0170 7c45799d268c7142a5893c83d92379b2 172 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 4 145 1.3E-46 T 12-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 PA257_0170 7c45799d268c7142a5893c83d92379b2 172 SUPERFAMILY SSF52309 1 156 3.97E-43 T 12-10-2018 PA257_0170 7c45799d268c7142a5893c83d92379b2 172 Gene3D G3DSA:3.40.50.450 1 171 1.8E-50 T 12-10-2018 PA257_0248 d21cd284b2154b3d9e734774b1541343 460 Pfam PF00202 Aminotransferase class-III 38 447 5.7E-82 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0248 d21cd284b2154b3d9e734774b1541343 460 Gene3D G3DSA:3.90.1150.10 18 450 2.1E-166 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_0248 d21cd284b2154b3d9e734774b1541343 460 SUPERFAMILY SSF53383 18 447 3.52E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_0248 d21cd284b2154b3d9e734774b1541343 460 Gene3D G3DSA:3.40.640.10 72 346 2.1E-166 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_0248 d21cd284b2154b3d9e734774b1541343 460 PIRSF PIRSF000521 19 452 5.9E-23 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_6290 ec09bbe555b627ea3cfdad72fd3d72a8 472 SUPERFAMILY SSF102588 179 447 5.89E-33 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 PA257_6290 ec09bbe555b627ea3cfdad72fd3d72a8 472 Pfam PF02585 GlcNAc-PI de-N-acetylase 183 352 3.6E-13 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 PA257_6290 ec09bbe555b627ea3cfdad72fd3d72a8 472 Gene3D G3DSA:3.40.50.10320 174 459 7.2E-28 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 PA257_5799 2894c3414c983fcdd983177ab773ad82 374 Pfam PF05175 Methyltransferase small domain 201 371 6.2E-51 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PA257_5799 2894c3414c983fcdd983177ab773ad82 374 SUPERFAMILY SSF53335 199 356 5.58E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5799 2894c3414c983fcdd983177ab773ad82 374 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 45.622 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 PA257_5799 2894c3414c983fcdd983177ab773ad82 374 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_5799 2894c3414c983fcdd983177ab773ad82 374 Gene3D G3DSA:3.40.50.150 188 374 1.8E-45 T 12-10-2018 PA257_5799 2894c3414c983fcdd983177ab773ad82 374 SUPERFAMILY SSF53335 43 161 8.94E-5 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5799 2894c3414c983fcdd983177ab773ad82 374 Gene3D G3DSA:3.40.50.150 8 183 8.5E-55 T 12-10-2018 PA257_5799 2894c3414c983fcdd983177ab773ad82 374 PIRSF PIRSF037565 1 374 1.5E-142 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 PA257_5329 907442d4f7e5bdffb3b971a78616e682 227 Gene3D G3DSA:3.55.50.30 29 98 3.5E-20 T 12-10-2018 PA257_5329 907442d4f7e5bdffb3b971a78616e682 227 Pfam PF13103 TonB C terminal 125 187 3.7E-5 T 12-10-2018 PA257_5329 907442d4f7e5bdffb3b971a78616e682 227 SMART SM00965 52 103 1.1E-10 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_5329 907442d4f7e5bdffb3b971a78616e682 227 SUPERFAMILY SSF74653 115 199 2.75E-10 T 12-10-2018 PA257_5329 907442d4f7e5bdffb3b971a78616e682 227 Gene3D G3DSA:3.30.1150.10 99 208 7.3E-6 T 12-10-2018 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 PIRSF PIRSF038928 1 482 1.6E-221 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 321 347 2.4E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 124 142 2.4E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 289 316 2.4E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 84 102 2.4E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 21 44 2.4E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 105 122 2.4E-71 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 Pfam PF06628 Catalase-related immune-responsive 418 477 1.1E-20 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 Gene3D G3DSA:2.40.180.10 3 482 2.4E-236 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 SUPERFAMILY SSF56634 3 481 3.79E-211 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 SMART SM01060 8 393 2.5E-283 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_0859 07dd5d23b964a2d7151e58d18875ad23 482 Pfam PF00199 Catalase 8 390 5.7E-187 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_6000 354119ae61cd8ce77c3840c3d418c39b 297 SMART SM00090 2 234 5.3E-16 T 12-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 PA257_6000 354119ae61cd8ce77c3840c3d418c39b 297 Gene3D G3DSA:1.10.510.10 132 282 6.3E-18 T 12-10-2018 PA257_6000 354119ae61cd8ce77c3840c3d418c39b 297 SUPERFAMILY SSF56112 18 225 1.8E-22 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_6000 354119ae61cd8ce77c3840c3d418c39b 297 Gene3D G3DSA:3.30.200.20 16 126 7.4E-5 T 12-10-2018 PA257_6000 354119ae61cd8ce77c3840c3d418c39b 297 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 12-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 PA257_6000 354119ae61cd8ce77c3840c3d418c39b 297 Pfam PF01163 RIO1 family 31 222 1.2E-47 T 12-10-2018 PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 87 160 1.2E-24 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 SMART SM00912 51 165 6.7E-45 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 Pfam PF07581 The GLUG motif 1227 1252 1.8E-5 T 12-10-2018 IPR011493 GLUG PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 Pfam PF07581 The GLUG motif 1053 1078 1.9E-4 T 12-10-2018 IPR011493 GLUG PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 Pfam PF07581 The GLUG motif 1139 1165 0.0012 T 12-10-2018 IPR011493 GLUG PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 Gene3D G3DSA:2.160.20.10 54 384 1.2E-78 T 12-10-2018 IPR012334 Pectin lyase fold PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 Pfam PF05860 haemagglutination activity domain 54 164 4.7E-28 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 SUPERFAMILY SSF51126 45 339 1.07E-48 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 Gene3D G3DSA:2.160.20.110 1092 1217 2.6E-5 T 12-10-2018 PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 Gene3D G3DSA:2.160.20.110 791 1037 3.3E-15 T 12-10-2018 PA257_5615 b3931933ea0c9efd01e28a4879e41022 1435 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.3E-8 T 12-10-2018 IPR024973 ESPR domain PA257_5419 7f75af223a6b8a1bc80ba226f649bd22 388 Pfam PF07690 Major Facilitator Superfamily 8 341 1.7E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_5419 7f75af223a6b8a1bc80ba226f649bd22 388 SUPERFAMILY SSF103473 5 375 4.71E-56 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_5419 7f75af223a6b8a1bc80ba226f649bd22 388 Gene3D G3DSA:1.20.1250.20 2 374 3.0E-47 T 12-10-2018 PA257_0910 b8e3668f796ed3a36c97681798e6f7fe 212 Pfam PF04299 Putative FMN-binding domain 1 168 3.9E-64 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type PA257_0910 b8e3668f796ed3a36c97681798e6f7fe 212 PIRSF PIRSF010372 1 212 7.1E-83 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type PA257_0910 b8e3668f796ed3a36c97681798e6f7fe 212 SUPERFAMILY SSF50475 9 192 1.3E-38 T 12-10-2018 PA257_0910 b8e3668f796ed3a36c97681798e6f7fe 212 Gene3D G3DSA:2.30.110.10 1 207 4.1E-66 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PA257_5460 26010b9c83e8c4b6dec104bc7f2c8c71 278 SUPERFAMILY SSF82861 25 107 1.57E-16 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PA257_5460 26010b9c83e8c4b6dec104bc7f2c8c71 278 Pfam PF00924 Mechanosensitive ion channel 67 262 1.5E-49 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PA257_5460 26010b9c83e8c4b6dec104bc7f2c8c71 278 SUPERFAMILY SSF82689 177 272 2.35E-26 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PA257_5460 26010b9c83e8c4b6dec104bc7f2c8c71 278 SUPERFAMILY SSF50182 109 174 5.89E-18 T 12-10-2018 IPR010920 LSM domain superfamily PA257_5460 26010b9c83e8c4b6dec104bc7f2c8c71 278 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 138 172 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 PA257_5460 26010b9c83e8c4b6dec104bc7f2c8c71 278 Gene3D G3DSA:3.30.70.100 175 266 1.5E-22 T 12-10-2018 PA257_5460 26010b9c83e8c4b6dec104bc7f2c8c71 278 Pfam PF05552 Conserved TM helix 15 59 7.2E-8 T 12-10-2018 IPR008910 Conserved TM helix PA257_5460 26010b9c83e8c4b6dec104bc7f2c8c71 278 Gene3D G3DSA:2.30.30.60 124 173 1.2E-21 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PA257_3736 9e8e84a8e648c203491a9960906977ef 256 Pfam PF00106 short chain dehydrogenase 6 195 1.7E-54 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3736 9e8e84a8e648c203491a9960906977ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3736 9e8e84a8e648c203491a9960906977ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3736 9e8e84a8e648c203491a9960906977ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3736 9e8e84a8e648c203491a9960906977ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3736 9e8e84a8e648c203491a9960906977ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3736 9e8e84a8e648c203491a9960906977ef 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3736 9e8e84a8e648c203491a9960906977ef 256 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 256 5.0E-101 T 12-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 PA257_3736 9e8e84a8e648c203491a9960906977ef 256 Gene3D G3DSA:3.40.50.720 2 256 6.0E-78 T 12-10-2018 PA257_3736 9e8e84a8e648c203491a9960906977ef 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.8E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3736 9e8e84a8e648c203491a9960906977ef 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.8E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3736 9e8e84a8e648c203491a9960906977ef 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.8E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3736 9e8e84a8e648c203491a9960906977ef 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_3736 9e8e84a8e648c203491a9960906977ef 256 SUPERFAMILY SSF51735 1 255 8.06E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6561 8396ded8f1a59e50899365cfa1821c9b 487 Pfam PF01928 CYTH domain 36 234 4.0E-38 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 PA257_6561 8396ded8f1a59e50899365cfa1821c9b 487 Gene3D G3DSA:2.40.320.10 34 236 4.0E-35 T 12-10-2018 PA257_6561 8396ded8f1a59e50899365cfa1821c9b 487 SMART SM01118 35 240 3.3E-33 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 PA257_6561 8396ded8f1a59e50899365cfa1821c9b 487 SUPERFAMILY SSF55154 34 244 2.29E-41 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 PA257_1809 0678df4490dc2a64903bf5d86c525e69 398 SUPERFAMILY SSF53187 13 348 1.37E-44 T 12-10-2018 PA257_1809 0678df4490dc2a64903bf5d86c525e69 398 Gene3D G3DSA:3.40.630.10 19 346 2.3E-83 T 12-10-2018 PA257_1809 0678df4490dc2a64903bf5d86c525e69 398 Gene3D G3DSA:2.40.30.40 81 175 2.3E-83 T 12-10-2018 IPR023367 Peptidase M42, domain 2 PA257_1809 0678df4490dc2a64903bf5d86c525e69 398 SUPERFAMILY SSF101821 78 190 1.1E-24 T 12-10-2018 PA257_1809 0678df4490dc2a64903bf5d86c525e69 398 Pfam PF05343 M42 glutamyl aminopeptidase 53 341 8.9E-74 T 12-10-2018 IPR008007 Peptidase M42 PA257_1809 0678df4490dc2a64903bf5d86c525e69 398 TIGRFAM TIGR03106 trio_M42_hydro: hydrolase, peptidase M42 family 8 349 1.8E-171 T 12-10-2018 IPR017537 Peptidase M42, hydrolase PA257_1477 f4d4becb78b8492e132fdd007a6696e9 116 PRINTS PR00061 Ribosomal protein L19 signature 89 114 6.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1477 f4d4becb78b8492e132fdd007a6696e9 116 PRINTS PR00061 Ribosomal protein L19 signature 35 64 6.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1477 f4d4becb78b8492e132fdd007a6696e9 116 PRINTS PR00061 Ribosomal protein L19 signature 5 34 6.6E-41 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1477 f4d4becb78b8492e132fdd007a6696e9 116 Pfam PF01245 Ribosomal protein L19 5 114 2.3E-49 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1477 f4d4becb78b8492e132fdd007a6696e9 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1477 f4d4becb78b8492e132fdd007a6696e9 116 Gene3D G3DSA:2.30.30.790 3 115 3.9E-15 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1477 f4d4becb78b8492e132fdd007a6696e9 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 29.92 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1477 f4d4becb78b8492e132fdd007a6696e9 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 114 3.7E-50 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1477 f4d4becb78b8492e132fdd007a6696e9 116 PIRSF PIRSF002191 1 116 6.9E-49 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1477 f4d4becb78b8492e132fdd007a6696e9 116 SUPERFAMILY SSF50104 2 114 2.61E-45 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily PA257_2963 494f82062eac0bd417707b01decb421b 319 Gene3D G3DSA:3.40.190.10 31 307 1.7E-100 T 12-10-2018 PA257_2963 494f82062eac0bd417707b01decb421b 319 SUPERFAMILY SSF53850 29 258 1.61E-46 T 12-10-2018 PA257_2963 494f82062eac0bd417707b01decb421b 319 SMART SM00062 30 248 8.2E-23 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2963 494f82062eac0bd417707b01decb421b 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 31 310 3.0E-63 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 PA257_2963 494f82062eac0bd417707b01decb421b 319 Gene3D G3DSA:1.10.8.450 243 276 1.7E-100 T 12-10-2018 PA257_2963 494f82062eac0bd417707b01decb421b 319 Gene3D G3DSA:3.40.190.10 112 211 1.7E-100 T 12-10-2018 PA257_2963 494f82062eac0bd417707b01decb421b 319 Pfam PF09084 NMT1/THI5 like 58 252 2.6E-15 T 12-10-2018 IPR015168 SsuA/THI5-like PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 PRINTS PR01035 Tetracycline resistance protein signature 354 377 9.9E-56 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 PRINTS PR01035 Tetracycline resistance protein signature 150 172 9.9E-56 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 PRINTS PR01035 Tetracycline resistance protein signature 120 141 9.9E-56 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 PRINTS PR01035 Tetracycline resistance protein signature 266 286 9.9E-56 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 PRINTS PR01035 Tetracycline resistance protein signature 31 47 9.9E-56 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 PRINTS PR01035 Tetracycline resistance protein signature 319 339 9.9E-56 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 PRINTS PR01035 Tetracycline resistance protein signature 93 117 9.9E-56 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 PRINTS PR01035 Tetracycline resistance protein signature 178 198 9.9E-56 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 PRINTS PR01035 Tetracycline resistance protein signature 294 315 9.9E-56 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 SUPERFAMILY SSF103473 19 416 1.57E-61 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 Pfam PF07690 Major Facilitator Superfamily 25 328 3.2E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4678 a669f7da2c46c35bda8db0d965a9f7c2 422 Gene3D G3DSA:1.20.1250.20 14 414 2.8E-66 T 12-10-2018 PA257_6271 677c7225ac8e708822bb18fb3bab1b23 215 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 89 200 1.3E-25 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal PA257_6271 677c7225ac8e708822bb18fb3bab1b23 215 SUPERFAMILY SSF46689 8 85 1.35E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6271 677c7225ac8e708822bb18fb3bab1b23 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 7.5E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_6271 677c7225ac8e708822bb18fb3bab1b23 215 Gene3D G3DSA:1.10.357.10 1 215 9.0E-95 T 12-10-2018 PA257_6271 677c7225ac8e708822bb18fb3bab1b23 215 SUPERFAMILY SSF48498 86 200 9.79E-19 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_4603 bb50db280a518f8a868ae1ddccfb1978 135 Gene3D G3DSA:3.30.300.20 3 135 5.1E-36 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_4603 bb50db280a518f8a868ae1ddccfb1978 135 SUPERFAMILY SSF82784 10 133 1.07E-35 T 12-10-2018 IPR036102 OsmC/Ohr superfamily PA257_4603 bb50db280a518f8a868ae1ddccfb1978 135 Pfam PF02566 OsmC-like protein 36 130 4.0E-20 T 12-10-2018 IPR003718 OsmC/Ohr family PA257_1117 52581fe4642175b318b933d2eeba4d48 229 Pfam PF00230 Major intrinsic protein 2 221 2.9E-46 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 Gene3D G3DSA:1.20.1080.10 1 228 3.9E-84 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 ProSitePatterns PS00221 MIP family signature. 60 68 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 SUPERFAMILY SSF81338 1 225 3.92E-66 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 35.146 T 12-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 165 187 9.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 79 98 9.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 42 66 9.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 2 21 9.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 135 153 9.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 204 224 9.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1117 52581fe4642175b318b933d2eeba4d48 229 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 1.4E-57 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_3228 34c910016801ae359358637fc4f4c359 72 SUPERFAMILY SSF160582 1 69 2.48E-30 T 12-10-2018 IPR038020 MbtH-like domain superfamily PA257_3228 34c910016801ae359358637fc4f4c359 72 SMART SM00923 3 53 6.0E-27 T 12-10-2018 IPR005153 MbtH-like domain PA257_3228 34c910016801ae359358637fc4f4c359 72 Pfam PF03621 MbtH-like protein 1 53 6.9E-25 T 12-10-2018 IPR005153 MbtH-like domain PA257_3228 34c910016801ae359358637fc4f4c359 72 Gene3D G3DSA:3.90.820.10 1 72 8.4E-37 T 12-10-2018 PA257_6599 da240b3e0c5d9583556f997737eb00e3 222 Gene3D G3DSA:3.40.50.880 1 222 8.6E-98 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_6599 da240b3e0c5d9583556f997737eb00e3 222 SUPERFAMILY SSF52317 3 217 1.36E-66 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_6599 da240b3e0c5d9583556f997737eb00e3 222 Pfam PF01965 DJ-1/PfpI family 16 190 2.5E-9 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_6599 da240b3e0c5d9583556f997737eb00e3 222 PIRSF PIRSF006320 2 217 2.2E-108 T 12-10-2018 IPR026041 Glyoxalase ElbB PA257_4092 c302df8c3b7d518f4159c2aebd2ed93b 205 Gene3D G3DSA:3.40.225.10 1 204 2.8E-50 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PA257_4092 c302df8c3b7d518f4159c2aebd2ed93b 205 SUPERFAMILY SSF53639 5 203 5.49E-47 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PA257_4092 c302df8c3b7d518f4159c2aebd2ed93b 205 SMART SM01007 10 198 9.1E-52 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal PA257_4092 c302df8c3b7d518f4159c2aebd2ed93b 205 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 12 202 3.3E-72 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 PA257_4092 c302df8c3b7d518f4159c2aebd2ed93b 205 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 197 2.3E-38 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal PA257_4092 c302df8c3b7d518f4159c2aebd2ed93b 205 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 205 117.113 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 PA257_1932 8f84ccda0f8b2bdfb2eb56b6a0e1a290 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 214 378 5.0E-49 T 12-10-2018 IPR000160 GGDEF domain PA257_1932 8f84ccda0f8b2bdfb2eb56b6a0e1a290 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 211 380 9.4E-49 T 12-10-2018 IPR000160 GGDEF domain PA257_1932 8f84ccda0f8b2bdfb2eb56b6a0e1a290 381 SUPERFAMILY SSF55073 219 380 1.96E-44 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_1932 8f84ccda0f8b2bdfb2eb56b6a0e1a290 381 Gene3D G3DSA:3.30.70.270 207 381 1.6E-55 T 12-10-2018 PA257_1932 8f84ccda0f8b2bdfb2eb56b6a0e1a290 381 SMART SM00267 203 381 7.5E-57 T 12-10-2018 IPR000160 GGDEF domain PA257_4505 86c54a8ef7d0b430d68c48e623deaa9a 353 SUPERFAMILY SSF63829 41 350 8.07E-58 T 12-10-2018 PA257_4505 86c54a8ef7d0b430d68c48e623deaa9a 353 Pfam PF03088 Strictosidine synthase 147 234 2.2E-30 T 12-10-2018 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 PA257_4505 86c54a8ef7d0b430d68c48e623deaa9a 353 Gene3D G3DSA:2.120.10.30 46 352 1.8E-88 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PA257_6301 876d9f93c456faa842278d68f97f9a19 307 Gene3D G3DSA:3.20.10.10 132 303 7.0E-55 T 12-10-2018 PA257_6301 876d9f93c456faa842278d68f97f9a19 307 SUPERFAMILY SSF56752 1 303 3.01E-104 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PA257_6301 876d9f93c456faa842278d68f97f9a19 307 Gene3D G3DSA:3.30.470.10 2 131 1.4E-41 T 12-10-2018 PA257_6301 876d9f93c456faa842278d68f97f9a19 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 PA257_6301 876d9f93c456faa842278d68f97f9a19 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 5.2E-146 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 PA257_6301 876d9f93c456faa842278d68f97f9a19 307 Pfam PF01063 Amino-transferase class IV 36 267 1.2E-54 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PA257_5229 7899a68f9259c7b4f6bf46eedb0bb8b6 124 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 11 120 4.9E-43 T 12-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 PA257_5229 7899a68f9259c7b4f6bf46eedb0bb8b6 124 Pfam PF07511 Protein of unknown function (DUF1525) 11 121 2.2E-42 T 12-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 PA257_6147 5d510b0dc4d16c0820e797d5420e56e9 88 Gene3D G3DSA:1.20.120.910 1 74 2.9E-25 T 12-10-2018 PA257_6147 5d510b0dc4d16c0820e797d5420e56e9 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 4.2E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PA257_6147 5d510b0dc4d16c0820e797d5420e56e9 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 4.2E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PA257_6147 5d510b0dc4d16c0820e797d5420e56e9 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 69 3.0E-13 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PA257_6147 5d510b0dc4d16c0820e797d5420e56e9 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PA257_6147 5d510b0dc4d16c0820e797d5420e56e9 88 SUPERFAMILY SSF57716 38 73 3.14E-8 T 12-10-2018 PA257_6147 5d510b0dc4d16c0820e797d5420e56e9 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 12 66 4.1E-17 T 12-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 Gene3D G3DSA:3.40.50.12740 2 210 8.6E-61 T 12-10-2018 PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 SUPERFAMILY SSF46894 132 211 2.07E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 Pfam PF00072 Response regulator receiver domain 4 116 2.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 SMART SM00448 2 115 2.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 204 1.3E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.5E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.5E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.5E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 SMART SM00421 147 204 4.4E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2973 4c9d68c368eab34ebd5716cf0bc9a0eb 214 SUPERFAMILY SSF52172 2 132 2.56E-33 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2869 3c871b68972d2cd858bf75c264c158db 364 Gene3D G3DSA:3.40.50.1100 97 193 1.7E-121 T 12-10-2018 PA257_2869 3c871b68972d2cd858bf75c264c158db 364 Gene3D G3DSA:3.40.50.1100 60 354 1.7E-121 T 12-10-2018 PA257_2869 3c871b68972d2cd858bf75c264c158db 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 62 350 4.7E-82 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_2869 3c871b68972d2cd858bf75c264c158db 364 SUPERFAMILY SSF53686 50 357 1.7E-97 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 Pfam PF00355 Rieske [2Fe-2S] domain 45 129 2.7E-20 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 88 111 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 Gene3D G3DSA:2.102.10.10 45 172 2.6E-109 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 Gene3D G3DSA:3.90.380.10 23 395 2.6E-109 T 12-10-2018 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 196 385 9.9E-18 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 SUPERFAMILY SSF55961 164 445 1.1E-70 T 12-10-2018 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 6.1E-46 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 60 75 6.1E-46 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 30 55 6.1E-46 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 6.1E-46 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 148 174 6.1E-46 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 81 101 6.1E-46 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 TIGRFAM TIGR03229 benzo_1_2_benA: benzoate 1,2-dioxygenase, large subunit 9 438 1.9E-262 T 12-10-2018 IPR017639 Benzoate 1,2-dioxygenase, large subunit PA257_3053 98aace30e129029f1bc40f9ad467caf9 455 SUPERFAMILY SSF50022 11 164 1.44E-44 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 SUPERFAMILY SSF51338 2 176 7.12E-63 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 ProSitePatterns PS00145 Urease active site. 316 332 - T 12-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 SUPERFAMILY SSF51338 417 476 2.01E-6 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 400 415 6.5E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 426 439 6.5E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 6.5E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 6.5E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 566 5.6E-292 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 Hamap MF_01953 Urease subunit alpha [ureC]. 1 566 56.758 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 Pfam PF01979 Amidohydrolase family 124 450 3.6E-79 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 Gene3D G3DSA:2.30.40.10 3 479 3.3E-297 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 SUPERFAMILY SSF51556 128 566 2.17E-202 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 Gene3D G3DSA:3.20.20.140 128 566 3.3E-297 T 12-10-2018 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 12-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6145 960b542e8ddfb3c6d5e8a849d530f05d 566 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 4.5E-56 T 12-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_2209 30b476074e187c183c593f78b9022e09 679 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 332 6.5E-87 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PA257_2209 30b476074e187c183c593f78b9022e09 679 Gene3D G3DSA:3.40.50.720 379 672 2.4E-113 T 12-10-2018 PA257_2209 30b476074e187c183c593f78b9022e09 679 SUPERFAMILY SSF51395 4 366 9.3E-114 T 12-10-2018 PA257_2209 30b476074e187c183c593f78b9022e09 679 Gene3D G3DSA:3.20.20.70 6 373 1.9E-124 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2209 30b476074e187c183c593f78b9022e09 679 SUPERFAMILY SSF51905 466 657 1.56E-19 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2209 30b476074e187c183c593f78b9022e09 679 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 379 641 3.0E-22 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_2209 30b476074e187c183c593f78b9022e09 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 625 641 1.4E-15 T 12-10-2018 PA257_2209 30b476074e187c183c593f78b9022e09 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 503 521 1.4E-15 T 12-10-2018 PA257_2209 30b476074e187c183c593f78b9022e09 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 463 481 1.4E-15 T 12-10-2018 PA257_2209 30b476074e187c183c593f78b9022e09 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 381 400 1.4E-15 T 12-10-2018 PA257_2209 30b476074e187c183c593f78b9022e09 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 626 640 2.6E-6 T 12-10-2018 PA257_2209 30b476074e187c183c593f78b9022e09 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 380 402 2.6E-6 T 12-10-2018 PA257_2209 30b476074e187c183c593f78b9022e09 679 SUPERFAMILY SSF51971 337 526 9.42E-43 T 12-10-2018 PA257_2209 30b476074e187c183c593f78b9022e09 679 Gene3D G3DSA:3.50.50.60 475 632 2.4E-113 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4154 ff759dffe06a39d807e282184edff1dd 509 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 184 1.3E-57 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_4154 ff759dffe06a39d807e282184edff1dd 509 Gene3D G3DSA:1.10.1040.50 190 494 4.7E-102 T 12-10-2018 PA257_4154 ff759dffe06a39d807e282184edff1dd 509 Gene3D G3DSA:3.40.50.720 2 189 2.4E-63 T 12-10-2018 PA257_4154 ff759dffe06a39d807e282184edff1dd 509 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 284 4.2E-31 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_4154 ff759dffe06a39d807e282184edff1dd 509 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 414 497 2.5E-22 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_4154 ff759dffe06a39d807e282184edff1dd 509 SUPERFAMILY SSF48179 186 290 3.74E-31 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_4154 ff759dffe06a39d807e282184edff1dd 509 SUPERFAMILY SSF48179 413 497 6.8E-21 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_4154 ff759dffe06a39d807e282184edff1dd 509 Gene3D G3DSA:3.30.750.190 291 411 4.7E-102 T 12-10-2018 PA257_4154 ff759dffe06a39d807e282184edff1dd 509 SUPERFAMILY SSF51735 2 186 1.75E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4426 9871050ef70ff9bbdc005cfe76936512 813 SUPERFAMILY SSF56935 122 813 2.62E-95 T 12-10-2018 PA257_4426 9871050ef70ff9bbdc005cfe76936512 813 SMART SM00965 53 104 4.9E-14 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_4426 9871050ef70ff9bbdc005cfe76936512 813 Gene3D G3DSA:2.40.170.20 274 812 1.2E-62 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_4426 9871050ef70ff9bbdc005cfe76936512 813 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 238 3.0E-18 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_4426 9871050ef70ff9bbdc005cfe76936512 813 Pfam PF00593 TonB dependent receptor 344 809 8.2E-43 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_4426 9871050ef70ff9bbdc005cfe76936512 813 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 139 794 5.3E-103 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_4426 9871050ef70ff9bbdc005cfe76936512 813 Gene3D G3DSA:2.170.130.10 121 243 6.0E-21 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_4426 9871050ef70ff9bbdc005cfe76936512 813 Gene3D G3DSA:3.55.50.30 28 102 2.2E-22 T 12-10-2018 PA257_0084 5ef4bf600bc4f4463e9712e4fecd75c7 221 SUPERFAMILY SSF56784 7 220 1.68E-55 T 12-10-2018 IPR036412 HAD-like superfamily PA257_0084 5ef4bf600bc4f4463e9712e4fecd75c7 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 189 2.9E-26 T 12-10-2018 PA257_0084 5ef4bf600bc4f4463e9712e4fecd75c7 221 Gene3D G3DSA:3.40.50.1000 11 208 2.5E-63 T 12-10-2018 IPR023214 HAD superfamily PA257_0084 5ef4bf600bc4f4463e9712e4fecd75c7 221 Gene3D G3DSA:1.10.150.240 22 88 2.5E-63 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PA257_1205 ba1195b18b314aba9c9fbfc8e4dc9884 391 Pfam PF03486 HI0933-like protein 1 381 5.1E-102 T 12-10-2018 PA257_1205 ba1195b18b314aba9c9fbfc8e4dc9884 391 SUPERFAMILY SSF160996 188 328 4.19E-11 T 12-10-2018 PA257_1205 ba1195b18b314aba9c9fbfc8e4dc9884 391 Gene3D G3DSA:1.10.8.260 257 312 9.1E-61 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily PA257_1205 ba1195b18b314aba9c9fbfc8e4dc9884 391 Gene3D G3DSA:3.50.50.60 6 380 9.1E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1205 ba1195b18b314aba9c9fbfc8e4dc9884 391 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 1 380 1.4E-77 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PA257_1205 ba1195b18b314aba9c9fbfc8e4dc9884 391 Gene3D G3DSA:2.40.30.10 176 329 9.1E-61 T 12-10-2018 PA257_1205 ba1195b18b314aba9c9fbfc8e4dc9884 391 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 11 387 3.8E-160 T 12-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 PA257_1205 ba1195b18b314aba9c9fbfc8e4dc9884 391 SUPERFAMILY SSF51905 1 386 2.41E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3754 0684a7f673546a71064bb8fdb66d7d4b 41 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 20 40 2.5E-12 T 12-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 PA257_3754 0684a7f673546a71064bb8fdb66d7d4b 41 Pfam PF08042 PqqA family 19 37 1.9E-10 T 12-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 PA257_3754 0684a7f673546a71064bb8fdb66d7d4b 41 Hamap MF_00656 Coenzyme PQQ synthesis protein A [pqqA]. 19 41 11.953 T 12-10-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 PA257_2809 55254305985bb5608ba2acf9a3defc73 962 Gene3D G3DSA:3.40.50.10810 38 298 1.0E-56 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PA257_2809 55254305985bb5608ba2acf9a3defc73 962 SUPERFAMILY SSF52540 32 236 2.47E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2809 55254305985bb5608ba2acf9a3defc73 962 Pfam PF00176 SNF2 family N-terminal domain 10 273 1.8E-31 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 PA257_2809 55254305985bb5608ba2acf9a3defc73 962 SMART SM00487 38 229 4.3E-22 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_2809 55254305985bb5608ba2acf9a3defc73 962 SUPERFAMILY SSF52540 160 596 1.28E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2809 55254305985bb5608ba2acf9a3defc73 962 Pfam PF00271 Helicase conserved C-terminal domain 455 552 1.1E-17 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2809 55254305985bb5608ba2acf9a3defc73 962 SMART SM00490 472 552 2.7E-21 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2809 55254305985bb5608ba2acf9a3defc73 962 Gene3D G3DSA:3.40.50.300 315 628 1.4E-40 T 12-10-2018 PA257_4510 f1045b6674915ec11696af2f5b4cd1d5 424 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 424 4.6E-135 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PA257_4510 f1045b6674915ec11696af2f5b4cd1d5 424 Gene3D G3DSA:2.40.160.60 24 424 6.3E-118 T 12-10-2018 PA257_4510 f1045b6674915ec11696af2f5b4cd1d5 424 SUPERFAMILY SSF56935 24 424 8.55E-92 T 12-10-2018 PA257_4377 85142116d6890fdb173af97db2358658 533 SUPERFAMILY SSF52518 2 180 2.54E-53 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_4377 85142116d6890fdb173af97db2358658 533 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 324 4.0E-27 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PA257_4377 85142116d6890fdb173af97db2358658 533 Gene3D G3DSA:3.40.50.970 1 185 5.5E-62 T 12-10-2018 PA257_4377 85142116d6890fdb173af97db2358658 533 SUPERFAMILY SSF52518 361 528 1.2E-44 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_4377 85142116d6890fdb173af97db2358658 533 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 171 7.6E-55 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PA257_4377 85142116d6890fdb173af97db2358658 533 SUPERFAMILY SSF52467 156 348 1.19E-37 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_4377 85142116d6890fdb173af97db2358658 533 Gene3D G3DSA:3.40.50.970 357 532 1.1E-43 T 12-10-2018 PA257_4377 85142116d6890fdb173af97db2358658 533 Gene3D G3DSA:3.40.50.1220 186 351 6.9E-39 T 12-10-2018 PA257_4377 85142116d6890fdb173af97db2358658 533 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 525 1.3E-33 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PA257_4377 85142116d6890fdb173af97db2358658 533 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PA257_0719 da59e4321591da868143d2dec027c65f 373 Pfam PF13776 Domain of unknown function (DUF4172) 6 87 1.9E-32 T 12-10-2018 IPR025230 Domain of unknown function DUF4172 PA257_0719 da59e4321591da868143d2dec027c65f 373 SUPERFAMILY SSF46785 276 370 1.88E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0719 da59e4321591da868143d2dec027c65f 373 SUPERFAMILY SSF140931 101 297 9.68E-36 T 12-10-2018 IPR036597 Fido-like domain superfamily PA257_0719 da59e4321591da868143d2dec027c65f 373 Gene3D G3DSA:1.10.3290.10 46 281 2.8E-36 T 12-10-2018 IPR036597 Fido-like domain superfamily PA257_0719 da59e4321591da868143d2dec027c65f 373 Gene3D G3DSA:1.10.10.10 282 372 1.6E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0719 da59e4321591da868143d2dec027c65f 373 Pfam PF02661 Fic/DOC family 114 227 6.1E-15 T 12-10-2018 IPR003812 Fido domain PA257_2820 3417b2313e9c9c7bf042f085c488e05e 609 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 382 400 2.0E-28 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_2820 3417b2313e9c9c7bf042f085c488e05e 609 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 444 458 2.0E-28 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_2820 3417b2313e9c9c7bf042f085c488e05e 609 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 337 355 2.0E-28 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_2820 3417b2313e9c9c7bf042f085c488e05e 609 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 411 429 2.0E-28 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_2820 3417b2313e9c9c7bf042f085c488e05e 609 SUPERFAMILY SSF52540 283 588 4.94E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2820 3417b2313e9c9c7bf042f085c488e05e 609 Gene3D G3DSA:3.40.50.300 261 513 6.8E-65 T 12-10-2018 PA257_2820 3417b2313e9c9c7bf042f085c488e05e 609 SMART SM00382 333 478 2.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2820 3417b2313e9c9c7bf042f085c488e05e 609 SMART SM01086 515 606 0.0012 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_2820 3417b2313e9c9c7bf042f085c488e05e 609 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 518 593 3.0E-5 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_2820 3417b2313e9c9c7bf042f085c488e05e 609 Pfam PF07724 AAA domain (Cdc48 subfamily) 333 506 4.8E-32 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_3520 7f49ec744232e3721ab84deb11d63401 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 332 3.9E-12 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 PA257_3520 7f49ec744232e3721ab84deb11d63401 337 Gene3D G3DSA:3.40.190.10 130 262 6.9E-57 T 12-10-2018 PA257_3520 7f49ec744232e3721ab84deb11d63401 337 PIRSF PIRSF017082 1 337 1.3E-74 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 PA257_3520 7f49ec744232e3721ab84deb11d63401 337 Gene3D G3DSA:3.40.190.150 33 325 6.9E-57 T 12-10-2018 PA257_0388 1699e44a26ba6e3a41fae41f9473aec7 116 Pfam PF04076 Bacterial OB fold (BOF) protein 19 113 1.2E-35 T 12-10-2018 IPR005220 Bacterial OB-fold PA257_0388 1699e44a26ba6e3a41fae41f9473aec7 116 SUPERFAMILY SSF101756 12 114 1.7E-29 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily PA257_0388 1699e44a26ba6e3a41fae41f9473aec7 116 Gene3D G3DSA:2.40.50.200 13 116 5.1E-30 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily PA257_1157 8b878b2c5b21c5d2184d5d6de72396d3 323 SMART SM00729 86 295 1.1E-13 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_1157 8b878b2c5b21c5d2184d5d6de72396d3 323 TIGRFAM TIGR00510 lipA: lipoyl synthase 34 317 8.2E-128 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PA257_1157 8b878b2c5b21c5d2184d5d6de72396d3 323 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 39 75 1.9E-7 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PA257_1157 8b878b2c5b21c5d2184d5d6de72396d3 323 PIRSF PIRSF005963 7 323 4.0E-128 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PA257_1157 8b878b2c5b21c5d2184d5d6de72396d3 323 Pfam PF04055 Radical SAM superfamily 93 252 1.3E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_1157 8b878b2c5b21c5d2184d5d6de72396d3 323 Hamap MF_00206 Lipoyl synthase [lipA]. 1 323 154.208 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PA257_1157 8b878b2c5b21c5d2184d5d6de72396d3 323 Gene3D G3DSA:3.20.20.70 78 303 2.8E-21 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1157 8b878b2c5b21c5d2184d5d6de72396d3 323 SUPERFAMILY SSF102114 52 318 8.63E-68 T 12-10-2018 PA257_0614 77dea90657029bbee217b3bd0593d40d 133 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 30 129 8.7E-10 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PA257_0614 77dea90657029bbee217b3bd0593d40d 133 Pfam PF03061 Thioesterase superfamily 47 123 5.0E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_0614 77dea90657029bbee217b3bd0593d40d 133 SUPERFAMILY SSF54637 4 131 2.59E-29 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_0614 77dea90657029bbee217b3bd0593d40d 133 Gene3D G3DSA:3.10.129.10 1 133 5.7E-44 T 12-10-2018 PA257_6086 dcfede94b1d3f1e218f227e2e1f64987 309 Pfam PF00561 alpha/beta hydrolase fold 33 135 1.2E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_6086 dcfede94b1d3f1e218f227e2e1f64987 309 SUPERFAMILY SSF53474 27 305 2.78E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6086 dcfede94b1d3f1e218f227e2e1f64987 309 Gene3D G3DSA:3.40.50.1820 25 309 4.9E-88 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_5652 6e6a86e774a35d121ee17392c9f3f415 176 Pfam PF08805 PilS N terminal 45 174 4.4E-31 T 12-10-2018 IPR014911 Type 4 secretion system, PilS, N-terminal PA257_5652 6e6a86e774a35d121ee17392c9f3f415 176 SUPERFAMILY SSF54523 41 174 5.1E-37 T 12-10-2018 PA257_5652 6e6a86e774a35d121ee17392c9f3f415 176 Gene3D G3DSA:3.30.1690.10 41 175 2.7E-34 T 12-10-2018 PA257_1487 a34c2cfbffa2ce2d1adc1f8c8ff3f2ce 399 Gene3D G3DSA:3.30.1540.10 235 327 4.2E-127 T 12-10-2018 PA257_1487 a34c2cfbffa2ce2d1adc1f8c8ff3f2ce 399 SUPERFAMILY SSF89796 6 399 5.1E-135 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily PA257_1487 a34c2cfbffa2ce2d1adc1f8c8ff3f2ce 399 Pfam PF02515 CoA-transferase family III 8 376 2.9E-121 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 PA257_1487 a34c2cfbffa2ce2d1adc1f8c8ff3f2ce 399 Gene3D G3DSA:3.40.50.10540 7 393 4.2E-127 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily PA257_0594 9e2e5c27e8b6374fe031d2d06ee26562 69 Gene3D G3DSA:2.40.50.140 3 67 2.3E-29 T 12-10-2018 PA257_0594 9e2e5c27e8b6374fe031d2d06ee26562 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 4.6E-29 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_0594 9e2e5c27e8b6374fe031d2d06ee26562 69 SUPERFAMILY SSF50249 3 68 4.41E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_0594 9e2e5c27e8b6374fe031d2d06ee26562 69 PIRSF PIRSF002599 1 69 1.5E-23 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 PA257_0594 9e2e5c27e8b6374fe031d2d06ee26562 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 35 - T 12-10-2018 IPR019844 Cold-shock conserved site PA257_0594 9e2e5c27e8b6374fe031d2d06ee26562 69 SMART SM00357 5 68 3.6E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 PA257_0594 9e2e5c27e8b6374fe031d2d06ee26562 69 PRINTS PR00050 Cold shock protein signature 26 35 1.7E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_0594 9e2e5c27e8b6374fe031d2d06ee26562 69 PRINTS PR00050 Cold shock protein signature 6 21 1.7E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_0594 9e2e5c27e8b6374fe031d2d06ee26562 69 PRINTS PR00050 Cold shock protein signature 41 59 1.7E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_0468 6971bcb467b7252e21bcd3ff4975aa9f 56 SUPERFAMILY SSF69786 1 49 2.75E-14 T 12-10-2018 IPR036591 YggU-like superfamily PA257_0468 6971bcb467b7252e21bcd3ff4975aa9f 56 Gene3D G3DSA:3.30.1200.10 1 54 2.5E-14 T 12-10-2018 IPR036591 YggU-like superfamily PA257_0468 6971bcb467b7252e21bcd3ff4975aa9f 56 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 1 39 2.9E-13 T 12-10-2018 IPR003746 Protein of unknown function DUF167 PA257_0468 6971bcb467b7252e21bcd3ff4975aa9f 56 SMART SM01152 1 41 2.9E-4 T 12-10-2018 IPR003746 Protein of unknown function DUF167 PA257_1360 27c568a6a4c043ae8a673f4938cd95c9 66 SUPERFAMILY SSF140319 2 64 4.18E-25 T 12-10-2018 IPR036762 IscX-like superfamily PA257_1360 27c568a6a4c043ae8a673f4938cd95c9 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 1.8E-30 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PA257_1360 27c568a6a4c043ae8a673f4938cd95c9 66 PIRSF PIRSF039003 3 66 5.1E-33 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PA257_1360 27c568a6a4c043ae8a673f4938cd95c9 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 5.5E-33 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PA257_1360 27c568a6a4c043ae8a673f4938cd95c9 66 Gene3D G3DSA:1.10.10.600 1 66 8.5E-29 T 12-10-2018 IPR036762 IscX-like superfamily PA257_2325 2e2d8ec879b03f579386b28d111cacbf 254 SUPERFAMILY SSF53448 5 251 1.41E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_2325 2e2d8ec879b03f579386b28d111cacbf 254 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 3 253 44.077 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 PA257_2325 2e2d8ec879b03f579386b28d111cacbf 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 246 2.6E-93 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 PA257_2325 2e2d8ec879b03f579386b28d111cacbf 254 Gene3D G3DSA:3.90.550.10 1 254 4.5E-99 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_2325 2e2d8ec879b03f579386b28d111cacbf 254 Pfam PF02348 Cytidylyltransferase 7 226 9.5E-56 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 PA257_3626 496dcf4a1448299136f2d13b0b484203 247 SUPERFAMILY SSF88713 6 246 4.15E-93 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PA257_3626 496dcf4a1448299136f2d13b0b484203 247 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 247 43.141 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PA257_3626 496dcf4a1448299136f2d13b0b484203 247 Pfam PF03746 LamB/YcsF family 6 245 9.2E-96 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PA257_3626 496dcf4a1448299136f2d13b0b484203 247 Gene3D G3DSA:3.20.20.370 1 247 6.0E-100 T 12-10-2018 PA257_4047 746fee8679ad5c43f533400bdb37e636 685 Gene3D G3DSA:3.20.20.450 437 684 2.4E-102 T 12-10-2018 IPR035919 EAL domain superfamily PA257_4047 746fee8679ad5c43f533400bdb37e636 685 SMART SM00267 252 423 7.3E-68 T 12-10-2018 IPR000160 GGDEF domain PA257_4047 746fee8679ad5c43f533400bdb37e636 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 2.7E-51 T 12-10-2018 IPR000160 GGDEF domain PA257_4047 746fee8679ad5c43f533400bdb37e636 685 SMART SM00052 433 679 7.9E-122 T 12-10-2018 IPR001633 EAL domain PA257_4047 746fee8679ad5c43f533400bdb37e636 685 SUPERFAMILY SSF141868 439 682 3.66E-90 T 12-10-2018 IPR035919 EAL domain superfamily PA257_4047 746fee8679ad5c43f533400bdb37e636 685 Pfam PF00563 EAL domain 440 674 5.3E-73 T 12-10-2018 IPR001633 EAL domain PA257_4047 746fee8679ad5c43f533400bdb37e636 685 SUPERFAMILY SSF55073 268 425 3.37E-54 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_4047 746fee8679ad5c43f533400bdb37e636 685 Gene3D G3DSA:3.30.70.270 258 436 1.9E-65 T 12-10-2018 PA257_4047 746fee8679ad5c43f533400bdb37e636 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 109 2.3E-21 T 12-10-2018 IPR005330 MHYT domain PA257_4047 746fee8679ad5c43f533400bdb37e636 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 182 245 8.7E-15 T 12-10-2018 IPR005330 MHYT domain PA257_4047 746fee8679ad5c43f533400bdb37e636 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 115 171 1.3E-15 T 12-10-2018 IPR005330 MHYT domain PA257_4047 746fee8679ad5c43f533400bdb37e636 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 261 421 5.1E-47 T 12-10-2018 IPR000160 GGDEF domain PA257_5601 c030480651c4bc1910b3a7fc8e5c2982 405 Gene3D G3DSA:1.20.81.30 57 173 2.5E-30 T 12-10-2018 PA257_5601 c030480651c4bc1910b3a7fc8e5c2982 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 PA257_5601 c030480651c4bc1910b3a7fc8e5c2982 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 2.3E-18 T 12-10-2018 IPR003004 GspF/PilC family PA257_5601 c030480651c4bc1910b3a7fc8e5c2982 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.3E-18 T 12-10-2018 IPR003004 GspF/PilC family PA257_5601 c030480651c4bc1910b3a7fc8e5c2982 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 2.3E-18 T 12-10-2018 IPR003004 GspF/PilC family PA257_5601 c030480651c4bc1910b3a7fc8e5c2982 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.3E-18 T 12-10-2018 IPR003004 GspF/PilC family PA257_5601 c030480651c4bc1910b3a7fc8e5c2982 405 Gene3D G3DSA:1.20.81.30 258 369 4.7E-28 T 12-10-2018 PA257_5601 c030480651c4bc1910b3a7fc8e5c2982 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.8E-32 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_5601 c030480651c4bc1910b3a7fc8e5c2982 405 Pfam PF00482 Type II secretion system (T2SS), protein F 276 397 1.1E-30 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_6954 de855e8b6e95fa009abdf0786df21191 611 Pfam PF01380 SIS domain 291 418 7.0E-33 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PA257_6954 de855e8b6e95fa009abdf0786df21191 611 Pfam PF01380 SIS domain 464 593 1.5E-25 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PA257_6954 de855e8b6e95fa009abdf0786df21191 611 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 611 1.8E-257 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 PA257_6954 de855e8b6e95fa009abdf0786df21191 611 Gene3D G3DSA:3.60.20.10 2 241 1.1E-78 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_6954 de855e8b6e95fa009abdf0786df21191 611 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 611 40.652 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 PA257_6954 de855e8b6e95fa009abdf0786df21191 611 Gene3D G3DSA:3.40.50.10490 449 596 2.4E-150 T 12-10-2018 PA257_6954 de855e8b6e95fa009abdf0786df21191 611 Pfam PF13522 Glutamine amidotransferase domain 67 182 1.9E-20 T 12-10-2018 PA257_6954 de855e8b6e95fa009abdf0786df21191 611 Gene3D G3DSA:3.40.50.10490 250 610 2.4E-150 T 12-10-2018 PA257_6954 de855e8b6e95fa009abdf0786df21191 611 SUPERFAMILY SSF53697 246 611 4.27E-118 T 12-10-2018 PA257_6954 de855e8b6e95fa009abdf0786df21191 611 SUPERFAMILY SSF56235 2 235 2.57E-73 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_5228 2aee60d1dca296c426d5de4b9aaf400b 164 Pfam PF04002 RadC-like JAB domain 44 162 1.3E-38 T 12-10-2018 IPR025657 RadC-like JAB domain PA257_5228 2aee60d1dca296c426d5de4b9aaf400b 164 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 164 1.1E-39 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 PA257_5228 2aee60d1dca296c426d5de4b9aaf400b 164 Gene3D G3DSA:3.40.140.10 41 164 1.1E-38 T 12-10-2018 PA257_5228 2aee60d1dca296c426d5de4b9aaf400b 164 SUPERFAMILY SSF102712 59 134 6.8E-5 T 12-10-2018 PA257_0315 7936e49510f89c13009d907d016e0998 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 8.5E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0315 7936e49510f89c13009d907d016e0998 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 8.5E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0315 7936e49510f89c13009d907d016e0998 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 8.5E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0315 7936e49510f89c13009d907d016e0998 121 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.3E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0315 7936e49510f89c13009d907d016e0998 121 SUPERFAMILY SSF46955 4 108 2.53E-16 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_0315 7936e49510f89c13009d907d016e0998 121 SMART SM00422 4 73 3.9E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0315 7936e49510f89c13009d907d016e0998 121 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 119 1.7E-63 T 12-10-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 PA257_0315 7936e49510f89c13009d907d016e0998 121 Gene3D G3DSA:1.10.1660.10 6 120 2.5E-15 T 12-10-2018 PA257_6312 b3d294da9968eef79b4122fe4ba6e12f 580 SUPERFAMILY SSF56176 497 569 3.54E-8 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_6312 b3d294da9968eef79b4122fe4ba6e12f 580 Gene3D G3DSA:3.30.465.10 498 570 4.5E-7 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_6312 b3d294da9968eef79b4122fe4ba6e12f 580 Gene3D G3DSA:1.20.1530.20 7 390 1.4E-20 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_6312 b3d294da9968eef79b4122fe4ba6e12f 580 Pfam PF02080 TrkA-C domain 418 483 2.3E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PA257_6312 b3d294da9968eef79b4122fe4ba6e12f 580 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 1.1E-56 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PA257_6312 b3d294da9968eef79b4122fe4ba6e12f 580 Pfam PF03471 Transporter associated domain 495 569 1.4E-10 T 12-10-2018 IPR005170 Transporter-associated domain PA257_6312 b3d294da9968eef79b4122fe4ba6e12f 580 SMART SM01091 492 571 1.3E-12 T 12-10-2018 IPR005170 Transporter-associated domain PA257_6312 b3d294da9968eef79b4122fe4ba6e12f 580 SUPERFAMILY SSF116726 411 483 3.53E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PA257_6312 b3d294da9968eef79b4122fe4ba6e12f 580 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 574 51.578 T 12-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 PA257_6312 b3d294da9968eef79b4122fe4ba6e12f 580 Gene3D G3DSA:3.30.70.1450 409 484 1.3E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PA257_0902 808213d99394bfa36a67f5c2a12157e1 496 Gene3D G3DSA:3.40.605.10 35 490 1.2E-171 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_0902 808213d99394bfa36a67f5c2a12157e1 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_0902 808213d99394bfa36a67f5c2a12157e1 496 Pfam PF00171 Aldehyde dehydrogenase family 32 491 3.6E-166 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_0902 808213d99394bfa36a67f5c2a12157e1 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_0902 808213d99394bfa36a67f5c2a12157e1 496 Gene3D G3DSA:3.40.309.10 271 459 1.2E-171 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_0902 808213d99394bfa36a67f5c2a12157e1 496 SUPERFAMILY SSF53720 16 494 3.4E-163 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_4632 55a253e10d8e79eb451e1c14d9cf5de4 109 Pfam PF03927 NapD protein 6 78 1.5E-25 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly PA257_4632 55a253e10d8e79eb451e1c14d9cf5de4 109 Gene3D G3DSA:3.30.70.920 5 74 1.2E-22 T 12-10-2018 PA257_4632 55a253e10d8e79eb451e1c14d9cf5de4 109 Hamap MF_02200 Chaperone NapD [napD]. 5 83 17.94 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly PA257_6308 17ffc402111c0cb6b33ceba7f4269970 215 Pfam PF01625 Peptide methionine sulfoxide reductase 52 204 3.5E-64 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_6308 17ffc402111c0cb6b33ceba7f4269970 215 Gene3D G3DSA:3.30.1060.10 9 215 2.5E-90 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_6308 17ffc402111c0cb6b33ceba7f4269970 215 SUPERFAMILY SSF55068 10 213 1.44E-79 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_6308 17ffc402111c0cb6b33ceba7f4269970 215 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 51 204 3.8E-65 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_6308 17ffc402111c0cb6b33ceba7f4269970 215 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 49 210 36.888 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_3408 987e7c85e5988a7b61990372afb59a89 367 Gene3D G3DSA:3.40.50.2000 1 190 8.3E-7 T 12-10-2018 PA257_3408 987e7c85e5988a7b61990372afb59a89 367 Pfam PF00534 Glycosyl transferases group 1 199 302 8.6E-11 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_3408 987e7c85e5988a7b61990372afb59a89 367 SUPERFAMILY SSF53756 13 366 3.24E-44 T 12-10-2018 PA257_3408 987e7c85e5988a7b61990372afb59a89 367 Pfam PF13439 Glycosyltransferase Family 4 17 183 1.5E-9 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PA257_3408 987e7c85e5988a7b61990372afb59a89 367 Gene3D G3DSA:3.40.50.2000 191 349 4.1E-20 T 12-10-2018 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 Pfam PF00009 Elongation factor Tu GTP binding domain 13 207 2.7E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 PRINTS PR00315 GTP-binding elongation factor signature 17 30 2.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 PRINTS PR00315 GTP-binding elongation factor signature 81 91 2.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 PRINTS PR00315 GTP-binding elongation factor signature 134 143 2.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 PRINTS PR00315 GTP-binding elongation factor signature 61 69 2.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 PRINTS PR00315 GTP-binding elongation factor signature 97 108 2.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 SUPERFAMILY SSF50465 304 399 4.03E-36 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 Pfam PF03144 Elongation factor Tu domain 2 231 299 1.2E-15 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 Hamap MF_00118_B Elongation factor Tu [tuf]. 4 400 59.831 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 SUPERFAMILY SSF50447 211 307 1.58E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 SUPERFAMILY SSF52540 9 225 4.15E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 150 2.9E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 Gene3D G3DSA:2.40.30.10 344 399 1.2E-29 T 12-10-2018 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 Pfam PF03143 Elongation factor Tu C-terminal domain 304 398 1.1E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 Gene3D G3DSA:3.40.50.300 4 209 6.5E-72 T 12-10-2018 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 4 400 6.1E-227 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_0816 4a583dea4723d3a86bbdf82595c0ecb0 400 Gene3D G3DSA:2.40.30.10 212 340 2.2E-53 T 12-10-2018 PA257_1311 f262b8dd4fa86444581b73c7bc6ea2e8 78 SUPERFAMILY SSF82771 1 57 1.83E-6 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 PA257_1311 f262b8dd4fa86444581b73c7bc6ea2e8 78 Gene3D G3DSA:3.40.1440.10 1 73 4.9E-19 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 PA257_1311 f262b8dd4fa86444581b73c7bc6ea2e8 78 Pfam PF01541 GIY-YIG catalytic domain 1 58 2.2E-8 T 12-10-2018 IPR000305 GIY-YIG endonuclease PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 SMART SM00847 471 561 5.9E-37 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 SUPERFAMILY SSF52540 74 591 2.15E-104 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 Pfam PF04408 Helicase associated domain (HA2) 474 558 8.2E-20 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 SMART SM00382 87 391 9.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 Pfam PF00271 Helicase conserved C-terminal domain 294 410 1.5E-11 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 647 723 7.5E-22 T 12-10-2018 IPR011709 Domain of unknown function DUF1605 PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 Gene3D G3DSA:3.40.50.300 20 247 3.5E-76 T 12-10-2018 PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 Pfam PF11898 Domain of unknown function (DUF3418) 736 1323 2.8E-201 T 12-10-2018 IPR024590 RNA helicase HrpA, C-terminal PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 Gene3D G3DSA:3.40.50.300 248 428 2.9E-56 T 12-10-2018 PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 SMART SM00490 311 411 1.6E-15 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 SMART SM00487 69 254 3.7E-24 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 Gene3D G3DSA:1.20.120.1080 455 552 1.3E-20 T 12-10-2018 PA257_1984 d3a17ab73ff9f3523b41e65257f238fb 1326 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1323 0.0 T 12-10-2018 IPR010222 RNA helicase HrpA GO:0004004 PA257_0398 e190795b7f715ba447fb41449cfca21d 647 SUPERFAMILY SSF53187 38 286 4.29E-41 T 12-10-2018 PA257_0398 e190795b7f715ba447fb41449cfca21d 647 Pfam PF04389 Peptidase family M28 82 286 9.5E-28 T 12-10-2018 IPR007484 Peptidase M28 PA257_0398 e190795b7f715ba447fb41449cfca21d 647 SMART SM00869 366 636 1.9E-37 T 12-10-2018 IPR005546 Autotransporter beta-domain PA257_0398 e190795b7f715ba447fb41449cfca21d 647 Gene3D G3DSA:2.40.128.130 330 647 1.6E-45 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily PA257_0398 e190795b7f715ba447fb41449cfca21d 647 Pfam PF03797 Autotransporter beta-domain 380 626 2.4E-41 T 12-10-2018 IPR005546 Autotransporter beta-domain PA257_0398 e190795b7f715ba447fb41449cfca21d 647 Gene3D G3DSA:3.40.630.10 31 315 3.8E-40 T 12-10-2018 PA257_0398 e190795b7f715ba447fb41449cfca21d 647 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 479 647 3.5E-14 T 12-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 PA257_0398 e190795b7f715ba447fb41449cfca21d 647 SUPERFAMILY SSF103515 337 647 3.4E-36 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily PA257_2336 39cc81e8e60bdcd790f016f114b22e89 326 SUPERFAMILY SSF53659 1 324 6.17E-98 T 12-10-2018 PA257_2336 39cc81e8e60bdcd790f016f114b22e89 326 Gene3D G3DSA:3.40.718.10 1 324 5.9E-116 T 12-10-2018 PA257_2336 39cc81e8e60bdcd790f016f114b22e89 326 Pfam PF02504 Fatty acid synthesis protein 1 315 7.5E-93 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 PA257_2336 39cc81e8e60bdcd790f016f114b22e89 326 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 323 8.9E-97 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 PA257_2336 39cc81e8e60bdcd790f016f114b22e89 326 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 326 140.607 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 PA257_2336 39cc81e8e60bdcd790f016f114b22e89 326 PIRSF PIRSF002465 1 325 1.2E-117 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 PA257_2804 9194027d1cbbebbe905d90106f8975fd 338 Pfam PF01409 tRNA synthetases class II core domain (F) 92 337 6.9E-109 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 PA257_2804 9194027d1cbbebbe905d90106f8975fd 338 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 337 2.4E-107 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PA257_2804 9194027d1cbbebbe905d90106f8975fd 338 SUPERFAMILY SSF55681 92 338 2.68E-82 T 12-10-2018 PA257_2804 9194027d1cbbebbe905d90106f8975fd 338 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 337 50.826 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 PA257_2804 9194027d1cbbebbe905d90106f8975fd 338 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 6.7E-28 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PA257_2804 9194027d1cbbebbe905d90106f8975fd 338 Gene3D G3DSA:3.30.930.10 7 338 4.6E-123 T 12-10-2018 PA257_2804 9194027d1cbbebbe905d90106f8975fd 338 SUPERFAMILY SSF46589 13 99 1.46E-23 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 PA257_0873 7d84c899123f9122191cb7f244144186 574 SMART SM00382 353 539 1.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0873 7d84c899123f9122191cb7f244144186 574 SUPERFAMILY SSF90123 16 318 7.59E-26 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_0873 7d84c899123f9122191cb7f244144186 574 Gene3D G3DSA:3.40.50.300 322 572 4.2E-69 T 12-10-2018 PA257_0873 7d84c899123f9122191cb7f244144186 574 Gene3D G3DSA:1.20.1560.10 15 311 1.0E-14 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_0873 7d84c899123f9122191cb7f244144186 574 SUPERFAMILY SSF52540 325 560 1.48E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0873 7d84c899123f9122191cb7f244144186 574 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0873 7d84c899123f9122191cb7f244144186 574 Pfam PF00005 ABC transporter 344 493 8.8E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 SUPERFAMILY SSF82866 299 506 2.62E-34 T 12-10-2018 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 Gene3D G3DSA:3.30.70.1430 570 675 0.0 T 12-10-2018 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 Gene3D G3DSA:3.30.2090.10 727 820 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 Gene3D G3DSA:3.30.70.1320 135 333 0.0 T 12-10-2018 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 SUPERFAMILY SSF82714 192 274 9.29E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 SUPERFAMILY SSF82714 726 817 3.79E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 Gene3D G3DSA:3.30.70.1430 42 828 0.0 T 12-10-2018 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 Gene3D G3DSA:1.20.1640.10 518 1033 0.0 T 12-10-2018 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 Gene3D G3DSA:3.30.70.1440 676 878 0.0 T 12-10-2018 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 SUPERFAMILY SSF82693 155 333 8.72E-21 T 12-10-2018 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.5E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.5E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.5E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.5E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 1.5E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.5E-20 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1046 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 Pfam PF00873 AcrB/AcrD/AcrF family 5 1035 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 Gene3D G3DSA:3.30.2090.10 189 280 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 Gene3D G3DSA:1.20.1640.10 15 517 0.0 T 12-10-2018 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 SUPERFAMILY SSF82693 42 127 5.49E-24 T 12-10-2018 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 SUPERFAMILY SSF82866 814 1039 1.19E-58 T 12-10-2018 PA257_3051 780a9b2aaedf0acc5c8e609d13f2baa6 1051 SUPERFAMILY SSF82693 579 668 1.78E-6 T 12-10-2018 PA257_4832 95591346b66bb71eda85b44842cea8dd 839 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 313 323 - T 12-10-2018 IPR018030 Fimbrial membrane usher, conserved site PA257_4832 95591346b66bb71eda85b44842cea8dd 839 Gene3D G3DSA:3.10.20.410 34 162 9.9E-30 T 12-10-2018 PA257_4832 95591346b66bb71eda85b44842cea8dd 839 Pfam PF13953 PapC C-terminal domain 759 820 4.7E-15 T 12-10-2018 IPR025949 PapC-like, C-terminal domain PA257_4832 95591346b66bb71eda85b44842cea8dd 839 SUPERFAMILY SSF141729 58 176 2.49E-29 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 PA257_4832 95591346b66bb71eda85b44842cea8dd 839 Gene3D G3DSA:2.60.40.3110 271 360 2.8E-34 T 12-10-2018 PA257_4832 95591346b66bb71eda85b44842cea8dd 839 Gene3D G3DSA:2.60.40.2610 664 754 1.2E-29 T 12-10-2018 PA257_4832 95591346b66bb71eda85b44842cea8dd 839 Pfam PF00577 Outer membrane usher protein 199 749 1.1E-165 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 PA257_4832 95591346b66bb71eda85b44842cea8dd 839 Pfam PF13954 PapC N-terminal domain 36 184 5.9E-41 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 PA257_4832 95591346b66bb71eda85b44842cea8dd 839 Gene3D G3DSA:2.60.40.2070 756 839 3.3E-13 T 12-10-2018 PA257_5906 f8b50b20920e77e0416703724c2b4f09 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.2E-41 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PA257_5906 f8b50b20920e77e0416703724c2b4f09 574 SUPERFAMILY SSF52467 189 360 4.36E-62 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_5906 f8b50b20920e77e0416703724c2b4f09 574 SUPERFAMILY SSF52518 4 179 1.3E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_5906 f8b50b20920e77e0416703724c2b4f09 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 7.0E-49 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PA257_5906 f8b50b20920e77e0416703724c2b4f09 574 Gene3D G3DSA:3.40.50.970 1 181 3.3E-73 T 12-10-2018 PA257_5906 f8b50b20920e77e0416703724c2b4f09 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 3.9E-258 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PA257_5906 f8b50b20920e77e0416703724c2b4f09 574 Gene3D G3DSA:3.40.50.1220 191 360 6.5E-58 T 12-10-2018 PA257_5906 f8b50b20920e77e0416703724c2b4f09 574 SUPERFAMILY SSF52518 374 567 4.52E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_5906 f8b50b20920e77e0416703724c2b4f09 574 Gene3D G3DSA:3.40.50.970 367 566 5.8E-63 T 12-10-2018 PA257_5906 f8b50b20920e77e0416703724c2b4f09 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 165 2.7E-60 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 Gene3D G3DSA:3.20.20.450 462 712 7.6E-100 T 12-10-2018 IPR035919 EAL domain superfamily PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 Pfam PF03707 Bacterial signalling protein N terminal repeat 69 125 2.0E-16 T 12-10-2018 IPR005330 MHYT domain PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 Pfam PF03707 Bacterial signalling protein N terminal repeat 202 263 1.1E-6 T 12-10-2018 IPR005330 MHYT domain PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 Pfam PF03707 Bacterial signalling protein N terminal repeat 132 184 3.5E-15 T 12-10-2018 IPR005330 MHYT domain PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 SUPERFAMILY SSF55073 293 449 4.51E-47 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 SMART SM00267 277 448 1.0E-55 T 12-10-2018 IPR000160 GGDEF domain PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 284 446 1.4E-45 T 12-10-2018 IPR000160 GGDEF domain PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 Pfam PF00563 EAL domain 464 699 1.1E-75 T 12-10-2018 IPR001633 EAL domain PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 Gene3D G3DSA:3.30.70.270 282 461 5.0E-55 T 12-10-2018 PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 444 1.4E-46 T 12-10-2018 IPR000160 GGDEF domain PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 SMART SM00052 458 704 6.5E-110 T 12-10-2018 IPR001633 EAL domain PA257_1965 198318cc17dc5aa15dce679b5b39723f 726 SUPERFAMILY SSF141868 463 712 2.35E-88 T 12-10-2018 IPR035919 EAL domain superfamily PA257_3858 5cd974247938799d3863d42fb2678fb4 207 Gene3D G3DSA:1.20.1050.10 84 202 4.5E-44 T 12-10-2018 PA257_3858 5cd974247938799d3863d42fb2678fb4 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 80 7.0E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_3858 5cd974247938799d3863d42fb2678fb4 207 SUPERFAMILY SSF47616 80 200 5.57E-28 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_3858 5cd974247938799d3863d42fb2678fb4 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 196 6.0E-6 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_3858 5cd974247938799d3863d42fb2678fb4 207 Gene3D G3DSA:3.40.30.10 1 83 7.2E-33 T 12-10-2018 PA257_3858 5cd974247938799d3863d42fb2678fb4 207 SUPERFAMILY SSF52833 1 85 1.88E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 SUPERFAMILY SSF46785 261 334 1.47E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 SMART SM00382 55 182 7.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 Gene3D G3DSA:3.40.50.300 22 185 6.5E-37 T 12-10-2018 PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 Gene3D G3DSA:1.10.8.60 186 259 1.3E-31 T 12-10-2018 PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 1.2E-151 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 239 8.9E-117 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 352 182.798 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 2.6E-33 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 SUPERFAMILY SSF52540 24 255 1.84E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 337 1.0E-42 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PA257_4870 4aad00807a06f2186c0c7c086fb2e5df 352 Gene3D G3DSA:1.10.10.10 261 338 3.4E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 247 3.4E-63 T 12-10-2018 PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 Gene3D G3DSA:3.40.50.720 1 248 5.4E-83 T 12-10-2018 PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 SUPERFAMILY SSF51735 4 247 1.05E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.8E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 9.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2168 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0858 ac0d1b6be9719a22e63bd4a16ba0b937 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.518 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0858 ac0d1b6be9719a22e63bd4a16ba0b937 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.1E-45 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0858 ac0d1b6be9719a22e63bd4a16ba0b937 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0858 ac0d1b6be9719a22e63bd4a16ba0b937 129 Gene3D G3DSA:3.90.1030.10 1 117 3.2E-46 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0858 ac0d1b6be9719a22e63bd4a16ba0b937 129 Pfam PF01196 Ribosomal protein L17 20 116 2.6E-33 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0858 ac0d1b6be9719a22e63bd4a16ba0b937 129 SUPERFAMILY SSF64263 1 119 5.1E-50 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5437 2fddb44d62bc068fe5d986ae848f186e 354 Pfam PF09375 Imelysin 36 332 1.1E-56 T 12-10-2018 IPR018976 Imelysin-like domain PA257_5437 2fddb44d62bc068fe5d986ae848f186e 354 Gene3D G3DSA:1.20.1420.20 19 354 2.6E-87 T 12-10-2018 IPR038352 Imelysin-like domain superfamily PA257_2545 8fbe1b8deab8c3a1a77664d959b69b90 139 Gene3D G3DSA:3.30.450.150 2 139 3.9E-37 T 12-10-2018 IPR038084 GlcG-like domain superfamily PA257_2545 8fbe1b8deab8c3a1a77664d959b69b90 139 SUPERFAMILY SSF143744 6 137 1.31E-32 T 12-10-2018 IPR038084 GlcG-like domain superfamily PA257_2545 8fbe1b8deab8c3a1a77664d959b69b90 139 Pfam PF03928 Haem-degrading 11 134 9.2E-26 T 12-10-2018 IPR005624 Haem-degrading PA257_4727 b8400f3085f74960b6fcefb0becf4699 376 SUPERFAMILY SSF55961 142 373 1.96E-29 T 12-10-2018 PA257_4727 b8400f3085f74960b6fcefb0becf4699 376 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 13 38 8.6E-9 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_4727 b8400f3085f74960b6fcefb0becf4699 376 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 43 58 8.6E-9 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_4727 b8400f3085f74960b6fcefb0becf4699 376 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 83 103 8.6E-9 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_4727 b8400f3085f74960b6fcefb0becf4699 376 SUPERFAMILY SSF50022 3 142 5.24E-36 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_4727 b8400f3085f74960b6fcefb0becf4699 376 Gene3D G3DSA:3.90.380.10 4 359 4.2E-46 T 12-10-2018 PA257_4727 b8400f3085f74960b6fcefb0becf4699 376 Gene3D G3DSA:2.102.10.10 26 146 4.2E-46 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_4727 b8400f3085f74960b6fcefb0becf4699 376 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 174 371 1.3E-15 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 PA257_4727 b8400f3085f74960b6fcefb0becf4699 376 Pfam PF00355 Rieske [2Fe-2S] domain 29 108 4.2E-13 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PA257_5465 c4347123f802c085f3d37aa8f19d712f 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 186 7.5E-53 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PA257_5465 c4347123f802c085f3d37aa8f19d712f 192 Gene3D G3DSA:1.20.1200.10 17 190 1.2E-57 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PA257_5465 c4347123f802c085f3d37aa8f19d712f 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 186 1.0E-84 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PA257_5465 c4347123f802c085f3d37aa8f19d712f 192 SUPERFAMILY SSF89028 7 186 4.12E-60 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PA257_5465 c4347123f802c085f3d37aa8f19d712f 192 Pfam PF01923 Cobalamin adenosyltransferase 8 173 3.2E-56 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PA257_2434 32c0ed00d7eccedb69c54a3ddd3597bd 232 SUPERFAMILY SSF51366 5 230 2.07E-73 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PA257_2434 32c0ed00d7eccedb69c54a3ddd3597bd 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 5 232 39.575 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_2434 32c0ed00d7eccedb69c54a3ddd3597bd 232 Gene3D G3DSA:3.20.20.70 1 232 4.8E-83 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2434 32c0ed00d7eccedb69c54a3ddd3597bd 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 9 227 2.1E-56 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_2434 32c0ed00d7eccedb69c54a3ddd3597bd 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_2434 32c0ed00d7eccedb69c54a3ddd3597bd 232 SMART SM00934 7 227 1.3E-99 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_2434 32c0ed00d7eccedb69c54a3ddd3597bd 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 226 1.4E-50 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_0941 357dd26bc0ceed05ab21b7bd8c48da9d 363 SUPERFAMILY SSF51735 159 315 8.97E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0941 357dd26bc0ceed05ab21b7bd8c48da9d 363 SUPERFAMILY SSF50129 9 192 3.96E-51 T 12-10-2018 IPR011032 GroES-like superfamily PA257_0941 357dd26bc0ceed05ab21b7bd8c48da9d 363 Gene3D G3DSA:3.40.50.720 170 306 1.3E-105 T 12-10-2018 PA257_0941 357dd26bc0ceed05ab21b7bd8c48da9d 363 Pfam PF00107 Zinc-binding dehydrogenase 194 320 4.4E-28 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_0941 357dd26bc0ceed05ab21b7bd8c48da9d 363 Pfam PF13823 Alcohol dehydrogenase GroES-associated 11 28 2.6E-6 T 12-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated PA257_0941 357dd26bc0ceed05ab21b7bd8c48da9d 363 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 151 2.8E-32 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_0941 357dd26bc0ceed05ab21b7bd8c48da9d 363 SMART SM00829 18 359 1.0E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_0941 357dd26bc0ceed05ab21b7bd8c48da9d 363 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 80 94 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PA257_0941 357dd26bc0ceed05ab21b7bd8c48da9d 363 Gene3D G3DSA:3.90.180.10 18 341 1.3E-105 T 12-10-2018 PA257_5447 e68ebd8e0100c9352ec631ae186aa7bf 264 Pfam PF01569 PAP2 superfamily 100 229 1.2E-14 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PA257_5447 e68ebd8e0100c9352ec631ae186aa7bf 264 SUPERFAMILY SSF48317 19 232 1.96E-11 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PA257_5447 e68ebd8e0100c9352ec631ae186aa7bf 264 Gene3D G3DSA:1.20.144.10 129 250 1.9E-9 T 12-10-2018 PA257_5276 5c49f939d3bfd14c0891f6dc70eb4050 327 Gene3D G3DSA:1.10.443.10 160 326 9.5E-38 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_5276 5c49f939d3bfd14c0891f6dc70eb4050 327 Pfam PF00589 Phage integrase family 271 312 8.6E-11 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_5276 5c49f939d3bfd14c0891f6dc70eb4050 327 Pfam PF00589 Phage integrase family 163 241 5.2E-8 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_5276 5c49f939d3bfd14c0891f6dc70eb4050 327 SUPERFAMILY SSF56349 60 320 6.77E-44 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_2279 9bf894b1dea938571efff9e5ebe49a6a 302 SUPERFAMILY SSF111331 4 291 2.4E-66 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PA257_2279 9bf894b1dea938571efff9e5ebe49a6a 302 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 5 295 1.4E-144 T 12-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 PA257_2279 9bf894b1dea938571efff9e5ebe49a6a 302 Gene3D G3DSA:3.40.50.10330 24 284 2.2E-77 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 PA257_2279 9bf894b1dea938571efff9e5ebe49a6a 302 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 5 296 44.089 T 12-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 PA257_2279 9bf894b1dea938571efff9e5ebe49a6a 302 Gene3D G3DSA:2.60.200.40 122 281 2.2E-77 T 12-10-2018 PA257_2279 9bf894b1dea938571efff9e5ebe49a6a 302 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 8 290 1.2E-59 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase PA257_2279 9bf894b1dea938571efff9e5ebe49a6a 302 Pfam PF00781 Diacylglycerol kinase catalytic domain 12 125 4.8E-25 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PA257_2279 9bf894b1dea938571efff9e5ebe49a6a 302 SMART SM00046 6 125 4.9E-14 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PA257_5462 80c806b62a429dbfeb73cd1a88705021 321 Gene3D G3DSA:3.40.50.2300 2 128 8.2E-27 T 12-10-2018 PA257_5462 80c806b62a429dbfeb73cd1a88705021 321 SMART SM00448 6 122 1.1E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5462 80c806b62a429dbfeb73cd1a88705021 321 SMART SM00267 142 310 2.3E-5 T 12-10-2018 IPR000160 GGDEF domain PA257_5462 80c806b62a429dbfeb73cd1a88705021 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 282 4.7E-12 T 12-10-2018 IPR000160 GGDEF domain PA257_5462 80c806b62a429dbfeb73cd1a88705021 321 SUPERFAMILY SSF52172 5 148 1.71E-28 T 12-10-2018 IPR011006 CheY-like superfamily PA257_5462 80c806b62a429dbfeb73cd1a88705021 321 SUPERFAMILY SSF55073 158 310 5.57E-12 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_5462 80c806b62a429dbfeb73cd1a88705021 321 Pfam PF00072 Response regulator receiver domain 8 122 1.6E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5462 80c806b62a429dbfeb73cd1a88705021 321 Gene3D G3DSA:3.30.70.270 147 316 2.3E-16 T 12-10-2018 PA257_2936 9cefb838f8121a0f4bd3dbb2803eb9a3 72 SMART SM00316 4 72 1.7E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_2936 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.7E-27 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 PA257_2936 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Gene3D G3DSA:2.40.50.140 1 72 8.6E-36 T 12-10-2018 PA257_2936 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.985 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PA257_2936 9cefb838f8121a0f4bd3dbb2803eb9a3 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.4E-38 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PA257_2936 9cefb838f8121a0f4bd3dbb2803eb9a3 72 SUPERFAMILY SSF50249 1 70 1.44E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_4176 944f76a46e2c03ebe17d022b28d90fdf 158 Pfam PF12975 Domain of unknown function (DUF3859) 28 157 3.8E-45 T 12-10-2018 IPR024331 Domain of unknown function DUF3859 PA257_4176 944f76a46e2c03ebe17d022b28d90fdf 158 Gene3D G3DSA:2.60.40.2390 53 158 1.7E-44 T 12-10-2018 PA257_5277 31f779b79c7ec9dd2b7ae7facf4ee198 430 ProDom PD140749 ORF PHAGE PA0727 1 429 0.0 T 12-10-2018 PA257_4722 173349794ea864d41b88b17395719335 128 Pfam PF03646 FlaG protein 36 125 1.6E-24 T 12-10-2018 IPR005186 FlaG protein PA257_4722 173349794ea864d41b88b17395719335 128 SUPERFAMILY SSF160214 52 127 8.5E-24 T 12-10-2018 IPR035924 FlaG-like superfamily PA257_4722 173349794ea864d41b88b17395719335 128 Gene3D G3DSA:3.30.160.170 32 124 8.0E-15 T 12-10-2018 IPR035924 FlaG-like superfamily PA257_5487 f02599f87a2736e9d350e1ae425a2ff7 313 Gene3D G3DSA:3.40.50.150 10 311 5.7E-104 T 12-10-2018 PA257_5487 f02599f87a2736e9d350e1ae425a2ff7 313 Pfam PF01795 MraW methylase family 5 311 6.8E-111 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PA257_5487 f02599f87a2736e9d350e1ae425a2ff7 313 SUPERFAMILY SSF53335 7 312 2.79E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5487 f02599f87a2736e9d350e1ae425a2ff7 313 Gene3D G3DSA:1.10.150.170 114 216 5.7E-104 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 PA257_5487 f02599f87a2736e9d350e1ae425a2ff7 313 SUPERFAMILY SSF81799 116 215 2.49E-34 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 PA257_5487 f02599f87a2736e9d350e1ae425a2ff7 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 311 1.1E-113 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PA257_5487 f02599f87a2736e9d350e1ae425a2ff7 313 PIRSF PIRSF004486 1 313 1.3E-102 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PA257_5487 f02599f87a2736e9d350e1ae425a2ff7 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 312 39.415 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PA257_4890 092226fc64ef7a8cca956cdc3c0b9d4a 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 6 196 5.2E-45 T 12-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 PA257_4890 092226fc64ef7a8cca956cdc3c0b9d4a 198 ProSitePatterns PS00201 Flavodoxin signature. 8 24 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PA257_4890 092226fc64ef7a8cca956cdc3c0b9d4a 198 Gene3D G3DSA:3.40.50.360 1 198 8.3E-69 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_4890 092226fc64ef7a8cca956cdc3c0b9d4a 198 SUPERFAMILY SSF52218 4 196 3.01E-64 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_4890 092226fc64ef7a8cca956cdc3c0b9d4a 198 Pfam PF03358 NADPH-dependent FMN reductase 13 141 4.0E-9 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PA257_2076 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 SUPERFAMILY SSF46689 199 249 1.7E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2076 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 Pfam PF12833 Helix-turn-helix domain 169 247 1.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2076 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 Gene3D G3DSA:2.60.120.10 11 75 3.2E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_2076 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 230 5.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_2076 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 246 5.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_2076 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 SUPERFAMILY SSF46689 152 196 9.68E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2076 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 Gene3D G3DSA:1.10.10.60 148 253 8.7E-29 T 12-10-2018 PA257_2076 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 SUPERFAMILY SSF51182 17 129 1.63E-6 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_2076 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 SMART SM00342 163 246 1.5E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3768 5e5203c7d6d30c9f09efb365ad6aae8c 761 SUPERFAMILY SSF63411 2 204 9.98E-35 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PA257_3768 5e5203c7d6d30c9f09efb365ad6aae8c 761 Gene3D G3DSA:3.30.830.10 1 214 3.1E-50 T 12-10-2018 PA257_3768 5e5203c7d6d30c9f09efb365ad6aae8c 761 Gene3D G3DSA:3.30.830.10 584 751 3.3E-20 T 12-10-2018 PA257_3768 5e5203c7d6d30c9f09efb365ad6aae8c 761 TIGRFAM TIGR02110 PQQ_syn_pqqF: coenzyme PQQ biosynthesis protein PqqF 1 674 1.1E-271 T 12-10-2018 IPR011844 Coenzyme PQQ biosynthesis protein PqqF GO:0004222|GO:0006508|GO:0008270|GO:0018189 PA257_3768 5e5203c7d6d30c9f09efb365ad6aae8c 761 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 28 51 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 PA257_3768 5e5203c7d6d30c9f09efb365ad6aae8c 761 SUPERFAMILY SSF63411 578 754 9.17E-20 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PA257_3768 5e5203c7d6d30c9f09efb365ad6aae8c 761 Pfam PF00675 Insulinase (Peptidase family M16) 10 130 5.8E-29 T 12-10-2018 IPR011765 Peptidase M16, N-terminal PA257_3768 5e5203c7d6d30c9f09efb365ad6aae8c 761 Pfam PF05193 Peptidase M16 inactive domain 170 327 8.1E-12 T 12-10-2018 IPR007863 Peptidase M16, C-terminal PA257_6924 f42edf6f36caa10457da5957967c1d82 455 SUPERFAMILY SSF55931 118 453 9.32E-104 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_6924 f42edf6f36caa10457da5957967c1d82 455 SMART SM01230 117 373 1.6E-98 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_6924 f42edf6f36caa10457da5957967c1d82 455 Gene3D G3DSA:3.30.590.10 120 455 5.4E-100 T 12-10-2018 PA257_6924 f42edf6f36caa10457da5957967c1d82 455 Pfam PF00120 Glutamine synthetase, catalytic domain 118 451 4.8E-106 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_6924 f42edf6f36caa10457da5957967c1d82 455 SUPERFAMILY SSF54368 9 111 5.36E-8 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_1714 83db1c8e85b2b8c97aa4037572b3aaa3 337 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 12-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PA257_1714 83db1c8e85b2b8c97aa4037572b3aaa3 337 Gene3D G3DSA:3.90.180.10 22 334 1.8E-106 T 12-10-2018 PA257_1714 83db1c8e85b2b8c97aa4037572b3aaa3 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 2.5E-24 T 12-10-2018 PA257_1714 83db1c8e85b2b8c97aa4037572b3aaa3 337 SMART SM00829 16 334 1.3E-11 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_1714 83db1c8e85b2b8c97aa4037572b3aaa3 337 SUPERFAMILY SSF50129 9 137 1.0E-32 T 12-10-2018 IPR011032 GroES-like superfamily PA257_1714 83db1c8e85b2b8c97aa4037572b3aaa3 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 3.9E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_1714 83db1c8e85b2b8c97aa4037572b3aaa3 337 SUPERFAMILY SSF51735 117 287 8.97E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1714 83db1c8e85b2b8c97aa4037572b3aaa3 337 Gene3D G3DSA:3.40.50.720 128 273 1.8E-106 T 12-10-2018 PA257_1714 83db1c8e85b2b8c97aa4037572b3aaa3 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 1.4E-177 T 12-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 PA257_4139 b62df20cdb1e58e3d73818105713d546 369 SUPERFAMILY SSF52540 145 283 9.16E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4139 b62df20cdb1e58e3d73818105713d546 369 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 363 53.806 T 12-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 PA257_4139 b62df20cdb1e58e3d73818105713d546 369 SMART SM00450 2 133 7.9E-7 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_4139 b62df20cdb1e58e3d73818105713d546 369 SUPERFAMILY SSF52821 10 156 2.7E-18 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_4139 b62df20cdb1e58e3d73818105713d546 369 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 348 5.8E-106 T 12-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 PA257_4139 b62df20cdb1e58e3d73818105713d546 369 Gene3D G3DSA:3.40.250.10 2 133 7.8E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_4446 e8e1c7ef37af7a85c7bb683764af5a07 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.0E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4446 e8e1c7ef37af7a85c7bb683764af5a07 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.0E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4446 e8e1c7ef37af7a85c7bb683764af5a07 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.0E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4446 e8e1c7ef37af7a85c7bb683764af5a07 230 SMART SM00421 151 208 4.0E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4446 e8e1c7ef37af7a85c7bb683764af5a07 230 Pfam PF08448 PAS fold 28 130 7.0E-6 T 12-10-2018 IPR013656 PAS fold-4 PA257_4446 e8e1c7ef37af7a85c7bb683764af5a07 230 Gene3D G3DSA:1.10.10.10 137 213 2.8E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4446 e8e1c7ef37af7a85c7bb683764af5a07 230 SUPERFAMILY SSF46894 145 212 6.46E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_4446 e8e1c7ef37af7a85c7bb683764af5a07 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 198 2.5E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_6185 c9d9571520ea49129b1e2735f8edb666 237 SUPERFAMILY SSF46785 6 94 5.16E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6185 c9d9571520ea49129b1e2735f8edb666 237 Gene3D G3DSA:1.10.10.10 5 66 1.4E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6185 c9d9571520ea49129b1e2735f8edb666 237 Gene3D G3DSA:1.20.120.530 76 216 3.3E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_6185 c9d9571520ea49129b1e2735f8edb666 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 63 6.3E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_6185 c9d9571520ea49129b1e2735f8edb666 237 SMART SM00895 75 212 3.0E-22 T 12-10-2018 IPR011711 GntR, C-terminal PA257_6185 c9d9571520ea49129b1e2735f8edb666 237 Pfam PF07729 FCD domain 77 211 1.0E-17 T 12-10-2018 IPR011711 GntR, C-terminal PA257_6185 c9d9571520ea49129b1e2735f8edb666 237 SUPERFAMILY SSF48008 71 214 1.7E-17 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_6185 c9d9571520ea49129b1e2735f8edb666 237 SMART SM00345 8 65 3.3E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_3160 c4ca55526f4aea16be1cc82a1e55e2e5 136 Pfam PF08765 Mor transcription activator family 22 124 7.6E-15 T 12-10-2018 IPR014875 Mor transcription activator PA257_3160 c4ca55526f4aea16be1cc82a1e55e2e5 136 SUPERFAMILY SSF46689 2 123 1.49E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0515 c4ca55526f4aea16be1cc82a1e55e2e5 136 Pfam PF08765 Mor transcription activator family 22 124 7.6E-15 T 12-10-2018 IPR014875 Mor transcription activator PA257_0515 c4ca55526f4aea16be1cc82a1e55e2e5 136 SUPERFAMILY SSF46689 2 123 1.49E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1745 08daad4a2a51a44ea70b13e372592f47 360 Gene3D G3DSA:2.40.50.940 226 346 2.3E-7 T 12-10-2018 PA257_1745 08daad4a2a51a44ea70b13e372592f47 360 SUPERFAMILY SSF52540 7 242 6.69E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1745 08daad4a2a51a44ea70b13e372592f47 360 Pfam PF00005 ABC transporter 23 164 5.4E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1745 08daad4a2a51a44ea70b13e372592f47 360 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1745 08daad4a2a51a44ea70b13e372592f47 360 Gene3D G3DSA:2.40.50.140 283 337 2.3E-7 T 12-10-2018 PA257_1745 08daad4a2a51a44ea70b13e372592f47 360 SMART SM00382 31 213 1.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1745 08daad4a2a51a44ea70b13e372592f47 360 Gene3D G3DSA:3.40.50.300 3 225 1.6E-61 T 12-10-2018 PA257_1745 08daad4a2a51a44ea70b13e372592f47 360 Pfam PF08402 TOBE domain 276 345 1.8E-10 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PA257_1745 08daad4a2a51a44ea70b13e372592f47 360 SUPERFAMILY SSF50331 250 345 7.82E-12 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_6764 c6bab9b1952d31a54654f03d6638333a 438 SUPERFAMILY SSF103473 7 426 1.96E-60 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6764 c6bab9b1952d31a54654f03d6638333a 438 Gene3D G3DSA:1.20.1250.20 19 434 8.0E-57 T 12-10-2018 PA257_6764 c6bab9b1952d31a54654f03d6638333a 438 Pfam PF00083 Sugar (and other) transporter 27 237 2.2E-20 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PA257_4718 ba2eebbafed23a51cf8dbb3eb86f3c6e 97 Pfam PF05400 Flagellar protein FliT 18 93 5.3E-7 T 12-10-2018 IPR008622 Flagellar protein FliT PA257_0178 901207b68b5990cfe862639a0c73cc13 305 SUPERFAMILY SSF46785 5 116 4.17E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0178 901207b68b5990cfe862639a0c73cc13 305 Gene3D G3DSA:3.40.190.10 98 288 1.2E-37 T 12-10-2018 PA257_0178 901207b68b5990cfe862639a0c73cc13 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.3E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0178 901207b68b5990cfe862639a0c73cc13 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.3E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0178 901207b68b5990cfe862639a0c73cc13 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.3E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0178 901207b68b5990cfe862639a0c73cc13 305 Gene3D G3DSA:3.40.190.10 171 273 1.2E-37 T 12-10-2018 PA257_0178 901207b68b5990cfe862639a0c73cc13 305 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 6 302 4.3E-115 T 12-10-2018 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 PA257_0178 901207b68b5990cfe862639a0c73cc13 305 Gene3D G3DSA:1.10.10.10 2 89 1.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0178 901207b68b5990cfe862639a0c73cc13 305 SUPERFAMILY SSF53850 97 304 3.43E-33 T 12-10-2018 PA257_0178 901207b68b5990cfe862639a0c73cc13 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.6E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0178 901207b68b5990cfe862639a0c73cc13 305 Pfam PF03466 LysR substrate binding domain 95 301 1.0E-32 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2995 6c48fcc8b4571780d112da8d59878ad9 122 Gene3D G3DSA:2.60.120.430 2 122 3.3E-50 T 12-10-2018 PA257_2995 6c48fcc8b4571780d112da8d59878ad9 122 PIRSF PIRSF020485 1 122 3.3E-74 T 12-10-2018 IPR012905 PA-IL-like PA257_2995 6c48fcc8b4571780d112da8d59878ad9 122 SUPERFAMILY SSF49785 2 122 1.96E-64 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily PA257_2995 6c48fcc8b4571780d112da8d59878ad9 122 Pfam PF07828 PA-IL-like protein 2 122 1.3E-71 T 12-10-2018 IPR012905 PA-IL-like PA257_5214 f712cb6340afaa3d8c0834e12a75edc5 686 Pfam PF12696 TraM recognition site of TraD and TraG 467 594 8.0E-11 T 12-10-2018 IPR032689 TraD/TraG, TraM recognition site PA257_5214 f712cb6340afaa3d8c0834e12a75edc5 686 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 2 615 1.1E-251 T 12-10-2018 IPR022458 Conjugative coupling factor TraG/TraD PA257_5214 f712cb6340afaa3d8c0834e12a75edc5 686 SUPERFAMILY SSF52540 104 617 1.49E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5214 f712cb6340afaa3d8c0834e12a75edc5 686 Gene3D G3DSA:3.40.50.300 377 618 4.4E-27 T 12-10-2018 PA257_5214 f712cb6340afaa3d8c0834e12a75edc5 686 Gene3D G3DSA:3.40.50.300 114 290 5.4E-8 T 12-10-2018 PA257_5214 f712cb6340afaa3d8c0834e12a75edc5 686 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 1 615 0.0 T 12-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 PA257_1484 6630a4a54aa2c85a2da85a92753b3836 469 Pfam PF14821 Threonine synthase N terminus 2 80 2.3E-28 T 12-10-2018 IPR029144 Threonine synthase, N-terminal PA257_1484 6630a4a54aa2c85a2da85a92753b3836 469 Gene3D G3DSA:3.40.50.1100 108 444 1.4E-151 T 12-10-2018 PA257_1484 6630a4a54aa2c85a2da85a92753b3836 469 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PA257_1484 6630a4a54aa2c85a2da85a92753b3836 469 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 398 1.1E-24 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_1484 6630a4a54aa2c85a2da85a92753b3836 469 SUPERFAMILY SSF53686 1 461 5.24E-165 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_1484 6630a4a54aa2c85a2da85a92753b3836 469 Gene3D G3DSA:3.90.1380.10 1 86 1.6E-30 T 12-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily PA257_1484 6630a4a54aa2c85a2da85a92753b3836 469 Gene3D G3DSA:3.40.50.1100 96 431 1.4E-151 T 12-10-2018 PA257_1484 6630a4a54aa2c85a2da85a92753b3836 469 TIGRFAM TIGR00260 thrC: threonine synthase 67 423 4.0E-80 T 12-10-2018 IPR004450 Threonine synthase-like PA257_0050 5af7ad164d942165606df112f3c6cdaf 562 Gene3D G3DSA:3.10.20.310 58 146 2.4E-18 T 12-10-2018 PA257_0050 5af7ad164d942165606df112f3c6cdaf 562 Pfam PF08479 POTRA domain, ShlB-type 71 146 1.2E-27 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type PA257_0050 5af7ad164d942165606df112f3c6cdaf 562 Pfam PF17287 POTRA domain 158 200 4.1E-15 T 12-10-2018 IPR035251 ShlB, POTRA domain PA257_0050 5af7ad164d942165606df112f3c6cdaf 562 PIRSF PIRSF029745 2 562 1.3E-152 T 12-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 PA257_0050 5af7ad164d942165606df112f3c6cdaf 562 Gene3D G3DSA:2.40.160.50 178 562 1.7E-86 T 12-10-2018 PA257_0050 5af7ad164d942165606df112f3c6cdaf 562 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 205 525 2.0E-97 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal PA257_5585 9fb2514be901aeaad2a031bb4cebf81b 766 Gene3D G3DSA:2.170.130.10 62 190 9.8E-46 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_5585 9fb2514be901aeaad2a031bb4cebf81b 766 SUPERFAMILY SSF56935 75 766 9.62E-129 T 12-10-2018 PA257_5585 9fb2514be901aeaad2a031bb4cebf81b 766 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 749 766 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_5585 9fb2514be901aeaad2a031bb4cebf81b 766 Pfam PF07715 TonB-dependent Receptor Plug Domain 81 178 6.6E-20 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_5585 9fb2514be901aeaad2a031bb4cebf81b 766 Pfam PF00593 TonB dependent receptor 283 764 6.6E-60 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_5585 9fb2514be901aeaad2a031bb4cebf81b 766 Gene3D G3DSA:2.40.170.20 193 766 2.8E-150 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_5585 9fb2514be901aeaad2a031bb4cebf81b 766 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 82 766 9.0E-87 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_4621 6df8d751fcefa4784d19a5706decc27f 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 78 8.2E-17 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_4621 6df8d751fcefa4784d19a5706decc27f 209 Gene3D G3DSA:3.40.30.10 2 203 1.8E-74 T 12-10-2018 PA257_4621 6df8d751fcefa4784d19a5706decc27f 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 128 194 6.0E-12 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_4621 6df8d751fcefa4784d19a5706decc27f 209 SUPERFAMILY SSF47616 75 199 2.32E-32 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_4621 6df8d751fcefa4784d19a5706decc27f 209 Gene3D G3DSA:1.20.1050.10 85 193 1.8E-74 T 12-10-2018 PA257_4621 6df8d751fcefa4784d19a5706decc27f 209 SUPERFAMILY SSF52833 3 84 4.84E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_3793 90fb66bf95e07bfee01a24346a3ace1f 334 Gene3D G3DSA:3.40.50.2300 53 304 3.7E-87 T 12-10-2018 PA257_3793 90fb66bf95e07bfee01a24346a3ace1f 334 SUPERFAMILY SSF47413 1 56 7.67E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_3793 90fb66bf95e07bfee01a24346a3ace1f 334 Gene3D G3DSA:1.10.260.40 1 52 9.2E-21 T 12-10-2018 PA257_3793 90fb66bf95e07bfee01a24346a3ace1f 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 12-10-2018 PA257_3793 90fb66bf95e07bfee01a24346a3ace1f 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 9.6E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PA257_3793 90fb66bf95e07bfee01a24346a3ace1f 334 SUPERFAMILY SSF53822 58 330 7.24E-90 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_3793 90fb66bf95e07bfee01a24346a3ace1f 334 Pfam PF13377 Periplasmic binding protein-like domain 165 327 1.2E-41 T 12-10-2018 PA257_3793 90fb66bf95e07bfee01a24346a3ace1f 334 Gene3D G3DSA:3.40.50.2300 157 287 3.7E-87 T 12-10-2018 PA257_3793 90fb66bf95e07bfee01a24346a3ace1f 334 SMART SM00354 1 68 4.6E-27 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PA257_4536 17741aa546ced5d0c99bfc1216a6d9d3 287 SUPERFAMILY SSF47413 46 94 2.48E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_4536 17741aa546ced5d0c99bfc1216a6d9d3 287 Pfam PF13560 Helix-turn-helix domain 22 101 1.1E-14 T 12-10-2018 PA257_4536 17741aa546ced5d0c99bfc1216a6d9d3 287 SMART SM00530 26 98 6.9E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_4536 17741aa546ced5d0c99bfc1216a6d9d3 287 Gene3D G3DSA:3.30.450.180 121 287 8.6E-12 T 12-10-2018 PA257_3986 080933d275254501dd4f19ee9973ff73 231 Pfam PF08787 Alginate lyase 2 230 2.9E-61 T 12-10-2018 IPR014895 Alginate lyase 2 PA257_3986 080933d275254501dd4f19ee9973ff73 231 Gene3D G3DSA:2.60.120.200 2 231 2.1E-63 T 12-10-2018 PA257_3986 080933d275254501dd4f19ee9973ff73 231 SUPERFAMILY SSF49899 2 230 6.86E-74 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PA257_1665 c6038ae8eff90cfc980fcec93f76d070 256 SUPERFAMILY SSF161098 3 249 1.12E-55 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1665 c6038ae8eff90cfc980fcec93f76d070 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 245 7.7E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_1665 c6038ae8eff90cfc980fcec93f76d070 256 Gene3D G3DSA:1.10.3720.10 3 251 1.2E-49 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5857 29af7094614adaee45e8b885f9b772cd 294 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 110 125 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 PA257_5857 29af7094614adaee45e8b885f9b772cd 294 SMART SM01400 1 102 3.2E-58 T 12-10-2018 PA257_5857 29af7094614adaee45e8b885f9b772cd 294 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 3 294 1.5E-118 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PA257_5857 29af7094614adaee45e8b885f9b772cd 294 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 2 102 3.2E-42 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PA257_5857 29af7094614adaee45e8b885f9b772cd 294 Gene3D G3DSA:3.40.50.2020 129 270 4.2E-124 T 12-10-2018 PA257_5857 29af7094614adaee45e8b885f9b772cd 294 SUPERFAMILY SSF53271 50 286 4.88E-64 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like PA257_5857 29af7094614adaee45e8b885f9b772cd 294 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 294 43.989 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 PA257_5857 29af7094614adaee45e8b885f9b772cd 294 Gene3D G3DSA:3.40.50.2020 2 282 4.2E-124 T 12-10-2018 PA257_5857 29af7094614adaee45e8b885f9b772cd 294 Pfam PF14572 Phosphoribosyl synthetase-associated domain 183 294 1.9E-32 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PA257_2546 a6808294e1b800aab2fdbbf1e4471570 339 SUPERFAMILY SSF51735 119 282 1.7E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2546 a6808294e1b800aab2fdbbf1e4471570 339 SMART SM00829 15 335 3.4E-11 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_2546 a6808294e1b800aab2fdbbf1e4471570 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 94 6.5E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_2546 a6808294e1b800aab2fdbbf1e4471570 339 Pfam PF13602 Zinc-binding dehydrogenase 195 335 2.8E-14 T 12-10-2018 PA257_2546 a6808294e1b800aab2fdbbf1e4471570 339 Gene3D G3DSA:3.40.50.720 129 274 1.5E-112 T 12-10-2018 PA257_2546 a6808294e1b800aab2fdbbf1e4471570 339 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 338 1.4E-156 T 12-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 PA257_2546 a6808294e1b800aab2fdbbf1e4471570 339 Gene3D G3DSA:3.90.180.10 22 335 1.5E-112 T 12-10-2018 PA257_2546 a6808294e1b800aab2fdbbf1e4471570 339 SUPERFAMILY SSF50129 2 143 6.24E-32 T 12-10-2018 IPR011032 GroES-like superfamily PA257_2330 efca1fcab08f17c163428cb281547324 318 SUPERFAMILY SSF55120 91 317 3.68E-59 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2330 efca1fcab08f17c163428cb281547324 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2330 efca1fcab08f17c163428cb281547324 318 SUPERFAMILY SSF55174 22 73 3.34E-8 T 12-10-2018 PA257_2330 efca1fcab08f17c163428cb281547324 318 SMART SM00363 23 82 4.4E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_2330 efca1fcab08f17c163428cb281547324 318 Pfam PF00849 RNA pseudouridylate synthase 104 253 5.6E-31 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2330 efca1fcab08f17c163428cb281547324 318 Pfam PF01479 S4 domain 23 69 3.1E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_2330 efca1fcab08f17c163428cb281547324 318 Gene3D G3DSA:3.30.2350.10 95 318 8.9E-75 T 12-10-2018 PA257_2330 efca1fcab08f17c163428cb281547324 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 316 6.9E-78 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2330 efca1fcab08f17c163428cb281547324 318 Gene3D G3DSA:3.10.290.10 13 75 1.1E-14 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PA257_1647 5adeec9be7b17861f8aa0a22579e10e4 350 SUPERFAMILY SSF69279 5 173 1.7E-30 T 12-10-2018 PA257_1647 5adeec9be7b17861f8aa0a22579e10e4 350 Pfam PF05954 Phage late control gene D protein (GPD) 36 311 8.1E-19 T 12-10-2018 PA257_3606 423df69b00916ee003ad1a83aa849713 170 Gene3D G3DSA:3.40.630.30 11 151 3.9E-8 T 12-10-2018 PA257_3606 423df69b00916ee003ad1a83aa849713 170 SUPERFAMILY SSF55729 34 137 7.39E-10 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6909 f2ea7270588ac8b0e7ec5e45a09bed43 443 Gene3D G3DSA:3.10.20.70 1 101 6.6E-44 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_6909 f2ea7270588ac8b0e7ec5e45a09bed43 443 Pfam PF00120 Glutamine synthetase, catalytic domain 106 426 2.5E-87 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_6909 f2ea7270588ac8b0e7ec5e45a09bed43 443 SMART SM01230 105 353 5.5E-66 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_6909 f2ea7270588ac8b0e7ec5e45a09bed43 443 SUPERFAMILY SSF55931 105 440 2.94E-80 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_6909 f2ea7270588ac8b0e7ec5e45a09bed43 443 Pfam PF16952 Glutamine synthetase N-terminal domain 3 104 1.3E-44 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PA257_6909 f2ea7270588ac8b0e7ec5e45a09bed43 443 Gene3D G3DSA:3.30.590.10 102 443 2.5E-127 T 12-10-2018 PA257_1093 ed2c72d0749cd0d2df5cad1c90345760 142 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 135 4.8E-64 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PA257_1093 ed2c72d0749cd0d2df5cad1c90345760 142 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 141 81.792 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PA257_1093 ed2c72d0749cd0d2df5cad1c90345760 142 Pfam PF03477 ATP cone domain 40 124 9.0E-14 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 PA257_6066 f8df4451a5130527f7870e09e5d0d801 160 SUPERFAMILY SSF55729 1 158 5.66E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6066 f8df4451a5130527f7870e09e5d0d801 160 Pfam PF00583 Acetyltransferase (GNAT) family 36 133 1.4E-11 T 12-10-2018 IPR000182 GNAT domain PA257_6066 f8df4451a5130527f7870e09e5d0d801 160 Gene3D G3DSA:3.40.630.30 1 160 4.6E-45 T 12-10-2018 PA257_6187 116bdb8684e8c6e2f66ea015fb699d5f 310 Gene3D G3DSA:3.30.1780.10 8 309 1.6E-83 T 12-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 PA257_6187 116bdb8684e8c6e2f66ea015fb699d5f 310 SUPERFAMILY SSF51735 2 309 1.9E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6187 116bdb8684e8c6e2f66ea015fb699d5f 310 PIRSF PIRSF001439 3 310 9.3E-72 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 PA257_6187 116bdb8684e8c6e2f66ea015fb699d5f 310 Gene3D G3DSA:3.40.50.720 121 293 1.6E-83 T 12-10-2018 PA257_6187 116bdb8684e8c6e2f66ea015fb699d5f 310 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 48 309 7.7E-61 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 PA257_2917 0603bd0c7e77b4f31eac8a17df317b83 225 SUPERFAMILY SSF56770 44 190 6.54E-64 T 12-10-2018 PA257_2917 0603bd0c7e77b4f31eac8a17df317b83 225 Gene3D G3DSA:3.40.50.12280 25 193 2.2E-69 T 12-10-2018 PA257_2917 0603bd0c7e77b4f31eac8a17df317b83 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 182 42.636 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2917 0603bd0c7e77b4f31eac8a17df317b83 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 47 183 5.6E-68 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2917 0603bd0c7e77b4f31eac8a17df317b83 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 88 175 1.1E-21 T 12-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2917 0603bd0c7e77b4f31eac8a17df317b83 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_5961 5ee64c2c3e08d22c2eb9b9754d891288 152 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.6E-20 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal PA257_5961 5ee64c2c3e08d22c2eb9b9754d891288 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 25.859 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 PA257_5961 5ee64c2c3e08d22c2eb9b9754d891288 152 SUPERFAMILY SSF75420 3 83 4.18E-27 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily PA257_5961 5ee64c2c3e08d22c2eb9b9754d891288 152 Gene3D G3DSA:3.30.300.70 1 80 3.4E-28 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily PA257_5961 5ee64c2c3e08d22c2eb9b9754d891288 152 SUPERFAMILY SSF74942 84 151 1.02E-17 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily PA257_5961 5ee64c2c3e08d22c2eb9b9754d891288 152 Pfam PF02576 RimP N-terminal domain 11 83 1.8E-31 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal PA257_5482 68fa3879119b1156c358e505e8e16484 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 4.4E-5 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5482 68fa3879119b1156c358e505e8e16484 360 Pfam PF00953 Glycosyl transferase family 4 99 284 9.7E-37 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 PA257_5482 68fa3879119b1156c358e505e8e16484 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5482 68fa3879119b1156c358e505e8e16484 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5482 68fa3879119b1156c358e505e8e16484 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.9E-141 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5482 68fa3879119b1156c358e505e8e16484 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.643 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_6774 5e0eb206c11c55b7000149bf29b48664 458 Pfam PF03315 Serine dehydratase beta chain 4 154 9.2E-55 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 PA257_6774 5e0eb206c11c55b7000149bf29b48664 458 Pfam PF03313 Serine dehydratase alpha chain 186 452 2.1E-103 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit PA257_6774 5e0eb206c11c55b7000149bf29b48664 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 454 3.7E-210 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 PA257_6774 5e0eb206c11c55b7000149bf29b48664 458 Gene3D G3DSA:3.30.1330.90 11 158 3.2E-51 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 PA257_6774 5e0eb206c11c55b7000149bf29b48664 458 SUPERFAMILY SSF143548 17 154 6.8E-45 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 Pfam PF00106 short chain dehydrogenase 5 188 2.8E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 Gene3D G3DSA:3.40.50.720 4 277 8.8E-78 T 12-10-2018 PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 SUPERFAMILY SSF51735 5 245 7.35E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 7.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 7.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 7.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 7.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4417 e10def5f541a0d0ac2ca00ac9be78075 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 Gene3D G3DSA:3.40.309.10 816 1007 1.2E-155 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 Gene3D G3DSA:3.40.605.10 565 1039 1.2E-155 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 SUPERFAMILY SSF51730 190 540 5.89E-114 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 PIRSF PIRSF000197 4 1057 0.0 T 12-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 533 1037 5.5E-212 T 12-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 Pfam PF00171 Aldehyde dehydrogenase family 583 1037 2.2E-115 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 Gene3D G3DSA:3.20.20.220 147 532 2.6E-136 T 12-10-2018 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 841 852 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 Pfam PF01619 Proline dehydrogenase 197 496 3.1E-95 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 SUPERFAMILY SSF81935 19 189 1.83E-62 T 12-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 74 187 2.2E-45 T 12-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 PA257_5126 45457498bfd0fdc3c788a8ac0841e8f1 1060 SUPERFAMILY SSF53720 553 1042 1.2E-127 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_2435 19b616e5f700db85a315d1e41ab27784 305 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 1.0E-61 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PA257_2435 19b616e5f700db85a315d1e41ab27784 305 Gene3D G3DSA:1.10.8.300 196 301 4.9E-26 T 12-10-2018 PA257_2435 19b616e5f700db85a315d1e41ab27784 305 Gene3D G3DSA:3.40.50.300 2 194 2.9E-44 T 12-10-2018 PA257_2435 19b616e5f700db85a315d1e41ab27784 305 PIRSF PIRSF002849 1 304 2.1E-119 T 12-10-2018 PA257_2435 19b616e5f700db85a315d1e41ab27784 305 SUPERFAMILY SSF52540 8 282 4.31E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4698 15cb0d1d60759d21eaf6af5bc37a48f3 588 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4698 15cb0d1d60759d21eaf6af5bc37a48f3 588 SUPERFAMILY SSF52540 338 583 3.73E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4698 15cb0d1d60759d21eaf6af5bc37a48f3 588 Gene3D G3DSA:3.40.50.300 336 585 5.6E-89 T 12-10-2018 PA257_4698 15cb0d1d60759d21eaf6af5bc37a48f3 588 SMART SM00382 372 544 1.1E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4698 15cb0d1d60759d21eaf6af5bc37a48f3 588 SUPERFAMILY SSF90123 16 323 5.62E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_4698 15cb0d1d60759d21eaf6af5bc37a48f3 588 Pfam PF00005 ABC transporter 364 512 9.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4698 15cb0d1d60759d21eaf6af5bc37a48f3 588 Pfam PF00664 ABC transporter transmembrane region 30 297 1.1E-50 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PA257_4698 15cb0d1d60759d21eaf6af5bc37a48f3 588 Gene3D G3DSA:1.20.1560.10 10 332 3.8E-80 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_4698 15cb0d1d60759d21eaf6af5bc37a48f3 588 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 9 583 3.4E-285 T 12-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein PA257_4182 bb1310fd559079c202de923297d1f4f6 433 Gene3D G3DSA:1.10.760.10 173 302 1.7E-8 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4182 bb1310fd559079c202de923297d1f4f6 433 Gene3D G3DSA:1.10.760.10 1 155 3.5E-10 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4182 bb1310fd559079c202de923297d1f4f6 433 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 327 407 9.1E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4182 bb1310fd559079c202de923297d1f4f6 433 PIRSF PIRSF000018 14 433 9.9E-138 T 12-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 PA257_4182 bb1310fd559079c202de923297d1f4f6 433 SUPERFAMILY SSF46626 38 168 8.77E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4182 bb1310fd559079c202de923297d1f4f6 433 Pfam PF00034 Cytochrome c 47 146 1.4E-5 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4182 bb1310fd559079c202de923297d1f4f6 433 Gene3D G3DSA:1.10.760.10 315 433 1.1E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4182 bb1310fd559079c202de923297d1f4f6 433 SUPERFAMILY SSF46626 190 296 1.43E-14 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4182 bb1310fd559079c202de923297d1f4f6 433 SUPERFAMILY SSF46626 327 419 2.91E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_1094 0bd327fd27e1cd8954791f10eebaf4bf 373 Gene3D G3DSA:3.40.430.10 143 371 1.8E-67 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PA257_1094 0bd327fd27e1cd8954791f10eebaf4bf 373 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 90 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PA257_1094 0bd327fd27e1cd8954791f10eebaf4bf 373 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 101 1.2E-19 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain PA257_1094 0bd327fd27e1cd8954791f10eebaf4bf 373 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 9 364 3.2E-116 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 PA257_1094 0bd327fd27e1cd8954791f10eebaf4bf 373 Gene3D G3DSA:3.40.140.10 1 142 6.6E-46 T 12-10-2018 PA257_1094 0bd327fd27e1cd8954791f10eebaf4bf 373 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 148 367 1.3E-53 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 PA257_1094 0bd327fd27e1cd8954791f10eebaf4bf 373 SUPERFAMILY SSF53597 147 365 1.11E-55 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PA257_1094 0bd327fd27e1cd8954791f10eebaf4bf 373 PIRSF PIRSF006769 1 370 5.9E-128 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 PA257_1094 0bd327fd27e1cd8954791f10eebaf4bf 373 SUPERFAMILY SSF53927 5 146 8.87E-49 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PA257_1094 0bd327fd27e1cd8954791f10eebaf4bf 373 Pfam PF01872 RibD C-terminal domain 149 363 3.0E-47 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PA257_3340 7af93b6ffa0269a3a71fe68460e86eb5 362 SUPERFAMILY SSF51197 25 336 4.21E-82 T 12-10-2018 PA257_3340 7af93b6ffa0269a3a71fe68460e86eb5 362 Gene3D G3DSA:3.60.130.10 23 338 9.5E-99 T 12-10-2018 PA257_3340 7af93b6ffa0269a3a71fe68460e86eb5 362 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 39 334 7.0E-50 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 PA257_6243 8ee53f7349b8bd8c8b5f42d57904e7fb 404 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 177 395 1.0E-79 T 12-10-2018 PA257_6243 8ee53f7349b8bd8c8b5f42d57904e7fb 404 Gene3D G3DSA:3.30.70.260 2 83 1.4E-14 T 12-10-2018 PA257_6243 8ee53f7349b8bd8c8b5f42d57904e7fb 404 Pfam PF13740 ACT domain 3 79 2.2E-26 T 12-10-2018 PA257_6243 8ee53f7349b8bd8c8b5f42d57904e7fb 404 Gene3D G3DSA:3.40.50.1000 106 396 3.1E-85 T 12-10-2018 IPR023214 HAD superfamily PA257_6243 8ee53f7349b8bd8c8b5f42d57904e7fb 404 SUPERFAMILY SSF56784 191 397 2.13E-52 T 12-10-2018 IPR036412 HAD-like superfamily PA257_6243 8ee53f7349b8bd8c8b5f42d57904e7fb 404 Pfam PF12710 haloacid dehalogenase-like hydrolase 193 360 3.1E-25 T 12-10-2018 PA257_6243 8ee53f7349b8bd8c8b5f42d57904e7fb 404 SUPERFAMILY SSF55021 3 83 1.72E-14 T 12-10-2018 PA257_6243 8ee53f7349b8bd8c8b5f42d57904e7fb 404 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 192 362 1.3E-33 T 12-10-2018 PA257_2272 094fb52c4eaa843f04ada84da052f0d6 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 1.7E-33 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_2272 094fb52c4eaa843f04ada84da052f0d6 179 Gene3D G3DSA:3.40.980.10 2 173 3.2E-49 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily PA257_2272 094fb52c4eaa843f04ada84da052f0d6 179 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 9 170 4.1E-86 T 12-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 PA257_2272 094fb52c4eaa843f04ada84da052f0d6 179 Pfam PF00994 Probable molybdopterin binding domain 15 157 4.7E-34 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_2272 094fb52c4eaa843f04ada84da052f0d6 179 SMART SM00852 15 159 6.2E-33 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_2272 094fb52c4eaa843f04ada84da052f0d6 179 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 73 86 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 PA257_2272 094fb52c4eaa843f04ada84da052f0d6 179 PIRSF PIRSF006443 1 167 5.2E-66 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 PA257_2272 094fb52c4eaa843f04ada84da052f0d6 179 SUPERFAMILY SSF53218 8 169 2.09E-47 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily PA257_2195 0065ebbf9a5e927cd064aebd147a12b1 142 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 3.6E-20 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PA257_2195 0065ebbf9a5e927cd064aebd147a12b1 142 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 3.6E-20 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PA257_2195 0065ebbf9a5e927cd064aebd147a12b1 142 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 141 3.4E-66 T 12-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 PA257_2195 0065ebbf9a5e927cd064aebd147a12b1 142 SUPERFAMILY SSF54523 35 141 1.46E-39 T 12-10-2018 PA257_2195 0065ebbf9a5e927cd064aebd147a12b1 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 7.7E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2195 0065ebbf9a5e927cd064aebd147a12b1 142 Pfam PF08334 Type II secretion system (T2SS), protein G 31 140 6.3E-44 T 12-10-2018 IPR013545 Type II secretion system protein G PA257_2195 0065ebbf9a5e927cd064aebd147a12b1 142 Gene3D G3DSA:3.30.700.10 33 140 1.2E-45 T 12-10-2018 PA257_2195 0065ebbf9a5e927cd064aebd147a12b1 142 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 5.7E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2195 0065ebbf9a5e927cd064aebd147a12b1 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 14 559 2.1E-284 T 12-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 Pfam PF16657 Maltogenic Amylase, C-terminal domain 475 556 2.4E-27 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 SMART SM00642 23 427 7.6E-103 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 Gene3D G3DSA:3.90.400.10 113 183 2.0E-217 T 12-10-2018 PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 Gene3D G3DSA:3.90.1200.10 808 1099 1.8E-57 T 12-10-2018 PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 Gene3D G3DSA:3.20.20.80 14 469 2.0E-217 T 12-10-2018 PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 SUPERFAMILY SSF56112 722 1047 5.92E-16 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 SUPERFAMILY SSF51445 12 472 2.11E-129 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 576 1090 2.5E-162 T 12-10-2018 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 SUPERFAMILY SSF51011 477 558 2.72E-17 T 12-10-2018 PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 Gene3D G3DSA:2.60.40.1180 475 569 8.3E-36 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta PA257_3575 8ae6f88b98195812c71a31672fa4e98a 1100 Pfam PF00128 Alpha amylase, catalytic domain 38 396 3.1E-69 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3532 2d90bacce4808048906c03ad55a12db4 345 SMART SM00829 22 339 1.4E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_3532 2d90bacce4808048906c03ad55a12db4 345 SUPERFAMILY SSF51735 127 305 4.62E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3532 2d90bacce4808048906c03ad55a12db4 345 Pfam PF00107 Zinc-binding dehydrogenase 161 300 5.7E-18 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_3532 2d90bacce4808048906c03ad55a12db4 345 SUPERFAMILY SSF50129 7 147 9.6E-48 T 12-10-2018 IPR011032 GroES-like superfamily PA257_3532 2d90bacce4808048906c03ad55a12db4 345 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 3.9E-43 T 12-10-2018 PA257_3532 2d90bacce4808048906c03ad55a12db4 345 Gene3D G3DSA:3.90.180.10 19 339 8.5E-128 T 12-10-2018 PA257_3532 2d90bacce4808048906c03ad55a12db4 345 Gene3D G3DSA:3.40.50.720 130 311 8.5E-128 T 12-10-2018 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Gene3D G3DSA:3.50.50.60 295 422 2.2E-84 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 2 1004 0.0 T 12-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 4.5E-8 T 12-10-2018 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 192 4.5E-8 T 12-10-2018 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Gene3D G3DSA:3.50.50.60 172 592 2.2E-84 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Pfam PF01571 Aminomethyltransferase folate-binding domain 619 884 2.6E-75 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 SUPERFAMILY SSF51905 167 455 1.73E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 SUPERFAMILY SSF103025 613 895 1.4E-92 T 12-10-2018 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 102 6.3E-23 T 12-10-2018 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Gene3D G3DSA:3.30.70.1400 672 895 2.2E-87 T 12-10-2018 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Gene3D G3DSA:3.10.20.440 12 108 9.9E-7 T 12-10-2018 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 907 990 4.5E-11 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 284 292 2.8E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 459 477 2.8E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 172 194 2.8E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 PIRSF PIRSF037980 1 1004 0.0 T 12-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 SUPERFAMILY SSF101790 906 1003 1.16E-17 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Gene3D G3DSA:1.10.10.1100 508 587 2.2E-84 T 12-10-2018 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 172 434 2.3E-12 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Gene3D G3DSA:3.30.1360.120 614 873 2.2E-87 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PA257_6813 3c33694ab565f8b0f98af5f7b614fdfa 1005 Gene3D G3DSA:2.40.30.110 909 1003 2.7E-7 T 12-10-2018 PA257_4218 7d20b397a898b8b9488925d1860e2370 117 Gene3D G3DSA:3.30.1330.40 2 116 2.6E-35 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_4218 7d20b397a898b8b9488925d1860e2370 117 SUPERFAMILY SSF55298 14 116 9.42E-30 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_4218 7d20b397a898b8b9488925d1860e2370 117 Pfam PF01042 Endoribonuclease L-PSP 17 114 1.5E-21 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PA257_1228 b286f54d9611c128e9b36384236c1e65 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 1.6E-48 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PA257_1228 b286f54d9611c128e9b36384236c1e65 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 1.0E-103 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PA257_1228 b286f54d9611c128e9b36384236c1e65 335 PIRSF PIRSF000267 2 335 3.2E-96 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PA257_4702 1944b64a0778fe84b9f81dbc9c2fa18a 382 SUPERFAMILY SSF50952 37 379 1.11E-44 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 PA257_4702 1944b64a0778fe84b9f81dbc9c2fa18a 382 Gene3D G3DSA:2.120.10.30 31 379 3.6E-131 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PA257_4702 1944b64a0778fe84b9f81dbc9c2fa18a 382 Pfam PF07995 Glucose / Sorbosone dehydrogenase 46 377 3.3E-137 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase PA257_6398 0f95ed7040b829ec4ec839b217c57b21 189 ProSitePatterns PS00213 Lipocalin signature. 35 46 - T 12-10-2018 IPR022272 Lipocalin family conserved site PA257_6398 0f95ed7040b829ec4ec839b217c57b21 189 Gene3D G3DSA:2.40.128.20 18 180 4.8E-47 T 12-10-2018 IPR012674 Calycin PA257_6398 0f95ed7040b829ec4ec839b217c57b21 189 Pfam PF08212 Lipocalin-like domain 34 179 6.4E-62 T 12-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain PA257_6398 0f95ed7040b829ec4ec839b217c57b21 189 PIRSF PIRSF036893 4 189 1.0E-55 T 12-10-2018 IPR022271 Lipocalin, ApoD type PA257_6398 0f95ed7040b829ec4ec839b217c57b21 189 SUPERFAMILY SSF50814 18 183 4.99E-46 T 12-10-2018 IPR012674 Calycin PA257_6398 0f95ed7040b829ec4ec839b217c57b21 189 PRINTS PR01171 Bacterial lipocalin signature 170 180 2.1E-10 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 PA257_6398 0f95ed7040b829ec4ec839b217c57b21 189 PRINTS PR01171 Bacterial lipocalin signature 143 154 2.1E-10 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 PA257_6398 0f95ed7040b829ec4ec839b217c57b21 189 PRINTS PR01171 Bacterial lipocalin signature 51 67 2.1E-10 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 PA257_6398 0f95ed7040b829ec4ec839b217c57b21 189 PRINTS PR01171 Bacterial lipocalin signature 34 48 2.1E-10 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 SUPERFAMILY SSF46785 12 89 5.66E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 SMART SM00866 98 235 3.8E-27 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 Gene3D G3DSA:3.40.1410.10 86 239 9.3E-36 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 Gene3D G3DSA:1.10.10.10 9 82 2.8E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 SMART SM00345 20 77 5.1E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 Pfam PF07702 UTRA domain 98 235 2.0E-31 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 SUPERFAMILY SSF64288 65 238 2.83E-39 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.7E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.7E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 2.7E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_1892 af4cced49937f82f6aa836e7b4f0b3fb 240 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 16 238 1.3E-50 T 12-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF PA257_0428 98d8e89520705828b04daddd9a3ac07f 398 Gene3D G3DSA:2.30.130.10 5 75 3.6E-14 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 PA257_0428 98d8e89520705828b04daddd9a3ac07f 398 Gene3D G3DSA:3.30.750.80 79 181 1.1E-29 T 12-10-2018 PA257_0428 98d8e89520705828b04daddd9a3ac07f 398 Gene3D G3DSA:3.40.50.150 183 395 2.8E-68 T 12-10-2018 PA257_0428 98d8e89520705828b04daddd9a3ac07f 398 SUPERFAMILY SSF53335 85 391 9.6E-73 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0428 98d8e89520705828b04daddd9a3ac07f 398 SUPERFAMILY SSF88697 4 75 3.73E-9 T 12-10-2018 IPR015947 PUA-like superfamily PA257_0428 98d8e89520705828b04daddd9a3ac07f 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 171 344 7.7E-19 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PA257_4956 73c909924871aaac24fb4ce6acdc0411 229 SUPERFAMILY SSF161098 9 206 5.76E-39 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4956 73c909924871aaac24fb4ce6acdc0411 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 6.8E-20 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_4956 73c909924871aaac24fb4ce6acdc0411 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 2.3E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_4956 73c909924871aaac24fb4ce6acdc0411 229 Gene3D G3DSA:1.10.3720.10 1 223 3.8E-49 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0677 41cc1c5bd21703421d49b55af45149ff 429 SUPERFAMILY SSF51905 33 335 8.1E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0677 41cc1c5bd21703421d49b55af45149ff 429 Gene3D G3DSA:3.30.9.10 126 349 3.1E-64 T 12-10-2018 PA257_0677 41cc1c5bd21703421d49b55af45149ff 429 Gene3D G3DSA:3.50.50.60 35 386 3.1E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0677 41cc1c5bd21703421d49b55af45149ff 429 Pfam PF01266 FAD dependent oxidoreductase 35 385 3.1E-53 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_5342 37cb3a89cac9e15dce3650f655ec8857 409 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 284 378 2.6E-16 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain PA257_5342 37cb3a89cac9e15dce3650f655ec8857 409 Gene3D G3DSA:3.60.21.10 1 280 5.9E-80 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like PA257_5342 37cb3a89cac9e15dce3650f655ec8857 409 SUPERFAMILY SSF56300 1 345 3.36E-56 T 12-10-2018 PA257_5342 37cb3a89cac9e15dce3650f655ec8857 409 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 257 4.6E-54 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 PA257_5342 37cb3a89cac9e15dce3650f655ec8857 409 Pfam PF00149 Calcineurin-like phosphoesterase 1 231 3.8E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PA257_4077 37e9747c6fb11f12f2ac4c3f51ae9748 429 SUPERFAMILY SSF52540 85 354 1.81E-97 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4077 37e9747c6fb11f12f2ac4c3f51ae9748 429 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 11 427 5.6E-201 T 12-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_4077 37e9747c6fb11f12f2ac4c3f51ae9748 429 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 17 82 2.2E-10 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_4077 37e9747c6fb11f12f2ac4c3f51ae9748 429 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_4077 37e9747c6fb11f12f2ac4c3f51ae9748 429 Gene3D G3DSA:3.40.50.12240 8 429 1.9E-152 T 12-10-2018 PA257_4077 37e9747c6fb11f12f2ac4c3f51ae9748 429 SMART SM00382 151 332 3.3E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4077 37e9747c6fb11f12f2ac4c3f51ae9748 429 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 10 427 7.3E-172 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_4077 37e9747c6fb11f12f2ac4c3f51ae9748 429 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 139 348 3.1E-78 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 SUPERFAMILY SSF69279 10 184 4.82E-57 T 12-10-2018 PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 SUPERFAMILY SSF69349 444 626 1.88E-37 T 12-10-2018 PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 SUPERFAMILY SSF69279 184 366 2.72E-45 T 12-10-2018 PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 SUPERFAMILY SSF69255 366 454 2.46E-34 T 12-10-2018 PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 Pfam PF05954 Phage late control gene D protein (GPD) 29 322 2.2E-79 T 12-10-2018 PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 Gene3D G3DSA:2.30.110.50 20 323 1.1E-88 T 12-10-2018 PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 Gene3D G3DSA:2.40.50.230 357 458 1.2E-43 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 Gene3D G3DSA:3.55.50.10 95 188 1.1E-88 T 12-10-2018 PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 2.3E-125 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 5.0E-205 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_6621 3464d5a00eabd594b4edb5e6a3811bd1 691 Gene3D G3DSA:3.30.1920.30 220 279 1.1E-88 T 12-10-2018 PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 SUPERFAMILY SSF52540 30 437 3.49E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 837 0.0 T 12-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 Pfam PF00270 DEAD/DEAH box helicase 19 165 5.2E-7 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 Gene3D G3DSA:3.40.50.300 183 352 7.6E-56 T 12-10-2018 PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 SMART SM00847 393 496 5.5E-17 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 Pfam PF00271 Helicase conserved C-terminal domain 210 333 2.1E-14 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 Pfam PF04408 Helicase associated domain (HA2) 394 454 8.8E-12 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 SMART SM00490 230 334 6.5E-19 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 Gene3D G3DSA:1.20.120.1080 377 469 1.4E-10 T 12-10-2018 PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 PIRSF PIRSF005496 1 838 0.0 T 12-10-2018 PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 SMART SM00487 5 189 2.1E-17 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 Gene3D G3DSA:3.40.50.300 2 182 1.6E-55 T 12-10-2018 PA257_1193 5d7c6a40c8276a8caef79a4804cc78ff 838 Pfam PF08482 ATP-dependent helicase C-terminal 694 825 4.5E-52 T 12-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal PA257_6733 c72a7625fb014ff351dbe1657bf42e2f 29 Gene3D G3DSA:1.10.3210.10 1 29 1.6E-6 T 12-10-2018 PA257_5154 33d9d0d58a907a3a3221d72d74fddd75 223 Gene3D G3DSA:3.40.50.2300 1 120 1.0E-37 T 12-10-2018 PA257_5154 33d9d0d58a907a3a3221d72d74fddd75 223 Pfam PF00072 Response regulator receiver domain 3 112 5.7E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5154 33d9d0d58a907a3a3221d72d74fddd75 223 SMART SM00862 145 218 9.4E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_5154 33d9d0d58a907a3a3221d72d74fddd75 223 Gene3D G3DSA:1.10.10.10 124 223 1.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5154 33d9d0d58a907a3a3221d72d74fddd75 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 2.2E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_5154 33d9d0d58a907a3a3221d72d74fddd75 223 SMART SM00448 1 112 2.1E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5154 33d9d0d58a907a3a3221d72d74fddd75 223 SUPERFAMILY SSF52172 1 173 9.68E-39 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6711 bdeffea19f949ec2a69581a851646c6d 425 Gene3D G3DSA:3.20.20.10 58 292 1.7E-31 T 12-10-2018 IPR029066 PLP-binding barrel PA257_6711 bdeffea19f949ec2a69581a851646c6d 425 Pfam PF01168 Alanine racemase, N-terminal domain 56 294 3.1E-25 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_6711 bdeffea19f949ec2a69581a851646c6d 425 SUPERFAMILY SSF51419 57 294 4.91E-20 T 12-10-2018 IPR029066 PLP-binding barrel PA257_6540 c7aae07ccddc79ee5f259da1e678a3e1 411 SUPERFAMILY SSF48179 312 404 1.7E-21 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_6540 c7aae07ccddc79ee5f259da1e678a3e1 411 Gene3D G3DSA:3.40.50.720 1 189 8.1E-67 T 12-10-2018 PA257_6540 c7aae07ccddc79ee5f259da1e678a3e1 411 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 317 401 2.7E-7 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_6540 c7aae07ccddc79ee5f259da1e678a3e1 411 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 281 6.0E-23 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_6540 c7aae07ccddc79ee5f259da1e678a3e1 411 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 187 1.1E-59 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_6540 c7aae07ccddc79ee5f259da1e678a3e1 411 SUPERFAMILY SSF48179 190 329 7.31E-24 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_6540 c7aae07ccddc79ee5f259da1e678a3e1 411 Gene3D G3DSA:1.10.1040.50 192 410 3.6E-70 T 12-10-2018 PA257_6540 c7aae07ccddc79ee5f259da1e678a3e1 411 SUPERFAMILY SSF51735 7 188 7.73E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4201 c3d38432c869f0bcae47c84e815af0c5 122 PIRSF PIRSF000169 1 122 1.4E-43 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 PA257_4201 c3d38432c869f0bcae47c84e815af0c5 122 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 120 3.3E-34 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 PA257_4201 c3d38432c869f0bcae47c84e815af0c5 122 Gene3D G3DSA:1.20.1300.10 1 122 6.9E-33 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4201 c3d38432c869f0bcae47c84e815af0c5 122 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 113 9.1E-7 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4201 c3d38432c869f0bcae47c84e815af0c5 122 SUPERFAMILY SSF81343 4 122 1.33E-27 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_0622 acedfc3735cae22e79080e9db6c3423b 725 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 723 0.0 T 12-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 PA257_0622 acedfc3735cae22e79080e9db6c3423b 725 SUPERFAMILY SSF51645 2 723 0.0 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 PA257_0622 acedfc3735cae22e79080e9db6c3423b 725 Gene3D G3DSA:1.20.1220.12 584 725 7.0E-76 T 12-10-2018 PA257_0622 acedfc3735cae22e79080e9db6c3423b 725 Pfam PF01274 Malate synthase 18 697 2.2E-178 T 12-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 PA257_0622 acedfc3735cae22e79080e9db6c3423b 725 Gene3D G3DSA:3.20.20.360 7 580 7.4E-289 T 12-10-2018 PA257_0622 acedfc3735cae22e79080e9db6c3423b 725 Gene3D G3DSA:2.170.170.11 135 264 7.4E-289 T 12-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 PA257_0622 acedfc3735cae22e79080e9db6c3423b 725 Hamap MF_00641 Malate synthase G [glcB]. 1 725 426.603 T 12-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 PA257_2852 76ad7610d7578f1cf895fe0450eb0f3a 226 SUPERFAMILY SSF52499 4 206 3.14E-45 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_2852 76ad7610d7578f1cf895fe0450eb0f3a 226 Gene3D G3DSA:3.40.50.850 2 206 2.9E-46 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_2852 76ad7610d7578f1cf895fe0450eb0f3a 226 Pfam PF00857 Isochorismatase family 14 167 1.8E-27 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_2125 69b40c7c341ed57d1a9de55984bd7812 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 5 400 1.9E-100 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PA257_2125 69b40c7c341ed57d1a9de55984bd7812 404 Pfam PF03616 Sodium/glutamate symporter 4 370 2.1E-148 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PA257_2125 69b40c7c341ed57d1a9de55984bd7812 404 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 4 403 22.183 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PA257_0830 dd971f6437737517386859d1c18ee849 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.678 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_0830 dd971f6437737517386859d1c18ee849 397 SUPERFAMILY SSF52540 6 222 4.15E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0830 dd971f6437737517386859d1c18ee849 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site PA257_0830 dd971f6437737517386859d1c18ee849 397 SUPERFAMILY SSF50465 301 396 3.74E-36 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PA257_0830 dd971f6437737517386859d1c18ee849 397 Gene3D G3DSA:3.40.50.300 1 206 6.5E-72 T 12-10-2018 PA257_0830 dd971f6437737517386859d1c18ee849 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 2.6E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0830 dd971f6437737517386859d1c18ee849 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 1.1E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PA257_0830 dd971f6437737517386859d1c18ee849 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 1.2E-15 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PA257_0830 dd971f6437737517386859d1c18ee849 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 397 1.7E-226 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_0830 dd971f6437737517386859d1c18ee849 397 Gene3D G3DSA:2.40.30.10 209 337 2.2E-53 T 12-10-2018 PA257_0830 dd971f6437737517386859d1c18ee849 397 SUPERFAMILY SSF50447 208 304 1.56E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_0830 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0830 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0830 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0830 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0830 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_0830 dd971f6437737517386859d1c18ee849 397 Gene3D G3DSA:2.40.30.10 341 396 1.2E-29 T 12-10-2018 PA257_0830 dd971f6437737517386859d1c18ee849 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 3.1E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_3527 23b24e72cc0763bf901d7498e2487b22 225 SUPERFAMILY SSF161098 22 214 2.09E-40 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3527 23b24e72cc0763bf901d7498e2487b22 225 Gene3D G3DSA:1.10.3720.10 17 225 1.0E-44 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3527 23b24e72cc0763bf901d7498e2487b22 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 114 3.4E-13 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_3527 23b24e72cc0763bf901d7498e2487b22 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 224 9.5E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_4704 02c919327c40d8f87863905698de5317 236 SUPERFAMILY SSF55120 65 235 1.13E-20 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_4704 02c919327c40d8f87863905698de5317 236 SMART SM00363 5 65 3.4E-5 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_4704 02c919327c40d8f87863905698de5317 236 SUPERFAMILY SSF55174 5 49 1.44E-10 T 12-10-2018 PA257_4704 02c919327c40d8f87863905698de5317 236 Gene3D G3DSA:3.10.290.10 3 59 2.0E-13 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PA257_4704 02c919327c40d8f87863905698de5317 236 Gene3D G3DSA:3.30.2350.10 62 235 6.9E-24 T 12-10-2018 PA257_4704 02c919327c40d8f87863905698de5317 236 Pfam PF01479 S4 domain 6 45 1.0E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 Pfam PF00072 Response regulator receiver domain 668 781 1.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 SMART SM00448 665 781 4.3E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 Gene3D G3DSA:1.20.1480.50 159 248 8.2E-7 T 12-10-2018 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 Pfam PF01627 Hpt domain 826 907 6.6E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 SUPERFAMILY SSF47384 269 349 4.51E-23 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 SMART SM00073 817 913 5.2E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 510 1.4E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 Gene3D G3DSA:3.40.50.2300 659 785 4.0E-40 T 12-10-2018 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 Pfam PF00512 His Kinase A (phospho-acceptor) domain 284 348 5.9E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 36 167 3.5E-20 T 12-10-2018 IPR019247 Histidine kinase BarA, N-terminal PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 SMART SM00304 191 243 1.4E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 SUPERFAMILY SSF158472 191 240 1.27E-5 T 12-10-2018 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 SUPERFAMILY SSF52172 663 786 5.12E-38 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 5.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 489 5.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 464 5.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 508 5.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 Gene3D G3DSA:1.10.287.130 249 346 1.1E-30 T 12-10-2018 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 SMART SM00387 395 511 3.4E-39 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 Gene3D G3DSA:1.20.120.160 805 912 6.6E-26 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 SUPERFAMILY SSF47226 764 901 3.79E-22 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 SUPERFAMILY SSF55874 337 509 2.75E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 Gene3D G3DSA:3.30.565.10 347 514 1.4E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4912 5707ffc7df9ad1b21a4346db57ec60dc 925 SMART SM00388 283 348 4.0E-27 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5834 2047fe9890a66bdc60689a18473befe4 182 Pfam PF05229 Spore Coat Protein U domain 29 179 9.8E-33 T 12-10-2018 IPR007893 Spore coat protein U PA257_5834 2047fe9890a66bdc60689a18473befe4 182 SMART SM00972 118 179 1.7E-18 T 12-10-2018 IPR007893 Spore coat protein U PA257_1448 253f266d749e160971437bb56bdbe070 463 Gene3D G3DSA:2.60.40.420 28 155 1.1E-38 T 12-10-2018 IPR008972 Cupredoxin PA257_1448 253f266d749e160971437bb56bdbe070 463 Gene3D G3DSA:2.60.40.420 157 308 5.1E-18 T 12-10-2018 IPR008972 Cupredoxin PA257_1448 253f266d749e160971437bb56bdbe070 463 Pfam PF07731 Multicopper oxidase 358 458 8.9E-25 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PA257_1448 253f266d749e160971437bb56bdbe070 463 Gene3D G3DSA:2.60.40.420 309 459 1.9E-36 T 12-10-2018 IPR008972 Cupredoxin PA257_1448 253f266d749e160971437bb56bdbe070 463 ProSitePatterns PS00079 Multicopper oxidases signature 1. 435 455 - T 12-10-2018 IPR033138 Multicopper oxidases, conserved site PA257_1448 253f266d749e160971437bb56bdbe070 463 SUPERFAMILY SSF49503 160 279 1.16E-18 T 12-10-2018 IPR008972 Cupredoxin PA257_1448 253f266d749e160971437bb56bdbe070 463 SUPERFAMILY SSF49503 322 457 1.34E-31 T 12-10-2018 IPR008972 Cupredoxin PA257_1448 253f266d749e160971437bb56bdbe070 463 Pfam PF07732 Multicopper oxidase 57 159 1.7E-34 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 PA257_1448 253f266d749e160971437bb56bdbe070 463 ProSitePatterns PS00080 Multicopper oxidases signature 2. 440 451 - T 12-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 PA257_1448 253f266d749e160971437bb56bdbe070 463 SUPERFAMILY SSF49503 36 158 4.53E-35 T 12-10-2018 IPR008972 Cupredoxin PA257_3847 6998a8da09d1ef242a94cb325fb7ce2a 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 15 162 5.0E-85 T 12-10-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PA257_3847 6998a8da09d1ef242a94cb325fb7ce2a 162 Pfam PF03284 Phenazine biosynthesis protein A/B 10 162 8.4E-91 T 12-10-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PA257_3847 6998a8da09d1ef242a94cb325fb7ce2a 162 SUPERFAMILY SSF54427 19 148 9.83E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_3847 6998a8da09d1ef242a94cb325fb7ce2a 162 Gene3D G3DSA:3.10.450.50 12 152 5.9E-48 T 12-10-2018 PA257_6962 94409f5629df26021006a6f972a216d7 178 Gene3D G3DSA:1.10.520.20 2 107 5.7E-35 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6962 94409f5629df26021006a6f972a216d7 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 3.9E-49 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6962 94409f5629df26021006a6f972a216d7 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 3.7E-56 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6962 94409f5629df26021006a6f972a216d7 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.687 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6962 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 3.8E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6962 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.8E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6962 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 3.8E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6962 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 3.8E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6962 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 3.8E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6962 94409f5629df26021006a6f972a216d7 178 SUPERFAMILY SSF47928 3 105 4.84E-25 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_2668 f6fca2aa405855b0bc9621e0811bc43b 276 Gene3D G3DSA:3.30.1130.10 140 276 7.2E-54 T 12-10-2018 PA257_2668 f6fca2aa405855b0bc9621e0811bc43b 276 Gene3D G3DSA:3.30.1130.10 16 134 1.6E-43 T 12-10-2018 PA257_2668 f6fca2aa405855b0bc9621e0811bc43b 276 SUPERFAMILY SSF55620 179 259 8.15E-10 T 12-10-2018 PA257_2668 f6fca2aa405855b0bc9621e0811bc43b 276 TIGRFAM TIGR03138 QueF: queuine synthase 5 276 1.7E-123 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PA257_2668 f6fca2aa405855b0bc9621e0811bc43b 276 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 16 126 2.2E-46 T 12-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PA257_2668 f6fca2aa405855b0bc9621e0811bc43b 276 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 276 150.278 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PA257_2668 f6fca2aa405855b0bc9621e0811bc43b 276 Pfam PF14489 QueF-like protein 190 262 1.3E-23 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PA257_2668 f6fca2aa405855b0bc9621e0811bc43b 276 PIRSF PIRSF004750 1 276 5.8E-119 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:3.30.479.20 57 143 1.4E-21 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:1.10.286.20 184 232 1.3E-42 T 12-10-2018 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:3.30.479.20 148 266 1.3E-42 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 SUPERFAMILY SSF46934 3 56 2.35E-16 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Hamap MF_00050 Elongation factor Ts [tsf]. 1 284 72.415 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 SUPERFAMILY SSF54713 56 141 6.21E-14 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 1.2E-95 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Pfam PF00889 Elongation factor TS 73 267 7.1E-59 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 SUPERFAMILY SSF54713 143 284 6.41E-49 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PA257_1566 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:1.10.8.10 1 56 8.3E-24 T 12-10-2018 PA257_1269 4dc5e7caa4ac9095538a562ced8aecd7 496 Pfam PF02321 Outer membrane efflux protein 65 257 1.5E-19 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_1269 4dc5e7caa4ac9095538a562ced8aecd7 496 Pfam PF02321 Outer membrane efflux protein 283 468 3.5E-23 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_1269 4dc5e7caa4ac9095538a562ced8aecd7 496 Gene3D G3DSA:1.20.1600.10 55 470 9.1E-109 T 12-10-2018 PA257_1269 4dc5e7caa4ac9095538a562ced8aecd7 496 SUPERFAMILY SSF56954 6 470 3.27E-95 T 12-10-2018 PA257_1269 4dc5e7caa4ac9095538a562ced8aecd7 496 Gene3D G3DSA:2.20.200.10 102 359 9.1E-109 T 12-10-2018 PA257_1269 4dc5e7caa4ac9095538a562ced8aecd7 496 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 470 1.4E-112 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_3915 8bd95490b45fed6fa7901efd8a4a1aee 100 SUPERFAMILY SSF141099 1 96 9.68E-38 T 12-10-2018 IPR036488 Atu1913-like superfamily PA257_3915 8bd95490b45fed6fa7901efd8a4a1aee 100 Gene3D G3DSA:4.10.1210.10 1 91 4.0E-19 T 12-10-2018 IPR036488 Atu1913-like superfamily PA257_3915 8bd95490b45fed6fa7901efd8a4a1aee 100 Pfam PF08980 Domain of unknown function (DUF1883) 1 75 1.5E-32 T 12-10-2018 IPR015073 Domain of unknown function DUF1883 PA257_4343 104a5b4c6f92f6c1c9cd5730fc129880 422 Pfam PF04536 TPM domain 49 171 1.9E-37 T 12-10-2018 IPR007621 TPM domain PA257_4343 104a5b4c6f92f6c1c9cd5730fc129880 422 Gene3D G3DSA:3.10.310.50 35 179 2.5E-47 T 12-10-2018 PA257_4288 34f83a557d7d0969bf4aff943ae18b7b 331 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 314 3.3E-38 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_4288 34f83a557d7d0969bf4aff943ae18b7b 331 Gene3D G3DSA:3.20.20.70 3 331 2.8E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4288 34f83a557d7d0969bf4aff943ae18b7b 331 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 6 331 41.841 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_4288 34f83a557d7d0969bf4aff943ae18b7b 331 Pfam PF13353 4Fe-4S single cluster domain 22 121 1.1E-6 T 12-10-2018 PA257_4288 34f83a557d7d0969bf4aff943ae18b7b 331 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 21 32 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_4288 34f83a557d7d0969bf4aff943ae18b7b 331 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 331 8.4E-113 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_4288 34f83a557d7d0969bf4aff943ae18b7b 331 Pfam PF04055 Radical SAM superfamily 20 179 2.0E-30 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_4288 34f83a557d7d0969bf4aff943ae18b7b 331 SUPERFAMILY SSF102114 6 278 8.89E-77 T 12-10-2018 PA257_4288 34f83a557d7d0969bf4aff943ae18b7b 331 SMART SM00729 15 219 2.2E-14 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_0061 438a65a1742ed30102ba58db3565e754 417 Pfam PF13194 Domain of unknown function (DUF4010) 184 392 8.9E-61 T 12-10-2018 IPR025105 Domain of unknown function DUF4010 PA257_0061 438a65a1742ed30102ba58db3565e754 417 Pfam PF02308 MgtC family 11 136 2.0E-18 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_1918 38214e46214b72ba87b5ad6548773f04 447 SUPERFAMILY SSF54368 15 107 1.07E-8 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_1918 38214e46214b72ba87b5ad6548773f04 447 Pfam PF00120 Glutamine synthetase, catalytic domain 111 441 1.2E-103 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_1918 38214e46214b72ba87b5ad6548773f04 447 SMART SM01230 109 365 1.1E-101 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_1918 38214e46214b72ba87b5ad6548773f04 447 SUPERFAMILY SSF55931 110 442 6.08E-100 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_1918 38214e46214b72ba87b5ad6548773f04 447 Gene3D G3DSA:3.30.590.10 113 445 4.5E-95 T 12-10-2018 PA257_3557 1211be5940de1c9ede4b4bac665e43aa 258 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 84 114 - T 12-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 PA257_3557 1211be5940de1c9ede4b4bac665e43aa 258 SUPERFAMILY SSF53474 4 238 1.24E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3557 1211be5940de1c9ede4b4bac665e43aa 258 Gene3D G3DSA:3.40.50.1820 29 243 1.2E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3557 1211be5940de1c9ede4b4bac665e43aa 258 Pfam PF00326 Prolyl oligopeptidase family 48 239 9.6E-11 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PA257_1219 9329fb38a6732526ff29a9d212689287 263 Gene3D G3DSA:3.40.50.300 3 248 1.8E-63 T 12-10-2018 PA257_1219 9329fb38a6732526ff29a9d212689287 263 SUPERFAMILY SSF52540 7 219 4.91E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1219 9329fb38a6732526ff29a9d212689287 263 Pfam PF00005 ABC transporter 23 162 3.9E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1219 9329fb38a6732526ff29a9d212689287 263 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1219 9329fb38a6732526ff29a9d212689287 263 SMART SM00382 32 213 1.0E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5194 a7cb14c37b7f10039726583138639224 146 SUPERFAMILY SSF50249 3 139 9.94E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_5194 a7cb14c37b7f10039726583138639224 146 Pfam PF00436 Single-strand binding protein family 9 109 2.7E-11 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 PA257_5194 a7cb14c37b7f10039726583138639224 146 Gene3D G3DSA:2.40.50.140 5 145 2.2E-20 T 12-10-2018 PA257_5194 a7cb14c37b7f10039726583138639224 146 PIRSF PIRSF002070 1 146 1.3E-22 T 12-10-2018 PA257_5187 c9ecdbb8968a544a4b13c55b996cf0fc 291 Gene3D G3DSA:3.40.50.300 1 272 4.5E-48 T 12-10-2018 PA257_5187 c9ecdbb8968a544a4b13c55b996cf0fc 291 SUPERFAMILY SSF52540 1 266 1.98E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5187 c9ecdbb8968a544a4b13c55b996cf0fc 291 Pfam PF13614 AAA domain 1 168 5.5E-26 T 12-10-2018 IPR025669 AAA domain PA257_4840 9dfe7e98628adb7d4a7405d745b2c860 181 Gene3D G3DSA:3.30.420.10 9 142 5.0E-19 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_4840 9dfe7e98628adb7d4a7405d745b2c860 181 SUPERFAMILY SSF53098 10 166 2.78E-34 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_4840 9dfe7e98628adb7d4a7405d745b2c860 181 Pfam PF13683 Integrase core domain 96 158 3.7E-22 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 625 37.77 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 SMART SM00382 186 325 6.4E-26 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 SUPERFAMILY SSF140990 404 606 2.35E-77 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 Gene3D G3DSA:1.20.58.760 399 601 2.3E-75 T 12-10-2018 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 Gene3D G3DSA:3.40.50.300 139 324 5.7E-70 T 12-10-2018 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 Gene3D G3DSA:2.40.50.920 22 100 2.2E-15 T 12-10-2018 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 Gene3D G3DSA:1.10.8.60 325 398 2.8E-27 T 12-10-2018 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 99 596 2.4E-239 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 Pfam PF06480 FtsH Extracellular 5 91 1.2E-12 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 SUPERFAMILY SSF52540 145 393 7.98E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 Pfam PF01434 Peptidase family M41 384 595 1.0E-81 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 PA257_5968 df0cdcf7573af69298f2bab61f0be212 639 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 9.8E-46 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_3976 704a816bda8e44edabe4ef298654f1e3 165 Gene3D G3DSA:2.40.100.10 1 163 2.1E-66 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_3976 704a816bda8e44edabe4ef298654f1e3 165 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 5.3E-46 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PA257_3976 704a816bda8e44edabe4ef298654f1e3 165 SUPERFAMILY SSF50891 2 162 4.53E-57 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_3976 704a816bda8e44edabe4ef298654f1e3 165 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PA257_3976 704a816bda8e44edabe4ef298654f1e3 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.4E-13 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PA257_3976 704a816bda8e44edabe4ef298654f1e3 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.4E-13 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PA257_3976 704a816bda8e44edabe4ef298654f1e3 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.4E-13 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PA257_3976 704a816bda8e44edabe4ef298654f1e3 165 PIRSF PIRSF001467 1 165 2.9E-26 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 PA257_6913 516d5113e4bf539b565e03cf89286091 588 SUPERFAMILY SSF55874 433 579 9.3E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6913 516d5113e4bf539b565e03cf89286091 588 Pfam PF00512 His Kinase A (phospho-acceptor) domain 362 430 9.4E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6913 516d5113e4bf539b565e03cf89286091 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6913 516d5113e4bf539b565e03cf89286091 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6913 516d5113e4bf539b565e03cf89286091 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6913 516d5113e4bf539b565e03cf89286091 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6913 516d5113e4bf539b565e03cf89286091 588 Gene3D G3DSA:3.30.450.20 59 181 2.7E-73 T 12-10-2018 PA257_6913 516d5113e4bf539b565e03cf89286091 588 Gene3D G3DSA:3.30.450.20 46 287 2.7E-73 T 12-10-2018 PA257_6913 516d5113e4bf539b565e03cf89286091 588 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 472 579 1.8E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6913 516d5113e4bf539b565e03cf89286091 588 SUPERFAMILY SSF47384 358 431 1.96E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_6913 516d5113e4bf539b565e03cf89286091 588 Gene3D G3DSA:1.10.287.130 340 425 3.3E-16 T 12-10-2018 PA257_6913 516d5113e4bf539b565e03cf89286091 588 Gene3D G3DSA:3.30.565.10 432 585 4.4E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6913 516d5113e4bf539b565e03cf89286091 588 SMART SM00387 472 581 1.0E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6913 516d5113e4bf539b565e03cf89286091 588 SUPERFAMILY SSF103190 108 193 7.06E-14 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily PA257_6913 516d5113e4bf539b565e03cf89286091 588 SMART SM00388 362 430 3.2E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6913 516d5113e4bf539b565e03cf89286091 588 PIRSF PIRSF036431 1 588 7.8E-193 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PA257_1179 f5083bbdeaf805d9009e1bc4ccf080be 215 Gene3D G3DSA:1.10.357.10 61 209 1.7E-13 T 12-10-2018 PA257_1179 f5083bbdeaf805d9009e1bc4ccf080be 215 Gene3D G3DSA:1.10.10.60 1 60 8.0E-13 T 12-10-2018 PA257_1179 f5083bbdeaf805d9009e1bc4ccf080be 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.1E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1179 f5083bbdeaf805d9009e1bc4ccf080be 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.1E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1179 f5083bbdeaf805d9009e1bc4ccf080be 215 SUPERFAMILY SSF46689 10 78 7.48E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1179 f5083bbdeaf805d9009e1bc4ccf080be 215 SUPERFAMILY SSF48498 91 177 7.71E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_1179 f5083bbdeaf805d9009e1bc4ccf080be 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_1179 f5083bbdeaf805d9009e1bc4ccf080be 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 4.7E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4232 a89145b2963255e7c9ff9be5c6981b29 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4232 a89145b2963255e7c9ff9be5c6981b29 475 Gene3D G3DSA:1.20.210.10 2 475 2.5E-212 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4232 a89145b2963255e7c9ff9be5c6981b29 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 472 6.5E-226 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PA257_4232 a89145b2963255e7c9ff9be5c6981b29 475 SUPERFAMILY SSF81442 9 468 9.55E-122 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4232 a89145b2963255e7c9ff9be5c6981b29 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 442 4.0E-112 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4241 a02468acfd347f7a99e66d50ff7da8c8 227 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 11 212 1.2E-55 T 12-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain PA257_2129 53c9fa9254651c481bde666ab0277fee 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 180 6.4E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_2129 53c9fa9254651c481bde666ab0277fee 223 SUPERFAMILY SSF56784 3 217 7.63E-62 T 12-10-2018 IPR036412 HAD-like superfamily PA257_2129 53c9fa9254651c481bde666ab0277fee 223 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 6 214 1.7E-52 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 PA257_2129 53c9fa9254651c481bde666ab0277fee 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 184 6.3E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_2129 53c9fa9254651c481bde666ab0277fee 223 Gene3D G3DSA:1.10.150.240 18 84 6.7E-58 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PA257_2129 53c9fa9254651c481bde666ab0277fee 223 Gene3D G3DSA:3.40.50.1000 6 206 6.7E-58 T 12-10-2018 IPR023214 HAD superfamily PA257_2129 53c9fa9254651c481bde666ab0277fee 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 186 1.8E-34 T 12-10-2018 PA257_0039 1d3f960316c13182ed24accdb07f20bc 307 SUPERFAMILY SSF53850 22 295 2.26E-81 T 12-10-2018 PA257_0039 1d3f960316c13182ed24accdb07f20bc 307 Gene3D G3DSA:3.40.190.100 111 220 9.7E-84 T 12-10-2018 PA257_0039 1d3f960316c13182ed24accdb07f20bc 307 Gene3D G3DSA:3.40.190.10 30 288 9.7E-84 T 12-10-2018 PA257_0039 1d3f960316c13182ed24accdb07f20bc 307 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 305 5.1E-127 T 12-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 PA257_0039 1d3f960316c13182ed24accdb07f20bc 307 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 279 5.9E-56 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PA257_0792 743272031d592f5d28b9700b2b330524 493 SUPERFAMILY SSF52540 41 214 1.4E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0792 743272031d592f5d28b9700b2b330524 493 SUPERFAMILY SSF52540 234 448 1.11E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0792 743272031d592f5d28b9700b2b330524 493 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 269 395 4.8E-27 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_0792 743272031d592f5d28b9700b2b330524 493 SMART SM00382 265 398 4.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0792 743272031d592f5d28b9700b2b330524 493 Gene3D G3DSA:1.10.8.60 397 467 2.1E-9 T 12-10-2018 PA257_0792 743272031d592f5d28b9700b2b330524 493 Gene3D G3DSA:3.40.50.300 230 396 2.2E-33 T 12-10-2018 PA257_6867 3881b5d64e5daf1383d40c15443e8fac 120 Pfam PF09498 Protein of unknown function (DUF2388) 54 117 2.1E-21 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_6867 3881b5d64e5daf1383d40c15443e8fac 120 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 51 117 9.0E-20 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_0877 17167086e8ebc7344f6e72fa74d311c3 414 Pfam PF13000 Acetyl-coenzyme A transporter 1 14 93 1.6E-19 T 12-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 PA257_0877 17167086e8ebc7344f6e72fa74d311c3 414 SUPERFAMILY SSF103473 5 399 1.26E-30 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0877 17167086e8ebc7344f6e72fa74d311c3 414 TIGRFAM TIGR02718 sider_RhtX_FptX: siderophore transporter, RhtX/FptX family 9 398 2.2E-208 T 12-10-2018 IPR014090 Siderophore transporter, RhtX/FptX family PA257_0877 17167086e8ebc7344f6e72fa74d311c3 414 Gene3D G3DSA:1.20.1250.20 4 401 9.4E-27 T 12-10-2018 PA257_1688 d2cb47e183be5b9f8366289364beda80 306 SUPERFAMILY SSF53850 88 287 5.58E-36 T 12-10-2018 PA257_1688 d2cb47e183be5b9f8366289364beda80 306 Pfam PF03466 LysR substrate binding domain 88 287 2.3E-37 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1688 d2cb47e183be5b9f8366289364beda80 306 Gene3D G3DSA:3.40.190.10 163 268 3.6E-76 T 12-10-2018 PA257_1688 d2cb47e183be5b9f8366289364beda80 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.7E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1688 d2cb47e183be5b9f8366289364beda80 306 Gene3D G3DSA:3.40.190.10 89 289 3.6E-76 T 12-10-2018 PA257_1688 d2cb47e183be5b9f8366289364beda80 306 SUPERFAMILY SSF46785 1 112 8.84E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1688 d2cb47e183be5b9f8366289364beda80 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.3E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1688 d2cb47e183be5b9f8366289364beda80 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.3E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1688 d2cb47e183be5b9f8366289364beda80 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.3E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1688 d2cb47e183be5b9f8366289364beda80 306 Gene3D G3DSA:1.10.10.10 1 88 1.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2467 0ca92ff476d439de2557d13290146450 284 Gene3D G3DSA:3.40.190.10 100 263 3.1E-55 T 12-10-2018 PA257_2467 0ca92ff476d439de2557d13290146450 284 Gene3D G3DSA:1.10.10.10 7 96 2.7E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2467 0ca92ff476d439de2557d13290146450 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.0E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2467 0ca92ff476d439de2557d13290146450 284 Gene3D G3DSA:3.40.190.10 163 256 3.1E-55 T 12-10-2018 PA257_2467 0ca92ff476d439de2557d13290146450 284 SUPERFAMILY SSF53850 95 282 3.26E-26 T 12-10-2018 PA257_2467 0ca92ff476d439de2557d13290146450 284 Pfam PF03466 LysR substrate binding domain 96 282 1.7E-25 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2467 0ca92ff476d439de2557d13290146450 284 SUPERFAMILY SSF46785 7 116 1.68E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1380 b55917d7e14491c8832d7293ee1b1f49 719 Gene3D G3DSA:2.170.130.10 69 183 1.3E-13 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_1380 b55917d7e14491c8832d7293ee1b1f49 719 Pfam PF00593 TonB dependent receptor 232 717 6.2E-50 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_1380 b55917d7e14491c8832d7293ee1b1f49 719 SUPERFAMILY SSF56935 67 719 1.05E-94 T 12-10-2018 PA257_1380 b55917d7e14491c8832d7293ee1b1f49 719 Gene3D G3DSA:2.40.170.20 189 719 6.3E-75 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_1380 b55917d7e14491c8832d7293ee1b1f49 719 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 78 719 0.0 T 12-10-2018 IPR010100 TonB-dependent copper receptor PA257_1380 b55917d7e14491c8832d7293ee1b1f49 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 177 3.0E-12 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_5002 1422339aeb83e796d83812086e9fcde1 651 SUPERFAMILY SSF55785 349 474 4.35E-28 T 12-10-2018 IPR035965 PAS domain superfamily PA257_5002 1422339aeb83e796d83812086e9fcde1 651 SUPERFAMILY SSF55073 492 647 6.36E-47 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_5002 1422339aeb83e796d83812086e9fcde1 651 SMART SM00091 362 428 6.3E-15 T 12-10-2018 IPR000014 PAS domain PA257_5002 1422339aeb83e796d83812086e9fcde1 651 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 359 483 3.2E-23 T 12-10-2018 IPR000014 PAS domain PA257_5002 1422339aeb83e796d83812086e9fcde1 651 Gene3D G3DSA:1.10.287.130 311 369 2.6E-6 T 12-10-2018 PA257_5002 1422339aeb83e796d83812086e9fcde1 651 Pfam PF00989 PAS fold 363 473 9.1E-16 T 12-10-2018 IPR013767 PAS fold GO:0006355 PA257_5002 1422339aeb83e796d83812086e9fcde1 651 SMART SM00086 434 476 8.1E-5 T 12-10-2018 IPR001610 PAC motif PA257_5002 1422339aeb83e796d83812086e9fcde1 651 Pfam PF00990 Diguanylate cyclase, GGDEF domain 487 641 1.7E-45 T 12-10-2018 IPR000160 GGDEF domain PA257_5002 1422339aeb83e796d83812086e9fcde1 651 Pfam PF00672 HAMP domain 311 359 8.5E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5002 1422339aeb83e796d83812086e9fcde1 651 Gene3D G3DSA:3.30.70.270 486 649 4.8E-57 T 12-10-2018 PA257_5002 1422339aeb83e796d83812086e9fcde1 651 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 485 643 1.3E-42 T 12-10-2018 IPR000160 GGDEF domain PA257_5002 1422339aeb83e796d83812086e9fcde1 651 Pfam PF05228 CHASE4 domain 53 215 3.8E-28 T 12-10-2018 IPR007892 CHASE4 PA257_5002 1422339aeb83e796d83812086e9fcde1 651 SMART SM00267 476 647 1.3E-63 T 12-10-2018 IPR000160 GGDEF domain PA257_5002 1422339aeb83e796d83812086e9fcde1 651 Gene3D G3DSA:3.30.450.20 370 485 2.3E-23 T 12-10-2018 PA257_5002 1422339aeb83e796d83812086e9fcde1 651 SMART SM00304 310 362 3.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5002 1422339aeb83e796d83812086e9fcde1 651 SUPERFAMILY SSF158472 311 359 6.8E-5 T 12-10-2018 PA257_0758 fb7743081bda04331fac616f74636e8e 492 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 484 3.2E-169 T 12-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_0758 fb7743081bda04331fac616f74636e8e 492 PRINTS PR00095 Anthranilate synthase component I signature 433 447 1.1E-25 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_0758 fb7743081bda04331fac616f74636e8e 492 PRINTS PR00095 Anthranilate synthase component I signature 418 432 1.1E-25 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_0758 fb7743081bda04331fac616f74636e8e 492 PRINTS PR00095 Anthranilate synthase component I signature 338 351 1.1E-25 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_0758 fb7743081bda04331fac616f74636e8e 492 PRINTS PR00095 Anthranilate synthase component I signature 324 337 1.1E-25 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_0758 fb7743081bda04331fac616f74636e8e 492 Pfam PF00425 chorismate binding enzyme 223 476 2.6E-97 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PA257_0758 fb7743081bda04331fac616f74636e8e 492 SUPERFAMILY SSF56322 14 485 3.79E-159 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_0758 fb7743081bda04331fac616f74636e8e 492 Gene3D G3DSA:3.60.120.10 1 492 2.1E-181 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_0758 fb7743081bda04331fac616f74636e8e 492 Pfam PF04715 Anthranilate synthase component I, N terminal region 28 168 3.9E-32 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_5809 8de7f2b2ad87f00ae8f9c0ad9dbde7b8 2182 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 103 178 6.8E-19 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_5809 8de7f2b2ad87f00ae8f9c0ad9dbde7b8 2182 SMART SM00912 69 181 1.2E-35 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_5809 8de7f2b2ad87f00ae8f9c0ad9dbde7b8 2182 SUPERFAMILY SSF51126 92 365 1.54E-43 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor PA257_5809 8de7f2b2ad87f00ae8f9c0ad9dbde7b8 2182 Pfam PF05860 haemagglutination activity domain 71 181 2.5E-22 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_5809 8de7f2b2ad87f00ae8f9c0ad9dbde7b8 2182 Gene3D G3DSA:2.160.20.10 71 454 3.2E-86 T 12-10-2018 IPR012334 Pectin lyase fold PA257_4732 93c97c319e6c3aafac2233c1c42f7500 378 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 364 6.3E-100 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PA257_4732 93c97c319e6c3aafac2233c1c42f7500 378 Gene3D G3DSA:3.40.640.10 3 371 4.4E-103 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_4732 93c97c319e6c3aafac2233c1c42f7500 378 PIRSF PIRSF000390 1 372 1.3E-102 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PA257_4732 93c97c319e6c3aafac2233c1c42f7500 378 SUPERFAMILY SSF53383 5 369 1.04E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6571 0c58af7a70d97ba1f8684d3e18f3eac5 397 SUPERFAMILY SSF103473 10 379 4.45E-45 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6571 0c58af7a70d97ba1f8684d3e18f3eac5 397 Pfam PF07690 Major Facilitator Superfamily 12 346 3.1E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6571 0c58af7a70d97ba1f8684d3e18f3eac5 397 Gene3D G3DSA:1.20.1250.20 9 383 5.4E-36 T 12-10-2018 PA257_6277 2632fd948bb255019499f141d9431afe 294 Gene3D G3DSA:3.40.190.290 95 273 4.2E-34 T 12-10-2018 PA257_6277 2632fd948bb255019499f141d9431afe 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6277 2632fd948bb255019499f141d9431afe 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6277 2632fd948bb255019499f141d9431afe 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6277 2632fd948bb255019499f141d9431afe 294 Pfam PF03466 LysR substrate binding domain 90 290 3.2E-30 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6277 2632fd948bb255019499f141d9431afe 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 65 1.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6277 2632fd948bb255019499f141d9431afe 294 Gene3D G3DSA:1.10.10.10 1 86 1.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6277 2632fd948bb255019499f141d9431afe 294 SUPERFAMILY SSF46785 2 85 4.67E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6277 2632fd948bb255019499f141d9431afe 294 SUPERFAMILY SSF53850 91 292 2.33E-31 T 12-10-2018 PA257_5844 0496ea47ccc0cda928699986241e526d 319 Pfam PF08349 Protein of unknown function (DUF1722) 194 310 5.0E-41 T 12-10-2018 IPR013560 Domain of unknown function DUF1722 PA257_5844 0496ea47ccc0cda928699986241e526d 319 Pfam PF04463 Protein of unknown function (DUF523) 14 151 1.5E-33 T 12-10-2018 IPR007553 Domain of unknown function DUF523 PA257_5844 0496ea47ccc0cda928699986241e526d 319 PIRSF PIRSF037004 4 319 4.0E-124 T 12-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 PA257_2254 a22b6fe9a13172875db428cd5748501a 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2254 a22b6fe9a13172875db428cd5748501a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 4.9E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2254 a22b6fe9a13172875db428cd5748501a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 4.9E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2254 a22b6fe9a13172875db428cd5748501a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 4.9E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2254 a22b6fe9a13172875db428cd5748501a 207 Gene3D G3DSA:3.40.50.12740 3 207 3.4E-52 T 12-10-2018 PA257_2254 a22b6fe9a13172875db428cd5748501a 207 SMART SM00448 2 114 4.0E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2254 a22b6fe9a13172875db428cd5748501a 207 SUPERFAMILY SSF52172 2 170 2.85E-30 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2254 a22b6fe9a13172875db428cd5748501a 207 Pfam PF00072 Response regulator receiver domain 4 115 4.9E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2254 a22b6fe9a13172875db428cd5748501a 207 SMART SM00421 144 201 1.3E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2254 a22b6fe9a13172875db428cd5748501a 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 4.4E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 Gene3D G3DSA:2.40.240.10 346 555 3.2E-87 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 SUPERFAMILY SSF50715 346 557 4.45E-69 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 Gene3D G3DSA:3.90.800.10 107 215 1.6E-103 T 12-10-2018 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 346 537 3.0E-58 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 Gene3D G3DSA:3.40.50.620 34 254 1.6E-103 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 33 326 1.1E-108 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 Gene3D G3DSA:2.40.240.10 354 470 3.2E-87 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 558 4.7E-229 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 66 79 2.8E-8 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 51 62 2.8E-8 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 49 2.8E-8 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 2.8E-8 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 558 54.146 T 12-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 SUPERFAMILY SSF52374 33 352 8.16E-98 T 12-10-2018 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_3975 d1cf2b1cb2b14e691702a07d25432803 561 Gene3D G3DSA:1.10.1160.10 267 345 2.5E-33 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 SUPERFAMILY SSF46689 355 436 3.76E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:1.10.10.60 379 439 7.3E-8 T 12-10-2018 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:3.40.50.2300 1 129 4.3E-38 T 12-10-2018 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 Pfam PF02954 Bacterial regulatory protein, Fis family 394 433 1.1E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 SUPERFAMILY SSF52172 5 187 1.85E-43 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:3.40.50.300 130 315 3.0E-62 T 12-10-2018 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 Pfam PF00072 Response regulator receiver domain 5 113 7.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 SMART SM00448 3 114 1.0E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 SMART SM00382 164 307 4.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:1.10.8.60 316 378 2.5E-18 T 12-10-2018 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 Pfam PF00158 Sigma-54 interaction domain 145 310 4.5E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_6912 2ee032b71f1432ca04bf81882ebc8ead 447 SUPERFAMILY SSF52540 144 373 4.49E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.9E-169 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 ProSitePatterns PS00321 recA signature. 213 221 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 Hamap MF_00268 Protein RecA [recA]. 5 329 50.98 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 127 156 8.6E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 210 238 8.6E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 297 314 8.6E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 165 194 8.6E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 243 272 8.6E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 93 122 8.6E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 SUPERFAMILY SSF54752 269 324 8.24E-20 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 Gene3D G3DSA:3.40.50.300 26 267 1.1E-82 T 12-10-2018 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 SUPERFAMILY SSF52540 5 267 5.88E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 SMART SM00382 57 228 9.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 Pfam PF00154 recA bacterial DNA recombination protein 7 267 7.5E-144 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PA257_1657 4a2e2c874a32e8d29b02bf6bcd78e201 346 Gene3D G3DSA:3.30.250.10 268 346 1.5E-24 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal PA257_4989 39fd4f5df9089e371d8fd72f887a52c6 596 Pfam PF00005 ABC transporter 375 523 4.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4989 39fd4f5df9089e371d8fd72f887a52c6 596 SUPERFAMILY SSF52540 356 591 1.96E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4989 39fd4f5df9089e371d8fd72f887a52c6 596 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4989 39fd4f5df9089e371d8fd72f887a52c6 596 Gene3D G3DSA:3.40.50.300 353 593 2.4E-81 T 12-10-2018 PA257_4989 39fd4f5df9089e371d8fd72f887a52c6 596 SUPERFAMILY SSF90123 13 343 1.83E-54 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_4989 39fd4f5df9089e371d8fd72f887a52c6 596 SMART SM00382 384 575 7.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4989 39fd4f5df9089e371d8fd72f887a52c6 596 Gene3D G3DSA:1.20.1560.10 12 340 9.0E-51 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_4989 39fd4f5df9089e371d8fd72f887a52c6 596 Pfam PF00664 ABC transporter transmembrane region 61 313 6.4E-29 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 SUPERFAMILY SSF52210 240 384 8.9E-54 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 Pfam PF00549 CoA-ligase 262 382 1.4E-24 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.519 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 Gene3D G3DSA:3.30.470.20 1 234 2.0E-96 T 12-10-2018 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 Pfam PF08442 ATP-grasp domain 2 203 3.9E-83 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 PIRSF PIRSF001554 1 388 2.7E-157 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 SUPERFAMILY SSF56059 1 237 1.9E-82 T 12-10-2018 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 Gene3D G3DSA:3.40.50.261 240 388 2.6E-57 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.4E-177 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_4195 14a7396624b7f524b09554cb0ddc0fb9 388 Gene3D G3DSA:3.30.1490.20 21 104 2.0E-96 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_1976 098c47856b04d8d23edf4d6fd8237275 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 235 2.7E-31 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_1976 098c47856b04d8d23edf4d6fd8237275 285 SUPERFAMILY SSF111369 42 222 1.03E-17 T 12-10-2018 PA257_1976 098c47856b04d8d23edf4d6fd8237275 285 Gene3D G3DSA:2.40.50.100 43 109 6.3E-9 T 12-10-2018 PA257_1976 098c47856b04d8d23edf4d6fd8237275 285 Gene3D G3DSA:2.40.30.170 166 285 2.5E-30 T 12-10-2018 PA257_1976 098c47856b04d8d23edf4d6fd8237275 285 Pfam PF13533 Biotin-lipoyl like 43 88 9.5E-16 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PA257_1976 098c47856b04d8d23edf4d6fd8237275 285 Pfam PF13437 HlyD family secretion protein 153 236 2.0E-12 T 12-10-2018 PA257_1305 d573d4191f3341217ce1da10a5ebe853 632 Gene3D G3DSA:3.30.300.30 471 574 6.1E-26 T 12-10-2018 PA257_1305 d573d4191f3341217ce1da10a5ebe853 632 Pfam PF00501 AMP-binding enzyme 34 476 5.0E-87 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_1305 d573d4191f3341217ce1da10a5ebe853 632 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 561 1.4E-16 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_1305 d573d4191f3341217ce1da10a5ebe853 632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 221 232 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_1305 d573d4191f3341217ce1da10a5ebe853 632 Gene3D G3DSA:3.40.50.12780 22 469 1.9E-101 T 12-10-2018 PA257_1305 d573d4191f3341217ce1da10a5ebe853 632 SUPERFAMILY SSF56801 22 570 1.09E-131 T 12-10-2018 PA257_5501 23d857f0abe67faf5dee040535b8140a 345 Gene3D G3DSA:3.20.20.100 1 345 1.5E-125 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_5501 23d857f0abe67faf5dee040535b8140a 345 SUPERFAMILY SSF51430 1 343 9.82E-105 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_5501 23d857f0abe67faf5dee040535b8140a 345 PRINTS PR00069 Aldo-keto reductase signature 163 180 2.2E-7 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_5501 23d857f0abe67faf5dee040535b8140a 345 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.2E-7 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_5501 23d857f0abe67faf5dee040535b8140a 345 Pfam PF00248 Aldo/keto reductase family 16 336 1.4E-65 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 SUPERFAMILY SSF52172 1 178 3.7E-44 T 12-10-2018 IPR011006 CheY-like superfamily PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 SUPERFAMILY SSF52540 135 377 1.4E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 1.5E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 445 1.5E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 Gene3D G3DSA:3.40.50.2300 4 122 2.0E-34 T 12-10-2018 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 SMART SM00382 155 298 8.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 221 236 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 Gene3D G3DSA:1.10.10.60 384 445 1.6E-16 T 12-10-2018 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 Gene3D G3DSA:1.10.8.60 306 382 2.1E-23 T 12-10-2018 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 Pfam PF00158 Sigma-54 interaction domain 135 301 5.2E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 SMART SM00448 4 115 7.0E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 Pfam PF00072 Response regulator receiver domain 7 115 2.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 159 172 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 SUPERFAMILY SSF46689 349 445 3.99E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 Gene3D G3DSA:3.40.50.300 123 305 2.5E-59 T 12-10-2018 PA257_5723 b60de5fa185ff86afb5eb36f8089bd0e 445 Pfam PF02954 Bacterial regulatory protein, Fis family 402 442 2.3E-16 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_1801 937887c589bfbc7218fc730b1ec1524a 442 SUPERFAMILY SSF50182 188 255 1.18E-11 T 12-10-2018 IPR010920 LSM domain superfamily PA257_1801 937887c589bfbc7218fc730b1ec1524a 442 Pfam PF00924 Mechanosensitive ion channel 146 399 3.5E-44 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PA257_2724 db921293763694579346817c4725122c 1188 Pfam PF09327 Domain of unknown function (DUF1983) 1034 1112 3.3E-22 T 12-10-2018 IPR015406 Domain of unknown function DUF1983 PA257_2724 db921293763694579346817c4725122c 1188 Pfam PF13550 Putative phage tail protein 345 505 3.8E-17 T 12-10-2018 IPR032876 Tip attachment protein J PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 44 53 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 Gene3D G3DSA:3.90.700.10 249 352 5.4E-161 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 SUPERFAMILY SSF51905 6 427 3.97E-74 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 Gene3D G3DSA:4.10.80.40 550 590 2.7E-25 T 12-10-2018 PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 Pfam PF00890 FAD binding domain 10 407 4.4E-118 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 590 6.2E-41 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 10 590 2.5E-258 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 8 590 0.0 T 12-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 Gene3D G3DSA:3.50.50.60 10 418 5.4E-161 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 Gene3D G3DSA:1.20.58.100 433 549 1.7E-40 T 12-10-2018 PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 PIRSF PIRSF000171 1 580 2.6E-48 T 12-10-2018 PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 SUPERFAMILY SSF46977 454 590 2.35E-49 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4200 3eace1ac6ecd017e4622c2f74d66b2ab 590 SUPERFAMILY SSF56425 240 358 8.52E-40 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_3247 7aaaa616c10a8612de626b287c59d2db 448 Gene3D G3DSA:1.10.287.650 306 363 2.6E-153 T 12-10-2018 PA257_3247 7aaaa616c10a8612de626b287c59d2db 448 SUPERFAMILY SSF51556 42 443 2.27E-78 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_3247 7aaaa616c10a8612de626b287c59d2db 448 Gene3D G3DSA:3.20.20.140 46 439 2.6E-153 T 12-10-2018 PA257_3247 7aaaa616c10a8612de626b287c59d2db 448 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 49 436 1.2E-106 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 PA257_0616 c9f38fbcef68deff67b264e7ec6ca3ea 575 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 109 530 4.9E-78 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 PA257_0616 c9f38fbcef68deff67b264e7ec6ca3ea 575 Gene3D G3DSA:1.10.4160.10 95 563 1.5E-106 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily PA257_3310 3ac67f33145661bc9414a466e546b05b 186 Gene3D G3DSA:1.20.1290.10 13 182 1.3E-40 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_3310 3ac67f33145661bc9414a466e546b05b 186 SUPERFAMILY SSF69118 1 183 1.14E-46 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_3310 3ac67f33145661bc9414a466e546b05b 186 Pfam PF02627 Carboxymuconolactone decarboxylase family 43 108 3.2E-10 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_3310 3ac67f33145661bc9414a466e546b05b 186 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 63 105 7.5E-9 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Pfam PF13193 AMP-binding enzyme C-terminal domain 860 933 2.9E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SUPERFAMILY SSF47336 1982 2056 1.7E-17 T 12-10-2018 IPR036736 ACP-like superfamily PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Pfam PF00668 Condensation domain 1057 1458 9.4E-41 T 12-10-2018 IPR001242 Condensation domain PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Pfam PF00668 Condensation domain 7 430 4.1E-55 T 12-10-2018 IPR001242 Condensation domain PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:3.40.50.12780 440 844 1.2E-139 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:3.30.300.30 847 946 5.5E-30 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:3.40.50.12780 1469 1871 1.1E-115 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:3.30.559.10 9 202 7.3E-31 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 ProSitePatterns PS00012 Phosphopantetheine attachment site. 980 995 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SUPERFAMILY SSF56801 1472 2001 1.44E-129 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1617 1628 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SUPERFAMILY SSF56801 413 969 1.31E-156 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:1.10.1200.10 947 1023 1.0E-22 T 12-10-2018 IPR036736 ACP-like superfamily PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:1.10.1200.10 1978 2062 9.4E-22 T 12-10-2018 IPR036736 ACP-like superfamily PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Pfam PF00501 AMP-binding enzyme 451 852 1.4E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Pfam PF00501 AMP-binding enzyme 1481 1877 6.3E-81 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:3.30.300.30 1872 1977 6.9E-25 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SUPERFAMILY SSF52777 1227 1458 6.78E-35 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SUPERFAMILY SSF53474 2056 2341 3.69E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Pfam PF00550 Phosphopantetheine attachment site 1992 2055 2.2E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Pfam PF00550 Phosphopantetheine attachment site 958 1020 5.4E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SMART SM00823 Phosphopantetheine attachment site 956 1024 0.0026 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SMART SM00823 Phosphopantetheine attachment site 1987 2059 3.6E-6 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Pfam PF00975 Thioesterase domain 2078 2337 2.5E-32 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SUPERFAMILY SSF47336 949 1020 6.41E-17 T 12-10-2018 IPR036736 ACP-like superfamily PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SUPERFAMILY SSF52777 1045 1238 1.78E-25 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 ProSitePatterns PS00455 Putative AMP-binding domain signature. 591 602 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 473 876 4.2E-135 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1502 1894 1.2E-108 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:3.30.559.10 1041 1224 2.9E-30 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SUPERFAMILY SSF52777 9 167 3.11E-25 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:3.30.559.30 208 422 8.3E-37 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:3.30.559.30 1226 1468 1.9E-36 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 SUPERFAMILY SSF52777 186 436 7.23E-37 T 12-10-2018 PA257_1949 eba49e5dbfa5e804591d59d240aba155 2352 Gene3D G3DSA:3.40.50.1820 2067 2346 2.9E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3486 c0e86503729fff6606cdb5a31c1a4772 779 PRINTS PR00702 Acriflavin resistance protein family signature 660 684 2.2E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3486 c0e86503729fff6606cdb5a31c1a4772 779 PRINTS PR00702 Acriflavin resistance protein family signature 608 631 2.2E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3486 c0e86503729fff6606cdb5a31c1a4772 779 PRINTS PR00702 Acriflavin resistance protein family signature 315 339 2.2E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3486 c0e86503729fff6606cdb5a31c1a4772 779 PRINTS PR00702 Acriflavin resistance protein family signature 735 758 2.2E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_3486 c0e86503729fff6606cdb5a31c1a4772 779 Pfam PF03176 MMPL family 563 769 7.4E-16 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 PA257_3486 c0e86503729fff6606cdb5a31c1a4772 779 Pfam PF03176 MMPL family 150 401 9.2E-8 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 PA257_3486 c0e86503729fff6606cdb5a31c1a4772 779 Gene3D G3DSA:1.20.1640.10 198 385 1.5E-9 T 12-10-2018 PA257_3486 c0e86503729fff6606cdb5a31c1a4772 779 Gene3D G3DSA:1.20.1640.10 584 770 1.0E-13 T 12-10-2018 PA257_3486 c0e86503729fff6606cdb5a31c1a4772 779 SUPERFAMILY SSF82866 183 371 3.92E-28 T 12-10-2018 PA257_3486 c0e86503729fff6606cdb5a31c1a4772 779 SUPERFAMILY SSF82866 563 766 1.31E-33 T 12-10-2018 PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 SUPERFAMILY SSF56003 320 744 4.07E-115 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 SMART SM01008 204 290 7.7E-21 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 Gene3D G3DSA:3.30.365.10 321 550 5.1E-43 T 12-10-2018 PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 Gene3D G3DSA:3.90.1170.50 188 289 3.6E-12 T 12-10-2018 PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 598 673 2.6E-14 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 40 167 2.3E-22 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 321 590 4.7E-27 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 PIRSF PIRSF036389 1 742 1.0E-247 T 12-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 Gene3D G3DSA:3.30.365.10 38 175 2.8E-35 T 12-10-2018 PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 Gene3D G3DSA:3.30.365.10 342 433 5.1E-43 T 12-10-2018 PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 SUPERFAMILY SSF56003 6 235 9.16E-39 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PA257_4181 b2b3143b45e2f2c47809f9b513671e8f 748 Gene3D G3DSA:3.30.365.10 594 747 3.4E-42 T 12-10-2018 PA257_3184 027b5c662964f4f73520d400d745d8bb 959 SUPERFAMILY SSF53383 466 952 2.3E-107 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3184 027b5c662964f4f73520d400d745d8bb 959 Gene3D G3DSA:3.90.1150.10 766 904 1.7E-42 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_3184 027b5c662964f4f73520d400d745d8bb 959 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 21 950 0.0 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PA257_3184 027b5c662964f4f73520d400d745d8bb 959 SUPERFAMILY SSF53383 21 446 4.65E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3184 027b5c662964f4f73520d400d745d8bb 959 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 12 956 26.213 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PA257_3184 027b5c662964f4f73520d400d745d8bb 959 Pfam PF02347 Glycine cleavage system P-protein 21 444 8.1E-181 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PA257_3184 027b5c662964f4f73520d400d745d8bb 959 Pfam PF02347 Glycine cleavage system P-protein 483 743 5.7E-10 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PA257_3184 027b5c662964f4f73520d400d745d8bb 959 Gene3D G3DSA:3.40.640.10 529 757 2.8E-62 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_3184 027b5c662964f4f73520d400d745d8bb 959 Gene3D G3DSA:3.40.640.10 100 359 7.2E-103 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6893 62d861ab1c898fc380621a8c859293b0 215 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 19 202 27.038 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 PA257_6893 62d861ab1c898fc380621a8c859293b0 215 Pfam PF01926 50S ribosome-binding GTPase 33 150 3.2E-17 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_6893 62d861ab1c898fc380621a8c859293b0 215 SUPERFAMILY SSF52540 22 202 4.32E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6893 62d861ab1c898fc380621a8c859293b0 215 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 14 198 2.9E-69 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 PA257_6893 62d861ab1c898fc380621a8c859293b0 215 Gene3D G3DSA:3.40.50.300 10 210 4.5E-48 T 12-10-2018 PA257_2879 1e5e967c2890665ddc91fe3fb8eaa42d 141 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 6.6E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2879 1e5e967c2890665ddc91fe3fb8eaa42d 141 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 SUPERFAMILY SSF50494 107 330 1.01E-24 T 12-10-2018 IPR009003 Peptidase S1, PA clan PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 Gene3D G3DSA:2.40.10.10 225 322 4.5E-12 T 12-10-2018 PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 Pfam PF13365 Trypsin-like peptidase domain 134 308 2.0E-17 T 12-10-2018 PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 Pfam PF01223 DNA/RNA non-specific endonuclease 390 603 4.0E-51 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 SMART SM00477 397 604 1.2E-14 T 12-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 PRINTS PR00839 V8 serine protease family signature 282 298 9.4E-11 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 PRINTS PR00839 V8 serine protease family signature 134 151 9.4E-11 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 PRINTS PR00839 V8 serine protease family signature 300 312 9.4E-11 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 SMART SM00892 396 604 4.5E-57 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 SUPERFAMILY SSF54060 386 601 2.41E-45 T 12-10-2018 PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 Gene3D G3DSA:2.40.10.10 134 224 4.5E-12 T 12-10-2018 PA257_4468 3f5d2e99b95507b37fbb49a6a069119f 642 Gene3D G3DSA:3.40.570.10 381 607 7.4E-39 T 12-10-2018 PA257_4147 4e5e3021d7da7a7858b74bc3f401a615 183 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 179 1.8E-56 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PA257_4147 4e5e3021d7da7a7858b74bc3f401a615 183 Pfam PF02669 K+-transporting ATPase, c chain 6 178 2.3E-61 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PA257_4147 4e5e3021d7da7a7858b74bc3f401a615 183 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 181 32.721 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PA257_4147 4e5e3021d7da7a7858b74bc3f401a615 183 PIRSF PIRSF001296 1 183 8.0E-64 T 12-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PA257_3795 a86c5a02f79dc895d97efd55148bdcbc 510 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_3795 a86c5a02f79dc895d97efd55148bdcbc 510 Gene3D G3DSA:3.40.50.300 264 503 4.0E-40 T 12-10-2018 PA257_3795 a86c5a02f79dc895d97efd55148bdcbc 510 Gene3D G3DSA:3.40.50.300 6 243 6.5E-49 T 12-10-2018 PA257_3795 a86c5a02f79dc895d97efd55148bdcbc 510 Pfam PF00005 ABC transporter 273 428 2.4E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3795 a86c5a02f79dc895d97efd55148bdcbc 510 SUPERFAMILY SSF52540 271 488 9.01E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3795 a86c5a02f79dc895d97efd55148bdcbc 510 SMART SM00382 32 221 5.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3795 a86c5a02f79dc895d97efd55148bdcbc 510 SMART SM00382 281 476 4.8E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3795 a86c5a02f79dc895d97efd55148bdcbc 510 Pfam PF00005 ABC transporter 24 173 2.8E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3795 a86c5a02f79dc895d97efd55148bdcbc 510 SUPERFAMILY SSF52540 7 231 1.81E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 Gene3D G3DSA:3.50.50.60 245 361 9.4E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 TIGRFAM TIGR02053 MerA: mercury(II) reductase 100 561 5.7E-189 T 12-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 133 143 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 418 2.6E-64 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 Gene3D G3DSA:3.50.50.60 102 419 9.4E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 PRINTS PR00945 Mercuric reductase class II signature 237 254 2.8E-93 T 12-10-2018 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 PRINTS PR00945 Mercuric reductase class II signature 534 553 2.8E-93 T 12-10-2018 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 PRINTS PR00945 Mercuric reductase class II signature 292 307 2.8E-93 T 12-10-2018 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 PRINTS PR00945 Mercuric reductase class II signature 110 128 2.8E-93 T 12-10-2018 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 PRINTS PR00945 Mercuric reductase class II signature 13 23 2.8E-93 T 12-10-2018 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 PRINTS PR00945 Mercuric reductase class II signature 272 289 2.8E-93 T 12-10-2018 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 PRINTS PR00945 Mercuric reductase class II signature 145 164 2.8E-93 T 12-10-2018 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 PRINTS PR00945 Mercuric reductase class II signature 469 489 2.8E-93 T 12-10-2018 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 PIRSF PIRSF000350 1 561 7.7E-266 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 SUPERFAMILY SSF51905 98 427 2.21E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 Pfam PF00403 Heavy-metal-associated domain 5 62 9.5E-10 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 SUPERFAMILY SSF55008 2 68 1.7E-17 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 SUPERFAMILY SSF55424 436 559 2.58E-33 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 Gene3D G3DSA:3.30.70.100 1 69 4.3E-21 T 12-10-2018 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 437 545 1.4E-29 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PA257_5258 5c4767a1b8509446523ac3c8e06568ba 561 Gene3D G3DSA:3.30.390.30 436 561 4.1E-47 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_3953 f7666ac805e1eceeafbb1cc1791bedc5 265 Gene3D G3DSA:3.40.50.720 1 265 4.5E-65 T 12-10-2018 PA257_3953 f7666ac805e1eceeafbb1cc1791bedc5 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 255 1.6E-83 T 12-10-2018 PA257_3953 f7666ac805e1eceeafbb1cc1791bedc5 265 PIRSF PIRSF000094 1 263 1.4E-109 T 12-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_3953 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3953 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3953 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3953 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3953 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3953 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3953 f7666ac805e1eceeafbb1cc1791bedc5 265 SUPERFAMILY SSF51735 6 255 1.36E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 60 191 7.7E-17 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 332 614 3.9E-28 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 628 709 9.2E-15 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 SMART SM01008 223 312 4.6E-24 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 36 2.4E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Gene3D G3DSA:3.30.365.10 364 456 8.9E-47 T 12-10-2018 PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 SUPERFAMILY SSF56003 334 762 1.57E-111 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Gene3D G3DSA:3.90.1170.50 194 306 1.7E-10 T 12-10-2018 PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Gene3D G3DSA:3.30.365.10 340 563 8.9E-47 T 12-10-2018 PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 PIRSF PIRSF036389 4 769 1.3E-281 T 12-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Gene3D G3DSA:3.30.365.10 618 765 5.8E-37 T 12-10-2018 PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Gene3D G3DSA:3.30.365.10 56 193 4.8E-24 T 12-10-2018 PA257_3262 5e9fe1cf8ff88af91180dd8a9e8de51b 771 SUPERFAMILY SSF56003 12 256 5.93E-47 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PA257_0611 bcbcaf88c8bff2fe1f78462f2a9fdc7e 797 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 151 796 1.4E-122 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_0611 bcbcaf88c8bff2fe1f78462f2a9fdc7e 797 SMART SM00965 57 108 6.3E-8 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_0611 bcbcaf88c8bff2fe1f78462f2a9fdc7e 797 Pfam PF00593 TonB dependent receptor 322 796 7.4E-63 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_0611 bcbcaf88c8bff2fe1f78462f2a9fdc7e 797 Pfam PF07715 TonB-dependent Receptor Plug Domain 151 248 2.1E-18 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_0611 bcbcaf88c8bff2fe1f78462f2a9fdc7e 797 Gene3D G3DSA:3.55.50.30 27 126 2.4E-19 T 12-10-2018 PA257_0611 bcbcaf88c8bff2fe1f78462f2a9fdc7e 797 SUPERFAMILY SSF56935 111 797 3.53E-139 T 12-10-2018 PA257_0611 bcbcaf88c8bff2fe1f78462f2a9fdc7e 797 Gene3D G3DSA:2.170.130.10 127 258 2.9E-32 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_0611 bcbcaf88c8bff2fe1f78462f2a9fdc7e 797 Gene3D G3DSA:2.40.170.20 259 797 6.7E-141 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_6516 8388b8d68c36934f24f53741babb4723 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 9.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6516 8388b8d68c36934f24f53741babb4723 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 577 9.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6516 8388b8d68c36934f24f53741babb4723 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 9.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6516 8388b8d68c36934f24f53741babb4723 612 SUPERFAMILY SSF103190 68 203 2.35E-19 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily PA257_6516 8388b8d68c36934f24f53741babb4723 612 SUPERFAMILY SSF55874 437 595 9.43E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6516 8388b8d68c36934f24f53741babb4723 612 SMART SM00388 378 446 4.9E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6516 8388b8d68c36934f24f53741babb4723 612 PIRSF PIRSF036431 4 605 5.1E-209 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PA257_6516 8388b8d68c36934f24f53741babb4723 612 Gene3D G3DSA:3.30.450.20 70 191 4.1E-69 T 12-10-2018 PA257_6516 8388b8d68c36934f24f53741babb4723 612 Pfam PF00512 His Kinase A (phospho-acceptor) domain 378 442 1.5E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_6516 8388b8d68c36934f24f53741babb4723 612 Gene3D G3DSA:1.10.287.130 354 441 1.8E-18 T 12-10-2018 PA257_6516 8388b8d68c36934f24f53741babb4723 612 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 490 596 6.4E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6516 8388b8d68c36934f24f53741babb4723 612 Gene3D G3DSA:3.30.450.20 58 276 4.1E-69 T 12-10-2018 PA257_6516 8388b8d68c36934f24f53741babb4723 612 Pfam PF02743 Cache domain 48 276 2.6E-15 T 12-10-2018 IPR033479 Double Cache domain 1 PA257_6516 8388b8d68c36934f24f53741babb4723 612 SMART SM00387 488 599 1.6E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_6516 8388b8d68c36934f24f53741babb4723 612 Gene3D G3DSA:3.30.565.10 447 597 1.7E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_6516 8388b8d68c36934f24f53741babb4723 612 SUPERFAMILY SSF47384 366 442 1.9E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2414 94ad5588f7325537d742a5b7e6ff5085 211 Pfam PF04542 Sigma-70 region 2 49 115 4.1E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_2414 94ad5588f7325537d742a5b7e6ff5085 211 SUPERFAMILY SSF88946 30 132 1.27E-28 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_2414 94ad5588f7325537d742a5b7e6ff5085 211 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 45 204 1.1E-27 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_2414 94ad5588f7325537d742a5b7e6ff5085 211 Gene3D G3DSA:1.10.1740.10 23 141 8.3E-28 T 12-10-2018 PA257_2414 94ad5588f7325537d742a5b7e6ff5085 211 Gene3D G3DSA:1.10.10.10 145 207 4.1E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2414 94ad5588f7325537d742a5b7e6ff5085 211 Pfam PF08281 Sigma-70, region 4 149 201 5.4E-11 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_2414 94ad5588f7325537d742a5b7e6ff5085 211 SUPERFAMILY SSF88659 132 207 1.29E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Gene3D G3DSA:3.90.930.1 691 786 3.9E-10 T 12-10-2018 PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Gene3D G3DSA:3.90.930.1 787 926 1.3E-17 T 12-10-2018 PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1369 1445 1.7E-28 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Gene3D G3DSA:2.180.10.10 1195 1445 4.0E-38 T 12-10-2018 PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Gene3D G3DSA:3.90.930.1 933 1051 5.1E-6 T 12-10-2018 PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 SUPERFAMILY SSF69304 1088 1342 6.02E-6 T 12-10-2018 PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Pfam PF03527 RHS protein 1344 1376 1.0E-13 T 12-10-2018 IPR001826 RHS protein PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 SUPERFAMILY SSF69304 671 975 7.59E-10 T 12-10-2018 PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Pfam PF05593 RHS Repeat 905 942 8.0E-5 T 12-10-2018 IPR031325 RHS repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Pfam PF05593 RHS Repeat 842 877 1.1E-5 T 12-10-2018 IPR031325 RHS repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Pfam PF05593 RHS Repeat 801 836 1.7E-7 T 12-10-2018 IPR031325 RHS repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Pfam PF05593 RHS Repeat 1017 1049 5.5E-8 T 12-10-2018 IPR031325 RHS repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Pfam PF05593 RHS Repeat 1238 1276 2.2E-5 T 12-10-2018 IPR031325 RHS repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Pfam PF05593 RHS Repeat 739 774 3.7E-7 T 12-10-2018 IPR031325 RHS repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Pfam PF05593 RHS Repeat 870 899 7.4E-5 T 12-10-2018 IPR031325 RHS repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 Pfam PF05593 RHS Repeat 1261 1290 1.3E-4 T 12-10-2018 IPR031325 RHS repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1037 1067 9.8E-5 T 12-10-2018 IPR006530 YD repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 739 766 5.4E-7 T 12-10-2018 IPR006530 YD repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 821 861 2.5E-8 T 12-10-2018 IPR006530 YD repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 791 820 5.9E-4 T 12-10-2018 IPR006530 YD repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1261 1293 1.9E-6 T 12-10-2018 IPR006530 YD repeat PA257_4123 fd94e151753ecce8d0a3dc86ca2726d5 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 863 900 3.8E-7 T 12-10-2018 IPR006530 YD repeat PA257_1998 13cf00c63dcbd80775a28dc3d377ff9a 79 Pfam PF13490 Putative zinc-finger 4 38 3.1E-8 T 12-10-2018 IPR027383 Putative zinc-finger PA257_1998 13cf00c63dcbd80775a28dc3d377ff9a 79 Gene3D G3DSA:1.10.10.1320 6 79 2.1E-6 T 12-10-2018 PA257_5324 eeb7c303bdf47e5b311d2993e811c919 143 Pfam PF11356 Type II secretion system protein C 55 124 5.9E-8 T 12-10-2018 IPR024961 Type II secretion system protein C, N-terminal PA257_5324 eeb7c303bdf47e5b311d2993e811c919 143 Gene3D G3DSA:2.30.30.830 61 128 3.0E-6 T 12-10-2018 PA257_6101 01aef563577d2145a02a89e1b2f0cb31 279 Pfam PF00797 N-acetyltransferase 26 261 2.2E-71 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 PA257_6101 01aef563577d2145a02a89e1b2f0cb31 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 73 95 5.7E-12 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 PA257_6101 01aef563577d2145a02a89e1b2f0cb31 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 25 48 5.7E-12 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 PA257_6101 01aef563577d2145a02a89e1b2f0cb31 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 107 132 5.7E-12 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 PA257_6101 01aef563577d2145a02a89e1b2f0cb31 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 49 72 5.7E-12 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 PA257_6101 01aef563577d2145a02a89e1b2f0cb31 279 SUPERFAMILY SSF54001 3 263 6.48E-75 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_6101 01aef563577d2145a02a89e1b2f0cb31 279 Gene3D G3DSA:3.30.2140.10 11 259 2.5E-96 T 12-10-2018 PA257_6101 01aef563577d2145a02a89e1b2f0cb31 279 Gene3D G3DSA:2.40.128.150 89 187 2.5E-96 T 12-10-2018 PA257_3073 3161de5b2b7b96fc37ab622434691450 408 SUPERFAMILY SSF103473 21 401 1.16E-45 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3073 3161de5b2b7b96fc37ab622434691450 408 Pfam PF07690 Major Facilitator Superfamily 40 357 5.8E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3073 3161de5b2b7b96fc37ab622434691450 408 Gene3D G3DSA:1.20.1250.20 208 397 8.9E-22 T 12-10-2018 PA257_3073 3161de5b2b7b96fc37ab622434691450 408 Gene3D G3DSA:1.20.1250.20 18 204 1.4E-11 T 12-10-2018 PA257_6377 f4b712a1333189190f66fa8ff8afb38f 319 Gene3D G3DSA:3.40.190.290 109 315 5.5E-27 T 12-10-2018 PA257_6377 f4b712a1333189190f66fa8ff8afb38f 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 3.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6377 f4b712a1333189190f66fa8ff8afb38f 319 SUPERFAMILY SSF46785 16 128 7.07E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6377 f4b712a1333189190f66fa8ff8afb38f 319 Pfam PF03466 LysR substrate binding domain 104 309 4.7E-34 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6377 f4b712a1333189190f66fa8ff8afb38f 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 7.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6377 f4b712a1333189190f66fa8ff8afb38f 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 7.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6377 f4b712a1333189190f66fa8ff8afb38f 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 7.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6377 f4b712a1333189190f66fa8ff8afb38f 319 Gene3D G3DSA:1.10.10.10 17 108 1.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6377 f4b712a1333189190f66fa8ff8afb38f 319 SUPERFAMILY SSF53850 106 313 1.76E-28 T 12-10-2018 PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 SUPERFAMILY SSF69279 192 363 5.61E-35 T 12-10-2018 PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 529 552 5.1E-5 T 12-10-2018 IPR010609 Gp5, C-terminal PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 Pfam PF05954 Phage late control gene D protein (GPD) 29 330 1.8E-102 T 12-10-2018 PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 Gene3D G3DSA:3.30.1920.30 224 286 2.0E-135 T 12-10-2018 PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 Gene3D G3DSA:2.30.110.50 14 333 2.0E-135 T 12-10-2018 PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 Gene3D G3DSA:2.40.50.230 355 457 1.8E-49 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 Gene3D G3DSA:3.55.50.10 98 189 2.0E-135 T 12-10-2018 PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 9.2E-200 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 SUPERFAMILY SSF69255 365 452 3.66E-35 T 12-10-2018 PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 SUPERFAMILY SSF69279 11 184 2.0E-62 T 12-10-2018 PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 SUPERFAMILY SSF69349 442 660 1.14E-55 T 12-10-2018 PA257_2866 e90fc80f002f4e0f90440feaf86f07c2 689 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 7.9E-207 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_0574 6f69292a06de9c776097f5c0fb9c8bd4 423 SUPERFAMILY SSF51556 51 370 3.84E-104 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_0574 6f69292a06de9c776097f5c0fb9c8bd4 423 SUPERFAMILY SSF51338 17 406 2.02E-5 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_0574 6f69292a06de9c776097f5c0fb9c8bd4 423 Pfam PF07969 Amidohydrolase family 42 398 1.4E-51 T 12-10-2018 IPR013108 Amidohydrolase 3 PA257_0574 6f69292a06de9c776097f5c0fb9c8bd4 423 Gene3D G3DSA:3.20.20.140 52 359 9.7E-178 T 12-10-2018 PA257_0574 6f69292a06de9c776097f5c0fb9c8bd4 423 Gene3D G3DSA:2.30.40.10 5 405 9.7E-178 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_5579 724644666e54309d42a01c8caf268db2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.9E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_5579 724644666e54309d42a01c8caf268db2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.9E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_5579 724644666e54309d42a01c8caf268db2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.9E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_5579 724644666e54309d42a01c8caf268db2 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.0E-19 T 12-10-2018 PA257_5579 724644666e54309d42a01c8caf268db2 157 SMART SM00344 3 112 5.6E-45 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PA257_5579 724644666e54309d42a01c8caf268db2 157 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 8.8E-23 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PA257_5579 724644666e54309d42a01c8caf268db2 157 SUPERFAMILY SSF46785 2 89 3.27E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5579 724644666e54309d42a01c8caf268db2 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PA257_5579 724644666e54309d42a01c8caf268db2 157 Gene3D G3DSA:1.10.10.10 4 54 3.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5579 724644666e54309d42a01c8caf268db2 157 Gene3D G3DSA:3.30.70.920 56 140 2.3E-26 T 12-10-2018 PA257_5579 724644666e54309d42a01c8caf268db2 157 SUPERFAMILY SSF54909 63 152 1.47E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_5913 92f3e68393dc858965b390dabab0acd1 520 Gene3D G3DSA:3.40.50.300 335 518 4.4E-31 T 12-10-2018 PA257_5913 92f3e68393dc858965b390dabab0acd1 520 Pfam PF01636 Phosphotransferase enzyme family 123 279 1.0E-5 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase PA257_5913 92f3e68393dc858965b390dabab0acd1 520 SUPERFAMILY SSF56112 12 294 4.96E-24 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_5913 92f3e68393dc858965b390dabab0acd1 520 SUPERFAMILY SSF52540 339 516 4.72E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5913 92f3e68393dc858965b390dabab0acd1 520 Pfam PF13671 AAA domain 338 487 1.0E-37 T 12-10-2018 PA257_5913 92f3e68393dc858965b390dabab0acd1 520 Gene3D G3DSA:3.90.1200.10 121 322 4.5E-5 T 12-10-2018 PA257_4947 32bed05dba224338e61ed3085f4272db 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_4947 32bed05dba224338e61ed3085f4272db 488 Gene3D G3DSA:3.40.309.10 249 439 7.6E-153 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_4947 32bed05dba224338e61ed3085f4272db 488 Pfam PF00171 Aldehyde dehydrogenase family 11 462 3.3E-124 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_4947 32bed05dba224338e61ed3085f4272db 488 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 487 4.9E-254 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 PA257_4947 32bed05dba224338e61ed3085f4272db 488 Gene3D G3DSA:3.40.605.10 9 451 7.6E-153 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_4947 32bed05dba224338e61ed3085f4272db 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_4947 32bed05dba224338e61ed3085f4272db 488 SUPERFAMILY SSF53720 4 457 1.01E-124 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_4947 32bed05dba224338e61ed3085f4272db 488 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 3 488 58.754 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 PA257_3056 40e23ec82288886a081e15c9d49510c8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 9.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3056 40e23ec82288886a081e15c9d49510c8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 9.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3056 40e23ec82288886a081e15c9d49510c8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3056 40e23ec82288886a081e15c9d49510c8 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 1.4E-48 T 12-10-2018 PA257_3056 40e23ec82288886a081e15c9d49510c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3056 40e23ec82288886a081e15c9d49510c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3056 40e23ec82288886a081e15c9d49510c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3056 40e23ec82288886a081e15c9d49510c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3056 40e23ec82288886a081e15c9d49510c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3056 40e23ec82288886a081e15c9d49510c8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3056 40e23ec82288886a081e15c9d49510c8 253 SUPERFAMILY SSF51735 7 250 9.58E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3056 40e23ec82288886a081e15c9d49510c8 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_3056 40e23ec82288886a081e15c9d49510c8 253 Gene3D G3DSA:3.40.50.720 1 252 1.7E-67 T 12-10-2018 PA257_5152 b960e766486e4f6d00af3d5f5ce7b112 278 Pfam PF08668 HDOD domain 23 207 2.9E-47 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD PA257_5152 b960e766486e4f6d00af3d5f5ce7b112 278 Gene3D G3DSA:1.10.3210.10 4 275 4.5E-63 T 12-10-2018 PA257_5152 b960e766486e4f6d00af3d5f5ce7b112 278 SUPERFAMILY SSF109604 9 252 1.67E-60 T 12-10-2018 PA257_3175 1e500743400c45ad514b7710d6d49f85 664 SUPERFAMILY SSF50610 441 518 1.05E-23 T 12-10-2018 IPR009004 Transposase, Mu, C-terminal PA257_3175 1e500743400c45ad514b7710d6d49f85 664 Gene3D G3DSA:3.30.420.10 217 452 1.4E-56 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_3175 1e500743400c45ad514b7710d6d49f85 664 SUPERFAMILY SSF53098 229 443 1.07E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_3175 1e500743400c45ad514b7710d6d49f85 664 Gene3D G3DSA:1.10.10.10 1 47 7.4E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3175 1e500743400c45ad514b7710d6d49f85 664 Pfam PF02316 Mu DNA-binding domain 2 99 1.2E-23 T 12-10-2018 IPR003314 Mu-type HTH domain GO:0003677 PA257_3175 1e500743400c45ad514b7710d6d49f85 664 Pfam PF00665 Integrase core domain 248 350 2.4E-14 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_3175 1e500743400c45ad514b7710d6d49f85 664 Gene3D G3DSA:2.30.30.130 461 516 2.7E-6 T 12-10-2018 IPR009004 Transposase, Mu, C-terminal PA257_3175 1e500743400c45ad514b7710d6d49f85 664 SUPERFAMILY SSF46955 1 35 1.37E-5 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_3175 1e500743400c45ad514b7710d6d49f85 664 Pfam PF09299 Mu transposase, C-terminal 456 514 7.4E-19 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal PA257_0530 1e500743400c45ad514b7710d6d49f85 664 SUPERFAMILY SSF50610 441 518 1.05E-23 T 12-10-2018 IPR009004 Transposase, Mu, C-terminal PA257_0530 1e500743400c45ad514b7710d6d49f85 664 Gene3D G3DSA:3.30.420.10 217 452 1.4E-56 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_0530 1e500743400c45ad514b7710d6d49f85 664 SUPERFAMILY SSF53098 229 443 1.07E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_0530 1e500743400c45ad514b7710d6d49f85 664 Gene3D G3DSA:1.10.10.10 1 47 7.4E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0530 1e500743400c45ad514b7710d6d49f85 664 Pfam PF02316 Mu DNA-binding domain 2 99 1.2E-23 T 12-10-2018 IPR003314 Mu-type HTH domain GO:0003677 PA257_0530 1e500743400c45ad514b7710d6d49f85 664 Pfam PF00665 Integrase core domain 248 350 2.4E-14 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_0530 1e500743400c45ad514b7710d6d49f85 664 Gene3D G3DSA:2.30.30.130 461 516 2.7E-6 T 12-10-2018 IPR009004 Transposase, Mu, C-terminal PA257_0530 1e500743400c45ad514b7710d6d49f85 664 SUPERFAMILY SSF46955 1 35 1.37E-5 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_0530 1e500743400c45ad514b7710d6d49f85 664 Pfam PF09299 Mu transposase, C-terminal 456 514 7.4E-19 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 140 153 1.7E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 164 192 1.7E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 216 233 1.7E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 234 250 1.7E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 325 351 1.7E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 487 90.04 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 Gene3D G3DSA:3.40.50.720 12 435 1.8E-164 T 12-10-2018 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 SUPERFAMILY SSF51735 7 187 8.86E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 174 180 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 8 485 4.6E-174 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 Gene3D G3DSA:3.30.360.10 174 473 1.8E-164 T 12-10-2018 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 184 1.0E-52 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 SUPERFAMILY SSF55347 179 486 4.58E-114 T 12-10-2018 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 187 485 1.6E-116 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_2117 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PIRSF PIRSF000110 2 488 1.7E-170 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PA257_3942 970fcfd473d629b34eb2bfc566ad1465 107 Gene3D G3DSA:3.10.450.50 1 107 2.3E-31 T 12-10-2018 PA257_3942 970fcfd473d629b34eb2bfc566ad1465 107 Pfam PF12680 SnoaL-like domain 10 92 2.2E-13 T 12-10-2018 IPR037401 SnoaL-like domain PA257_3942 970fcfd473d629b34eb2bfc566ad1465 107 SUPERFAMILY SSF54427 1 105 3.26E-31 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_4885 dcfd15182c6317dd4413529dc9b592f3 118 Gene3D G3DSA:3.40.30.10 1 117 7.9E-25 T 12-10-2018 PA257_4885 dcfd15182c6317dd4413529dc9b592f3 118 Pfam PF00578 AhpC/TSA family 2 96 9.6E-16 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_4885 dcfd15182c6317dd4413529dc9b592f3 118 SUPERFAMILY SSF52833 2 117 2.25E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4885 dcfd15182c6317dd4413529dc9b592f3 118 ProSitePatterns PS00194 Thioredoxin family active site. 7 25 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 Gene3D G3DSA:3.40.50.300 187 352 3.0E-37 T 12-10-2018 PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 SUPERFAMILY SSF52540 187 343 1.31E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 SMART SM00382 210 348 4.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 SUPERFAMILY SSF54211 8 169 2.84E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 344 2.2E-71 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 Gene3D G3DSA:3.30.230.10 23 168 9.8E-11 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.8E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 7.8E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 7.8E-6 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.3E-43 T 12-10-2018 PA257_6647 4e44d8b95c8062be6582096c7632f79e 357 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 344 1.6E-138 T 12-10-2018 IPR004482 Mg chelatase-related protein PA257_0944 d2edbf89e71f49bb2773ed32f9369425 324 SUPERFAMILY SSF52518 4 324 7.86E-102 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_0944 d2edbf89e71f49bb2773ed32f9369425 324 Gene3D G3DSA:3.40.50.970 1 324 1.1E-124 T 12-10-2018 PA257_0944 d2edbf89e71f49bb2773ed32f9369425 324 Pfam PF00676 Dehydrogenase E1 component 16 312 5.0E-98 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 PA257_2688 41fc19c67b7c43234a3c699032f16ad7 264 SUPERFAMILY SSF51306 167 258 4.88E-12 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_2688 41fc19c67b7c43234a3c699032f16ad7 264 Pfam PF00717 Peptidase S24-like 180 241 1.2E-4 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_5081 31817b548fbfded1a40c281c0072825f 103 Pfam PF05154 TM2 domain 9 67 2.5E-18 T 12-10-2018 IPR007829 TM2 domain PA257_4895 0e78dd603067be345b4aa32f85eeb7aa 222 Pfam PF00551 Formyl transferase 6 184 1.8E-66 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_4895 0e78dd603067be345b4aa32f85eeb7aa 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 191 32.7 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 PA257_4895 0e78dd603067be345b4aa32f85eeb7aa 222 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 137 160 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_4895 0e78dd603067be345b4aa32f85eeb7aa 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 194 2.3E-78 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 PA257_4895 0e78dd603067be345b4aa32f85eeb7aa 222 SUPERFAMILY SSF53328 6 204 7.72E-67 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_4895 0e78dd603067be345b4aa32f85eeb7aa 222 Gene3D G3DSA:3.40.50.170 5 216 1.1E-87 T 12-10-2018 PA257_0227 644ea240675ace2dce7955feaba503f7 270 Gene3D G3DSA:3.30.1150.10 169 270 2.5E-25 T 12-10-2018 PA257_0227 644ea240675ace2dce7955feaba503f7 270 SUPERFAMILY SSF74653 156 270 3.24E-25 T 12-10-2018 PA257_0227 644ea240675ace2dce7955feaba503f7 270 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 191 269 5.3E-24 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 PA257_0227 644ea240675ace2dce7955feaba503f7 270 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 193 270 1.2E-25 T 12-10-2018 IPR006260 TonB/TolA, C-terminal PA257_0227 644ea240675ace2dce7955feaba503f7 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 130 140 1.1E-8 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PA257_0227 644ea240675ace2dce7955feaba503f7 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 187 208 1.1E-8 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PA257_0227 644ea240675ace2dce7955feaba503f7 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 208 226 1.1E-8 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PA257_6081 5a88ba42cfc272a352a99b3d66bb88cd 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 16 304 3.2E-97 T 12-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PA257_6081 5a88ba42cfc272a352a99b3d66bb88cd 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 306 1.5E-153 T 12-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PA257_6081 5a88ba42cfc272a352a99b3d66bb88cd 309 PIRSF PIRSF018296 1 309 1.9E-112 T 12-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PA257_6081 5a88ba42cfc272a352a99b3d66bb88cd 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 307 42.32 T 12-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PA257_6081 5a88ba42cfc272a352a99b3d66bb88cd 309 SUPERFAMILY SSF144020 20 307 7.98E-88 T 12-10-2018 IPR024064 FdhE-like superfamily PA257_6081 5a88ba42cfc272a352a99b3d66bb88cd 309 Gene3D G3DSA:3.90.1670.10 19 309 1.1E-115 T 12-10-2018 IPR024064 FdhE-like superfamily PA257_1519 087760568c818690e0aae6f6ab5689f0 347 Gene3D G3DSA:3.40.50.2300 1 155 2.2E-35 T 12-10-2018 PA257_1519 087760568c818690e0aae6f6ab5689f0 347 SUPERFAMILY SSF52172 19 151 1.01E-29 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1519 087760568c818690e0aae6f6ab5689f0 347 SMART SM00448 19 133 3.6E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1519 087760568c818690e0aae6f6ab5689f0 347 SMART SM00267 160 337 6.6E-61 T 12-10-2018 IPR000160 GGDEF domain PA257_1519 087760568c818690e0aae6f6ab5689f0 347 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 167 335 6.4E-52 T 12-10-2018 IPR000160 GGDEF domain PA257_1519 087760568c818690e0aae6f6ab5689f0 347 Pfam PF00072 Response regulator receiver domain 21 133 3.6E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1519 087760568c818690e0aae6f6ab5689f0 347 Gene3D G3DSA:3.30.70.270 156 339 4.5E-62 T 12-10-2018 PA257_1519 087760568c818690e0aae6f6ab5689f0 347 Pfam PF00990 Diguanylate cyclase, GGDEF domain 172 333 7.0E-50 T 12-10-2018 IPR000160 GGDEF domain PA257_1519 087760568c818690e0aae6f6ab5689f0 347 SUPERFAMILY SSF55073 176 336 4.94E-49 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_1915 d0ffb275f013fcae8221a721d864d214 342 Pfam PF13515 Fusaric acid resistance protein-like 190 322 1.4E-9 T 12-10-2018 PA257_1915 d0ffb275f013fcae8221a721d864d214 342 PIRSF PIRSF029594 7 342 1.9E-177 T 12-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 PA257_1915 d0ffb275f013fcae8221a721d864d214 342 Pfam PF11168 Protein of unknown function (DUF2955) 14 153 4.4E-48 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 3 434 2.7E-200 T 12-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 SUPERFAMILY SSF49503 503 652 5.97E-36 T 12-10-2018 IPR008972 Cupredoxin PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 Pfam PF00394 Multicopper oxidase 171 346 6.3E-32 T 12-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 31 4.4E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 ProSitePatterns PS00080 Multicopper oxidases signature 2. 635 646 - T 12-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 Gene3D G3DSA:2.60.40.420 42 160 5.3E-38 T 12-10-2018 IPR008972 Cupredoxin PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 Pfam PF07731 Multicopper oxidase 542 655 1.9E-25 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 ProSitePatterns PS00079 Multicopper oxidases signature 1. 630 650 - T 12-10-2018 IPR033138 Multicopper oxidases, conserved site PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 Pfam PF07732 Multicopper oxidase 52 162 2.2E-40 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 Gene3D G3DSA:2.60.40.420 166 370 6.5E-42 T 12-10-2018 IPR008972 Cupredoxin PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 SUPERFAMILY SSF49503 165 380 1.43E-56 T 12-10-2018 IPR008972 Cupredoxin PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 Gene3D G3DSA:2.60.40.420 530 657 2.0E-30 T 12-10-2018 IPR008972 Cupredoxin PA257_3668 ee1a7930639ce35506ac28b0468e730e 658 SUPERFAMILY SSF49503 46 184 5.24E-39 T 12-10-2018 IPR008972 Cupredoxin PA257_2317 1c745eb8e1c5aedfbd64aefdc8290a8f 227 Gene3D G3DSA:3.40.50.300 4 227 2.2E-70 T 12-10-2018 PA257_2317 1c745eb8e1c5aedfbd64aefdc8290a8f 227 SMART SM00382 35 223 1.8E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2317 1c745eb8e1c5aedfbd64aefdc8290a8f 227 Pfam PF00005 ABC transporter 26 174 8.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_2317 1c745eb8e1c5aedfbd64aefdc8290a8f 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 3.4E-98 T 12-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 PA257_2317 1c745eb8e1c5aedfbd64aefdc8290a8f 227 SUPERFAMILY SSF52540 6 225 1.73E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2317 1c745eb8e1c5aedfbd64aefdc8290a8f 227 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4965 53239c734c6b92580bf673e4162968eb 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 2.8E-9 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_4965 53239c734c6b92580bf673e4162968eb 126 SUPERFAMILY SSF54593 1 124 2.69E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4965 53239c734c6b92580bf673e4162968eb 126 Gene3D G3DSA:3.10.180.10 7 125 1.6E-41 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4034 cdb03d4d6c51614e07c8951dabab86c0 332 Gene3D G3DSA:2.120.10.30 31 310 1.5E-15 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PA257_4034 cdb03d4d6c51614e07c8951dabab86c0 332 SUPERFAMILY SSF63829 39 302 7.85E-28 T 12-10-2018 PA257_1674 eae65437ed93f03f672c12b3ab00c495 50 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1674 eae65437ed93f03f672c12b3ab00c495 50 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.3E-7 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1674 eae65437ed93f03f672c12b3ab00c495 50 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.637 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1674 eae65437ed93f03f672c12b3ab00c495 50 Pfam PF00444 Ribosomal protein L36 1 41 1.2E-15 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1674 eae65437ed93f03f672c12b3ab00c495 50 SUPERFAMILY SSF57840 1 41 3.92E-13 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6565 04504c855bffb40408923da65bcf2514 988 SUPERFAMILY SSF53383 49 472 2.04E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6565 04504c855bffb40408923da65bcf2514 988 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 49 980 0.0 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PA257_6565 04504c855bffb40408923da65bcf2514 988 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 40 986 25.746 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PA257_6565 04504c855bffb40408923da65bcf2514 988 Pfam PF02347 Glycine cleavage system P-protein 48 471 4.7E-174 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PA257_6565 04504c855bffb40408923da65bcf2514 988 Gene3D G3DSA:3.40.640.10 128 385 7.3E-103 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6565 04504c855bffb40408923da65bcf2514 988 Gene3D G3DSA:3.90.1150.10 802 933 4.4E-39 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_6565 04504c855bffb40408923da65bcf2514 988 SUPERFAMILY SSF53383 503 981 3.58E-96 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6565 04504c855bffb40408923da65bcf2514 988 Gene3D G3DSA:3.40.640.10 547 801 9.9E-77 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6565 04504c855bffb40408923da65bcf2514 988 Pfam PF01212 Beta-eliminating lyase 576 741 1.1E-4 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 PA257_4550 cc14159267b53260ad6e77cdbc938390 479 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 170 230 1.7E-5 T 12-10-2018 PA257_4550 cc14159267b53260ad6e77cdbc938390 479 Gene3D G3DSA:3.40.390.10 32 264 1.1E-203 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 PA257_4550 cc14159267b53260ad6e77cdbc938390 479 Gene3D G3DSA:2.150.10.10 265 477 1.1E-203 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PA257_4550 cc14159267b53260ad6e77cdbc938390 479 PIRSF PIRSF001205 1 479 2.0E-230 T 12-10-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 PA257_4550 cc14159267b53260ad6e77cdbc938390 479 PRINTS PR00313 NodO calcium binding signature 369 377 3.9E-12 T 12-10-2018 PA257_4550 cc14159267b53260ad6e77cdbc938390 479 PRINTS PR00313 NodO calcium binding signature 339 350 3.9E-12 T 12-10-2018 PA257_4550 cc14159267b53260ad6e77cdbc938390 479 PRINTS PR00313 NodO calcium binding signature 360 368 3.9E-12 T 12-10-2018 PA257_4550 cc14159267b53260ad6e77cdbc938390 479 PRINTS PR00313 NodO calcium binding signature 378 387 3.9E-12 T 12-10-2018 PA257_4550 cc14159267b53260ad6e77cdbc938390 479 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 365 383 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PA257_4550 cc14159267b53260ad6e77cdbc938390 479 Pfam PF08548 Peptidase M10 serralysin C terminal 257 479 4.2E-82 T 12-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 PA257_4550 cc14159267b53260ad6e77cdbc938390 479 SUPERFAMILY SSF51120 256 478 6.41E-48 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PA257_4550 cc14159267b53260ad6e77cdbc938390 479 SUPERFAMILY SSF55486 14 255 7.58E-71 T 12-10-2018 PA257_4550 cc14159267b53260ad6e77cdbc938390 479 SMART SM00235 78 241 4.9E-29 T 12-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 PA257_0866 09b5ed5c15829f0a36154420a842d232 251 Gene3D G3DSA:3.40.50.1820 1 243 3.9E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0866 09b5ed5c15829f0a36154420a842d232 251 SUPERFAMILY SSF53474 5 240 6.1E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0866 09b5ed5c15829f0a36154420a842d232 251 SMART SM00824 Thioesterase 20 236 0.0063 T 12-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 PA257_0866 09b5ed5c15829f0a36154420a842d232 251 Pfam PF00975 Thioesterase domain 18 237 1.6E-60 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 217 452 3.5E-96 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 219 428 2.2E-54 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 Pfam PF14824 Sirohaem biosynthesis protein central 119 144 2.2E-7 T 12-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 297 330 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 Gene3D G3DSA:1.10.8.210 149 210 5.5E-9 T 12-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 Gene3D G3DSA:3.40.50.720 1 112 2.0E-32 T 12-10-2018 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 SUPERFAMILY SSF51735 1 113 1.15E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 Hamap MF_01646 Siroheme synthase [cysG]. 1 461 54.726 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 Gene3D G3DSA:3.30.950.10 333 465 9.5E-51 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 8.2E-89 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 Gene3D G3DSA:3.40.1010.10 215 332 1.2E-47 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 Pfam PF13241 Putative NAD(P)-binding 6 115 5.2E-28 T 12-10-2018 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 Pfam PF10414 Sirohaem synthase dimerisation region 151 207 9.5E-22 T 12-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 PIRSF PIRSF036426 1 465 4.2E-210 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 Gene3D G3DSA:3.30.160.110 113 148 9.3E-19 T 12-10-2018 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 SUPERFAMILY SSF53790 214 459 3.27E-84 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PA257_2945 548de77f06e9ce1348fa0b558bc20bcc 465 SUPERFAMILY SSF75615 114 210 5.36E-28 T 12-10-2018 PA257_1069 f389c14e729deebddc36c5d8059ed049 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1069 f389c14e729deebddc36c5d8059ed049 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 8.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1069 f389c14e729deebddc36c5d8059ed049 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1069 f389c14e729deebddc36c5d8059ed049 229 Pfam PF00106 short chain dehydrogenase 3 190 1.9E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1069 f389c14e729deebddc36c5d8059ed049 229 Gene3D G3DSA:3.40.50.720 1 229 1.3E-54 T 12-10-2018 PA257_1069 f389c14e729deebddc36c5d8059ed049 229 SUPERFAMILY SSF51735 1 229 8.65E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.6E-38 T 12-10-2018 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 1.6E-38 T 12-10-2018 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.6E-38 T 12-10-2018 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.6E-38 T 12-10-2018 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 1.6E-38 T 12-10-2018 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 Gene3D G3DSA:3.50.50.60 9 315 2.9E-121 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 262 9.3E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 9.3E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 9.3E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 9.3E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 9.3E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 9.3E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 9.3E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 9.3E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 9.3E-77 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 SUPERFAMILY SSF51905 2 316 4.13E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2939 6b7016388f61a5c42fda4133eb815950 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 304 2.8E-48 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 Gene3D G3DSA:3.50.50.60 118 247 2.9E-121 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2939 6b7016388f61a5c42fda4133eb815950 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PA257_2939 6b7016388f61a5c42fda4133eb815950 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 316 6.9E-119 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 PA257_0439 ea4ccd4fa4fbce3ec995f968115a0dd3 531 Pfam PF05199 GMC oxidoreductase 384 518 4.7E-22 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PA257_0439 ea4ccd4fa4fbce3ec995f968115a0dd3 531 Gene3D G3DSA:3.50.50.60 32 514 2.7E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0439 ea4ccd4fa4fbce3ec995f968115a0dd3 531 Pfam PF00732 GMC oxidoreductase 32 296 1.2E-48 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_0439 ea4ccd4fa4fbce3ec995f968115a0dd3 531 SUPERFAMILY SSF51905 16 528 6.62E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0439 ea4ccd4fa4fbce3ec995f968115a0dd3 531 Gene3D G3DSA:3.30.560.10 68 464 2.7E-39 T 12-10-2018 PA257_1716 389f4d1ab6f79689ea0a3d056794389e 306 Gene3D G3DSA:3.40.190.10 164 265 1.2E-56 T 12-10-2018 PA257_1716 389f4d1ab6f79689ea0a3d056794389e 306 Gene3D G3DSA:1.10.10.10 2 88 2.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1716 389f4d1ab6f79689ea0a3d056794389e 306 Gene3D G3DSA:3.40.190.10 92 290 1.2E-56 T 12-10-2018 PA257_1716 389f4d1ab6f79689ea0a3d056794389e 306 SUPERFAMILY SSF46785 2 112 3.03E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1716 389f4d1ab6f79689ea0a3d056794389e 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.3E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1716 389f4d1ab6f79689ea0a3d056794389e 306 Pfam PF03466 LysR substrate binding domain 88 294 3.7E-43 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1716 389f4d1ab6f79689ea0a3d056794389e 306 SUPERFAMILY SSF53850 88 299 6.67E-41 T 12-10-2018 PA257_4460 1f2aee1b219055f85589e895a738076b 370 Gene3D G3DSA:3.20.20.70 1 369 8.1E-136 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4460 1f2aee1b219055f85589e895a738076b 370 SUPERFAMILY SSF51395 2 365 3.05E-121 T 12-10-2018 PA257_4460 1f2aee1b219055f85589e895a738076b 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 342 5.8E-89 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PA257_1941 79de19b51447bef38fbfdfb07156a274 270 SUPERFAMILY SSF53335 35 245 1.79E-13 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1941 79de19b51447bef38fbfdfb07156a274 270 Gene3D G3DSA:3.40.50.150 70 257 3.9E-11 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 3.2E-50 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 3.2E-50 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 3.2E-50 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.2E-50 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.2E-50 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 3.2E-50 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 3.2E-50 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.2E-50 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.2E-50 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 464 73.11 T 12-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.9E-30 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 5.9E-30 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 5.9E-30 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 5.9E-30 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.9E-30 T 12-10-2018 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 Gene3D G3DSA:3.30.390.30 343 462 5.8E-31 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 455 5.0E-27 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 PIRSF PIRSF000350 2 459 4.5E-68 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 Gene3D G3DSA:3.50.50.60 157 275 5.2E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 325 1.2E-62 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 Gene3D G3DSA:3.50.50.60 6 332 5.2E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 SUPERFAMILY SSF55424 343 461 5.84E-29 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_2312 1f2b87d6dff7464b8d6387a7da584fe2 464 SUPERFAMILY SSF51905 4 318 3.65E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0913 7bb1b847a5887a7a2133656ae53634a7 547 Gene3D G3DSA:3.40.50.970 1 174 3.2E-60 T 12-10-2018 PA257_0913 7bb1b847a5887a7a2133656ae53634a7 547 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PA257_0913 7bb1b847a5887a7a2133656ae53634a7 547 SUPERFAMILY SSF52518 3 179 2.54E-48 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_0913 7bb1b847a5887a7a2133656ae53634a7 547 SUPERFAMILY SSF52518 356 534 2.95E-58 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_0913 7bb1b847a5887a7a2133656ae53634a7 547 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 7.0E-39 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PA257_0913 7bb1b847a5887a7a2133656ae53634a7 547 Gene3D G3DSA:3.40.50.970 337 537 1.7E-54 T 12-10-2018 PA257_0913 7bb1b847a5887a7a2133656ae53634a7 547 Gene3D G3DSA:3.40.50.1220 181 330 8.7E-35 T 12-10-2018 PA257_0913 7bb1b847a5887a7a2133656ae53634a7 547 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 319 8.1E-30 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PA257_0913 7bb1b847a5887a7a2133656ae53634a7 547 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 169 2.8E-53 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PA257_0913 7bb1b847a5887a7a2133656ae53634a7 547 SUPERFAMILY SSF52467 154 335 1.8E-38 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_4156 27345092a3063f29fd0ad73acfcbad84 424 Gene3D G3DSA:1.20.1250.20 224 413 2.0E-18 T 12-10-2018 PA257_4156 27345092a3063f29fd0ad73acfcbad84 424 Pfam PF07690 Major Facilitator Superfamily 58 373 2.3E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4156 27345092a3063f29fd0ad73acfcbad84 424 Gene3D G3DSA:1.20.1250.20 37 222 8.2E-17 T 12-10-2018 PA257_4156 27345092a3063f29fd0ad73acfcbad84 424 TIGRFAM TIGR00896 CynX: cyanate transporter 42 391 6.8E-135 T 12-10-2018 IPR004747 Cyanate transport system protein GO:0016021 PA257_4156 27345092a3063f29fd0ad73acfcbad84 424 SUPERFAMILY SSF103473 19 412 7.19E-49 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_5020 faf70e1d522bf27ebfbde00aaf833cd7 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 336 1.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_5020 faf70e1d522bf27ebfbde00aaf833cd7 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 320 1.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_5020 faf70e1d522bf27ebfbde00aaf833cd7 339 Gene3D G3DSA:1.10.10.60 234 339 1.7E-23 T 12-10-2018 PA257_5020 faf70e1d522bf27ebfbde00aaf833cd7 339 SMART SM00342 254 336 3.6E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5020 faf70e1d522bf27ebfbde00aaf833cd7 339 SUPERFAMILY SSF46689 289 337 4.18E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5020 faf70e1d522bf27ebfbde00aaf833cd7 339 Pfam PF12833 Helix-turn-helix domain 261 337 6.3E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5020 faf70e1d522bf27ebfbde00aaf833cd7 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 211 2.0E-40 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_6670 0734ad0b5f729f63c68e85d3ada3f864 570 Pfam PF13361 UvrD-like helicase C-terminal domain 487 554 2.1E-6 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PA257_6670 0734ad0b5f729f63c68e85d3ada3f864 570 SUPERFAMILY SSF52540 7 564 1.24E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6670 0734ad0b5f729f63c68e85d3ada3f864 570 Gene3D G3DSA:3.40.50.300 400 570 5.2E-9 T 12-10-2018 PA257_6670 0734ad0b5f729f63c68e85d3ada3f864 570 Pfam PF00580 UvrD/REP helicase N-terminal domain 135 219 5.3E-15 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PA257_6846 2017d48f929be9d08d9529105c6ef5a8 381 Pfam PF00534 Glycosyl transferases group 1 189 345 2.1E-32 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_6846 2017d48f929be9d08d9529105c6ef5a8 381 Gene3D G3DSA:3.40.50.2000 189 349 3.6E-35 T 12-10-2018 PA257_6846 2017d48f929be9d08d9529105c6ef5a8 381 Pfam PF13439 Glycosyltransferase Family 4 15 173 6.8E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PA257_6846 2017d48f929be9d08d9529105c6ef5a8 381 Gene3D G3DSA:3.40.50.2000 1 188 2.5E-23 T 12-10-2018 PA257_6846 2017d48f929be9d08d9529105c6ef5a8 381 SUPERFAMILY SSF53756 1 368 4.32E-74 T 12-10-2018 PA257_0777 365edb70bf8f6e939953297231fbfd85 290 Pfam PF06995 Phage P2 GpU 158 285 8.5E-40 T 12-10-2018 IPR009734 Myoviridae, GpU PA257_0777 365edb70bf8f6e939953297231fbfd85 290 PIRSF PIRSF011237 1 290 7.5E-160 T 12-10-2018 IPR014458 Uncharacterised protein family, phage P2-GpU-fusion PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 SUPERFAMILY SSF48179 287 490 6.46E-61 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 222 234 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 SUPERFAMILY SSF51735 2 286 5.51E-105 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 27 192 7.0E-47 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 Gene3D G3DSA:3.40.50.720 1 285 1.9E-120 T 12-10-2018 PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 PRINTS PR00084 Mannitol dehydrogenase signature 252 267 6.0E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 PRINTS PR00084 Mannitol dehydrogenase signature 222 235 6.0E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 PRINTS PR00084 Mannitol dehydrogenase signature 183 196 6.0E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 PRINTS PR00084 Mannitol dehydrogenase signature 29 39 6.0E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 221 438 2.0E-76 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 PA257_3303 acb35eb8adc3478e75a1bbb7eb0606f3 491 Gene3D G3DSA:1.10.1040.10 286 491 4.4E-75 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_2121 1bbe369818e4a0b600d0da874d4754b2 386 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 116 130 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PA257_2121 1bbe369818e4a0b600d0da874d4754b2 386 Pfam PF00849 RNA pseudouridylate synthase 78 209 6.2E-15 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2121 1bbe369818e4a0b600d0da874d4754b2 386 SMART SM00363 14 76 1.0E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_2121 1bbe369818e4a0b600d0da874d4754b2 386 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 82 244 9.6E-54 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PA257_2121 1bbe369818e4a0b600d0da874d4754b2 386 Gene3D G3DSA:3.10.290.10 12 69 2.5E-20 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PA257_2121 1bbe369818e4a0b600d0da874d4754b2 386 Gene3D G3DSA:3.30.70.580 80 240 2.0E-49 T 12-10-2018 PA257_2121 1bbe369818e4a0b600d0da874d4754b2 386 SUPERFAMILY SSF55120 77 247 2.28E-42 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_2121 1bbe369818e4a0b600d0da874d4754b2 386 Gene3D G3DSA:3.30.70.1560 140 231 2.0E-49 T 12-10-2018 PA257_2121 1bbe369818e4a0b600d0da874d4754b2 386 Pfam PF01479 S4 domain 15 59 2.0E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_2121 1bbe369818e4a0b600d0da874d4754b2 386 SUPERFAMILY SSF55174 13 106 5.05E-14 T 12-10-2018 PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 Gene3D G3DSA:4.10.860.10 626 669 4.1E-15 T 12-10-2018 PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 Pfam PF02151 UvrB/uvrC motif 632 665 3.8E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 Pfam PF00271 Helicase conserved C-terminal domain 435 542 4.6E-17 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 SUPERFAMILY SSF52540 36 581 1.61E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 Gene3D G3DSA:3.40.50.300 413 594 7.4E-51 T 12-10-2018 PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 Pfam PF12344 Ultra-violet resistance protein B 550 592 2.1E-22 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 SMART SM00490 458 544 8.3E-19 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 SUPERFAMILY SSF46600 626 667 1.7E-11 T 12-10-2018 IPR036876 UVR domain superfamily PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 664 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 SUPERFAMILY SSF52540 2 413 9.98E-139 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 666 43.739 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 Pfam PF04851 Type III restriction enzyme, res subunit 11 118 5.8E-9 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 Gene3D G3DSA:3.40.50.300 264 412 4.3E-50 T 12-10-2018 PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 Gene3D G3DSA:3.40.50.300 1 233 9.1E-74 T 12-10-2018 PA257_2154 0b2dcac1478da7b1b975d99c4835f401 670 SMART SM00487 8 424 3.8E-30 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_2744 d53f31d74b600643fd03b84a695f3a92 155 SUPERFAMILY SSF55781 12 146 1.85E-13 T 12-10-2018 PA257_2744 d53f31d74b600643fd03b84a695f3a92 155 Pfam PF13185 GAF domain 60 142 4.3E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_2744 d53f31d74b600643fd03b84a695f3a92 155 Gene3D G3DSA:3.30.450.40 1 151 1.4E-11 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_0736 685ebc3fd602a78c3aaeadb4d83ee3fa 640 SMART SM00763 19 376 6.7E-221 T 12-10-2018 IPR013153 PrkA AAA domain PA257_0736 685ebc3fd602a78c3aaeadb4d83ee3fa 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.1E-74 T 12-10-2018 IPR010650 PrkA C-terminal domain PA257_0736 685ebc3fd602a78c3aaeadb4d83ee3fa 640 Pfam PF08298 PrkA AAA domain 20 376 1.4E-180 T 12-10-2018 IPR013153 PrkA AAA domain PA257_0736 685ebc3fd602a78c3aaeadb4d83ee3fa 640 PIRSF PIRSF000549 1 640 8.5E-289 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 PA257_0736 685ebc3fd602a78c3aaeadb4d83ee3fa 640 SUPERFAMILY SSF52540 75 343 1.05E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2860 d698d00932e6913ad0a55e78513c61bb 401 SUPERFAMILY SSF51905 2 331 5.05E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2860 d698d00932e6913ad0a55e78513c61bb 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 3.7E-5 T 12-10-2018 PA257_2860 d698d00932e6913ad0a55e78513c61bb 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 3.7E-5 T 12-10-2018 PA257_2860 d698d00932e6913ad0a55e78513c61bb 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.7E-5 T 12-10-2018 PA257_2860 d698d00932e6913ad0a55e78513c61bb 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 313 2.9E-39 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_2860 d698d00932e6913ad0a55e78513c61bb 401 Gene3D G3DSA:3.50.50.100 1 373 8.4E-74 T 12-10-2018 PA257_2860 d698d00932e6913ad0a55e78513c61bb 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.8E-10 T 12-10-2018 PA257_2860 d698d00932e6913ad0a55e78513c61bb 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 2.8E-10 T 12-10-2018 PA257_2860 d698d00932e6913ad0a55e78513c61bb 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.8E-10 T 12-10-2018 PA257_2860 d698d00932e6913ad0a55e78513c61bb 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.8E-10 T 12-10-2018 PA257_3085 c0e4cd7cee5acec017cada192305d85d 254 SMART SM00342 164 246 1.1E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3085 c0e4cd7cee5acec017cada192305d85d 254 SUPERFAMILY SSF46689 201 247 2.6E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3085 c0e4cd7cee5acec017cada192305d85d 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_3085 c0e4cd7cee5acec017cada192305d85d 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 246 7.4E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_3085 c0e4cd7cee5acec017cada192305d85d 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 230 7.4E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_3085 c0e4cd7cee5acec017cada192305d85d 254 Pfam PF12833 Helix-turn-helix domain 170 246 6.4E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3085 c0e4cd7cee5acec017cada192305d85d 254 Gene3D G3DSA:1.10.10.60 148 252 1.6E-21 T 12-10-2018 PA257_3085 c0e4cd7cee5acec017cada192305d85d 254 Pfam PF02311 AraC-like ligand binding domain 18 79 6.4E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_3085 c0e4cd7cee5acec017cada192305d85d 254 SUPERFAMILY SSF51182 20 212 9.78E-14 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4240 dcf64c2e19987f934f97f95243b89b51 69 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 3 45 1.1E-21 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type PA257_4240 dcf64c2e19987f934f97f95243b89b51 69 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 2.9E-17 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type PA257_1368 514de07da0f16e93c832edbf1907d033 380 SMART SM00564 187 218 180.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_1368 514de07da0f16e93c832edbf1907d033 380 SMART SM00564 101 133 0.04 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_1368 514de07da0f16e93c832edbf1907d033 380 SMART SM00564 142 173 3.7 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_1368 514de07da0f16e93c832edbf1907d033 380 SMART SM00564 317 348 220.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_1368 514de07da0f16e93c832edbf1907d033 380 SMART SM00564 238 269 14.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_1368 514de07da0f16e93c832edbf1907d033 380 SMART SM00564 62 93 0.0015 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PA257_1368 514de07da0f16e93c832edbf1907d033 380 Gene3D G3DSA:2.130.10.10 16 380 6.0E-113 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_1368 514de07da0f16e93c832edbf1907d033 380 Pfam PF13360 PQQ-like domain 75 305 9.8E-51 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat PA257_1368 514de07da0f16e93c832edbf1907d033 380 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 5 377 7.0E-140 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB PA257_1368 514de07da0f16e93c832edbf1907d033 380 SUPERFAMILY SSF50998 29 369 1.37E-77 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PA257_1368 514de07da0f16e93c832edbf1907d033 380 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 379 39.532 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB PA257_1891 740062ae963038aed0a7a06e2cd0f728 264 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 263 1.5E-92 T 12-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 PA257_1891 740062ae963038aed0a7a06e2cd0f728 264 SUPERFAMILY SSF161098 67 258 1.13E-34 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1891 740062ae963038aed0a7a06e2cd0f728 264 Gene3D G3DSA:1.10.3720.10 65 262 5.5E-32 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1891 740062ae963038aed0a7a06e2cd0f728 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 263 7.1E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 Gene3D G3DSA:1.10.10.60 159 264 4.8E-30 T 12-10-2018 PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 Pfam PF12833 Helix-turn-helix domain 181 257 1.7E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 Gene3D G3DSA:3.30.450.20 23 153 1.1E-19 T 12-10-2018 PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 SUPERFAMILY SSF46689 214 260 1.25E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 Pfam PF08448 PAS fold 40 147 1.5E-19 T 12-10-2018 IPR013656 PAS fold-4 PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 SMART SM00342 174 256 8.0E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.6E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.6E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 SUPERFAMILY SSF55785 27 146 1.29E-13 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4538 1b0d43e25565e4159f2e7c98159fe943 265 SUPERFAMILY SSF46689 158 207 8.78E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6739 e3804477997e34626629aecd705085ad 55 Gene3D G3DSA:2.20.28.10 1 55 4.9E-29 T 12-10-2018 PA257_6739 e3804477997e34626629aecd705085ad 55 SUPERFAMILY SSF57802 1 53 6.73E-23 T 12-10-2018 PA257_6739 e3804477997e34626629aecd705085ad 55 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 12-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 PA257_6739 e3804477997e34626629aecd705085ad 55 Pfam PF00301 Rubredoxin 3 49 2.7E-23 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 PA257_6739 e3804477997e34626629aecd705085ad 55 PIRSF PIRSF000071 1 55 6.7E-25 T 12-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 PA257_6739 e3804477997e34626629aecd705085ad 55 PRINTS PR00163 Rubredoxin signature 3 19 5.7E-9 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 PA257_6739 e3804477997e34626629aecd705085ad 55 PRINTS PR00163 Rubredoxin signature 33 49 5.7E-9 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 PA257_5510 8d49de4ffc9ce6e1db406f1dd145acdb 305 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 260 2.3E-67 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 PA257_5510 8d49de4ffc9ce6e1db406f1dd145acdb 305 Gene3D G3DSA:3.40.50.620 6 211 2.1E-68 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_5510 8d49de4ffc9ce6e1db406f1dd145acdb 305 SUPERFAMILY SSF52402 5 209 1.65E-77 T 12-10-2018 PA257_5510 8d49de4ffc9ce6e1db406f1dd145acdb 305 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 8 305 3.7E-159 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PA257_5510 8d49de4ffc9ce6e1db406f1dd145acdb 305 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 3 305 56.959 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PA257_5510 8d49de4ffc9ce6e1db406f1dd145acdb 305 PIRSF PIRSF002936 1 305 1.5E-155 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PA257_6062 fabc27c43f11f7a0d74abc0110e3f40f 249 Pfam PF13489 Methyltransferase domain 31 159 6.0E-15 T 12-10-2018 PA257_6062 fabc27c43f11f7a0d74abc0110e3f40f 249 Gene3D G3DSA:3.40.50.150 8 249 1.6E-61 T 12-10-2018 PA257_6062 fabc27c43f11f7a0d74abc0110e3f40f 249 SUPERFAMILY SSF53335 4 247 3.19E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6062 fabc27c43f11f7a0d74abc0110e3f40f 249 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 249 38.937 T 12-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 PA257_0390 f0e01755ab60cba89f8a87dace399a5c 464 Gene3D G3DSA:1.20.1740.10 27 459 1.5E-68 T 12-10-2018 PA257_0390 f0e01755ab60cba89f8a87dace399a5c 464 Pfam PF00324 Amino acid permease 37 431 2.7E-35 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_0390 f0e01755ab60cba89f8a87dace399a5c 464 PIRSF PIRSF006060 17 453 6.9E-64 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_1071 49c42ed5574ab0ebf0f2e360c5ff53f0 68 SUPERFAMILY SSF47413 3 64 2.12E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_1071 49c42ed5574ab0ebf0f2e360c5ff53f0 68 Pfam PF01381 Helix-turn-helix 5 57 2.0E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_1071 49c42ed5574ab0ebf0f2e360c5ff53f0 68 Gene3D G3DSA:1.10.260.40 1 63 1.7E-26 T 12-10-2018 PA257_1071 49c42ed5574ab0ebf0f2e360c5ff53f0 68 SMART SM00530 4 59 2.8E-18 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_6442 86bd5720816bfa366b2c82cf751d10ba 750 Pfam PF05170 AsmA family 1 635 4.5E-190 T 12-10-2018 IPR007844 AsmA PA257_3316 133500db1caa2c4c0ca03ee29d06b9c3 411 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 254 386 4.1E-22 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PA257_3316 133500db1caa2c4c0ca03ee29d06b9c3 411 Gene3D G3DSA:2.40.110.10 136 234 4.3E-30 T 12-10-2018 PA257_3316 133500db1caa2c4c0ca03ee29d06b9c3 411 Gene3D G3DSA:1.10.540.10 28 133 3.8E-22 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_3316 133500db1caa2c4c0ca03ee29d06b9c3 411 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 45 126 1.5E-9 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_3316 133500db1caa2c4c0ca03ee29d06b9c3 411 Gene3D G3DSA:1.20.140.10 235 409 5.5E-53 T 12-10-2018 PA257_3316 133500db1caa2c4c0ca03ee29d06b9c3 411 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 21 411 1.7E-198 T 12-10-2018 IPR023922 Sulphate-starvation-induced SfnB PA257_3316 133500db1caa2c4c0ca03ee29d06b9c3 411 PIRSF PIRSF016578 15 406 1.2E-36 T 12-10-2018 PA257_3316 133500db1caa2c4c0ca03ee29d06b9c3 411 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 145 227 1.9E-9 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_3316 133500db1caa2c4c0ca03ee29d06b9c3 411 SUPERFAMILY SSF47203 237 410 9.99E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_3316 133500db1caa2c4c0ca03ee29d06b9c3 411 SUPERFAMILY SSF56645 34 235 6.94E-48 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_2157 a5d7258747e46deef42901de44c8aacd 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2157 a5d7258747e46deef42901de44c8aacd 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2157 a5d7258747e46deef42901de44c8aacd 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2157 a5d7258747e46deef42901de44c8aacd 306 SUPERFAMILY SSF46785 1 87 1.33E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2157 a5d7258747e46deef42901de44c8aacd 306 Pfam PF03466 LysR substrate binding domain 87 286 5.1E-47 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2157 a5d7258747e46deef42901de44c8aacd 306 Gene3D G3DSA:1.10.10.10 1 88 3.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2157 a5d7258747e46deef42901de44c8aacd 306 Gene3D G3DSA:3.40.190.10 162 257 1.2E-62 T 12-10-2018 PA257_2157 a5d7258747e46deef42901de44c8aacd 306 SUPERFAMILY SSF53850 89 287 1.26E-47 T 12-10-2018 PA257_2157 a5d7258747e46deef42901de44c8aacd 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 8.0E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2157 a5d7258747e46deef42901de44c8aacd 306 Gene3D G3DSA:3.40.190.10 90 283 1.2E-62 T 12-10-2018 PA257_1147 45656b0c106af03d1184d00d036aa04f 214 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 210 9.3E-51 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PA257_1147 45656b0c106af03d1184d00d036aa04f 214 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 211 31.135 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PA257_1147 45656b0c106af03d1184d00d036aa04f 214 SUPERFAMILY SSF52374 1 211 4.38E-53 T 12-10-2018 PA257_1147 45656b0c106af03d1184d00d036aa04f 214 Gene3D G3DSA:3.40.50.620 2 214 1.4E-71 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1147 45656b0c106af03d1184d00d036aa04f 214 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 68 1.5E-9 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PA257_1147 45656b0c106af03d1184d00d036aa04f 214 Pfam PF01467 Cytidylyltransferase-like 7 184 6.3E-31 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PA257_6953 88ce3cf90b4c0b295befcb0e1684f462 401 Pfam PF07690 Major Facilitator Superfamily 21 303 2.7E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6953 88ce3cf90b4c0b295befcb0e1684f462 401 SUPERFAMILY SSF103473 6 387 2.22E-54 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6953 88ce3cf90b4c0b295befcb0e1684f462 401 Gene3D G3DSA:1.20.1250.20 15 385 2.0E-47 T 12-10-2018 PA257_6953 88ce3cf90b4c0b295befcb0e1684f462 401 PRINTS PR01035 Tetracycline resistance protein signature 52 71 4.9E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_6953 88ce3cf90b4c0b295befcb0e1684f462 401 PRINTS PR01035 Tetracycline resistance protein signature 83 107 4.9E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_6953 88ce3cf90b4c0b295befcb0e1684f462 401 PRINTS PR01035 Tetracycline resistance protein signature 248 268 4.9E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_6953 88ce3cf90b4c0b295befcb0e1684f462 401 PRINTS PR01035 Tetracycline resistance protein signature 141 163 4.9E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PA257_4383 997cb9f3ffaf72ee2d1c5fd9a52e6adf 303 SUPERFAMILY SSF103481 46 144 9.81E-12 T 12-10-2018 PA257_4383 997cb9f3ffaf72ee2d1c5fd9a52e6adf 303 SUPERFAMILY SSF103481 193 295 3.53E-15 T 12-10-2018 PA257_4383 997cb9f3ffaf72ee2d1c5fd9a52e6adf 303 Pfam PF00892 EamA-like transporter family 156 292 4.0E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_4383 997cb9f3ffaf72ee2d1c5fd9a52e6adf 303 Pfam PF00892 EamA-like transporter family 12 140 2.1E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_0136 e61a8966da5d119ca4e1d14a65f0e998 304 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 14 296 7.2E-106 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 PA257_0136 e61a8966da5d119ca4e1d14a65f0e998 304 Gene3D G3DSA:1.10.357.140 19 181 7.3E-21 T 12-10-2018 PA257_0136 e61a8966da5d119ca4e1d14a65f0e998 304 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site PA257_0136 e61a8966da5d119ca4e1d14a65f0e998 304 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 12 297 19.81 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 PA257_0136 e61a8966da5d119ca4e1d14a65f0e998 304 Pfam PF01040 UbiA prenyltransferase family 29 285 5.2E-60 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 PA257_3364 e5e9385444154390939005b305a3dbfd 230 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 20 216 3.4E-120 T 12-10-2018 IPR014063 Arsenate resistance ArsH PA257_3364 e5e9385444154390939005b305a3dbfd 230 Pfam PF03358 NADPH-dependent FMN reductase 24 166 8.0E-27 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PA257_3364 e5e9385444154390939005b305a3dbfd 230 Gene3D G3DSA:3.40.50.360 2 230 3.6E-76 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_3364 e5e9385444154390939005b305a3dbfd 230 SUPERFAMILY SSF52218 21 217 6.05E-62 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_5647 712812f80878e79025c9957087503358 524 Pfam PF07655 Secretin N-terminal domain 168 255 1.0E-12 T 12-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 PA257_5647 712812f80878e79025c9957087503358 524 Pfam PF00263 Bacterial type II and III secretion system protein 356 522 7.4E-14 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 PA257_5647 712812f80878e79025c9957087503358 524 TIGRFAM TIGR02520 pilus_B_mal_scr: type IVB pilus formation outer membrane protein, R64 PilN family 12 522 9.0E-161 T 12-10-2018 IPR013359 Pilus formation type IVB, outer membrane PilN PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 SUPERFAMILY SSF51735 4 153 9.97E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 SUPERFAMILY SSF55347 129 272 1.9E-61 T 12-10-2018 PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 135 8.8E-43 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 SUPERFAMILY SSF69055 300 393 5.1E-31 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 Gene3D G3DSA:1.10.1740.10 311 395 2.3E-30 T 12-10-2018 PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 269 385 1.2E-43 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 PIRSF PIRSF006205 4 396 6.2E-149 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 389 1.6E-157 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 Gene3D G3DSA:3.40.50.720 1 153 5.0E-49 T 12-10-2018 PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 149 237 8.3E-38 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PA257_1571 c7776a844510c4ea1a912fac056e1ce2 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 390 47.064 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PA257_1122 919b30beab285a9ba2a2c8ed7d143a13 180 Pfam PF09335 SNARE associated Golgi protein 6 131 1.3E-25 T 12-10-2018 IPR032816 SNARE associated Golgi protein PA257_0385 01d854cffc816aec0f265239da119277 464 Gene3D G3DSA:1.10.45.10 422 462 9.1E-17 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PA257_0385 01d854cffc816aec0f265239da119277 464 Gene3D G3DSA:3.30.70.2190 217 333 2.2E-23 T 12-10-2018 PA257_0385 01d854cffc816aec0f265239da119277 464 Gene3D G3DSA:3.30.465.10 95 215 3.8E-39 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_0385 01d854cffc816aec0f265239da119277 464 Gene3D G3DSA:3.30.70.2740 336 421 3.9E-28 T 12-10-2018 PA257_0385 01d854cffc816aec0f265239da119277 464 Pfam PF01565 FAD binding domain 41 179 2.2E-37 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PA257_0385 01d854cffc816aec0f265239da119277 464 SUPERFAMILY SSF56176 4 217 1.26E-65 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_0385 01d854cffc816aec0f265239da119277 464 Gene3D G3DSA:3.30.43.10 1 92 7.0E-25 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PA257_0385 01d854cffc816aec0f265239da119277 464 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 461 1.0E-65 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PA257_0385 01d854cffc816aec0f265239da119277 464 SUPERFAMILY SSF55103 222 463 8.83E-61 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 1.8E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 134 153 1.8E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 1.8E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 1.8E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 189 209 1.8E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 Gene3D G3DSA:3.30.420.40 156 319 7.4E-131 T 12-10-2018 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 Gene3D G3DSA:3.30.420.40 14 329 7.4E-131 T 12-10-2018 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 SUPERFAMILY SSF53067 9 150 3.02E-38 T 12-10-2018 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 Gene3D G3DSA:3.90.640.10 188 261 7.4E-131 T 12-10-2018 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 SUPERFAMILY SSF53067 151 340 8.76E-48 T 12-10-2018 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 338 9.2E-161 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PA257_5549 70fa0299c36d1ccf7815142bcbe5bdab 345 Pfam PF06723 MreB/Mbl protein 11 337 3.6E-148 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PA257_6746 4f2c4fd5c3816c8b956e4ff56fa01e10 296 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 11 294 30.693 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 PA257_6746 4f2c4fd5c3816c8b956e4ff56fa01e10 296 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 18 293 3.5E-106 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 PA257_6746 4f2c4fd5c3816c8b956e4ff56fa01e10 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site PA257_6746 4f2c4fd5c3816c8b956e4ff56fa01e10 296 Gene3D G3DSA:1.10.357.140 30 188 2.4E-41 T 12-10-2018 PA257_6746 4f2c4fd5c3816c8b956e4ff56fa01e10 296 Pfam PF01040 UbiA prenyltransferase family 34 278 1.2E-65 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 PA257_5784 9f24c46a0f44d243223721a91179c484 334 Gene3D G3DSA:3.40.50.300 10 211 7.0E-67 T 12-10-2018 PA257_5784 9f24c46a0f44d243223721a91179c484 334 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 237 330 1.3E-20 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PA257_5784 9f24c46a0f44d243223721a91179c484 334 SUPERFAMILY SSF90002 237 329 1.57E-25 T 12-10-2018 PA257_5784 9f24c46a0f44d243223721a91179c484 334 SMART SM00833 237 331 7.4E-16 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PA257_5784 9f24c46a0f44d243223721a91179c484 334 Gene3D G3DSA:3.30.1220.10 222 331 8.9E-34 T 12-10-2018 IPR036627 CobW-like, C-terminal domain superfamily PA257_5784 9f24c46a0f44d243223721a91179c484 334 SUPERFAMILY SSF52540 11 210 1.99E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5784 9f24c46a0f44d243223721a91179c484 334 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 191 4.4E-52 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PA257_1242 10ae52fb1e1d1ed37f0e25604a5b034d 258 Pfam PF05235 CHAD domain 23 212 1.0E-27 T 12-10-2018 IPR007899 CHAD domain PA257_1242 10ae52fb1e1d1ed37f0e25604a5b034d 258 SMART SM00880 10 251 4.6E-42 T 12-10-2018 IPR007899 CHAD domain PA257_1242 10ae52fb1e1d1ed37f0e25604a5b034d 258 Gene3D G3DSA:1.40.20.10 2 254 1.1E-29 T 12-10-2018 IPR038186 CHAD domain superfamily PA257_6791 6ab01b69bbe57852e6852e9f863dd24b 325 Gene3D G3DSA:3.20.20.140 1 325 2.0E-127 T 12-10-2018 PA257_6791 6ab01b69bbe57852e6852e9f863dd24b 325 SUPERFAMILY SSF51556 9 324 1.36E-82 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_6791 6ab01b69bbe57852e6852e9f863dd24b 325 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 6 320 3.0E-93 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 PA257_0729 2e1fcd53e49088747aaa1ccf741ea3ab 189 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 189 18.694 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PA257_0729 2e1fcd53e49088747aaa1ccf741ea3ab 189 Pfam PF02660 Glycerol-3-phosphate acyltransferase 8 181 3.8E-53 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PA257_0729 2e1fcd53e49088747aaa1ccf741ea3ab 189 SMART SM01207 7 182 2.0E-81 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PA257_0729 2e1fcd53e49088747aaa1ccf741ea3ab 189 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 187 4.5E-54 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PA257_1389 e001b1de3781811b00052f02162bf17f 253 SUPERFAMILY SSF55166 24 227 1.65E-51 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PA257_1389 e001b1de3781811b00052f02162bf17f 253 Gene3D G3DSA:3.30.1380.10 46 224 9.5E-47 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PA257_1389 e001b1de3781811b00052f02162bf17f 253 Pfam PF01427 D-ala-D-ala dipeptidase 72 223 2.5E-20 T 12-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PA257_1389 e001b1de3781811b00052f02162bf17f 253 PIRSF PIRSF026671 4 233 2.2E-44 T 12-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PA257_1389 e001b1de3781811b00052f02162bf17f 253 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 23 227 24.332 T 12-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PA257_5303 9fea11742cbb7f952a9195d698843e0e 314 SUPERFAMILY SSF54534 157 260 1.24E-24 T 12-10-2018 PA257_5303 9fea11742cbb7f952a9195d698843e0e 314 Gene3D G3DSA:3.10.50.40 138 283 1.5E-25 T 12-10-2018 PA257_5303 9fea11742cbb7f952a9195d698843e0e 314 Pfam PF13145 PPIC-type PPIASE domain 139 270 4.3E-22 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 PA257_5303 9fea11742cbb7f952a9195d698843e0e 314 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 195 216 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 PA257_3018 488bf81bed2c3378330cfc07d7968401 409 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 233 6.0E-20 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_3018 488bf81bed2c3378330cfc07d7968401 409 Gene3D G3DSA:1.20.140.10 246 401 2.7E-36 T 12-10-2018 PA257_3018 488bf81bed2c3378330cfc07d7968401 409 Gene3D G3DSA:1.10.540.10 1 130 9.2E-57 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_3018 488bf81bed2c3378330cfc07d7968401 409 SUPERFAMILY SSF47203 243 401 3.87E-44 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_3018 488bf81bed2c3378330cfc07d7968401 409 Gene3D G3DSA:2.40.110.10 131 245 2.6E-50 T 12-10-2018 PA257_3018 488bf81bed2c3378330cfc07d7968401 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 128 6.7E-18 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_3018 488bf81bed2c3378330cfc07d7968401 409 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 245 393 1.9E-32 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_3018 488bf81bed2c3378330cfc07d7968401 409 SUPERFAMILY SSF56645 1 258 1.44E-72 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_6337 030c9532250e8bae1a2610cbbf37b4d8 422 Gene3D G3DSA:3.40.50.720 160 419 5.3E-83 T 12-10-2018 PA257_6337 030c9532250e8bae1a2610cbbf37b4d8 422 PIRSF PIRSF000106 45 419 5.1E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PA257_6337 030c9532250e8bae1a2610cbbf37b4d8 422 SUPERFAMILY SSF53223 9 160 5.47E-51 T 12-10-2018 PA257_6337 030c9532250e8bae1a2610cbbf37b4d8 422 SMART SM00919 162 398 3.8E-144 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PA257_6337 030c9532250e8bae1a2610cbbf37b4d8 422 Pfam PF03949 Malic enzyme, NAD binding domain 164 354 3.5E-26 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PA257_6337 030c9532250e8bae1a2610cbbf37b4d8 422 SUPERFAMILY SSF51735 162 412 1.18E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6337 030c9532250e8bae1a2610cbbf37b4d8 422 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PA257_6337 030c9532250e8bae1a2610cbbf37b4d8 422 SMART SM01274 17 150 2.0E-76 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PA257_6337 030c9532250e8bae1a2610cbbf37b4d8 422 Pfam PF00390 Malic enzyme, N-terminal domain 19 148 1.8E-25 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PA257_6337 030c9532250e8bae1a2610cbbf37b4d8 422 Gene3D G3DSA:3.40.50.10380 1 159 2.2E-66 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 PA257_2097 545fc42df5c159a7e61ee90a3a9b6bf2 209 Pfam PF01300 Telomere recombination 22 198 1.9E-44 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 PA257_2097 545fc42df5c159a7e61ee90a3a9b6bf2 209 Gene3D G3DSA:3.90.870.10 1 206 1.3E-63 T 12-10-2018 PA257_2097 545fc42df5c159a7e61ee90a3a9b6bf2 209 SUPERFAMILY SSF55821 1 204 3.05E-63 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PA257_2097 545fc42df5c159a7e61ee90a3a9b6bf2 209 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.8E-62 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 PA257_0651 cf84f8c9adb426f8146e8a60fde62e4a 280 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 99 132 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_0651 cf84f8c9adb426f8146e8a60fde62e4a 280 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 19 254 4.6E-94 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_0651 cf84f8c9adb426f8146e8a60fde62e4a 280 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 24 38 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_0651 cf84f8c9adb426f8146e8a60fde62e4a 280 Gene3D G3DSA:3.30.950.10 135 267 1.0E-53 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PA257_0651 cf84f8c9adb426f8146e8a60fde62e4a 280 Gene3D G3DSA:3.40.1010.10 18 134 3.6E-44 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PA257_0651 cf84f8c9adb426f8146e8a60fde62e4a 280 SUPERFAMILY SSF53790 15 264 1.31E-82 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PA257_0651 cf84f8c9adb426f8146e8a60fde62e4a 280 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 21 231 2.4E-50 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 780 797 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 Gene3D G3DSA:3.40.50.12440 44 1248 0.0 T 12-10-2018 PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 SUPERFAMILY SSF50692 1085 1241 4.07E-48 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 Pfam PF01568 Molydopterin dinucleotide binding domain 1094 1208 1.3E-22 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 Pfam PF00384 Molybdopterin oxidoreductase 108 836 1.1E-163 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1241 0.0 T 12-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 SMART SM00926 43 105 5.5E-8 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.6E-17 T 12-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1131 1158 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PA257_1291 317212e50e775062aff4852dd0d3a25d 1261 SUPERFAMILY SSF53706 4 1076 0.0 T 12-10-2018 PA257_1232 c09b0aa4d66d3b93fc38bde2e441b788 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 2.3E-128 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_1232 c09b0aa4d66d3b93fc38bde2e441b788 391 Gene3D G3DSA:3.40.47.10 5 274 9.3E-142 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1232 c09b0aa4d66d3b93fc38bde2e441b788 391 Gene3D G3DSA:3.40.47.10 126 387 9.3E-142 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1232 c09b0aa4d66d3b93fc38bde2e441b788 391 SUPERFAMILY SSF53901 3 268 7.52E-81 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1232 c09b0aa4d66d3b93fc38bde2e441b788 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 PA257_1232 c09b0aa4d66d3b93fc38bde2e441b788 391 Pfam PF02803 Thiolase, C-terminal domain 268 389 6.2E-40 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_1232 c09b0aa4d66d3b93fc38bde2e441b788 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 2.6E-88 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_1232 c09b0aa4d66d3b93fc38bde2e441b788 391 SUPERFAMILY SSF53901 269 390 2.05E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1232 c09b0aa4d66d3b93fc38bde2e441b788 391 PIRSF PIRSF000429 1 391 1.2E-113 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_1232 c09b0aa4d66d3b93fc38bde2e441b788 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PA257_3267 8c6ba7e3445738e3913d69de35f76eeb 178 SUPERFAMILY SSF82185 12 134 1.96E-25 T 12-10-2018 PA257_3267 8c6ba7e3445738e3913d69de35f76eeb 178 Gene3D G3DSA:2.20.110.10 41 150 7.6E-18 T 12-10-2018 PA257_3267 8c6ba7e3445738e3913d69de35f76eeb 178 Pfam PF07661 MORN repeat variant 120 141 0.48 T 12-10-2018 IPR011652 MORN variant PA257_3267 8c6ba7e3445738e3913d69de35f76eeb 178 Pfam PF07661 MORN repeat variant 96 117 0.0065 T 12-10-2018 IPR011652 MORN variant PA257_3267 8c6ba7e3445738e3913d69de35f76eeb 178 Pfam PF07661 MORN repeat variant 48 65 0.22 T 12-10-2018 IPR011652 MORN variant PA257_2358 9d021530fea30dd4b081924c10d3cee8 250 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PA257_2358 9d021530fea30dd4b081924c10d3cee8 250 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 206 5.6E-48 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PA257_2358 9d021530fea30dd4b081924c10d3cee8 250 SUPERFAMILY SSF53790 2 229 1.27E-68 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PA257_2358 9d021530fea30dd4b081924c10d3cee8 250 Gene3D G3DSA:3.40.1010.10 1 109 1.5E-30 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PA257_2358 9d021530fea30dd4b081924c10d3cee8 250 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 247 4.5E-98 T 12-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 PA257_2358 9d021530fea30dd4b081924c10d3cee8 250 Gene3D G3DSA:3.30.950.10 110 229 1.8E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PA257_0313 1816143e1be7d4f9c38be48701097913 91 SUPERFAMILY SSF55008 17 88 2.23E-22 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_0313 1816143e1be7d4f9c38be48701097913 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 1.4E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_0313 1816143e1be7d4f9c38be48701097913 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 1.4E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_0313 1816143e1be7d4f9c38be48701097913 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 1.4E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_0313 1816143e1be7d4f9c38be48701097913 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 1.4E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_0313 1816143e1be7d4f9c38be48701097913 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 1.4E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_0313 1816143e1be7d4f9c38be48701097913 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 1.4E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_0313 1816143e1be7d4f9c38be48701097913 91 Pfam PF00403 Heavy-metal-associated domain 25 85 6.0E-17 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_0313 1816143e1be7d4f9c38be48701097913 91 Gene3D G3DSA:3.30.70.100 20 91 4.3E-24 T 12-10-2018 PA257_0313 1816143e1be7d4f9c38be48701097913 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 91 3.8E-44 T 12-10-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 PA257_0313 1816143e1be7d4f9c38be48701097913 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PA257_1901 14f1848ff49faf65ce56fb2c5211ae70 256 Gene3D G3DSA:3.60.15.10 1 256 7.8E-63 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_1901 14f1848ff49faf65ce56fb2c5211ae70 256 SUPERFAMILY SSF56281 1 256 1.14E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_1901 14f1848ff49faf65ce56fb2c5211ae70 256 SMART SM00849 36 225 0.0094 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_1901 14f1848ff49faf65ce56fb2c5211ae70 256 Pfam PF12706 Beta-lactamase superfamily domain 64 225 8.2E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_1901 14f1848ff49faf65ce56fb2c5211ae70 256 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 253 7.4E-114 T 12-10-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_2016 c378169b5dcab6d5a4bf3466db8c37de 284 Gene3D G3DSA:1.10.10.60 233 282 2.9E-12 T 12-10-2018 PA257_2016 c378169b5dcab6d5a4bf3466db8c37de 284 SUPERFAMILY SSF46689 176 225 8.51E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2016 c378169b5dcab6d5a4bf3466db8c37de 284 SMART SM00342 190 272 1.6E-32 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2016 c378169b5dcab6d5a4bf3466db8c37de 284 SUPERFAMILY SSF46689 226 274 3.54E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2016 c378169b5dcab6d5a4bf3466db8c37de 284 Pfam PF12833 Helix-turn-helix domain 196 273 3.1E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2016 c378169b5dcab6d5a4bf3466db8c37de 284 Pfam PF02311 AraC-like ligand binding domain 19 151 1.1E-27 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_2016 c378169b5dcab6d5a4bf3466db8c37de 284 Gene3D G3DSA:1.10.10.60 171 232 1.1E-20 T 12-10-2018 PA257_2016 c378169b5dcab6d5a4bf3466db8c37de 284 SUPERFAMILY SSF51215 31 157 1.31E-16 T 12-10-2018 IPR037923 Transcription regulator HTH-like PA257_3289 00ff8b5dadefbd26ab0234be8a797eaf 394 SUPERFAMILY SSF56645 5 215 4.97E-42 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_3289 00ff8b5dadefbd26ab0234be8a797eaf 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 112 7.4E-12 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_3289 00ff8b5dadefbd26ab0234be8a797eaf 394 PIRSF PIRSF016578 1 392 1.1E-30 T 12-10-2018 PA257_3289 00ff8b5dadefbd26ab0234be8a797eaf 394 SUPERFAMILY SSF47203 234 390 9.02E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_3289 00ff8b5dadefbd26ab0234be8a797eaf 394 Gene3D G3DSA:1.10.540.10 11 118 3.8E-28 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_3289 00ff8b5dadefbd26ab0234be8a797eaf 394 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 234 369 1.5E-16 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PA257_3289 00ff8b5dadefbd26ab0234be8a797eaf 394 Gene3D G3DSA:2.40.110.10 120 216 2.6E-22 T 12-10-2018 PA257_3289 00ff8b5dadefbd26ab0234be8a797eaf 394 Gene3D G3DSA:1.20.140.10 222 394 5.5E-57 T 12-10-2018 PA257_1172 c5b818880f98b35f956258f84429ea24 446 SMART SM00729 147 367 3.4E-58 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_1172 c5b818880f98b35f956258f84429ea24 446 Gene3D G3DSA:3.40.50.12160 3 138 3.0E-32 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily PA257_1172 c5b818880f98b35f956258f84429ea24 446 Gene3D G3DSA:3.80.30.20 145 378 3.8E-83 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PA257_1172 c5b818880f98b35f956258f84429ea24 446 Pfam PF04055 Radical SAM superfamily 151 325 1.4E-28 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_1172 c5b818880f98b35f956258f84429ea24 446 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 PA257_1172 c5b818880f98b35f956258f84429ea24 446 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 438 7.4E-150 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 PA257_1172 c5b818880f98b35f956258f84429ea24 446 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 441 1.5E-185 T 12-10-2018 PA257_1172 c5b818880f98b35f956258f84429ea24 446 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 8.7E-28 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 PA257_1172 c5b818880f98b35f956258f84429ea24 446 SUPERFAMILY SSF102114 125 375 2.62E-61 T 12-10-2018 PA257_1172 c5b818880f98b35f956258f84429ea24 446 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 442 73.698 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 PA257_1172 c5b818880f98b35f956258f84429ea24 446 Pfam PF01938 TRAM domain 378 441 1.0E-19 T 12-10-2018 IPR002792 TRAM domain PA257_6207 7257196783dd5e665193b80620b4b641 747 SUPERFAMILY SSF102114 370 620 4.45E-14 T 12-10-2018 PA257_6207 7257196783dd5e665193b80620b4b641 747 Pfam PF08497 Radical SAM N-terminal 23 378 2.0E-146 T 12-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal PA257_6207 7257196783dd5e665193b80620b4b641 747 Gene3D G3DSA:3.80.30.20 374 635 1.1E-15 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PA257_6207 7257196783dd5e665193b80620b4b641 747 Pfam PF04055 Radical SAM superfamily 379 584 4.5E-22 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_6207 7257196783dd5e665193b80620b4b641 747 SMART SM00729 375 628 1.4E-7 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_6207 7257196783dd5e665193b80620b4b641 747 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 23 643 1.6E-264 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 PA257_6207 7257196783dd5e665193b80620b4b641 747 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 379 399 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 PA257_6207 7257196783dd5e665193b80620b4b641 747 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 23 645 49.924 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 PA257_6207 7257196783dd5e665193b80620b4b641 747 Pfam PF11842 Domain of unknown function (DUF3362) 593 728 8.8E-53 T 12-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal PA257_5826 63400d161e2da7dde99ab8eda593e87e 497 SUPERFAMILY SSF51905 4 265 8.55E-25 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5826 63400d161e2da7dde99ab8eda593e87e 497 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 1 484 52.63 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 PA257_5826 63400d161e2da7dde99ab8eda593e87e 497 Gene3D G3DSA:3.50.50.60 4 254 1.1E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5826 63400d161e2da7dde99ab8eda593e87e 497 Gene3D G3DSA:3.30.9.10 104 299 1.1E-11 T 12-10-2018 PA257_5826 63400d161e2da7dde99ab8eda593e87e 497 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 1 482 3.9E-265 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 PA257_5826 63400d161e2da7dde99ab8eda593e87e 497 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 2 484 5.3E-231 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 PA257_2485 711ac182fafbdb40c2436b293b656030 218 SUPERFAMILY SSF53335 1 216 3.38E-58 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2485 711ac182fafbdb40c2436b293b656030 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 216 1.8E-85 T 12-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 PA257_2485 711ac182fafbdb40c2436b293b656030 218 Gene3D G3DSA:3.40.50.150 16 218 2.2E-64 T 12-10-2018 PA257_2485 711ac182fafbdb40c2436b293b656030 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 217 9.6E-87 T 12-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 PA257_2485 711ac182fafbdb40c2436b293b656030 218 PIRSF PIRSF023956 1 218 1.1E-76 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 PA257_2485 711ac182fafbdb40c2436b293b656030 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 39.829 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 PA257_3554 f15756f63eeebc95f7f59d4152c2c35b 358 SUPERFAMILY SSF101821 78 191 2.29E-11 T 12-10-2018 PA257_3554 f15756f63eeebc95f7f59d4152c2c35b 358 Pfam PF05343 M42 glutamyl aminopeptidase 62 343 7.9E-39 T 12-10-2018 IPR008007 Peptidase M42 PA257_3554 f15756f63eeebc95f7f59d4152c2c35b 358 PIRSF PIRSF001123 2 357 4.5E-36 T 12-10-2018 IPR008007 Peptidase M42 PA257_3554 f15756f63eeebc95f7f59d4152c2c35b 358 Gene3D G3DSA:2.40.30.40 81 171 3.6E-50 T 12-10-2018 IPR023367 Peptidase M42, domain 2 PA257_3554 f15756f63eeebc95f7f59d4152c2c35b 358 SUPERFAMILY SSF53187 7 352 4.0E-39 T 12-10-2018 PA257_3554 f15756f63eeebc95f7f59d4152c2c35b 358 Gene3D G3DSA:3.40.630.10 11 348 3.6E-50 T 12-10-2018 PA257_5407 261e9600e2a9d7ede3ec74dbbc863c6e 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_5407 261e9600e2a9d7ede3ec74dbbc863c6e 439 SUPERFAMILY SSF103473 11 419 1.96E-65 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_5407 261e9600e2a9d7ede3ec74dbbc863c6e 439 Pfam PF00083 Sugar (and other) transporter 16 213 2.3E-20 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PA257_5407 261e9600e2a9d7ede3ec74dbbc863c6e 439 Gene3D G3DSA:1.20.1250.20 10 422 7.1E-62 T 12-10-2018 PA257_5407 261e9600e2a9d7ede3ec74dbbc863c6e 439 Pfam PF07690 Major Facilitator Superfamily 247 430 4.3E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_5407 261e9600e2a9d7ede3ec74dbbc863c6e 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 292 309 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_4127 5543d5e228d7c4ca33bb947908cf6f50 158 SMART SM00347 31 131 9.0E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4127 5543d5e228d7c4ca33bb947908cf6f50 158 SUPERFAMILY SSF46785 6 143 1.08E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4127 5543d5e228d7c4ca33bb947908cf6f50 158 Pfam PF12802 MarR family 37 94 8.7E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4127 5543d5e228d7c4ca33bb947908cf6f50 158 Gene3D G3DSA:1.10.10.10 1 142 2.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4104 8dd3b4fd0383f4e5385d9420ba317f7f 329 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 57 86 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 PA257_4104 8dd3b4fd0383f4e5385d9420ba317f7f 329 Gene3D G3DSA:3.30.200.20 21 141 3.4E-21 T 12-10-2018 PA257_4104 8dd3b4fd0383f4e5385d9420ba317f7f 329 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 179 191 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PA257_4104 8dd3b4fd0383f4e5385d9420ba317f7f 329 PIRSF PIRSF000654 80 297 1.1E-17 T 12-10-2018 PA257_4104 8dd3b4fd0383f4e5385d9420ba317f7f 329 Pfam PF00069 Protein kinase domain 51 280 1.0E-38 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PA257_4104 8dd3b4fd0383f4e5385d9420ba317f7f 329 SUPERFAMILY SSF56112 39 307 1.97E-60 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_4104 8dd3b4fd0383f4e5385d9420ba317f7f 329 SMART SM00220 51 323 8.0E-44 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PA257_4104 8dd3b4fd0383f4e5385d9420ba317f7f 329 Gene3D G3DSA:1.10.510.10 142 322 1.6E-36 T 12-10-2018 PA257_6537 bc9116e57191bbf39dd4eb3ce3f1054d 147 Gene3D G3DSA:3.10.129.10 1 147 6.0E-52 T 12-10-2018 PA257_6537 bc9116e57191bbf39dd4eb3ce3f1054d 147 SUPERFAMILY SSF54637 9 142 3.62E-38 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6537 bc9116e57191bbf39dd4eb3ce3f1054d 147 Pfam PF03061 Thioesterase superfamily 28 111 8.3E-15 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_1882 8fa11f9bf364ebe35d79387ff2c2150b 715 Pfam PF04205 FMN-binding domain 85 172 1.5E-6 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 PA257_1882 8fa11f9bf364ebe35d79387ff2c2150b 715 SMART SM00900 82 175 1.5E-13 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 PA257_1882 8fa11f9bf364ebe35d79387ff2c2150b 715 PIRSF PIRSF036354 1 715 0.0 T 12-10-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 PA257_1882 8fa11f9bf364ebe35d79387ff2c2150b 715 SUPERFAMILY SSF54862 512 677 3.55E-6 T 12-10-2018 PA257_1882 8fa11f9bf364ebe35d79387ff2c2150b 715 Pfam PF12801 4Fe-4S binding domain 496 542 6.3E-15 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_1882 8fa11f9bf364ebe35d79387ff2c2150b 715 Pfam PF12801 4Fe-4S binding domain 597 643 9.5E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_2347 387a3edbef936f43063ae6253b4ada3d 258 Gene3D G3DSA:3.20.20.140 1 258 3.2E-89 T 12-10-2018 PA257_2347 387a3edbef936f43063ae6253b4ada3d 258 Pfam PF01026 TatD related DNase 3 254 1.7E-77 T 12-10-2018 IPR001130 TatD family GO:0016788 PA257_2347 387a3edbef936f43063ae6253b4ada3d 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PA257_2347 387a3edbef936f43063ae6253b4ada3d 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 8.5E-84 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 PA257_2347 387a3edbef936f43063ae6253b4ada3d 258 PIRSF PIRSF005902 1 258 6.9E-76 T 12-10-2018 IPR001130 TatD family GO:0016788 PA257_2347 387a3edbef936f43063ae6253b4ada3d 258 SUPERFAMILY SSF51556 2 256 1.43E-85 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_2347 387a3edbef936f43063ae6253b4ada3d 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PA257_0774 a5031c64a439e5dd2fcc17c1023505a4 167 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 1 167 1.4E-78 T 12-10-2018 IPR006498 Tail tube protein PA257_0774 a5031c64a439e5dd2fcc17c1023505a4 167 Pfam PF04985 Phage tail tube protein FII 3 166 6.1E-59 T 12-10-2018 IPR006498 Tail tube protein PA257_2433 6d8c085f71a74ac518e00a0d985c5711 291 Gene3D G3DSA:1.10.10.10 1 84 1.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2433 6d8c085f71a74ac518e00a0d985c5711 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 1.8E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2433 6d8c085f71a74ac518e00a0d985c5711 291 SUPERFAMILY SSF53850 83 288 3.1E-47 T 12-10-2018 PA257_2433 6d8c085f71a74ac518e00a0d985c5711 291 Gene3D G3DSA:3.40.190.290 85 286 3.1E-73 T 12-10-2018 PA257_2433 6d8c085f71a74ac518e00a0d985c5711 291 Pfam PF03466 LysR substrate binding domain 82 286 1.1E-43 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2433 6d8c085f71a74ac518e00a0d985c5711 291 SUPERFAMILY SSF46785 1 79 4.25E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3593 a2e1ae1baf6bdc26bc402cba855a1f48 129 Pfam PF00072 Response regulator receiver domain 9 116 3.2E-5 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3593 a2e1ae1baf6bdc26bc402cba855a1f48 129 SUPERFAMILY SSF52172 7 121 1.32E-12 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3593 a2e1ae1baf6bdc26bc402cba855a1f48 129 Gene3D G3DSA:3.40.50.2300 4 123 1.1E-9 T 12-10-2018 PA257_2585 16ddae70aadf05529137c31d42767e08 548 SUPERFAMILY SSF55008 2 64 7.85E-16 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_2585 16ddae70aadf05529137c31d42767e08 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 87 405 2.0E-63 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_2585 16ddae70aadf05529137c31d42767e08 548 SUPERFAMILY SSF51905 88 444 6.69E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2585 16ddae70aadf05529137c31d42767e08 548 Pfam PF00403 Heavy-metal-associated domain 4 63 4.0E-13 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_2585 16ddae70aadf05529137c31d42767e08 548 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 120 130 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PA257_2585 16ddae70aadf05529137c31d42767e08 548 Gene3D G3DSA:3.50.50.60 89 406 1.6E-119 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2585 16ddae70aadf05529137c31d42767e08 548 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 424 532 2.0E-29 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PA257_2585 16ddae70aadf05529137c31d42767e08 548 TIGRFAM TIGR02053 MerA: mercury(II) reductase 87 548 4.7E-188 T 12-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 PA257_2585 16ddae70aadf05529137c31d42767e08 548 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PA257_2585 16ddae70aadf05529137c31d42767e08 548 PRINTS PR00945 Mercuric reductase class II signature 132 151 6.9E-93 T 12-10-2018 PA257_2585 16ddae70aadf05529137c31d42767e08 548 PRINTS PR00945 Mercuric reductase class II signature 521 540 6.9E-93 T 12-10-2018 PA257_2585 16ddae70aadf05529137c31d42767e08 548 PRINTS PR00945 Mercuric reductase class II signature 259 276 6.9E-93 T 12-10-2018 PA257_2585 16ddae70aadf05529137c31d42767e08 548 PRINTS PR00945 Mercuric reductase class II signature 97 115 6.9E-93 T 12-10-2018 PA257_2585 16ddae70aadf05529137c31d42767e08 548 PRINTS PR00945 Mercuric reductase class II signature 13 23 6.9E-93 T 12-10-2018 PA257_2585 16ddae70aadf05529137c31d42767e08 548 PRINTS PR00945 Mercuric reductase class II signature 224 241 6.9E-93 T 12-10-2018 PA257_2585 16ddae70aadf05529137c31d42767e08 548 PRINTS PR00945 Mercuric reductase class II signature 279 294 6.9E-93 T 12-10-2018 PA257_2585 16ddae70aadf05529137c31d42767e08 548 PRINTS PR00945 Mercuric reductase class II signature 456 476 6.9E-93 T 12-10-2018 PA257_2585 16ddae70aadf05529137c31d42767e08 548 Gene3D G3DSA:3.30.70.100 1 67 2.8E-17 T 12-10-2018 PA257_2585 16ddae70aadf05529137c31d42767e08 548 Gene3D G3DSA:3.30.390.30 423 548 4.9E-47 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_2585 16ddae70aadf05529137c31d42767e08 548 SUPERFAMILY SSF55424 423 546 3.09E-33 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_2585 16ddae70aadf05529137c31d42767e08 548 PIRSF PIRSF000350 1 548 1.7E-264 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PA257_2585 16ddae70aadf05529137c31d42767e08 548 Gene3D G3DSA:3.50.50.60 232 348 1.6E-119 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 SUPERFAMILY SSF56176 184 361 9.0E-53 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 Gene3D G3DSA:3.10.20.30 1 89 8.0E-28 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 199 362 3.4E-50 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 PIRSF PIRSF036557 1 484 2.7E-227 T 12-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 470 7.9E-211 T 12-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 Gene3D G3DSA:3.30.43.10 200 249 9.5E-17 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 Gene3D G3DSA:3.30.390.50 370 472 4.2E-28 T 12-10-2018 PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 76 6.0E-6 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 Gene3D G3DSA:3.30.465.10 250 363 7.9E-33 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 SUPERFAMILY SSF47741 97 201 1.57E-33 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 SUPERFAMILY SSF55447 368 473 1.07E-32 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 370 470 2.2E-30 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 SMART SM01092 370 471 3.7E-33 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 Gene3D G3DSA:1.10.150.120 90 196 7.8E-33 T 12-10-2018 PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 SUPERFAMILY SSF54292 3 90 1.97E-18 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_4265 086cf5ae83d7acaa5ef55c8e9111c79e 484 Pfam PF01799 [2Fe-2S] binding domain 86 158 8.5E-30 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 Gene3D G3DSA:3.40.1500.10 1 301 8.9E-140 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 SUPERFAMILY SSF102886 4 301 1.1E-139 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 165 189 - T 12-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 30 46 5.1E-88 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 89 113 5.1E-88 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 261 287 5.1E-88 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 47 68 5.1E-88 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 161 190 5.1E-88 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 233 260 5.1E-88 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 124 146 5.1E-88 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 Pfam PF01218 Coproporphyrinogen III oxidase 8 301 1.8E-132 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 PIRSF PIRSF000166 2 302 6.2E-128 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_0033 d226d3587c5bbc473501a64bcbf10269 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 276 56.337 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PA257_1830 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 7 69 2.1E-18 T 12-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 PA257_1830 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 SUPERFAMILY SSF50331 6 69 3.16E-16 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_1830 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 Gene3D G3DSA:2.40.50.100 5 70 2.1E-19 T 12-10-2018 PA257_1830 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 Pfam PF03459 TOBE domain 8 67 3.8E-16 T 12-10-2018 IPR005116 Transport-associated OB, type 1 PA257_1807 a179578addc1280a43e92590a28eb4ab 76 SUPERFAMILY SSF118001 1 74 3.79E-26 T 12-10-2018 IPR036685 YehU-like superfamily PA257_1807 a179578addc1280a43e92590a28eb4ab 76 PIRSF PIRSF006169 1 75 2.4E-29 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 PA257_1807 a179578addc1280a43e92590a28eb4ab 76 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 2.9E-25 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 PA257_1807 a179578addc1280a43e92590a28eb4ab 76 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 63 3.0E-30 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 PA257_1807 a179578addc1280a43e92590a28eb4ab 76 Gene3D G3DSA:1.10.10.610 1 76 1.4E-33 T 12-10-2018 IPR036685 YehU-like superfamily PA257_1807 a179578addc1280a43e92590a28eb4ab 76 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 69 24.212 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 PA257_4231 1bce36d9f697a37d10d72f9dd140f5d0 308 Gene3D G3DSA:1.20.58.1490 1 94 5.3E-39 T 12-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily PA257_4231 1bce36d9f697a37d10d72f9dd140f5d0 308 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 35 304 1.0E-79 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PA257_4231 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 2.2E-23 T 12-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal PA257_4231 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 55 207 3.1E-29 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4231 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 215 304 1.72E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4231 1bce36d9f697a37d10d72f9dd140f5d0 308 Gene3D G3DSA:1.10.760.10 186 278 8.3E-74 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4231 1bce36d9f697a37d10d72f9dd140f5d0 308 Gene3D G3DSA:1.10.760.10 107 301 8.3E-74 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4231 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 131 205 1.2E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4231 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 220 298 1.8E-12 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4231 1bce36d9f697a37d10d72f9dd140f5d0 308 PIRSF PIRSF000006 1 305 6.0E-107 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PA257_4132 3b1fd6e7d22c07d02a700d1183ead1ac 334 Pfam PF00107 Zinc-binding dehydrogenase 159 292 1.1E-20 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_4132 3b1fd6e7d22c07d02a700d1183ead1ac 334 SMART SM00829 20 332 2.6E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_4132 3b1fd6e7d22c07d02a700d1183ead1ac 334 SUPERFAMILY SSF50129 5 144 3.82E-37 T 12-10-2018 IPR011032 GroES-like superfamily PA257_4132 3b1fd6e7d22c07d02a700d1183ead1ac 334 SUPERFAMILY SSF51735 125 299 2.67E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4132 3b1fd6e7d22c07d02a700d1183ead1ac 334 Gene3D G3DSA:3.90.180.10 21 331 7.0E-150 T 12-10-2018 PA257_4132 3b1fd6e7d22c07d02a700d1183ead1ac 334 Gene3D G3DSA:3.40.50.720 127 303 7.0E-150 T 12-10-2018 PA257_4132 3b1fd6e7d22c07d02a700d1183ead1ac 334 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 4.5E-38 T 12-10-2018 PA257_3937 7380332c16d8d6fb5bf29ec0e58a40c2 270 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 111 131 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PA257_3937 7380332c16d8d6fb5bf29ec0e58a40c2 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 270 4.0E-46 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_3937 7380332c16d8d6fb5bf29ec0e58a40c2 270 Gene3D G3DSA:3.90.226.10 1 212 7.2E-68 T 12-10-2018 PA257_3937 7380332c16d8d6fb5bf29ec0e58a40c2 270 SUPERFAMILY SSF52096 3 269 5.15E-79 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_3937 7380332c16d8d6fb5bf29ec0e58a40c2 270 Gene3D G3DSA:1.10.12.10 213 270 1.0E-25 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PA257_1364 5b9d0820aecae916a396ab2b6d18deee 346 Pfam PF13413 Helix-turn-helix domain 21 81 1.5E-21 T 12-10-2018 PA257_1364 5b9d0820aecae916a396ab2b6d18deee 346 Gene3D G3DSA:1.10.260.40 9 107 2.2E-25 T 12-10-2018 PA257_1364 5b9d0820aecae916a396ab2b6d18deee 346 SUPERFAMILY SSF47413 16 85 3.85E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_1364 5b9d0820aecae916a396ab2b6d18deee 346 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 31 57 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PA257_1364 5b9d0820aecae916a396ab2b6d18deee 346 SMART SM00530 20 81 4.5E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_1364 5b9d0820aecae916a396ab2b6d18deee 346 Pfam PF13464 Domain of unknown function (DUF4115) 271 344 7.7E-24 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 PA257_2819 9a8a35a2c35f855488855c9a1deea8bb 212 SUPERFAMILY SSF102114 26 113 5.69E-6 T 12-10-2018 PA257_2819 9a8a35a2c35f855488855c9a1deea8bb 212 Gene3D G3DSA:3.20.20.70 9 154 2.4E-22 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2819 9a8a35a2c35f855488855c9a1deea8bb 212 Pfam PF13353 4Fe-4S single cluster domain 16 144 9.2E-23 T 12-10-2018 PA257_0219 f6b39d08b106a6b48a74ce8c7d9ad697 790 SUPERFAMILY SSF56935 51 790 1.43E-117 T 12-10-2018 PA257_0219 f6b39d08b106a6b48a74ce8c7d9ad697 790 Pfam PF00593 TonB dependent receptor 302 788 8.8E-38 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_0219 f6b39d08b106a6b48a74ce8c7d9ad697 790 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 773 790 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_0219 f6b39d08b106a6b48a74ce8c7d9ad697 790 Gene3D G3DSA:2.40.170.20 65 790 9.4E-146 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_0219 f6b39d08b106a6b48a74ce8c7d9ad697 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 181 5.9E-14 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_2140 582a77b41052061335656296b4908213 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.4E-29 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2140 582a77b41052061335656296b4908213 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PA257_2140 582a77b41052061335656296b4908213 94 Gene3D G3DSA:4.10.520.10 2 39 1.9E-7 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_2140 582a77b41052061335656296b4908213 94 Gene3D G3DSA:4.10.520.10 40 91 6.2E-27 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_2140 582a77b41052061335656296b4908213 94 SMART SM00411 1 91 7.5E-45 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2140 582a77b41052061335656296b4908213 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.813 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PA257_2140 582a77b41052061335656296b4908213 94 SUPERFAMILY SSF47729 1 92 3.68E-31 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_2140 582a77b41052061335656296b4908213 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.8E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2140 582a77b41052061335656296b4908213 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.8E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2140 582a77b41052061335656296b4908213 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.8E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2140 582a77b41052061335656296b4908213 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 94 2.1E-54 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 731 1.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 698 1.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 712 1.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 268 389 3.1E-22 T 12-10-2018 IPR000014 PAS domain PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 Pfam PF00512 His Kinase A (phospho-acceptor) domain 527 597 6.9E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 642 751 1.7E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 Gene3D G3DSA:3.30.450.20 267 398 2.4E-30 T 12-10-2018 PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SUPERFAMILY SSF55785 382 502 1.93E-10 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SMART SM00387 641 753 3.6E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 Gene3D G3DSA:3.30.565.10 599 754 2.5E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SMART SM00388 526 599 5.9E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 Gene3D G3DSA:3.30.450.20 399 518 1.2E-10 T 12-10-2018 PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SMART SM00086 340 383 4.8E-7 T 12-10-2018 IPR001610 PAC motif PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SMART SM00086 462 504 21.0 T 12-10-2018 IPR001610 PAC motif PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 Gene3D G3DSA:1.10.287.130 531 597 1.9E-18 T 12-10-2018 PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 Pfam PF08447 PAS fold 291 376 2.2E-15 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SUPERFAMILY SSF55874 590 751 7.07E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SUPERFAMILY SSF55785 273 386 9.99E-27 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SMART SM00091 391 457 3.2 T 12-10-2018 IPR000014 PAS domain PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SMART SM00091 268 334 2.8E-9 T 12-10-2018 IPR000014 PAS domain PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SMART SM00091 158 220 49.0 T 12-10-2018 IPR000014 PAS domain PA257_0899 96f3176a4a83f0517bfbecac6628dc0c 758 SUPERFAMILY SSF47384 522 597 5.89E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_1520 f5fd1f6498222e8df37df0a8999b5a62 300 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 180 196 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PA257_1520 f5fd1f6498222e8df37df0a8999b5a62 300 Gene3D G3DSA:1.20.58.410 1 51 5.1E-7 T 12-10-2018 PA257_1520 f5fd1f6498222e8df37df0a8999b5a62 300 Gene3D G3DSA:3.30.160.20 161 256 1.2E-95 T 12-10-2018 PA257_1520 f5fd1f6498222e8df37df0a8999b5a62 300 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 298 5.1E-142 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PA257_1520 f5fd1f6498222e8df37df0a8999b5a62 300 Pfam PF00472 RF-1 domain 163 272 8.3E-42 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PA257_1520 f5fd1f6498222e8df37df0a8999b5a62 300 SMART SM00937 20 130 1.2E-53 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 PA257_1520 f5fd1f6498222e8df37df0a8999b5a62 300 Gene3D G3DSA:3.30.70.1660 65 292 1.2E-95 T 12-10-2018 PA257_1520 f5fd1f6498222e8df37df0a8999b5a62 300 SUPERFAMILY SSF75620 2 297 3.53E-123 T 12-10-2018 PA257_1520 f5fd1f6498222e8df37df0a8999b5a62 300 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 4 300 31.97 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PA257_1520 f5fd1f6498222e8df37df0a8999b5a62 300 Pfam PF03462 PCRF domain 2 155 2.7E-46 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 750 771 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 294 365 6.4E-22 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 Pfam PF03477 ATP cone domain 33 128 2.6E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 Pfam PF03477 ATP cone domain 149 233 7.7E-8 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 Pfam PF02867 Ribonucleotide reductase, barrel domain 371 905 1.2E-182 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 297 907 3.0E-216 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 656 678 4.3E-48 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 684 707 4.3E-48 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 760 787 4.3E-48 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 446 465 4.3E-48 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 581 592 4.3E-48 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 618 641 4.3E-48 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 Gene3D G3DSA:3.20.70.20 221 916 1.6E-249 T 12-10-2018 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 SUPERFAMILY SSF48168 154 369 4.45E-64 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4652 0263f3de1a6c0db5f5e070c78b38c58a 963 SUPERFAMILY SSF51998 370 907 5.8E-182 T 12-10-2018 PA257_1423 4a717c3cb26606e2f75645b1b5d57b6a 162 Gene3D G3DSA:2.10.109.10 60 159 9.3E-8 T 12-10-2018 PA257_1423 4a717c3cb26606e2f75645b1b5d57b6a 162 SUPERFAMILY SSF51306 35 157 9.42E-20 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_1423 4a717c3cb26606e2f75645b1b5d57b6a 162 Pfam PF10502 Signal peptidase, peptidase S26 13 158 4.4E-51 T 12-10-2018 IPR019533 Peptidase S26 PA257_3809 b1d48bc644e33ccfabcb4fdacd372fe3 329 SMART SM01092 224 322 8.2E-28 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal PA257_3809 b1d48bc644e33ccfabcb4fdacd372fe3 329 Gene3D G3DSA:3.30.390.50 222 325 1.7E-26 T 12-10-2018 PA257_3809 b1d48bc644e33ccfabcb4fdacd372fe3 329 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 217 4.9E-50 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PA257_3809 b1d48bc644e33ccfabcb4fdacd372fe3 329 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 225 322 1.3E-14 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal PA257_3809 b1d48bc644e33ccfabcb4fdacd372fe3 329 SUPERFAMILY SSF56176 1 217 8.72E-59 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_3809 b1d48bc644e33ccfabcb4fdacd372fe3 329 Gene3D G3DSA:3.30.465.10 1 219 3.9E-80 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_3809 b1d48bc644e33ccfabcb4fdacd372fe3 329 SUPERFAMILY SSF55447 223 322 1.96E-27 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily PA257_4799 f9d4768f7536ddd35aa7e46c6a1fa86f 328 Gene3D G3DSA:3.20.20.70 1 328 1.3E-134 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4799 f9d4768f7536ddd35aa7e46c6a1fa86f 328 Pfam PF03060 Nitronate monooxygenase 6 311 6.3E-53 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PA257_4799 f9d4768f7536ddd35aa7e46c6a1fa86f 328 SUPERFAMILY SSF51412 5 318 1.01E-66 T 12-10-2018 PA257_4631 740454521ced06852f03f16383098b3b 163 Pfam PF12838 4Fe-4S dicluster domain 31 76 3.4E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_4631 740454521ced06852f03f16383098b3b 163 Pfam PF12838 4Fe-4S dicluster domain 101 148 4.8E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_4631 740454521ced06852f03f16383098b3b 163 Gene3D G3DSA:3.30.70.20 28 78 8.3E-9 T 12-10-2018 PA257_4631 740454521ced06852f03f16383098b3b 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 134 145 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_4631 740454521ced06852f03f16383098b3b 163 SUPERFAMILY SSF54862 29 151 4.19E-18 T 12-10-2018 PA257_4631 740454521ced06852f03f16383098b3b 163 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 21 155 22.029 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 PA257_4631 740454521ced06852f03f16383098b3b 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 31 42 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_4631 740454521ced06852f03f16383098b3b 163 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 18 149 1.1E-31 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 PA257_4631 740454521ced06852f03f16383098b3b 163 Gene3D G3DSA:3.30.70.20 90 162 5.2E-10 T 12-10-2018 PA257_2081 a744de31e722707d6467a011023b5d18 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 3.8E-45 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_2081 a744de31e722707d6467a011023b5d18 337 SUPERFAMILY SSF46689 283 331 9.41E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2081 a744de31e722707d6467a011023b5d18 337 SMART SM00342 247 329 1.7E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2081 a744de31e722707d6467a011023b5d18 337 Pfam PF12833 Helix-turn-helix domain 253 331 3.2E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2081 a744de31e722707d6467a011023b5d18 337 Gene3D G3DSA:1.10.10.60 227 336 2.2E-27 T 12-10-2018 PA257_2081 a744de31e722707d6467a011023b5d18 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 313 6.0E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_2081 a744de31e722707d6467a011023b5d18 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 329 6.0E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_6180 4b393f058881d56cd6e9fde115c9819f 298 Gene3D G3DSA:3.40.190.10 167 264 2.9E-58 T 12-10-2018 PA257_6180 4b393f058881d56cd6e9fde115c9819f 298 SUPERFAMILY SSF46785 2 86 7.48E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6180 4b393f058881d56cd6e9fde115c9819f 298 Gene3D G3DSA:3.40.190.10 88 289 2.9E-58 T 12-10-2018 PA257_6180 4b393f058881d56cd6e9fde115c9819f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6180 4b393f058881d56cd6e9fde115c9819f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6180 4b393f058881d56cd6e9fde115c9819f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6180 4b393f058881d56cd6e9fde115c9819f 298 SUPERFAMILY SSF53850 88 291 7.45E-39 T 12-10-2018 PA257_6180 4b393f058881d56cd6e9fde115c9819f 298 Pfam PF03466 LysR substrate binding domain 93 292 2.2E-24 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6180 4b393f058881d56cd6e9fde115c9819f 298 Gene3D G3DSA:1.10.10.10 1 87 2.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6180 4b393f058881d56cd6e9fde115c9819f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 6.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2941 21bc870a8180320f72dc1bf7d7666ee1 804 SUPERFAMILY SSF52540 389 701 2.52E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2941 21bc870a8180320f72dc1bf7d7666ee1 804 Gene3D G3DSA:1.10.10.10 732 797 1.6E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2941 21bc870a8180320f72dc1bf7d7666ee1 804 SUPERFAMILY SSF46785 736 799 1.29E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2941 21bc870a8180320f72dc1bf7d7666ee1 804 Gene3D G3DSA:3.40.50.300 413 714 6.5E-122 T 12-10-2018 PA257_2941 21bc870a8180320f72dc1bf7d7666ee1 804 Gene3D G3DSA:3.30.980.40 308 412 2.5E-37 T 12-10-2018 PA257_2941 21bc870a8180320f72dc1bf7d7666ee1 804 Pfam PF09397 Ftsk gamma domain 738 798 1.8E-26 T 12-10-2018 IPR018541 FtsK gamma domain PA257_2941 21bc870a8180320f72dc1bf7d7666ee1 804 Pfam PF01580 FtsK/SpoIIIE family 418 628 3.6E-63 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 PA257_2941 21bc870a8180320f72dc1bf7d7666ee1 804 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 193 2.2E-40 T 12-10-2018 IPR025199 DNA translocase FtsK, 4TM region PA257_2941 21bc870a8180320f72dc1bf7d7666ee1 804 SMART SM00843 736 801 7.7E-38 T 12-10-2018 IPR018541 FtsK gamma domain PA257_2689 eede35b3c5e9da26d8566a804ee35f49 190 Gene3D G3DSA:1.10.3600.10 10 108 6.3E-6 T 12-10-2018 IPR037042 Putative bacterial toxin ydaT superfamily PA257_2928 f4d742d7e031bc7a36c42c2680cb2270 206 SUPERFAMILY SSF101322 4 205 1.83E-73 T 12-10-2018 IPR035932 HflD-like superfamily PA257_2928 f4d742d7e031bc7a36c42c2680cb2270 206 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 205 33.88 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD PA257_2928 f4d742d7e031bc7a36c42c2680cb2270 206 Gene3D G3DSA:1.10.3890.10 2 205 2.6E-72 T 12-10-2018 IPR035932 HflD-like superfamily PA257_2928 f4d742d7e031bc7a36c42c2680cb2270 206 Pfam PF04356 Protein of unknown function (DUF489) 7 197 9.1E-71 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD PA257_2928 f4d742d7e031bc7a36c42c2680cb2270 206 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 196 4.0E-93 T 12-10-2018 PA257_1955 64de42879a9325d2920f950babbdf63a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 4.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1955 64de42879a9325d2920f950babbdf63a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 4.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1955 64de42879a9325d2920f950babbdf63a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 4.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1955 64de42879a9325d2920f950babbdf63a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 4.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1955 64de42879a9325d2920f950babbdf63a 304 Pfam PF03466 LysR substrate binding domain 99 301 2.7E-23 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1955 64de42879a9325d2920f950babbdf63a 304 SUPERFAMILY SSF46785 7 87 2.81E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1955 64de42879a9325d2920f950babbdf63a 304 Gene3D G3DSA:3.40.190.10 174 272 1.5E-59 T 12-10-2018 PA257_1955 64de42879a9325d2920f950babbdf63a 304 Gene3D G3DSA:1.10.10.10 2 88 2.2E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1955 64de42879a9325d2920f950babbdf63a 304 Gene3D G3DSA:3.40.190.10 95 296 1.5E-59 T 12-10-2018 PA257_1955 64de42879a9325d2920f950babbdf63a 304 SUPERFAMILY SSF53850 93 299 2.35E-41 T 12-10-2018 PA257_0885 1910c5adf2103a19d7389ffe7dd2f941 162 SUPERFAMILY SSF54427 20 149 6.18E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_0885 1910c5adf2103a19d7389ffe7dd2f941 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 17 162 2.0E-83 T 12-10-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PA257_0885 1910c5adf2103a19d7389ffe7dd2f941 162 Pfam PF03284 Phenazine biosynthesis protein A/B 14 162 1.5E-85 T 12-10-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PA257_0885 1910c5adf2103a19d7389ffe7dd2f941 162 Gene3D G3DSA:3.10.450.50 12 152 1.0E-44 T 12-10-2018 PA257_5614 83ed00de2f306d3730e1bde6e1ed4d3a 541 Gene3D G3DSA:3.10.20.310 40 130 4.5E-26 T 12-10-2018 PA257_5614 83ed00de2f306d3730e1bde6e1ed4d3a 541 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 192 485 3.0E-26 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal PA257_5614 83ed00de2f306d3730e1bde6e1ed4d3a 541 Gene3D G3DSA:2.40.160.50 161 540 6.7E-74 T 12-10-2018 PA257_5614 83ed00de2f306d3730e1bde6e1ed4d3a 541 Pfam PF08479 POTRA domain, ShlB-type 57 130 1.6E-22 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 SUPERFAMILY SSF52279 394 650 5.23E-60 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 SMART SM01217 684 753 1.8E-30 T 12-10-2018 IPR026891 Fibronectin type III-like domain PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 SUPERFAMILY SSF51445 32 392 2.32E-98 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 272 289 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 Gene3D G3DSA:3.20.20.300 29 368 2.6E-114 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 119 138 2.9E-22 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 202 218 2.9E-22 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 165 181 2.9E-22 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 272 290 2.9E-22 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 100 116 2.9E-22 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 Gene3D G3DSA:3.40.50.1700 380 649 5.2E-97 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 49 349 1.0E-82 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 Pfam PF14310 Fibronectin type III-like domain 685 753 7.2E-22 T 12-10-2018 IPR026891 Fibronectin type III-like domain PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 394 647 8.1E-61 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PA257_4048 60629cde5830bb69ad6eccb98c25a836 764 Gene3D G3DSA:2.60.40.10 650 763 4.6E-33 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_5376 f8b2d1fc87a90929334781190f3b50c4 333 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 37 315 3.0E-20 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PA257_5376 f8b2d1fc87a90929334781190f3b50c4 333 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 11 309 9.8E-41 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PA257_5995 bb80baca4ca0365242d3cbcdc194991a 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 214 1.1E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_5995 bb80baca4ca0365242d3cbcdc194991a 221 Gene3D G3DSA:1.10.10.10 124 218 7.1E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5995 bb80baca4ca0365242d3cbcdc194991a 221 SUPERFAMILY SSF52172 1 118 4.13E-35 T 12-10-2018 IPR011006 CheY-like superfamily PA257_5995 bb80baca4ca0365242d3cbcdc194991a 221 Pfam PF00072 Response regulator receiver domain 3 112 3.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5995 bb80baca4ca0365242d3cbcdc194991a 221 SUPERFAMILY SSF46894 125 216 2.24E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_5995 bb80baca4ca0365242d3cbcdc194991a 221 SMART SM00448 1 112 1.3E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5995 bb80baca4ca0365242d3cbcdc194991a 221 SMART SM00862 145 216 9.3E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_5995 bb80baca4ca0365242d3cbcdc194991a 221 Gene3D G3DSA:3.40.50.2300 1 121 1.2E-35 T 12-10-2018 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 Gene3D G3DSA:1.10.8.60 330 403 2.5E-16 T 12-10-2018 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 369 378 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_3734 eab6cb178482b1265d63a231b8927a12 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 245 260 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 SMART SM00091 19 86 0.0015 T 12-10-2018 IPR000014 PAS domain PA257_3734 eab6cb178482b1265d63a231b8927a12 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 1.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 SMART SM00382 178 323 9.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3734 eab6cb178482b1265d63a231b8927a12 476 SUPERFAMILY SSF52540 158 397 1.21E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3734 eab6cb178482b1265d63a231b8927a12 476 Gene3D G3DSA:3.40.50.300 143 329 9.3E-64 T 12-10-2018 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 Pfam PF08448 PAS fold 26 117 6.0E-8 T 12-10-2018 IPR013656 PAS fold-4 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 SUPERFAMILY SSF55785 11 116 6.09E-13 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3734 eab6cb178482b1265d63a231b8927a12 476 SUPERFAMILY SSF46689 369 468 1.86E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 Gene3D G3DSA:3.30.450.20 6 118 4.2E-10 T 12-10-2018 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 Pfam PF02954 Bacterial regulatory protein, Fis family 426 463 2.8E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 182 195 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 Pfam PF00158 Sigma-54 interaction domain 159 326 2.5E-63 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_3734 eab6cb178482b1265d63a231b8927a12 476 Gene3D G3DSA:1.10.10.60 419 471 3.5E-14 T 12-10-2018 PA257_0880 fef065bbbff6db9570dfbc43d1b3b80b 278 PIRSF PIRSF016184 1 278 9.7E-82 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_0880 fef065bbbff6db9570dfbc43d1b3b80b 278 Pfam PF02567 Phenazine biosynthesis-like protein 7 274 3.0E-85 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_0880 fef065bbbff6db9570dfbc43d1b3b80b 278 SUPERFAMILY SSF54506 2 277 2.79E-67 T 12-10-2018 PA257_0880 fef065bbbff6db9570dfbc43d1b3b80b 278 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 273 6.1E-56 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_0880 fef065bbbff6db9570dfbc43d1b3b80b 278 Gene3D G3DSA:3.10.310.10 7 119 1.3E-97 T 12-10-2018 PA257_0880 fef065bbbff6db9570dfbc43d1b3b80b 278 Gene3D G3DSA:3.10.310.10 120 266 1.3E-97 T 12-10-2018 PA257_1290 c1bb81b549e154807aa2d335ad828f0e 468 Gene3D G3DSA:1.20.1250.20 6 239 3.4E-84 T 12-10-2018 PA257_1290 c1bb81b549e154807aa2d335ad828f0e 468 Gene3D G3DSA:1.20.1250.20 240 467 1.8E-75 T 12-10-2018 PA257_1290 c1bb81b549e154807aa2d335ad828f0e 468 TIGRFAM TIGR00886 2A0108: nitrite transporter 38 420 3.3E-119 T 12-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 PA257_1290 c1bb81b549e154807aa2d335ad828f0e 468 Pfam PF07690 Major Facilitator Superfamily 46 378 2.7E-12 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1290 c1bb81b549e154807aa2d335ad828f0e 468 SUPERFAMILY SSF103473 21 460 3.27E-36 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1731 ef62d597c13a9f729070b5689559ea6e 481 SUPERFAMILY SSF53448 1 281 8.56E-69 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_1731 ef62d597c13a9f729070b5689559ea6e 481 Gene3D G3DSA:2.60.120.10 347 454 5.3E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1731 ef62d597c13a9f729070b5689559ea6e 481 Pfam PF01050 Mannose-6-phosphate isomerase 314 464 6.7E-77 T 12-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 PA257_1731 ef62d597c13a9f729070b5689559ea6e 481 Gene3D G3DSA:3.90.550.10 1 346 1.3E-118 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_1731 ef62d597c13a9f729070b5689559ea6e 481 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 468 3.2E-233 T 12-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 PA257_1731 ef62d597c13a9f729070b5689559ea6e 481 SUPERFAMILY SSF51182 184 469 4.67E-88 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_1731 ef62d597c13a9f729070b5689559ea6e 481 Pfam PF00483 Nucleotidyl transferase 3 286 6.0E-77 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 Gene3D G3DSA:1.10.1220.110 126 179 1.5E-182 T 12-10-2018 PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 PIRSF PIRSF000137 11 567 1.7E-150 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 SUPERFAMILY SSF54373 319 504 4.71E-50 T 12-10-2018 PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 Gene3D G3DSA:4.10.450.10 63 225 1.5E-182 T 12-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 Gene3D G3DSA:3.30.410.40 180 501 1.5E-182 T 12-10-2018 PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 SUPERFAMILY SSF51905 23 562 2.02E-89 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 111 134 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 283 297 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 Pfam PF05199 GMC oxidoreductase 418 554 2.7E-43 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 Pfam PF00732 GMC oxidoreductase 30 323 2.3E-86 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_1047 9b5882465300ac6651dc6433a41f9cf8 580 Gene3D G3DSA:3.50.50.60 30 558 1.5E-182 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6279 106d4d26ac544b085948b78784428868 391 Gene3D G3DSA:3.30.9.10 92 304 2.8E-21 T 12-10-2018 PA257_6279 106d4d26ac544b085948b78784428868 391 Pfam PF01266 FAD dependent oxidoreductase 8 314 2.3E-19 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_6279 106d4d26ac544b085948b78784428868 391 SUPERFAMILY SSF51905 7 289 5.83E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6279 106d4d26ac544b085948b78784428868 391 Gene3D G3DSA:3.50.50.60 8 221 2.8E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2919 772325bbbe8287dcb6b879cff93c7efd 171 Pfam PF14539 Domain of unknown function (DUF4442) 26 159 2.1E-33 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 PA257_2919 772325bbbe8287dcb6b879cff93c7efd 171 SUPERFAMILY SSF54637 26 163 7.46E-20 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_2919 772325bbbe8287dcb6b879cff93c7efd 171 Gene3D G3DSA:3.10.129.10 11 161 6.0E-39 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 Pfam PF00873 AcrB/AcrD/AcrF family 8 1005 2.9E-157 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 SUPERFAMILY SSF82693 553 653 2.49E-8 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 4.6E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 4.6E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 4.6E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 4.6E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 4.6E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 4.6E-22 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 Gene3D G3DSA:3.30.70.1430 44 800 1.9E-243 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 SUPERFAMILY SSF82714 707 790 5.23E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 Gene3D G3DSA:1.20.1640.10 15 509 1.9E-243 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 SUPERFAMILY SSF82693 44 139 4.36E-19 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 Gene3D G3DSA:3.30.2090.10 704 792 1.9E-243 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 Gene3D G3DSA:3.30.70.1440 654 852 1.9E-243 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 Gene3D G3DSA:1.20.1640.10 510 1004 1.9E-243 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 Gene3D G3DSA:3.30.70.1320 140 330 1.9E-243 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 Gene3D G3DSA:3.30.70.1430 554 653 1.9E-243 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 SUPERFAMILY SSF82866 789 1010 3.66E-44 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 SUPERFAMILY SSF82714 189 267 7.85E-10 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 SUPERFAMILY SSF82866 295 492 8.24E-32 T 12-10-2018 PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 Gene3D G3DSA:3.30.2090.10 183 272 1.9E-243 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0185 269b0cbf02414b163e9104412f2e196b 1015 SUPERFAMILY SSF82693 141 327 1.39E-17 T 12-10-2018 PA257_2110 939d43e7c5c685bbfaf9dd7996a4d47d 281 SUPERFAMILY SSF161098 13 281 1.78E-61 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2110 939d43e7c5c685bbfaf9dd7996a4d47d 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 274 1.6E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_2110 939d43e7c5c685bbfaf9dd7996a4d47d 281 Gene3D G3DSA:1.10.3720.10 8 272 3.8E-50 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2354 662cb72a79f033873daccf8bc8836398 249 PIRSF PIRSF000090 1 249 7.1E-83 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 PA257_2354 662cb72a79f033873daccf8bc8836398 249 Gene3D G3DSA:3.40.50.620 1 247 1.6E-87 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2354 662cb72a79f033873daccf8bc8836398 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 3.6E-46 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PA257_2354 662cb72a79f033873daccf8bc8836398 249 SUPERFAMILY SSF52402 1 244 6.42E-85 T 12-10-2018 PA257_2354 662cb72a79f033873daccf8bc8836398 249 SMART SM00893 23 211 7.4E-68 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PA257_2354 662cb72a79f033873daccf8bc8836398 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 PA257_3204 3fa0299992f761a2230a7b35f2cb3ff5 337 Pfam PF13523 Acetyltransferase (GNAT) domain 170 315 1.4E-55 T 12-10-2018 PA257_3204 3fa0299992f761a2230a7b35f2cb3ff5 337 Gene3D G3DSA:3.40.630.30 130 329 1.6E-68 T 12-10-2018 PA257_3204 3fa0299992f761a2230a7b35f2cb3ff5 337 SUPERFAMILY SSF55729 135 329 2.79E-64 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_3204 3fa0299992f761a2230a7b35f2cb3ff5 337 SMART SM01006 167 214 3.5E-21 T 12-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain PA257_3726 2ed01410f2503e8f3b389267611e7f8e 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PA257_3726 2ed01410f2503e8f3b389267611e7f8e 265 SUPERFAMILY SSF52096 3 263 4.83E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_3726 2ed01410f2503e8f3b389267611e7f8e 265 Gene3D G3DSA:3.90.226.10 3 205 5.1E-60 T 12-10-2018 PA257_3726 2ed01410f2503e8f3b389267611e7f8e 265 Gene3D G3DSA:1.10.12.10 206 265 5.0E-23 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PA257_3726 2ed01410f2503e8f3b389267611e7f8e 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 263 2.0E-53 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_4804 0d6c600f7a655279825ee0c288534b13 135 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 126 1.9E-16 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PA257_4804 0d6c600f7a655279825ee0c288534b13 135 Pfam PF03061 Thioesterase superfamily 51 121 1.1E-12 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_4804 0d6c600f7a655279825ee0c288534b13 135 SUPERFAMILY SSF54637 11 130 9.53E-28 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_4804 0d6c600f7a655279825ee0c288534b13 135 Gene3D G3DSA:3.10.129.10 7 135 6.7E-36 T 12-10-2018 PA257_1255 a246250c119cc465b8e57b2782a9428a 239 PIRSF PIRSF029636 10 239 3.5E-95 T 12-10-2018 IPR016929 Uncharacterised conserved protein UCP029636 PA257_1255 a246250c119cc465b8e57b2782a9428a 239 Pfam PF15579 Immunity protein 52 139 234 2.1E-25 T 12-10-2018 IPR028969 Immunity protein 52 PA257_1818 a47b1f541044c43025b40546271a2580 221 Hamap MF_01584 UPF0502 protein YceH [yceH]. 14 219 30.28 T 12-10-2018 IPR007432 Protein of unknown function DUF480 PA257_1818 a47b1f541044c43025b40546271a2580 221 Pfam PF04337 Protein of unknown function, DUF480 14 158 2.8E-55 T 12-10-2018 IPR007432 Protein of unknown function DUF480 PA257_1818 a47b1f541044c43025b40546271a2580 221 Gene3D G3DSA:1.10.10.10 98 175 6.4E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1818 a47b1f541044c43025b40546271a2580 221 SUPERFAMILY SSF46785 13 90 1.34E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1818 a47b1f541044c43025b40546271a2580 221 SUPERFAMILY SSF46785 95 174 2.68E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1818 a47b1f541044c43025b40546271a2580 221 Gene3D G3DSA:1.10.10.10 1 97 9.7E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 Gene3D G3DSA:1.20.120.140 157 455 8.3E-116 T 12-10-2018 PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 SMART SM00962 256 457 6.2E-122 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 185 456 1.1E-109 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 184 457 62.412 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 SMART SM00963 160 241 2.5E-24 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 430 443 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 SUPERFAMILY SSF52540 254 456 7.02E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 SMART SM00382 255 402 2.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 Pfam PF02881 SRP54-type protein, helical bundle domain 172 237 4.4E-13 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 Gene3D G3DSA:3.40.50.300 256 445 8.3E-116 T 12-10-2018 PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 SUPERFAMILY SSF47364 155 235 1.07E-20 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 PA257_0449 a9920b1b07413e7ea011aa5deb6d82e7 462 Pfam PF00448 SRP54-type protein, GTPase domain 257 456 3.6E-77 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PA257_3866 aacce7d5416151b73860bba0205b1581 132 Gene3D G3DSA:1.20.58.1610 2 122 5.6E-36 T 12-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_3866 aacce7d5416151b73860bba0205b1581 132 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 121 1.4E-29 T 12-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_3866 aacce7d5416151b73860bba0205b1581 132 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 5 122 18.76 T 12-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 PA257_2766 aaaa5aab9ba9c30b02ce8e134b07ef8f 322 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 74 6.6E-7 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_2766 aaaa5aab9ba9c30b02ce8e134b07ef8f 322 Pfam PF00378 Enoyl-CoA hydratase/isomerase 124 293 7.9E-35 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_2766 aaaa5aab9ba9c30b02ce8e134b07ef8f 322 Gene3D G3DSA:3.90.226.10 3 318 6.8E-69 T 12-10-2018 PA257_2766 aaaa5aab9ba9c30b02ce8e134b07ef8f 322 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 137 157 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PA257_2766 aaaa5aab9ba9c30b02ce8e134b07ef8f 322 SUPERFAMILY SSF52096 6 295 2.87E-61 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_4202 7627a836e6621b42614e016f93a68cd8 86 SUPERFAMILY SSF81343 2 86 1.8E-20 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4202 7627a836e6621b42614e016f93a68cd8 86 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 1 84 1.7E-24 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4202 7627a836e6621b42614e016f93a68cd8 86 PIRSF PIRSF000178 1 86 2.4E-16 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4202 7627a836e6621b42614e016f93a68cd8 86 Gene3D G3DSA:1.20.1300.10 1 86 2.2E-26 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4202 7627a836e6621b42614e016f93a68cd8 86 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 80 8.4E-18 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4202 7627a836e6621b42614e016f93a68cd8 86 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 42 55 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 SUPERFAMILY SSF52540 97 382 1.3E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 50.076 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 1.4E-44 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 Gene3D G3DSA:1.20.150.20 384 514 1.6E-48 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 SUPERFAMILY SSF47917 384 512 6.02E-45 T 12-10-2018 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 Gene3D G3DSA:3.40.50.300 95 383 3.5E-130 T 12-10-2018 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 PIRSF PIRSF039088 2 514 2.6E-233 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 513 3.7E-252 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 1.1E-72 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 Gene3D G3DSA:2.40.30.20 2 94 2.5E-32 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 2.7E-16 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_6961 b568bae2c12809dee0eead7079fe75f9 514 SUPERFAMILY SSF50615 11 95 2.16E-28 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PA257_3569 640950d2492aadd8f1183f399a86f2b2 415 Pfam PF00107 Zinc-binding dehydrogenase 189 258 1.1E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_3569 640950d2492aadd8f1183f399a86f2b2 415 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 139 4.6E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_3569 640950d2492aadd8f1183f399a86f2b2 415 Gene3D G3DSA:3.90.180.10 4 371 1.3E-113 T 12-10-2018 PA257_3569 640950d2492aadd8f1183f399a86f2b2 415 Gene3D G3DSA:3.40.50.720 169 343 1.3E-113 T 12-10-2018 PA257_3569 640950d2492aadd8f1183f399a86f2b2 415 SMART SM00829 7 379 0.0014 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_3569 640950d2492aadd8f1183f399a86f2b2 415 SUPERFAMILY SSF50129 1 193 2.28E-54 T 12-10-2018 IPR011032 GroES-like superfamily PA257_3569 640950d2492aadd8f1183f399a86f2b2 415 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PA257_3569 640950d2492aadd8f1183f399a86f2b2 415 SUPERFAMILY SSF51735 156 346 5.92E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1026 3fc70953434a7d6017f926d2f39decff 229 Pfam PF10979 Protein of unknown function (DUF2786) 5 45 3.8E-15 T 12-10-2018 IPR024498 Domain of unknown function DUF2786 PA257_1026 3fc70953434a7d6017f926d2f39decff 229 PIRSF PIRSF028111 1 229 1.0E-86 T 12-10-2018 IPR016868 Bacteriophage B3, Orf5 PA257_4544 0b6204db846e518bed8ba3afd47bc1c4 344 SUPERFAMILY SSF54506 1 333 7.4E-109 T 12-10-2018 PA257_4544 0b6204db846e518bed8ba3afd47bc1c4 344 Pfam PF05544 Proline racemase 9 334 8.1E-140 T 12-10-2018 IPR008794 Proline racemase family PA257_4544 0b6204db846e518bed8ba3afd47bc1c4 344 Gene3D G3DSA:3.10.310.10 144 311 1.9E-109 T 12-10-2018 PA257_4544 0b6204db846e518bed8ba3afd47bc1c4 344 Gene3D G3DSA:3.10.310.10 8 333 1.9E-109 T 12-10-2018 PA257_4544 0b6204db846e518bed8ba3afd47bc1c4 344 PIRSF PIRSF029792 1 336 8.8E-117 T 12-10-2018 IPR008794 Proline racemase family PA257_0739 4a1ffbb2d222ae871208faf3d903cedb 283 Pfam PF00149 Calcineurin-like phosphoesterase 2 150 1.4E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PA257_0739 4a1ffbb2d222ae871208faf3d903cedb 283 SUPERFAMILY SSF56300 1 257 8.55E-58 T 12-10-2018 PA257_0739 4a1ffbb2d222ae871208faf3d903cedb 283 Gene3D G3DSA:3.60.21.10 1 279 2.1E-79 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like PA257_0739 4a1ffbb2d222ae871208faf3d903cedb 283 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 272 49.983 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PA257_0739 4a1ffbb2d222ae871208faf3d903cedb 283 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 1.7E-96 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PA257_0739 4a1ffbb2d222ae871208faf3d903cedb 283 PIRSF PIRSF000903 1 276 5.8E-121 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PA257_3197 51b9aae58ae3ab7d5ebbf5d1fc021c81 304 SUPERFAMILY SSF53850 90 297 2.33E-47 T 12-10-2018 PA257_3197 51b9aae58ae3ab7d5ebbf5d1fc021c81 304 SUPERFAMILY SSF46785 3 113 5.45E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3197 51b9aae58ae3ab7d5ebbf5d1fc021c81 304 Gene3D G3DSA:1.10.10.10 3 89 1.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3197 51b9aae58ae3ab7d5ebbf5d1fc021c81 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.0E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3197 51b9aae58ae3ab7d5ebbf5d1fc021c81 304 Gene3D G3DSA:3.40.190.290 92 295 1.3E-63 T 12-10-2018 PA257_3197 51b9aae58ae3ab7d5ebbf5d1fc021c81 304 Pfam PF03466 LysR substrate binding domain 91 296 1.2E-47 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3926 b26cb2695f6933aad2eeff7a3978ca8a 341 Gene3D G3DSA:3.90.226.10 95 292 7.7E-42 T 12-10-2018 PA257_3926 b26cb2695f6933aad2eeff7a3978ca8a 341 Pfam PF01343 Peptidase family S49 152 300 3.2E-44 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PA257_3926 b26cb2695f6933aad2eeff7a3978ca8a 341 Gene3D G3DSA:3.40.1750.20 192 256 7.7E-42 T 12-10-2018 PA257_3926 b26cb2695f6933aad2eeff7a3978ca8a 341 SUPERFAMILY SSF52096 88 289 1.01E-27 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_3926 b26cb2695f6933aad2eeff7a3978ca8a 341 Pfam PF08496 Peptidase family S49 N-terminal 2 148 1.1E-53 T 12-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 Gene3D G3DSA:2.170.230.10 154 215 4.0E-69 T 12-10-2018 PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 216 235 5.4E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 5.4E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 5.4E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 ProSitePatterns PS00761 Signal peptidases I signature 3. 221 234 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 Pfam PF00717 Peptidase S24-like 85 168 1.4E-21 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 SUPERFAMILY SSF51306 77 271 2.14E-64 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 Gene3D G3DSA:2.10.109.10 77 266 4.0E-69 T 12-10-2018 PA257_5141 1a8f285b1fe925affcc7a8e01be33530 284 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 64 266 2.6E-49 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PA257_6788 a77679f1bba75e6d525108b3bd69d010 450 SUPERFAMILY SSF51905 19 229 9.39E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6788 a77679f1bba75e6d525108b3bd69d010 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 22 41 3.3E-5 T 12-10-2018 PA257_6788 a77679f1bba75e6d525108b3bd69d010 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 3.3E-5 T 12-10-2018 PA257_6788 a77679f1bba75e6d525108b3bd69d010 450 Gene3D G3DSA:3.50.50.60 15 297 6.1E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6788 a77679f1bba75e6d525108b3bd69d010 450 Gene3D G3DSA:3.50.50.60 320 428 3.7E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6788 a77679f1bba75e6d525108b3bd69d010 450 SUPERFAMILY SSF51905 182 418 2.11E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6788 a77679f1bba75e6d525108b3bd69d010 450 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 23 211 1.9E-27 T 12-10-2018 PA257_6788 a77679f1bba75e6d525108b3bd69d010 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 21 43 2.6E-9 T 12-10-2018 PA257_6788 a77679f1bba75e6d525108b3bd69d010 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 2.6E-9 T 12-10-2018 PA257_6788 a77679f1bba75e6d525108b3bd69d010 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.6E-9 T 12-10-2018 PA257_4946 d4b2485a238fd87251e652b370711864 448 SUPERFAMILY SSF55909 3 446 6.38E-207 T 12-10-2018 PA257_4946 d4b2485a238fd87251e652b370711864 448 Gene3D G3DSA:3.75.10.20 1 448 2.8E-208 T 12-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 PA257_4946 d4b2485a238fd87251e652b370711864 448 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 446 4.4E-248 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 PA257_4946 d4b2485a238fd87251e652b370711864 448 Pfam PF04996 Succinylarginine dihydrolase 3 446 3.3E-225 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 PA257_4946 d4b2485a238fd87251e652b370711864 448 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 447 60.684 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 PA257_3538 0052ff8d2dc16d2f926fa0b48e9d84f7 137 Gene3D G3DSA:3.10.580.10 1 135 1.3E-33 T 12-10-2018 PA257_3538 0052ff8d2dc16d2f926fa0b48e9d84f7 137 SMART SM00116 10 57 4.1E-8 T 12-10-2018 IPR000644 CBS domain PA257_3538 0052ff8d2dc16d2f926fa0b48e9d84f7 137 SMART SM00116 74 122 1.5E-4 T 12-10-2018 IPR000644 CBS domain PA257_3538 0052ff8d2dc16d2f926fa0b48e9d84f7 137 SUPERFAMILY SSF54631 1 120 7.45E-31 T 12-10-2018 PA257_3538 0052ff8d2dc16d2f926fa0b48e9d84f7 137 Pfam PF00571 CBS domain 67 118 1.8E-6 T 12-10-2018 IPR000644 CBS domain PA257_3538 0052ff8d2dc16d2f926fa0b48e9d84f7 137 Pfam PF00571 CBS domain 3 53 2.9E-12 T 12-10-2018 IPR000644 CBS domain PA257_2479 380460af183c7193c2fd67ac0882c5d2 323 Pfam PF03466 LysR substrate binding domain 89 293 3.0E-42 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2479 380460af183c7193c2fd67ac0882c5d2 323 Gene3D G3DSA:1.10.10.10 3 90 1.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2479 380460af183c7193c2fd67ac0882c5d2 323 SUPERFAMILY SSF53850 90 294 9.41E-41 T 12-10-2018 PA257_2479 380460af183c7193c2fd67ac0882c5d2 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 3.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2479 380460af183c7193c2fd67ac0882c5d2 323 SUPERFAMILY SSF46785 5 111 3.6E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2479 380460af183c7193c2fd67ac0882c5d2 323 Gene3D G3DSA:3.40.190.290 91 292 3.5E-56 T 12-10-2018 PA257_6415 52e954b634f34b8077f7d5e718487df3 190 Pfam PF13511 Domain of unknown function (DUF4124) 8 57 9.7E-15 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 PA257_1425 efb3d4c450896a04f053d5cdf329683c 212 Gene3D G3DSA:1.10.3470.10 1 212 1.4E-43 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_1425 efb3d4c450896a04f053d5cdf329683c 212 SUPERFAMILY SSF81345 4 208 1.7E-44 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_1425 efb3d4c450896a04f053d5cdf329683c 212 Pfam PF01032 FecCD transport family 3 208 1.1E-42 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 PIRSF PIRSF001435 1 212 1.6E-52 T 12-10-2018 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 3.2E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.4E-20 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Gene3D G3DSA:1.10.1670.10 11 203 4.2E-78 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Gene3D G3DSA:1.10.340.30 21 132 4.2E-78 T 12-10-2018 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 SUPERFAMILY SSF48150 3 208 1.88E-73 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 SMART SM00478 38 185 1.8E-59 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.768 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Pfam PF00633 Helix-hairpin-helix motif 100 127 7.1E-10 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 SMART SM00525 186 206 5.2E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 PA257_1772 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 TIGRFAM TIGR01083 nth: endonuclease III 5 194 2.6E-86 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 PA257_2032 1abbcb865a7dd83b3876b7af544b7b5e 698 Gene3D G3DSA:3.90.226.10 335 562 7.8E-64 T 12-10-2018 PA257_2032 1abbcb865a7dd83b3876b7af544b7b5e 698 SMART SM00245 336 545 3.1E-56 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 PA257_2032 1abbcb865a7dd83b3876b7af544b7b5e 698 SMART SM00228 253 330 6.7E-5 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_2032 1abbcb865a7dd83b3876b7af544b7b5e 698 Gene3D G3DSA:2.30.42.10 242 327 3.9E-11 T 12-10-2018 PA257_2032 1abbcb865a7dd83b3876b7af544b7b5e 698 SUPERFAMILY SSF50156 244 328 3.84E-9 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 PA257_2032 1abbcb865a7dd83b3876b7af544b7b5e 698 SUPERFAMILY SSF52096 188 549 2.15E-69 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_2032 1abbcb865a7dd83b3876b7af544b7b5e 698 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 246 326 1.1E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_2032 1abbcb865a7dd83b3876b7af544b7b5e 698 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 549 689 6.3E-37 T 12-10-2018 IPR020992 Tail specific protease, C-terminal PA257_2032 1abbcb865a7dd83b3876b7af544b7b5e 698 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 210 565 3.5E-96 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PA257_2032 1abbcb865a7dd83b3876b7af544b7b5e 698 Pfam PF03572 Peptidase family S41 370 543 3.6E-51 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 PA257_3761 b65aa9982d1714316f5ef3fbdb53232d 216 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 126 213 5.0E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3761 b65aa9982d1714316f5ef3fbdb53232d 216 Gene3D G3DSA:3.30.565.10 85 213 1.3E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3761 b65aa9982d1714316f5ef3fbdb53232d 216 SMART SM00387 123 214 5.4E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3761 b65aa9982d1714316f5ef3fbdb53232d 216 SUPERFAMILY SSF55874 92 212 1.17E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3761 b65aa9982d1714316f5ef3fbdb53232d 216 Pfam PF07730 Histidine kinase 22 85 2.9E-8 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PA257_2673 26d0e402ec6a4318a7d4c3942e187067 134 Gene3D G3DSA:3.10.129.10 5 134 6.9E-41 T 12-10-2018 PA257_2673 26d0e402ec6a4318a7d4c3942e187067 134 SUPERFAMILY SSF54637 5 133 1.25E-31 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_2673 26d0e402ec6a4318a7d4c3942e187067 134 Pfam PF13279 Thioesterase-like superfamily 14 133 2.7E-14 T 12-10-2018 PA257_2393 91a737f9e6a2567b1e3f15b8952f4f86 278 SUPERFAMILY SSF46689 224 274 3.32E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2393 91a737f9e6a2567b1e3f15b8952f4f86 278 SUPERFAMILY SSF51215 15 154 9.42E-28 T 12-10-2018 IPR037923 Transcription regulator HTH-like PA257_2393 91a737f9e6a2567b1e3f15b8952f4f86 278 Pfam PF12833 Helix-turn-helix domain 194 272 3.7E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2393 91a737f9e6a2567b1e3f15b8952f4f86 278 SMART SM00342 188 270 1.7E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2393 91a737f9e6a2567b1e3f15b8952f4f86 278 Gene3D G3DSA:1.10.10.60 173 275 7.4E-28 T 12-10-2018 PA257_2393 91a737f9e6a2567b1e3f15b8952f4f86 278 Pfam PF02311 AraC-like ligand binding domain 16 148 8.0E-31 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_2393 91a737f9e6a2567b1e3f15b8952f4f86 278 SUPERFAMILY SSF46689 175 222 6.54E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3325 8b24d1c59a053c10239b2a8005058f13 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 2.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3325 8b24d1c59a053c10239b2a8005058f13 297 Gene3D G3DSA:3.40.190.10 91 288 1.1E-62 T 12-10-2018 PA257_3325 8b24d1c59a053c10239b2a8005058f13 297 SUPERFAMILY SSF53850 90 291 4.52E-46 T 12-10-2018 PA257_3325 8b24d1c59a053c10239b2a8005058f13 297 SUPERFAMILY SSF46785 5 87 1.87E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3325 8b24d1c59a053c10239b2a8005058f13 297 Gene3D G3DSA:1.10.10.10 3 86 1.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3325 8b24d1c59a053c10239b2a8005058f13 297 Pfam PF03466 LysR substrate binding domain 88 289 1.5E-45 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3325 8b24d1c59a053c10239b2a8005058f13 297 Gene3D G3DSA:3.40.190.10 161 263 1.1E-62 T 12-10-2018 PA257_4491 68d0baae6fdb6b3ed4ed064ade4984e3 153 Gene3D G3DSA:3.30.428.10 5 140 1.2E-36 T 12-10-2018 IPR036265 HIT-like superfamily PA257_4491 68d0baae6fdb6b3ed4ed064ade4984e3 153 Pfam PF01230 HIT domain 18 112 2.5E-20 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_4491 68d0baae6fdb6b3ed4ed064ade4984e3 153 ProSitePatterns PS00892 HIT domain signature. 91 109 - T 12-10-2018 IPR019808 Histidine triad, conserved site PA257_4491 68d0baae6fdb6b3ed4ed064ade4984e3 153 PRINTS PR00332 Histidine triad family signature 30 48 6.4E-9 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_4491 68d0baae6fdb6b3ed4ed064ade4984e3 153 PRINTS PR00332 Histidine triad family signature 98 108 6.4E-9 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_4491 68d0baae6fdb6b3ed4ed064ade4984e3 153 PRINTS PR00332 Histidine triad family signature 9 25 6.4E-9 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_4491 68d0baae6fdb6b3ed4ed064ade4984e3 153 SUPERFAMILY SSF54197 6 138 3.71E-35 T 12-10-2018 IPR036265 HIT-like superfamily PA257_4539 70919ce890f4d0689961d2326772737a 273 Gene3D G3DSA:3.40.190.10 120 224 8.1E-53 T 12-10-2018 PA257_4539 70919ce890f4d0689961d2326772737a 273 SMART SM00062 36 262 2.1E-44 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_4539 70919ce890f4d0689961d2326772737a 273 SUPERFAMILY SSF53850 8 261 2.06E-57 T 12-10-2018 PA257_4539 70919ce890f4d0689961d2326772737a 273 Gene3D G3DSA:3.40.190.10 34 258 8.1E-53 T 12-10-2018 PA257_4539 70919ce890f4d0689961d2326772737a 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 260 3.8E-48 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 Pfam PF00561 alpha/beta hydrolase fold 66 317 1.3E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 150 163 1.5E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 1.5E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 106 1.5E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 Gene3D G3DSA:3.40.50.1820 19 332 1.2E-114 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 SUPERFAMILY SSF53474 45 329 6.97E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 PRINTS PR00412 Epoxide hydrolase signature 91 106 1.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 PRINTS PR00412 Epoxide hydrolase signature 150 163 1.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 PRINTS PR00412 Epoxide hydrolase signature 136 149 1.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 PRINTS PR00412 Epoxide hydrolase signature 306 328 1.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_2246 6049177c3b5384069b1d9eb7d64b2214 333 PRINTS PR00412 Epoxide hydrolase signature 71 89 1.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_1963 4f1a0e5a21505880b217f1ed8d58ca7c 285 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 29 285 4.0E-113 T 12-10-2018 IPR030836 Putative ABC transporter periplasmic binding protein PhnD-like PA257_1963 4f1a0e5a21505880b217f1ed8d58ca7c 285 Gene3D G3DSA:3.40.190.10 32 245 1.9E-62 T 12-10-2018 PA257_1963 4f1a0e5a21505880b217f1ed8d58ca7c 285 SUPERFAMILY SSF53850 51 233 4.44E-41 T 12-10-2018 PA257_1963 4f1a0e5a21505880b217f1ed8d58ca7c 285 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 4 244 2.7E-77 T 12-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 PA257_1963 4f1a0e5a21505880b217f1ed8d58ca7c 285 Gene3D G3DSA:3.40.190.10 112 219 1.9E-62 T 12-10-2018 PA257_1963 4f1a0e5a21505880b217f1ed8d58ca7c 285 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 271 2.5E-68 T 12-10-2018 PA257_1963 4f1a0e5a21505880b217f1ed8d58ca7c 285 SMART SM00062 28 257 0.0071 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 Gene3D G3DSA:1.10.510.10 88 274 3.8E-47 T 12-10-2018 PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 Gene3D G3DSA:3.40.50.410 613 809 1.2E-11 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 Pfam PF00092 von Willebrand factor type A domain 616 780 7.0E-6 T 12-10-2018 IPR002035 von Willebrand factor, type A PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 SUPERFAMILY SSF56112 6 339 2.02E-76 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 125 137 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 SMART SM00327 613 804 2.5E-9 T 12-10-2018 IPR002035 von Willebrand factor, type A PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 SMART SM00220 8 263 1.5E-65 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 SUPERFAMILY SSF53300 615 793 2.23E-12 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 14 37 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 Pfam PF00069 Protein kinase domain 9 250 2.1E-50 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PA257_0094 3399c10b8c90c5219bcb78c8047aef8d 1032 Gene3D G3DSA:3.30.200.20 2 87 4.7E-28 T 12-10-2018 PA257_6824 2bfddd13e6848f02e028b85ef5bd401e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6824 2bfddd13e6848f02e028b85ef5bd401e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6824 2bfddd13e6848f02e028b85ef5bd401e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6824 2bfddd13e6848f02e028b85ef5bd401e 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.9E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6824 2bfddd13e6848f02e028b85ef5bd401e 302 Gene3D G3DSA:3.40.190.10 181 264 2.6E-6 T 12-10-2018 PA257_6824 2bfddd13e6848f02e028b85ef5bd401e 302 SUPERFAMILY SSF46785 4 89 2.91E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6824 2bfddd13e6848f02e028b85ef5bd401e 302 Gene3D G3DSA:3.40.190.10 83 180 2.8E-6 T 12-10-2018 PA257_6824 2bfddd13e6848f02e028b85ef5bd401e 302 SUPERFAMILY SSF53850 89 294 1.1E-22 T 12-10-2018 PA257_6824 2bfddd13e6848f02e028b85ef5bd401e 302 Gene3D G3DSA:1.10.10.10 3 82 7.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6824 2bfddd13e6848f02e028b85ef5bd401e 302 Pfam PF03466 LysR substrate binding domain 90 292 4.2E-28 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00710 167 188 1.5 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00710 211 232 3900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00710 233 255 340.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00710 137 166 1000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00710 315 353 4000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00710 115 136 31.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00710 292 313 400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00710 189 210 1500.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00710 85 113 16.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 41 420 6.6E-141 T 12-10-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 Pfam PF05048 Periplasmic copper-binding protein (NosD) 144 383 9.4E-69 T 12-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 Gene3D G3DSA:2.160.20.10 218 353 1.2E-8 T 12-10-2018 IPR012334 Pectin lyase fold PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00722 38 187 4.1E-24 T 12-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SMART SM00722 193 367 1.6E-29 T 12-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 288 329 1.6E-5 T 12-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 Gene3D G3DSA:2.160.20.10 72 207 2.2E-16 T 12-10-2018 IPR012334 Pectin lyase fold PA257_1880 ccc3dabbbc2e2d8651b844f72aed14db 428 SUPERFAMILY SSF51126 37 407 5.94E-58 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor PA257_2073 6bf000c6ba7fae7501ce6a3d0119f60f 317 Pfam PF03466 LysR substrate binding domain 90 294 1.1E-36 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2073 6bf000c6ba7fae7501ce6a3d0119f60f 317 SUPERFAMILY SSF46785 4 85 6.81E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2073 6bf000c6ba7fae7501ce6a3d0119f60f 317 Gene3D G3DSA:1.10.10.10 3 87 6.4E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2073 6bf000c6ba7fae7501ce6a3d0119f60f 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2073 6bf000c6ba7fae7501ce6a3d0119f60f 317 Gene3D G3DSA:3.40.190.290 92 294 4.2E-56 T 12-10-2018 PA257_2073 6bf000c6ba7fae7501ce6a3d0119f60f 317 SUPERFAMILY SSF53850 90 297 2.71E-41 T 12-10-2018 PA257_1525 64a01b3ec39e7cb7e320e85ae41c6663 248 SUPERFAMILY SSF51219 6 235 3.4E-84 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily PA257_1525 64a01b3ec39e7cb7e320e85ae41c6663 248 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 6 224 9.9E-41 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 PA257_1525 64a01b3ec39e7cb7e320e85ae41c6663 248 Pfam PF01987 Mitochondrial biogenesis AIM24 8 222 1.3E-64 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 PA257_1525 64a01b3ec39e7cb7e320e85ae41c6663 248 Gene3D G3DSA:3.60.160.10 1 248 4.3E-115 T 12-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily PA257_2126 fbe29fc90b640ec1da75c1113ec2b314 311 Gene3D G3DSA:3.40.800.10 3 311 4.1E-114 T 12-10-2018 PA257_2126 fbe29fc90b640ec1da75c1113ec2b314 311 SUPERFAMILY SSF52768 9 310 3.42E-82 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily PA257_2126 fbe29fc90b640ec1da75c1113ec2b314 311 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 311 44.094 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 PA257_2126 fbe29fc90b640ec1da75c1113ec2b314 311 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 311 4.2E-129 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 PA257_2126 fbe29fc90b640ec1da75c1113ec2b314 311 PIRSF PIRSF036979 16 311 6.0E-28 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 PA257_2126 fbe29fc90b640ec1da75c1113ec2b314 311 Pfam PF00491 Arginase family 40 309 6.8E-62 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 PA257_5415 49ee5da0442878d9381d9b87d6ba8db3 258 SUPERFAMILY SSF69593 46 227 1.7E-25 T 12-10-2018 PA257_5415 49ee5da0442878d9381d9b87d6ba8db3 258 Pfam PF01553 Acyltransferase 61 181 6.5E-21 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_5415 49ee5da0442878d9381d9b87d6ba8db3 258 SMART SM00563 72 183 6.6E-29 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 Gene3D G3DSA:1.10.40.30 366 453 2.0E-33 T 12-10-2018 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 Pfam PF10397 Adenylosuccinate lyase C-terminus 368 445 8.8E-20 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 SUPERFAMILY SSF48557 9 449 2.67E-125 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 Pfam PF00206 Lyase 15 304 2.7E-67 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 SMART SM00998 367 446 5.4E-29 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 Gene3D G3DSA:1.20.200.10 109 364 4.0E-104 T 12-10-2018 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 Gene3D G3DSA:1.10.275.10 6 108 3.0E-36 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 9 352 1.7E-141 T 12-10-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 PRINTS PR00145 Argininosuccinate lyase family signature 234 258 3.7E-12 T 12-10-2018 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 3.7E-12 T 12-10-2018 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 3.7E-12 T 12-10-2018 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 3.7E-12 T 12-10-2018 PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 8.8E-25 T 12-10-2018 IPR000362 Fumarate lyase family PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 8.8E-25 T 12-10-2018 IPR000362 Fumarate lyase family PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 PRINTS PR00149 Fumarate lyase superfamily signature 234 261 8.8E-25 T 12-10-2018 IPR000362 Fumarate lyase family PA257_0257 75a8a2c479d61ba656d4b2831bafec35 459 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 8.8E-25 T 12-10-2018 IPR000362 Fumarate lyase family PA257_3979 7ea0df7ef646d169488b20d3ba77d18e 203 SUPERFAMILY SSF47240 2 199 4.06E-76 T 12-10-2018 IPR009078 Ferritin-like superfamily PA257_3979 7ea0df7ef646d169488b20d3ba77d18e 203 Gene3D G3DSA:1.20.1260.10 1 203 9.2E-86 T 12-10-2018 IPR012347 Ferritin-like PA257_3979 7ea0df7ef646d169488b20d3ba77d18e 203 PIRSF PIRSF020736 1 200 1.3E-90 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 PA257_3979 7ea0df7ef646d169488b20d3ba77d18e 203 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 1 51 8.5E-18 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 PA257_3979 7ea0df7ef646d169488b20d3ba77d18e 203 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 53 195 9.6E-70 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 PA257_1778 3ff9d1242dba712eaa3ef5fb8d02416a 194 PIRSF PIRSF006102 1 193 2.1E-60 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 PA257_1778 3ff9d1242dba712eaa3ef5fb8d02416a 194 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 191 4.1E-61 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 PA257_1778 3ff9d1242dba712eaa3ef5fb8d02416a 194 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 192 24.557 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 PA257_1778 3ff9d1242dba712eaa3ef5fb8d02416a 194 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 192 1.9E-82 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 Pfam PF00375 Sodium:dicarboxylate symporter family 11 403 6.0E-97 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 Gene3D G3DSA:1.10.3860.10 1 416 1.9E-109 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 SUPERFAMILY SSF118215 11 404 2.75E-106 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 430 36.4 T 12-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 3.9E-29 T 12-10-2018 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 3.9E-29 T 12-10-2018 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 3.9E-29 T 12-10-2018 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 3.9E-29 T 12-10-2018 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 3.9E-29 T 12-10-2018 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 3.9E-29 T 12-10-2018 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 PRINTS PR00173 Glutamate-aspartate symporter signature 45 65 3.9E-29 T 12-10-2018 PA257_0142 e71ead8d7ea95690b79a82c40238bc65 444 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site PA257_4440 e0a745f8b51610431967884170b6604a 403 Pfam PF07690 Major Facilitator Superfamily 22 320 1.5E-22 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4440 e0a745f8b51610431967884170b6604a 403 Gene3D G3DSA:1.20.1250.20 9 389 2.0E-33 T 12-10-2018 PA257_4440 e0a745f8b51610431967884170b6604a 403 SUPERFAMILY SSF103473 9 389 7.32E-41 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_2282 a474a499a58ebe0b0594977163bd4ade 642 Gene3D G3DSA:1.10.530.10 472 637 2.6E-47 T 12-10-2018 PA257_2282 a474a499a58ebe0b0594977163bd4ade 642 Pfam PF01464 Transglycosylase SLT domain 485 596 9.3E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 PA257_2282 a474a499a58ebe0b0594977163bd4ade 642 Gene3D G3DSA:1.25.20.10 25 384 1.3E-102 T 12-10-2018 PA257_2282 a474a499a58ebe0b0594977163bd4ade 642 Pfam PF14718 Soluble lytic murein transglycosylase L domain 404 470 6.1E-17 T 12-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PA257_2282 a474a499a58ebe0b0594977163bd4ade 642 SUPERFAMILY SSF53955 478 636 2.97E-45 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_2282 a474a499a58ebe0b0594977163bd4ade 642 SUPERFAMILY SSF48435 26 475 2.75E-129 T 12-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 188 412 3.0E-46 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 SUPERFAMILY SSF55961 168 416 3.38E-53 T 12-10-2018 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 40 65 2.0E-27 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 2.0E-27 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 91 111 2.0E-27 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 2.0E-27 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 112 132 2.0E-27 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 70 85 2.0E-27 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 SUPERFAMILY SSF50022 24 167 3.67E-44 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 Pfam PF00355 Rieske [2Fe-2S] domain 56 131 1.7E-16 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 Gene3D G3DSA:3.90.380.10 28 409 1.3E-155 T 12-10-2018 PA257_6805 1ffc0013a9a7281be8833b1afcfd0a81 429 Gene3D G3DSA:2.102.10.10 53 172 1.3E-155 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 Gene3D G3DSA:1.10.490.80 606 704 1.1E-32 T 12-10-2018 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 Gene3D G3DSA:1.10.8.540 516 604 4.0E-32 T 12-10-2018 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 Pfam PF00771 FHIPEP family 26 696 1.5E-238 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 3.8E-58 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 3.8E-58 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 3.8E-58 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 3.8E-58 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 3.8E-58 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 3.8E-58 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 Gene3D G3DSA:3.40.30.60 370 515 3.0E-35 T 12-10-2018 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 704 4.7E-298 T 12-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 12-10-2018 IPR025505 FHIPEP conserved site PA257_4071 105ddee45d06fbc689ce70577ef7a43b 706 PIRSF PIRSF005419 3 706 7.4E-262 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 Gene3D G3DSA:3.40.50.1980 36 238 1.7E-129 T 12-10-2018 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 236 268 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 PIRSF PIRSF000099 8 436 7.4E-159 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 Pfam PF00815 Histidinol dehydrogenase 30 433 1.1E-168 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 368 386 2.7E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 207 232 2.7E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 327 352 2.7E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 143 169 2.7E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 258 277 2.7E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 177 203 2.7E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 2.7E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 236 257 2.7E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 434 40.731 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 433 1.0E-160 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 Gene3D G3DSA:3.40.50.1980 240 356 1.7E-129 T 12-10-2018 PA257_5515 3913815ea0d82374a1dbb220ad719f22 440 SUPERFAMILY SSF53720 33 434 2.35E-86 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_4497 9c61010c2bbea75a79cd6369d031fbdd 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 169 3.9E-27 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_4497 9c61010c2bbea75a79cd6369d031fbdd 175 SUPERFAMILY SSF88659 95 170 9.81E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_4497 9c61010c2bbea75a79cd6369d031fbdd 175 SUPERFAMILY SSF88946 10 89 3.37E-15 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_4497 9c61010c2bbea75a79cd6369d031fbdd 175 Pfam PF08281 Sigma-70, region 4 115 165 5.0E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_4497 9c61010c2bbea75a79cd6369d031fbdd 175 Gene3D G3DSA:1.10.1740.10 2 74 2.6E-11 T 12-10-2018 PA257_4497 9c61010c2bbea75a79cd6369d031fbdd 175 Gene3D G3DSA:1.10.10.10 88 173 2.4E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4497 9c61010c2bbea75a79cd6369d031fbdd 175 Pfam PF04542 Sigma-70 region 2 13 78 6.9E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_6193 4d9d8fec38259cab6d25001179998632 312 SUPERFAMILY SSF53850 94 299 3.08E-41 T 12-10-2018 PA257_6193 4d9d8fec38259cab6d25001179998632 312 Pfam PF03466 LysR substrate binding domain 94 295 2.9E-40 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6193 4d9d8fec38259cab6d25001179998632 312 SUPERFAMILY SSF46785 4 117 5.75E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6193 4d9d8fec38259cab6d25001179998632 312 Gene3D G3DSA:3.40.190.10 106 291 9.3E-52 T 12-10-2018 PA257_6193 4d9d8fec38259cab6d25001179998632 312 Gene3D G3DSA:1.10.10.10 8 89 3.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6193 4d9d8fec38259cab6d25001179998632 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.8E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6193 4d9d8fec38259cab6d25001179998632 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6193 4d9d8fec38259cab6d25001179998632 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6193 4d9d8fec38259cab6d25001179998632 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6193 4d9d8fec38259cab6d25001179998632 312 Gene3D G3DSA:3.40.190.10 166 264 9.3E-52 T 12-10-2018 PA257_6085 04608cc2a8672a5db36cdb9af88c1312 196 Pfam PF00384 Molybdopterin oxidoreductase 108 140 7.6E-7 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_6085 04608cc2a8672a5db36cdb9af88c1312 196 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 46 104 9.9E-19 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_6085 04608cc2a8672a5db36cdb9af88c1312 196 SMART SM00926 44 105 3.2E-22 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_6085 04608cc2a8672a5db36cdb9af88c1312 196 SUPERFAMILY SSF53706 37 196 3.4E-54 T 12-10-2018 PA257_6085 04608cc2a8672a5db36cdb9af88c1312 196 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 49 67 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 PA257_6085 04608cc2a8672a5db36cdb9af88c1312 196 Gene3D G3DSA:3.40.50.740 108 196 1.3E-32 T 12-10-2018 PA257_6085 04608cc2a8672a5db36cdb9af88c1312 196 Gene3D G3DSA:2.20.25.90 45 105 1.8E-17 T 12-10-2018 PA257_5403 0c673c777b895a1638ffbdf2dadf7f4b 385 Gene3D G3DSA:3.30.870.10 7 187 6.2E-34 T 12-10-2018 PA257_5403 0c673c777b895a1638ffbdf2dadf7f4b 385 SMART SM00155 109 136 0.39 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_5403 0c673c777b895a1638ffbdf2dadf7f4b 385 SMART SM00155 291 317 1.4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_5403 0c673c777b895a1638ffbdf2dadf7f4b 385 SUPERFAMILY SSF56024 4 177 3.36E-41 T 12-10-2018 PA257_5403 0c673c777b895a1638ffbdf2dadf7f4b 385 Gene3D G3DSA:3.30.870.10 199 348 2.8E-24 T 12-10-2018 PA257_5403 0c673c777b895a1638ffbdf2dadf7f4b 385 SUPERFAMILY SSF56024 207 364 3.36E-38 T 12-10-2018 PA257_5403 0c673c777b895a1638ffbdf2dadf7f4b 385 Pfam PF13091 PLD-like domain 217 339 1.8E-25 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PA257_5403 0c673c777b895a1638ffbdf2dadf7f4b 385 Pfam PF13091 PLD-like domain 30 169 3.4E-11 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PA257_2960 f285e0aec51e6491504e6609fc67c1d9 383 SUPERFAMILY SSF47203 246 381 9.02E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_2960 f285e0aec51e6491504e6609fc67c1d9 383 PIRSF PIRSF016578 3 383 3.1E-29 T 12-10-2018 PA257_2960 f285e0aec51e6491504e6609fc67c1d9 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 86 2.3E-4 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_2960 f285e0aec51e6491504e6609fc67c1d9 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 216 2.9E-9 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_2960 f285e0aec51e6491504e6609fc67c1d9 383 Gene3D G3DSA:1.10.540.10 8 115 1.5E-19 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_2960 f285e0aec51e6491504e6609fc67c1d9 383 SUPERFAMILY SSF56645 18 225 5.89E-42 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_2960 f285e0aec51e6491504e6609fc67c1d9 383 Gene3D G3DSA:1.20.140.10 231 383 2.2E-21 T 12-10-2018 PA257_2960 f285e0aec51e6491504e6609fc67c1d9 383 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 257 366 1.5E-8 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PA257_2960 f285e0aec51e6491504e6609fc67c1d9 383 Gene3D G3DSA:2.40.110.10 138 230 2.0E-22 T 12-10-2018 PA257_5625 92ba0e2fee3c4b169c7ae98a804595f6 448 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 8 439 3.2E-151 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 PA257_5625 92ba0e2fee3c4b169c7ae98a804595f6 448 Gene3D G3DSA:3.40.50.300 159 440 8.3E-94 T 12-10-2018 PA257_5625 92ba0e2fee3c4b169c7ae98a804595f6 448 SUPERFAMILY SSF52540 178 429 1.97E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5625 92ba0e2fee3c4b169c7ae98a804595f6 448 Pfam PF03796 DnaB-like helicase C terminal domain 180 437 8.1E-97 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 PA257_5625 92ba0e2fee3c4b169c7ae98a804595f6 448 Pfam PF00772 DnaB-like helicase N terminal domain 8 106 5.2E-31 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PA257_5625 92ba0e2fee3c4b169c7ae98a804595f6 448 SUPERFAMILY SSF48024 8 114 1.44E-33 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 PA257_5625 92ba0e2fee3c4b169c7ae98a804595f6 448 Gene3D G3DSA:1.10.860.10 3 158 1.5E-47 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PA257_6307 ed940021801deaa2d02354e4b7b43534 899 Pfam PF13426 PAS domain 358 459 7.6E-15 T 12-10-2018 IPR000014 PAS domain PA257_6307 ed940021801deaa2d02354e4b7b43534 899 SMART SM00052 639 885 2.7E-123 T 12-10-2018 IPR001633 EAL domain PA257_6307 ed940021801deaa2d02354e4b7b43534 899 SUPERFAMILY SSF55785 352 458 3.22E-22 T 12-10-2018 IPR035965 PAS domain superfamily PA257_6307 ed940021801deaa2d02354e4b7b43534 899 SMART SM00091 346 412 3.8E-6 T 12-10-2018 IPR000014 PAS domain PA257_6307 ed940021801deaa2d02354e4b7b43534 899 SMART SM00091 24 87 59.0 T 12-10-2018 IPR000014 PAS domain PA257_6307 ed940021801deaa2d02354e4b7b43534 899 SUPERFAMILY SSF55781 195 335 3.05E-19 T 12-10-2018 PA257_6307 ed940021801deaa2d02354e4b7b43534 899 Gene3D G3DSA:3.30.450.40 166 342 1.9E-19 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_6307 ed940021801deaa2d02354e4b7b43534 899 Pfam PF01590 GAF domain 193 332 7.5E-13 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_6307 ed940021801deaa2d02354e4b7b43534 899 Gene3D G3DSA:3.30.450.20 344 469 2.2E-28 T 12-10-2018 PA257_6307 ed940021801deaa2d02354e4b7b43534 899 Pfam PF00563 EAL domain 645 880 2.1E-78 T 12-10-2018 IPR001633 EAL domain PA257_6307 ed940021801deaa2d02354e4b7b43534 899 Gene3D G3DSA:3.30.70.270 470 641 3.0E-51 T 12-10-2018 PA257_6307 ed940021801deaa2d02354e4b7b43534 899 SMART SM00065 192 343 5.2E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_6307 ed940021801deaa2d02354e4b7b43534 899 SMART SM00086 418 460 8.1E-7 T 12-10-2018 IPR001610 PAC motif PA257_6307 ed940021801deaa2d02354e4b7b43534 899 Gene3D G3DSA:3.20.20.450 642 891 5.5E-105 T 12-10-2018 IPR035919 EAL domain superfamily PA257_6307 ed940021801deaa2d02354e4b7b43534 899 SUPERFAMILY SSF55073 476 630 1.1E-43 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_6307 ed940021801deaa2d02354e4b7b43534 899 SMART SM00267 460 629 1.7E-56 T 12-10-2018 IPR000160 GGDEF domain PA257_6307 ed940021801deaa2d02354e4b7b43534 899 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 346 466 1.1E-17 T 12-10-2018 IPR000014 PAS domain PA257_6307 ed940021801deaa2d02354e4b7b43534 899 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 467 628 2.2E-35 T 12-10-2018 IPR000160 GGDEF domain PA257_6307 ed940021801deaa2d02354e4b7b43534 899 SUPERFAMILY SSF141868 644 892 8.11E-92 T 12-10-2018 IPR035919 EAL domain superfamily PA257_6307 ed940021801deaa2d02354e4b7b43534 899 Pfam PF00990 Diguanylate cyclase, GGDEF domain 471 624 1.6E-39 T 12-10-2018 IPR000160 GGDEF domain PA257_3387 76e2a4c84e8e8772d3f7b22902db8adf 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 4.7E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3387 76e2a4c84e8e8772d3f7b22902db8adf 312 Pfam PF03466 LysR substrate binding domain 97 301 3.2E-50 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3387 76e2a4c84e8e8772d3f7b22902db8adf 312 SUPERFAMILY SSF53850 98 305 1.09E-47 T 12-10-2018 PA257_3387 76e2a4c84e8e8772d3f7b22902db8adf 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3387 76e2a4c84e8e8772d3f7b22902db8adf 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3387 76e2a4c84e8e8772d3f7b22902db8adf 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3387 76e2a4c84e8e8772d3f7b22902db8adf 312 Gene3D G3DSA:1.10.10.10 10 94 2.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3387 76e2a4c84e8e8772d3f7b22902db8adf 312 SUPERFAMILY SSF46785 11 97 4.96E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3387 76e2a4c84e8e8772d3f7b22902db8adf 312 Gene3D G3DSA:3.40.190.290 100 300 4.3E-60 T 12-10-2018 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 Pfam PF00551 Formyl transferase 91 266 6.3E-36 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 113 140 1.6E-43 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 91 113 1.6E-43 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.6E-43 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 1.6E-43 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 237 259 1.6E-43 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 259 284 1.6E-43 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 Gene3D G3DSA:3.40.50.170 90 285 2.4E-76 T 12-10-2018 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 SUPERFAMILY SSF53328 92 284 3.53E-59 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 PIRSF PIRSF036480 5 285 8.2E-97 T 12-10-2018 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 285 42.906 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_6815 b89286601533ceb56e4daa65caa484ea 285 Gene3D G3DSA:3.30.70.260 1 89 5.8E-17 T 12-10-2018 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 Gene3D G3DSA:3.30.470.20 101 309 1.8E-71 T 12-10-2018 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 Gene3D G3DSA:3.40.50.20 8 100 8.2E-30 T 12-10-2018 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 Pfam PF07478 D-ala D-ala ligase C-terminus 120 311 2.4E-56 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 79 90 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 20 313 4.8E-110 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 PIRSF PIRSF039102 59 318 1.4E-82 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 PIRSF PIRSF039102 17 65 9.3E-8 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 Pfam PF01820 D-ala D-ala ligase N-terminus 20 102 3.1E-18 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 SUPERFAMILY SSF56059 113 312 5.48E-59 T 12-10-2018 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 Gene3D G3DSA:3.30.1490.20 127 192 1.8E-71 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 257 285 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 19 315 35.054 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5477 87a7f4bab32128f75d0cb30f439bda41 319 SUPERFAMILY SSF52440 20 112 5.08E-30 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_4482 35fb308a928e792be20878aa20b3a8b1 128 Gene3D G3DSA:3.10.450.50 1 128 8.3E-49 T 12-10-2018 PA257_4482 35fb308a928e792be20878aa20b3a8b1 128 Pfam PF14534 Domain of unknown function (DUF4440) 26 114 1.4E-6 T 12-10-2018 IPR027843 Domain of unknown function DUF4440 PA257_4482 35fb308a928e792be20878aa20b3a8b1 128 SUPERFAMILY SSF54427 4 127 9.25E-45 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_4482 35fb308a928e792be20878aa20b3a8b1 128 PIRSF PIRSF029394 1 128 1.1E-51 T 12-10-2018 IPR016918 Uncharacterised conserved protein UCP029394 PA257_3374 61c3038443b726e186fc214de3060410 196 SUPERFAMILY SSF46689 3 86 5.99E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3374 61c3038443b726e186fc214de3060410 196 Gene3D G3DSA:1.10.357.10 1 196 6.1E-56 T 12-10-2018 PA257_3374 61c3038443b726e186fc214de3060410 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 4.2E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3374 61c3038443b726e186fc214de3060410 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.0E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3374 61c3038443b726e186fc214de3060410 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.0E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3374 61c3038443b726e186fc214de3060410 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_1793 55e303d8a190492b44af291bf6405af2 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 258 3.9E-40 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1793 55e303d8a190492b44af291bf6405af2 268 SMART SM00062 38 261 2.0E-56 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1793 55e303d8a190492b44af291bf6405af2 268 Gene3D G3DSA:3.40.190.10 125 216 1.4E-92 T 12-10-2018 PA257_1793 55e303d8a190492b44af291bf6405af2 268 Gene3D G3DSA:3.40.190.10 30 248 1.4E-92 T 12-10-2018 PA257_1793 55e303d8a190492b44af291bf6405af2 268 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site PA257_1793 55e303d8a190492b44af291bf6405af2 268 SUPERFAMILY SSF53850 11 259 1.34E-52 T 12-10-2018 PA257_4713 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 140 158 2.2E-41 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PA257_4713 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 172 186 2.2E-41 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PA257_4713 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 215 233 2.2E-41 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PA257_4713 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 285 303 2.2E-41 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PA257_4713 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 392 416 2.2E-41 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PA257_4713 326ed212556609999d03b468de9dcfa6 598 Pfam PF08345 Flagellar M-ring protein C-terminal 272 469 3.0E-49 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal PA257_4713 326ed212556609999d03b468de9dcfa6 598 Pfam PF01514 Secretory protein of YscJ/FliF family 48 239 7.7E-71 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF PA257_4713 326ed212556609999d03b468de9dcfa6 598 Gene3D G3DSA:3.30.300.30 139 243 2.2E-11 T 12-10-2018 PA257_4713 326ed212556609999d03b468de9dcfa6 598 PIRSF PIRSF004862 27 598 6.9E-140 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PA257_4713 326ed212556609999d03b468de9dcfa6 598 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 34 513 3.2E-93 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PA257_4877 d40667151868dd96623c0c5c1d834ac0 69 Hamap MF_00715 Protein SlyX [slyX]. 2 69 17.239 T 12-10-2018 IPR007236 SlyX PA257_4877 d40667151868dd96623c0c5c1d834ac0 69 Pfam PF04102 SlyX 3 69 4.3E-24 T 12-10-2018 IPR007236 SlyX PA257_1754 4753120b7a07a97bcafd8db12c3c6536 200 SUPERFAMILY SSF52833 3 194 1.25E-66 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_1754 4753120b7a07a97bcafd8db12c3c6536 200 Gene3D G3DSA:3.40.30.10 1 197 8.7E-74 T 12-10-2018 PA257_1754 4753120b7a07a97bcafd8db12c3c6536 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 2.9E-14 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_1754 4753120b7a07a97bcafd8db12c3c6536 200 Pfam PF00578 AhpC/TSA family 5 139 4.0E-33 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_1754 4753120b7a07a97bcafd8db12c3c6536 200 PIRSF PIRSF000239 1 199 3.0E-59 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_0030 7dea285e5ff31f7d9251c026d179f731 362 SUPERFAMILY SSF102405 85 293 3.97E-45 T 12-10-2018 PA257_0030 7dea285e5ff31f7d9251c026d179f731 362 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 291 8.2E-75 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 PA257_0030 7dea285e5ff31f7d9251c026d179f731 362 Gene3D G3DSA:3.40.50.450 1 294 4.5E-102 T 12-10-2018 PA257_0030 7dea285e5ff31f7d9251c026d179f731 362 Pfam PF02481 DNA recombination-mediator protein A 82 283 4.5E-75 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 PA257_5526 fcfc50525ac5c4657a56c1d6898b80f5 179 PIRSF PIRSF006118 4 179 2.1E-68 T 12-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PA257_5526 fcfc50525ac5c4657a56c1d6898b80f5 179 SUPERFAMILY SSF56784 13 172 3.15E-42 T 12-10-2018 IPR036412 HAD-like superfamily PA257_5526 fcfc50525ac5c4657a56c1d6898b80f5 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 17 169 1.6E-49 T 12-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PA257_5526 fcfc50525ac5c4657a56c1d6898b80f5 179 Gene3D G3DSA:3.40.50.1000 2 179 5.9E-54 T 12-10-2018 IPR023214 HAD superfamily PA257_5526 fcfc50525ac5c4657a56c1d6898b80f5 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 153 1.6E-6 T 12-10-2018 PA257_6848 ed664575ad843d2bcfb423aeb7574678 460 Pfam PF00534 Glycosyl transferases group 1 268 415 1.3E-21 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_6848 ed664575ad843d2bcfb423aeb7574678 460 SUPERFAMILY SSF53756 14 411 3.41E-41 T 12-10-2018 PA257_6848 ed664575ad843d2bcfb423aeb7574678 460 Gene3D G3DSA:3.40.50.2000 259 416 7.5E-27 T 12-10-2018 PA257_4861 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 208 2.4E-62 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PA257_4861 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 SUPERFAMILY SSF52402 4 223 3.97E-64 T 12-10-2018 PA257_4861 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 221 56.246 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PA257_4861 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 PIRSF PIRSF006293 2 224 3.8E-79 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PA257_4861 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 Pfam PF06508 Queuosine biosynthesis protein QueC 5 215 5.9E-80 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PA257_4861 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 Gene3D G3DSA:3.40.50.620 2 220 3.2E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2428 92fc601759b346cb885956195525527a 433 SUPERFAMILY SSF47384 161 196 2.16E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2428 92fc601759b346cb885956195525527a 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 4.5E-22 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2428 92fc601759b346cb885956195525527a 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 4.5E-22 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2428 92fc601759b346cb885956195525527a 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 4.5E-22 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2428 92fc601759b346cb885956195525527a 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 4.5E-22 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2428 92fc601759b346cb885956195525527a 433 SMART SM00387 317 425 4.5E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2428 92fc601759b346cb885956195525527a 433 Pfam PF00571 CBS domain 76 134 2.3E-6 T 12-10-2018 IPR000644 CBS domain PA257_2428 92fc601759b346cb885956195525527a 433 Pfam PF00571 CBS domain 11 57 1.1E-5 T 12-10-2018 IPR000644 CBS domain PA257_2428 92fc601759b346cb885956195525527a 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 424 4.9E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2428 92fc601759b346cb885956195525527a 433 Gene3D G3DSA:3.30.565.10 278 432 1.0E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2428 92fc601759b346cb885956195525527a 433 SUPERFAMILY SSF55874 268 424 8.51E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2428 92fc601759b346cb885956195525527a 433 Gene3D G3DSA:3.10.580.10 8 136 7.5E-14 T 12-10-2018 PA257_2428 92fc601759b346cb885956195525527a 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 167 275 4.7E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2428 92fc601759b346cb885956195525527a 433 SUPERFAMILY SSF54631 11 136 2.85E-13 T 12-10-2018 PA257_4997 e0ab4b09eb55b31d866093c3c22e56fc 389 SUPERFAMILY SSF81296 26 210 1.01E-54 T 12-10-2018 IPR014756 Immunoglobulin E-set PA257_4997 e0ab4b09eb55b31d866093c3c22e56fc 389 Gene3D G3DSA:2.70.50.50 26 212 3.0E-65 T 12-10-2018 PA257_4997 e0ab4b09eb55b31d866093c3c22e56fc 389 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 207 2.2E-45 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal PA257_4997 e0ab4b09eb55b31d866093c3c22e56fc 389 Gene3D G3DSA:3.30.70.2150 215 320 1.1E-16 T 12-10-2018 PA257_0884 877d7450b24ff61c5aa40704a412f33e 162 Pfam PF03284 Phenazine biosynthesis protein A/B 10 162 1.3E-89 T 12-10-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PA257_0884 877d7450b24ff61c5aa40704a412f33e 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 14 162 3.0E-85 T 12-10-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PA257_0884 877d7450b24ff61c5aa40704a412f33e 162 SUPERFAMILY SSF54427 19 148 1.43E-24 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_0884 877d7450b24ff61c5aa40704a412f33e 162 Gene3D G3DSA:3.10.450.50 12 152 8.4E-48 T 12-10-2018 PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 SMART SM00116 262 310 1.6E-5 T 12-10-2018 IPR000644 CBS domain PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 SMART SM00116 321 367 3.2 T 12-10-2018 IPR000644 CBS domain PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 Pfam PF00571 CBS domain 260 307 1.4E-8 T 12-10-2018 IPR000644 CBS domain PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 Pfam PF00571 CBS domain 321 367 0.0073 T 12-10-2018 IPR000644 CBS domain PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 Gene3D G3DSA:3.40.50.300 1 256 5.1E-70 T 12-10-2018 PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 SUPERFAMILY SSF54631 253 367 6.13E-20 T 12-10-2018 PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 20 367 1.8E-104 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 Pfam PF00005 ABC transporter 23 168 5.3E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 SMART SM00382 31 226 2.5E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 Gene3D G3DSA:3.10.580.10 257 368 4.0E-16 T 12-10-2018 PA257_1273 c1a30b3a73d976023f80d7c5d51f0f91 387 SUPERFAMILY SSF52540 1 245 2.26E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1169 58f0a5558dacd35b0f635011e648773b 279 SMART SM00116 72 121 13.0 T 12-10-2018 IPR000644 CBS domain PA257_1169 58f0a5558dacd35b0f635011e648773b 279 SMART SM00116 136 184 0.64 T 12-10-2018 IPR000644 CBS domain PA257_1169 58f0a5558dacd35b0f635011e648773b 279 Pfam PF03471 Transporter associated domain 202 277 1.1E-20 T 12-10-2018 IPR005170 Transporter-associated domain PA257_1169 58f0a5558dacd35b0f635011e648773b 279 SUPERFAMILY SSF54631 60 198 1.64E-31 T 12-10-2018 PA257_1169 58f0a5558dacd35b0f635011e648773b 279 SMART SM01091 200 278 6.8E-30 T 12-10-2018 IPR005170 Transporter-associated domain PA257_1169 58f0a5558dacd35b0f635011e648773b 279 Gene3D G3DSA:3.30.465.10 197 279 2.3E-33 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_1169 58f0a5558dacd35b0f635011e648773b 279 Pfam PF00571 CBS domain 136 184 4.1E-5 T 12-10-2018 IPR000644 CBS domain PA257_1169 58f0a5558dacd35b0f635011e648773b 279 Pfam PF00571 CBS domain 63 120 0.0059 T 12-10-2018 IPR000644 CBS domain PA257_1169 58f0a5558dacd35b0f635011e648773b 279 Gene3D G3DSA:3.10.580.10 43 195 6.2E-52 T 12-10-2018 PA257_1169 58f0a5558dacd35b0f635011e648773b 279 SUPERFAMILY SSF56176 198 278 3.82E-22 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_2049 5110fab0a961a6a334af3fc841055477 285 SUPERFAMILY SSF51182 7 281 1.85E-85 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_2049 5110fab0a961a6a334af3fc841055477 285 PIRSF PIRSF006232 3 285 2.3E-97 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 PA257_2049 5110fab0a961a6a334af3fc841055477 285 Gene3D G3DSA:2.60.120.10 18 279 1.1E-95 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_2049 5110fab0a961a6a334af3fc841055477 285 Pfam PF02678 Pirin 22 122 1.2E-37 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 PA257_2049 5110fab0a961a6a334af3fc841055477 285 Pfam PF05726 Pirin C-terminal cupin domain 181 282 9.6E-33 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 PA257_2049 5110fab0a961a6a334af3fc841055477 285 Gene3D G3DSA:2.60.120.10 144 253 1.1E-95 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1395 54acaee59c44177edc6726f756193259 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.1E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1395 54acaee59c44177edc6726f756193259 302 Gene3D G3DSA:1.10.10.10 1 85 2.3E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1395 54acaee59c44177edc6726f756193259 302 SUPERFAMILY SSF53850 91 299 5.04E-30 T 12-10-2018 PA257_1395 54acaee59c44177edc6726f756193259 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1395 54acaee59c44177edc6726f756193259 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1395 54acaee59c44177edc6726f756193259 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1395 54acaee59c44177edc6726f756193259 302 Gene3D G3DSA:3.40.190.10 94 290 8.6E-50 T 12-10-2018 PA257_1395 54acaee59c44177edc6726f756193259 302 Pfam PF03466 LysR substrate binding domain 88 296 5.1E-35 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1395 54acaee59c44177edc6726f756193259 302 SUPERFAMILY SSF46785 3 87 1.85E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1395 54acaee59c44177edc6726f756193259 302 Gene3D G3DSA:3.40.190.10 167 272 8.6E-50 T 12-10-2018 PA257_3216 10ca2c6086bd9f8cb4f82d3a755a9f61 324 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 19 294 9.7E-63 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 PA257_3216 10ca2c6086bd9f8cb4f82d3a755a9f61 324 Gene3D G3DSA:3.100.10.20 1 99 2.3E-50 T 12-10-2018 PA257_3216 10ca2c6086bd9f8cb4f82d3a755a9f61 324 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 12 318 1.9E-154 T 12-10-2018 IPR019857 CRISPR-associated protein Cas1, YPEST subtype GO:0004520|GO:0043571|GO:0046872 PA257_3216 10ca2c6086bd9f8cb4f82d3a755a9f61 324 Pfam PF01867 CRISPR associated protein Cas1 37 272 6.8E-12 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 PA257_3216 10ca2c6086bd9f8cb4f82d3a755a9f61 324 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 16 318 15.778 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 PA257_3216 10ca2c6086bd9f8cb4f82d3a755a9f61 324 Gene3D G3DSA:1.20.120.920 114 323 1.9E-65 T 12-10-2018 PA257_6423 50f19f1d45ff6f34da6e2ba3ca9318b7 139 SMART SM00450 40 136 5.7E-14 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_6423 50f19f1d45ff6f34da6e2ba3ca9318b7 139 Pfam PF00581 Rhodanese-like domain 43 131 4.8E-11 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_6423 50f19f1d45ff6f34da6e2ba3ca9318b7 139 Gene3D G3DSA:3.40.250.10 42 139 5.6E-22 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_6423 50f19f1d45ff6f34da6e2ba3ca9318b7 139 SUPERFAMILY SSF52821 16 139 3.27E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_1057 b07eac8379ab74f3ba9e07ad222a75c0 96 PIRSF PIRSF028291 1 96 4.0E-43 T 12-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 PA257_1057 b07eac8379ab74f3ba9e07ad222a75c0 96 Gene3D G3DSA:3.30.310.50 1 96 6.6E-37 T 12-10-2018 PA257_1057 b07eac8379ab74f3ba9e07ad222a75c0 96 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 92 1.5E-29 T 12-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 PA257_4238 5e01679976edb6f08f2c71d3fe486847 179 Pfam PF05751 FixH 12 155 1.3E-39 T 12-10-2018 IPR008620 Nitrogen fixation protein FixH PA257_4284 63a9a10c30ae3f4ff06d2bced0da08ed 86 Pfam PF05488 PAAR motif 7 76 3.2E-21 T 12-10-2018 IPR008727 PAAR motif PA257_4284 63a9a10c30ae3f4ff06d2bced0da08ed 86 Gene3D G3DSA:2.60.200.60 18 82 1.4E-7 T 12-10-2018 PA257_4438 fd330fc23689aa249103a2bc6bbdb695 137 SUPERFAMILY SSF54593 1 134 2.6E-38 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4438 fd330fc23689aa249103a2bc6bbdb695 137 Gene3D G3DSA:3.10.180.10 7 137 1.0E-58 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4438 fd330fc23689aa249103a2bc6bbdb695 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 131 1.7E-10 T 12-10-2018 IPR028973 PhnB-like PA257_2387 950baf683f98e561d81bfb15f09c31f2 261 Gene3D G3DSA:3.40.190.10 113 213 2.6E-73 T 12-10-2018 PA257_2387 950baf683f98e561d81bfb15f09c31f2 261 Gene3D G3DSA:3.40.190.10 29 252 2.6E-73 T 12-10-2018 PA257_2387 950baf683f98e561d81bfb15f09c31f2 261 SMART SM00062 27 256 2.0E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2387 950baf683f98e561d81bfb15f09c31f2 261 SUPERFAMILY SSF53850 26 258 2.46E-60 T 12-10-2018 PA257_2387 950baf683f98e561d81bfb15f09c31f2 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 2.0E-57 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 SMART SM00388 392 460 1.7E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 SMART SM00387 499 609 2.5E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 Gene3D G3DSA:3.30.450.20 45 288 4.7E-62 T 12-10-2018 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 Gene3D G3DSA:1.10.287.130 368 455 8.2E-18 T 12-10-2018 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 607 6.0E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 Gene3D G3DSA:3.30.450.20 58 178 4.7E-62 T 12-10-2018 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 SUPERFAMILY SSF47384 381 458 7.46E-9 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 552 5.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 566 5.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 587 5.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 606 5.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 Pfam PF02743 Cache domain 38 223 9.9E-20 T 12-10-2018 IPR033479 Double Cache domain 1 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 SUPERFAMILY SSF55874 463 609 4.85E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 Pfam PF00512 His Kinase A (phospho-acceptor) domain 394 457 4.6E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 SUPERFAMILY SSF103190 65 189 1.61E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 PIRSF PIRSF036431 1 616 1.4E-205 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PA257_4457 a104df236ffe7ffe2c4bd2d4948e48bd 618 Gene3D G3DSA:3.30.565.10 459 610 4.5E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5835 86ce178ad138336c685cefd1b93de76f 171 Pfam PF05229 Spore Coat Protein U domain 24 168 3.0E-35 T 12-10-2018 IPR007893 Spore coat protein U PA257_5835 86ce178ad138336c685cefd1b93de76f 171 SMART SM00972 113 168 1.4E-20 T 12-10-2018 IPR007893 Spore coat protein U PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 Pfam PF01145 SPFH domain / Band 7 family 25 200 1.7E-29 T 12-10-2018 IPR001107 Band 7 domain PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 PIRSF PIRSF005651 1 289 6.5E-94 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 161 179 5.7E-8 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 28 50 5.7E-8 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 180 201 5.7E-8 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 115 132 5.7E-8 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 Gene3D G3DSA:3.30.479.30 50 187 2.5E-25 T 12-10-2018 PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 SMART SM00244 21 185 4.4E-38 T 12-10-2018 IPR001107 Band 7 domain PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 TIGRFAM TIGR01932 hflC: HflC protein 154 285 1.4E-45 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 TIGRFAM TIGR01932 hflC: HflC protein 7 157 6.8E-40 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 PA257_6224 d6764fabb7c470a2657fca56f37e95a0 289 SUPERFAMILY SSF117892 53 192 7.45E-28 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 Gene3D G3DSA:1.10.8.60 302 376 1.1E-21 T 12-10-2018 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 SMART SM00382 150 293 7.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 Pfam PF00158 Sigma-54 interaction domain 135 296 3.6E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 462 7.0E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 7.0E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 154 167 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 Gene3D G3DSA:3.40.50.2300 1 125 6.1E-35 T 12-10-2018 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 SUPERFAMILY SSF46689 343 458 1.34E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 Gene3D G3DSA:3.40.50.300 126 301 1.4E-62 T 12-10-2018 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 SUPERFAMILY SSF52540 132 371 1.62E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 343 352 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 Pfam PF00072 Response regulator receiver domain 5 114 2.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 Gene3D G3DSA:1.10.10.60 404 462 3.4E-10 T 12-10-2018 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 Pfam PF02954 Bacterial regulatory protein, Fis family 419 458 1.5E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 SUPERFAMILY SSF52172 4 174 2.85E-41 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4715 0a64fbfeb1cb94d592a070fd1e9f278d 473 SMART SM00448 3 114 1.3E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6871 684eff76cca7d2bb8a34766ac0515464 379 Pfam PF01139 tRNA-splicing ligase RtcB 29 98 1.1E-8 T 12-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PA257_6871 684eff76cca7d2bb8a34766ac0515464 379 SUPERFAMILY SSF103365 8 372 1.1E-103 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PA257_6871 684eff76cca7d2bb8a34766ac0515464 379 Pfam PF01139 tRNA-splicing ligase RtcB 125 372 3.7E-57 T 12-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PA257_6871 684eff76cca7d2bb8a34766ac0515464 379 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 12 367 4.4E-189 T 12-10-2018 IPR017510 Release factor H-coupled RctB family protein PA257_6871 684eff76cca7d2bb8a34766ac0515464 379 Gene3D G3DSA:3.90.1860.10 9 108 1.5E-15 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PA257_6871 684eff76cca7d2bb8a34766ac0515464 379 Gene3D G3DSA:3.90.1860.10 109 373 5.6E-70 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PA257_6248 71fc3cce4857eea0dabe72df05244073 159 Gene3D G3DSA:2.40.70.10 36 157 1.7E-31 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_6248 71fc3cce4857eea0dabe72df05244073 159 Pfam PF13975 gag-polyprotein putative aspartyl protease 53 141 5.5E-24 T 12-10-2018 PA257_6248 71fc3cce4857eea0dabe72df05244073 159 SUPERFAMILY SSF50630 43 145 2.69E-20 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_6248 71fc3cce4857eea0dabe72df05244073 159 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 40 155 1.8E-32 T 12-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal PA257_4527 f939e1ee767bc60e4123116bcbb41953 616 Gene3D G3DSA:2.170.130.10 28 152 9.1E-39 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_4527 f939e1ee767bc60e4123116bcbb41953 616 Pfam PF00593 TonB dependent receptor 185 614 1.0E-47 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_4527 f939e1ee767bc60e4123116bcbb41953 616 Gene3D G3DSA:2.40.170.20 158 614 2.1E-123 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_4527 f939e1ee767bc60e4123116bcbb41953 616 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 1 615 1.2E-294 T 12-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 PA257_4527 f939e1ee767bc60e4123116bcbb41953 616 SUPERFAMILY SSF56935 31 613 1.62E-121 T 12-10-2018 PA257_4527 f939e1ee767bc60e4123116bcbb41953 616 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 147 8.4E-30 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_4452 60293dc89d75d72e2b25aceb0c580834 248 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 131 1.0E-17 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_4452 60293dc89d75d72e2b25aceb0c580834 248 SUPERFAMILY SSF161098 24 223 7.59E-42 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4452 60293dc89d75d72e2b25aceb0c580834 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 238 6.4E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_4452 60293dc89d75d72e2b25aceb0c580834 248 Gene3D G3DSA:1.10.3720.10 18 239 3.2E-48 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2133 f951ad42c77688df030859159a66a40f 923 Gene3D G3DSA:3.30.1360.40 236 334 3.2E-231 T 12-10-2018 PA257_2133 f951ad42c77688df030859159a66a40f 923 SUPERFAMILY SSF101904 534 898 1.7E-99 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PA257_2133 f951ad42c77688df030859159a66a40f 923 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 638 1.4E-298 T 12-10-2018 PA257_2133 f951ad42c77688df030859159a66a40f 923 Gene3D G3DSA:3.90.199.10 33 522 3.2E-231 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 PA257_2133 f951ad42c77688df030859159a66a40f 923 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 885 23.937 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PA257_2133 f951ad42c77688df030859159a66a40f 923 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 4.5E-153 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_2133 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 591 638 1.6E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PA257_2133 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 689 732 3.1E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PA257_2133 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 539 586 1.2E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PA257_2133 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 788 833 2.1E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PA257_2133 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 737 781 1.5E-13 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PA257_2133 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 837 883 2.1E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PA257_2133 f951ad42c77688df030859159a66a40f 923 SUPERFAMILY SSF56719 30 523 2.35E-184 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PA257_2133 f951ad42c77688df030859159a66a40f 923 SMART SM00434 11 500 0.0 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PA257_2133 f951ad42c77688df030859159a66a40f 923 Gene3D G3DSA:1.10.268.10 371 494 3.2E-231 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PA257_3834 64f2e47b9abd287ce843f3f959544ff3 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 165 3.0E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_3834 64f2e47b9abd287ce843f3f959544ff3 168 Gene3D G3DSA:1.10.10.10 90 168 1.1E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3834 64f2e47b9abd287ce843f3f959544ff3 168 Pfam PF04542 Sigma-70 region 2 15 80 9.1E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3834 64f2e47b9abd287ce843f3f959544ff3 168 Gene3D G3DSA:1.10.1740.10 4 77 4.0E-8 T 12-10-2018 PA257_3834 64f2e47b9abd287ce843f3f959544ff3 168 SUPERFAMILY SSF88659 90 166 2.62E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_3834 64f2e47b9abd287ce843f3f959544ff3 168 Pfam PF08281 Sigma-70, region 4 112 163 2.5E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_3834 64f2e47b9abd287ce843f3f959544ff3 168 SUPERFAMILY SSF88946 10 100 8.63E-15 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_5655 e313b4da006e006a4b45bd21e15dff28 145 Pfam PF07419 PilM 19 144 1.2E-29 T 12-10-2018 IPR009987 PilM, inner membrane PA257_5655 e313b4da006e006a4b45bd21e15dff28 145 Gene3D G3DSA:2.40.50.380 108 145 6.7E-25 T 12-10-2018 PA257_5655 e313b4da006e006a4b45bd21e15dff28 145 Gene3D G3DSA:1.10.10.1170 23 107 3.4E-36 T 12-10-2018 PA257_4622 33249f790cd4fa0e5a51709b23f3091c 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 32 89 1.3E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4622 33249f790cd4fa0e5a51709b23f3091c 319 Gene3D G3DSA:3.40.190.10 125 311 8.2E-52 T 12-10-2018 PA257_4622 33249f790cd4fa0e5a51709b23f3091c 319 SUPERFAMILY SSF46785 29 136 1.33E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4622 33249f790cd4fa0e5a51709b23f3091c 319 Gene3D G3DSA:3.40.190.10 185 284 8.2E-52 T 12-10-2018 PA257_4622 33249f790cd4fa0e5a51709b23f3091c 319 Pfam PF03466 LysR substrate binding domain 115 315 3.1E-33 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4622 33249f790cd4fa0e5a51709b23f3091c 319 Gene3D G3DSA:1.10.10.10 28 118 2.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4622 33249f790cd4fa0e5a51709b23f3091c 319 SUPERFAMILY SSF53850 115 317 8.32E-34 T 12-10-2018 PA257_6781 ea0735c99aa431f9e5e7277cf4733620 321 PIRSF PIRSF000105 4 301 2.3E-55 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 PA257_6781 ea0735c99aa431f9e5e7277cf4733620 321 SUPERFAMILY SSF51735 6 185 9.86E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6781 ea0735c99aa431f9e5e7277cf4733620 321 Gene3D G3DSA:1.10.1040.10 189 313 2.9E-27 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_6781 ea0735c99aa431f9e5e7277cf4733620 321 Hamap MF_02129 L-carnitine dehydrogenase [lcdH]. 8 318 54.18 T 12-10-2018 IPR026578 L-carnitine dehydrogenase MetaCyc: PWY-3602|MetaCyc: PWY-7472 PA257_6781 ea0735c99aa431f9e5e7277cf4733620 321 SUPERFAMILY SSF48179 188 275 1.28E-14 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_6781 ea0735c99aa431f9e5e7277cf4733620 321 Gene3D G3DSA:3.40.50.720 7 188 3.3E-48 T 12-10-2018 PA257_6781 ea0735c99aa431f9e5e7277cf4733620 321 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 11 184 1.0E-39 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_6781 ea0735c99aa431f9e5e7277cf4733620 321 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 256 4.2E-15 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_3946 5bd7398071c4f9c1d2729e5e648a437f 258 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 171 258 2.5E-26 T 12-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PA257_3946 5bd7398071c4f9c1d2729e5e648a437f 258 SUPERFAMILY SSF56281 3 258 5.24E-73 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_3946 5bd7398071c4f9c1d2729e5e648a437f 258 Pfam PF00753 Metallo-beta-lactamase superfamily 14 170 1.7E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_3946 5bd7398071c4f9c1d2729e5e648a437f 258 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 258 44.824 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PA257_3946 5bd7398071c4f9c1d2729e5e648a437f 258 SMART SM00849 12 170 3.6E-38 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_3946 5bd7398071c4f9c1d2729e5e648a437f 258 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 258 1.1E-105 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PA257_3946 5bd7398071c4f9c1d2729e5e648a437f 258 Gene3D G3DSA:3.60.15.10 1 258 2.6E-88 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_3946 5bd7398071c4f9c1d2729e5e648a437f 258 PIRSF PIRSF005457 1 258 4.7E-104 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PA257_4879 eaff2b0000b45bbcc8520a201c9d50d9 73 Gene3D G3DSA:2.40.160.10 15 73 2.2E-15 T 12-10-2018 IPR023614 Porin domain superfamily PA257_4879 eaff2b0000b45bbcc8520a201c9d50d9 73 Pfam PF03573 outer membrane porin, OprD family 34 73 3.8E-10 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_4780 c212f9e6815529e69ab652c13c8b6d09 99 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 4.0E-19 T 12-10-2018 IPR009525 Protein of unknown function DUF1145 PA257_0458 9a93fd374df412360e5e06d63a3c6ed1 244 SUPERFAMILY SSF53335 22 243 7.02E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0458 9a93fd374df412360e5e06d63a3c6ed1 244 Gene3D G3DSA:3.40.50.150 35 244 1.0E-68 T 12-10-2018 PA257_0458 9a93fd374df412360e5e06d63a3c6ed1 244 Pfam PF02390 Putative methyltransferase 69 238 5.0E-55 T 12-10-2018 PA257_0458 9a93fd374df412360e5e06d63a3c6ed1 244 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 29 243 29.786 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 PA257_0458 9a93fd374df412360e5e06d63a3c6ed1 244 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 55 243 7.6E-59 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 PA257_0410 35f82b8c7695ef188d85b7fd929ed2f8 345 SUPERFAMILY SSF55073 194 339 6.91E-44 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_0410 35f82b8c7695ef188d85b7fd929ed2f8 345 Gene3D G3DSA:3.30.450.20 17 134 1.2E-29 T 12-10-2018 PA257_0410 35f82b8c7695ef188d85b7fd929ed2f8 345 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 146 8.1E-8 T 12-10-2018 IPR000014 PAS domain PA257_0410 35f82b8c7695ef188d85b7fd929ed2f8 345 Pfam PF00990 Diguanylate cyclase, GGDEF domain 190 338 8.7E-45 T 12-10-2018 IPR000160 GGDEF domain PA257_0410 35f82b8c7695ef188d85b7fd929ed2f8 345 Pfam PF08447 PAS fold 44 132 4.5E-24 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_0410 35f82b8c7695ef188d85b7fd929ed2f8 345 SMART SM00267 178 345 9.9E-58 T 12-10-2018 IPR000160 GGDEF domain PA257_0410 35f82b8c7695ef188d85b7fd929ed2f8 345 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 338 1.2E-45 T 12-10-2018 IPR000160 GGDEF domain PA257_0410 35f82b8c7695ef188d85b7fd929ed2f8 345 SUPERFAMILY SSF55785 27 140 9.25E-19 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0410 35f82b8c7695ef188d85b7fd929ed2f8 345 SMART SM00091 21 89 4.7E-5 T 12-10-2018 IPR000014 PAS domain PA257_0410 35f82b8c7695ef188d85b7fd929ed2f8 345 Gene3D G3DSA:3.30.70.270 174 345 3.7E-53 T 12-10-2018 PA257_4849 797c1f1bdafb5220e21b06cd1e6c00f2 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.3E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4849 797c1f1bdafb5220e21b06cd1e6c00f2 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4849 797c1f1bdafb5220e21b06cd1e6c00f2 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4849 797c1f1bdafb5220e21b06cd1e6c00f2 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.3E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4849 797c1f1bdafb5220e21b06cd1e6c00f2 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.3E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4849 797c1f1bdafb5220e21b06cd1e6c00f2 299 Gene3D G3DSA:3.40.50.720 2 296 9.0E-69 T 12-10-2018 PA257_4849 797c1f1bdafb5220e21b06cd1e6c00f2 299 SUPERFAMILY SSF51735 2 211 4.48E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4849 797c1f1bdafb5220e21b06cd1e6c00f2 299 Pfam PF00106 short chain dehydrogenase 3 192 2.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3259 8fabd194584810ebd44487d44b8f21b7 80 Pfam PF07867 Protein of unknown function (DUF1654) 12 78 7.0E-31 T 12-10-2018 IPR012449 Bacteriophage F116, Orf28 PA257_3973 ae52524c6292f844aebd870057fb6361 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 3.6E-67 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 Gene3D G3DSA:3.40.50.10860 8 276 9.5E-107 T 12-10-2018 PA257_3973 ae52524c6292f844aebd870057fb6361 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 8.0E-40 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 7.5E-84 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 7.5E-84 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 7.5E-84 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 7.5E-84 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 7.5E-84 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 7.5E-84 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 7.5E-84 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 SUPERFAMILY SSF53223 1 122 4.7E-41 T 12-10-2018 PA257_3973 ae52524c6292f844aebd870057fb6361 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.159 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PA257_3973 ae52524c6292f844aebd870057fb6361 284 Gene3D G3DSA:3.40.50.720 6 259 9.5E-107 T 12-10-2018 PA257_3973 ae52524c6292f844aebd870057fb6361 284 SUPERFAMILY SSF51735 123 283 7.77E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2458 1078828c5afc16a5c07e83aa83d22dd6 323 Pfam PF03734 L,D-transpeptidase catalytic domain 98 230 9.1E-16 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PA257_2458 1078828c5afc16a5c07e83aa83d22dd6 323 SUPERFAMILY SSF141523 96 230 4.32E-31 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PA257_2458 1078828c5afc16a5c07e83aa83d22dd6 323 Gene3D G3DSA:2.40.440.10 21 303 7.4E-95 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PA257_2151 c31b635dcc08943b9825b4c6d5578c55 109 Gene3D G3DSA:1.10.150.320 28 106 1.9E-17 T 12-10-2018 PA257_2151 c31b635dcc08943b9825b4c6d5578c55 109 SUPERFAMILY SSF47781 34 107 3.22E-24 T 12-10-2018 IPR010994 RuvA domain 2-like PA257_2151 c31b635dcc08943b9825b4c6d5578c55 109 SMART SM00278 86 105 30.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PA257_2151 c31b635dcc08943b9825b4c6d5578c55 109 SMART SM00278 56 75 2.7 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PA257_2151 c31b635dcc08943b9825b4c6d5578c55 109 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 44 108 7.8E-21 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain PA257_2151 c31b635dcc08943b9825b4c6d5578c55 109 Pfam PF12836 Helix-hairpin-helix motif 44 106 3.9E-20 T 12-10-2018 PA257_0872 e0fcbc52a7717969fb71b8a1f6ffed82 570 Pfam PF00005 ABC transporter 345 493 8.2E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0872 e0fcbc52a7717969fb71b8a1f6ffed82 570 Gene3D G3DSA:1.20.1560.10 2 317 1.2E-31 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_0872 e0fcbc52a7717969fb71b8a1f6ffed82 570 Pfam PF00664 ABC transporter transmembrane region 53 185 1.3E-9 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PA257_0872 e0fcbc52a7717969fb71b8a1f6ffed82 570 SMART SM00382 354 545 4.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0872 e0fcbc52a7717969fb71b8a1f6ffed82 570 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0872 e0fcbc52a7717969fb71b8a1f6ffed82 570 SUPERFAMILY SSF52540 322 563 5.43E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0872 e0fcbc52a7717969fb71b8a1f6ffed82 570 Gene3D G3DSA:3.40.50.300 321 568 2.5E-70 T 12-10-2018 PA257_0872 e0fcbc52a7717969fb71b8a1f6ffed82 570 SUPERFAMILY SSF90123 5 318 1.96E-35 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_5838 42a03bfa5ac4007a7b67faaf724238a1 790 Pfam PF00577 Outer membrane usher protein 266 691 2.1E-22 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 PA257_5838 42a03bfa5ac4007a7b67faaf724238a1 790 Gene3D G3DSA:2.60.40.2610 611 701 2.2E-10 T 12-10-2018 PA257_5838 42a03bfa5ac4007a7b67faaf724238a1 790 Gene3D G3DSA:2.60.40.3110 246 329 6.4E-8 T 12-10-2018 PA257_5838 42a03bfa5ac4007a7b67faaf724238a1 790 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 282 292 - T 12-10-2018 IPR018030 Fimbrial membrane usher, conserved site PA257_5838 42a03bfa5ac4007a7b67faaf724238a1 790 Gene3D G3DSA:2.60.40.2070 707 786 4.3E-7 T 12-10-2018 PA257_5838 42a03bfa5ac4007a7b67faaf724238a1 790 Pfam PF13953 PapC C-terminal domain 707 768 4.5E-15 T 12-10-2018 IPR025949 PapC-like, C-terminal domain PA257_0328 d8cd957ef946826f56b974138e37e5bd 483 Gene3D G3DSA:3.40.309.10 258 447 4.6E-189 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_0328 d8cd957ef946826f56b974138e37e5bd 483 SUPERFAMILY SSF53720 7 481 5.11E-175 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_0328 d8cd957ef946826f56b974138e37e5bd 483 Gene3D G3DSA:3.40.605.10 25 472 4.6E-189 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_0328 d8cd957ef946826f56b974138e37e5bd 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_0328 d8cd957ef946826f56b974138e37e5bd 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_0328 d8cd957ef946826f56b974138e37e5bd 483 Pfam PF00171 Aldehyde dehydrogenase family 19 477 4.4E-173 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_0328 d8cd957ef946826f56b974138e37e5bd 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 3.3E-236 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 SUPERFAMILY SSF51905 6 330 6.42E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 Gene3D G3DSA:1.10.10.1100 370 439 2.2E-18 T 12-10-2018 PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 Gene3D G3DSA:3.50.50.60 6 312 3.8E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.8E-10 T 12-10-2018 PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 1.8E-10 T 12-10-2018 PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 1.8E-10 T 12-10-2018 PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.8E-10 T 12-10-2018 PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 Pfam PF04324 BFD-like [2Fe-2S] binding domain 381 424 7.8E-12 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 311 2.2E-21 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 Gene3D G3DSA:3.50.50.60 119 265 3.8E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3535 96c3067d23136e03a0dc9211309f3f8f 464 PIRSF PIRSF037495 1 464 1.9E-137 T 12-10-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 PA257_1126 60721cfc527b5a3edc9219e57027090c 153 Gene3D G3DSA:3.40.630.30 1 141 1.2E-37 T 12-10-2018 PA257_1126 60721cfc527b5a3edc9219e57027090c 153 SUPERFAMILY SSF55729 1 146 1.51E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_1126 60721cfc527b5a3edc9219e57027090c 153 Pfam PF00583 Acetyltransferase (GNAT) family 32 135 1.2E-13 T 12-10-2018 IPR000182 GNAT domain PA257_3563 f8e605f7bb278277e97a75128d12d8db 684 Gene3D G3DSA:3.20.20.80 147 668 1.9E-120 T 12-10-2018 PA257_3563 f8e605f7bb278277e97a75128d12d8db 684 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 116 672 1.4E-85 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PA257_3563 f8e605f7bb278277e97a75128d12d8db 684 Pfam PF02446 4-alpha-glucanotransferase 156 652 2.1E-103 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PA257_3563 f8e605f7bb278277e97a75128d12d8db 684 SUPERFAMILY SSF51445 143 671 1.39E-130 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_4825 29bd45857651562da96220d22923739b 523 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 30 509 2.0E-173 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4825 29bd45857651562da96220d22923739b 523 Pfam PF00425 chorismate binding enzyme 239 498 3.9E-82 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PA257_4825 29bd45857651562da96220d22923739b 523 Pfam PF04715 Anthranilate synthase component I, N terminal region 44 187 5.6E-6 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4825 29bd45857651562da96220d22923739b 523 Gene3D G3DSA:3.60.120.10 8 515 2.6E-154 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_4825 29bd45857651562da96220d22923739b 523 PRINTS PR00095 Anthranilate synthase component I signature 346 359 8.5E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4825 29bd45857651562da96220d22923739b 523 PRINTS PR00095 Anthranilate synthase component I signature 360 373 8.5E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4825 29bd45857651562da96220d22923739b 523 PRINTS PR00095 Anthranilate synthase component I signature 440 454 8.5E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4825 29bd45857651562da96220d22923739b 523 PRINTS PR00095 Anthranilate synthase component I signature 455 469 8.5E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4825 29bd45857651562da96220d22923739b 523 PIRSF PIRSF001373 2 517 2.5E-217 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PA257_4825 29bd45857651562da96220d22923739b 523 SUPERFAMILY SSF56322 29 506 1.01E-138 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_2443 70988e75f7e4529dca6cd67e2f3ca0dd 490 SUPERFAMILY SSF58104 181 490 1.31E-77 T 12-10-2018 PA257_2443 70988e75f7e4529dca6cd67e2f3ca0dd 490 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 297 456 5.7E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2443 70988e75f7e4529dca6cd67e2f3ca0dd 490 Pfam PF00672 HAMP domain 162 205 6.2E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2443 70988e75f7e4529dca6cd67e2f3ca0dd 490 SMART SM00283 228 489 6.3E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2443 70988e75f7e4529dca6cd67e2f3ca0dd 490 SMART SM00304 160 213 6.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2443 70988e75f7e4529dca6cd67e2f3ca0dd 490 Gene3D G3DSA:1.10.287.950 160 490 9.1E-73 T 12-10-2018 PA257_3922 aaf89f0d42765cf83011c9ed8a671ba2 193 SUPERFAMILY SSF48498 77 191 5.56E-36 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_3922 aaf89f0d42765cf83011c9ed8a671ba2 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 52 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_3922 aaf89f0d42765cf83011c9ed8a671ba2 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 52 6.0E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3922 aaf89f0d42765cf83011c9ed8a671ba2 193 SUPERFAMILY SSF46689 3 80 5.13E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3922 aaf89f0d42765cf83011c9ed8a671ba2 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 2.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3922 aaf89f0d42765cf83011c9ed8a671ba2 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 2.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3922 aaf89f0d42765cf83011c9ed8a671ba2 193 Gene3D G3DSA:1.10.357.10 1 193 2.2E-84 T 12-10-2018 PA257_3910 99723154da9608bfe23b35d80faa323a 172 Gene3D G3DSA:2.40.128.650 20 172 4.8E-86 T 12-10-2018 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 Gene3D G3DSA:2.40.30.170 297 343 2.0E-10 T 12-10-2018 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 Gene3D G3DSA:2.40.50.100 261 296 2.0E-10 T 12-10-2018 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 Gene3D G3DSA:2.40.30.170 53 64 9.2E-6 T 12-10-2018 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 Gene3D G3DSA:1.10.287.470 207 254 2.0E-10 T 12-10-2018 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 Pfam PF13437 HlyD family secretion protein 261 389 1.3E-13 T 12-10-2018 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 272 293 7.1E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 329 7.1E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 7.1E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 401 418 7.1E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 Gene3D G3DSA:1.10.287.470 99 174 9.2E-6 T 12-10-2018 PA257_0953 cb6c6ee3b325386b802d314621d060ad 418 Gene3D G3DSA:2.40.50.100 65 98 9.2E-6 T 12-10-2018 PA257_2357 3c04120cf62d4f7709d53a1116b383a9 315 Pfam PF12697 Alpha/beta hydrolase family 65 298 3.0E-26 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2357 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 147 160 1.2E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2357 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 103 1.2E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2357 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 1.2E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2357 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 250 264 1.2E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2357 3c04120cf62d4f7709d53a1116b383a9 315 Gene3D G3DSA:3.40.50.1820 39 312 4.1E-73 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2357 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00412 Epoxide hydrolase signature 88 103 2.9E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_2357 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00412 Epoxide hydrolase signature 147 160 2.9E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_2357 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00412 Epoxide hydrolase signature 281 303 2.9E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_2357 3c04120cf62d4f7709d53a1116b383a9 315 SUPERFAMILY SSF53474 37 304 7.12E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6775 01a3ce5d271ac54f587756e28fd75ed0 367 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_6775 01a3ce5d271ac54f587756e28fd75ed0 367 Gene3D G3DSA:1.10.10.60 220 327 1.6E-35 T 12-10-2018 PA257_6775 01a3ce5d271ac54f587756e28fd75ed0 367 SUPERFAMILY SSF52317 15 205 1.22E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_6775 01a3ce5d271ac54f587756e28fd75ed0 367 Pfam PF01965 DJ-1/PfpI family 20 183 1.3E-17 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_6775 01a3ce5d271ac54f587756e28fd75ed0 367 SUPERFAMILY SSF46689 276 325 8.06E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6775 01a3ce5d271ac54f587756e28fd75ed0 367 SUPERFAMILY SSF46689 224 274 2.15E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6775 01a3ce5d271ac54f587756e28fd75ed0 367 Pfam PF12833 Helix-turn-helix domain 246 324 1.3E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_6775 01a3ce5d271ac54f587756e28fd75ed0 367 Gene3D G3DSA:3.40.50.880 12 213 4.6E-58 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_6775 01a3ce5d271ac54f587756e28fd75ed0 367 SMART SM00342 240 323 9.5E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0834 b8e51c0942d9744f3541a24c81218d3c 99 Pfam PF00276 Ribosomal protein L23 8 94 9.3E-31 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PA257_0834 b8e51c0942d9744f3541a24c81218d3c 99 Gene3D G3DSA:3.30.70.330 1 99 2.2E-34 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PA257_0834 b8e51c0942d9744f3541a24c81218d3c 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.008 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PA257_0834 b8e51c0942d9744f3541a24c81218d3c 99 SUPERFAMILY SSF54189 1 91 1.62E-29 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0420 8b8cff69ba41d16566967324e7a8faf6 383 Gene3D G3DSA:3.20.20.190 53 380 9.5E-114 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PA257_0420 8b8cff69ba41d16566967324e7a8faf6 383 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 60 374 1.1E-50 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PA257_0420 8b8cff69ba41d16566967324e7a8faf6 383 SUPERFAMILY SSF51695 55 380 6.8E-77 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PA257_4869 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 13 130 5.5E-33 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PA257_4869 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 Gene3D G3DSA:3.10.129.10 3 142 7.5E-45 T 12-10-2018 PA257_4869 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 PIRSF PIRSF003230 3 142 1.9E-44 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PA257_4869 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 SUPERFAMILY SSF54637 8 137 1.45E-41 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_4869 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 Pfam PF03061 Thioesterase superfamily 24 107 2.3E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_4869 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 10 135 4.7E-48 T 12-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 PA257_4408 2a2bcc130b13b87821457be9684737f0 242 Pfam PF00535 Glycosyl transferase family 2 42 122 4.7E-5 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_4408 2a2bcc130b13b87821457be9684737f0 242 Gene3D G3DSA:3.90.550.10 27 218 7.2E-12 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4408 2a2bcc130b13b87821457be9684737f0 242 SUPERFAMILY SSF53448 37 217 1.03E-12 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_0895 6063920dc822fc9d754014cf81cdb486 346 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 331 6.4E-88 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_0895 6063920dc822fc9d754014cf81cdb486 346 Pfam PF07478 D-ala D-ala ligase C-terminus 146 330 3.1E-51 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_0895 6063920dc822fc9d754014cf81cdb486 346 SUPERFAMILY SSF56059 133 334 2.65E-54 T 12-10-2018 PA257_0895 6063920dc822fc9d754014cf81cdb486 346 SUPERFAMILY SSF52440 5 132 2.49E-26 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_0895 6063920dc822fc9d754014cf81cdb486 346 PIRSF PIRSF039102 3 343 7.0E-98 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_0895 6063920dc822fc9d754014cf81cdb486 346 Gene3D G3DSA:3.30.1490.20 148 211 4.8E-72 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_0895 6063920dc822fc9d754014cf81cdb486 346 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 100 111 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_0895 6063920dc822fc9d754014cf81cdb486 346 Gene3D G3DSA:3.40.50.20 3 121 2.6E-21 T 12-10-2018 PA257_0895 6063920dc822fc9d754014cf81cdb486 346 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 277 305 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_0895 6063920dc822fc9d754014cf81cdb486 346 Pfam PF01820 D-ala D-ala ligase N-terminus 7 123 7.8E-22 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_0895 6063920dc822fc9d754014cf81cdb486 346 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 335 35.446 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_0895 6063920dc822fc9d754014cf81cdb486 346 Gene3D G3DSA:3.30.470.20 122 330 4.8E-72 T 12-10-2018 PA257_0099 2dbc7507509f90cf6ffaade8449a1b67 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 4.3E-157 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 PA257_0099 2dbc7507509f90cf6ffaade8449a1b67 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 5.1E-160 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 PA257_4199 6ae7f5bc8a7f913dc65b62672520ab51 235 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 108 1.9E-30 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4199 6ae7f5bc8a7f913dc65b62672520ab51 235 Gene3D G3DSA:3.10.20.30 1 104 2.4E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_4199 6ae7f5bc8a7f913dc65b62672520ab51 235 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_4199 6ae7f5bc8a7f913dc65b62672520ab51 235 SUPERFAMILY SSF46548 105 232 2.27E-38 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_4199 6ae7f5bc8a7f913dc65b62672520ab51 235 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 6 227 3.9E-84 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_4199 6ae7f5bc8a7f913dc65b62672520ab51 235 Pfam PF13534 4Fe-4S dicluster domain 145 218 4.3E-9 T 12-10-2018 PA257_4199 6ae7f5bc8a7f913dc65b62672520ab51 235 Gene3D G3DSA:1.10.1060.10 105 235 2.9E-56 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_4199 6ae7f5bc8a7f913dc65b62672520ab51 235 SUPERFAMILY SSF54292 2 104 3.3E-26 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_1465 97319d34c8c025d500687e9b9f5f807e 174 Gene3D G3DSA:2.160.10.10 1 172 2.4E-63 T 12-10-2018 PA257_1465 97319d34c8c025d500687e9b9f5f807e 174 SUPERFAMILY SSF51161 4 167 9.01E-48 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_1465 97319d34c8c025d500687e9b9f5f807e 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 6.6E-9 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_4605 a86a44e66dd65ef524b13a551a6aff75 304 SUPERFAMILY SSF53850 90 301 2.9E-47 T 12-10-2018 PA257_4605 a86a44e66dd65ef524b13a551a6aff75 304 Gene3D G3DSA:3.40.190.10 93 293 2.6E-65 T 12-10-2018 PA257_4605 a86a44e66dd65ef524b13a551a6aff75 304 Gene3D G3DSA:3.40.190.10 164 267 2.6E-65 T 12-10-2018 PA257_4605 a86a44e66dd65ef524b13a551a6aff75 304 Gene3D G3DSA:1.10.10.10 3 89 1.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4605 a86a44e66dd65ef524b13a551a6aff75 304 SUPERFAMILY SSF46785 2 112 9.41E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4605 a86a44e66dd65ef524b13a551a6aff75 304 Pfam PF03466 LysR substrate binding domain 91 296 4.0E-49 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4605 a86a44e66dd65ef524b13a551a6aff75 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0184 fc79cb2b58b28008ddc1087b59764f76 356 Gene3D G3DSA:2.40.420.20 34 349 7.9E-68 T 12-10-2018 PA257_0184 fc79cb2b58b28008ddc1087b59764f76 356 Gene3D G3DSA:1.10.287.470 89 161 7.9E-68 T 12-10-2018 PA257_0184 fc79cb2b58b28008ddc1087b59764f76 356 SUPERFAMILY SSF111369 47 274 8.63E-24 T 12-10-2018 PA257_0184 fc79cb2b58b28008ddc1087b59764f76 356 Gene3D G3DSA:2.40.30.170 41 277 7.9E-68 T 12-10-2018 PA257_0184 fc79cb2b58b28008ddc1087b59764f76 356 Gene3D G3DSA:2.40.50.100 55 201 7.9E-68 T 12-10-2018 PA257_0184 fc79cb2b58b28008ddc1087b59764f76 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 264 4.0E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_0184 fc79cb2b58b28008ddc1087b59764f76 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 351 5.1E-74 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_2752 f6bf75176ef1d29c7076c781f0787201 321 Pfam PF13529 Peptidase_C39 like family 38 146 1.5E-7 T 12-10-2018 IPR039564 Peptidase C39-like PA257_2752 f6bf75176ef1d29c7076c781f0787201 321 Gene3D G3DSA:1.25.40.10 191 308 2.5E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2752 f6bf75176ef1d29c7076c781f0787201 321 Gene3D G3DSA:3.90.70.10 44 187 2.9E-12 T 12-10-2018 PA257_2752 f6bf75176ef1d29c7076c781f0787201 321 SUPERFAMILY SSF48452 193 293 4.47E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_3956 e5a40123298533bd77ac5fd6af139ed8 90 SUPERFAMILY SSF47729 1 90 2.94E-31 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_3956 e5a40123298533bd77ac5fd6af139ed8 90 SMART SM00411 1 90 9.4E-43 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_3956 e5a40123298533bd77ac5fd6af139ed8 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.6E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_3956 e5a40123298533bd77ac5fd6af139ed8 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.6E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_3956 e5a40123298533bd77ac5fd6af139ed8 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.6E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_3956 e5a40123298533bd77ac5fd6af139ed8 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-32 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_3956 e5a40123298533bd77ac5fd6af139ed8 90 Gene3D G3DSA:4.10.520.10 1 90 3.5E-35 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_3956 e5a40123298533bd77ac5fd6af139ed8 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PA257_4432 8a80595c3bf08cc6da674f359055d752 195 SUPERFAMILY SSF47413 22 83 1.15E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_4432 8a80595c3bf08cc6da674f359055d752 195 Pfam PF07883 Cupin domain 139 189 8.4E-9 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_4432 8a80595c3bf08cc6da674f359055d752 195 SUPERFAMILY SSF51182 99 190 4.33E-16 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4432 8a80595c3bf08cc6da674f359055d752 195 Gene3D G3DSA:1.10.260.40 11 89 8.5E-17 T 12-10-2018 PA257_4432 8a80595c3bf08cc6da674f359055d752 195 Gene3D G3DSA:2.60.120.10 106 194 1.1E-18 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4432 8a80595c3bf08cc6da674f359055d752 195 SMART SM00530 27 82 6.1E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_4432 8a80595c3bf08cc6da674f359055d752 195 Pfam PF01381 Helix-turn-helix 28 77 6.6E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_1780 18bf162a20e58e6272875808040d4f8f 1099 Gene3D G3DSA:3.30.870.10 431 512 2.5E-6 T 12-10-2018 PA257_1780 18bf162a20e58e6272875808040d4f8f 1099 Gene3D G3DSA:3.30.870.10 44 210 4.1E-13 T 12-10-2018 PA257_1780 18bf162a20e58e6272875808040d4f8f 1099 SUPERFAMILY SSF56024 46 495 1.37E-27 T 12-10-2018 PA257_1780 18bf162a20e58e6272875808040d4f8f 1099 Pfam PF13091 PLD-like domain 846 893 2.8E-6 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PA257_1780 18bf162a20e58e6272875808040d4f8f 1099 SMART SM00155 850 877 3.7E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_1780 18bf162a20e58e6272875808040d4f8f 1099 SMART SM00155 162 189 0.0016 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_1780 18bf162a20e58e6272875808040d4f8f 1099 Pfam PF00614 Phospholipase D Active site motif 164 189 1.5E-7 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_1780 18bf162a20e58e6272875808040d4f8f 1099 SUPERFAMILY SSF56024 606 925 8.63E-18 T 12-10-2018 PA257_2678 13b24ca852c0702296e3baca83adc9cb 307 ProSitePatterns PS00958 Transaldolase active site. 122 139 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PA257_2678 13b24ca852c0702296e3baca83adc9cb 307 Hamap MF_00492 Transaldolase [tal]. 2 307 50.203 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PA257_2678 13b24ca852c0702296e3baca83adc9cb 307 TIGRFAM TIGR00874 talAB: transaldolase 4 303 8.9E-134 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PA257_2678 13b24ca852c0702296e3baca83adc9cb 307 Gene3D G3DSA:3.20.20.70 1 307 2.2E-129 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2678 13b24ca852c0702296e3baca83adc9cb 307 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PA257_2678 13b24ca852c0702296e3baca83adc9cb 307 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 301 1.1E-96 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PA257_2678 13b24ca852c0702296e3baca83adc9cb 307 SUPERFAMILY SSF51569 1 305 1.15E-109 T 12-10-2018 PA257_6237 c581e54cb592b47f2541111de6ad9054 283 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 8.8E-114 T 12-10-2018 IPR022522 Flagellar motor stator, MotA PA257_6237 c581e54cb592b47f2541111de6ad9054 283 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 239 3.4E-9 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel PA257_6237 c581e54cb592b47f2541111de6ad9054 283 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site PA257_5881 e2a8ef443277e3c2811f12804e369e0c 150 Pfam PF00583 Acetyltransferase (GNAT) family 29 122 2.9E-16 T 12-10-2018 IPR000182 GNAT domain PA257_5881 e2a8ef443277e3c2811f12804e369e0c 150 SUPERFAMILY SSF55729 5 148 6.92E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_5881 e2a8ef443277e3c2811f12804e369e0c 150 Gene3D G3DSA:3.40.630.30 6 149 1.9E-42 T 12-10-2018 PA257_5881 e2a8ef443277e3c2811f12804e369e0c 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 144 2.5E-48 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 Gene3D G3DSA:3.40.120.10 173 360 2.0E-66 T 12-10-2018 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 9.0E-44 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 Gene3D G3DSA:3.30.310.50 369 445 8.0E-25 T 12-10-2018 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 SUPERFAMILY SSF53738 257 363 1.18E-29 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 5.2E-19 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 46.769 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 SUPERFAMILY SSF53738 155 256 2.43E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 SUPERFAMILY SSF55957 357 444 1.44E-20 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 SUPERFAMILY SSF53738 2 180 9.81E-47 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 Gene3D G3DSA:3.40.120.10 2 153 9.9E-47 T 12-10-2018 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 439 1.7E-11 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 Gene3D G3DSA:3.40.120.10 256 338 2.0E-66 T 12-10-2018 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 5.8E-193 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 362 1.9E-30 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 9.2E-15 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 9.2E-15 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_5966 8d7e04a71b019cadae4aa6b0d3cb9362 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 9.2E-15 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PA257_6836 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 SUPERFAMILY SSF53697 84 278 2.43E-37 T 12-10-2018 PA257_6836 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Gene3D G3DSA:1.10.10.10 1 79 4.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6836 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 76 2.8E-24 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PA257_6836 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 ProSitePatterns PS00356 LacI-type HTH domain signature. 37 55 - T 12-10-2018 PA257_6836 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Gene3D G3DSA:3.40.50.10490 93 274 4.4E-39 T 12-10-2018 PA257_6836 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 SUPERFAMILY SSF46689 2 76 2.87E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6836 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Pfam PF01380 SIS domain 125 252 8.1E-16 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PA257_6802 92e6be119df851571cfe457ddb85d9e3 96 Pfam PF05164 Cell division protein ZapA 9 91 7.7E-13 T 12-10-2018 IPR007838 Cell division protein ZapA-like PA257_6802 92e6be119df851571cfe457ddb85d9e3 96 SUPERFAMILY SSF102829 10 93 8.11E-16 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily PA257_6802 92e6be119df851571cfe457ddb85d9e3 96 Gene3D G3DSA:1.10.20.30 1 42 3.4E-5 T 12-10-2018 PA257_5481 486b2a5939f7e849db1b825e4a12af5a 448 Gene3D G3DSA:3.90.190.20 311 448 6.0E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_5481 486b2a5939f7e849db1b825e4a12af5a 448 Pfam PF08245 Mur ligase middle domain 114 285 5.3E-26 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PA257_5481 486b2a5939f7e849db1b825e4a12af5a 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 380 1.3E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PA257_5481 486b2a5939f7e849db1b825e4a12af5a 448 SUPERFAMILY SSF53244 305 447 7.1E-47 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_5481 486b2a5939f7e849db1b825e4a12af5a 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 447 34.528 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PA257_5481 486b2a5939f7e849db1b825e4a12af5a 448 Gene3D G3DSA:3.40.50.720 7 96 3.4E-18 T 12-10-2018 PA257_5481 486b2a5939f7e849db1b825e4a12af5a 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 445 9.8E-118 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PA257_5481 486b2a5939f7e849db1b825e4a12af5a 448 Gene3D G3DSA:3.40.1190.10 98 305 1.3E-65 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_5481 486b2a5939f7e849db1b825e4a12af5a 448 SUPERFAMILY SSF53623 100 303 2.62E-52 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_5481 486b2a5939f7e849db1b825e4a12af5a 448 SUPERFAMILY SSF51984 11 97 5.62E-15 T 12-10-2018 PA257_1729 8315c4cbb75672838621aafe92a4967f 339 SUPERFAMILY SSF53448 8 255 1.39E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_1729 8315c4cbb75672838621aafe92a4967f 339 Pfam PF00535 Glycosyl transferase family 2 10 172 3.8E-32 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_1729 8315c4cbb75672838621aafe92a4967f 339 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 1 327 63.631 T 12-10-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 PA257_1729 8315c4cbb75672838621aafe92a4967f 339 Gene3D G3DSA:3.90.550.10 5 234 3.3E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_5367 23b7d5bab891fca13d20552e2cd50c6a 70 Pfam PF04964 Flp/Fap pilin component 15 64 5.5E-16 T 12-10-2018 IPR007047 Flp/Fap pilin component PA257_1366 8e7281c82d225700253d675732f26c19 429 Pfam PF03129 Anticodon binding domain 335 422 2.0E-8 T 12-10-2018 IPR004154 Anticodon-binding PA257_1366 8e7281c82d225700253d675732f26c19 429 SUPERFAMILY SSF52954 330 425 5.4E-23 T 12-10-2018 PA257_1366 8e7281c82d225700253d675732f26c19 429 Gene3D G3DSA:3.40.50.800 330 424 8.7E-24 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily PA257_1366 8e7281c82d225700253d675732f26c19 429 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 424 33.264 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 PA257_1366 8e7281c82d225700253d675732f26c19 429 Pfam PF13393 Histidyl-tRNA synthetase 10 313 6.3E-45 T 12-10-2018 PA257_1366 8e7281c82d225700253d675732f26c19 429 Gene3D G3DSA:3.30.930.10 2 326 9.3E-113 T 12-10-2018 PA257_1366 8e7281c82d225700253d675732f26c19 429 PIRSF PIRSF001549 2 425 3.3E-115 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 PA257_1366 8e7281c82d225700253d675732f26c19 429 SUPERFAMILY SSF55681 6 323 1.11E-101 T 12-10-2018 PA257_1366 8e7281c82d225700253d675732f26c19 429 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 414 2.9E-152 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 PA257_6463 eae1402159068ddafa09a2805dcf776a 594 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 18 75 1.5E-23 T 12-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 PA257_6463 eae1402159068ddafa09a2805dcf776a 594 Pfam PF17289 Terminase RNaseH-like domain 418 576 3.8E-37 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like PA257_6463 eae1402159068ddafa09a2805dcf776a 594 Pfam PF03237 Terminase-like family 169 389 1.0E-61 T 12-10-2018 IPR004921 Terminase large subunit, T4likevirus-type PA257_6463 eae1402159068ddafa09a2805dcf776a 594 Gene3D G3DSA:3.40.50.300 90 309 1.9E-22 T 12-10-2018 PA257_6463 eae1402159068ddafa09a2805dcf776a 594 Gene3D G3DSA:3.30.420.240 403 577 2.5E-11 T 12-10-2018 PA257_3468 2504458adc1176cc5a25bc8f7092782c 323 Pfam PF00589 Phage integrase family 134 295 3.4E-13 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_3468 2504458adc1176cc5a25bc8f7092782c 323 Gene3D G3DSA:1.10.443.10 99 296 3.6E-45 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_3468 2504458adc1176cc5a25bc8f7092782c 323 Gene3D G3DSA:1.10.150.130 2 98 3.3E-19 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_3468 2504458adc1176cc5a25bc8f7092782c 323 SUPERFAMILY SSF47823 7 97 7.85E-25 T 12-10-2018 PA257_3468 2504458adc1176cc5a25bc8f7092782c 323 SUPERFAMILY SSF56349 117 299 2.94E-40 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_5314 ce9e67bd8a263fbbd4f5851156613fa9 4177 Pfam PF05860 haemagglutination activity domain 134 249 1.7E-21 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_5314 ce9e67bd8a263fbbd4f5851156613fa9 4177 Gene3D G3DSA:2.160.20.10 776 1043 1.5E-6 T 12-10-2018 IPR012334 Pectin lyase fold PA257_5314 ce9e67bd8a263fbbd4f5851156613fa9 4177 SUPERFAMILY SSF51126 142 497 1.04E-36 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor PA257_5314 ce9e67bd8a263fbbd4f5851156613fa9 4177 Gene3D G3DSA:2.160.20.10 131 419 6.1E-53 T 12-10-2018 IPR012334 Pectin lyase fold PA257_5314 ce9e67bd8a263fbbd4f5851156613fa9 4177 SUPERFAMILY SSF51126 826 980 2.39E-6 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor PA257_5314 ce9e67bd8a263fbbd4f5851156613fa9 4177 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 3968 4077 6.9E-41 T 12-10-2018 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 PA257_5314 ce9e67bd8a263fbbd4f5851156613fa9 4177 SMART SM00912 133 249 8.3E-30 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_5314 ce9e67bd8a263fbbd4f5851156613fa9 4177 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 170 245 1.5E-21 T 12-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal PA257_0635 f4ad8204d267e30623d03ad534dd1891 292 Gene3D G3DSA:2.40.100.10 85 288 4.5E-52 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_0635 f4ad8204d267e30623d03ad534dd1891 292 SMART SM00796 5 226 9.3E-74 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D PA257_0635 f4ad8204d267e30623d03ad534dd1891 292 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 220 4.6E-49 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D PA257_0635 f4ad8204d267e30623d03ad534dd1891 292 SUPERFAMILY SSF50891 92 248 3.22E-26 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_0635 f4ad8204d267e30623d03ad534dd1891 292 Gene3D G3DSA:3.30.1360.40 1 83 8.3E-12 T 12-10-2018 PA257_0635 f4ad8204d267e30623d03ad534dd1891 292 SUPERFAMILY SSF160467 6 96 1.28E-14 T 12-10-2018 PA257_3906 5b9acaab5a2549e9ac836d56d2624f4b 80 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 1.2E-28 T 12-10-2018 IPR010696 Protein of unknown function DUF1272 PA257_5576 ec05d4e6936aae96725f4ec385df6fea 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 2.3E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PA257_5576 ec05d4e6936aae96725f4ec385df6fea 324 Pfam PF00005 ABC transporter 23 180 8.5E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_5576 ec05d4e6936aae96725f4ec385df6fea 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 314 8.1E-23 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PA257_5576 ec05d4e6936aae96725f4ec385df6fea 324 Gene3D G3DSA:3.40.50.300 1 319 7.6E-93 T 12-10-2018 PA257_5576 ec05d4e6936aae96725f4ec385df6fea 324 SUPERFAMILY SSF52540 3 251 3.99E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5576 ec05d4e6936aae96725f4ec385df6fea 324 SMART SM00382 31 230 3.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5576 ec05d4e6936aae96725f4ec385df6fea 324 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4166 edcbd1adab4f8e96405e961fbc277879 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 2 136 1.2E-26 T 12-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 PA257_4166 edcbd1adab4f8e96405e961fbc277879 154 SUPERFAMILY SSF53254 2 136 2.91E-23 T 12-10-2018 IPR029033 Histidine phosphatase superfamily PA257_4166 edcbd1adab4f8e96405e961fbc277879 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 6.1E-14 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PA257_4166 edcbd1adab4f8e96405e961fbc277879 154 Gene3D G3DSA:3.40.50.1240 1 153 2.8E-34 T 12-10-2018 IPR029033 Histidine phosphatase superfamily PA257_4166 edcbd1adab4f8e96405e961fbc277879 154 SMART SM00855 2 110 3.4E-9 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 758 1.8E-55 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:3.40.50.300 344 544 1.3E-70 T 12-10-2018 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:3.40.50.300 550 762 2.5E-88 T 12-10-2018 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 842 2.9E-25 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 334 4.9E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 SUPERFAMILY SSF81923 4 155 1.96E-38 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 5.5E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 5.5E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 5.5E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 5.5E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:1.10.8.60 764 854 1.5E-27 T 12-10-2018 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:3.40.50.300 149 342 2.0E-73 T 12-10-2018 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 SUPERFAMILY SSF52540 546 852 1.67E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:1.10.1780.10 1 148 5.0E-32 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.2E-9 T 12-10-2018 IPR004176 Clp, N-terminal PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.1E-12 T 12-10-2018 IPR004176 Clp, N-terminal PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 SUPERFAMILY SSF52540 159 545 2.51E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 SMART SM00382 597 765 4.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 SMART SM00382 198 343 2.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5717 9bd3b37841e722ae71996bd433ec927a 854 SMART SM01086 764 853 1.4E-36 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_4663 e367871fa34b7fe67bb7d89aa11c933f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 4.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4663 e367871fa34b7fe67bb7d89aa11c933f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 4.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4663 e367871fa34b7fe67bb7d89aa11c933f 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 4.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4663 e367871fa34b7fe67bb7d89aa11c933f 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 3.3E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4663 e367871fa34b7fe67bb7d89aa11c933f 300 Gene3D G3DSA:3.40.190.290 98 297 1.4E-20 T 12-10-2018 PA257_4663 e367871fa34b7fe67bb7d89aa11c933f 300 SUPERFAMILY SSF46785 8 93 1.31E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4663 e367871fa34b7fe67bb7d89aa11c933f 300 SUPERFAMILY SSF53850 98 295 6.41E-31 T 12-10-2018 PA257_4663 e367871fa34b7fe67bb7d89aa11c933f 300 Pfam PF03466 LysR substrate binding domain 96 294 6.6E-34 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4663 e367871fa34b7fe67bb7d89aa11c933f 300 Gene3D G3DSA:1.10.10.10 8 96 3.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2212 28e930b1c2c8be6107b5a0fdfde098da 321 Pfam PF08907 Domain of unknown function (DUF1853) 17 300 8.9E-94 T 12-10-2018 IPR015003 Protein of unknown function DUF1853 PA257_2511 cdbbb1911e7b3316533c5b6d579b40f4 315 Pfam PF06834 TraU protein 36 303 3.0E-72 T 12-10-2018 IPR009649 TraU PA257_2511 cdbbb1911e7b3316533c5b6d579b40f4 315 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 29 313 5.2E-133 T 12-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 PA257_0075 61841e40a4f49f8cff558acf93d28826 306 SUPERFAMILY SSF46785 5 84 1.19E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0075 61841e40a4f49f8cff558acf93d28826 306 Gene3D G3DSA:1.10.10.10 3 91 1.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0075 61841e40a4f49f8cff558acf93d28826 306 Gene3D G3DSA:3.40.190.10 92 289 2.2E-67 T 12-10-2018 PA257_0075 61841e40a4f49f8cff558acf93d28826 306 SUPERFAMILY SSF53850 88 294 6.52E-52 T 12-10-2018 PA257_0075 61841e40a4f49f8cff558acf93d28826 306 Gene3D G3DSA:3.40.190.10 163 262 2.2E-67 T 12-10-2018 PA257_0075 61841e40a4f49f8cff558acf93d28826 306 Pfam PF03466 LysR substrate binding domain 88 291 4.9E-48 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0075 61841e40a4f49f8cff558acf93d28826 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5672 b9aba2efa6118c052db7ae2e0758ca45 424 Pfam PF00817 impB/mucB/samB family 11 153 8.0E-28 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PA257_5672 b9aba2efa6118c052db7ae2e0758ca45 424 Pfam PF13438 Domain of unknown function (DUF4113) 376 423 3.5E-15 T 12-10-2018 IPR025188 Domain of unknown function DUF4113 PA257_5672 b9aba2efa6118c052db7ae2e0758ca45 424 SUPERFAMILY SSF56672 6 240 3.2E-63 T 12-10-2018 PA257_5672 b9aba2efa6118c052db7ae2e0758ca45 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 245 354 1.3E-12 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PA257_5672 b9aba2efa6118c052db7ae2e0758ca45 424 Gene3D G3DSA:1.10.150.20 176 233 1.7E-8 T 12-10-2018 PA257_5672 b9aba2efa6118c052db7ae2e0758ca45 424 Gene3D G3DSA:3.30.70.270 8 158 1.1E-36 T 12-10-2018 PA257_5672 b9aba2efa6118c052db7ae2e0758ca45 424 Gene3D G3DSA:2.30.40.20 16 78 1.1E-36 T 12-10-2018 PA257_4017 97568aa2cfc8fd3960d1203c0cb259c0 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 19 236 9.8E-51 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 PA257_4017 97568aa2cfc8fd3960d1203c0cb259c0 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 34 211 1.2E-47 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 PA257_4017 97568aa2cfc8fd3960d1203c0cb259c0 244 PIRSF PIRSF000857 4 241 7.8E-81 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 PA257_4017 97568aa2cfc8fd3960d1203c0cb259c0 244 Gene3D G3DSA:3.40.50.620 5 226 4.0E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_4017 97568aa2cfc8fd3960d1203c0cb259c0 244 SUPERFAMILY SSF52402 9 199 1.37E-46 T 12-10-2018 PA257_4017 97568aa2cfc8fd3960d1203c0cb259c0 244 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 40 235 1.0E-86 T 12-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 PA257_4017 97568aa2cfc8fd3960d1203c0cb259c0 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 237 36.123 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 PA257_2444 16a1faeb45fc1e470d44be868463772a 267 SUPERFAMILY SSF51556 3 263 3.27E-76 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_2444 16a1faeb45fc1e470d44be868463772a 267 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 128 138 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PA257_2444 16a1faeb45fc1e470d44be868463772a 267 PIRSF PIRSF005902 1 266 2.6E-63 T 12-10-2018 IPR001130 TatD family GO:0016788 PA257_2444 16a1faeb45fc1e470d44be868463772a 267 Gene3D G3DSA:3.20.20.140 1 266 1.1E-92 T 12-10-2018 PA257_2444 16a1faeb45fc1e470d44be868463772a 267 Pfam PF01026 TatD related DNase 4 261 1.5E-60 T 12-10-2018 IPR001130 TatD family GO:0016788 PA257_2991 5bc98de1e7eea8f5809436acbe47e7f9 447 SUPERFAMILY SSF52172 15 179 3.42E-37 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2991 5bc98de1e7eea8f5809436acbe47e7f9 447 Gene3D G3DSA:3.40.50.2300 7 174 1.5E-36 T 12-10-2018 PA257_2991 5bc98de1e7eea8f5809436acbe47e7f9 447 Gene3D G3DSA:1.10.3210.10 183 376 7.5E-32 T 12-10-2018 PA257_2991 5bc98de1e7eea8f5809436acbe47e7f9 447 Pfam PF13487 HD domain 263 322 1.8E-17 T 12-10-2018 PA257_2991 5bc98de1e7eea8f5809436acbe47e7f9 447 SUPERFAMILY SSF109604 226 377 1.33E-11 T 12-10-2018 PA257_2991 5bc98de1e7eea8f5809436acbe47e7f9 447 SMART SM00448 15 127 3.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2991 5bc98de1e7eea8f5809436acbe47e7f9 447 Pfam PF00072 Response regulator receiver domain 17 126 8.2E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6105 473b1e209d94438ca642a055689074ff 186 Gene3D G3DSA:1.10.357.10 52 180 2.2E-29 T 12-10-2018 PA257_6105 473b1e209d94438ca642a055689074ff 186 Gene3D G3DSA:1.10.10.60 5 51 1.3E-18 T 12-10-2018 PA257_6105 473b1e209d94438ca642a055689074ff 186 SUPERFAMILY SSF48498 80 180 3.61E-21 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_6105 473b1e209d94438ca642a055689074ff 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_6105 473b1e209d94438ca642a055689074ff 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_6105 473b1e209d94438ca642a055689074ff 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 1.1E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_6105 473b1e209d94438ca642a055689074ff 186 SUPERFAMILY SSF46689 1 72 2.46E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5189 12cf50f9cd818e84e97ae57c7a259f70 542 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 28 290 1.6E-122 T 12-10-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB PA257_5189 12cf50f9cd818e84e97ae57c7a259f70 542 SUPERFAMILY SSF110849 37 159 2.54E-10 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PA257_1294 d8bfec742b88dc99323941db02980b16 227 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 3 224 2.9E-80 T 12-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 PA257_1294 d8bfec742b88dc99323941db02980b16 227 SUPERFAMILY SSF103501 4 224 6.28E-64 T 12-10-2018 IPR036197 NarG-like superfamily PA257_1294 d8bfec742b88dc99323941db02980b16 227 Pfam PF02665 Nitrate reductase gamma subunit 5 224 7.8E-77 T 12-10-2018 IPR023234 NarG-like domain PA257_1294 d8bfec742b88dc99323941db02980b16 227 Gene3D G3DSA:1.20.950.20 2 216 1.7E-74 T 12-10-2018 PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 507 8.4E-45 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 6.0E-24 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 Gene3D G3DSA:1.10.287.950 211 541 2.4E-76 T 12-10-2018 PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 4.1E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 4.1E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 4.1E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 4.1E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 SMART SM00304 212 264 1.4E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 SMART SM00304 265 317 29.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 SMART SM00283 279 540 6.3E-80 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_4174 26fbe89fb174ae6370685af0856ef7c3 541 SUPERFAMILY SSF58104 232 540 1.26E-76 T 12-10-2018 PA257_2146 3dc3607f7ba9aa2c07d8f9ddf152a2bf 372 SUPERFAMILY SSF51735 1 246 4.36E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2146 3dc3607f7ba9aa2c07d8f9ddf152a2bf 372 Gene3D G3DSA:2.60.120.10 251 368 1.7E-28 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_2146 3dc3607f7ba9aa2c07d8f9ddf152a2bf 372 Gene3D G3DSA:3.40.50.720 1 249 5.4E-83 T 12-10-2018 PA257_2146 3dc3607f7ba9aa2c07d8f9ddf152a2bf 372 SUPERFAMILY SSF51182 238 365 4.25E-21 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_2146 3dc3607f7ba9aa2c07d8f9ddf152a2bf 372 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 185 1.2E-17 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_1883 59864d58dae65208fceaa3f72a6578be 137 Gene3D G3DSA:3.10.180.10 7 135 1.0E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_1883 59864d58dae65208fceaa3f72a6578be 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 124 1.9E-19 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_1883 59864d58dae65208fceaa3f72a6578be 137 SUPERFAMILY SSF54593 12 130 4.16E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_0545 4ee9ba721d1293396a13e430b5b1023b 178 Pfam PF01584 CheW-like domain 38 169 7.0E-27 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_0545 4ee9ba721d1293396a13e430b5b1023b 178 SUPERFAMILY SSF50341 33 170 3.79E-28 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_0545 4ee9ba721d1293396a13e430b5b1023b 178 Gene3D G3DSA:2.30.30.40 39 157 2.8E-21 T 12-10-2018 PA257_0545 4ee9ba721d1293396a13e430b5b1023b 178 Gene3D G3DSA:2.40.50.180 55 121 2.8E-21 T 12-10-2018 PA257_0545 4ee9ba721d1293396a13e430b5b1023b 178 SMART SM00260 32 168 2.1E-29 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_1050 77e758ff46c6e504ef1f8d254f742ca3 352 SUPERFAMILY SSF51735 147 310 2.18E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1050 77e758ff46c6e504ef1f8d254f742ca3 352 SUPERFAMILY SSF50129 1 179 1.67E-53 T 12-10-2018 IPR011032 GroES-like superfamily PA257_1050 77e758ff46c6e504ef1f8d254f742ca3 352 Pfam PF00107 Zinc-binding dehydrogenase 182 305 6.5E-24 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_1050 77e758ff46c6e504ef1f8d254f742ca3 352 SMART SM00829 7 343 8.8E-7 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_1050 77e758ff46c6e504ef1f8d254f742ca3 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 141 1.1E-33 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_1050 77e758ff46c6e504ef1f8d254f742ca3 352 Gene3D G3DSA:3.40.50.720 159 291 3.0E-106 T 12-10-2018 PA257_1050 77e758ff46c6e504ef1f8d254f742ca3 352 Gene3D G3DSA:3.90.180.10 10 326 3.0E-106 T 12-10-2018 PA257_1050 77e758ff46c6e504ef1f8d254f742ca3 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PA257_4876 d2eaa45bef22ffff45e76f28edbc5fad 204 PRINTS PR00050 Cold shock protein signature 175 193 1.9E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_4876 d2eaa45bef22ffff45e76f28edbc5fad 204 PRINTS PR00050 Cold shock protein signature 140 155 1.9E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_4876 d2eaa45bef22ffff45e76f28edbc5fad 204 PRINTS PR00050 Cold shock protein signature 160 169 1.9E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_4876 d2eaa45bef22ffff45e76f28edbc5fad 204 SUPERFAMILY SSF50249 137 200 3.67E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_4876 d2eaa45bef22ffff45e76f28edbc5fad 204 Gene3D G3DSA:2.40.50.140 138 200 1.3E-25 T 12-10-2018 PA257_4876 d2eaa45bef22ffff45e76f28edbc5fad 204 ProSitePatterns PS00352 'Cold-shock' domain signature. 151 169 - T 12-10-2018 IPR019844 Cold-shock conserved site PA257_4876 d2eaa45bef22ffff45e76f28edbc5fad 204 SMART SM00357 139 202 6.5E-25 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 PA257_4876 d2eaa45bef22ffff45e76f28edbc5fad 204 Pfam PF00313 'Cold-shock' DNA-binding domain 139 200 1.6E-25 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_2145 9baa5ca293c405e250b1fe4c7a07ed55 146 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 87 134 1.2E-25 T 12-10-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 PA257_2145 9baa5ca293c405e250b1fe4c7a07ed55 146 Gene3D G3DSA:3.90.25.30 1 124 4.2E-33 T 12-10-2018 PA257_2145 9baa5ca293c405e250b1fe4c7a07ed55 146 Gene3D G3DSA:3.40.50.720 3 111 4.2E-33 T 12-10-2018 PA257_2145 9baa5ca293c405e250b1fe4c7a07ed55 146 Pfam PF02719 Polysaccharide biosynthesis protein 1 84 9.2E-20 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PA257_4846 9b754478a327508a0b43c366b3263fb7 180 SUPERFAMILY SSF48452 7 176 5.31E-60 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4846 9b754478a327508a0b43c366b3263fb7 180 Gene3D G3DSA:1.25.40.10 81 180 3.8E-34 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4846 9b754478a327508a0b43c366b3263fb7 180 Gene3D G3DSA:1.20.58.320 3 80 1.4E-23 T 12-10-2018 PA257_4846 9b754478a327508a0b43c366b3263fb7 180 Pfam PF06041 Bacterial protein of unknown function (DUF924) 9 177 1.9E-51 T 12-10-2018 IPR010323 Protein of unknown function DUF924 PA257_4547 2476316002f63fb0f816fed0beb7d424 334 Gene3D G3DSA:3.30.60.50 178 225 2.9E-97 T 12-10-2018 PA257_4547 2476316002f63fb0f816fed0beb7d424 334 Pfam PF02615 Malate/L-lactate dehydrogenase 5 329 3.7E-101 T 12-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 PA257_4547 2476316002f63fb0f816fed0beb7d424 334 SUPERFAMILY SSF89733 2 333 3.4E-101 T 12-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 PA257_4547 2476316002f63fb0f816fed0beb7d424 334 Gene3D G3DSA:1.10.1530.10 11 329 2.9E-97 T 12-10-2018 PA257_4547 2476316002f63fb0f816fed0beb7d424 334 Gene3D G3DSA:3.30.1370.60 62 302 2.9E-97 T 12-10-2018 PA257_5098 0fde941044abccac6426b129f76cb7d5 157 SUPERFAMILY SSF55961 10 139 3.47E-22 T 12-10-2018 PA257_5098 0fde941044abccac6426b129f76cb7d5 157 Gene3D G3DSA:3.30.530.20 9 148 1.1E-27 T 12-10-2018 IPR023393 START-like domain superfamily PA257_5098 0fde941044abccac6426b129f76cb7d5 157 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 18 139 1.7E-15 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like PA257_3572 68759c4117a7b7d8f7f0638fc5d908cf 401 SMART SM00155 108 135 0.0013 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_3572 68759c4117a7b7d8f7f0638fc5d908cf 401 SMART SM00155 278 305 2.0 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_3572 68759c4117a7b7d8f7f0638fc5d908cf 401 Pfam PF13091 PLD-like domain 206 330 6.4E-25 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PA257_3572 68759c4117a7b7d8f7f0638fc5d908cf 401 Pfam PF13091 PLD-like domain 24 140 3.4E-14 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PA257_3572 68759c4117a7b7d8f7f0638fc5d908cf 401 Gene3D G3DSA:3.30.870.10 185 353 5.0E-27 T 12-10-2018 PA257_3572 68759c4117a7b7d8f7f0638fc5d908cf 401 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 376 52.923 T 12-10-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 PA257_3572 68759c4117a7b7d8f7f0638fc5d908cf 401 SUPERFAMILY SSF56024 183 352 9.2E-40 T 12-10-2018 PA257_3572 68759c4117a7b7d8f7f0638fc5d908cf 401 SUPERFAMILY SSF56024 3 175 5.02E-42 T 12-10-2018 PA257_3572 68759c4117a7b7d8f7f0638fc5d908cf 401 Gene3D G3DSA:3.30.870.10 4 172 5.4E-37 T 12-10-2018 PA257_5383 667e0a904400068dc33060a7e4a1c4cc 326 Pfam PF01944 Stage II sporulation protein M 110 290 8.3E-36 T 12-10-2018 IPR002798 Stage II sporulation protein M-like PA257_2896 10abdb2737a7e3547d6dbebb73c00631 223 SMART SM00862 146 217 2.9E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_2896 10abdb2737a7e3547d6dbebb73c00631 223 Gene3D G3DSA:3.40.50.2300 1 121 1.7E-35 T 12-10-2018 PA257_2896 10abdb2737a7e3547d6dbebb73c00631 223 SMART SM00448 1 112 7.1E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2896 10abdb2737a7e3547d6dbebb73c00631 223 Gene3D G3DSA:1.10.10.10 123 220 3.5E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2896 10abdb2737a7e3547d6dbebb73c00631 223 SUPERFAMILY SSF52172 1 118 3.42E-36 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2896 10abdb2737a7e3547d6dbebb73c00631 223 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2896 10abdb2737a7e3547d6dbebb73c00631 223 SUPERFAMILY SSF46894 123 217 2.83E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_2896 10abdb2737a7e3547d6dbebb73c00631 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 3.7E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_2988 7bf62d70e947b8d98e627f171b9a9d31 200 Gene3D G3DSA:3.40.109.10 2 200 3.5E-88 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_2988 7bf62d70e947b8d98e627f171b9a9d31 200 Pfam PF00881 Nitroreductase family 9 177 2.1E-19 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 PA257_2988 7bf62d70e947b8d98e627f171b9a9d31 200 SUPERFAMILY SSF55469 5 199 8.38E-73 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_4316 7ed8cebcfcf7e41723596c86378b2c76 58 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 1.5E-17 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PA257_4316 7ed8cebcfcf7e41723596c86378b2c76 58 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 8.7E-22 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PA257_1938 d059711350a6241ac774e5238fea74b1 96 Gene3D G3DSA:3.40.30.10 1 87 3.1E-42 T 12-10-2018 PA257_1938 d059711350a6241ac774e5238fea74b1 96 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 8 79 1.2E-22 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type PA257_1938 d059711350a6241ac774e5238fea74b1 96 Pfam PF10262 Rdx family 8 80 2.0E-32 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type PA257_1938 d059711350a6241ac774e5238fea74b1 96 SUPERFAMILY SSF52833 6 89 3.35E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4317 eeb96d3f356537d13c0c0e1e57cdaab9 252 Pfam PF01578 Cytochrome C assembly protein 15 186 6.3E-26 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PA257_4317 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 64 84 4.7E-59 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4317 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 102 122 4.7E-59 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4317 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 47 64 4.7E-59 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4317 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 158 184 4.7E-59 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4317 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 206 230 4.7E-59 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4317 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 123 143 4.7E-59 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_4317 eeb96d3f356537d13c0c0e1e57cdaab9 252 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 47 230 2.1E-84 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PA257_3547 604a27e63aafb46647dd7eca0b1a58bd 202 Pfam PF06930 Protein of unknown function (DUF1282) 8 177 2.9E-20 T 12-10-2018 IPR009698 Protein of unknown function DUF1282 PA257_4074 8b970db150ffb5b89e62797058fed54b 123 Gene3D G3DSA:3.30.1460.10 1 123 8.0E-47 T 12-10-2018 PA257_4074 8b970db150ffb5b89e62797058fed54b 123 SUPERFAMILY SSF69635 2 121 3.45E-40 T 12-10-2018 PA257_4074 8b970db150ffb5b89e62797058fed54b 123 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 2.1E-47 T 12-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 PA257_0850 bed1dda5b58a3fb6c37a198a2dae8687 58 Gene3D G3DSA:3.30.1390.20 1 58 4.5E-23 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily PA257_0850 bed1dda5b58a3fb6c37a198a2dae8687 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.751 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0850 bed1dda5b58a3fb6c37a198a2dae8687 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 57 3.9E-20 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0850 bed1dda5b58a3fb6c37a198a2dae8687 58 PIRSF PIRSF002211 1 58 7.1E-24 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0850 bed1dda5b58a3fb6c37a198a2dae8687 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 52 1.2E-17 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PA257_0850 bed1dda5b58a3fb6c37a198a2dae8687 58 SUPERFAMILY SSF55129 1 57 5.89E-20 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily PA257_3670 4c67e5e95f1b9e2c49f1b29cf681bb74 407 SUPERFAMILY SSF53474 14 142 9.93E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3670 4c67e5e95f1b9e2c49f1b29cf681bb74 407 Gene3D G3DSA:3.40.50.1820 10 170 2.9E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3670 4c67e5e95f1b9e2c49f1b29cf681bb74 407 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 23 286 3.7E-75 T 12-10-2018 IPR018712 Domain of unknown function DUF2235 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 Pfam PF08264 Anticodon-binding domain of tRNA 671 823 1.3E-43 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 SUPERFAMILY SSF46589 883 947 9.94E-18 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 SUPERFAMILY SSF52374 1 638 2.92E-137 T 12-10-2018 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 947 1.6E-19 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 Gene3D G3DSA:3.90.740.10 241 311 1.9E-8 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 948 16.17 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 Gene3D G3DSA:3.40.50.620 328 552 5.7E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 628 1.4E-219 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 Gene3D G3DSA:1.10.730.10 574 816 1.2E-73 T 12-10-2018 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 Gene3D G3DSA:3.40.50.620 2 202 4.8E-64 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 930 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 SUPERFAMILY SSF47323 639 898 1.23E-70 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 1.1E-35 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 PRINTS PR00986 Valyl-tRNA synthetase signature 466 487 1.1E-35 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 PRINTS PR00986 Valyl-tRNA synthetase signature 366 379 1.1E-35 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 PRINTS PR00986 Valyl-tRNA synthetase signature 497 515 1.1E-35 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 1.1E-35 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 Gene3D G3DSA:1.10.287.380 876 948 9.5E-20 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 SUPERFAMILY SSF50677 188 362 2.35E-59 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PA257_1332 f721a52eaed6ef6725f9d9657fc9cfac 950 Gene3D G3DSA:3.90.740.10 203 240 2.6E-5 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PA257_4142 50e0f67a6a206e113478a94d53f320e5 345 Gene3D G3DSA:3.40.1090.10 1 104 7.9E-23 T 12-10-2018 PA257_4142 50e0f67a6a206e113478a94d53f320e5 345 Pfam PF01734 Patatin-like phospholipase 7 163 4.0E-16 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 PA257_4142 50e0f67a6a206e113478a94d53f320e5 345 SUPERFAMILY SSF52151 3 339 1.18E-49 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PA257_3222 942d207aa98cff337bbaffdf4526d4f6 286 SUPERFAMILY SSF51182 11 284 8.19E-84 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_3222 942d207aa98cff337bbaffdf4526d4f6 286 PIRSF PIRSF006232 4 286 2.8E-92 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 PA257_3222 942d207aa98cff337bbaffdf4526d4f6 286 Gene3D G3DSA:2.60.120.10 17 279 4.5E-82 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_3222 942d207aa98cff337bbaffdf4526d4f6 286 Pfam PF05726 Pirin C-terminal cupin domain 182 283 7.6E-30 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 PA257_3222 942d207aa98cff337bbaffdf4526d4f6 286 Pfam PF02678 Pirin 21 127 2.6E-34 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 PA257_3222 942d207aa98cff337bbaffdf4526d4f6 286 Gene3D G3DSA:2.60.120.10 149 252 4.5E-82 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_6709 c290256d756775f9b5f982bd7e8e6899 356 SUPERFAMILY SSF46689 292 341 7.17E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6709 c290256d756775f9b5f982bd7e8e6899 356 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 291 335 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_6709 c290256d756775f9b5f982bd7e8e6899 356 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 214 3.1E-36 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_6709 c290256d756775f9b5f982bd7e8e6899 356 Gene3D G3DSA:1.10.10.60 237 347 3.0E-24 T 12-10-2018 PA257_6709 c290256d756775f9b5f982bd7e8e6899 356 Pfam PF12833 Helix-turn-helix domain 264 340 3.9E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_6709 c290256d756775f9b5f982bd7e8e6899 356 SMART SM00342 257 339 5.5E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_6556 a9324c57adf80ac2d843be9dbee9a77f 432 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 4 432 5.8E-213 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 PA257_6556 a9324c57adf80ac2d843be9dbee9a77f 432 SUPERFAMILY SSF53633 3 283 6.84E-63 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_6556 a9324c57adf80ac2d843be9dbee9a77f 432 Gene3D G3DSA:3.40.1160.10 3 283 2.2E-86 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_6556 a9324c57adf80ac2d843be9dbee9a77f 432 Gene3D G3DSA:3.40.630.30 284 432 8.7E-38 T 12-10-2018 PA257_6556 a9324c57adf80ac2d843be9dbee9a77f 432 SUPERFAMILY SSF55729 253 409 1.2E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6556 a9324c57adf80ac2d843be9dbee9a77f 432 Pfam PF00696 Amino acid kinase family 25 259 1.0E-18 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PA257_6556 a9324c57adf80ac2d843be9dbee9a77f 432 PIRSF PIRSF000423 1 432 8.1E-193 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 PA257_6556 a9324c57adf80ac2d843be9dbee9a77f 432 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 432 222.198 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 PA257_6556 a9324c57adf80ac2d843be9dbee9a77f 432 Pfam PF00583 Acetyltransferase (GNAT) family 321 398 2.9E-9 T 12-10-2018 IPR000182 GNAT domain PA257_2642 ed30cb29ee768be120b58ef48dc85982 291 SUPERFAMILY SSF52540 1 266 6.82E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2642 ed30cb29ee768be120b58ef48dc85982 291 Gene3D G3DSA:3.40.50.300 1 273 1.2E-48 T 12-10-2018 PA257_2642 ed30cb29ee768be120b58ef48dc85982 291 Pfam PF13614 AAA domain 1 168 1.1E-25 T 12-10-2018 IPR025669 AAA domain PA257_5137 1ea179e8c66314a887b38ac97ec612ef 233 SUPERFAMILY SSF57863 84 142 2.62E-8 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger PA257_5137 1ea179e8c66314a887b38ac97ec612ef 233 Gene3D G3DSA:1.20.1440.120 78 232 7.6E-51 T 12-10-2018 PA257_5137 1ea179e8c66314a887b38ac97ec612ef 233 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 145 4.9E-18 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PA257_5137 1ea179e8c66314a887b38ac97ec612ef 233 Pfam PF02565 Recombination protein O C terminal 80 222 9.7E-23 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PA257_5137 1ea179e8c66314a887b38ac97ec612ef 233 Gene3D G3DSA:2.40.50.140 4 75 2.6E-21 T 12-10-2018 PA257_5137 1ea179e8c66314a887b38ac97ec612ef 233 Hamap MF_00201 DNA repair protein RecO [recO]. 3 228 19.491 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PA257_5137 1ea179e8c66314a887b38ac97ec612ef 233 SUPERFAMILY SSF50249 10 73 1.71E-11 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_5137 1ea179e8c66314a887b38ac97ec612ef 233 Pfam PF11967 Recombination protein O N terminal 7 73 2.3E-15 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal PA257_0646 81a96685202d77a5785adebb221e9e9e 601 SUPERFAMILY SSF47203 287 475 9.83E-48 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_0646 81a96685202d77a5785adebb221e9e9e 601 Gene3D G3DSA:2.40.110.10 161 286 1.0E-27 T 12-10-2018 PA257_0646 81a96685202d77a5785adebb221e9e9e 601 SUPERFAMILY SSF56645 38 277 7.33E-60 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_0646 81a96685202d77a5785adebb221e9e9e 601 Gene3D G3DSA:1.10.540.10 21 160 8.3E-17 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_0646 81a96685202d77a5785adebb221e9e9e 601 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 5.1E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_0646 81a96685202d77a5785adebb221e9e9e 601 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 592 1.8E-35 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PA257_0646 81a96685202d77a5785adebb221e9e9e 601 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 7.2E-11 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PA257_0646 81a96685202d77a5785adebb221e9e9e 601 Gene3D G3DSA:1.20.140.10 287 456 2.4E-41 T 12-10-2018 PA257_0646 81a96685202d77a5785adebb221e9e9e 601 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 2.7E-12 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_0646 81a96685202d77a5785adebb221e9e9e 601 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 451 8.2E-20 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_1347 c36f9129e389928474cf019f8a9a4ac2 620 Pfam PF13721 SecD export protein N-terminal TM region 2 104 3.7E-34 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain PA257_1347 c36f9129e389928474cf019f8a9a4ac2 620 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 619 46.699 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PA257_1347 c36f9129e389928474cf019f8a9a4ac2 620 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 124 606 5.9E-134 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PA257_1347 c36f9129e389928474cf019f8a9a4ac2 620 Gene3D G3DSA:3.30.70.3400 220 442 1.5E-44 T 12-10-2018 PA257_1347 c36f9129e389928474cf019f8a9a4ac2 620 Gene3D G3DSA:1.20.1640.10 447 616 1.6E-10 T 12-10-2018 PA257_1347 c36f9129e389928474cf019f8a9a4ac2 620 Pfam PF07549 SecD/SecF GG Motif 117 141 4.1E-6 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PA257_1347 c36f9129e389928474cf019f8a9a4ac2 620 Gene3D G3DSA:3.30.1360.200 281 437 1.5E-44 T 12-10-2018 PA257_1347 c36f9129e389928474cf019f8a9a4ac2 620 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 343 599 7.0E-70 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PA257_1347 c36f9129e389928474cf019f8a9a4ac2 620 SUPERFAMILY SSF82866 325 611 2.09E-42 T 12-10-2018 PA257_1347 c36f9129e389928474cf019f8a9a4ac2 620 Pfam PF02355 Protein export membrane protein 443 606 1.9E-17 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PA257_3651 eb6e9fabe71b7a42ba05f504d3770842 416 PIRSF PIRSF038800 1 407 8.3E-141 T 12-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 PA257_3651 eb6e9fabe71b7a42ba05f504d3770842 416 Gene3D G3DSA:3.40.640.10 41 303 1.2E-160 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_3651 eb6e9fabe71b7a42ba05f504d3770842 416 SUPERFAMILY SSF53383 3 400 7.21E-92 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3651 eb6e9fabe71b7a42ba05f504d3770842 416 Hamap MF_01970 Kynureninase [kynU]. 1 399 35.102 T 12-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 PA257_3651 eb6e9fabe71b7a42ba05f504d3770842 416 Pfam PF00266 Aminotransferase class-V 77 363 5.8E-16 T 12-10-2018 IPR000192 Aminotransferase class V domain PA257_3651 eb6e9fabe71b7a42ba05f504d3770842 416 Gene3D G3DSA:3.90.1150.10 10 399 1.2E-160 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_3651 eb6e9fabe71b7a42ba05f504d3770842 416 TIGRFAM TIGR01814 kynureninase: kynureninase 8 399 3.7E-103 T 12-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 PA257_0297 736c010e8c5c56df94bcdcc42ba1c38c 254 SUPERFAMILY SSF53098 72 192 1.29E-5 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_0297 736c010e8c5c56df94bcdcc42ba1c38c 254 Pfam PF13610 DDE domain 73 211 3.9E-50 T 12-10-2018 IPR032874 DDE domain PA257_4159 920d3041ebd657d9eda559d4a9dba81e 220 Gene3D G3DSA:1.20.1050.10 83 191 4.5E-90 T 12-10-2018 PA257_4159 920d3041ebd657d9eda559d4a9dba81e 220 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 192 2.0E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_4159 920d3041ebd657d9eda559d4a9dba81e 220 SUPERFAMILY SSF52833 1 83 4.94E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4159 920d3041ebd657d9eda559d4a9dba81e 220 Gene3D G3DSA:3.40.30.10 6 196 4.5E-90 T 12-10-2018 PA257_4159 920d3041ebd657d9eda559d4a9dba81e 220 SUPERFAMILY SSF47616 74 197 7.94E-34 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_4159 920d3041ebd657d9eda559d4a9dba81e 220 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 7.2E-17 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_0031 5385aa3ffa196a7f316a6852f6814a19 185 Pfam PF01300 Telomere recombination 13 184 4.8E-43 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 PA257_0031 5385aa3ffa196a7f316a6852f6814a19 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 183 38.39 T 12-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 PA257_0031 5385aa3ffa196a7f316a6852f6814a19 185 Gene3D G3DSA:3.90.870.10 3 183 4.7E-55 T 12-10-2018 PA257_0031 5385aa3ffa196a7f316a6852f6814a19 185 SUPERFAMILY SSF55821 7 184 1.46E-52 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PA257_0640 6cfa60e8080de5cfc950be9679f85bd1 401 Pfam PF00155 Aminotransferase class I and II 39 378 3.0E-51 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_0640 6cfa60e8080de5cfc950be9679f85bd1 401 Gene3D G3DSA:3.40.640.10 55 284 1.9E-128 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_0640 6cfa60e8080de5cfc950be9679f85bd1 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 17 378 1.3E-149 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 PA257_0640 6cfa60e8080de5cfc950be9679f85bd1 401 SUPERFAMILY SSF53383 6 385 1.71E-109 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_0640 6cfa60e8080de5cfc950be9679f85bd1 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 1 382 51.127 T 12-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 PA257_0640 6cfa60e8080de5cfc950be9679f85bd1 401 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 PA257_0640 6cfa60e8080de5cfc950be9679f85bd1 401 Gene3D G3DSA:3.90.1150.10 39 376 1.9E-128 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_5608 0b0f22b4457e926da839153699d001ff 141 SUPERFAMILY SSF55729 1 127 8.14E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_5608 0b0f22b4457e926da839153699d001ff 141 Gene3D G3DSA:3.40.630.30 1 137 2.3E-34 T 12-10-2018 PA257_5608 0b0f22b4457e926da839153699d001ff 141 Pfam PF00583 Acetyltransferase (GNAT) family 23 120 1.6E-11 T 12-10-2018 IPR000182 GNAT domain PA257_4982 cbd28221f67bcd10e8f6d4be752828a8 357 Gene3D G3DSA:3.10.180.10 7 161 6.2E-46 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4982 cbd28221f67bcd10e8f6d4be752828a8 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 10 149 1.9E-51 T 12-10-2018 PA257_4982 cbd28221f67bcd10e8f6d4be752828a8 357 PIRSF PIRSF009283 1 357 5.2E-121 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 PA257_4982 cbd28221f67bcd10e8f6d4be752828a8 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 166 277 1.4E-16 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_4982 cbd28221f67bcd10e8f6d4be752828a8 357 Gene3D G3DSA:3.10.180.10 162 357 6.5E-69 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4982 cbd28221f67bcd10e8f6d4be752828a8 357 SUPERFAMILY SSF54593 8 344 2.12E-80 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4982 cbd28221f67bcd10e8f6d4be752828a8 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 17 356 1.8E-124 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 PA257_2099 23e15558011eca0862235bef641eefc4 332 SUPERFAMILY SSF46785 87 163 6.89E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2099 23e15558011eca0862235bef641eefc4 332 SUPERFAMILY SSF46785 5 86 3.81E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2099 23e15558011eca0862235bef641eefc4 332 Gene3D G3DSA:1.10.10.10 4 85 1.2E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2099 23e15558011eca0862235bef641eefc4 332 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 8 174 1.2E-33 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PA257_2099 23e15558011eca0862235bef641eefc4 332 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 172 2.5E-49 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PA257_2099 23e15558011eca0862235bef641eefc4 332 Gene3D G3DSA:1.10.10.10 86 182 1.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4829 6bd1226b9733852e2b0d1edaf5fbbc5e 283 SUPERFAMILY SSF53901 23 156 2.46E-11 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4829 6bd1226b9733852e2b0d1edaf5fbbc5e 283 Gene3D G3DSA:3.40.47.10 25 199 3.3E-15 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3274 8ef167b4ce155a274e7fea57c671f21c 141 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 124 1.2E-25 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein PA257_3274 8ef167b4ce155a274e7fea57c671f21c 141 Pfam PF04965 Gene 25-like lysozyme 26 115 4.1E-18 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD PA257_3274 8ef167b4ce155a274e7fea57c671f21c 141 Gene3D G3DSA:3.10.450.40 6 127 6.6E-8 T 12-10-2018 PA257_3274 8ef167b4ce155a274e7fea57c671f21c 141 SUPERFAMILY SSF160719 27 129 7.19E-14 T 12-10-2018 PA257_4025 8c33c45ffcdf2dcf9b4c19818311994f 94 SUPERFAMILY SSF55729 7 91 3.77E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_4025 8c33c45ffcdf2dcf9b4c19818311994f 94 Pfam PF14542 GCN5-related N-acetyl-transferase 15 88 3.9E-23 T 12-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase PA257_4025 8c33c45ffcdf2dcf9b4c19818311994f 94 Gene3D G3DSA:3.40.630.30 1 93 1.4E-25 T 12-10-2018 PA257_3355 770a51ff13c014841b371319eb2523ea 710 Gene3D G3DSA:2.170.130.10 37 166 4.3E-23 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_3355 770a51ff13c014841b371319eb2523ea 710 Gene3D G3DSA:2.40.170.20 186 710 5.5E-85 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_3355 770a51ff13c014841b371319eb2523ea 710 Pfam PF00593 TonB dependent receptor 231 706 4.8E-48 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_3355 770a51ff13c014841b371319eb2523ea 710 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 161 1.2E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_3355 770a51ff13c014841b371319eb2523ea 710 SUPERFAMILY SSF56935 32 710 3.36E-110 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 Gene3D G3DSA:3.30.390.30 338 454 7.9E-44 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 SUPERFAMILY SSF51905 5 365 1.3E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.0E-70 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 3.0E-70 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 3.0E-70 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 3.0E-70 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 3.0E-70 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 3.0E-70 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 3.0E-70 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 3.0E-70 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 3.0E-70 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 2.0E-34 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 Gene3D G3DSA:3.50.50.60 7 322 4.9E-110 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 SUPERFAMILY SSF55424 336 451 2.75E-36 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 Gene3D G3DSA:3.50.50.60 146 262 4.9E-110 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 319 5.8E-65 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 1.4E-31 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 1.4E-31 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 1.4E-31 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-31 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 1.4E-31 T 12-10-2018 PA257_2557 9a63cfb91f9286dd2467270be1270ff2 455 PIRSF PIRSF000350 2 446 2.9E-88 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PA257_1063 5ce75f200debf08af5e5aab791095814 248 Gene3D G3DSA:2.60.40.10 151 248 1.5E-33 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_1063 5ce75f200debf08af5e5aab791095814 248 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 106 123 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site PA257_1063 5ce75f200debf08af5e5aab791095814 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 150 5.1E-41 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PA257_1063 5ce75f200debf08af5e5aab791095814 248 PRINTS PR00969 Pili chaperone signature 30 39 3.2E-29 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_1063 5ce75f200debf08af5e5aab791095814 248 PRINTS PR00969 Pili chaperone signature 79 100 3.2E-29 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_1063 5ce75f200debf08af5e5aab791095814 248 PRINTS PR00969 Pili chaperone signature 172 187 3.2E-29 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_1063 5ce75f200debf08af5e5aab791095814 248 PRINTS PR00969 Pili chaperone signature 131 146 3.2E-29 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_1063 5ce75f200debf08af5e5aab791095814 248 PRINTS PR00969 Pili chaperone signature 107 124 3.2E-29 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_1063 5ce75f200debf08af5e5aab791095814 248 SUPERFAMILY SSF49584 151 241 1.03E-17 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily PA257_1063 5ce75f200debf08af5e5aab791095814 248 SUPERFAMILY SSF49354 25 149 2.24E-39 T 12-10-2018 IPR008962 PapD-like superfamily PA257_1063 5ce75f200debf08af5e5aab791095814 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 177 240 1.4E-21 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal PA257_1063 5ce75f200debf08af5e5aab791095814 248 Gene3D G3DSA:2.60.40.10 31 150 2.9E-45 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3621 0c293a9b559c52fb07bdb51b20fc23c2 265 Pfam PF07286 Protein of unknown function (DUF1445) 117 259 4.5E-60 T 12-10-2018 IPR009906 D-glutamate cyclase PA257_3621 0c293a9b559c52fb07bdb51b20fc23c2 265 SUPERFAMILY SSF160920 10 259 6.02E-102 T 12-10-2018 IPR038021 Putative hydro-lyase PA257_3621 0c293a9b559c52fb07bdb51b20fc23c2 265 Gene3D G3DSA:3.40.1640.10 24 255 8.9E-85 T 12-10-2018 PA257_3621 0c293a9b559c52fb07bdb51b20fc23c2 265 PIRSF PIRSF029755 3 265 1.7E-114 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 PA257_3621 0c293a9b559c52fb07bdb51b20fc23c2 265 Hamap MF_01830 Putative hydro-lyase . 13 264 49.81 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 PA257_3621 0c293a9b559c52fb07bdb51b20fc23c2 265 Gene3D G3DSA:3.30.2040.10 127 239 8.9E-85 T 12-10-2018 PA257_1467 fea1796a5090b97aeaf1f2dcebcba951 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 392 8.7E-199 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 PA257_1467 fea1796a5090b97aeaf1f2dcebcba951 393 SUPERFAMILY SSF52440 3 112 1.73E-34 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_1467 fea1796a5090b97aeaf1f2dcebcba951 393 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 392 53.632 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 PA257_1467 fea1796a5090b97aeaf1f2dcebcba951 393 Pfam PF02222 ATP-grasp domain 123 295 1.0E-54 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PA257_1467 fea1796a5090b97aeaf1f2dcebcba951 393 Gene3D G3DSA:3.40.50.20 2 122 2.1E-54 T 12-10-2018 PA257_1467 fea1796a5090b97aeaf1f2dcebcba951 393 SUPERFAMILY SSF56059 120 386 3.33E-59 T 12-10-2018 PA257_1467 fea1796a5090b97aeaf1f2dcebcba951 393 Gene3D G3DSA:3.30.470.20 197 391 7.3E-62 T 12-10-2018 PA257_1467 fea1796a5090b97aeaf1f2dcebcba951 393 Gene3D G3DSA:3.30.1490.20 123 196 1.9E-33 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_1467 fea1796a5090b97aeaf1f2dcebcba951 393 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 81 1.7E-4 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_0456 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 Pfam PF02597 ThiS family 3 66 3.9E-17 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 PA257_0456 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 SUPERFAMILY SSF54285 2 65 5.5E-20 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PA257_0456 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 Gene3D G3DSA:3.10.20.30 1 66 7.3E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_0456 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 2.2E-24 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis PA257_6550 a2c380cc2f06f7c1a338757cb505ffcd 307 Pfam PF02016 LD-carboxypeptidase 18 299 2.5E-61 T 12-10-2018 IPR003507 Peptidase family S66 PA257_6550 a2c380cc2f06f7c1a338757cb505ffcd 307 Gene3D G3DSA:3.40.50.10740 1 170 5.7E-69 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal PA257_6550 a2c380cc2f06f7c1a338757cb505ffcd 307 SUPERFAMILY SSF141986 157 304 9.42E-33 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily PA257_6550 a2c380cc2f06f7c1a338757cb505ffcd 307 PIRSF PIRSF028757 13 307 4.1E-87 T 12-10-2018 IPR003507 Peptidase family S66 PA257_6550 a2c380cc2f06f7c1a338757cb505ffcd 307 Gene3D G3DSA:3.50.30.60 171 307 2.2E-43 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily PA257_6550 a2c380cc2f06f7c1a338757cb505ffcd 307 SUPERFAMILY SSF52317 14 143 1.37E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_1585 6846301b4aecd2a86a8fbb98a1f823c5 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 275 48.256 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PA257_1585 6846301b4aecd2a86a8fbb98a1f823c5 281 SUPERFAMILY SSF51569 3 277 1.01E-101 T 12-10-2018 PA257_1585 6846301b4aecd2a86a8fbb98a1f823c5 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 273 1.4E-114 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PA257_1585 6846301b4aecd2a86a8fbb98a1f823c5 281 Pfam PF00793 DAHP synthetase I family 9 273 2.3E-80 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PA257_1585 6846301b4aecd2a86a8fbb98a1f823c5 281 Gene3D G3DSA:3.20.20.70 1 281 1.4E-98 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1394 faf826fa6684f19bd2183b1a41f582a0 462 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 16 449 31.913 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PA257_1394 faf826fa6684f19bd2183b1a41f582a0 462 Pfam PF13742 OB-fold nucleic acid binding domain 19 111 1.9E-28 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 PA257_1394 faf826fa6684f19bd2183b1a41f582a0 462 Pfam PF02601 Exonuclease VII, large subunit 135 446 5.0E-100 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 PA257_1394 faf826fa6684f19bd2183b1a41f582a0 462 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 20 363 1.2E-131 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PA257_3121 73f488fcbf2e77ba6fa6c39626bf0d33 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 71 8.5E-19 T 12-10-2018 IPR010305 Protein of unknown function DUF903 PA257_3121 73f488fcbf2e77ba6fa6c39626bf0d33 73 Gene3D G3DSA:2.30.30.100 21 73 1.2E-17 T 12-10-2018 PA257_3121 73f488fcbf2e77ba6fa6c39626bf0d33 73 SUPERFAMILY SSF50182 22 72 2.62E-14 T 12-10-2018 IPR010920 LSM domain superfamily PA257_0251 edaa640062b6f1aa3f0372185af2d4b6 260 Gene3D G3DSA:3.40.225.10 17 256 3.9E-55 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PA257_0251 edaa640062b6f1aa3f0372185af2d4b6 260 SUPERFAMILY SSF53639 26 243 2.16E-66 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PA257_0251 edaa640062b6f1aa3f0372185af2d4b6 260 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 33 211 5.0E-38 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal PA257_0251 edaa640062b6f1aa3f0372185af2d4b6 260 SMART SM01007 33 211 2.8E-43 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal PA257_0273 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 Gene3D G3DSA:1.20.1720.10 14 227 7.9E-57 T 12-10-2018 PA257_0273 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 419 2.1E-75 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 PA257_0273 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 1.4E-12 T 12-10-2018 PA257_0273 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.4E-12 T 12-10-2018 PA257_0273 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 1.4E-12 T 12-10-2018 PA257_0273 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 1.4E-12 T 12-10-2018 PA257_0273 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 1.4E-12 T 12-10-2018 PA257_0273 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 SUPERFAMILY SSF103473 9 485 6.28E-67 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0273 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 Pfam PF07690 Major Facilitator Superfamily 18 410 3.8E-55 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0659 0c22eb0a87ea5a6e9f8fc615a0473325 104 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 26 100 1.5E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0659 0c22eb0a87ea5a6e9f8fc615a0473325 104 Gene3D G3DSA:1.10.760.10 23 104 4.7E-35 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0659 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 28 41 4.9E-29 T 12-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PA257_0659 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 92 102 4.9E-29 T 12-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PA257_0659 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 66 79 4.9E-29 T 12-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PA257_0659 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 81 91 4.9E-29 T 12-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PA257_0659 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 43 56 4.9E-29 T 12-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PA257_0659 0c22eb0a87ea5a6e9f8fc615a0473325 104 SUPERFAMILY SSF46626 25 103 2.22E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_2201 c304307a554f0b55ef0e2b8f606ae9d5 174 Pfam PF04612 Type II secretion system (T2SS), protein M 18 171 8.8E-45 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 PA257_2201 c304307a554f0b55ef0e2b8f606ae9d5 174 SUPERFAMILY SSF103054 99 171 5.1E-15 T 12-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily PA257_2201 c304307a554f0b55ef0e2b8f606ae9d5 174 Gene3D G3DSA:3.30.1360.100 98 174 5.0E-14 T 12-10-2018 PA257_2201 c304307a554f0b55ef0e2b8f606ae9d5 174 PIRSF PIRSF006291 15 174 1.3E-26 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 PA257_6310 5b724441711efbf063b26ceb08a3da40 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 2.1E-14 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_6310 5b724441711efbf063b26ceb08a3da40 600 SUPERFAMILY SSF47203 289 474 6.93E-40 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_6310 5b724441711efbf063b26ceb08a3da40 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 451 1.5E-17 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_6310 5b724441711efbf063b26ceb08a3da40 600 Gene3D G3DSA:1.20.140.10 290 460 4.0E-42 T 12-10-2018 PA257_6310 5b724441711efbf063b26ceb08a3da40 600 SUPERFAMILY SSF56645 36 281 4.58E-51 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_6310 5b724441711efbf063b26ceb08a3da40 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 7 34 3.6E-8 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PA257_6310 5b724441711efbf063b26ceb08a3da40 600 Gene3D G3DSA:2.40.110.10 160 289 2.1E-25 T 12-10-2018 PA257_6310 5b724441711efbf063b26ceb08a3da40 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 156 3.0E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_6310 5b724441711efbf063b26ceb08a3da40 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 471 595 3.9E-30 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PA257_6310 5b724441711efbf063b26ceb08a3da40 600 Gene3D G3DSA:1.10.540.10 12 158 1.6E-12 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_2684 1322b57b6cddfed06318e13c48d8e8cd 130 SUPERFAMILY SSF53335 19 116 1.27E-13 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2684 1322b57b6cddfed06318e13c48d8e8cd 130 Pfam PF00145 C-5 cytosine-specific DNA methylase 55 116 4.4E-8 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PA257_0067 b6207c8750a56bfebf0d7e63b9d7dab5 127 SMART SM00530 6 61 3.3E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_0067 b6207c8750a56bfebf0d7e63b9d7dab5 127 Gene3D G3DSA:1.10.260.40 1 75 2.4E-13 T 12-10-2018 PA257_0067 b6207c8750a56bfebf0d7e63b9d7dab5 127 Pfam PF01381 Helix-turn-helix 9 61 3.1E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_0067 b6207c8750a56bfebf0d7e63b9d7dab5 127 SUPERFAMILY SSF47413 1 65 1.75E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_3045 8916826e5b9a236553662b1abcef8bf9 499 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 475 5.0E-129 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_3045 8916826e5b9a236553662b1abcef8bf9 499 Gene3D G3DSA:1.20.1600.10 55 476 4.2E-134 T 12-10-2018 PA257_3045 8916826e5b9a236553662b1abcef8bf9 499 Pfam PF02321 Outer membrane efflux protein 73 266 1.1E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_3045 8916826e5b9a236553662b1abcef8bf9 499 Pfam PF02321 Outer membrane efflux protein 292 473 1.8E-30 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_3045 8916826e5b9a236553662b1abcef8bf9 499 SUPERFAMILY SSF56954 2 478 9.29E-119 T 12-10-2018 PA257_3045 8916826e5b9a236553662b1abcef8bf9 499 Gene3D G3DSA:2.20.200.10 102 364 4.2E-134 T 12-10-2018 PA257_6173 f7f34860992e2d62aa76d25617070ce6 340 Pfam PF16220 Domain of unknown function (DUF4880) 33 74 3.9E-12 T 12-10-2018 IPR032623 FecR, N-terminal PA257_6173 f7f34860992e2d62aa76d25617070ce6 340 PIRSF PIRSF018266 21 340 2.1E-96 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_6173 f7f34860992e2d62aa76d25617070ce6 340 Pfam PF04773 FecR protein 131 226 1.8E-20 T 12-10-2018 IPR006860 FecR protein PA257_6173 f7f34860992e2d62aa76d25617070ce6 340 Gene3D G3DSA:2.60.120.1440 126 263 5.2E-18 T 12-10-2018 PA257_3815 c3ac1cd244ad59aa5a1a1d05d09c23c8 760 SUPERFAMILY SSF82784 5 131 1.19E-20 T 12-10-2018 IPR036102 OsmC/Ohr superfamily PA257_3815 c3ac1cd244ad59aa5a1a1d05d09c23c8 760 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 6 731 0.0 T 12-10-2018 IPR019938 YcaO domain protein PA257_3815 c3ac1cd244ad59aa5a1a1d05d09c23c8 760 Pfam PF02566 OsmC-like protein 36 130 6.1E-10 T 12-10-2018 IPR003718 OsmC/Ohr family PA257_3815 c3ac1cd244ad59aa5a1a1d05d09c23c8 760 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 209 544 1.9E-70 T 12-10-2018 IPR003776 YcaO-like domain PA257_3815 c3ac1cd244ad59aa5a1a1d05d09c23c8 760 Gene3D G3DSA:3.30.300.20 4 132 2.0E-15 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_3815 c3ac1cd244ad59aa5a1a1d05d09c23c8 760 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 163 555 8.3E-95 T 12-10-2018 IPR003776 YcaO-like domain PA257_0436 3676a90935502f32e56ff01e00efaba6 577 SUPERFAMILY SSF56235 34 564 1.12E-147 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_0436 3676a90935502f32e56ff01e00efaba6 577 Gene3D G3DSA:3.60.20.40 378 564 2.3E-53 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 153 8.0E-58 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 267 8.0E-58 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 8.0E-58 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 466 483 8.0E-58 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 443 458 8.0E-58 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 282 301 8.0E-58 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 8.0E-58 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 61 86 8.0E-58 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 153 172 8.0E-58 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 Gene3D G3DSA:1.10.246.130 267 375 5.9E-25 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 Pfam PF01019 Gamma-glutamyltranspeptidase 54 561 8.9E-159 T 12-10-2018 PA257_0436 3676a90935502f32e56ff01e00efaba6 577 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 41 559 7.9E-109 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 PA257_0780 8453f9d77057971b2d66742ff82cc2e6 209 Pfam PF00182 Chitinase class I 101 167 2.0E-4 T 12-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 PA257_0780 8453f9d77057971b2d66742ff82cc2e6 209 SUPERFAMILY SSF53955 2 208 1.32E-45 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_0780 8453f9d77057971b2d66742ff82cc2e6 209 Gene3D G3DSA:1.10.530.70 19 208 1.1E-20 T 12-10-2018 PA257_3098 0f8f04acaa73c2c26ac8629b80720935 256 SUPERFAMILY SSF52833 96 253 8.25E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_3098 0f8f04acaa73c2c26ac8629b80720935 256 Gene3D G3DSA:3.40.30.10 112 255 6.1E-41 T 12-10-2018 PA257_3098 0f8f04acaa73c2c26ac8629b80720935 256 Gene3D G3DSA:3.10.450.70 28 97 1.1E-28 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 PA257_3098 0f8f04acaa73c2c26ac8629b80720935 256 Pfam PF13098 Thioredoxin-like domain 123 253 5.7E-16 T 12-10-2018 IPR012336 Thioredoxin-like fold PA257_3098 0f8f04acaa73c2c26ac8629b80720935 256 SUPERFAMILY SSF54423 27 86 3.92E-21 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 PA257_6509 77f8d21b2befdd73a7a55488dba6940f 367 Pfam PF00589 Phage integrase family 173 344 8.5E-15 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_6509 77f8d21b2befdd73a7a55488dba6940f 367 SUPERFAMILY SSF56349 57 346 1.68E-48 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_6509 77f8d21b2befdd73a7a55488dba6940f 367 Gene3D G3DSA:1.10.443.10 171 352 5.4E-14 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_6509 77f8d21b2befdd73a7a55488dba6940f 367 Gene3D G3DSA:3.30.160.390 1 57 2.4E-10 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily PA257_6509 77f8d21b2befdd73a7a55488dba6940f 367 Gene3D G3DSA:1.10.150.130 58 163 7.8E-24 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_4498 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 4 149 42.239 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 PA257_4498 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 Pfam PF03692 Putative zinc- or iron-chelating domain 26 93 1.5E-9 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein PA257_4498 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 PIRSF PIRSF006173 1 149 9.0E-67 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 PA257_5890 89e6394f85bed0c70c6631416d5d5bfc 335 PIRSF PIRSF002825 12 334 9.3E-83 T 12-10-2018 IPR026045 Ferric binding protein PA257_5890 89e6394f85bed0c70c6631416d5d5bfc 335 Gene3D G3DSA:3.40.190.10 32 304 1.2E-100 T 12-10-2018 PA257_5890 89e6394f85bed0c70c6631416d5d5bfc 335 SUPERFAMILY SSF53850 27 323 1.34E-72 T 12-10-2018 PA257_5890 89e6394f85bed0c70c6631416d5d5bfc 335 Gene3D G3DSA:3.40.190.10 127 315 1.2E-100 T 12-10-2018 PA257_5890 89e6394f85bed0c70c6631416d5d5bfc 335 Pfam PF13343 Bacterial extracellular solute-binding protein 81 313 1.2E-27 T 12-10-2018 PA257_0654 88acb75011eb20b6b5c1992deb7304fa 147 Gene3D G3DSA:1.10.10.10 1 53 1.8E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0654 88acb75011eb20b6b5c1992deb7304fa 147 Gene3D G3DSA:3.30.70.3460 65 144 7.9E-15 T 12-10-2018 PA257_0579 6ea532414df6139429e1b83a4b4466e6 479 Pfam PF01979 Amidohydrolase family 50 436 1.8E-28 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_0579 6ea532414df6139429e1b83a4b4466e6 479 Gene3D G3DSA:2.30.40.10 3 463 9.8E-191 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_0579 6ea532414df6139429e1b83a4b4466e6 479 SUPERFAMILY SSF51556 54 383 8.85E-109 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_0579 6ea532414df6139429e1b83a4b4466e6 479 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 455 4.6E-176 T 12-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 PA257_0579 6ea532414df6139429e1b83a4b4466e6 479 SUPERFAMILY SSF51338 1 455 9.02E-34 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_0579 6ea532414df6139429e1b83a4b4466e6 479 Gene3D G3DSA:3.20.20.140 54 424 9.8E-191 T 12-10-2018 PA257_0680 998679d9cf9b71f06feddcb534caeb48 202 SUPERFAMILY SSF140478 26 182 8.76E-54 T 12-10-2018 IPR023353 LemA-like domain superfamily PA257_0680 998679d9cf9b71f06feddcb534caeb48 202 Gene3D G3DSA:1.20.1440.20 18 195 4.1E-62 T 12-10-2018 IPR023353 LemA-like domain superfamily PA257_0680 998679d9cf9b71f06feddcb534caeb48 202 Pfam PF04011 LemA family 12 195 2.9E-64 T 12-10-2018 IPR007156 LemA PA257_0845 c49560fbcdfe1b97e703166a2d335bfb 96 Gene3D G3DSA:4.10.830.10 36 96 2.4E-22 T 12-10-2018 PA257_0845 c49560fbcdfe1b97e703166a2d335bfb 96 Pfam PF00253 Ribosomal protein S14p/S29e 43 95 1.1E-24 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0845 c49560fbcdfe1b97e703166a2d335bfb 96 SUPERFAMILY SSF57716 1 96 4.99E-36 T 12-10-2018 PA257_0845 c49560fbcdfe1b97e703166a2d335bfb 96 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 96 23.072 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid PA257_0845 c49560fbcdfe1b97e703166a2d335bfb 96 ProSitePatterns PS00527 Ribosomal protein S14 signature. 58 80 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_5309 ac44ac68bf35fc585ba8c7ebb644663e 615 Pfam PF10102 Domain of unknown function (DUF2341) 71 154 2.4E-22 T 12-10-2018 IPR018765 Domain of unknown function DUF2341 PA257_5309 ac44ac68bf35fc585ba8c7ebb644663e 615 Gene3D G3DSA:2.60.120.200 191 370 8.5E-19 T 12-10-2018 PA257_5309 ac44ac68bf35fc585ba8c7ebb644663e 615 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 197 342 1.2E-13 T 12-10-2018 PA257_5309 ac44ac68bf35fc585ba8c7ebb644663e 615 SUPERFAMILY SSF49899 135 344 3.91E-23 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PA257_5309 ac44ac68bf35fc585ba8c7ebb644663e 615 Pfam PF01618 MotA/TolQ/ExbB proton channel family 468 581 7.1E-27 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel PA257_5309 ac44ac68bf35fc585ba8c7ebb644663e 615 SMART SM00560 201 344 0.0064 T 12-10-2018 IPR006558 LamG-like jellyroll fold PA257_3471 f3a5f5b577466ec7eacb7cb802978021 469 SUPERFAMILY SSF51735 10 146 2.85E-6 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3471 f3a5f5b577466ec7eacb7cb802978021 469 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 11 152 1.4E-28 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 PA257_3471 f3a5f5b577466ec7eacb7cb802978021 469 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 156 436 7.0E-22 T 12-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 PA257_3471 f3a5f5b577466ec7eacb7cb802978021 469 Gene3D G3DSA:3.30.360.30 158 466 2.8E-173 T 12-10-2018 IPR023181 Homospermidine synthase-like, C-terminal KEGG: 00960+2.5.1.44 PA257_3471 f3a5f5b577466ec7eacb7cb802978021 469 Gene3D G3DSA:3.40.50.720 11 422 2.8E-173 T 12-10-2018 PA257_6631 77d78973ad29d53205c6697ae6098390 108 SUPERFAMILY SSF55387 1 103 1.74E-30 T 12-10-2018 PA257_6631 77d78973ad29d53205c6697ae6098390 108 Pfam PF01491 Frataxin-like domain 1 102 1.7E-22 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_6631 77d78973ad29d53205c6697ae6098390 108 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 2.9E-34 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_6631 77d78973ad29d53205c6697ae6098390 108 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 12-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_6631 77d78973ad29d53205c6697ae6098390 108 Gene3D G3DSA:3.30.920.10 1 106 2.5E-34 T 12-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_6631 77d78973ad29d53205c6697ae6098390 108 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 105 24.929 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_6631 77d78973ad29d53205c6697ae6098390 108 SMART SM01219 1 106 1.1E-46 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_2466 79180de09ce3731fcb434ffa0e1b8c7f 249 Pfam PF01925 Sulfite exporter TauE/SafE 8 243 1.8E-46 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PA257_5319 00c57c0b93f49e0af8647f900260ff91 197 Pfam PF04612 Type II secretion system (T2SS), protein M 24 190 1.8E-47 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 PA257_5366 5f7050c2184885fc8f7102c6bb3d54a0 303 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 12 300 8.6E-64 T 12-10-2018 IPR017592 Pilus assembly, Flp-type CpaB PA257_5366 5f7050c2184885fc8f7102c6bb3d54a0 303 SMART SM00858 56 116 1.6E-8 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PA257_5366 5f7050c2184885fc8f7102c6bb3d54a0 303 Pfam PF08666 SAF domain 57 116 1.3E-7 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PA257_5366 5f7050c2184885fc8f7102c6bb3d54a0 303 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 120 234 6.0E-30 T 12-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain PA257_5517 4cb399af2ea13d89b839dbb2b812cb0c 211 Gene3D G3DSA:3.40.190.10 3 196 4.0E-67 T 12-10-2018 PA257_5517 4cb399af2ea13d89b839dbb2b812cb0c 211 Gene3D G3DSA:3.40.190.10 93 174 4.0E-67 T 12-10-2018 PA257_5517 4cb399af2ea13d89b839dbb2b812cb0c 211 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 182 6.1E-53 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PA257_5517 4cb399af2ea13d89b839dbb2b812cb0c 211 Pfam PF01634 ATP phosphoribosyltransferase 51 202 1.5E-45 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PA257_5517 4cb399af2ea13d89b839dbb2b812cb0c 211 SUPERFAMILY SSF53850 1 206 1.87E-63 T 12-10-2018 PA257_5517 4cb399af2ea13d89b839dbb2b812cb0c 211 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 206 56.773 T 12-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 PA257_5517 4cb399af2ea13d89b839dbb2b812cb0c 211 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 SUPERFAMILY SSF56634 21 551 1.11E-221 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 PIRSF PIRSF038927 1 707 0.0 T 12-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 Pfam PF06628 Catalase-related immune-responsive 461 524 3.0E-20 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 Gene3D G3DSA:2.40.180.10 1 455 9.1E-213 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 ProSitePatterns PS00438 Catalase proximal active site signature. 79 95 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 Gene3D G3DSA:3.40.50.880 553 706 1.4E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 SMART SM01060 43 431 1.3E-274 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 Pfam PF01965 DJ-1/PfpI family 558 665 1.0E-11 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 Gene3D G3DSA:1.20.1370.20 458 552 1.1E-32 T 12-10-2018 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 SUPERFAMILY SSF52317 555 675 7.2E-20 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 373 381 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 PRINTS PR00067 Catalase signature 360 386 7.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 PRINTS PR00067 Catalase signature 56 79 7.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 PRINTS PR00067 Catalase signature 159 177 7.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 PRINTS PR00067 Catalase signature 328 355 7.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 PRINTS PR00067 Catalase signature 140 157 7.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 PRINTS PR00067 Catalase signature 119 137 7.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3581 f6de1e9ac4accb6f4775e78d30d6313a 709 Pfam PF00199 Catalase 44 428 1.7E-179 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_1035 37e9c0b8da58347af8192764b30b1c27 195 SUPERFAMILY SSF48613 7 191 9.39E-42 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_1035 37e9c0b8da58347af8192764b30b1c27 195 Gene3D G3DSA:1.20.910.10 2 193 9.1E-39 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_1035 37e9c0b8da58347af8192764b30b1c27 195 Pfam PF01126 Heme oxygenase 9 192 4.0E-34 T 12-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 SUPERFAMILY SSF51621 4 339 4.19E-91 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 PRINTS PR01050 Pyruvate kinase family signature 62 78 8.9E-61 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 PRINTS PR01050 Pyruvate kinase family signature 310 326 8.9E-61 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 PRINTS PR01050 Pyruvate kinase family signature 291 309 8.9E-61 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 PRINTS PR01050 Pyruvate kinase family signature 241 265 8.9E-61 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 PRINTS PR01050 Pyruvate kinase family signature 187 201 8.9E-61 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 PRINTS PR01050 Pyruvate kinase family signature 214 240 8.9E-61 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 PRINTS PR01050 Pyruvate kinase family signature 266 290 8.9E-61 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 Gene3D G3DSA:2.40.33.10 73 169 7.8E-163 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 3.9E-27 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 Pfam PF00224 Pyruvate kinase, barrel domain 5 335 5.5E-111 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 Gene3D G3DSA:3.20.20.60 5 332 7.8E-163 T 12-10-2018 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 SUPERFAMILY SSF50800 73 168 8.9E-26 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 SUPERFAMILY SSF52935 320 470 1.2E-37 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 470 3.9E-150 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_4295 4240157b72c00596dfafccf9f44f5a03 477 Gene3D G3DSA:3.40.1380.20 333 466 7.8E-163 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PA257_6640 2cf5716545e5dbd0ae31cdde2e3deaa8 304 Gene3D G3DSA:2.60.40.1090 156 303 1.9E-23 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 PA257_6640 2cf5716545e5dbd0ae31cdde2e3deaa8 304 Pfam PF00419 Fimbrial protein 159 304 1.3E-13 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PA257_6640 2cf5716545e5dbd0ae31cdde2e3deaa8 304 SUPERFAMILY SSF49401 168 304 2.54E-20 T 12-10-2018 IPR008966 Adhesion domain superfamily PA257_1197 7322230a537d8670c49c722ecfa16692 278 Pfam PF00106 short chain dehydrogenase 14 202 1.7E-57 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1197 7322230a537d8670c49c722ecfa16692 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 2.2E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1197 7322230a537d8670c49c722ecfa16692 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.2E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1197 7322230a537d8670c49c722ecfa16692 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.2E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1197 7322230a537d8670c49c722ecfa16692 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.2E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1197 7322230a537d8670c49c722ecfa16692 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.2E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1197 7322230a537d8670c49c722ecfa16692 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 6.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1197 7322230a537d8670c49c722ecfa16692 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1197 7322230a537d8670c49c722ecfa16692 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 6.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1197 7322230a537d8670c49c722ecfa16692 278 SUPERFAMILY SSF51735 11 268 5.72E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1197 7322230a537d8670c49c722ecfa16692 278 Gene3D G3DSA:3.40.50.720 2 272 3.8E-73 T 12-10-2018 PA257_1197 7322230a537d8670c49c722ecfa16692 278 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 193 2.1E-4 T 12-10-2018 PA257_1197 7322230a537d8670c49c722ecfa16692 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 SUPERFAMILY SSF52058 12 185 1.7E-30 T 12-10-2018 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 Gene3D G3DSA:1.10.510.10 308 442 9.1E-12 T 12-10-2018 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 SMART SM00369 104 126 16.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 SMART SM00369 128 148 70.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 SMART SM00369 37 58 4.7 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 SUPERFAMILY SSF56112 199 433 6.2E-22 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 SMART SM00364 128 144 290.0 T 12-10-2018 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 SMART SM00364 35 54 55.0 T 12-10-2018 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 SMART SM00364 103 122 6.9 T 12-10-2018 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 SMART SM00364 148 167 360.0 T 12-10-2018 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 SMART SM00364 171 190 120.0 T 12-10-2018 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 Gene3D G3DSA:3.30.200.20 193 276 4.4E-6 T 12-10-2018 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 Pfam PF07714 Protein tyrosine kinase 204 365 2.6E-10 T 12-10-2018 IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain GO:0004672|GO:0006468 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 209 235 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 Gene3D G3DSA:3.80.10.10 4 101 3.3E-16 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily PA257_3071 c9f617b89134170a1fe2bbda8bebbbcb 446 Gene3D G3DSA:3.80.10.10 102 190 2.9E-14 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily PA257_4566 3484527ed14ca3314ca63b79cefa846a 260 SMART SM00342 166 248 3.8E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4566 3484527ed14ca3314ca63b79cefa846a 260 Gene3D G3DSA:2.60.120.10 4 96 1.7E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4566 3484527ed14ca3314ca63b79cefa846a 260 Pfam PF12833 Helix-turn-helix domain 173 248 3.1E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4566 3484527ed14ca3314ca63b79cefa846a 260 SUPERFAMILY SSF51182 6 181 1.96E-21 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4566 3484527ed14ca3314ca63b79cefa846a 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 217 232 5.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4566 3484527ed14ca3314ca63b79cefa846a 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 248 5.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_4566 3484527ed14ca3314ca63b79cefa846a 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 203 244 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_4566 3484527ed14ca3314ca63b79cefa846a 260 Gene3D G3DSA:1.10.10.60 150 252 7.8E-25 T 12-10-2018 PA257_4566 3484527ed14ca3314ca63b79cefa846a 260 Pfam PF02311 AraC-like ligand binding domain 12 114 2.8E-9 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_4566 3484527ed14ca3314ca63b79cefa846a 260 SUPERFAMILY SSF46689 203 248 1.7E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4515 b39c0c2bb6b0d02a6e6823ad06ef91af 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4515 b39c0c2bb6b0d02a6e6823ad06ef91af 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4515 b39c0c2bb6b0d02a6e6823ad06ef91af 186 SUPERFAMILY SSF46689 2 81 1.8E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4515 b39c0c2bb6b0d02a6e6823ad06ef91af 186 Gene3D G3DSA:1.10.357.10 4 182 3.1E-34 T 12-10-2018 PA257_4515 b39c0c2bb6b0d02a6e6823ad06ef91af 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.50.50.60 110 246 5.7E-93 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PIRSF PIRSF037149 1 815 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.30.413.10 636 805 1.9E-34 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 283 3.2E-58 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.8E-13 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 4.8E-13 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.8E-13 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.8E-13 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 SUPERFAMILY SSF56014 634 800 3.27E-50 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 625 1.4E-14 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 SUPERFAMILY SSF55124 522 642 4.91E-25 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 798 1.1E-286 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.50.50.60 7 281 5.7E-93 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.90.480.10 571 635 2.3E-5 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 1.8E-7 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 1.8E-7 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.30.390.30 318 398 2.5E-6 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 SUPERFAMILY SSF51905 2 306 7.07E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 8.9E-20 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.9E-20 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 8.9E-20 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 8.9E-20 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 8.9E-20 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 7.7E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 488 538 3.6E-15 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:1.10.10.1100 422 475 2.5E-9 T 12-10-2018 PA257_3990 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 772 4.9E-27 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_0741 2af24579d72d3b6e76135971ed9675e6 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 7 261 2.5E-64 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PA257_0741 2af24579d72d3b6e76135971ed9675e6 268 Gene3D G3DSA:1.10.8.100 199 264 2.3E-26 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 PA257_0741 2af24579d72d3b6e76135971ed9675e6 268 Gene3D G3DSA:3.40.50.150 1 198 2.6E-68 T 12-10-2018 PA257_0741 2af24579d72d3b6e76135971ed9675e6 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 262 58.021 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PA257_0741 2af24579d72d3b6e76135971ed9675e6 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 66 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 PA257_0741 2af24579d72d3b6e76135971ed9675e6 268 SUPERFAMILY SSF53335 7 264 1.41E-79 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0741 2af24579d72d3b6e76135971ed9675e6 268 SMART SM00650 23 195 4.0E-88 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PA257_0741 2af24579d72d3b6e76135971ed9675e6 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 7 261 2.1E-83 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 Gene3D G3DSA:1.10.10.10 568 627 1.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6079 ee71afcab25e2046a550870a7afeabef 641 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.0E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.0E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.0E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.0E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 158 4.1E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 Pfam PF09106 Elongation factor SelB, winged helix 442 497 3.3E-15 T 12-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 SUPERFAMILY SSF46785 504 566 5.27E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6079 ee71afcab25e2046a550870a7afeabef 641 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site PA257_6079 ee71afcab25e2046a550870a7afeabef 641 Pfam PF00009 Elongation factor Tu GTP binding domain 2 161 5.1E-31 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 Pfam PF09107 Elongation factor SelB, winged helix 583 625 2.0E-18 T 12-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 627 2.1E-145 T 12-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 Gene3D G3DSA:2.40.30.10 174 289 3.3E-23 T 12-10-2018 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 SUPERFAMILY SSF50447 172 261 1.04E-17 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_6079 ee71afcab25e2046a550870a7afeabef 641 SUPERFAMILY SSF52540 2 191 8.65E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6079 ee71afcab25e2046a550870a7afeabef 641 SUPERFAMILY SSF50465 269 365 6.83E-19 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PA257_6079 ee71afcab25e2046a550870a7afeabef 641 Gene3D G3DSA:1.10.10.2770 433 565 7.5E-24 T 12-10-2018 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 Gene3D G3DSA:3.40.50.300 1 164 3.7E-48 T 12-10-2018 PA257_6079 ee71afcab25e2046a550870a7afeabef 641 SUPERFAMILY SSF46785 578 626 5.44E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6079 ee71afcab25e2046a550870a7afeabef 641 SUPERFAMILY SSF46785 432 502 5.71E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5300 ecd265171699fdd768f5a7abe2b2f3cc 221 SMART SM00342 132 214 3.0E-9 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5300 ecd265171699fdd768f5a7abe2b2f3cc 221 Gene3D G3DSA:1.10.10.60 115 212 6.8E-15 T 12-10-2018 PA257_5300 ecd265171699fdd768f5a7abe2b2f3cc 221 Pfam PF12833 Helix-turn-helix domain 138 208 9.2E-12 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_6958 c708b21f2427fc71bcde751da15b347d 141 Gene3D G3DSA:2.60.15.10 3 90 2.2E-29 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6958 c708b21f2427fc71bcde751da15b347d 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 3.9E-45 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6958 c708b21f2427fc71bcde751da15b347d 141 SUPERFAMILY SSF51344 4 86 9.55E-24 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6958 c708b21f2427fc71bcde751da15b347d 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 19.495 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6958 c708b21f2427fc71bcde751da15b347d 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 9.0E-38 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6958 c708b21f2427fc71bcde751da15b347d 141 SUPERFAMILY SSF46604 89 137 2.48E-11 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6958 c708b21f2427fc71bcde751da15b347d 141 Gene3D G3DSA:1.20.5.440 91 133 1.2E-11 T 12-10-2018 PA257_6958 c708b21f2427fc71bcde751da15b347d 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 132 1.3E-7 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain PA257_6958 c708b21f2427fc71bcde751da15b347d 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 4.3E-30 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_1641 b2f818f4a7061da138112d4546ec5e7c 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 168 1.3E-67 T 12-10-2018 IPR006498 Tail tube protein PA257_1641 b2f818f4a7061da138112d4546ec5e7c 169 Pfam PF04985 Phage tail tube protein FII 5 168 6.5E-57 T 12-10-2018 IPR006498 Tail tube protein PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 Pfam PF13091 PLD-like domain 332 457 7.8E-28 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 Pfam PF13091 PLD-like domain 150 290 2.1E-7 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 Hamap MF_00190 Cardiolipin synthase A [clsA]. 14 491 45.908 T 12-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 Gene3D G3DSA:3.30.870.10 304 491 4.2E-30 T 12-10-2018 PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 SMART SM00155 230 257 1.7E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 SMART SM00155 404 431 3.1E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 SUPERFAMILY SSF56024 118 320 1.7E-51 T 12-10-2018 PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 SUPERFAMILY SSF56024 282 470 5.16E-47 T 12-10-2018 PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 26 491 4.7E-110 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 Gene3D G3DSA:3.30.870.10 124 303 1.4E-43 T 12-10-2018 PA257_6789 7eb45af356e4b87aa7d120d9db356c3a 491 Pfam PF13396 Phospholipase_D-nuclease N-terminal 31 72 7.1E-5 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 SUPERFAMILY SSF46626 41 173 2.68E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 Gene3D G3DSA:1.10.760.10 313 436 4.9E-31 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 Gene3D G3DSA:1.10.760.10 437 566 1.5E-36 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 SUPERFAMILY SSF46626 328 436 6.52E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 Gene3D G3DSA:1.10.760.10 25 154 7.1E-11 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 SUPERFAMILY SSF46626 452 556 5.18E-24 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 Gene3D G3DSA:1.10.760.10 567 690 1.4E-41 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 Pfam PF00034 Cytochrome c 51 149 2.1E-4 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 Gene3D G3DSA:1.10.760.10 189 302 1.2E-6 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 SUPERFAMILY SSF46626 569 676 6.49E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 328 409 1.2E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 578 665 1.7E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_5747 9416cf8a9d1d8cb85270a0e46627742f 692 SUPERFAMILY SSF46626 197 307 2.68E-14 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3415 9fe3ebfdbf963babbf695906caa3630d 488 Gene3D G3DSA:3.90.550.10 7 360 1.3E-112 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_3415 9fe3ebfdbf963babbf695906caa3630d 488 Gene3D G3DSA:2.60.120.10 369 470 1.1E-14 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_3415 9fe3ebfdbf963babbf695906caa3630d 488 SUPERFAMILY SSF53448 8 292 3.07E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_3415 9fe3ebfdbf963babbf695906caa3630d 488 SUPERFAMILY SSF51182 191 480 3.09E-79 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_3415 9fe3ebfdbf963babbf695906caa3630d 488 Pfam PF01050 Mannose-6-phosphate isomerase 325 475 1.1E-63 T 12-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 PA257_3415 9fe3ebfdbf963babbf695906caa3630d 488 Pfam PF00483 Nucleotidyl transferase 9 296 2.9E-59 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PA257_3415 9fe3ebfdbf963babbf695906caa3630d 488 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 7 479 3.2E-173 T 12-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 PA257_3718 2e1cc255b5f1a11b505848fe5ed969b7 396 Gene3D G3DSA:1.10.287.470 99 172 1.0E-95 T 12-10-2018 PA257_3718 2e1cc255b5f1a11b505848fe5ed969b7 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 375 1.1E-71 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_3718 2e1cc255b5f1a11b505848fe5ed969b7 396 Pfam PF00529 HlyD membrane-fusion protein of T1SS 40 360 4.7E-12 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_3718 2e1cc255b5f1a11b505848fe5ed969b7 396 Gene3D G3DSA:2.40.30.170 52 304 1.0E-95 T 12-10-2018 PA257_3718 2e1cc255b5f1a11b505848fe5ed969b7 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 294 1.5E-10 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_3718 2e1cc255b5f1a11b505848fe5ed969b7 396 Gene3D G3DSA:2.40.420.20 305 373 1.0E-95 T 12-10-2018 PA257_3718 2e1cc255b5f1a11b505848fe5ed969b7 396 SUPERFAMILY SSF111369 53 300 4.71E-72 T 12-10-2018 PA257_3718 2e1cc255b5f1a11b505848fe5ed969b7 396 Gene3D G3DSA:2.40.50.100 64 208 1.0E-95 T 12-10-2018 PA257_0564 7de9134ccf8f6b118ddf9b186ff34af8 639 SMART SM00490 263 344 1.6E-32 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_0564 7de9134ccf8f6b118ddf9b186ff34af8 639 SMART SM00487 20 227 8.3E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_0564 7de9134ccf8f6b118ddf9b186ff34af8 639 Pfam PF00270 DEAD/DEAH box helicase 25 199 3.8E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_0564 7de9134ccf8f6b118ddf9b186ff34af8 639 Gene3D G3DSA:3.40.50.300 1 215 1.7E-75 T 12-10-2018 PA257_0564 7de9134ccf8f6b118ddf9b186ff34af8 639 SUPERFAMILY SSF52540 80 365 3.4E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0564 7de9134ccf8f6b118ddf9b186ff34af8 639 SUPERFAMILY SSF52540 24 102 2.92E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0564 7de9134ccf8f6b118ddf9b186ff34af8 639 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PA257_0564 7de9134ccf8f6b118ddf9b186ff34af8 639 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 566 50.609 T 12-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 PA257_0564 7de9134ccf8f6b118ddf9b186ff34af8 639 Gene3D G3DSA:3.40.50.300 219 437 1.5E-49 T 12-10-2018 PA257_0564 7de9134ccf8f6b118ddf9b186ff34af8 639 Pfam PF00271 Helicase conserved C-terminal domain 241 344 2.7E-26 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_4953 bee4633a6800a4b8c341bd954915e949 254 SMART SM00382 28 225 3.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4953 bee4633a6800a4b8c341bd954915e949 254 SUPERFAMILY SSF52540 4 248 1.89E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4953 bee4633a6800a4b8c341bd954915e949 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4953 bee4633a6800a4b8c341bd954915e949 254 Gene3D G3DSA:3.40.50.300 2 254 8.4E-77 T 12-10-2018 PA257_4953 bee4633a6800a4b8c341bd954915e949 254 Pfam PF00005 ABC transporter 19 178 5.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4953 bee4633a6800a4b8c341bd954915e949 254 PIRSF PIRSF039085 1 254 1.5E-116 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PA257_4152 873c2a3d8963f08df1f8c6b40dda81ba 288 Pfam PF01614 Bacterial transcriptional regulator 162 278 1.4E-10 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal PA257_4152 873c2a3d8963f08df1f8c6b40dda81ba 288 SMART SM00346 44 134 2.6E-21 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_4152 873c2a3d8963f08df1f8c6b40dda81ba 288 SUPERFAMILY SSF55781 111 286 7.19E-37 T 12-10-2018 PA257_4152 873c2a3d8963f08df1f8c6b40dda81ba 288 Gene3D G3DSA:3.30.450.40 117 285 1.3E-31 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_4152 873c2a3d8963f08df1f8c6b40dda81ba 288 SUPERFAMILY SSF46785 44 118 6.83E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4152 873c2a3d8963f08df1f8c6b40dda81ba 288 Pfam PF09339 IclR helix-turn-helix domain 46 95 3.0E-16 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_4152 873c2a3d8963f08df1f8c6b40dda81ba 288 Gene3D G3DSA:1.10.10.10 30 112 1.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3475 e4257d4c69407f0e547c19a22f5dbc1c 209 Pfam PF00665 Integrase core domain 42 157 2.4E-29 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_3475 e4257d4c69407f0e547c19a22f5dbc1c 209 Gene3D G3DSA:3.30.420.10 40 188 1.4E-14 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_3475 e4257d4c69407f0e547c19a22f5dbc1c 209 SUPERFAMILY SSF53098 35 197 8.35E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_4852 dab91d801a5e44c3cdf0015325761680 264 Gene3D G3DSA:3.40.225.10 26 259 2.2E-79 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PA257_4852 dab91d801a5e44c3cdf0015325761680 264 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 217 7.7E-38 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal PA257_4852 dab91d801a5e44c3cdf0015325761680 264 SUPERFAMILY SSF53639 27 244 6.67E-43 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PA257_4852 dab91d801a5e44c3cdf0015325761680 264 SMART SM01007 31 217 3.9E-35 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal PA257_6130 ef9211fc87502928495868c503f3b871 535 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 10 535 44.702 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_6130 ef9211fc87502928495868c503f3b871 535 SMART SM00798 140 467 1.8E-206 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_6130 ef9211fc87502928495868c503f3b871 535 SUPERFAMILY SSF52335 10 197 4.45E-70 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PA257_6130 ef9211fc87502928495868c503f3b871 535 SMART SM00851 22 135 2.6E-59 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain PA257_6130 ef9211fc87502928495868c503f3b871 535 Gene3D G3DSA:3.40.50.1380 1 201 7.7E-86 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PA257_6130 ef9211fc87502928495868c503f3b871 535 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 11 535 2.1E-234 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_6130 ef9211fc87502928495868c503f3b871 535 Pfam PF01808 AICARFT/IMPCHase bienzyme 140 466 6.7E-115 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_6130 ef9211fc87502928495868c503f3b871 535 SUPERFAMILY SSF53927 222 535 1.0E-127 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PA257_6130 ef9211fc87502928495868c503f3b871 535 PIRSF PIRSF000414 4 535 2.5E-216 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_6130 ef9211fc87502928495868c503f3b871 535 Gene3D G3DSA:3.40.140.20 398 535 1.4E-60 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_6130 ef9211fc87502928495868c503f3b871 535 Pfam PF02142 MGS-like domain 22 135 1.8E-27 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain PA257_6130 ef9211fc87502928495868c503f3b871 535 Gene3D G3DSA:3.40.140.20 220 377 1.8E-52 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_0365 18e0fb5865e5494a89f492e35f76000c 456 Pfam PF00202 Aminotransferase class-III 37 446 2.9E-94 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0365 18e0fb5865e5494a89f492e35f76000c 456 SUPERFAMILY SSF53383 11 449 3.81E-129 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_0365 18e0fb5865e5494a89f492e35f76000c 456 PIRSF PIRSF000521 143 450 6.2E-21 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0365 18e0fb5865e5494a89f492e35f76000c 456 PIRSF PIRSF000521 35 154 3.8E-9 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0365 18e0fb5865e5494a89f492e35f76000c 456 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0365 18e0fb5865e5494a89f492e35f76000c 456 Gene3D G3DSA:3.90.1150.10 17 448 4.2E-184 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_0365 18e0fb5865e5494a89f492e35f76000c 456 Gene3D G3DSA:3.40.640.10 71 345 4.2E-184 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6027 fead05bdc6eb4eea1bb96d49fc289fa3 209 SUPERFAMILY SSF53955 36 202 6.33E-35 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_6027 fead05bdc6eb4eea1bb96d49fc289fa3 209 Gene3D G3DSA:1.10.530.10 19 192 2.8E-33 T 12-10-2018 PA257_6027 fead05bdc6eb4eea1bb96d49fc289fa3 209 Pfam PF01464 Transglycosylase SLT domain 47 154 1.3E-13 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 PA257_5978 834816034bd2f88d8d86082145d2379a 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.2E-290 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 PA257_5978 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF53067 187 382 2.07E-69 T 12-10-2018 PA257_5978 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.420.40 180 366 1.4E-168 T 12-10-2018 PA257_5978 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.420.40 5 379 1.4E-168 T 12-10-2018 PA257_5978 834816034bd2f88d8d86082145d2379a 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 36.888 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 PA257_5978 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:2.60.34.10 383 523 2.2E-65 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF100934 507 603 1.01E-23 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.90.640.10 229 316 1.4E-168 T 12-10-2018 PA257_5978 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 388 407 8.0E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 334 350 8.0E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 365 385 8.0E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.0E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.0E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 138 158 8.0E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.0E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 469 485 8.0E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 198 208 8.0E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF53067 4 183 8.85E-66 T 12-10-2018 PA257_5978 834816034bd2f88d8d86082145d2379a 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 Pfam PF00012 Hsp70 protein 4 603 7.2E-265 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF100920 384 539 3.66E-60 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 PA257_5978 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:1.20.1270.10 524 602 2.0E-24 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 PA257_2181 1cba6d9af2ae593c9ff3fa77bce256dd 919 Gene3D G3DSA:3.10.350.10 163 242 1.3E-8 T 12-10-2018 IPR036779 LysM domain superfamily PA257_2181 1cba6d9af2ae593c9ff3fa77bce256dd 919 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 875 918 1.9E-21 T 12-10-2018 IPR020011 Motility protein FimV, C-terminal PA257_2181 1cba6d9af2ae593c9ff3fa77bce256dd 919 Gene3D G3DSA:1.25.40.10 547 621 8.9E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2181 1cba6d9af2ae593c9ff3fa77bce256dd 919 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 182 254 1.2E-30 T 12-10-2018 IPR020012 Motility protein FimV, N-terminal PA257_2181 1cba6d9af2ae593c9ff3fa77bce256dd 919 SMART SM00257 175 230 0.0037 T 12-10-2018 IPR018392 LysM domain PA257_2181 1cba6d9af2ae593c9ff3fa77bce256dd 919 SUPERFAMILY SSF48452 526 607 4.81E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2181 1cba6d9af2ae593c9ff3fa77bce256dd 919 Gene3D G3DSA:1.20.58.2200 857 919 2.5E-28 T 12-10-2018 IPR038440 FimV, C-terminal domain superfamily PA257_2841 77caa54ae61f5f9bb92c5f143ff1d134 281 Gene3D G3DSA:3.40.50.300 2 207 3.1E-30 T 12-10-2018 PA257_2841 77caa54ae61f5f9bb92c5f143ff1d134 281 SUPERFAMILY SSF52540 8 249 2.29E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2841 77caa54ae61f5f9bb92c5f143ff1d134 281 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 173 1.1E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_2841 77caa54ae61f5f9bb92c5f143ff1d134 281 SMART SM00382 25 183 7.9E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2492 a5ab2aabf8e15a7b6f04fa71d9a1ef93 163 Gene3D G3DSA:1.10.10.10 12 157 7.4E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2492 a5ab2aabf8e15a7b6f04fa71d9a1ef93 163 SUPERFAMILY SSF46785 15 155 3.54E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2492 a5ab2aabf8e15a7b6f04fa71d9a1ef93 163 SMART SM00347 40 143 1.5E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_2492 a5ab2aabf8e15a7b6f04fa71d9a1ef93 163 Pfam PF01047 MarR family 47 110 3.5E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4679 05fe6bebbb4b19464a51530e31c9a888 325 Pfam PF00535 Glycosyl transferase family 2 31 173 7.6E-7 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_4679 05fe6bebbb4b19464a51530e31c9a888 325 Gene3D G3DSA:3.90.550.10 13 219 1.4E-14 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4679 05fe6bebbb4b19464a51530e31c9a888 325 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 11 291 1.3E-118 T 12-10-2018 IPR006446 Rhamnosyltransferase PA257_4679 05fe6bebbb4b19464a51530e31c9a888 325 SUPERFAMILY SSF53448 9 280 5.25E-23 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6949 f83a21bb932d777d61d8dd7f5ba86b2a 674 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 16 668 3.8E-228 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ PA257_6949 f83a21bb932d777d61d8dd7f5ba86b2a 674 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 112 592 5.4E-88 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PA257_5327 191ff02bdf5e071beeab9764bc4acffa 319 PIRSF PIRSF018266 5 318 1.4E-70 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_5327 191ff02bdf5e071beeab9764bc4acffa 319 Pfam PF04773 FecR protein 115 208 2.5E-14 T 12-10-2018 IPR006860 FecR protein PA257_5327 191ff02bdf5e071beeab9764bc4acffa 319 Gene3D G3DSA:2.60.120.1440 113 235 2.1E-10 T 12-10-2018 PA257_5327 191ff02bdf5e071beeab9764bc4acffa 319 Pfam PF16220 Domain of unknown function (DUF4880) 17 57 1.5E-11 T 12-10-2018 IPR032623 FecR, N-terminal PA257_6667 c9d8414ed64293646a86879775609864 640 Gene3D G3DSA:3.40.50.300 1 393 2.5E-25 T 12-10-2018 PA257_6667 c9d8414ed64293646a86879775609864 640 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 357 2.6E-14 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_6667 c9d8414ed64293646a86879775609864 640 SUPERFAMILY SSF52540 1 376 3.78E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6074 1edafbaafa40d48d54aa95619256ef0b 240 Gene3D G3DSA:3.60.110.10 2 239 3.7E-45 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_6074 1edafbaafa40d48d54aa95619256ef0b 240 Pfam PF00795 Carbon-nitrogen hydrolase 4 231 1.0E-23 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PA257_6074 1edafbaafa40d48d54aa95619256ef0b 240 SUPERFAMILY SSF56317 4 234 1.31E-46 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 18 319 5.2E-91 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 92 101 3.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 149 166 3.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 54 76 3.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 3.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 3.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 3.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 Gene3D G3DSA:3.40.50.1370 150 306 1.0E-90 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 316 1.0E-23 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 150 161 7.7E-18 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 7.7E-18 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 7.7E-18 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 64 83 7.7E-18 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 18 162 2.2E-41 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 64 71 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 17 321 41.802 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 SUPERFAMILY SSF53671 17 321 3.8E-95 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PA257_0537 7b4501cd414851280dfb8d473ca15a82 334 Gene3D G3DSA:3.40.50.1370 18 317 1.0E-90 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 Gene3D G3DSA:1.10.8.60 374 440 1.5E-20 T 12-10-2018 PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 Gene3D G3DSA:3.30.70.260 1 80 3.0E-17 T 12-10-2018 PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 SMART SM00382 222 367 2.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 461 508 1.5E-24 T 12-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 Pfam PF00158 Sigma-54 interaction domain 203 369 2.9E-64 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 226 239 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 Gene3D G3DSA:1.10.10.60 449 509 3.3E-23 T 12-10-2018 PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 SUPERFAMILY SSF46689 456 508 2.45E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 Gene3D G3DSA:3.30.450.20 81 186 4.6E-9 T 12-10-2018 PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 SUPERFAMILY SSF52540 203 445 1.2E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 SUPERFAMILY SSF55785 80 130 3.29E-5 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 Pfam PF13188 PAS domain 81 133 2.6E-4 T 12-10-2018 IPR000014 PAS domain PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 416 425 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_3180 0caea87c4a331f85eedb8aedcdb2a4be 511 Gene3D G3DSA:3.40.50.300 190 373 2.3E-64 T 12-10-2018 PA257_1613 1d26eb128e333efedd23830af1cea865 97 Pfam PF03374 Phage antirepressor protein KilAC domain 4 80 1.8E-7 T 12-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 PA257_5094 a623c8bee62d9b8ca75011ed9c7e40db 431 Gene3D G3DSA:3.20.20.70 34 177 6.9E-7 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_5094 a623c8bee62d9b8ca75011ed9c7e40db 431 Pfam PF05853 beta-keto acid cleavage enzyme 44 136 2.5E-6 T 12-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 PA257_6575 792eccc48964f0a1fe849d907752ebc1 394 Pfam PF01494 FAD binding domain 4 317 4.2E-17 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 PA257_6575 792eccc48964f0a1fe849d907752ebc1 394 SUPERFAMILY SSF51905 4 383 6.83E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6575 792eccc48964f0a1fe849d907752ebc1 394 Gene3D G3DSA:3.50.50.60 7 332 8.0E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6575 792eccc48964f0a1fe849d907752ebc1 394 Gene3D G3DSA:3.30.9.50 82 270 8.0E-97 T 12-10-2018 PA257_6575 792eccc48964f0a1fe849d907752ebc1 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.5E-11 T 12-10-2018 PA257_6575 792eccc48964f0a1fe849d907752ebc1 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.5E-11 T 12-10-2018 PA257_6575 792eccc48964f0a1fe849d907752ebc1 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.5E-11 T 12-10-2018 PA257_6575 792eccc48964f0a1fe849d907752ebc1 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.5E-11 T 12-10-2018 PA257_6575 792eccc48964f0a1fe849d907752ebc1 394 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 1.6E-149 T 12-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 PA257_6575 792eccc48964f0a1fe849d907752ebc1 394 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 388 1.5E-123 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 PA257_0572 0cf6aa792d1181355c2d3c5401f43dc0 492 Pfam PF03929 PepSY-associated TM region 8 277 7.9E-11 T 12-10-2018 IPR005625 PepSY-associated TM protein PA257_5712 5656ce669b91285f5e91d0374639a91d 608 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 2 209 1.4E-87 T 12-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class PA257_5712 5656ce669b91285f5e91d0374639a91d 608 Pfam PF07514 Putative helicase 2 307 1.2E-119 T 12-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative PA257_5712 5656ce669b91285f5e91d0374639a91d 608 Gene3D G3DSA:2.40.10.200 493 594 1.4E-21 T 12-10-2018 PA257_5712 5656ce669b91285f5e91d0374639a91d 608 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 476 598 2.0E-39 T 12-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal PA257_5712 5656ce669b91285f5e91d0374639a91d 608 SUPERFAMILY SSF46785 473 599 5.44E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5712 5656ce669b91285f5e91d0374639a91d 608 Gene3D G3DSA:1.10.10.10 477 547 1.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5712 5656ce669b91285f5e91d0374639a91d 608 Gene3D G3DSA:1.10.3210.40 1 216 2.7E-36 T 12-10-2018 PA257_4207 f9d2546b6f54d74bef5cffda10d14726 113 PIRSF PIRSF021239 1 113 3.2E-54 T 12-10-2018 IPR007437 Protein of unknown function DUF486 PA257_4207 f9d2546b6f54d74bef5cffda10d14726 113 Pfam PF04342 Putative member of DMT superfamily (DUF486) 7 111 4.8E-47 T 12-10-2018 IPR007437 Protein of unknown function DUF486 PA257_4389 3e9b8c8efbf11c280915b74689153f49 252 SUPERFAMILY SSF81301 40 115 4.21E-11 T 12-10-2018 PA257_4389 3e9b8c8efbf11c280915b74689153f49 252 Gene3D G3DSA:3.30.460.10 19 91 5.2E-7 T 12-10-2018 PA257_4389 3e9b8c8efbf11c280915b74689153f49 252 Pfam PF01909 Nucleotidyltransferase domain 40 78 2.2E-5 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PA257_5351 5845df0dbfc8ba3142a2e9d37790e97c 538 SUPERFAMILY SSF58104 77 347 2.62E-56 T 12-10-2018 PA257_5351 5845df0dbfc8ba3142a2e9d37790e97c 538 Gene3D G3DSA:1.10.287.950 59 355 1.3E-55 T 12-10-2018 PA257_5351 5845df0dbfc8ba3142a2e9d37790e97c 538 SMART SM00283 85 343 6.7E-46 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5351 5845df0dbfc8ba3142a2e9d37790e97c 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 131 310 9.8E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5463 efe3a0005cef433b72fafa9f31c9c652 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 296 4.4E-86 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 PA257_5463 efe3a0005cef433b72fafa9f31c9c652 303 Gene3D G3DSA:1.10.1040.10 174 294 1.2E-36 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_5463 efe3a0005cef433b72fafa9f31c9c652 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 174 292 1.0E-31 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain PA257_5463 efe3a0005cef433b72fafa9f31c9c652 303 SUPERFAMILY SSF51735 1 169 3.57E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5463 efe3a0005cef433b72fafa9f31c9c652 303 Gene3D G3DSA:3.40.50.720 1 173 2.8E-35 T 12-10-2018 PA257_5463 efe3a0005cef433b72fafa9f31c9c652 303 SUPERFAMILY SSF48179 174 293 4.42E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_5463 efe3a0005cef433b72fafa9f31c9c652 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 149 1.5E-34 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain PA257_4425 da3ee53fffdac817662f929eb2b2aded 278 SUPERFAMILY SSF54506 4 276 1.57E-67 T 12-10-2018 PA257_4425 da3ee53fffdac817662f929eb2b2aded 278 PIRSF PIRSF016184 3 278 3.9E-61 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_4425 da3ee53fffdac817662f929eb2b2aded 278 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 256 5.5E-51 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_4425 da3ee53fffdac817662f929eb2b2aded 278 Pfam PF02567 Phenazine biosynthesis-like protein 10 256 2.5E-50 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_4425 da3ee53fffdac817662f929eb2b2aded 278 Gene3D G3DSA:3.10.310.10 9 125 2.5E-75 T 12-10-2018 PA257_4425 da3ee53fffdac817662f929eb2b2aded 278 Gene3D G3DSA:3.10.310.10 126 268 2.5E-75 T 12-10-2018 PA257_5218 f5c34d7a06e0d8cf50de69b80a023374 77 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 77 7.7E-32 T 12-10-2018 IPR021676 Protein of unknown function DUF3262 PA257_5218 f5c34d7a06e0d8cf50de69b80a023374 77 Pfam PF11660 Protein of unknown function (DUF3262) 1 76 5.8E-26 T 12-10-2018 IPR021676 Protein of unknown function DUF3262 PA257_3701 ccc252f249441d9b3d5b3407a9d47036 552 SUPERFAMILY SSF52518 369 547 1.32E-56 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_3701 ccc252f249441d9b3d5b3407a9d47036 552 Gene3D G3DSA:3.40.50.970 2 184 5.6E-63 T 12-10-2018 PA257_3701 ccc252f249441d9b3d5b3407a9d47036 552 Gene3D G3DSA:3.40.50.1220 190 358 2.7E-40 T 12-10-2018 PA257_3701 ccc252f249441d9b3d5b3407a9d47036 552 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 171 4.3E-55 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PA257_3701 ccc252f249441d9b3d5b3407a9d47036 552 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 332 1.4E-28 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PA257_3701 ccc252f249441d9b3d5b3407a9d47036 552 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 537 3.4E-42 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PA257_3701 ccc252f249441d9b3d5b3407a9d47036 552 SUPERFAMILY SSF52518 7 182 2.27E-55 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_3701 ccc252f249441d9b3d5b3407a9d47036 552 SUPERFAMILY SSF52467 160 357 1.66E-38 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_3701 ccc252f249441d9b3d5b3407a9d47036 552 Gene3D G3DSA:3.40.50.970 365 551 2.0E-56 T 12-10-2018 PA257_3701 ccc252f249441d9b3d5b3407a9d47036 552 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 428 447 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PA257_4576 1eeeca24bec2713bbdd73bcdddd24492 201 SUPERFAMILY SSF52218 1 194 6.37E-53 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_4576 1eeeca24bec2713bbdd73bcdddd24492 201 Pfam PF02525 Flavodoxin-like fold 1 186 6.2E-45 T 12-10-2018 IPR003680 Flavodoxin-like fold PA257_4576 1eeeca24bec2713bbdd73bcdddd24492 201 Gene3D G3DSA:3.40.50.360 1 197 1.1E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 156 464 4.6E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:3.50.50.60 263 405 4.4E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 SUPERFAMILY SSF46548 15 165 9.94E-39 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 14 477 5.7E-238 T 12-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:3.40.50.720 153 262 2.7E-18 T 12-10-2018 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 32 142 6.5E-38 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 297 311 7.9E-36 T 12-10-2018 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 156 178 7.9E-36 T 12-10-2018 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 331 344 7.9E-36 T 12-10-2018 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 179 192 7.9E-36 T 12-10-2018 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 221 231 7.9E-36 T 12-10-2018 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:1.10.1060.10 17 152 8.9E-34 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_6326 9dc9a8a68d4f1bf148ea0b06cf94b147 477 SUPERFAMILY SSF51971 153 406 2.0E-70 T 12-10-2018 PA257_2006 dcd3655fd1c5807f65fa74c18ddb5d0c 423 SUPERFAMILY SSF56935 38 423 1.65E-24 T 12-10-2018 PA257_2006 dcd3655fd1c5807f65fa74c18ddb5d0c 423 Gene3D G3DSA:2.40.160.10 13 423 5.2E-166 T 12-10-2018 IPR023614 Porin domain superfamily PA257_2006 dcd3655fd1c5807f65fa74c18ddb5d0c 423 Pfam PF07396 Phosphate-selective porin O and P 41 423 1.3E-108 T 12-10-2018 IPR010870 Phosphate-selective porin O/P PA257_2280 b7af5924d6e3922495fffe70fa49e468 268 Pfam PF03473 MOSC domain 142 265 9.2E-32 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PA257_2280 b7af5924d6e3922495fffe70fa49e468 268 Pfam PF03476 MOSC N-terminal beta barrel domain 1 119 1.2E-34 T 12-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 PA257_2280 b7af5924d6e3922495fffe70fa49e468 268 SUPERFAMILY SSF50800 2 267 5.58E-22 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PA257_2280 b7af5924d6e3922495fffe70fa49e468 268 SUPERFAMILY SSF141673 4 133 4.84E-34 T 12-10-2018 PA257_3592 ef7b758ca922bb712e437bacaf979679 840 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 549 793 8.0E-89 T 12-10-2018 IPR014145 DNA ligase D, polymerase domain PA257_3592 ef7b758ca922bb712e437bacaf979679 840 Pfam PF01068 ATP dependent DNA ligase domain 224 399 1.6E-22 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 PA257_3592 ef7b758ca922bb712e437bacaf979679 840 Gene3D G3DSA:2.40.50.140 402 523 1.4E-37 T 12-10-2018 PA257_3592 ef7b758ca922bb712e437bacaf979679 840 SUPERFAMILY SSF50249 403 523 3.98E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_3592 ef7b758ca922bb712e437bacaf979679 840 SUPERFAMILY SSF56091 216 399 1.58E-45 T 12-10-2018 PA257_3592 ef7b758ca922bb712e437bacaf979679 840 Pfam PF13298 DNA polymerase Ligase (LigD) 40 144 4.9E-39 T 12-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain PA257_3592 ef7b758ca922bb712e437bacaf979679 840 Gene3D G3DSA:3.90.920.30 556 840 2.6E-100 T 12-10-2018 PA257_3592 ef7b758ca922bb712e437bacaf979679 840 Pfam PF04679 ATP dependent DNA ligase C terminal region 418 515 1.1E-23 T 12-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 PA257_3592 ef7b758ca922bb712e437bacaf979679 840 Gene3D G3DSA:3.30.1490.70 229 397 1.4E-47 T 12-10-2018 PA257_3592 ef7b758ca922bb712e437bacaf979679 840 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 7 162 5.5E-71 T 12-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain PA257_3592 ef7b758ca922bb712e437bacaf979679 840 Gene3D G3DSA:3.30.470.30 241 356 1.4E-47 T 12-10-2018 PA257_3592 ef7b758ca922bb712e437bacaf979679 840 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 228 823 4.9E-229 T 12-10-2018 IPR014143 DNA ligase D PA257_3592 ef7b758ca922bb712e437bacaf979679 840 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 219 521 5.1E-111 T 12-10-2018 IPR014146 DNA ligase D, ligase domain PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF03144 Elongation factor Tu domain 2 208 278 2.1E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:2.40.30.10 189 288 2.8E-33 T 12-10-2018 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:3.30.70.870 289 370 4.5E-37 T 12-10-2018 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 SUPERFAMILY SSF54980 403 496 4.65E-24 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:3.40.50.300 3 188 3.6E-70 T 12-10-2018 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 2.7E-295 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 8.6E-51 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 93 104 8.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 77 87 8.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 9 22 8.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 52 60 8.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 SUPERFAMILY SSF54980 295 373 1.47E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:3.30.70.3380 371 481 6.3E-37 T 12-10-2018 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:3.30.70.2570 482 556 2.6E-34 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 1.6E-51 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 175 3.0E-18 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF00679 Elongation factor G C-terminus 402 487 7.4E-19 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 SUPERFAMILY SSF52540 3 235 5.7E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5142 e2fbd012fd7dcc8c3de2da414169ebe4 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 302.884 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 PA257_0668 cd4a827757d5b97998eb534b065670de 227 Gene3D G3DSA:1.10.10.10 150 227 7.2E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0668 cd4a827757d5b97998eb534b065670de 227 Pfam PF00027 Cyclic nucleotide-binding domain 35 122 6.3E-18 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_0668 cd4a827757d5b97998eb534b065670de 227 Pfam PF13545 Crp-like helix-turn-helix domain 156 224 1.3E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_0668 cd4a827757d5b97998eb534b065670de 227 SMART SM00100 16 135 2.9E-25 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_0668 cd4a827757d5b97998eb534b065670de 227 SUPERFAMILY SSF51206 9 150 4.45E-32 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like PA257_0668 cd4a827757d5b97998eb534b065670de 227 SMART SM00419 171 219 3.2E-14 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_0668 cd4a827757d5b97998eb534b065670de 227 Gene3D G3DSA:2.60.120.10 1 149 4.3E-62 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_0668 cd4a827757d5b97998eb534b065670de 227 SUPERFAMILY SSF46785 150 224 2.05E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0376 64593a684ddf8667f2007307612f74c2 313 Pfam PF12146 Serine aminopeptidase, S33 67 297 2.1E-30 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 PA257_0376 64593a684ddf8667f2007307612f74c2 313 Gene3D G3DSA:3.40.50.1820 49 311 1.0E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0376 64593a684ddf8667f2007307612f74c2 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 253 267 1.1E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0376 64593a684ddf8667f2007307612f74c2 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 111 1.1E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0376 64593a684ddf8667f2007307612f74c2 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 1.1E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0376 64593a684ddf8667f2007307612f74c2 313 SUPERFAMILY SSF53474 53 296 1.42E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0471 2239967f08b2775c8a97ca07e3cfe807 230 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 PA257_0471 2239967f08b2775c8a97ca07e3cfe807 230 Gene3D G3DSA:3.20.20.10 1 227 1.6E-86 T 12-10-2018 IPR029066 PLP-binding barrel PA257_0471 2239967f08b2775c8a97ca07e3cfe807 230 PIRSF PIRSF004848 1 228 3.8E-70 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 PA257_0471 2239967f08b2775c8a97ca07e3cfe807 230 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 222 34.139 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 PA257_0471 2239967f08b2775c8a97ca07e3cfe807 230 SUPERFAMILY SSF51419 1 221 1.57E-81 T 12-10-2018 IPR029066 PLP-binding barrel PA257_0471 2239967f08b2775c8a97ca07e3cfe807 230 Pfam PF01168 Alanine racemase, N-terminal domain 9 223 4.3E-34 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PA257_0471 2239967f08b2775c8a97ca07e3cfe807 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 223 2.1E-74 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 1.7E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 1.7E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 1.7E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 ProSitePatterns PS00622 LuxR-type HTH domain signature. 191 218 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 SUPERFAMILY SSF75516 9 160 1.57E-35 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 SUPERFAMILY SSF46894 170 237 7.82E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 231 5.6E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 Gene3D G3DSA:3.30.450.80 1 172 2.8E-69 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 SMART SM00421 174 231 5.2E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 Gene3D G3DSA:1.10.10.10 173 238 1.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4363 b1eafef2256c3a7b8574fc5215077986 239 Pfam PF03472 Autoinducer binding domain 18 158 4.7E-36 T 12-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PA257_3610 06ae67d3ffc4f114215bbd1faeafacfe 310 Pfam PF03466 LysR substrate binding domain 88 290 1.0E-42 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3610 06ae67d3ffc4f114215bbd1faeafacfe 310 Gene3D G3DSA:1.10.10.10 3 88 3.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3610 06ae67d3ffc4f114215bbd1faeafacfe 310 SUPERFAMILY SSF46785 6 111 8.52E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3610 06ae67d3ffc4f114215bbd1faeafacfe 310 Gene3D G3DSA:3.40.190.10 162 262 8.1E-59 T 12-10-2018 PA257_3610 06ae67d3ffc4f114215bbd1faeafacfe 310 Gene3D G3DSA:3.40.190.10 90 288 8.1E-59 T 12-10-2018 PA257_3610 06ae67d3ffc4f114215bbd1faeafacfe 310 SUPERFAMILY SSF53850 87 294 6.88E-43 T 12-10-2018 PA257_3610 06ae67d3ffc4f114215bbd1faeafacfe 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 8.1E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0330 3ddc55be8525ebe6be9f7c8e09d9fd43 426 SUPERFAMILY SSF53383 22 425 1.75E-141 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_0330 3ddc55be8525ebe6be9f7c8e09d9fd43 426 PIRSF PIRSF000521 172 425 1.6E-40 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0330 3ddc55be8525ebe6be9f7c8e09d9fd43 426 PIRSF PIRSF000521 25 129 0.0049 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0330 3ddc55be8525ebe6be9f7c8e09d9fd43 426 PIRSF PIRSF000521 124 157 0.64 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0330 3ddc55be8525ebe6be9f7c8e09d9fd43 426 Pfam PF00202 Aminotransferase class-III 18 421 1.0E-137 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0330 3ddc55be8525ebe6be9f7c8e09d9fd43 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0330 3ddc55be8525ebe6be9f7c8e09d9fd43 426 Gene3D G3DSA:3.90.1150.10 25 419 2.2E-166 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_0330 3ddc55be8525ebe6be9f7c8e09d9fd43 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 10 421 1.1E-163 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 PA257_0330 3ddc55be8525ebe6be9f7c8e09d9fd43 426 Gene3D G3DSA:3.40.640.10 60 319 2.2E-166 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_2303 8813cc7ff2be53bff7b70d03e870c4b4 469 Gene3D G3DSA:1.20.1740.10 11 464 7.5E-57 T 12-10-2018 PA257_2303 8813cc7ff2be53bff7b70d03e870c4b4 469 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PA257_2303 8813cc7ff2be53bff7b70d03e870c4b4 469 PIRSF PIRSF006060 1 468 1.3E-78 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_2303 8813cc7ff2be53bff7b70d03e870c4b4 469 Pfam PF00324 Amino acid permease 19 457 4.0E-116 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_0112 44f47d65e14fb404463a519fbec6d713 646 Gene3D G3DSA:3.55.50.10 98 189 7.9E-141 T 12-10-2018 PA257_0112 44f47d65e14fb404463a519fbec6d713 646 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 23 506 2.7E-197 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_0112 44f47d65e14fb404463a519fbec6d713 646 Gene3D G3DSA:2.40.50.230 355 457 3.3E-50 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_0112 44f47d65e14fb404463a519fbec6d713 646 Gene3D G3DSA:2.30.110.50 14 333 7.9E-141 T 12-10-2018 PA257_0112 44f47d65e14fb404463a519fbec6d713 646 SUPERFAMILY SSF69349 442 626 7.77E-42 T 12-10-2018 PA257_0112 44f47d65e14fb404463a519fbec6d713 646 Gene3D G3DSA:3.30.1920.30 224 286 7.9E-141 T 12-10-2018 PA257_0112 44f47d65e14fb404463a519fbec6d713 646 SUPERFAMILY SSF69279 190 363 4.42E-36 T 12-10-2018 PA257_0112 44f47d65e14fb404463a519fbec6d713 646 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 523 6.5E-203 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_0112 44f47d65e14fb404463a519fbec6d713 646 Pfam PF05954 Phage late control gene D protein (GPD) 29 330 1.3E-103 T 12-10-2018 PA257_0112 44f47d65e14fb404463a519fbec6d713 646 SUPERFAMILY SSF69255 365 452 1.15E-35 T 12-10-2018 PA257_0112 44f47d65e14fb404463a519fbec6d713 646 SUPERFAMILY SSF69279 11 184 3.95E-62 T 12-10-2018 PA257_2118 6efdbeea164c49405d96ae5e0579fe53 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 16 232 2.2E-72 T 12-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 PA257_2118 6efdbeea164c49405d96ae5e0579fe53 238 Gene3D G3DSA:3.40.50.1360 15 238 3.2E-64 T 12-10-2018 PA257_2118 6efdbeea164c49405d96ae5e0579fe53 238 SUPERFAMILY SSF100950 14 235 7.67E-54 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_2118 6efdbeea164c49405d96ae5e0579fe53 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 20 228 2.1E-51 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 SMART SM00436 122 217 1.1E-34 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 Pfam PF01751 Toprim domain 3 128 1.9E-16 T 12-10-2018 IPR006171 TOPRIM domain PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 Pfam PF01131 DNA topoisomerase 152 590 2.2E-110 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 3.0E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 3.0E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 3.0E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 522 536 3.0E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 3.0E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 651 5.8E-221 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 621 655 1.5E-9 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 Gene3D G3DSA:1.10.290.10 280 409 4.6E-149 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 SUPERFAMILY SSF56712 1 606 2.49E-177 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 SMART SM00437 271 559 6.0E-64 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 Gene3D G3DSA:2.70.20.10 211 489 4.6E-149 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 SUPERFAMILY SSF57783 619 655 2.89E-9 T 12-10-2018 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 SMART SM00493 1 122 2.4E-23 T 12-10-2018 IPR006171 TOPRIM domain PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 Gene3D G3DSA:1.10.460.10 156 603 4.6E-149 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PA257_5195 aac223d18b3d986b3a90a01694d54d14 674 Gene3D G3DSA:3.40.50.140 1 149 4.3E-50 T 12-10-2018 PA257_3241 8fb9a727e271f41e1efea86fa21fb52c 808 Gene3D G3DSA:2.170.130.10 123 261 2.6E-38 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_3241 8fb9a727e271f41e1efea86fa21fb52c 808 Gene3D G3DSA:3.55.50.30 31 114 2.1E-27 T 12-10-2018 PA257_3241 8fb9a727e271f41e1efea86fa21fb52c 808 Pfam PF07660 Secretin and TonB N terminus short domain 55 104 1.8E-12 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_3241 8fb9a727e271f41e1efea86fa21fb52c 808 Pfam PF07715 TonB-dependent Receptor Plug Domain 146 251 7.5E-22 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_3241 8fb9a727e271f41e1efea86fa21fb52c 808 SUPERFAMILY SSF56935 108 808 2.01E-133 T 12-10-2018 PA257_3241 8fb9a727e271f41e1efea86fa21fb52c 808 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 148 807 7.3E-118 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_3241 8fb9a727e271f41e1efea86fa21fb52c 808 Gene3D G3DSA:2.40.170.20 262 808 6.4E-138 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_3241 8fb9a727e271f41e1efea86fa21fb52c 808 SMART SM00965 55 105 1.2E-11 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_3241 8fb9a727e271f41e1efea86fa21fb52c 808 Pfam PF00593 TonB dependent receptor 323 806 2.5E-61 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_1445 0c062e12e144027fed792b070e73706a 330 Pfam PF03524 Conjugal transfer protein 103 323 2.7E-65 T 12-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX PA257_1445 0c062e12e144027fed792b070e73706a 330 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 104 311 7.6E-90 T 12-10-2018 IPR014142 P-type conjugative transfer protein TrbG PA257_1445 0c062e12e144027fed792b070e73706a 330 Gene3D G3DSA:2.60.40.2500 229 325 7.8E-7 T 12-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily PA257_5745 698b80fc6400b24b19b8cd4096db5b4e 322 Gene3D G3DSA:1.10.600.10 1 322 3.1E-109 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily PA257_5745 698b80fc6400b24b19b8cd4096db5b4e 322 Pfam PF00348 Polyprenyl synthetase 31 273 4.2E-71 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 PA257_5745 698b80fc6400b24b19b8cd4096db5b4e 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site PA257_5745 698b80fc6400b24b19b8cd4096db5b4e 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site PA257_5745 698b80fc6400b24b19b8cd4096db5b4e 322 SUPERFAMILY SSF48576 5 321 1.12E-97 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily PA257_6260 7c18ddf6b75fe5c511132f00c36de864 234 Pfam PF02525 Flavodoxin-like fold 1 207 1.9E-53 T 12-10-2018 IPR003680 Flavodoxin-like fold PA257_6260 7c18ddf6b75fe5c511132f00c36de864 234 Gene3D G3DSA:3.40.50.360 1 232 6.7E-78 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_6260 7c18ddf6b75fe5c511132f00c36de864 234 SUPERFAMILY SSF52218 1 227 7.33E-69 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_5779 8aac5b9e59bac3242de63cb0f02c1363 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 27 256 7.2E-12 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_5779 8aac5b9e59bac3242de63cb0f02c1363 354 SUPERFAMILY SSF111369 18 263 5.23E-75 T 12-10-2018 PA257_5779 8aac5b9e59bac3242de63cb0f02c1363 354 Gene3D G3DSA:2.40.50.100 29 173 7.4E-76 T 12-10-2018 PA257_5779 8aac5b9e59bac3242de63cb0f02c1363 354 Gene3D G3DSA:1.10.287.470 64 137 7.4E-76 T 12-10-2018 PA257_5779 8aac5b9e59bac3242de63cb0f02c1363 354 Gene3D G3DSA:2.40.30.170 23 247 7.4E-76 T 12-10-2018 PA257_5779 8aac5b9e59bac3242de63cb0f02c1363 354 Gene3D G3DSA:2.40.420.20 248 340 3.2E-24 T 12-10-2018 PA257_5779 8aac5b9e59bac3242de63cb0f02c1363 354 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 5 337 3.6E-83 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_5701 3cd8fb610bf442cac7959b625150b4bf 217 SUPERFAMILY SSF52833 21 210 2.5E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_5701 3cd8fb610bf442cac7959b625150b4bf 217 Gene3D G3DSA:3.40.30.10 37 215 1.3E-46 T 12-10-2018 PA257_5701 3cd8fb610bf442cac7959b625150b4bf 217 Pfam PF13462 Thioredoxin 45 199 2.1E-17 T 12-10-2018 IPR012336 Thioredoxin-like fold PA257_4251 18c6394756a1abdf587e5110c270b62c 295 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_4251 18c6394756a1abdf587e5110c270b62c 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4251 18c6394756a1abdf587e5110c270b62c 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4251 18c6394756a1abdf587e5110c270b62c 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4251 18c6394756a1abdf587e5110c270b62c 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4251 18c6394756a1abdf587e5110c270b62c 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4251 18c6394756a1abdf587e5110c270b62c 295 Gene3D G3DSA:3.40.50.720 1 272 9.4E-74 T 12-10-2018 PA257_4251 18c6394756a1abdf587e5110c270b62c 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4251 18c6394756a1abdf587e5110c270b62c 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4251 18c6394756a1abdf587e5110c270b62c 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4251 18c6394756a1abdf587e5110c270b62c 295 SUPERFAMILY SSF51735 1 277 4.12E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4251 18c6394756a1abdf587e5110c270b62c 295 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 9.7E-5 T 12-10-2018 PA257_4251 18c6394756a1abdf587e5110c270b62c 295 Pfam PF00106 short chain dehydrogenase 7 201 2.6E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1555 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 132 172 1.1E-15 T 12-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 PA257_1555 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Gene3D G3DSA:3.30.60.70 132 172 9.4E-23 T 12-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 PA257_1555 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 4 341 44.255 T 12-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 PA257_1555 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Gene3D G3DSA:3.30.70.2010 1 131 3.9E-55 T 12-10-2018 PA257_1555 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 254 286 3.8E-12 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_1555 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 SUPERFAMILY SSF51161 101 306 3.33E-37 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_1555 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 344 6.3E-187 T 12-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 PA257_1555 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Gene3D G3DSA:2.160.10.10 173 344 4.0E-72 T 12-10-2018 PA257_5299 478b9559a874df59efbc534273e15638 301 Pfam PF04116 Fatty acid hydroxylase superfamily 111 244 4.1E-21 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 PA257_4292 f7728d0e85513bf5b30426271a64bab0 260 SUPERFAMILY SSF51658 1 256 7.05E-88 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily PA257_4292 f7728d0e85513bf5b30426271a64bab0 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 5.1E-129 T 12-10-2018 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 PA257_4292 f7728d0e85513bf5b30426271a64bab0 260 PIRSF PIRSF006241 1 260 5.5E-96 T 12-10-2018 IPR026040 Hydroxypyruvate isomerase-like PA257_4292 f7728d0e85513bf5b30426271a64bab0 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 3.8E-34 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PA257_4292 f7728d0e85513bf5b30426271a64bab0 260 Gene3D G3DSA:3.20.20.150 1 258 3.2E-82 T 12-10-2018 PA257_1544 76ee84500a3d07339ff0c3bb8821f5c8 367 Gene3D G3DSA:2.40.420.20 36 351 1.8E-73 T 12-10-2018 PA257_1544 76ee84500a3d07339ff0c3bb8821f5c8 367 Gene3D G3DSA:2.40.30.170 41 279 1.8E-73 T 12-10-2018 PA257_1544 76ee84500a3d07339ff0c3bb8821f5c8 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 6.7E-76 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_1544 76ee84500a3d07339ff0c3bb8821f5c8 367 Gene3D G3DSA:1.10.287.470 91 163 1.8E-73 T 12-10-2018 PA257_1544 76ee84500a3d07339ff0c3bb8821f5c8 367 Gene3D G3DSA:2.40.50.100 57 203 1.8E-73 T 12-10-2018 PA257_1544 76ee84500a3d07339ff0c3bb8821f5c8 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 262 2.5E-20 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_1544 76ee84500a3d07339ff0c3bb8821f5c8 367 SUPERFAMILY SSF111369 47 276 3.53E-24 T 12-10-2018 PA257_6438 34ea8fd09ec03b88f1e03687cdce9cea 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PA257_6438 34ea8fd09ec03b88f1e03687cdce9cea 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 4.4E-65 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PA257_6438 34ea8fd09ec03b88f1e03687cdce9cea 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 43.382 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PA257_6438 34ea8fd09ec03b88f1e03687cdce9cea 197 Gene3D G3DSA:3.30.230.40 92 197 1.1E-38 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 PA257_6438 34ea8fd09ec03b88f1e03687cdce9cea 197 SUPERFAMILY SSF54211 4 88 3.67E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_6438 34ea8fd09ec03b88f1e03687cdce9cea 197 SUPERFAMILY SSF54211 89 181 3.49E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_6438 34ea8fd09ec03b88f1e03687cdce9cea 197 Gene3D G3DSA:3.30.230.40 1 91 2.0E-39 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 PA257_6438 34ea8fd09ec03b88f1e03687cdce9cea 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PA257_4000 3b9635f74e70703d4338465b66d96288 336 Gene3D G3DSA:3.40.50.1820 217 314 1.1E-5 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4000 3b9635f74e70703d4338465b66d96288 336 Gene3D G3DSA:3.40.50.1820 22 202 2.2E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4000 3b9635f74e70703d4338465b66d96288 336 SUPERFAMILY SSF53474 49 313 4.41E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4000 3b9635f74e70703d4338465b66d96288 336 Pfam PF12697 Alpha/beta hydrolase family 58 265 3.8E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_4776 6b5fb4c62a157a79f90a91f74d36efdb 749 Gene3D G3DSA:3.20.20.80 213 725 3.0E-174 T 12-10-2018 PA257_4776 6b5fb4c62a157a79f90a91f74d36efdb 749 SUPERFAMILY SSF51445 379 706 5.39E-33 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_6401 d944d772111c3626cc238dfecce78a66 336 PIRSF PIRSF000904 1 336 1.1E-126 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PA257_6401 d944d772111c3626cc238dfecce78a66 336 SUPERFAMILY SSF56655 2 334 1.09E-116 T 12-10-2018 PA257_6401 d944d772111c3626cc238dfecce78a66 336 PIRSF PIRSF500210 1 336 4.0E-128 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PA257_6401 d944d772111c3626cc238dfecce78a66 336 Gene3D G3DSA:3.40.190.80 200 336 8.5E-55 T 12-10-2018 PA257_6401 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.3E-74 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PA257_6401 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.3E-74 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PA257_6401 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 2.3E-74 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PA257_6401 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 310 335 2.3E-74 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PA257_6401 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.3E-74 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PA257_6401 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 2.3E-74 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PA257_6401 d944d772111c3626cc238dfecce78a66 336 Gene3D G3DSA:3.30.540.10 1 199 5.3E-71 T 12-10-2018 PA257_6401 d944d772111c3626cc238dfecce78a66 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 336 47.094 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PA257_6401 d944d772111c3626cc238dfecce78a66 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 196 1.0E-60 T 12-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 SUPERFAMILY SSF51735 5 258 3.29E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 Gene3D G3DSA:3.40.50.720 3 268 1.9E-66 T 12-10-2018 PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 176 0.0092 T 12-10-2018 PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.1E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.1E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.1E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2008 fef2379fe989a36c1d6e63983bd99d02 270 Pfam PF00106 short chain dehydrogenase 5 190 1.9E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4801 eb5728e4f35fc5241e0ff20ef7ac938b 381 Gene3D G3DSA:1.10.540.10 6 117 7.8E-27 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_4801 eb5728e4f35fc5241e0ff20ef7ac938b 381 SUPERFAMILY SSF47203 228 379 3.06E-18 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_4801 eb5728e4f35fc5241e0ff20ef7ac938b 381 SUPERFAMILY SSF56645 9 239 3.01E-68 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_4801 eb5728e4f35fc5241e0ff20ef7ac938b 381 Gene3D G3DSA:1.20.140.10 233 381 4.6E-32 T 12-10-2018 PA257_4801 eb5728e4f35fc5241e0ff20ef7ac938b 381 Gene3D G3DSA:2.40.110.10 122 232 1.4E-35 T 12-10-2018 PA257_4801 eb5728e4f35fc5241e0ff20ef7ac938b 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 118 1.4E-19 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_4801 eb5728e4f35fc5241e0ff20ef7ac938b 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 216 1.6E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_4801 eb5728e4f35fc5241e0ff20ef7ac938b 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 377 1.9E-16 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_4513 f6c3e56dc0c563926f856086188d3be3 137 Gene3D G3DSA:1.10.10.10 3 136 3.2E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4513 f6c3e56dc0c563926f856086188d3be3 137 Pfam PF12802 MarR family 30 86 7.7E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4513 f6c3e56dc0c563926f856086188d3be3 137 SMART SM00347 24 123 1.4E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4513 f6c3e56dc0c563926f856086188d3be3 137 SUPERFAMILY SSF46785 3 134 2.06E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 936 8.1E-55 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 Pfam PF02779 Transketolase, pyrimidine binding domain 594 788 1.5E-65 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 10 936 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 Gene3D G3DSA:1.10.287.1150 83 165 1.1E-26 T 12-10-2018 PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 Gene3D G3DSA:3.40.50.11610 724 933 6.9E-171 T 12-10-2018 PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 Gene3D G3DSA:3.40.50.970 167 530 4.5E-149 T 12-10-2018 PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 7 45 2.4E-17 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 SMART SM00861 594 787 1.3E-56 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 SUPERFAMILY SSF52518 121 545 1.06E-87 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 Pfam PF00676 Dehydrogenase E1 component 215 520 4.3E-55 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 PIRSF PIRSF000157 1 938 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 Gene3D G3DSA:3.40.50.12470 557 803 6.9E-171 T 12-10-2018 PA257_4198 8c9d7ae257229e51964d679caf288ac2 938 SUPERFAMILY SSF52518 577 794 5.72E-52 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 341 354 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 Pfam PF02954 Bacterial regulatory protein, Fis family 579 615 4.2E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:1.10.8.60 490 564 2.6E-13 T 12-10-2018 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 598 618 3.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 581 598 3.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 SUPERFAMILY SSF46689 528 617 4.78E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:1.10.10.60 578 617 3.9E-10 T 12-10-2018 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:3.40.50.300 306 489 5.6E-56 T 12-10-2018 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 SUPERFAMILY SSF52540 321 559 4.37E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 Pfam PF01590 GAF domain 77 203 4.2E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 SMART SM00382 337 481 1.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 Pfam PF00158 Sigma-54 interaction domain 322 480 1.1E-61 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:3.30.450.40 21 212 1.8E-40 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 529 538 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 SUPERFAMILY SSF55781 69 212 6.21E-10 T 12-10-2018 PA257_0948 2f0342e20e540c20322f2a1b2bcd9b0f 625 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 404 419 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 320 560 2.9E-30 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 25 194 7.0E-18 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 599 679 1.0E-15 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 SUPERFAMILY SSF56003 14 249 1.15E-50 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 PIRSF PIRSF036389 6 731 3.7E-268 T 12-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 Gene3D G3DSA:3.30.365.10 47 188 1.9E-26 T 12-10-2018 PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 SMART SM01008 216 294 3.3E-23 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 Gene3D G3DSA:3.30.365.10 346 442 7.0E-59 T 12-10-2018 PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 Gene3D G3DSA:3.30.365.10 322 556 7.0E-59 T 12-10-2018 PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 Gene3D G3DSA:3.30.365.10 585 727 9.1E-39 T 12-10-2018 PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 Gene3D G3DSA:3.90.1170.50 201 267 9.7E-8 T 12-10-2018 PA257_3869 b5899e4bad6c82c91eda9cf5045c0ec2 731 SUPERFAMILY SSF56003 318 724 2.22E-117 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PA257_6335 a54a28f9eed201302b52ba8cc15f5b80 354 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 353 7.4E-152 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM PA257_6335 a54a28f9eed201302b52ba8cc15f5b80 354 SUPERFAMILY SSF53067 193 352 7.47E-27 T 12-10-2018 PA257_6335 a54a28f9eed201302b52ba8cc15f5b80 354 Gene3D G3DSA:3.30.420.40 189 317 7.0E-86 T 12-10-2018 PA257_6335 a54a28f9eed201302b52ba8cc15f5b80 354 Gene3D G3DSA:3.30.420.40 13 351 7.0E-86 T 12-10-2018 PA257_6335 a54a28f9eed201302b52ba8cc15f5b80 354 Pfam PF11104 Type IV pilus assembly protein PilM; 14 353 3.0E-139 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM PA257_6335 a54a28f9eed201302b52ba8cc15f5b80 354 Gene3D G3DSA:3.30.1490.300 88 147 7.0E-86 T 12-10-2018 PA257_6335 a54a28f9eed201302b52ba8cc15f5b80 354 SUPERFAMILY SSF53067 12 177 1.38E-13 T 12-10-2018 PA257_6335 a54a28f9eed201302b52ba8cc15f5b80 354 PIRSF PIRSF019169 1 354 1.1E-124 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM PA257_6335 a54a28f9eed201302b52ba8cc15f5b80 354 SMART SM00842 12 181 7.9E-5 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 PA257_6425 9c29f040e3abef3ae43085b6f68902c0 272 Pfam PF02517 CAAX protease self-immunity 169 258 1.1E-19 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 PA257_5489 4203539bf1d213292268f21270d8fbe3 282 Gene3D G3DSA:3.30.950.10 113 233 8.8E-41 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PA257_5489 4203539bf1d213292268f21270d8fbe3 282 PIRSF PIRSF005917 1 281 3.5E-101 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 PA257_5489 4203539bf1d213292268f21270d8fbe3 282 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 205 1.7E-29 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PA257_5489 4203539bf1d213292268f21270d8fbe3 282 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 83 94 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 PA257_5489 4203539bf1d213292268f21270d8fbe3 282 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 5 226 36.52 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 PA257_5489 4203539bf1d213292268f21270d8fbe3 282 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 6 277 9.9E-91 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 PA257_5489 4203539bf1d213292268f21270d8fbe3 282 SUPERFAMILY SSF53790 4 224 4.32E-80 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PA257_5489 4203539bf1d213292268f21270d8fbe3 282 Gene3D G3DSA:3.40.1010.10 1 112 2.9E-42 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PA257_2803 03c6f76219412bef5dc08bce94981067 118 Gene3D G3DSA:1.10.720.90 2 55 2.7E-25 T 12-10-2018 PA257_2803 03c6f76219412bef5dc08bce94981067 118 Gene3D G3DSA:1.10.1900.20 56 118 1.5E-28 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2803 03c6f76219412bef5dc08bce94981067 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.018 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2803 03c6f76219412bef5dc08bce94981067 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 2.0E-15 T 12-10-2018 PA257_2803 03c6f76219412bef5dc08bce94981067 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.0E-40 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2803 03c6f76219412bef5dc08bce94981067 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.0E-40 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2803 03c6f76219412bef5dc08bce94981067 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.0E-40 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2803 03c6f76219412bef5dc08bce94981067 118 Pfam PF00453 Ribosomal protein L20 3 109 1.0E-48 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2803 03c6f76219412bef5dc08bce94981067 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2803 03c6f76219412bef5dc08bce94981067 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.6E-51 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2803 03c6f76219412bef5dc08bce94981067 118 SUPERFAMILY SSF74731 3 116 2.75E-49 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_4331 4685bde8b60744c54ea80a64c89dd426 262 SUPERFAMILY SSF52540 1 255 7.15E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4331 4685bde8b60744c54ea80a64c89dd426 262 Gene3D G3DSA:3.40.50.300 1 260 6.9E-61 T 12-10-2018 PA257_4331 4685bde8b60744c54ea80a64c89dd426 262 Pfam PF13614 AAA domain 1 179 1.2E-41 T 12-10-2018 IPR025669 AAA domain PA257_5491 a7385f2af39672a0490fc4c09cc93fcf 81 Pfam PF02021 Uncharacterised protein family UPF0102 5 61 3.7E-12 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 PA257_5491 a7385f2af39672a0490fc4c09cc93fcf 81 SUPERFAMILY SSF52980 2 75 1.11E-9 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PA257_5491 a7385f2af39672a0490fc4c09cc93fcf 81 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 2 80 6.3E-20 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 PA257_5491 a7385f2af39672a0490fc4c09cc93fcf 81 Gene3D G3DSA:3.40.1350.10 1 81 3.3E-19 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 SUPERFAMILY SSF141868 414 647 2.22E-46 T 12-10-2018 IPR035919 EAL domain superfamily PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 390 5.8E-27 T 12-10-2018 IPR000160 GGDEF domain PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 SUPERFAMILY SSF55073 241 391 6.51E-26 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 Pfam PF00563 EAL domain 415 643 3.1E-46 T 12-10-2018 IPR001633 EAL domain PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 Gene3D G3DSA:3.20.20.450 406 647 8.5E-54 T 12-10-2018 IPR035919 EAL domain superfamily PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 Gene3D G3DSA:3.30.70.270 219 397 6.0E-42 T 12-10-2018 PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 SMART SM00304 171 223 8.9E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 Pfam PF00672 HAMP domain 171 219 2.0E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 Gene3D G3DSA:3.30.1040.50 101 151 3.0E-22 T 12-10-2018 PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 389 8.2E-19 T 12-10-2018 IPR000160 GGDEF domain PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 SMART SM00267 225 398 5.1E-31 T 12-10-2018 IPR000160 GGDEF domain PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 SMART SM00052 408 648 3.8E-12 T 12-10-2018 IPR001633 EAL domain PA257_4360 2d087bc2cacec0575954a688ed7fe8ce 650 Pfam PF16448 LapD/MoxY periplasmic domain 23 145 7.3E-41 T 12-10-2018 IPR032244 LapD/MoxY, periplasmic domain PA257_5793 ee0f2330143fd6417530aaa6a26da682 180 Pfam PF00023 Ankyrin repeat 129 159 0.005 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_5793 ee0f2330143fd6417530aaa6a26da682 180 SMART SM00248 29 58 620.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_5793 ee0f2330143fd6417530aaa6a26da682 180 SMART SM00248 128 157 0.48 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_5793 ee0f2330143fd6417530aaa6a26da682 180 SMART SM00248 62 91 0.0063 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_5793 ee0f2330143fd6417530aaa6a26da682 180 SMART SM00248 95 124 34.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_5793 ee0f2330143fd6417530aaa6a26da682 180 SUPERFAMILY SSF48403 33 165 1.87E-31 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily PA257_5793 ee0f2330143fd6417530aaa6a26da682 180 Gene3D G3DSA:1.25.40.20 14 171 1.2E-36 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily PA257_5793 ee0f2330143fd6417530aaa6a26da682 180 Pfam PF13857 Ankyrin repeats (many copies) 51 100 1.1E-7 T 12-10-2018 PA257_1352 aac57ccc09e3f450777ee8e55249554a 258 SUPERFAMILY SSF51161 2 169 9.7E-58 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_1352 aac57ccc09e3f450777ee8e55249554a 258 Gene3D G3DSA:1.10.3130.10 1 66 1.6E-24 T 12-10-2018 PA257_1352 aac57ccc09e3f450777ee8e55249554a 258 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 166 1.7E-80 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 PA257_1352 aac57ccc09e3f450777ee8e55249554a 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 0.0021 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_1352 aac57ccc09e3f450777ee8e55249554a 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 152 1.3E-7 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_1352 aac57ccc09e3f450777ee8e55249554a 258 Gene3D G3DSA:2.160.10.10 67 189 1.2E-38 T 12-10-2018 PA257_1308 dd58c8fc45008fa41337e5e35aa5012b 236 Pfam PF01066 CDP-alcohol phosphatidyltransferase 18 66 5.0E-6 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PA257_1308 dd58c8fc45008fa41337e5e35aa5012b 236 PIRSF PIRSF000851 1 236 3.0E-89 T 12-10-2018 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 PA257_1308 dd58c8fc45008fa41337e5e35aa5012b 236 Gene3D G3DSA:1.20.120.1760 11 179 5.3E-8 T 12-10-2018 PA257_6687 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.50.50.60 100 405 6.4E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6687 80ba7b1828922b7c1092a7f4435af112 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 50.179 T 12-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 PA257_6687 80ba7b1828922b7c1092a7f4435af112 432 Pfam PF01266 FAD dependent oxidoreductase 3 398 1.0E-70 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_6687 80ba7b1828922b7c1092a7f4435af112 432 SUPERFAMILY SSF51905 1 416 2.07E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6687 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.30.9.10 134 362 6.4E-50 T 12-10-2018 PA257_6687 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.50.50.60 1 80 8.0E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6687 80ba7b1828922b7c1092a7f4435af112 432 SUPERFAMILY SSF54373 270 360 1.11E-17 T 12-10-2018 PA257_3365 99221a8d80cfea7e174df13ea199fde7 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 134 7.3E-30 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PA257_3365 99221a8d80cfea7e174df13ea199fde7 156 Gene3D G3DSA:3.40.50.2300 1 135 6.8E-35 T 12-10-2018 PA257_3365 99221a8d80cfea7e174df13ea199fde7 156 SUPERFAMILY SSF52788 1 136 1.44E-36 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily PA257_3365 99221a8d80cfea7e174df13ea199fde7 156 SMART SM00226 1 136 2.2E-54 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PA257_1263 909620bd2ae418ef1c8904a19c123fe9 317 Gene3D G3DSA:2.60.120.1440 102 230 2.2E-16 T 12-10-2018 PA257_1263 909620bd2ae418ef1c8904a19c123fe9 317 PIRSF PIRSF018266 4 316 1.1E-94 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_1263 909620bd2ae418ef1c8904a19c123fe9 317 Pfam PF04773 FecR protein 113 204 2.2E-19 T 12-10-2018 IPR006860 FecR protein PA257_1263 909620bd2ae418ef1c8904a19c123fe9 317 Pfam PF16220 Domain of unknown function (DUF4880) 15 57 4.0E-13 T 12-10-2018 IPR032623 FecR, N-terminal PA257_1356 5100afeb93346c21ace2586330c8ff7e 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.3E-35 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 PA257_1356 5100afeb93346c21ace2586330c8ff7e 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.1E-24 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 PA257_1356 5100afeb93346c21ace2586330c8ff7e 107 SUPERFAMILY SSF89360 1 96 1.83E-31 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PA257_1356 5100afeb93346c21ace2586330c8ff7e 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 PA257_1356 5100afeb93346c21ace2586330c8ff7e 107 Gene3D G3DSA:2.60.300.12 2 107 2.8E-36 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PA257_1356 5100afeb93346c21ace2586330c8ff7e 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.0E-53 T 12-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 PA257_1302 36f8d1a6b41de260a04ecb2b07ea4782 315 SUPERFAMILY SSF51735 6 313 1.04E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1302 36f8d1a6b41de260a04ecb2b07ea4782 315 PIRSF PIRSF001439 1 315 1.5E-51 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 PA257_1302 36f8d1a6b41de260a04ecb2b07ea4782 315 Gene3D G3DSA:3.30.1780.10 11 311 1.0E-62 T 12-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 PA257_1302 36f8d1a6b41de260a04ecb2b07ea4782 315 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 7 309 3.2E-35 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 PA257_1302 36f8d1a6b41de260a04ecb2b07ea4782 315 Gene3D G3DSA:3.40.50.720 126 296 1.0E-62 T 12-10-2018 PA257_2409 6e5a3dc2bfd3e0fd485aba2b146a827b 119 Pfam PF14346 Domain of unknown function (DUF4398) 13 112 1.5E-23 T 12-10-2018 IPR025511 Domain of unknown function DUF4398 PA257_2409 6e5a3dc2bfd3e0fd485aba2b146a827b 119 Gene3D G3DSA:1.20.1270.390 22 119 1.6E-32 T 12-10-2018 PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 6.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.6E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 Gene3D G3DSA:3.40.50.720 1 255 3.4E-78 T 12-10-2018 PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 SUPERFAMILY SSF51735 3 250 1.1E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 192 5.3E-5 T 12-10-2018 PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_3014 d45a94331ff929a7adedc3d559ef2bb2 255 Pfam PF00106 short chain dehydrogenase 7 202 2.3E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 Gene3D G3DSA:3.30.300.30 390 504 4.2E-33 T 12-10-2018 PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 620 989 8.9E-120 T 12-10-2018 IPR010080 Thioester reductase-like domain PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 SUPERFAMILY SSF51735 614 963 4.0E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 SUPERFAMILY SSF56801 6 522 1.26E-137 T 12-10-2018 PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 Pfam PF07993 Male sterility protein 623 866 8.3E-50 T 12-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 Gene3D G3DSA:3.40.50.12780 1 389 1.7E-113 T 12-10-2018 PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 Pfam PF00501 AMP-binding enzyme 10 395 6.4E-82 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 SUPERFAMILY SSF47336 510 576 3.66E-14 T 12-10-2018 IPR036736 ACP-like superfamily PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 Pfam PF00550 Phosphopantetheine attachment site 514 573 8.0E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 Gene3D G3DSA:3.40.50.720 590 988 1.4E-78 T 12-10-2018 PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 534 549 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 SMART SM00823 Phosphopantetheine attachment site 510 579 0.0012 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 Gene3D G3DSA:1.10.1200.10 505 581 1.8E-19 T 12-10-2018 IPR036736 ACP-like superfamily PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 Pfam PF13193 AMP-binding enzyme C-terminal domain 404 482 7.7E-12 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_1070 9e36fcc0e4f74e77a685a3a5436ff5b2 991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 31 419 1.2E-110 T 12-10-2018 IPR010071 Amino acid adenylation domain PA257_3392 3b536ede1e9620a7b1bb872f0e3ee1cc 328 Gene3D G3DSA:3.30.60.140 281 328 4.9E-36 T 12-10-2018 PA257_3392 3b536ede1e9620a7b1bb872f0e3ee1cc 328 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 48 301 1.1E-78 T 12-10-2018 IPR007817 Pyoverdine biosynthesis PA257_3392 3b536ede1e9620a7b1bb872f0e3ee1cc 328 PIRSF PIRSF037196 2 325 4.4E-167 T 12-10-2018 IPR017133 Pyoverdine chromophore biosynthesis protein PvcA PA257_3681 5eede66569e422878ff37a058c20233d 156 Hamap MF_00535 Cyanate hydratase [cynS]. 1 156 77.291 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 SMART SM01116 83 156 1.7E-45 T 12-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 Gene3D G3DSA:1.10.260.40 1 88 9.4E-28 T 12-10-2018 PA257_3681 5eede66569e422878ff37a058c20233d 156 Gene3D G3DSA:3.30.1160.10 89 156 1.0E-33 T 12-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 SUPERFAMILY SSF55234 88 155 2.09E-28 T 12-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 SUPERFAMILY SSF47413 2 85 1.5E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_3681 5eede66569e422878ff37a058c20233d 156 PRINTS PR01693 Cyanase signature 91 105 1.2E-34 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 PRINTS PR01693 Cyanase signature 141 151 1.2E-34 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 PRINTS PR01693 Cyanase signature 22 37 1.2E-34 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 PRINTS PR01693 Cyanase signature 109 125 1.2E-34 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 PRINTS PR01693 Cyanase signature 42 59 1.2E-34 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 Pfam PF02560 Cyanate lyase C-terminal domain 88 154 1.1E-31 T 12-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 TIGRFAM TIGR00673 cynS: cyanase 4 156 1.5E-59 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 PA257_3681 5eede66569e422878ff37a058c20233d 156 PIRSF PIRSF001263 3 156 6.8E-64 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 SUPERFAMILY SSF48452 125 245 3.21E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 Gene3D G3DSA:1.25.40.10 202 289 3.1E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 SUPERFAMILY SSF52833 5 113 7.72E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 Gene3D G3DSA:1.25.40.10 116 201 1.2E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 TIGRFAM TIGR01068 thioredoxin: thioredoxin 13 110 1.7E-30 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 Pfam PF00085 Thioredoxin 9 109 1.8E-27 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 Pfam PF14561 Tetratricopeptide repeat 200 289 4.4E-27 T 12-10-2018 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 Gene3D G3DSA:3.40.30.10 3 112 1.1E-32 T 12-10-2018 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 PRINTS PR00421 Thioredoxin family signature 36 45 1.5E-7 T 12-10-2018 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 PRINTS PR00421 Thioredoxin family signature 28 36 1.5E-7 T 12-10-2018 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 PRINTS PR00421 Thioredoxin family signature 76 87 1.5E-7 T 12-10-2018 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 Pfam PF14559 Tetratricopeptide repeat 129 195 6.9E-12 T 12-10-2018 PA257_1089 8615a25441d3dfe7d6d1a9412b967de2 289 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 357 365 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 SMART SM01060 34 414 2.6E-240 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 PIRSF PIRSF038928 24 503 3.1E-174 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 47 70 1.5E-66 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 109 127 1.5E-66 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 344 370 1.5E-66 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 130 147 1.5E-66 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 149 167 1.5E-66 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 312 339 1.5E-66 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 SUPERFAMILY SSF56634 29 503 1.57E-186 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 Gene3D G3DSA:2.40.180.10 30 513 3.5E-210 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 Pfam PF06628 Catalase-related immune-responsive 436 495 3.3E-11 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 ProSitePatterns PS00438 Catalase proximal active site signature. 70 86 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_5794 4ce70b73173bf71848be4b223e781f2a 513 Pfam PF00199 Catalase 34 411 4.4E-164 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3040 9c8b064c76ebc3abd97bdfc6fcf1e29c 441 SUPERFAMILY SSF111283 1 440 4.45E-73 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 PA257_3040 9c8b064c76ebc3abd97bdfc6fcf1e29c 441 Pfam PF01523 Putative modulator of DNA gyrase 28 301 6.1E-28 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PA257_6910 df8ccfe1a88ad66b77186d0adffb36c9 250 PIRSF PIRSF029730 6 250 5.7E-93 T 12-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 PA257_6910 df8ccfe1a88ad66b77186d0adffb36c9 250 Pfam PF05013 N-formylglutamate amidohydrolase 27 231 5.5E-39 T 12-10-2018 IPR007709 N-formylglutamate amidohydrolase PA257_6910 df8ccfe1a88ad66b77186d0adffb36c9 250 Gene3D G3DSA:3.40.630.40 18 250 7.5E-74 T 12-10-2018 PA257_6910 df8ccfe1a88ad66b77186d0adffb36c9 250 SUPERFAMILY SSF53187 12 250 1.13E-67 T 12-10-2018 PA257_6439 8a89bbaf1c5e3cc687e439944faa3fc3 132 SUPERFAMILY SSF55729 7 125 9.41E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6439 8a89bbaf1c5e3cc687e439944faa3fc3 132 Pfam PF12568 Acetyltransferase (GNAT) domain 2 102 1.2E-31 T 12-10-2018 IPR000182 GNAT domain PA257_6439 8a89bbaf1c5e3cc687e439944faa3fc3 132 Gene3D G3DSA:3.40.630.30 1 127 4.0E-25 T 12-10-2018 PA257_3611 d1c21b7d6e72ee38b0a5933904e36d59 375 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 223 366 1.4E-23 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase PA257_3611 d1c21b7d6e72ee38b0a5933904e36d59 375 Pfam PF04116 Fatty acid hydroxylase superfamily 57 210 2.0E-10 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 PA257_3611 d1c21b7d6e72ee38b0a5933904e36d59 375 SUPERFAMILY SSF55961 223 368 4.89E-19 T 12-10-2018 PA257_3611 d1c21b7d6e72ee38b0a5933904e36d59 375 Gene3D G3DSA:3.30.530.20 222 373 2.9E-18 T 12-10-2018 IPR023393 START-like domain superfamily PA257_1393 fdbf1628a0c2432a839b7a181f7baed6 311 Gene3D G3DSA:3.40.190.290 93 302 1.1E-33 T 12-10-2018 PA257_1393 fdbf1628a0c2432a839b7a181f7baed6 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1393 fdbf1628a0c2432a839b7a181f7baed6 311 SUPERFAMILY SSF53850 93 299 3.74E-33 T 12-10-2018 PA257_1393 fdbf1628a0c2432a839b7a181f7baed6 311 SUPERFAMILY SSF46785 4 109 7.57E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1393 fdbf1628a0c2432a839b7a181f7baed6 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1393 fdbf1628a0c2432a839b7a181f7baed6 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1393 fdbf1628a0c2432a839b7a181f7baed6 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1393 fdbf1628a0c2432a839b7a181f7baed6 311 Gene3D G3DSA:1.10.10.10 1 86 1.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1393 fdbf1628a0c2432a839b7a181f7baed6 311 Pfam PF03466 LysR substrate binding domain 91 298 4.5E-38 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2334 9fe1173620f5ba5a6d6471bd6409fe54 178 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.0E-18 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD PA257_5891 0645b0e6cb2cafa18652a9c85402aa52 520 SUPERFAMILY SSF161098 278 511 1.44E-31 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5891 0645b0e6cb2cafa18652a9c85402aa52 520 Gene3D G3DSA:1.10.3720.10 278 518 4.8E-33 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5891 0645b0e6cb2cafa18652a9c85402aa52 520 SUPERFAMILY SSF161098 16 258 3.14E-43 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5891 0645b0e6cb2cafa18652a9c85402aa52 520 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 248 1.2E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_5891 0645b0e6cb2cafa18652a9c85402aa52 520 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 341 504 5.7E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_5891 0645b0e6cb2cafa18652a9c85402aa52 520 Gene3D G3DSA:1.10.3720.10 20 255 6.5E-50 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6405 9df2bd2986777fd133ba364f8fd14dd3 1201 Pfam PF10101 Predicted membrane protein (DUF2339) 178 533 9.1E-105 T 12-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane PA257_6405 9df2bd2986777fd133ba364f8fd14dd3 1201 Pfam PF10101 Predicted membrane protein (DUF2339) 785 1188 4.1E-44 T 12-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane PA257_0216 2161b4ac421a51f37db9218a9c9e6e16 305 Pfam PF03466 LysR substrate binding domain 89 296 2.0E-31 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0216 2161b4ac421a51f37db9218a9c9e6e16 305 SUPERFAMILY SSF46785 1 86 1.26E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0216 2161b4ac421a51f37db9218a9c9e6e16 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0216 2161b4ac421a51f37db9218a9c9e6e16 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0216 2161b4ac421a51f37db9218a9c9e6e16 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0216 2161b4ac421a51f37db9218a9c9e6e16 305 Gene3D G3DSA:3.40.190.10 93 287 2.6E-30 T 12-10-2018 PA257_0216 2161b4ac421a51f37db9218a9c9e6e16 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.2E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0216 2161b4ac421a51f37db9218a9c9e6e16 305 Gene3D G3DSA:3.40.190.10 166 270 2.6E-30 T 12-10-2018 PA257_0216 2161b4ac421a51f37db9218a9c9e6e16 305 SUPERFAMILY SSF53850 91 297 2.02E-31 T 12-10-2018 PA257_0216 2161b4ac421a51f37db9218a9c9e6e16 305 Gene3D G3DSA:1.10.10.10 1 92 4.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 Pfam PF00710 Asparaginase, N-terminal 7 182 3.3E-46 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 PIRSF PIRSF500176 3 324 8.7E-95 T 12-10-2018 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 PIRSF PIRSF001220 1 326 1.1E-83 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 SUPERFAMILY SSF53774 3 326 8.9E-88 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 Gene3D G3DSA:3.40.50.40 201 327 2.4E-32 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 9 17 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 Gene3D G3DSA:3.40.50.1170 4 191 2.9E-53 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 86 96 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 SMART SM00870 6 315 1.9E-96 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 PRINTS PR00139 Asparaginase/glutaminase family signature 85 103 1.7E-11 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 PRINTS PR00139 Asparaginase/glutaminase family signature 252 270 1.7E-11 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PA257_3393 a0da3ef1be6f8a67ff07f3567bbbffb5 328 PRINTS PR00139 Asparaginase/glutaminase family signature 7 18 1.7E-11 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PA257_0143 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SUPERFAMILY SSF48008 88 218 2.88E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_0143 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SUPERFAMILY SSF46785 3 74 6.27E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0143 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Gene3D G3DSA:1.10.10.10 2 75 1.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0143 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Gene3D G3DSA:1.20.120.530 84 218 8.4E-30 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_0143 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SMART SM00345 11 70 1.7E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0143 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 3.8E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0143 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 3.8E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0143 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SMART SM00895 90 214 1.9E-21 T 12-10-2018 IPR011711 GntR, C-terminal PA257_0143 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 4.2E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0143 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Pfam PF07729 FCD domain 90 213 2.0E-28 T 12-10-2018 IPR011711 GntR, C-terminal PA257_5521 525c346d72a8e5b47a4f6e03a350fbe1 215 Pfam PF05494 MlaC protein 33 195 4.5E-43 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PA257_5521 525c346d72a8e5b47a4f6e03a350fbe1 215 PIRSF PIRSF004649 1 210 3.3E-59 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PA257_5521 525c346d72a8e5b47a4f6e03a350fbe1 215 Gene3D G3DSA:3.10.450.710 22 205 5.5E-64 T 12-10-2018 PA257_2183 ef9293a9cd0a539382f03a4ca3f164e7 211 SUPERFAMILY SSF51366 5 205 1.37E-61 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PA257_2183 ef9293a9cd0a539382f03a4ca3f164e7 211 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 206 41.722 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 PA257_2183 ef9293a9cd0a539382f03a4ca3f164e7 211 Gene3D G3DSA:3.20.20.70 2 208 7.6E-66 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2183 ef9293a9cd0a539382f03a4ca3f164e7 211 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 201 1.1E-44 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 PA257_1200 86f8cd1b3403f8cd867866d6abd91a23 364 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 8 356 2.7E-193 T 12-10-2018 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG KEGG: 00920+1.14.14.35|MetaCyc: PWY-6059 PA257_1200 86f8cd1b3403f8cd867866d6abd91a23 364 Gene3D G3DSA:3.20.20.30 5 359 3.4E-109 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_1200 86f8cd1b3403f8cd867866d6abd91a23 364 SUPERFAMILY SSF51679 5 355 8.77E-95 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_1200 86f8cd1b3403f8cd867866d6abd91a23 364 Pfam PF00296 Luciferase-like monooxygenase 9 328 4.1E-78 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_6053 f16082e3b2dda0da18c40de0e7d9a1ad 736 Pfam PF13550 Putative phage tail protein 213 358 1.0E-9 T 12-10-2018 IPR032876 Tip attachment protein J PA257_0359 591ee3aba32d0d994c122ff495812d6e 292 Gene3D G3DSA:3.60.110.10 1 290 4.2E-110 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_0359 591ee3aba32d0d994c122ff495812d6e 292 SUPERFAMILY SSF56317 3 283 8.76E-84 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_0359 591ee3aba32d0d994c122ff495812d6e 292 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 1.8E-147 T 12-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 PA257_0359 591ee3aba32d0d994c122ff495812d6e 292 Pfam PF00795 Carbon-nitrogen hydrolase 6 266 4.5E-53 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PA257_4765 2367c5cd9dd00243e470d399ef0db6d9 499 Pfam PF00361 Proton-conducting membrane transporter 124 417 6.3E-41 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_4765 2367c5cd9dd00243e470d399ef0db6d9 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 232 256 1.2E-12 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_4765 2367c5cd9dd00243e470d399ef0db6d9 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 159 183 1.2E-12 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_4765 2367c5cd9dd00243e470d399ef0db6d9 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 129 148 1.2E-12 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_4765 2367c5cd9dd00243e470d399ef0db6d9 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 1.2E-12 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_5245 d1988a7a2d5eeb916a0a2227c63c1f3f 246 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 92 111 - T 12-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 PA257_5245 d1988a7a2d5eeb916a0a2227c63c1f3f 246 ProSitePatterns PS00744 Beta-lactamases class B signature 2. 167 179 - T 12-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 PA257_5245 d1988a7a2d5eeb916a0a2227c63c1f3f 246 SMART SM00849 52 215 5.5E-19 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_5245 d1988a7a2d5eeb916a0a2227c63c1f3f 246 SUPERFAMILY SSF56281 25 230 1.35E-46 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_5245 d1988a7a2d5eeb916a0a2227c63c1f3f 246 Gene3D G3DSA:3.60.15.10 19 246 8.4E-103 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_5245 d1988a7a2d5eeb916a0a2227c63c1f3f 246 Pfam PF00753 Metallo-beta-lactamase superfamily 87 215 3.4E-5 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_0048 fff95ed1e230e58aefce34036f943fa9 71 Gene3D G3DSA:3.30.1660.10 3 71 1.8E-34 T 12-10-2018 IPR025543 Dodecin-like PA257_0048 fff95ed1e230e58aefce34036f943fa9 71 SUPERFAMILY SSF89807 6 69 1.44E-27 T 12-10-2018 IPR036694 Dodecin-like superfamily PA257_0048 fff95ed1e230e58aefce34036f943fa9 71 Pfam PF07311 Dodecin 6 68 3.1E-31 T 12-10-2018 IPR009923 Dodecin PA257_4672 d3843a4ca62d55c7cf170a03ea94aea9 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 97 2.2E-9 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_4672 d3843a4ca62d55c7cf170a03ea94aea9 338 SUPERFAMILY SSF51735 121 298 5.96E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4672 d3843a4ca62d55c7cf170a03ea94aea9 338 SUPERFAMILY SSF50129 11 150 7.15E-39 T 12-10-2018 IPR011032 GroES-like superfamily PA257_4672 d3843a4ca62d55c7cf170a03ea94aea9 338 Gene3D G3DSA:3.40.50.720 130 273 3.2E-104 T 12-10-2018 PA257_4672 d3843a4ca62d55c7cf170a03ea94aea9 338 Pfam PF13602 Zinc-binding dehydrogenase 194 334 9.2E-26 T 12-10-2018 PA257_4672 d3843a4ca62d55c7cf170a03ea94aea9 338 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 335 8.3E-144 T 12-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 PA257_4672 d3843a4ca62d55c7cf170a03ea94aea9 338 SMART SM00829 20 334 3.6E-56 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_4672 d3843a4ca62d55c7cf170a03ea94aea9 338 Gene3D G3DSA:3.90.180.10 23 334 3.2E-104 T 12-10-2018 PA257_3843 6c0394fde8e2690c49765f7e901c3556 278 SUPERFAMILY SSF54506 2 277 2.27E-67 T 12-10-2018 PA257_3843 6c0394fde8e2690c49765f7e901c3556 278 PIRSF PIRSF016184 1 278 1.8E-81 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_3843 6c0394fde8e2690c49765f7e901c3556 278 Gene3D G3DSA:3.10.310.10 7 119 1.1E-97 T 12-10-2018 PA257_3843 6c0394fde8e2690c49765f7e901c3556 278 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 273 1.0E-55 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_3843 6c0394fde8e2690c49765f7e901c3556 278 Pfam PF02567 Phenazine biosynthesis-like protein 7 274 6.3E-85 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_3843 6c0394fde8e2690c49765f7e901c3556 278 Gene3D G3DSA:3.10.310.10 120 266 1.1E-97 T 12-10-2018 PA257_3854 fc918509028ca8f684ce3c248229615e 207 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 110 196 5.9E-10 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PA257_3854 fc918509028ca8f684ce3c248229615e 207 Gene3D G3DSA:2.60.120.620 19 197 1.4E-17 T 12-10-2018 PA257_4803 69d0bdd1361a87ca3e99515e497c7234 354 Gene3D G3DSA:2.40.110.10 129 205 4.4E-5 T 12-10-2018 PA257_4803 69d0bdd1361a87ca3e99515e497c7234 354 SUPERFAMILY SSF56645 13 197 2.36E-13 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_4803 69d0bdd1361a87ca3e99515e497c7234 354 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 90 1.7E-6 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_4803 69d0bdd1361a87ca3e99515e497c7234 354 Gene3D G3DSA:1.10.540.10 10 108 4.9E-13 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_4803 69d0bdd1361a87ca3e99515e497c7234 354 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 203 341 6.4E-28 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_4803 69d0bdd1361a87ca3e99515e497c7234 354 SUPERFAMILY SSF47203 205 349 2.9E-35 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_4803 69d0bdd1361a87ca3e99515e497c7234 354 Gene3D G3DSA:1.20.140.10 206 352 4.7E-35 T 12-10-2018 PA257_3470 6db7b029fe9758ac5635fcb84b4988dd 438 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 22 297 1.1E-70 T 12-10-2018 IPR031009 Three-Cys-motif partner protein PA257_1398 e55323a52302e7a7e1ca220d4eef049e 385 Gene3D G3DSA:1.20.1250.20 14 383 1.7E-26 T 12-10-2018 PA257_1398 e55323a52302e7a7e1ca220d4eef049e 385 Pfam PF07690 Major Facilitator Superfamily 32 325 3.3E-10 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1398 e55323a52302e7a7e1ca220d4eef049e 385 SUPERFAMILY SSF103473 18 385 1.15E-33 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6832 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 SUPERFAMILY SSF89000 302 452 1.61E-51 T 12-10-2018 PA257_6832 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 Pfam PF00364 Biotin-requiring enzyme 540 605 2.4E-17 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_6832 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 SUPERFAMILY SSF51230 532 605 2.36E-21 T 12-10-2018 IPR011053 Single hybrid motif PA257_6832 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 Pfam PF02436 Conserved carboxylase domain 297 488 7.0E-57 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 PA257_6832 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 Gene3D G3DSA:2.40.50.100 530 606 4.2E-25 T 12-10-2018 PA257_6832 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 SUPERFAMILY SSF51569 5 305 6.04E-90 T 12-10-2018 PA257_6832 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 12 602 9.0E-257 T 12-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 PA257_6832 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 Pfam PF00682 HMGL-like 12 273 1.1E-50 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PA257_6832 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 Gene3D G3DSA:3.20.20.70 1 461 1.2E-173 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4908 60507205f09995f904939f536e07f3da 299 TIGRFAM TIGR01138 cysM: cysteine synthase B 7 296 8.5E-171 T 12-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 PA257_4908 60507205f09995f904939f536e07f3da 299 Gene3D G3DSA:3.40.50.1100 39 144 1.3E-110 T 12-10-2018 PA257_4908 60507205f09995f904939f536e07f3da 299 SUPERFAMILY SSF53686 5 294 2.23E-90 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_4908 60507205f09995f904939f536e07f3da 299 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PA257_4908 60507205f09995f904939f536e07f3da 299 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 296 1.3E-124 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 PA257_4908 60507205f09995f904939f536e07f3da 299 Gene3D G3DSA:3.40.50.1100 12 292 1.3E-110 T 12-10-2018 PA257_4908 60507205f09995f904939f536e07f3da 299 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 285 2.6E-68 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_6626 8993de498dfad04ad14320ed6368f580 77 Pfam PF06146 Phosphate-starvation-inducible E 7 71 3.5E-15 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like PA257_6626 8993de498dfad04ad14320ed6368f580 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 1.6E-44 T 12-10-2018 IPR013468 Conserved hypothetical protein CHP02647 PA257_5822 16dc25a2749de6a91d50bc81fef7617d 386 Pfam PF01553 Acyltransferase 90 210 2.8E-8 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_5822 16dc25a2749de6a91d50bc81fef7617d 386 SUPERFAMILY SSF69593 89 239 3.92E-6 T 12-10-2018 PA257_4770 e651a33e860557330a6134adba01ecf3 381 Gene3D G3DSA:3.40.50.10350 1 361 2.6E-142 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold PA257_4770 e651a33e860557330a6134adba01ecf3 381 Gene3D G3DSA:3.90.1510.10 42 275 2.6E-142 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 PA257_4770 e651a33e860557330a6134adba01ecf3 381 SUPERFAMILY SSF110738 1 374 4.05E-136 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 PA257_4770 e651a33e860557330a6134adba01ecf3 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 1.7E-162 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PA257_4770 e651a33e860557330a6134adba01ecf3 381 PIRSF PIRSF006078 1 377 6.8E-135 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PA257_4770 e651a33e860557330a6134adba01ecf3 381 Pfam PF02595 Glycerate kinase family 3 372 1.2E-149 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PA257_1044 38dd4795bf63ca0e282a91bf172fbb6e 414 Pfam PF01966 HD domain 158 279 3.0E-15 T 12-10-2018 IPR006674 HD domain PA257_1044 38dd4795bf63ca0e282a91bf172fbb6e 414 Pfam PF11871 Domain of unknown function (DUF3391) 2 125 3.8E-34 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 PA257_1044 38dd4795bf63ca0e282a91bf172fbb6e 414 SMART SM00471 153 289 1.0E-11 T 12-10-2018 IPR003607 HD/PDEase domain PA257_1044 38dd4795bf63ca0e282a91bf172fbb6e 414 SUPERFAMILY SSF109604 150 317 2.09E-33 T 12-10-2018 PA257_1044 38dd4795bf63ca0e282a91bf172fbb6e 414 Gene3D G3DSA:1.10.3210.10 27 320 1.7E-75 T 12-10-2018 PA257_1044 38dd4795bf63ca0e282a91bf172fbb6e 414 TIGRFAM TIGR00277 HDIG: HDIG domain 155 246 2.1E-8 T 12-10-2018 IPR006675 HDIG domain PA257_6753 7d070021436ec11157a2f8f0abb1a74c 242 Pfam PF01895 PhoU domain 27 113 3.4E-22 T 12-10-2018 IPR026022 PhoU domain PA257_6753 7d070021436ec11157a2f8f0abb1a74c 242 Pfam PF01895 PhoU domain 131 214 4.6E-18 T 12-10-2018 IPR026022 PhoU domain PA257_6753 7d070021436ec11157a2f8f0abb1a74c 242 PIRSF PIRSF003107 8 229 1.8E-80 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PA257_6753 7d070021436ec11157a2f8f0abb1a74c 242 SUPERFAMILY SSF109755 13 234 1.99E-72 T 12-10-2018 PA257_6753 7d070021436ec11157a2f8f0abb1a74c 242 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 224 1.5E-79 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PA257_6753 7d070021436ec11157a2f8f0abb1a74c 242 Gene3D G3DSA:1.20.58.220 1 123 2.8E-49 T 12-10-2018 IPR038078 PhoU-like domain superfamily PA257_6753 7d070021436ec11157a2f8f0abb1a74c 242 Gene3D G3DSA:1.20.58.220 124 239 1.8E-34 T 12-10-2018 IPR038078 PhoU-like domain superfamily PA257_6680 4113c9aabec1a5ef6e9c27819ac5a0b7 572 SUPERFAMILY SSF52518 357 558 9.9E-56 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_6680 4113c9aabec1a5ef6e9c27819ac5a0b7 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PA257_6680 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 170 2.4E-41 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PA257_6680 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Gene3D G3DSA:3.40.50.970 348 572 5.9E-60 T 12-10-2018 PA257_6680 4113c9aabec1a5ef6e9c27819ac5a0b7 572 SUPERFAMILY SSF52518 4 182 1.1E-44 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_6680 4113c9aabec1a5ef6e9c27819ac5a0b7 572 SUPERFAMILY SSF52467 181 346 1.17E-41 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_6680 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Gene3D G3DSA:3.40.50.1220 177 332 1.6E-47 T 12-10-2018 PA257_6680 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 318 1.4E-29 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PA257_6680 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Gene3D G3DSA:3.40.50.970 2 175 4.1E-51 T 12-10-2018 PA257_6680 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 1.8E-36 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PA257_6681 62c28b87f8b64d690197b33f6ebb4102 190 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 188 1.9E-83 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 PA257_6681 62c28b87f8b64d690197b33f6ebb4102 190 Pfam PF00156 Phosphoribosyl transferase domain 31 156 1.2E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PA257_6681 62c28b87f8b64d690197b33f6ebb4102 190 Gene3D G3DSA:3.40.50.2020 3 188 7.4E-53 T 12-10-2018 PA257_6681 62c28b87f8b64d690197b33f6ebb4102 190 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 40.963 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 PA257_6681 62c28b87f8b64d690197b33f6ebb4102 190 SUPERFAMILY SSF53271 2 188 2.41E-45 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like PA257_2367 c706b7e707a7174b6932c11bd0df2a57 337 Gene3D G3DSA:3.40.50.300 5 169 8.7E-49 T 12-10-2018 PA257_2367 c706b7e707a7174b6932c11bd0df2a57 337 Pfam PF07728 AAA domain (dynein-related subfamily) 33 163 2.5E-12 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PA257_2367 c706b7e707a7174b6932c11bd0df2a57 337 Gene3D G3DSA:1.10.8.80 215 292 2.0E-21 T 12-10-2018 PA257_2367 c706b7e707a7174b6932c11bd0df2a57 337 SUPERFAMILY SSF52540 6 283 5.73E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2367 c706b7e707a7174b6932c11bd0df2a57 337 SMART SM00382 30 192 4.1E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4863 af6ee7b70925952f340c508ad234af5b 274 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 1 273 18.832 T 12-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 PA257_4863 af6ee7b70925952f340c508ad234af5b 274 SUPERFAMILY SSF48452 150 265 3.8E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4863 af6ee7b70925952f340c508ad234af5b 274 Gene3D G3DSA:1.25.40.10 154 274 3.9E-30 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4863 af6ee7b70925952f340c508ad234af5b 274 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 153 270 1.2E-41 T 12-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal PA257_4863 af6ee7b70925952f340c508ad234af5b 274 Pfam PF16331 TolA binding protein trimerisation 61 116 4.4E-12 T 12-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 PA257_4863 af6ee7b70925952f340c508ad234af5b 274 Pfam PF13525 Outer membrane lipoprotein 153 274 6.2E-10 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like PA257_4863 af6ee7b70925952f340c508ad234af5b 274 Gene3D G3DSA:1.20.5.110 56 121 3.2E-6 T 12-10-2018 PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 Gene3D G3DSA:3.30.190.20 130 239 5.8E-245 T 12-10-2018 PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 Gene3D G3DSA:3.40.50.300 6 595 5.8E-245 T 12-10-2018 PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 SUPERFAMILY SSF52540 612 910 1.22E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 Gene3D G3DSA:1.20.1580.10 90 492 5.8E-245 T 12-10-2018 PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.869 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 SUPERFAMILY SSF52540 7 569 4.28E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 Gene3D G3DSA:1.10.8.280 288 403 5.8E-245 T 12-10-2018 PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 Gene3D G3DSA:3.40.50.300 616 936 1.3E-139 T 12-10-2018 PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 Gene3D G3DSA:1.20.1580.10 692 830 1.3E-139 T 12-10-2018 PA257_0861 6017755c7e28ce39d514711c5e5cfe9e 945 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4646 cf464395d17eb18577ea2754a1031a27 267 Gene3D G3DSA:3.40.50.150 1 266 5.7E-69 T 12-10-2018 PA257_4646 cf464395d17eb18577ea2754a1031a27 267 PIRSF PIRSF018249 1 267 3.6E-82 T 12-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 PA257_4646 cf464395d17eb18577ea2754a1031a27 267 Pfam PF13649 Methyltransferase domain 86 168 6.0E-11 T 12-10-2018 PA257_4646 cf464395d17eb18577ea2754a1031a27 267 SUPERFAMILY SSF53335 1 249 2.52E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 SUPERFAMILY SSF56059 89 350 1.61E-69 T 12-10-2018 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 Gene3D G3DSA:2.40.50.100 584 655 5.3E-27 T 12-10-2018 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 SMART SM00878 342 449 1.8E-56 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 Pfam PF00289 Biotin carboxylase, N-terminal domain 8 116 8.5E-42 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 Gene3D G3DSA:3.40.50.20 1 135 2.0E-54 T 12-10-2018 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 328 2.9E-79 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 Gene3D G3DSA:3.30.470.20 210 445 4.8E-112 T 12-10-2018 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 SUPERFAMILY SSF51230 573 650 5.89E-22 T 12-10-2018 IPR011053 Single hybrid motif PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 SUPERFAMILY SSF51246 337 454 4.55E-40 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 Pfam PF02785 Biotin carboxylase C-terminal domain 342 449 1.5E-37 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 SUPERFAMILY SSF52440 3 119 2.52E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 Pfam PF00364 Biotin-requiring enzyme 586 650 3.0E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 Gene3D G3DSA:3.30.1490.20 137 208 3.6E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_3727 ee727ba94fbb1069d51aa9a2fc8522c3 655 Gene3D G3DSA:3.30.700.40 446 570 2.3E-64 T 12-10-2018 PA257_5455 f54b0cc98581163a7661f0f752a68226 252 Gene3D G3DSA:3.40.50.720 1 252 1.6E-74 T 12-10-2018 PA257_5455 f54b0cc98581163a7661f0f752a68226 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_5455 f54b0cc98581163a7661f0f752a68226 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_5455 f54b0cc98581163a7661f0f752a68226 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_5455 f54b0cc98581163a7661f0f752a68226 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_5455 f54b0cc98581163a7661f0f752a68226 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_5455 f54b0cc98581163a7661f0f752a68226 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_5455 f54b0cc98581163a7661f0f752a68226 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 2.5E-55 T 12-10-2018 PA257_5455 f54b0cc98581163a7661f0f752a68226 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 4.0E-5 T 12-10-2018 PA257_5455 f54b0cc98581163a7661f0f752a68226 252 SUPERFAMILY SSF51735 4 250 3.85E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5455 f54b0cc98581163a7661f0f752a68226 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_5455 f54b0cc98581163a7661f0f752a68226 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_5455 f54b0cc98581163a7661f0f752a68226 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0840 3cab79791998fd7a72b4a131eb8f6227 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.3E-21 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0840 3cab79791998fd7a72b4a131eb8f6227 63 Gene3D G3DSA:1.10.287.310 1 62 1.5E-28 T 12-10-2018 PA257_0840 3cab79791998fd7a72b4a131eb8f6227 63 Pfam PF00831 Ribosomal L29 protein 4 59 3.1E-23 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0840 3cab79791998fd7a72b4a131eb8f6227 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.891 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0840 3cab79791998fd7a72b4a131eb8f6227 63 SUPERFAMILY SSF46561 1 61 1.44E-21 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0840 3cab79791998fd7a72b4a131eb8f6227 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_5996 c8610119d928f3844cdcc224223d704c 477 SMART SM00387 348 459 1.2E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5996 c8610119d928f3844cdcc224223d704c 477 Gene3D G3DSA:1.10.287.130 190 303 1.5E-17 T 12-10-2018 PA257_5996 c8610119d928f3844cdcc224223d704c 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 303 4.4E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5996 c8610119d928f3844cdcc224223d704c 477 SUPERFAMILY SSF55874 293 461 1.15E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5996 c8610119d928f3844cdcc224223d704c 477 Gene3D G3DSA:3.30.565.10 304 457 2.4E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5996 c8610119d928f3844cdcc224223d704c 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 7.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5996 c8610119d928f3844cdcc224223d704c 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 7.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5996 c8610119d928f3844cdcc224223d704c 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 7.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5996 c8610119d928f3844cdcc224223d704c 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 7.8E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5996 c8610119d928f3844cdcc224223d704c 477 SUPERFAMILY SSF47384 222 303 1.2E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_5996 c8610119d928f3844cdcc224223d704c 477 SMART SM00388 239 304 2.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5996 c8610119d928f3844cdcc224223d704c 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 458 1.2E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3190 f7dcdf8f3c395325a674f80261085c5c 666 Gene3D G3DSA:3.30.479.30 427 537 1.4E-5 T 12-10-2018 PA257_3190 f7dcdf8f3c395325a674f80261085c5c 666 SMART SM00244 330 535 2.9E-4 T 12-10-2018 IPR001107 Band 7 domain PA257_3190 f7dcdf8f3c395325a674f80261085c5c 666 SUPERFAMILY SSF117892 431 540 4.71E-11 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily PA257_3190 f7dcdf8f3c395325a674f80261085c5c 666 Pfam PF01145 SPFH domain / Band 7 family 334 552 4.5E-38 T 12-10-2018 IPR001107 Band 7 domain PA257_0395 657fa120c2a40f8d73402e7a58f39aff 323 Gene3D G3DSA:2.40.50.940 201 319 8.0E-10 T 12-10-2018 PA257_0395 657fa120c2a40f8d73402e7a58f39aff 323 Gene3D G3DSA:2.40.50.140 255 313 8.0E-10 T 12-10-2018 PA257_0395 657fa120c2a40f8d73402e7a58f39aff 323 ProSitePatterns PS00211 ABC transporters family signature. 113 127 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0395 657fa120c2a40f8d73402e7a58f39aff 323 Pfam PF08402 TOBE domain 248 321 5.1E-16 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PA257_0395 657fa120c2a40f8d73402e7a58f39aff 323 SUPERFAMILY SSF50331 215 321 2.07E-14 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_0395 657fa120c2a40f8d73402e7a58f39aff 323 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 13 321 7.1E-108 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PA257_0395 657fa120c2a40f8d73402e7a58f39aff 323 Pfam PF00005 ABC transporter 1 139 9.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0395 657fa120c2a40f8d73402e7a58f39aff 323 SUPERFAMILY SSF52540 1 219 2.43E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0395 657fa120c2a40f8d73402e7a58f39aff 323 SMART SM00382 7 190 1.7E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0395 657fa120c2a40f8d73402e7a58f39aff 323 Gene3D G3DSA:3.40.50.300 1 200 2.4E-64 T 12-10-2018 PA257_4653 cfe5084716fe77040069c0b90e114ec7 415 PIRSF PIRSF000355 64 415 3.4E-142 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4653 cfe5084716fe77040069c0b90e114ec7 415 SUPERFAMILY SSF47240 56 388 5.73E-98 T 12-10-2018 IPR009078 Ferritin-like superfamily PA257_4653 cfe5084716fe77040069c0b90e114ec7 415 Pfam PF00268 Ribonucleotide reductase, small chain 95 382 1.1E-85 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_4653 cfe5084716fe77040069c0b90e114ec7 415 Gene3D G3DSA:1.10.620.20 73 408 3.4E-111 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 PA257_6201 fa752ba998c90bd70d52744650d0cdd2 148 TIGRFAM TIGR02695 azurin: azurin 23 147 1.5E-62 T 12-10-2018 IPR014068 Azurin PA257_6201 fa752ba998c90bd70d52744650d0cdd2 148 SUPERFAMILY SSF49503 21 147 1.81E-48 T 12-10-2018 IPR008972 Cupredoxin PA257_6201 fa752ba998c90bd70d52744650d0cdd2 148 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 148 2.6E-32 T 12-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 PA257_6201 fa752ba998c90bd70d52744650d0cdd2 148 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 125 141 - T 12-10-2018 IPR028871 Blue (type 1) copper protein, binding site PA257_6201 fa752ba998c90bd70d52744650d0cdd2 148 Gene3D G3DSA:2.60.40.420 21 148 5.5E-48 T 12-10-2018 IPR008972 Cupredoxin PA257_6201 fa752ba998c90bd70d52744650d0cdd2 148 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 146 5.0E-67 T 12-10-2018 PA257_0224 ee1d323c6b52770bca4efcaf3ed47542 105 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 14 97 1.7E-35 T 12-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 PA257_3385 76b762b7a45b3fcbfdb237512814f9a9 340 Gene3D G3DSA:3.40.50.2300 74 318 6.4E-56 T 12-10-2018 PA257_3385 76b762b7a45b3fcbfdb237512814f9a9 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 72 331 3.4E-22 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain PA257_3385 76b762b7a45b3fcbfdb237512814f9a9 340 SUPERFAMILY SSF47413 11 70 9.38E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_3385 76b762b7a45b3fcbfdb237512814f9a9 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 59 1.1E-12 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PA257_3385 76b762b7a45b3fcbfdb237512814f9a9 340 SUPERFAMILY SSF53822 69 330 1.51E-60 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_3385 76b762b7a45b3fcbfdb237512814f9a9 340 SMART SM00354 11 82 3.2E-25 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PA257_3385 76b762b7a45b3fcbfdb237512814f9a9 340 Gene3D G3DSA:1.10.260.40 11 70 1.9E-18 T 12-10-2018 PA257_3385 76b762b7a45b3fcbfdb237512814f9a9 340 Gene3D G3DSA:3.40.50.2300 168 297 6.4E-56 T 12-10-2018 PA257_3518 24b0a72e60ecd029c59238478efb18b9 319 Pfam PF04909 Amidohydrolase 10 300 1.9E-39 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_3518 24b0a72e60ecd029c59238478efb18b9 319 Gene3D G3DSA:3.20.20.140 7 308 1.5E-76 T 12-10-2018 PA257_3518 24b0a72e60ecd029c59238478efb18b9 319 SUPERFAMILY SSF51556 8 300 4.0E-46 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_6659 70534acb702c4a36b38292757ed85975 319 SUPERFAMILY SSF56059 112 313 5.2E-21 T 12-10-2018 PA257_6659 70534acb702c4a36b38292757ed85975 319 Gene3D G3DSA:3.30.470.20 203 314 3.0E-25 T 12-10-2018 PA257_6659 70534acb702c4a36b38292757ed85975 319 Pfam PF08443 RimK-like ATP-grasp domain 120 310 7.1E-7 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 PA257_3078 a014842ba3f3c4f50e9d3546428ecdf0 472 SUPERFAMILY SSF56954 12 470 6.41E-102 T 12-10-2018 PA257_3078 a014842ba3f3c4f50e9d3546428ecdf0 472 Gene3D G3DSA:1.20.1600.10 58 468 2.5E-154 T 12-10-2018 PA257_3078 a014842ba3f3c4f50e9d3546428ecdf0 472 Gene3D G3DSA:2.20.200.10 105 356 2.5E-154 T 12-10-2018 PA257_3078 a014842ba3f3c4f50e9d3546428ecdf0 472 Pfam PF02321 Outer membrane efflux protein 68 256 2.9E-23 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_3078 a014842ba3f3c4f50e9d3546428ecdf0 472 Pfam PF02321 Outer membrane efflux protein 287 465 2.3E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_3078 a014842ba3f3c4f50e9d3546428ecdf0 472 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 467 2.7E-104 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_0625 7a52bc91307778ad426979c168e4b52f 298 TIGRFAM TIGR00688 rarD: protein RarD 8 260 4.9E-74 T 12-10-2018 IPR004626 RarD protein GO:0005887 PA257_0625 7a52bc91307778ad426979c168e4b52f 298 SUPERFAMILY SSF103481 47 145 3.53E-14 T 12-10-2018 PA257_0625 7a52bc91307778ad426979c168e4b52f 298 SUPERFAMILY SSF103481 191 286 3.92E-8 T 12-10-2018 PA257_0625 7a52bc91307778ad426979c168e4b52f 298 Pfam PF00892 EamA-like transporter family 8 141 3.3E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_1581 782cde6225cd74da5dc7694dfca343ae 1185 Gene3D G3DSA:3.20.20.140 10 280 2.2E-93 T 12-10-2018 PA257_1581 782cde6225cd74da5dc7694dfca343ae 1185 Pfam PF02811 PHP domain 19 183 2.3E-41 T 12-10-2018 IPR004013 PHP domain GO:0003824 PA257_1581 782cde6225cd74da5dc7694dfca343ae 1185 Gene3D G3DSA:2.40.50.140 1006 1099 5.8E-6 T 12-10-2018 PA257_1581 782cde6225cd74da5dc7694dfca343ae 1185 Pfam PF14579 Helix-hairpin-helix motif 822 907 8.6E-26 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_1581 782cde6225cd74da5dc7694dfca343ae 1185 SUPERFAMILY SSF89550 17 274 1.26E-14 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PA257_1581 782cde6225cd74da5dc7694dfca343ae 1185 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 302 748 3.0E-176 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_1581 782cde6225cd74da5dc7694dfca343ae 1185 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 17 1057 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_1581 782cde6225cd74da5dc7694dfca343ae 1185 Pfam PF01336 OB-fold nucleic acid binding domain 1021 1095 6.4E-10 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PA257_1581 782cde6225cd74da5dc7694dfca343ae 1185 SMART SM00481 18 85 2.8E-25 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal PA257_1581 782cde6225cd74da5dc7694dfca343ae 1185 Gene3D G3DSA:1.10.10.1600 446 523 2.1E-27 T 12-10-2018 PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Pfam PF13156 Restriction endonuclease 35 157 6.6E-49 T 12-10-2018 IPR039442 Mrr-like domain PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Pfam PF00271 Helicase conserved C-terminal domain 520 594 1.4E-5 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Gene3D G3DSA:3.40.50.300 155 383 3.0E-26 T 12-10-2018 PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SMART SM00487 163 396 4.8E-19 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF53335 795 1181 3.5E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF52540 119 364 1.63E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Pfam PF02384 N-6 DNA Methylase 860 1042 1.8E-5 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF52980 21 151 9.12E-13 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Gene3D G3DSA:3.40.50.150 861 1232 1.3E-38 T 12-10-2018 PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SMART SM00490 511 595 2.5E-5 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Gene3D G3DSA:3.40.50.300 399 624 4.1E-26 T 12-10-2018 PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF52540 317 600 5.57E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Pfam PF04851 Type III restriction enzyme, res subunit 165 365 6.5E-34 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 917 931 1.5E-6 T 12-10-2018 PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1019 1031 1.5E-6 T 12-10-2018 PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 882 898 1.5E-6 T 12-10-2018 PA257_0005 7d76d045e7ff74de1cfe7f22c30a18e8 1626 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 1022 1028 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_0262 0cc178dacaffcd60f31b1f9d2017fa48 448 Pfam PF07690 Major Facilitator Superfamily 35 405 8.6E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0262 0cc178dacaffcd60f31b1f9d2017fa48 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_0262 0cc178dacaffcd60f31b1f9d2017fa48 448 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 13 412 9.7E-152 T 12-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 PA257_0262 0cc178dacaffcd60f31b1f9d2017fa48 448 Gene3D G3DSA:1.20.1250.20 19 234 1.3E-43 T 12-10-2018 PA257_0262 0cc178dacaffcd60f31b1f9d2017fa48 448 Gene3D G3DSA:1.20.1250.20 260 441 2.6E-20 T 12-10-2018 PA257_0262 0cc178dacaffcd60f31b1f9d2017fa48 448 SUPERFAMILY SSF103473 14 438 5.62E-79 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0262 0cc178dacaffcd60f31b1f9d2017fa48 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_1130 59ffd87729a19297fc600d54b4b89233 506 Pfam PF00171 Aldehyde dehydrogenase family 34 493 2.8E-164 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_1130 59ffd87729a19297fc600d54b4b89233 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_1130 59ffd87729a19297fc600d54b4b89233 506 Gene3D G3DSA:3.40.309.10 266 464 3.7E-164 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_1130 59ffd87729a19297fc600d54b4b89233 506 SUPERFAMILY SSF53720 13 497 3.93E-162 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_1130 59ffd87729a19297fc600d54b4b89233 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_1130 59ffd87729a19297fc600d54b4b89233 506 Gene3D G3DSA:3.40.605.10 23 492 3.7E-164 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_6731 5369557a15a38f4898a374d132a2eeba 691 SMART SM00490 503 587 1.1E-21 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_6731 5369557a15a38f4898a374d132a2eeba 691 Pfam PF00271 Helicase conserved C-terminal domain 479 586 9.2E-16 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_6731 5369557a15a38f4898a374d132a2eeba 691 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 663 7.0E-223 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 PA257_6731 5369557a15a38f4898a374d132a2eeba 691 Gene3D G3DSA:3.40.50.300 456 628 1.7E-52 T 12-10-2018 PA257_6731 5369557a15a38f4898a374d132a2eeba 691 SUPERFAMILY SSF50249 7 172 2.06E-35 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_6731 5369557a15a38f4898a374d132a2eeba 691 Pfam PF00270 DEAD/DEAH box helicase 293 430 9.0E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_6731 5369557a15a38f4898a374d132a2eeba 691 Pfam PF17191 RecG wedge domain 11 170 1.1E-14 T 12-10-2018 IPR033454 RecG, wedge domain PA257_6731 5369557a15a38f4898a374d132a2eeba 691 SUPERFAMILY SSF52540 317 598 3.02E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6731 5369557a15a38f4898a374d132a2eeba 691 Gene3D G3DSA:3.40.50.300 208 448 1.0E-78 T 12-10-2018 PA257_6731 5369557a15a38f4898a374d132a2eeba 691 SMART SM00487 265 458 5.7E-26 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_6731 5369557a15a38f4898a374d132a2eeba 691 Gene3D G3DSA:2.40.50.140 45 139 1.1E-8 T 12-10-2018 PA257_2345 377af067fd6ec2389aef60bea5d1a0f0 328 SUPERFAMILY SSF52540 5 203 4.0E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2345 377af067fd6ec2389aef60bea5d1a0f0 328 Gene3D G3DSA:3.40.50.300 2 162 1.3E-51 T 12-10-2018 PA257_2345 377af067fd6ec2389aef60bea5d1a0f0 328 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 210 321 5.6E-8 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_2345 377af067fd6ec2389aef60bea5d1a0f0 328 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 18 199 1.6E-65 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_2345 377af067fd6ec2389aef60bea5d1a0f0 328 Pfam PF13177 DNA polymerase III, delta subunit 20 159 2.1E-45 T 12-10-2018 PA257_1758 8108f5a9a8743fd0dfffc94bdbfbc065 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PA257_1758 8108f5a9a8743fd0dfffc94bdbfbc065 405 SUPERFAMILY SSF69864 175 400 1.96E-93 T 12-10-2018 PA257_1758 8108f5a9a8743fd0dfffc94bdbfbc065 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 402 52.756 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PA257_1758 8108f5a9a8743fd0dfffc94bdbfbc065 405 Gene3D G3DSA:3.90.1260.10 178 403 2.0E-98 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PA257_1758 8108f5a9a8743fd0dfffc94bdbfbc065 405 SUPERFAMILY SSF52402 5 209 3.31E-51 T 12-10-2018 PA257_1758 8108f5a9a8743fd0dfffc94bdbfbc065 405 Gene3D G3DSA:3.40.50.620 5 177 4.3E-69 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1758 8108f5a9a8743fd0dfffc94bdbfbc065 405 Pfam PF00764 Arginosuccinate synthase 8 397 8.3E-155 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PA257_1758 8108f5a9a8743fd0dfffc94bdbfbc065 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PA257_1758 8108f5a9a8743fd0dfffc94bdbfbc065 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 399 1.8E-142 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PA257_2910 a5963ebe20bafaa21ad68b4e10cd9f1c 182 Pfam PF12838 4Fe-4S dicluster domain 61 115 1.3E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_2910 a5963ebe20bafaa21ad68b4e10cd9f1c 182 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_2910 a5963ebe20bafaa21ad68b4e10cd9f1c 182 Gene3D G3DSA:3.30.70.3270 35 177 1.1E-42 T 12-10-2018 PA257_2910 a5963ebe20bafaa21ad68b4e10cd9f1c 182 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 9 152 27.6 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2910 a5963ebe20bafaa21ad68b4e10cd9f1c 182 SUPERFAMILY SSF54862 35 162 4.18E-29 T 12-10-2018 PA257_2910 a5963ebe20bafaa21ad68b4e10cd9f1c 182 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 18 139 7.6E-53 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_0473 2e4c6b33f223d5953b7d555bbac29f32 387 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 8 349 1.9E-135 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 PA257_0473 2e4c6b33f223d5953b7d555bbac29f32 387 Gene3D G3DSA:3.30.450.90 2 104 4.9E-31 T 12-10-2018 PA257_0473 2e4c6b33f223d5953b7d555bbac29f32 387 SUPERFAMILY SSF52540 9 342 2.37E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0473 2e4c6b33f223d5953b7d555bbac29f32 387 Pfam PF00437 Type II/IV secretion system protein 117 274 1.8E-35 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_0473 2e4c6b33f223d5953b7d555bbac29f32 387 Gene3D G3DSA:3.40.50.300 106 360 3.2E-87 T 12-10-2018 PA257_6714 793b80bb60749b698bda58441f6124f9 154 Gene3D G3DSA:3.10.129.10 2 141 8.5E-41 T 12-10-2018 PA257_6714 793b80bb60749b698bda58441f6124f9 154 PIRSF PIRSF003230 2 145 3.3E-28 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PA257_6714 793b80bb60749b698bda58441f6124f9 154 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 16 124 2.3E-26 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PA257_6714 793b80bb60749b698bda58441f6124f9 154 SUPERFAMILY SSF54637 7 142 9.08E-45 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6714 793b80bb60749b698bda58441f6124f9 154 Pfam PF03061 Thioesterase superfamily 26 110 2.6E-19 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_6676 1d52b8cac93dd02d2d10a900475cd6b9 349 Gene3D G3DSA:3.40.50.1000 25 348 3.2E-171 T 12-10-2018 IPR023214 HAD superfamily PA257_6676 1d52b8cac93dd02d2d10a900475cd6b9 349 Gene3D G3DSA:1.20.1440.310 61 163 3.2E-171 T 12-10-2018 PA257_6676 1d52b8cac93dd02d2d10a900475cd6b9 349 SUPERFAMILY SSF56784 27 221 8.91E-12 T 12-10-2018 IPR036412 HAD-like superfamily PA257_1812 43eb5ff7282b31e2f5972b53197866c1 157 Pfam PF01047 MarR family 40 97 1.8E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1812 43eb5ff7282b31e2f5972b53197866c1 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 2.6E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1812 43eb5ff7282b31e2f5972b53197866c1 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 2.6E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1812 43eb5ff7282b31e2f5972b53197866c1 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 2.6E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1812 43eb5ff7282b31e2f5972b53197866c1 157 SMART SM00347 32 133 8.1E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_1812 43eb5ff7282b31e2f5972b53197866c1 157 SUPERFAMILY SSF46785 6 146 2.42E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1812 43eb5ff7282b31e2f5972b53197866c1 157 Gene3D G3DSA:1.10.10.10 7 148 4.1E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1457 8a34dfb7a88740af1b95536b116898ff 570 Gene3D G3DSA:3.30.1360.60 490 570 1.4E-10 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 PA257_1457 8a34dfb7a88740af1b95536b116898ff 570 Gene3D G3DSA:3.30.1360.60 381 461 3.2E-22 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 PA257_1457 8a34dfb7a88740af1b95536b116898ff 570 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 360 444 8.1E-15 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PA257_1457 8a34dfb7a88740af1b95536b116898ff 570 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 398 415 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PA257_1457 8a34dfb7a88740af1b95536b116898ff 570 SUPERFAMILY SSF55604 494 567 1.31E-8 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 PA257_1457 8a34dfb7a88740af1b95536b116898ff 570 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 7 457 2.4E-176 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 PA257_1457 8a34dfb7a88740af1b95536b116898ff 570 Pfam PF02378 Phosphotransferase system, EIIC 14 303 2.8E-72 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PA257_1457 8a34dfb7a88740af1b95536b116898ff 570 Pfam PF00367 phosphotransferase system, EIIB 496 527 1.2E-4 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PA257_1457 8a34dfb7a88740af1b95536b116898ff 570 Pfam PF00367 phosphotransferase system, EIIB 390 418 9.0E-9 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PA257_1457 8a34dfb7a88740af1b95536b116898ff 570 SUPERFAMILY SSF55604 385 459 3.4E-16 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 PA257_4696 954357b1c410bbc194cec9ae7720a9d0 774 Pfam PF00884 Sulfatase 224 501 1.5E-36 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PA257_4696 954357b1c410bbc194cec9ae7720a9d0 774 Gene3D G3DSA:3.40.720.10 220 503 1.2E-40 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_4696 954357b1c410bbc194cec9ae7720a9d0 774 SUPERFAMILY SSF53649 222 551 2.84E-48 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_1426 c60e1b05d0d1a191dc0807d93fd31d1f 316 Pfam PF01032 FecCD transport family 28 311 8.5E-38 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PA257_1426 c60e1b05d0d1a191dc0807d93fd31d1f 316 Gene3D G3DSA:1.10.3470.10 7 315 8.0E-41 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_1426 c60e1b05d0d1a191dc0807d93fd31d1f 316 SUPERFAMILY SSF81345 9 311 8.5E-42 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_2656 139066086d0bfd08929ec679d829cec1 241 SUPERFAMILY SSF51206 17 149 3.14E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like PA257_2656 139066086d0bfd08929ec679d829cec1 241 Pfam PF13545 Crp-like helix-turn-helix domain 160 229 3.8E-13 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_2656 139066086d0bfd08929ec679d829cec1 241 Pfam PF00027 Cyclic nucleotide-binding domain 41 126 5.9E-11 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_2656 139066086d0bfd08929ec679d829cec1 241 Gene3D G3DSA:1.10.10.10 157 233 4.7E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2656 139066086d0bfd08929ec679d829cec1 241 Gene3D G3DSA:2.60.120.10 13 156 2.0E-21 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_2656 139066086d0bfd08929ec679d829cec1 241 SMART SM00100 22 140 4.0E-8 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_2656 139066086d0bfd08929ec679d829cec1 241 SUPERFAMILY SSF46785 157 231 3.5E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2098 09dcbd129467b49bf98fffcd715c5bef 296 Hamap MF_01805 Segregation and condensation protein A [scpA]. 47 277 22.374 T 12-10-2018 IPR003768 Segregation and condensation protein A PA257_2098 09dcbd129467b49bf98fffcd715c5bef 296 Pfam PF02616 Segregation and condensation protein ScpA 64 155 7.8E-22 T 12-10-2018 IPR003768 Segregation and condensation protein A PA257_2098 09dcbd129467b49bf98fffcd715c5bef 296 Pfam PF02616 Segregation and condensation protein ScpA 206 274 7.6E-8 T 12-10-2018 IPR003768 Segregation and condensation protein A PA257_4281 48a6ff61511e85474aef9ed66ad57c01 569 SUPERFAMILY SSF53474 211 410 9.26E-5 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4281 48a6ff61511e85474aef9ed66ad57c01 569 SUPERFAMILY SSF53474 50 292 1.86E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0909 62d8850f288e78a4ec0a691bbf9ee82a 140 Gene3D G3DSA:3.10.180.10 19 137 3.5E-39 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_0909 62d8850f288e78a4ec0a691bbf9ee82a 140 SUPERFAMILY SSF54593 23 137 2.42E-14 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_6693 e3ea7cd34c873702d17e8ce3b86ee1f2 517 Pfam PF13091 PLD-like domain 68 219 1.4E-20 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PA257_6693 e3ea7cd34c873702d17e8ce3b86ee1f2 517 Pfam PF13091 PLD-like domain 316 454 4.9E-20 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PA257_6693 e3ea7cd34c873702d17e8ce3b86ee1f2 517 Gene3D G3DSA:3.30.870.10 285 469 1.2E-33 T 12-10-2018 PA257_6693 e3ea7cd34c873702d17e8ce3b86ee1f2 517 SUPERFAMILY SSF56024 272 496 2.94E-32 T 12-10-2018 PA257_6693 e3ea7cd34c873702d17e8ce3b86ee1f2 517 Gene3D G3DSA:3.30.870.10 42 235 2.2E-40 T 12-10-2018 PA257_6693 e3ea7cd34c873702d17e8ce3b86ee1f2 517 SMART SM00155 160 187 1.0E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_6693 e3ea7cd34c873702d17e8ce3b86ee1f2 517 SMART SM00155 405 432 3.8E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PA257_6693 e3ea7cd34c873702d17e8ce3b86ee1f2 517 SUPERFAMILY SSF56024 45 239 2.47E-42 T 12-10-2018 PA257_1928 7a28c329edb76ede37550490455628e2 101 Gene3D G3DSA:3.30.750.24 8 101 9.4E-20 T 12-10-2018 IPR036513 STAS domain superfamily PA257_1928 7a28c329edb76ede37550490455628e2 101 Pfam PF13466 STAS domain 16 94 2.3E-14 T 12-10-2018 IPR002645 STAS domain PA257_1928 7a28c329edb76ede37550490455628e2 101 SUPERFAMILY SSF52091 10 100 1.08E-21 T 12-10-2018 IPR036513 STAS domain superfamily PA257_0656 1ad986ce421620bc4233d9cf0ee99a55 150 Gene3D G3DSA:1.10.10.10 1 52 3.5E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0656 1ad986ce421620bc4233d9cf0ee99a55 150 Pfam PF13404 AsnC-type helix-turn-helix domain 1 45 2.6E-8 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_0656 1ad986ce421620bc4233d9cf0ee99a55 150 Gene3D G3DSA:3.30.70.3460 64 141 5.9E-20 T 12-10-2018 PA257_0656 1ad986ce421620bc4233d9cf0ee99a55 150 SMART SM00344 1 108 0.0059 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 PIRSF PIRSF002869 1 512 2.7E-175 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 357 376 1.0E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 409 426 1.0E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 157 178 1.0E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 52 68 1.0E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 133 157 1.0E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 259 285 1.0E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 33 52 1.0E-86 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 2.0E-164 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 Pfam PF03023 MviN-like protein 28 476 9.9E-155 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5738 92863eb17fe7ad27a59701830b7c3b47 512 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.51 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5284 eb5cac0c6b96e8a95aa2ba9ec9bb132a 73 SUPERFAMILY SSF46955 23 70 4.76E-5 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_1726 f71c3d4b214cf8674307e400435afe4e 549 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 547 41.513 T 12-10-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 PA257_1726 f71c3d4b214cf8674307e400435afe4e 549 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 11 236 2.9E-30 T 12-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 PA257_5177 e1dd1734c016a4cf9df2dc4cf6cf6a11 271 Pfam PF16106 Domain of unknown function (DUF4824) 19 265 4.4E-90 T 12-10-2018 IPR032249 Protein of unknown function DUF4824 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 SUPERFAMILY SSF58104 236 545 3.27E-77 T 12-10-2018 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 Pfam PF00672 HAMP domain 216 264 4.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 408 1.1E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 1.1E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 1.1E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 1.1E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 511 2.2E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 SMART SM00304 214 268 4.8E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 SMART SM00304 433 492 110.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 Gene3D G3DSA:1.10.287.950 215 545 5.3E-75 T 12-10-2018 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 SMART SM00283 269 544 2.7E-66 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2390 cc56474e41fa894634cc21ecca21c438 545 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 184 2.2E-12 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain PA257_4344 e9eed82a3d7ba86e31884a27c9b320b9 378 SUPERFAMILY SSF160544 245 352 8.89E-41 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal PA257_4344 e9eed82a3d7ba86e31884a27c9b320b9 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 2.9E-35 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4344 e9eed82a3d7ba86e31884a27c9b320b9 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 2.9E-35 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4344 e9eed82a3d7ba86e31884a27c9b320b9 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 2.9E-35 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4344 e9eed82a3d7ba86e31884a27c9b320b9 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 2.9E-35 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4344 e9eed82a3d7ba86e31884a27c9b320b9 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.9E-35 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4344 e9eed82a3d7ba86e31884a27c9b320b9 378 Gene3D G3DSA:3.40.1690.10 219 359 1.0E-55 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal PA257_4344 e9eed82a3d7ba86e31884a27c9b320b9 378 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 354 7.8E-125 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 PA257_4344 e9eed82a3d7ba86e31884a27c9b320b9 378 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 3.9E-126 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_3505 8b050177b173c2e2fa8cb824899bf169 390 Gene3D G3DSA:1.20.140.10 238 385 5.4E-47 T 12-10-2018 PA257_3505 8b050177b173c2e2fa8cb824899bf169 390 Gene3D G3DSA:2.40.110.10 127 237 1.4E-30 T 12-10-2018 PA257_3505 8b050177b173c2e2fa8cb824899bf169 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 3.3E-44 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_3505 8b050177b173c2e2fa8cb824899bf169 390 SUPERFAMILY SSF47203 232 385 9.18E-53 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_3505 8b050177b173c2e2fa8cb824899bf169 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 123 4.6E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_3505 8b050177b173c2e2fa8cb824899bf169 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 221 1.1E-16 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_3505 8b050177b173c2e2fa8cb824899bf169 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_3505 8b050177b173c2e2fa8cb824899bf169 390 SUPERFAMILY SSF56645 1 245 7.33E-58 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_3505 8b050177b173c2e2fa8cb824899bf169 390 Gene3D G3DSA:1.10.540.10 1 126 5.8E-30 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_0936 0400fd58270b64edb7847bc2e40fd8dc 272 Gene3D G3DSA:1.10.10.10 17 91 1.9E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0936 0400fd58270b64edb7847bc2e40fd8dc 272 SUPERFAMILY SSF46785 23 97 3.91E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0936 0400fd58270b64edb7847bc2e40fd8dc 272 Pfam PF09339 IclR helix-turn-helix domain 25 76 6.5E-15 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_0936 0400fd58270b64edb7847bc2e40fd8dc 272 SUPERFAMILY SSF55781 81 238 6.08E-21 T 12-10-2018 PA257_0936 0400fd58270b64edb7847bc2e40fd8dc 272 Gene3D G3DSA:3.30.450.40 99 257 1.4E-17 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_0936 0400fd58270b64edb7847bc2e40fd8dc 272 Pfam PF01614 Bacterial transcriptional regulator 145 245 2.5E-7 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal PA257_0936 0400fd58270b64edb7847bc2e40fd8dc 272 SMART SM00346 23 113 2.6E-17 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_1929 c18d215688bbeca2a7c98b03b35032b2 571 SMART SM00448 11 124 4.2E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1929 c18d215688bbeca2a7c98b03b35032b2 571 Gene3D G3DSA:3.30.565.10 412 569 4.6E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1929 c18d215688bbeca2a7c98b03b35032b2 571 Pfam PF13581 Histidine kinase-like ATPase domain 494 563 2.2E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_1929 c18d215688bbeca2a7c98b03b35032b2 571 Gene3D G3DSA:3.60.40.10 171 391 3.4E-34 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_1929 c18d215688bbeca2a7c98b03b35032b2 571 SMART SM00331 186 386 4.9E-6 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_1929 c18d215688bbeca2a7c98b03b35032b2 571 SUPERFAMILY SSF55874 443 551 8.18E-7 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1929 c18d215688bbeca2a7c98b03b35032b2 571 Gene3D G3DSA:3.40.50.2300 5 142 5.3E-37 T 12-10-2018 PA257_1929 c18d215688bbeca2a7c98b03b35032b2 571 SUPERFAMILY SSF52172 10 150 1.71E-38 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1929 c18d215688bbeca2a7c98b03b35032b2 571 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 198 386 4.1E-39 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_1929 c18d215688bbeca2a7c98b03b35032b2 571 Pfam PF00072 Response regulator receiver domain 13 124 1.7E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4381 f9fb2a337d3b15941196d4d57be65694 290 SUPERFAMILY SSF46785 2 109 1.82E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4381 f9fb2a337d3b15941196d4d57be65694 290 Pfam PF03466 LysR substrate binding domain 85 283 4.6E-44 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4381 f9fb2a337d3b15941196d4d57be65694 290 Gene3D G3DSA:3.40.190.290 89 283 2.0E-35 T 12-10-2018 PA257_4381 f9fb2a337d3b15941196d4d57be65694 290 SUPERFAMILY SSF53850 86 285 1.29E-40 T 12-10-2018 PA257_4381 f9fb2a337d3b15941196d4d57be65694 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4381 f9fb2a337d3b15941196d4d57be65694 290 Gene3D G3DSA:1.10.10.10 1 87 4.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 301 8.0E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 Gene3D G3DSA:3.50.50.60 10 312 5.9E-125 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 313 8.5E-120 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 Gene3D G3DSA:3.50.50.60 119 244 5.9E-125 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.7E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.7E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 1.7E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 1.7E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 200 216 1.7E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.7E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 1.7E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 1.7E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 1.7E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 SUPERFAMILY SSF51905 2 313 4.29E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 5.5E-42 T 12-10-2018 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.5E-42 T 12-10-2018 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.5E-42 T 12-10-2018 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 5.5E-42 T 12-10-2018 PA257_5000 cac5928ec0308a4affa6469cdc0bb2d7 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 5.5E-42 T 12-10-2018 PA257_0133 9abf69c9e7a4cc73c181aa8fea2e8f47 243 Pfam PF02104 SURF1 family 19 216 6.3E-32 T 12-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_5503 9e9361042c1c4cf37593f3dad9eb9510 332 SUPERFAMILY SSF52317 10 207 1.03E-36 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_5503 9e9361042c1c4cf37593f3dad9eb9510 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 278 320 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_5503 9e9361042c1c4cf37593f3dad9eb9510 332 SUPERFAMILY SSF46689 277 328 2.37E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5503 9e9361042c1c4cf37593f3dad9eb9510 332 SUPERFAMILY SSF46689 224 275 8.78E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5503 9e9361042c1c4cf37593f3dad9eb9510 332 Pfam PF12833 Helix-turn-helix domain 248 326 1.5E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5503 9e9361042c1c4cf37593f3dad9eb9510 332 Gene3D G3DSA:3.40.50.880 8 210 5.2E-45 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_5503 9e9361042c1c4cf37593f3dad9eb9510 332 SMART SM00342 241 324 2.5E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5503 9e9361042c1c4cf37593f3dad9eb9510 332 Gene3D G3DSA:1.10.10.60 222 328 2.5E-27 T 12-10-2018 PA257_4905 67e18803d36cae31d011484a1587323b 276 SUPERFAMILY SSF101386 2 104 1.96E-23 T 12-10-2018 PA257_4905 67e18803d36cae31d011484a1587323b 276 TIGRFAM TIGR00444 mazG: MazG family protein 10 267 2.1E-97 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG PA257_4905 67e18803d36cae31d011484a1587323b 276 Gene3D G3DSA:1.10.287.1080 141 272 1.1E-47 T 12-10-2018 PA257_4905 67e18803d36cae31d011484a1587323b 276 Gene3D G3DSA:1.10.287.1080 1 133 7.2E-43 T 12-10-2018 PA257_4905 67e18803d36cae31d011484a1587323b 276 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 180 236 4.7E-10 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PA257_4905 67e18803d36cae31d011484a1587323b 276 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 4.2E-26 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PA257_4905 67e18803d36cae31d011484a1587323b 276 SUPERFAMILY SSF101386 147 245 1.6E-26 T 12-10-2018 PA257_3519 1c5d9440e0b9abfc02ec2fc5d256cbd9 463 Pfam PF07690 Major Facilitator Superfamily 57 419 1.2E-48 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3519 1c5d9440e0b9abfc02ec2fc5d256cbd9 463 Gene3D G3DSA:1.20.1250.20 43 238 2.7E-46 T 12-10-2018 PA257_3519 1c5d9440e0b9abfc02ec2fc5d256cbd9 463 SUPERFAMILY SSF103473 35 454 1.23E-71 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3519 1c5d9440e0b9abfc02ec2fc5d256cbd9 463 Gene3D G3DSA:1.20.1250.20 266 461 4.7E-25 T 12-10-2018 PA257_1312 08b92b5e48adcb7ae4ab51cc77799b4a 229 Gene3D G3DSA:2.160.10.10 36 197 3.0E-45 T 12-10-2018 PA257_1312 08b92b5e48adcb7ae4ab51cc77799b4a 229 SUPERFAMILY SSF51161 35 192 2.91E-37 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_1312 08b92b5e48adcb7ae4ab51cc77799b4a 229 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 150 5.6E-8 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_1312 08b92b5e48adcb7ae4ab51cc77799b4a 229 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PA257_0731 52774d007bf861e9c727dd59e555c360 180 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 130 6.7E-23 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PA257_0731 52774d007bf861e9c727dd59e555c360 180 SUPERFAMILY SSF55083 5 152 5.36E-38 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PA257_0731 52774d007bf861e9c727dd59e555c360 180 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 130 3.8E-22 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PA257_0731 52774d007bf861e9c727dd59e555c360 180 Gene3D G3DSA:3.30.70.560 2 154 9.8E-31 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PA257_6338 1a2c2ca18f35c8d10923cb86a3ec12d1 479 Gene3D G3DSA:3.30.2010.10 54 140 3.8E-7 T 12-10-2018 PA257_6338 1a2c2ca18f35c8d10923cb86a3ec12d1 479 Pfam PF01435 Peptidase family M48 60 249 3.0E-42 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PA257_5772 7aa0dbba85fde10263cbba04a8a0f324 397 Pfam PF12704 MacB-like periplasmic core domain 25 239 2.6E-21 T 12-10-2018 IPR025857 MacB-like periplasmic core domain PA257_5772 7aa0dbba85fde10263cbba04a8a0f324 397 Pfam PF02687 FtsX-like permease family 302 390 2.6E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PA257_4900 94b9197786cebf118b44e0c7724f6dfd 108 Gene3D G3DSA:2.30.30.400 7 93 3.8E-19 T 12-10-2018 IPR038626 Rof-like superfamily PA257_4900 94b9197786cebf118b44e0c7724f6dfd 108 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 6 90 4.3E-27 T 12-10-2018 IPR009778 Modulator of Rho-dependent transcription termination PA257_4900 94b9197786cebf118b44e0c7724f6dfd 108 SUPERFAMILY SSF101744 1 90 3.71E-20 T 12-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 Gene3D G3DSA:3.30.565.10 1 229 1.1E-77 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 Gene3D G3DSA:3.30.230.80 235 407 1.9E-69 T 12-10-2018 PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 Pfam PF00183 Hsp90 protein 227 629 3.1E-132 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 PIRSF PIRSF002583 1 634 3.9E-218 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 SMART SM00387 30 187 1.8E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 630 32.88 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 Gene3D G3DSA:1.20.120.790 500 631 1.1E-42 T 12-10-2018 IPR037196 HSP90, C-terminal domain PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 Gene3D G3DSA:3.40.50.11260 408 499 7.5E-34 T 12-10-2018 PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 8 28 3.2E-61 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 175 192 3.2E-61 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 193 211 3.2E-61 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 123 145 3.2E-61 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 96 113 3.2E-61 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 29 51 3.2E-61 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 78 95 3.2E-61 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 3.2E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 SUPERFAMILY SSF54211 236 491 2.12E-98 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 SUPERFAMILY SSF110942 518 630 4.05E-35 T 12-10-2018 IPR037196 HSP90, C-terminal domain PA257_4186 779af721d76805f4f2e37c253abbbfbf 634 SUPERFAMILY SSF55874 8 216 1.44E-65 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5396 5b4b4b586bc2bd2f4689735b444550bf 375 SUPERFAMILY SSF55073 216 366 4.08E-46 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_5396 5b4b4b586bc2bd2f4689735b444550bf 375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 207 367 1.4E-41 T 12-10-2018 IPR000160 GGDEF domain PA257_5396 5b4b4b586bc2bd2f4689735b444550bf 375 Gene3D G3DSA:3.30.70.270 211 375 7.4E-58 T 12-10-2018 PA257_5396 5b4b4b586bc2bd2f4689735b444550bf 375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 212 365 7.1E-43 T 12-10-2018 IPR000160 GGDEF domain PA257_5396 5b4b4b586bc2bd2f4689735b444550bf 375 SMART SM00267 200 369 1.6E-58 T 12-10-2018 IPR000160 GGDEF domain PA257_6362 d6b625479a4cfadf9713c04df8ab5205 267 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 234 5.6E-76 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PA257_6362 d6b625479a4cfadf9713c04df8ab5205 267 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 247 16.398 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PA257_6362 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 111 137 9.5E-50 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PA257_6362 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 16 43 9.5E-50 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PA257_6362 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 93 111 9.5E-50 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PA257_6362 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 162 190 9.5E-50 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PA257_6362 d6b625479a4cfadf9713c04df8ab5205 267 ProSitePatterns PS01218 TatC family signature. 162 181 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site PA257_6362 d6b625479a4cfadf9713c04df8ab5205 267 Pfam PF00902 Sec-independent protein translocase protein (TatC) 20 229 2.0E-65 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PA257_4076 2b04936df0ed22b9aada18c603d24638 288 SUPERFAMILY SSF140591 68 263 9.42E-55 T 12-10-2018 PA257_4076 2b04936df0ed22b9aada18c603d24638 288 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 30 276 8.1E-75 T 12-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 PA257_4076 2b04936df0ed22b9aada18c603d24638 288 Pfam PF07201 HrpJ-like domain 54 217 2.9E-38 T 12-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 1.2E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 1.2E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 230 253 1.2E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 65 77 1.2E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 1.2E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 211 225 1.2E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 72 268 1.6E-67 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 Gene3D G3DSA:3.40.50.150 71 273 3.1E-59 T 12-10-2018 PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 6 56 2.5E-13 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 SMART SM00138 5 271 4.5E-95 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 SUPERFAMILY SSF47757 5 71 4.71E-15 T 12-10-2018 PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 Gene3D G3DSA:1.10.155.10 1 70 2.9E-10 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 SUPERFAMILY SSF53335 72 265 3.92E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1927 0b10ba61fddaca5c0f11b388045f8bc8 274 PIRSF PIRSF000410 1 274 1.7E-75 T 12-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 19 207 8.4E-105 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 128 141 - T 12-10-2018 IPR033135 ClpP, histidine active site PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 19 209 43.732 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 Gene3D G3DSA:3.90.226.10 12 212 6.4E-84 T 12-10-2018 PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 Pfam PF00574 Clp protease 29 208 1.3E-88 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 106 117 - T 12-10-2018 IPR018215 ClpP, Ser active site PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 35 50 2.0E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 75 95 2.0E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 127 146 2.0E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 2.0E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 106 123 2.0E-52 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_3959 07e51ed7ba21ae35f08f734999ec04a9 213 SUPERFAMILY SSF52096 27 210 6.84E-76 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_4884 05ca4c64606ef3b2ba397f7e84a9b5c9 86 Pfam PF00708 Acylphosphatase 2 80 4.6E-24 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PA257_4884 05ca4c64606ef3b2ba397f7e84a9b5c9 86 SUPERFAMILY SSF54975 2 85 2.83E-25 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PA257_4884 05ca4c64606ef3b2ba397f7e84a9b5c9 86 Gene3D G3DSA:3.30.70.100 1 85 1.7E-28 T 12-10-2018 PA257_4884 05ca4c64606ef3b2ba397f7e84a9b5c9 86 ProSitePatterns PS00151 Acylphosphatase signature 2. 29 45 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PA257_4884 05ca4c64606ef3b2ba397f7e84a9b5c9 86 ProSitePatterns PS00150 Acylphosphatase signature 1. 5 15 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PA257_1154 7fcd2f8580bc51cb80272962c9039e66 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 276 366 1.6E-24 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_1154 7fcd2f8580bc51cb80272962c9039e66 386 Gene3D G3DSA:2.60.410.10 276 366 7.7E-34 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_1154 7fcd2f8580bc51cb80272962c9039e66 386 Gene3D G3DSA:3.40.710.10 24 275 2.4E-99 T 12-10-2018 PA257_1154 7fcd2f8580bc51cb80272962c9039e66 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 255 1.1E-87 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PA257_1154 7fcd2f8580bc51cb80272962c9039e66 386 SUPERFAMILY SSF69189 276 368 8.04E-25 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_1154 7fcd2f8580bc51cb80272962c9039e66 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 4.3E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PA257_1154 7fcd2f8580bc51cb80272962c9039e66 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 4.3E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PA257_1154 7fcd2f8580bc51cb80272962c9039e66 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 4.3E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PA257_1154 7fcd2f8580bc51cb80272962c9039e66 386 SUPERFAMILY SSF56601 8 276 3.04E-90 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_1154 7fcd2f8580bc51cb80272962c9039e66 386 SMART SM00936 276 366 1.5E-32 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_6692 6ca0021a8df91f4b3bc7f9e2ef12c380 439 Gene3D G3DSA:3.30.9.10 131 353 4.1E-74 T 12-10-2018 PA257_6692 6ca0021a8df91f4b3bc7f9e2ef12c380 439 Pfam PF01266 FAD dependent oxidoreductase 39 392 3.7E-57 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_6692 6ca0021a8df91f4b3bc7f9e2ef12c380 439 SUPERFAMILY SSF51905 38 431 2.17E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6692 6ca0021a8df91f4b3bc7f9e2ef12c380 439 Gene3D G3DSA:3.50.50.60 39 394 4.1E-74 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6889 4508728c41628793d7665f015cde9ad9 274 Gene3D G3DSA:3.60.10.10 16 259 4.8E-36 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_6889 4508728c41628793d7665f015cde9ad9 274 SUPERFAMILY SSF56219 10 259 1.23E-33 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_6889 4508728c41628793d7665f015cde9ad9 274 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 20 246 1.3E-11 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PA257_6634 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 SUPERFAMILY SSF54506 3 276 6.29E-52 T 12-10-2018 PA257_6634 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 1.6E-90 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PA257_6634 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PA257_6634 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 Gene3D G3DSA:3.10.310.10 5 272 1.7E-102 T 12-10-2018 PA257_6634 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 Gene3D G3DSA:3.10.310.10 117 263 1.7E-102 T 12-10-2018 PA257_6634 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 Pfam PF01678 Diaminopimelate epimerase 154 269 5.3E-27 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PA257_6634 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 Pfam PF01678 Diaminopimelate epimerase 5 125 3.8E-33 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PA257_6634 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 40.32 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PA257_0932 450a531febf59e932056b2a72bf7e53f 343 Gene3D G3DSA:1.10.3470.10 17 343 7.6E-82 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_0932 450a531febf59e932056b2a72bf7e53f 343 Pfam PF01032 FecCD transport family 33 339 6.6E-77 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PA257_0932 450a531febf59e932056b2a72bf7e53f 343 SUPERFAMILY SSF81345 12 339 3.79E-67 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_0682 379dffbb1b06be6587aa6e0792ae4c45 276 SUPERFAMILY SSF103481 38 133 8.11E-13 T 12-10-2018 PA257_0682 379dffbb1b06be6587aa6e0792ae4c45 276 SUPERFAMILY SSF103481 180 275 2.75E-12 T 12-10-2018 PA257_0682 379dffbb1b06be6587aa6e0792ae4c45 276 Pfam PF00892 EamA-like transporter family 144 274 6.1E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_0833 f04d50fc81601fa1adb5c543ea51b6a5 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 197 1.1E-63 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 PA257_0833 f04d50fc81601fa1adb5c543ea51b6a5 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 34.093 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0833 f04d50fc81601fa1adb5c543ea51b6a5 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 197 8.3E-74 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0833 f04d50fc81601fa1adb5c543ea51b6a5 200 SUPERFAMILY SSF52166 6 199 1.44E-71 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 PA257_0833 f04d50fc81601fa1adb5c543ea51b6a5 200 Gene3D G3DSA:3.40.1370.10 4 199 1.6E-67 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 PA257_1732 d8271356d198452abffaeb37b2936a6c 216 Pfam PF11182 Alginate O-acetyl transferase AlgF 16 194 1.5E-85 T 12-10-2018 IPR035422 Alginate O-acetyl transferase AlgF GO:0042121 PA257_1732 d8271356d198452abffaeb37b2936a6c 216 ProDom PD022759 ALGINATE BIOSYNTHESIS ALGF PRECURSOR SIGNAL PERIPLASMIC TRANSFERASE O-ACETYLTRANSFERASE 13 216 3.0E-113 T 12-10-2018 IPR035422 Alginate O-acetyl transferase AlgF GO:0042121 PA257_1323 0e1ce59974556434a91faf453650c3ff 100 Pfam PF12840 Helix-turn-helix domain 5 78 5.3E-13 T 12-10-2018 PA257_1323 0e1ce59974556434a91faf453650c3ff 100 SUPERFAMILY SSF46785 2 96 2.9E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1323 0e1ce59974556434a91faf453650c3ff 100 Gene3D G3DSA:1.10.10.10 1 99 6.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1323 0e1ce59974556434a91faf453650c3ff 100 SMART SM00418 5 98 1.8E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_6529 f42976a0d8f0e49d7d56c3b8903e4320 145 Gene3D G3DSA:3.10.350.10 96 143 4.7E-14 T 12-10-2018 IPR036779 LysM domain superfamily PA257_6529 f42976a0d8f0e49d7d56c3b8903e4320 145 SUPERFAMILY SSF54106 94 144 9.16E-7 T 12-10-2018 PA257_6529 f42976a0d8f0e49d7d56c3b8903e4320 145 Pfam PF01476 LysM domain 96 144 1.1E-11 T 12-10-2018 IPR018392 LysM domain PA257_6529 f42976a0d8f0e49d7d56c3b8903e4320 145 Pfam PF04972 BON domain 22 87 5.5E-13 T 12-10-2018 IPR007055 BON domain PA257_6529 f42976a0d8f0e49d7d56c3b8903e4320 145 SMART SM00257 95 144 5.6E-10 T 12-10-2018 IPR018392 LysM domain PA257_3894 32468be9e7ff0f6b1e7ac565423c571f 273 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 13 250 1.4E-102 T 12-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 PA257_3894 32468be9e7ff0f6b1e7ac565423c571f 273 SUPERFAMILY SSF56112 25 256 1.25E-29 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_3894 32468be9e7ff0f6b1e7ac565423c571f 273 Gene3D G3DSA:3.90.1200.10 89 256 9.5E-6 T 12-10-2018 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 Pfam PF07721 Tetratricopeptide repeat 190 211 0.077 T 12-10-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 Gene3D G3DSA:1.25.40.10 350 569 6.8E-33 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 Gene3D G3DSA:1.25.40.10 43 349 1.3E-29 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 Pfam PF13432 Tetratricopeptide repeat 430 493 1.4E-5 T 12-10-2018 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 Pfam PF13432 Tetratricopeptide repeat 501 559 1.8E-8 T 12-10-2018 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 Pfam PF13432 Tetratricopeptide repeat 304 345 0.0026 T 12-10-2018 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 SUPERFAMILY SSF48452 111 211 7.59E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 SUPERFAMILY SSF48452 223 390 4.05E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 SUPERFAMILY SSF48452 391 559 5.22E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 SMART SM00028 288 321 170.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 SMART SM00028 355 388 160.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 SMART SM00028 390 423 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 SMART SM00028 220 253 96.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 SMART SM00028 424 457 170.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 SMART SM00028 493 526 0.055 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 SMART SM00028 458 492 97.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_5853 26e2e4f8bf318868c506d42f5404eece 575 Pfam PF14559 Tetratricopeptide repeat 233 290 4.6E-11 T 12-10-2018 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 Gene3D G3DSA:3.40.50.140 1 149 7.4E-51 T 12-10-2018 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 652 1.6E-221 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 1.4E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 1.4E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 522 536 1.4E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 1.4E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 1.4E-25 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 Gene3D G3DSA:2.70.20.10 211 489 2.0E-148 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 Gene3D G3DSA:3.30.65.10 611 660 2.8E-5 T 12-10-2018 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 621 654 1.0E-9 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 Gene3D G3DSA:1.10.290.10 280 409 2.0E-148 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 SMART SM00493 1 122 3.5E-24 T 12-10-2018 IPR006171 TOPRIM domain PA257_2633 dc224da6595b43e42a009d8f521c909c 674 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 Pfam PF01751 Toprim domain 3 128 2.1E-16 T 12-10-2018 IPR006171 TOPRIM domain PA257_2633 dc224da6595b43e42a009d8f521c909c 674 SMART SM00437 271 559 1.1E-62 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 Gene3D G3DSA:1.10.460.10 156 603 2.0E-148 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 Pfam PF01131 DNA topoisomerase 152 590 2.4E-111 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 SUPERFAMILY SSF56712 1 606 9.03E-177 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain PA257_2633 dc224da6595b43e42a009d8f521c909c 674 SUPERFAMILY SSF57783 620 655 9.01E-10 T 12-10-2018 PA257_2633 dc224da6595b43e42a009d8f521c909c 674 SMART SM00436 122 217 1.6E-35 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PA257_6351 f30676f3ae9e6785de61b67de0583a6d 205 Gene3D G3DSA:1.10.357.10 1 203 8.7E-54 T 12-10-2018 PA257_6351 f30676f3ae9e6785de61b67de0583a6d 205 Pfam PF13972 Bacterial transcriptional repressor 56 192 8.1E-32 T 12-10-2018 IPR025722 Bacterial transcriptional repressor TetR PA257_6351 f30676f3ae9e6785de61b67de0583a6d 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 6.9E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_6351 f30676f3ae9e6785de61b67de0583a6d 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 6.9E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_6351 f30676f3ae9e6785de61b67de0583a6d 205 SUPERFAMILY SSF46689 2 65 3.23E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6351 f30676f3ae9e6785de61b67de0583a6d 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 2.2E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3885 588c197cda95ff4e01dfdec3ac414430 758 SUPERFAMILY SSF52540 155 538 2.85E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3885 588c197cda95ff4e01dfdec3ac414430 758 SMART SM00491 609 744 2.0E-8 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PA257_3885 588c197cda95ff4e01dfdec3ac414430 758 Gene3D G3DSA:3.40.50.300 562 758 2.8E-48 T 12-10-2018 PA257_3885 588c197cda95ff4e01dfdec3ac414430 758 Pfam PF13307 Helicase C-terminal domain 596 756 4.0E-32 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PA257_3885 588c197cda95ff4e01dfdec3ac414430 758 Pfam PF06733 DEAD_2 278 396 3.1E-11 T 12-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 PA257_3885 588c197cda95ff4e01dfdec3ac414430 758 Gene3D G3DSA:3.40.50.300 191 547 1.8E-34 T 12-10-2018 PA257_3885 588c197cda95ff4e01dfdec3ac414430 758 SUPERFAMILY SSF52540 520 739 5.91E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3885 588c197cda95ff4e01dfdec3ac414430 758 Gene3D G3DSA:1.10.275.30 391 510 1.8E-34 T 12-10-2018 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 Gene3D G3DSA:3.40.50.620 7 383 1.6E-152 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 Gene3D G3DSA:2.20.28.20 141 175 1.6E-152 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 Pfam PF01588 Putative tRNA binding domain 582 675 3.4E-20 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 Gene3D G3DSA:2.40.50.140 567 678 4.8E-29 T 12-10-2018 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 SUPERFAMILY SSF57770 141 175 5.36E-12 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 2.2E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 2.2E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 2.2E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 2.2E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 2.2E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 2.2E-24 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 535 2.8E-174 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 542 678 2.1E-40 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 Gene3D G3DSA:1.10.730.10 388 526 1.0E-31 T 12-10-2018 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 545 39.359 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 SUPERFAMILY SSF50249 571 677 1.64E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 Pfam PF09334 tRNA synthetases class I (M) 7 395 4.4E-154 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 SUPERFAMILY SSF47323 389 547 1.42E-42 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_1786 9cfd665f41f9d85d6a5d30c8a47526fe 678 SUPERFAMILY SSF52374 4 386 1.13E-98 T 12-10-2018 PA257_4041 13dadabc237d556a4f4bc110156c5c3b 243 Pfam PF00227 Proteasome subunit 4 182 5.7E-9 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 PA257_4041 13dadabc237d556a4f4bc110156c5c3b 243 PIRSF PIRSF009120 1 242 3.9E-106 T 12-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 PA257_4041 13dadabc237d556a4f4bc110156c5c3b 243 Gene3D G3DSA:3.60.20.10 2 232 2.7E-28 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_4041 13dadabc237d556a4f4bc110156c5c3b 243 SUPERFAMILY SSF56235 2 237 1.42E-36 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_0450 9433f0a69551f271c5f8d5c3721884fc 223 Gene3D G3DSA:3.40.50.300 1 223 1.1E-64 T 12-10-2018 PA257_0450 9433f0a69551f271c5f8d5c3721884fc 223 SMART SM00382 27 214 6.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0450 9433f0a69551f271c5f8d5c3721884fc 223 Pfam PF00005 ABC transporter 18 165 1.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0450 9433f0a69551f271c5f8d5c3721884fc 223 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.0E-85 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 PA257_0450 9433f0a69551f271c5f8d5c3721884fc 223 SUPERFAMILY SSF52540 1 218 1.06E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 2.4E-17 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.4E-17 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 2.4E-17 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 2.4E-17 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 Pfam PF00579 tRNA synthetases class I (W and Y) 3 243 9.3E-50 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 SUPERFAMILY SSF52374 4 333 5.18E-76 T 12-10-2018 PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 Gene3D G3DSA:1.10.240.10 199 301 2.7E-109 T 12-10-2018 PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 334 37.196 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 333 3.8E-93 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 Gene3D G3DSA:3.40.50.620 4 333 2.7E-109 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_5506 0bf038b2558c472a6ce7d20d636f97a5 448 SUPERFAMILY SSF160113 356 398 2.49E-6 T 12-10-2018 IPR036913 YegP-like superfamily PA257_0246 917d83d2a249c43f68e4531945a925a4 496 SUPERFAMILY SSF53720 15 494 4.45E-168 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_0246 917d83d2a249c43f68e4531945a925a4 496 Gene3D G3DSA:3.40.605.10 31 490 3.5E-177 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_0246 917d83d2a249c43f68e4531945a925a4 496 Gene3D G3DSA:3.40.309.10 268 460 3.5E-177 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_0246 917d83d2a249c43f68e4531945a925a4 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_0246 917d83d2a249c43f68e4531945a925a4 496 Pfam PF00171 Aldehyde dehydrogenase family 32 490 4.8E-168 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_0246 917d83d2a249c43f68e4531945a925a4 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_2300 d7eb87ceb05a7c2596fc06ce32a9d36c 209 Pfam PF10972 Peptidoglycan-binding protein, CsiV 61 173 5.3E-19 T 12-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV PA257_6612 0010937f7e55d982aace5b5dd1244949 412 Pfam PF07219 HemY protein N-terminus 27 131 1.2E-25 T 12-10-2018 IPR010817 HemY, N-terminal PA257_6612 0010937f7e55d982aace5b5dd1244949 412 Gene3D G3DSA:1.25.40.10 66 214 4.4E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6612 0010937f7e55d982aace5b5dd1244949 412 Gene3D G3DSA:1.25.40.10 245 400 1.2E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6612 0010937f7e55d982aace5b5dd1244949 412 SUPERFAMILY SSF48452 92 365 4.11E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6612 0010937f7e55d982aace5b5dd1244949 412 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 5 393 5.2E-107 T 12-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 PA257_6449 c73a94fe37e0036f271c8ba150568efd 257 Pfam PF00005 ABC transporter 23 182 2.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6449 c73a94fe37e0036f271c8ba150568efd 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6449 c73a94fe37e0036f271c8ba150568efd 257 SMART SM00382 32 230 1.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6449 c73a94fe37e0036f271c8ba150568efd 257 Gene3D G3DSA:3.40.50.300 4 257 6.8E-79 T 12-10-2018 PA257_6449 c73a94fe37e0036f271c8ba150568efd 257 SUPERFAMILY SSF52540 8 252 8.23E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6449 c73a94fe37e0036f271c8ba150568efd 257 PIRSF PIRSF039085 4 257 2.6E-116 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PA257_1447 29e30107d93f37651269762f3e2f709f 79 Pfam PF10038 Protein of unknown function (DUF2274) 4 68 1.4E-25 T 12-10-2018 IPR018733 Protein of unknown function DUF2274 PA257_5130 b36e444a2a278b468f86d900080ca513 799 SMART SM00382 375 520 3.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5130 b36e444a2a278b468f86d900080ca513 799 SUPERFAMILY SSF52540 337 614 1.01E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5130 b36e444a2a278b468f86d900080ca513 799 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 702 710 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 PA257_5130 b36e444a2a278b468f86d900080ca513 799 Gene3D G3DSA:1.10.8.60 519 611 3.5E-27 T 12-10-2018 PA257_5130 b36e444a2a278b468f86d900080ca513 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 729 748 1.6E-47 T 12-10-2018 PA257_5130 b36e444a2a278b468f86d900080ca513 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 620 636 1.6E-47 T 12-10-2018 PA257_5130 b36e444a2a278b468f86d900080ca513 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 383 402 1.6E-47 T 12-10-2018 PA257_5130 b36e444a2a278b468f86d900080ca513 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 752 770 1.6E-47 T 12-10-2018 PA257_5130 b36e444a2a278b468f86d900080ca513 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 699 718 1.6E-47 T 12-10-2018 PA257_5130 b36e444a2a278b468f86d900080ca513 799 Hamap MF_01973 Lon protease [lon]. 32 798 59.89 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 PA257_5130 b36e444a2a278b468f86d900080ca513 799 TIGRFAM TIGR00763 lon: endopeptidase La 34 797 4.1E-277 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PA257_5130 b36e444a2a278b468f86d900080ca513 799 PIRSF PIRSF001174 21 799 4.7E-273 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PA257_5130 b36e444a2a278b468f86d900080ca513 799 SUPERFAMILY SSF54211 620 797 7.21E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_5130 b36e444a2a278b468f86d900080ca513 799 Gene3D G3DSA:3.30.230.10 614 799 4.3E-71 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_5130 b36e444a2a278b468f86d900080ca513 799 Gene3D G3DSA:2.30.130.40 23 140 2.5E-13 T 12-10-2018 PA257_5130 b36e444a2a278b468f86d900080ca513 799 Gene3D G3DSA:3.40.50.300 340 518 3.9E-63 T 12-10-2018 PA257_5130 b36e444a2a278b468f86d900080ca513 799 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 32 227 3.6E-25 T 12-10-2018 IPR003111 Lon, substrate-binding domain PA257_5130 b36e444a2a278b468f86d900080ca513 799 SMART SM00464 31 228 8.5E-23 T 12-10-2018 IPR003111 Lon, substrate-binding domain PA257_5130 b36e444a2a278b468f86d900080ca513 799 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 597 797 1.3E-78 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 PA257_5130 b36e444a2a278b468f86d900080ca513 799 Gene3D G3DSA:1.20.58.1480 145 270 2.0E-29 T 12-10-2018 PA257_5130 b36e444a2a278b468f86d900080ca513 799 SUPERFAMILY SSF88697 32 227 6.46E-19 T 12-10-2018 IPR015947 PUA-like superfamily PA257_5130 b36e444a2a278b468f86d900080ca513 799 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 379 517 1.6E-22 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_4396 d946b076927cdab6c2343fbac3dcf309 306 Gene3D G3DSA:1.10.10.10 6 96 2.5E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4396 d946b076927cdab6c2343fbac3dcf309 306 SUPERFAMILY SSF46785 11 93 5.69E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4396 d946b076927cdab6c2343fbac3dcf309 306 Gene3D G3DSA:3.40.190.10 97 296 1.6E-45 T 12-10-2018 PA257_4396 d946b076927cdab6c2343fbac3dcf309 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 4.2E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4396 d946b076927cdab6c2343fbac3dcf309 306 SUPERFAMILY SSF53850 97 301 6.7E-31 T 12-10-2018 PA257_4396 d946b076927cdab6c2343fbac3dcf309 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 1.4E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4396 d946b076927cdab6c2343fbac3dcf309 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 1.4E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4396 d946b076927cdab6c2343fbac3dcf309 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 1.4E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4396 d946b076927cdab6c2343fbac3dcf309 306 Pfam PF03466 LysR substrate binding domain 102 294 2.0E-18 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4396 d946b076927cdab6c2343fbac3dcf309 306 Gene3D G3DSA:3.40.190.10 178 273 1.6E-45 T 12-10-2018 PA257_6512 1e46e9042f3690ad17b473c7a8db2e8c 352 Gene3D G3DSA:3.40.50.720 3 323 2.0E-129 T 12-10-2018 PA257_6512 1e46e9042f3690ad17b473c7a8db2e8c 352 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_6512 1e46e9042f3690ad17b473c7a8db2e8c 352 SUPERFAMILY SSF51735 1 335 9.26E-90 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6512 1e46e9042f3690ad17b473c7a8db2e8c 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 2.0E-100 T 12-10-2018 IPR016040 NAD(P)-binding domain PA257_6512 1e46e9042f3690ad17b473c7a8db2e8c 352 Gene3D G3DSA:3.90.25.10 201 332 2.0E-129 T 12-10-2018 PA257_6512 1e46e9042f3690ad17b473c7a8db2e8c 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 337 4.4E-151 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 PA257_3409 9f62af415188c1c086db63b3a7005d06 402 SUPERFAMILY SSF53756 1 395 1.22E-48 T 12-10-2018 PA257_3409 9f62af415188c1c086db63b3a7005d06 402 Pfam PF13692 Glycosyl transferases group 1 222 359 5.2E-20 T 12-10-2018 PA257_3409 9f62af415188c1c086db63b3a7005d06 402 Pfam PF13579 Glycosyl transferase 4-like domain 16 206 8.9E-25 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PA257_3409 9f62af415188c1c086db63b3a7005d06 402 Gene3D G3DSA:3.40.50.2000 220 394 1.2E-14 T 12-10-2018 PA257_3409 9f62af415188c1c086db63b3a7005d06 402 Gene3D G3DSA:3.40.50.2000 1 219 1.8E-23 T 12-10-2018 PA257_5102 068b94b307ebdc6cb1835e3f1068156c 273 Pfam PF00248 Aldo/keto reductase family 15 260 3.5E-54 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain PA257_5102 068b94b307ebdc6cb1835e3f1068156c 273 SUPERFAMILY SSF51430 8 262 6.68E-79 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_5102 068b94b307ebdc6cb1835e3f1068156c 273 PIRSF PIRSF000097 1 116 8.8E-18 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_5102 068b94b307ebdc6cb1835e3f1068156c 273 PIRSF PIRSF000097 113 269 5.3E-21 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_5102 068b94b307ebdc6cb1835e3f1068156c 273 Gene3D G3DSA:3.20.20.100 1 273 1.8E-95 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_5102 068b94b307ebdc6cb1835e3f1068156c 273 PRINTS PR00069 Aldo-keto reductase signature 196 220 4.5E-17 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_5102 068b94b307ebdc6cb1835e3f1068156c 273 PRINTS PR00069 Aldo-keto reductase signature 95 113 4.5E-17 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_5102 068b94b307ebdc6cb1835e3f1068156c 273 PRINTS PR00069 Aldo-keto reductase signature 39 63 4.5E-17 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_5102 068b94b307ebdc6cb1835e3f1068156c 273 PRINTS PR00069 Aldo-keto reductase signature 125 142 4.5E-17 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_5798 6fe6c99cd0ec931989e57c920aaafeba 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 277 1.7E-65 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 PA257_5798 6fe6c99cd0ec931989e57c920aaafeba 332 Gene3D G3DSA:3.40.190.170 27 329 1.4E-79 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PA257_5798 6fe6c99cd0ec931989e57c920aaafeba 332 PIRSF PIRSF006470 1 331 1.0E-117 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 PA257_5798 6fe6c99cd0ec931989e57c920aaafeba 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 314 7.7E-96 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PA257_3089 070842849ebf986bca6cbf2194bdbd6b 204 SUPERFAMILY SSF46689 2 70 9.23E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3089 070842849ebf986bca6cbf2194bdbd6b 204 Gene3D G3DSA:1.10.10.60 1 70 9.7E-24 T 12-10-2018 PA257_3089 070842849ebf986bca6cbf2194bdbd6b 204 Gene3D G3DSA:1.10.357.10 71 198 2.1E-33 T 12-10-2018 PA257_3089 070842849ebf986bca6cbf2194bdbd6b 204 SUPERFAMILY SSF48498 81 195 4.79E-27 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_3089 070842849ebf986bca6cbf2194bdbd6b 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 9.8E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2263 b84525bb4037581a774a22c96d1c4ddc 288 Gene3D G3DSA:3.60.15.10 23 285 6.8E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_2263 b84525bb4037581a774a22c96d1c4ddc 288 Pfam PF00753 Metallo-beta-lactamase superfamily 51 272 1.3E-27 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_2263 b84525bb4037581a774a22c96d1c4ddc 288 SUPERFAMILY SSF56281 48 276 2.49E-34 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_2263 b84525bb4037581a774a22c96d1c4ddc 288 SMART SM00849 54 272 7.9E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_4473 b70e9ceb00e2a5d225e6129ce76bfeae 732 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 715 732 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_4473 b70e9ceb00e2a5d225e6129ce76bfeae 732 SUPERFAMILY SSF56935 35 732 1.01E-131 T 12-10-2018 PA257_4473 b70e9ceb00e2a5d225e6129ce76bfeae 732 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 732 2.6E-110 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_4473 b70e9ceb00e2a5d225e6129ce76bfeae 732 Gene3D G3DSA:2.170.130.10 53 182 6.2E-40 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_4473 b70e9ceb00e2a5d225e6129ce76bfeae 732 Pfam PF00593 TonB dependent receptor 247 728 4.5E-62 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_4473 b70e9ceb00e2a5d225e6129ce76bfeae 732 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 169 9.7E-19 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_4473 b70e9ceb00e2a5d225e6129ce76bfeae 732 Gene3D G3DSA:2.40.170.20 183 732 4.8E-129 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_0454 01c62b50ee3da7c115057ad704f4495d 243 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 15 234 3.3E-104 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_0454 01c62b50ee3da7c115057ad704f4495d 243 Gene3D G3DSA:1.10.3810.10 56 235 9.9E-47 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_0454 01c62b50ee3da7c115057ad704f4495d 243 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 15 235 41.875 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_0454 01c62b50ee3da7c115057ad704f4495d 243 Pfam PF00912 Transglycosylase 65 229 5.1E-46 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_0454 01c62b50ee3da7c115057ad704f4495d 243 SUPERFAMILY SSF53955 55 233 6.75E-57 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_0701 1d8de5ede46d0aa326c04a7e5fe03b56 255 SUPERFAMILY SSF53335 15 207 5.27E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0701 1d8de5ede46d0aa326c04a7e5fe03b56 255 Gene3D G3DSA:3.40.50.150 10 243 1.3E-36 T 12-10-2018 PA257_0701 1d8de5ede46d0aa326c04a7e5fe03b56 255 Pfam PF08241 Methyltransferase domain 47 135 3.2E-16 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PA257_6628 e8747ff19f1c916d90bbec0785373ac2 232 PIRSF PIRSF032817 1 232 8.7E-109 T 12-10-2018 IPR017008 Uncharacterised conserved protein UCP032817 PA257_3760 920ed61775adc036157d6fc4f89b3c6b 225 Pfam PF00072 Response regulator receiver domain 3 115 1.0E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3760 920ed61775adc036157d6fc4f89b3c6b 225 Gene3D G3DSA:3.40.50.12740 1 208 5.7E-58 T 12-10-2018 PA257_3760 920ed61775adc036157d6fc4f89b3c6b 225 SUPERFAMILY SSF46894 142 208 1.12E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_3760 920ed61775adc036157d6fc4f89b3c6b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 5.3E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3760 920ed61775adc036157d6fc4f89b3c6b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 5.3E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3760 920ed61775adc036157d6fc4f89b3c6b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 5.3E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3760 920ed61775adc036157d6fc4f89b3c6b 225 SMART SM00448 1 114 7.6E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3760 920ed61775adc036157d6fc4f89b3c6b 225 SUPERFAMILY SSF52172 1 129 7.54E-34 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3760 920ed61775adc036157d6fc4f89b3c6b 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 1.3E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3760 920ed61775adc036157d6fc4f89b3c6b 225 SMART SM00421 145 202 3.6E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1373 099ecce6d850cb5d08cd38e97bd7cca9 316 Pfam PF00248 Aldo/keto reductase family 16 313 1.6E-69 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain PA257_1373 099ecce6d850cb5d08cd38e97bd7cca9 316 SUPERFAMILY SSF51430 1 313 3.54E-95 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_1373 099ecce6d850cb5d08cd38e97bd7cca9 316 Gene3D G3DSA:3.20.20.100 1 316 2.9E-102 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_6205 98bb0ae6327d4851c4a6a055c7db7dbf 311 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 16 95 1.8E-24 T 12-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal PA257_6205 98bb0ae6327d4851c4a6a055c7db7dbf 311 Gene3D G3DSA:3.10.620.30 118 295 1.2E-45 T 12-10-2018 PA257_6205 98bb0ae6327d4851c4a6a055c7db7dbf 311 Pfam PF01841 Transglutaminase-like superfamily 165 260 3.9E-21 T 12-10-2018 IPR002931 Transglutaminase-like PA257_6205 98bb0ae6327d4851c4a6a055c7db7dbf 311 SMART SM00460 192 262 2.9E-23 T 12-10-2018 IPR002931 Transglutaminase-like PA257_6205 98bb0ae6327d4851c4a6a055c7db7dbf 311 SUPERFAMILY SSF54001 130 287 2.45E-44 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 Gene3D G3DSA:3.40.50.2300 245 375 2.3E-27 T 12-10-2018 PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 Gene3D G3DSA:3.30.70.270 376 540 1.2E-52 T 12-10-2018 PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 SMART SM00267 366 537 2.6E-55 T 12-10-2018 IPR000160 GGDEF domain PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 SUPERFAMILY SSF52172 246 378 7.26E-30 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 536 2.1E-46 T 12-10-2018 IPR000160 GGDEF domain PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 SUPERFAMILY SSF55073 382 539 5.49E-48 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 533 3.3E-41 T 12-10-2018 IPR000160 GGDEF domain PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 SMART SM00448 250 363 2.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 Pfam PF00072 Response regulator receiver domain 252 363 1.3E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 SUPERFAMILY SSF52172 134 243 3.22E-5 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6119 daafc09914968fb23bbe6aca45e9a83f 542 Gene3D G3DSA:3.40.50.2300 124 244 9.8E-7 T 12-10-2018 PA257_0554 7ba2446241b1c01dbfef043f13c596f9 240 SUPERFAMILY SSF75217 74 239 1.09E-53 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases PA257_0554 7ba2446241b1c01dbfef043f13c596f9 240 Gene3D G3DSA:3.40.1280.10 74 240 3.6E-62 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PA257_0554 7ba2446241b1c01dbfef043f13c596f9 240 Gene3D G3DSA:2.40.240.20 1 69 6.8E-22 T 12-10-2018 PA257_0554 7ba2446241b1c01dbfef043f13c596f9 240 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 19 237 1.1E-61 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PA257_0554 7ba2446241b1c01dbfef043f13c596f9 240 Pfam PF04452 RNA methyltransferase 19 233 5.6E-71 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PA257_0554 7ba2446241b1c01dbfef043f13c596f9 240 SUPERFAMILY SSF88697 3 69 7.46E-16 T 12-10-2018 IPR015947 PUA-like superfamily PA257_0554 7ba2446241b1c01dbfef043f13c596f9 240 PIRSF PIRSF015601 3 238 8.6E-59 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PA257_1633 8444ad5b6d6070f9052e052fac948308 185 Pfam PF04717 Type VI secretion system, phage-baseplate injector 6 116 1.4E-40 T 12-10-2018 IPR006531 Gp5 N-terminal PA257_1633 8444ad5b6d6070f9052e052fac948308 185 Gene3D G3DSA:2.40.50.230 3 86 1.4E-21 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_1633 8444ad5b6d6070f9052e052fac948308 185 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 185 2.8E-47 T 12-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 PA257_3515 4d425753611652479153f2ae2a23bd02 440 SUPERFAMILY SSF103473 18 425 3.01E-72 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3515 4d425753611652479153f2ae2a23bd02 440 Pfam PF07690 Major Facilitator Superfamily 26 390 3.7E-42 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3515 4d425753611652479153f2ae2a23bd02 440 Gene3D G3DSA:1.20.1250.20 5 427 3.9E-67 T 12-10-2018 PA257_5875 370c51593aba0662bb42b45fde4afa98 735 SUPERFAMILY SSF52540 222 665 1.96E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5875 370c51593aba0662bb42b45fde4afa98 735 Gene3D G3DSA:3.40.50.300 215 411 2.6E-14 T 12-10-2018 PA257_5875 370c51593aba0662bb42b45fde4afa98 735 Pfam PF13538 UvrD-like helicase C-terminal domain 610 659 1.1E-8 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain PA257_5875 370c51593aba0662bb42b45fde4afa98 735 Gene3D G3DSA:3.40.50.300 450 683 7.2E-16 T 12-10-2018 PA257_3100 6c3d316e2b89532293f10029e5c5f4cf 313 Pfam PF13557 Putative MetA-pathway of phenol degradation 65 309 2.3E-56 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative PA257_4090 8157bdf364690f1b52542098e922b13d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 192 205 8.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_4090 8157bdf364690f1b52542098e922b13d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_4090 8157bdf364690f1b52542098e922b13d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 8.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_4090 8157bdf364690f1b52542098e922b13d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 115 128 8.0E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_4090 8157bdf364690f1b52542098e922b13d 225 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 2 222 42.895 T 12-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 PA257_4090 8157bdf364690f1b52542098e922b13d 225 Gene3D G3DSA:1.10.720.60 17 100 1.9E-73 T 12-10-2018 PA257_4090 8157bdf364690f1b52542098e922b13d 225 SUPERFAMILY SSF56784 1 222 2.07E-60 T 12-10-2018 IPR036412 HAD-like superfamily PA257_4090 8157bdf364690f1b52542098e922b13d 225 Gene3D G3DSA:3.40.50.1000 5 208 1.9E-73 T 12-10-2018 IPR023214 HAD superfamily PA257_4090 8157bdf364690f1b52542098e922b13d 225 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 214 6.5E-80 T 12-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 PA257_1982 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:3.40.50.980 47 373 4.6E-116 T 12-10-2018 PA257_1982 385cef239568202fe5ab91ed38c3b06c 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_1982 385cef239568202fe5ab91ed38c3b06c 562 Pfam PF00501 AMP-binding enzyme 31 461 1.1E-106 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_1982 385cef239568202fe5ab91ed38c3b06c 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 545 2.9E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_1982 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:3.30.300.310 457 560 1.1E-29 T 12-10-2018 PA257_1982 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:2.30.38.10 374 454 4.6E-116 T 12-10-2018 PA257_1982 385cef239568202fe5ab91ed38c3b06c 562 SUPERFAMILY SSF56801 18 557 3.01E-149 T 12-10-2018 PA257_1982 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:3.40.50.980 52 228 4.6E-116 T 12-10-2018 PA257_2801 95901fbb4aa022b6d0f1199d4dbf9d2a 154 SUPERFAMILY SSF55200 67 154 5.62E-33 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 PA257_2801 95901fbb4aa022b6d0f1199d4dbf9d2a 154 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 153 5.3E-60 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PA257_2801 95901fbb4aa022b6d0f1199d4dbf9d2a 154 Gene3D G3DSA:3.10.20.80 1 58 2.8E-23 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PA257_2801 95901fbb4aa022b6d0f1199d4dbf9d2a 154 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 56 5.2E-23 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PA257_2801 95901fbb4aa022b6d0f1199d4dbf9d2a 154 SUPERFAMILY SSF54364 1 61 1.44E-21 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PA257_2801 95901fbb4aa022b6d0f1199d4dbf9d2a 154 Gene3D G3DSA:3.30.110.10 59 154 1.5E-37 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 PA257_2801 95901fbb4aa022b6d0f1199d4dbf9d2a 154 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 153 25.14 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PA257_2801 95901fbb4aa022b6d0f1199d4dbf9d2a 154 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 67 151 2.1E-37 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 PA257_6198 75c93237e1ba70955a4da3473c7838e9 399 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 399 51.238 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PA257_6198 75c93237e1ba70955a4da3473c7838e9 399 PIRSF PIRSF000484 1 383 6.9E-65 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 PA257_6198 75c93237e1ba70955a4da3473c7838e9 399 Gene3D G3DSA:3.20.140.10 1 399 3.1E-170 T 12-10-2018 PA257_6198 75c93237e1ba70955a4da3473c7838e9 399 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 398 4.1E-155 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PA257_6198 75c93237e1ba70955a4da3473c7838e9 399 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 171 398 9.1E-89 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 PA257_6198 75c93237e1ba70955a4da3473c7838e9 399 SUPERFAMILY SSF54675 5 139 5.3E-42 T 12-10-2018 PA257_6198 75c93237e1ba70955a4da3473c7838e9 399 SUPERFAMILY SSF51690 122 397 2.35E-91 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PA257_4134 f96431b4b17a3d688393e66dc4fd0140 573 TIGRFAM TIGR00815 sulP: sulfate permease 8 547 3.3E-126 T 12-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 PA257_4134 f96431b4b17a3d688393e66dc4fd0140 573 Pfam PF01740 STAS domain 439 546 4.8E-18 T 12-10-2018 IPR002645 STAS domain PA257_4134 f96431b4b17a3d688393e66dc4fd0140 573 Gene3D G3DSA:3.30.750.24 435 555 8.8E-27 T 12-10-2018 IPR036513 STAS domain superfamily PA257_4134 f96431b4b17a3d688393e66dc4fd0140 573 SUPERFAMILY SSF52091 441 552 1.29E-15 T 12-10-2018 IPR036513 STAS domain superfamily PA257_4134 f96431b4b17a3d688393e66dc4fd0140 573 Pfam PF00916 Sulfate permease family 21 388 5.2E-93 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PA257_1074 54e5b882ad38f8688dd9eb27b5d43fd3 222 SUPERFAMILY SSF46894 149 219 2.24E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_1074 54e5b882ad38f8688dd9eb27b5d43fd3 222 Gene3D G3DSA:1.10.10.10 103 222 5.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1074 54e5b882ad38f8688dd9eb27b5d43fd3 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 218 9.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1074 54e5b882ad38f8688dd9eb27b5d43fd3 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 2.3E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1074 54e5b882ad38f8688dd9eb27b5d43fd3 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 2.3E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1074 54e5b882ad38f8688dd9eb27b5d43fd3 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 2.3E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1074 54e5b882ad38f8688dd9eb27b5d43fd3 222 SMART SM00421 163 220 4.7E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 SUPERFAMILY SSF46894 201 262 7.82E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 239 251 1.2E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 223 1.2E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 223 239 1.2E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 Gene3D G3DSA:1.10.10.10 198 271 1.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 SMART SM00448 11 126 1.4E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 Gene3D G3DSA:3.40.50.2300 8 151 5.4E-24 T 12-10-2018 PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 SUPERFAMILY SSF52172 11 163 2.56E-26 T 12-10-2018 IPR011006 CheY-like superfamily PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 SMART SM00421 206 263 2.4E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 Pfam PF00196 Bacterial regulatory proteins, luxR family 209 261 3.4E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_5357 11895cf963ffcfab1a2f0ed1c0ddea0e 277 Pfam PF00072 Response regulator receiver domain 13 124 4.6E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5254 fcb0a9b781a834f8e7d3893967d157e1 254 SUPERFAMILY SSF53098 72 192 1.29E-5 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_5254 fcb0a9b781a834f8e7d3893967d157e1 254 Pfam PF13610 DDE domain 73 211 3.9E-50 T 12-10-2018 IPR032874 DDE domain PA257_0399 1ba39fa2b630ba5aa5a381d7c5c43eaa 241 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PA257_0399 1ba39fa2b630ba5aa5a381d7c5c43eaa 241 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 157 2.1E-7 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_0399 1ba39fa2b630ba5aa5a381d7c5c43eaa 241 SUPERFAMILY SSF51161 40 198 1.66E-34 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_0399 1ba39fa2b630ba5aa5a381d7c5c43eaa 241 Gene3D G3DSA:2.160.10.10 30 216 3.2E-45 T 12-10-2018 PA257_4645 837acdca475ff46da2d663cc72882d7b 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 9 383 51.892 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 PA257_4645 837acdca475ff46da2d663cc72882d7b 383 SUPERFAMILY SSF55031 187 296 4.04E-30 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PA257_4645 837acdca475ff46da2d663cc72882d7b 383 Pfam PF01546 Peptidase family M20/M25/M40 69 379 4.4E-41 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 PA257_4645 837acdca475ff46da2d663cc72882d7b 383 Gene3D G3DSA:3.30.70.360 187 300 2.4E-126 T 12-10-2018 PA257_4645 837acdca475ff46da2d663cc72882d7b 383 Gene3D G3DSA:3.40.630.10 14 370 2.4E-126 T 12-10-2018 PA257_4645 837acdca475ff46da2d663cc72882d7b 383 Pfam PF07687 Peptidase dimerisation domain 183 289 1.3E-27 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain PA257_4645 837acdca475ff46da2d663cc72882d7b 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 12 381 3.4E-162 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 PA257_4645 837acdca475ff46da2d663cc72882d7b 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 143 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PA257_4645 837acdca475ff46da2d663cc72882d7b 383 SUPERFAMILY SSF53187 9 382 1.07E-64 T 12-10-2018 PA257_5322 535e5c93fac504cf8b1ebbad95d742a0 149 SUPERFAMILY SSF54523 45 147 2.09E-34 T 12-10-2018 PA257_5322 535e5c93fac504cf8b1ebbad95d742a0 149 Pfam PF08334 Type II secretion system (T2SS), protein G 41 147 3.7E-40 T 12-10-2018 IPR013545 Type II secretion system protein G PA257_5322 535e5c93fac504cf8b1ebbad95d742a0 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5322 535e5c93fac504cf8b1ebbad95d742a0 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 1.1E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5322 535e5c93fac504cf8b1ebbad95d742a0 149 Gene3D G3DSA:3.30.700.10 41 147 9.3E-37 T 12-10-2018 PA257_5322 535e5c93fac504cf8b1ebbad95d742a0 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 38 1.8E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5322 535e5c93fac504cf8b1ebbad95d742a0 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 18 43 3.1E-16 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PA257_5322 535e5c93fac504cf8b1ebbad95d742a0 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 54 72 3.1E-16 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PA257_5322 535e5c93fac504cf8b1ebbad95d742a0 149 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 17 148 4.6E-55 T 12-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 PA257_0828 9b9df0300477dc738c38223795cda693 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0828 9b9df0300477dc738c38223795cda693 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.331 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PA257_0828 9b9df0300477dc738c38223795cda693 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 8.4E-68 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PA257_0828 9b9df0300477dc738c38223795cda693 156 Gene3D G3DSA:1.10.455.10 2 155 1.3E-60 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily PA257_0828 9b9df0300477dc738c38223795cda693 156 PIRSF PIRSF002122 2 156 2.6E-59 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 PA257_0828 9b9df0300477dc738c38223795cda693 156 SUPERFAMILY SSF47973 6 149 7.72E-60 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily PA257_0828 9b9df0300477dc738c38223795cda693 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 7.7E-67 T 12-10-2018 IPR023798 Ribosomal protein S7 domain PA257_4839 9ed648af77347b21505349ff61fc83cc 565 Gene3D G3DSA:3.40.1090.20 275 347 3.0E-28 T 12-10-2018 PA257_4839 9ed648af77347b21505349ff61fc83cc 565 Gene3D G3DSA:3.40.1090.20 1 215 6.9E-63 T 12-10-2018 PA257_4839 9ed648af77347b21505349ff61fc83cc 565 Gene3D G3DSA:3.30.720.80 348 378 2.1E-14 T 12-10-2018 PA257_4839 9ed648af77347b21505349ff61fc83cc 565 SUPERFAMILY SSF52151 3 241 6.02E-19 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PA257_4839 9ed648af77347b21505349ff61fc83cc 565 Pfam PF01734 Patatin-like phospholipase 6 234 1.2E-16 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 PA257_4839 9ed648af77347b21505349ff61fc83cc 565 Gene3D G3DSA:1.20.1050.100 379 565 7.7E-85 T 12-10-2018 PA257_0208 5596cc08d5b2c2c444938bc73b7b2211 310 Gene3D G3DSA:1.10.10.10 3 88 7.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0208 5596cc08d5b2c2c444938bc73b7b2211 310 SUPERFAMILY SSF53850 88 298 4.52E-38 T 12-10-2018 PA257_0208 5596cc08d5b2c2c444938bc73b7b2211 310 Gene3D G3DSA:3.40.190.290 91 296 1.0E-52 T 12-10-2018 PA257_0208 5596cc08d5b2c2c444938bc73b7b2211 310 SUPERFAMILY SSF46785 4 88 3.34E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0208 5596cc08d5b2c2c444938bc73b7b2211 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 9.8E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0208 5596cc08d5b2c2c444938bc73b7b2211 310 Pfam PF03466 LysR substrate binding domain 88 294 1.5E-38 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2507 02fdc27d3817602d9b8442460e562603 124 Pfam PF12553 Protein of unknown function (DUF3742) 1 104 6.1E-34 T 12-10-2018 IPR022213 Protein of unknown function DUF3742 PA257_5673 6cd144223ca44834e3e1c68db6ac5d21 128 SUPERFAMILY SSF51306 4 122 7.32E-34 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_5673 6cd144223ca44834e3e1c68db6ac5d21 128 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 49 60 2.6E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PA257_5673 6cd144223ca44834e3e1c68db6ac5d21 128 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 77 89 2.6E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PA257_5673 6cd144223ca44834e3e1c68db6ac5d21 128 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 38 48 2.6E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PA257_5673 6cd144223ca44834e3e1c68db6ac5d21 128 Gene3D G3DSA:2.10.109.10 11 125 7.5E-40 T 12-10-2018 PA257_5673 6cd144223ca44834e3e1c68db6ac5d21 128 Pfam PF00717 Peptidase S24-like 44 106 5.8E-16 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_4794 7f0f657e37f810fc93e394a4b088cf20 428 Gene3D G3DSA:3.30.9.10 123 344 1.8E-69 T 12-10-2018 PA257_4794 7f0f657e37f810fc93e394a4b088cf20 428 Gene3D G3DSA:3.50.50.60 30 382 1.8E-69 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4794 7f0f657e37f810fc93e394a4b088cf20 428 Pfam PF01266 FAD dependent oxidoreductase 30 381 2.8E-50 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_4794 7f0f657e37f810fc93e394a4b088cf20 428 SUPERFAMILY SSF51905 29 398 1.23E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1598 d267da443fa4a99a48a478e531abcf81 297 Gene3D G3DSA:3.10.350.10 67 110 3.5E-13 T 12-10-2018 IPR036779 LysM domain superfamily PA257_1598 d267da443fa4a99a48a478e531abcf81 297 SMART SM00257 68 112 1.9E-11 T 12-10-2018 IPR018392 LysM domain PA257_1598 d267da443fa4a99a48a478e531abcf81 297 Pfam PF01551 Peptidase family M23 197 290 3.0E-30 T 12-10-2018 IPR016047 Peptidase M23 PA257_1598 d267da443fa4a99a48a478e531abcf81 297 Gene3D G3DSA:2.70.70.10 155 297 1.9E-35 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_1598 d267da443fa4a99a48a478e531abcf81 297 Pfam PF01476 LysM domain 69 109 2.6E-13 T 12-10-2018 IPR018392 LysM domain PA257_1598 d267da443fa4a99a48a478e531abcf81 297 SUPERFAMILY SSF51261 68 294 1.15E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_2482 0f9f94ea0b8bbb76ff69246627fb48c4 533 SUPERFAMILY SSF103473 19 520 2.88E-34 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_2482 0f9f94ea0b8bbb76ff69246627fb48c4 533 Gene3D G3DSA:1.20.1250.20 21 217 6.8E-17 T 12-10-2018 PA257_2482 0f9f94ea0b8bbb76ff69246627fb48c4 533 Gene3D G3DSA:1.20.1250.20 218 449 8.7E-8 T 12-10-2018 PA257_2482 0f9f94ea0b8bbb76ff69246627fb48c4 533 Pfam PF07690 Major Facilitator Superfamily 38 432 3.2E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0369 6b6dd5587c9b1db5a1b9025358cb30fa 303 SUPERFAMILY SSF161098 15 293 6.41E-56 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0369 6b6dd5587c9b1db5a1b9025358cb30fa 303 Gene3D G3DSA:1.10.3720.10 15 298 1.1E-53 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0369 6b6dd5587c9b1db5a1b9025358cb30fa 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 289 6.0E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0174 281c6ffbf9cd9bef94e3629af5eed7b5 316 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 312 4.5E-110 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 PA257_0174 281c6ffbf9cd9bef94e3629af5eed7b5 316 Pfam PF00962 Adenosine/AMP deaminase 8 310 1.3E-72 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 PA257_0174 281c6ffbf9cd9bef94e3629af5eed7b5 316 Hamap MF_01962 Adenine deaminase. 4 316 86.737 T 12-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 PA257_0174 281c6ffbf9cd9bef94e3629af5eed7b5 316 Gene3D G3DSA:3.20.20.140 1 316 2.4E-103 T 12-10-2018 PA257_0174 281c6ffbf9cd9bef94e3629af5eed7b5 316 SUPERFAMILY SSF51556 2 312 2.69E-84 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_4276 2257b730ccedd69223f7343a2ebcfa78 169 Gene3D G3DSA:2.60.120.480 1 169 1.0E-65 T 12-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PA257_4276 2257b730ccedd69223f7343a2ebcfa78 169 Hamap MF_00616 Ureidoglycolate lyase [allA]. 2 163 42.469 T 12-10-2018 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PA257_4276 2257b730ccedd69223f7343a2ebcfa78 169 PIRSF PIRSF017306 2 162 1.6E-49 T 12-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PA257_4276 2257b730ccedd69223f7343a2ebcfa78 169 SUPERFAMILY SSF51182 1 162 3.47E-58 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4276 2257b730ccedd69223f7343a2ebcfa78 169 Pfam PF04115 Ureidoglycolate lyase 2 158 2.9E-53 T 12-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PA257_6424 2c543e73f4887126b1712f5dff7869c8 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 3.3E-245 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_6424 2c543e73f4887126b1712f5dff7869c8 515 Pfam PF01676 Metalloenzyme superfamily 6 501 2.0E-79 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 PA257_6424 2c543e73f4887126b1712f5dff7869c8 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 300 7.4E-80 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_6424 2c543e73f4887126b1712f5dff7869c8 515 SUPERFAMILY SSF64158 79 311 1.7E-83 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_6424 2c543e73f4887126b1712f5dff7869c8 515 PIRSF PIRSF001492 1 514 3.9E-204 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_6424 2c543e73f4887126b1712f5dff7869c8 515 Gene3D G3DSA:3.40.1450.10 79 313 1.3E-217 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_6424 2c543e73f4887126b1712f5dff7869c8 515 SUPERFAMILY SSF53649 5 511 2.88E-77 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_6424 2c543e73f4887126b1712f5dff7869c8 515 Gene3D G3DSA:3.40.720.10 7 510 1.3E-217 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_6424 2c543e73f4887126b1712f5dff7869c8 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 51.229 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PA257_4237 523296e87c36413c827d03aa1db6acd4 471 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 352 468 5.7E-27 T 12-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain PA257_4237 523296e87c36413c827d03aa1db6acd4 471 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 39 468 7.4E-177 T 12-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 PA257_4237 523296e87c36413c827d03aa1db6acd4 471 Gene3D G3DSA:2.60.40.10 354 468 2.2E-33 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_4237 523296e87c36413c827d03aa1db6acd4 471 SUPERFAMILY SSF54862 103 352 7.53E-32 T 12-10-2018 PA257_4237 523296e87c36413c827d03aa1db6acd4 471 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 270 281 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_4237 523296e87c36413c827d03aa1db6acd4 471 Pfam PF12801 4Fe-4S binding domain 93 125 1.0E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_4237 523296e87c36413c827d03aa1db6acd4 471 Pfam PF13746 4Fe-4S dicluster domain 217 322 1.2E-45 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 SUPERFAMILY SSF52540 148 390 1.74E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 173 186 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:3.40.50.2300 1 128 1.2E-30 T 12-10-2018 PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:3.40.50.300 141 319 1.6E-67 T 12-10-2018 PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 SMART SM00382 169 334 7.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 SMART SM00448 2 109 6.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 Pfam PF00072 Response regulator receiver domain 4 109 2.1E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 SUPERFAMILY SSF52172 1 194 3.98E-37 T 12-10-2018 IPR011006 CheY-like superfamily PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:1.10.8.60 320 397 9.6E-22 T 12-10-2018 PA257_5940 ebd2e127f05389986b8dc2c6108cb362 478 Pfam PF00158 Sigma-54 interaction domain 149 315 3.0E-73 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_6845 c5f88857c998251441d7a64baa2aa033 67 Pfam PF06568 Domain of unknown function (DUF1127) 22 57 7.7E-10 T 12-10-2018 IPR009506 Protein of unknown function DUF1127 PA257_0332 05cc5b9547e61f704b90841093f68065 473 SMART SM00345 17 76 6.4E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0332 05cc5b9547e61f704b90841093f68065 473 SUPERFAMILY SSF46785 10 80 1.03E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0332 05cc5b9547e61f704b90841093f68065 473 SUPERFAMILY SSF53383 117 472 2.3E-83 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_0332 05cc5b9547e61f704b90841093f68065 473 Gene3D G3DSA:3.40.640.10 108 465 6.9E-112 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_0332 05cc5b9547e61f704b90841093f68065 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0332 05cc5b9547e61f704b90841093f68065 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0332 05cc5b9547e61f704b90841093f68065 473 Pfam PF00155 Aminotransferase class I and II 140 391 3.4E-17 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_0332 05cc5b9547e61f704b90841093f68065 473 Gene3D G3DSA:1.10.10.10 9 79 1.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0332 05cc5b9547e61f704b90841093f68065 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 2.4E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0790 902d81795222cec74c793babab6bf0b7 215 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 14 215 30.303 T 12-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 PA257_0790 902d81795222cec74c793babab6bf0b7 215 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 53 212 9.2E-39 T 12-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 PA257_0790 902d81795222cec74c793babab6bf0b7 215 SUPERFAMILY SSF47240 51 183 8.57E-18 T 12-10-2018 IPR009078 Ferritin-like superfamily PA257_0790 902d81795222cec74c793babab6bf0b7 215 Gene3D G3DSA:1.20.1260.10 46 200 2.2E-9 T 12-10-2018 IPR012347 Ferritin-like PA257_1135 ba1b98a8347c8dcbc075e71305d7f6ac 213 Gene3D G3DSA:3.40.50.720 1 213 2.7E-61 T 12-10-2018 PA257_1135 ba1b98a8347c8dcbc075e71305d7f6ac 213 Pfam PF08732 HIM1 57 156 3.1E-7 T 12-10-2018 IPR014843 Protein Him1/Fmp52 PA257_1135 ba1b98a8347c8dcbc075e71305d7f6ac 213 SUPERFAMILY SSF51735 5 199 3.41E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2064 74e940b8dcb34b5222d605ae28008dbc 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 1.7E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2064 74e940b8dcb34b5222d605ae28008dbc 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 1.7E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2064 74e940b8dcb34b5222d605ae28008dbc 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.7E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2064 74e940b8dcb34b5222d605ae28008dbc 275 SUPERFAMILY SSF53474 5 261 4.09E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2064 74e940b8dcb34b5222d605ae28008dbc 275 Pfam PF12697 Alpha/beta hydrolase family 25 251 1.4E-25 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2064 74e940b8dcb34b5222d605ae28008dbc 275 Gene3D G3DSA:3.40.50.1820 13 262 1.7E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0347 2eaa629f78fe54de01bfde32abb4fddd 332 SUPERFAMILY SSF53850 22 330 1.26E-88 T 12-10-2018 PA257_0347 2eaa629f78fe54de01bfde32abb4fddd 332 Gene3D G3DSA:3.40.190.10 117 327 3.1E-134 T 12-10-2018 PA257_0347 2eaa629f78fe54de01bfde32abb4fddd 332 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 12-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 PA257_0347 2eaa629f78fe54de01bfde32abb4fddd 332 Pfam PF13531 Bacterial extracellular solute-binding protein 35 282 1.4E-44 T 12-10-2018 PA257_0347 2eaa629f78fe54de01bfde32abb4fddd 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 20 328 3.5E-141 T 12-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 PA257_0347 2eaa629f78fe54de01bfde32abb4fddd 332 Gene3D G3DSA:3.40.190.10 29 297 3.1E-134 T 12-10-2018 PA257_2033 faedd71e426a11c4199588692e8b5a1f 320 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 8 314 6.7E-118 T 12-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 PA257_2033 faedd71e426a11c4199588692e8b5a1f 320 Pfam PF00107 Zinc-binding dehydrogenase 146 260 2.0E-18 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_2033 faedd71e426a11c4199588692e8b5a1f 320 Gene3D G3DSA:3.90.180.10 11 313 1.6E-92 T 12-10-2018 PA257_2033 faedd71e426a11c4199588692e8b5a1f 320 SUPERFAMILY SSF51735 106 277 1.2E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2033 faedd71e426a11c4199588692e8b5a1f 320 SUPERFAMILY SSF50129 11 136 8.33E-37 T 12-10-2018 IPR011032 GroES-like superfamily PA257_2033 faedd71e426a11c4199588692e8b5a1f 320 Gene3D G3DSA:3.40.50.720 115 252 1.6E-92 T 12-10-2018 PA257_2033 faedd71e426a11c4199588692e8b5a1f 320 SMART SM00829 9 313 1.3E-41 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_2033 faedd71e426a11c4199588692e8b5a1f 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 82 1.1E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_4909 42ad07119cf7c2c015c85b4978485acd 742 SUPERFAMILY SSF56935 50 742 1.31E-130 T 12-10-2018 PA257_4909 42ad07119cf7c2c015c85b4978485acd 742 Pfam PF00593 TonB dependent receptor 273 740 4.3E-55 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_4909 42ad07119cf7c2c015c85b4978485acd 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 178 2.0E-29 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_4909 42ad07119cf7c2c015c85b4978485acd 742 Gene3D G3DSA:2.170.130.10 38 183 1.2E-43 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_4909 42ad07119cf7c2c015c85b4978485acd 742 Gene3D G3DSA:2.40.170.20 189 742 4.2E-203 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_4909 42ad07119cf7c2c015c85b4978485acd 742 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 725 742 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_4909 42ad07119cf7c2c015c85b4978485acd 742 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 742 1.7E-87 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_2904 de95082bcc43c0772979fcdbfae192c5 269 Gene3D G3DSA:3.40.50.150 38 219 2.1E-23 T 12-10-2018 PA257_2904 de95082bcc43c0772979fcdbfae192c5 269 SUPERFAMILY SSF53335 56 201 8.02E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2904 de95082bcc43c0772979fcdbfae192c5 269 Pfam PF08241 Methyltransferase domain 68 162 4.0E-16 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PA257_1090 5b004f674ff0d5f5d3c4be7c1ae48fe3 220 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 81 153 8.5E-16 T 12-10-2018 PA257_1090 5b004f674ff0d5f5d3c4be7c1ae48fe3 220 Gene3D G3DSA:3.40.50.150 38 193 2.3E-27 T 12-10-2018 PA257_1090 5b004f674ff0d5f5d3c4be7c1ae48fe3 220 SUPERFAMILY SSF53335 18 173 1.63E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5894 d65a5a1bbf24888e0acb37b6fe3c1229 218 Pfam PF04403 Paraquat-inducible protein A 57 208 4.1E-48 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like PA257_2164 3c2d9d46f2f830b407a9fbc826531359 285 SUPERFAMILY SSF53474 58 252 6.43E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2164 3c2d9d46f2f830b407a9fbc826531359 285 Pfam PF12146 Serine aminopeptidase, S33 68 177 9.0E-12 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 PA257_2164 3c2d9d46f2f830b407a9fbc826531359 285 Gene3D G3DSA:3.40.50.1820 55 267 1.6E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6779 90e5b2d6eccdcb27d3d9f63894f346a4 321 SUPERFAMILY SSF53474 49 291 1.61E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6779 90e5b2d6eccdcb27d3d9f63894f346a4 321 Gene3D G3DSA:3.40.50.1820 8 314 1.7E-72 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6779 90e5b2d6eccdcb27d3d9f63894f346a4 321 Pfam PF07859 alpha/beta hydrolase fold 82 287 8.2E-65 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 PA257_6779 90e5b2d6eccdcb27d3d9f63894f346a4 321 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 154 166 - T 12-10-2018 IPR033140 Lipase, GDXG, putative serine active site PA257_6965 bb2a3cc259d814df5fb4621c17e714ee 289 ProSitePatterns PS00449 ATP synthase a subunit signature. 217 226 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6965 bb2a3cc259d814df5fb4621c17e714ee 289 Gene3D G3DSA:1.20.120.220 98 288 1.7E-52 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6965 bb2a3cc259d814df5fb4621c17e714ee 289 SUPERFAMILY SSF81336 99 282 2.75E-39 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6965 bb2a3cc259d814df5fb4621c17e714ee 289 Pfam PF00119 ATP synthase A chain 51 282 1.1E-55 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6965 bb2a3cc259d814df5fb4621c17e714ee 289 Hamap MF_01393 ATP synthase subunit a [atpB]. 10 288 15.584 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6965 bb2a3cc259d814df5fb4621c17e714ee 289 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 283 4.3E-41 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_0844 d099d5dc95938583016e3358d4355599 179 PIRSF PIRSF002161 1 179 4.0E-64 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0844 d099d5dc95938583016e3358d4355599 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.121 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0844 d099d5dc95938583016e3358d4355599 179 Pfam PF00281 Ribosomal protein L5 24 80 7.7E-29 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0844 d099d5dc95938583016e3358d4355599 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0844 d099d5dc95938583016e3358d4355599 179 Gene3D G3DSA:3.30.1440.10 1 179 1.2E-77 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0844 d099d5dc95938583016e3358d4355599 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.2E-39 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0844 d099d5dc95938583016e3358d4355599 179 SUPERFAMILY SSF55282 3 179 1.22E-77 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_2047 16c891b14942ef63af778d83e5aa9465 312 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 4 306 1.3E-134 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 PA257_2047 16c891b14942ef63af778d83e5aa9465 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 297 5.3E-87 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PA257_2047 16c891b14942ef63af778d83e5aa9465 312 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 306 50.153 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 PA257_2047 16c891b14942ef63af778d83e5aa9465 312 PIRSF PIRSF026649 1 306 2.0E-105 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 0.009 T 12-10-2018 PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 Pfam PF00106 short chain dehydrogenase 5 189 3.0E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 SUPERFAMILY SSF51735 4 231 3.14E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6186 a1d68909b29bb75b6f83cb8bd7e33b31 253 Gene3D G3DSA:3.40.50.720 3 239 4.6E-69 T 12-10-2018 PA257_5819 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 32 50 1.4E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_5819 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 59 81 1.4E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_5819 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 13 32 1.4E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_5819 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 86 110 1.4E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_5819 0982c3fa320b4deb51c49e142c3fe78c 234 Pfam PF02308 MgtC family 11 131 5.2E-35 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_5819 0982c3fa320b4deb51c49e142c3fe78c 234 Gene3D G3DSA:3.30.70.260 142 234 1.6E-21 T 12-10-2018 PA257_6921 10852a19e0eef21520b14d1be3a91f85 160 Pfam PF03061 Thioesterase superfamily 23 96 2.5E-18 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_6921 10852a19e0eef21520b14d1be3a91f85 160 SUPERFAMILY SSF54637 4 154 6.56E-46 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6921 10852a19e0eef21520b14d1be3a91f85 160 Gene3D G3DSA:3.10.129.10 2 153 5.5E-59 T 12-10-2018 PA257_2464 88ea5b16c74d41b6e4035955aade0bbf 151 Gene3D G3DSA:1.10.10.10 7 149 4.0E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2464 88ea5b16c74d41b6e4035955aade0bbf 151 Pfam PF01047 MarR family 42 100 1.5E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_2464 88ea5b16c74d41b6e4035955aade0bbf 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 3.0E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_2464 88ea5b16c74d41b6e4035955aade0bbf 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 3.0E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_2464 88ea5b16c74d41b6e4035955aade0bbf 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 3.0E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_2464 88ea5b16c74d41b6e4035955aade0bbf 151 SMART SM00347 35 133 1.2E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_2464 88ea5b16c74d41b6e4035955aade0bbf 151 SUPERFAMILY SSF46785 8 148 2.61E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6547 41862d670f2454c5602c130b46b4825b 133 SUPERFAMILY SSF55174 10 105 1.9E-26 T 12-10-2018 PA257_6547 41862d670f2454c5602c130b46b4825b 133 Pfam PF01479 S4 domain 11 56 1.4E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_6547 41862d670f2454c5602c130b46b4825b 133 Gene3D G3DSA:3.10.290.10 3 110 1.8E-35 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PA257_6547 41862d670f2454c5602c130b46b4825b 133 PIRSF PIRSF016821 8 133 2.0E-38 T 12-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 PA257_6547 41862d670f2454c5602c130b46b4825b 133 SMART SM00363 11 74 5.9E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_3841 c692343e694a989fefb0e85e732d4b4d 175 Gene3D G3DSA:3.30.428.10 4 119 1.1E-13 T 12-10-2018 IPR036265 HIT-like superfamily PA257_3841 c692343e694a989fefb0e85e732d4b4d 175 SUPERFAMILY SSF54197 3 109 2.13E-16 T 12-10-2018 IPR036265 HIT-like superfamily PA257_1592 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SUPERFAMILY SSF50129 2 185 1.08E-72 T 12-10-2018 IPR011032 GroES-like superfamily PA257_1592 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Pfam PF00107 Zinc-binding dehydrogenase 198 325 5.4E-27 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_1592 8e9564a9cac7d4e23f9a1af9ecfc7911 370 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PA257_1592 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Gene3D G3DSA:3.40.50.720 175 313 1.4E-154 T 12-10-2018 PA257_1592 8e9564a9cac7d4e23f9a1af9ecfc7911 370 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 370 1.9E-224 T 12-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 PA257_1592 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Gene3D G3DSA:3.90.180.10 7 365 1.4E-154 T 12-10-2018 PA257_1592 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SMART SM00829 11 368 2.3E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_1592 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 155 2.9E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_1592 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SUPERFAMILY SSF50129 320 370 5.18E-11 T 12-10-2018 IPR011032 GroES-like superfamily PA257_1592 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SUPERFAMILY SSF51735 161 334 8.0E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6963 9dadd1e6e5ceeff5a57ce01c758673be 156 Gene3D G3DSA:1.20.5.620 62 122 1.9E-17 T 12-10-2018 PA257_6963 9dadd1e6e5ceeff5a57ce01c758673be 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 4.9E-48 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 PA257_6963 9dadd1e6e5ceeff5a57ce01c758673be 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.0E-37 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PA257_6963 9dadd1e6e5ceeff5a57ce01c758673be 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.008 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PA257_6963 9dadd1e6e5ceeff5a57ce01c758673be 156 SUPERFAMILY SSF81573 63 121 1.15E-14 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily PA257_2155 f318804de7c4d0e4e0527ce8b42787d5 519 Gene3D G3DSA:1.20.1250.20 269 505 3.2E-12 T 12-10-2018 PA257_2155 f318804de7c4d0e4e0527ce8b42787d5 519 SUPERFAMILY SSF103473 11 505 1.14E-58 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_2155 f318804de7c4d0e4e0527ce8b42787d5 519 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 500 1.0E-121 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 PA257_2155 f318804de7c4d0e4e0527ce8b42787d5 519 Pfam PF07690 Major Facilitator Superfamily 25 418 1.3E-44 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_2155 f318804de7c4d0e4e0527ce8b42787d5 519 Gene3D G3DSA:1.20.1720.10 20 226 2.2E-34 T 12-10-2018 PA257_5427 acaeb41b790d2a3fe00724837f717a13 352 Gene3D G3DSA:3.40.50.720 5 149 1.0E-27 T 12-10-2018 PA257_5427 acaeb41b790d2a3fe00724837f717a13 352 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 6 123 2.5E-11 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 PA257_5427 acaeb41b790d2a3fe00724837f717a13 352 SUPERFAMILY SSF51735 4 136 6.9E-17 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3637 d83945efdabeeb5fe1e6302b231355fc 318 PIRSF PIRSF018266 1 318 3.9E-64 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_3637 d83945efdabeeb5fe1e6302b231355fc 318 Gene3D G3DSA:2.60.120.1440 113 230 4.1E-6 T 12-10-2018 PA257_3637 d83945efdabeeb5fe1e6302b231355fc 318 Pfam PF04773 FecR protein 115 205 6.9E-12 T 12-10-2018 IPR006860 FecR protein PA257_3637 d83945efdabeeb5fe1e6302b231355fc 318 Pfam PF16220 Domain of unknown function (DUF4880) 12 51 2.3E-12 T 12-10-2018 IPR032623 FecR, N-terminal PA257_3513 6c2dc243e0dfb6515a0395da3881dda3 331 PIRSF PIRSF033905 1 331 1.9E-171 T 12-10-2018 IPR009645 Uncharacterised conserved protein GguC PA257_3513 6c2dc243e0dfb6515a0395da3881dda3 331 SUPERFAMILY SSF56529 112 316 9.01E-25 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_3513 6c2dc243e0dfb6515a0395da3881dda3 331 Gene3D G3DSA:3.90.850.10 128 320 1.4E-13 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_3231 c295f2f5e9973a73393998c01eaca77a 301 Gene3D G3DSA:1.10.3470.10 63 291 3.3E-8 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_3231 c295f2f5e9973a73393998c01eaca77a 301 Pfam PF00950 ABC 3 transport family 27 286 2.7E-51 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PA257_3231 c295f2f5e9973a73393998c01eaca77a 301 SUPERFAMILY SSF81345 19 283 3.79E-32 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_0320 6dc42f1305c160edf2763aed61e975c5 276 Pfam PF00589 Phage integrase family 119 261 1.5E-33 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_0320 6dc42f1305c160edf2763aed61e975c5 276 Gene3D G3DSA:1.10.150.130 1 66 1.1E-8 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_0320 6dc42f1305c160edf2763aed61e975c5 276 Gene3D G3DSA:1.10.443.10 67 273 9.1E-46 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_0320 6dc42f1305c160edf2763aed61e975c5 276 SUPERFAMILY SSF56349 2 269 2.35E-56 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 Gene3D G3DSA:1.10.540.10 5 118 3.1E-30 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 PIRSF PIRSF016578 3 83 3.8E-7 T 12-10-2018 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 PIRSF PIRSF016578 109 365 3.4E-13 T 12-10-2018 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 4.6E-30 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 SUPERFAMILY SSF56645 6 243 1.57E-78 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 Gene3D G3DSA:1.20.140.10 237 383 1.5E-56 T 12-10-2018 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 SUPERFAMILY SSF47203 229 380 2.9E-56 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 Gene3D G3DSA:2.40.110.10 120 236 8.5E-44 T 12-10-2018 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 5.2E-30 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_4151 1ca7458fb24cfd4e862ba8bb1581a242 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 378 2.0E-49 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_0368 64375893897fefd4c7a79411f630f6a8 384 Gene3D G3DSA:2.40.50.940 241 305 1.5E-8 T 12-10-2018 PA257_0368 64375893897fefd4c7a79411f630f6a8 384 Gene3D G3DSA:3.40.50.300 22 240 4.2E-68 T 12-10-2018 PA257_0368 64375893897fefd4c7a79411f630f6a8 384 SUPERFAMILY SSF50331 255 381 1.25E-15 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PA257_0368 64375893897fefd4c7a79411f630f6a8 384 SMART SM00382 47 230 1.2E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0368 64375893897fefd4c7a79411f630f6a8 384 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 53 382 8.1E-129 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PA257_0368 64375893897fefd4c7a79411f630f6a8 384 Pfam PF08402 TOBE domain 300 382 1.4E-16 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PA257_0368 64375893897fefd4c7a79411f630f6a8 384 Pfam PF00005 ABC transporter 39 180 9.6E-38 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0368 64375893897fefd4c7a79411f630f6a8 384 Gene3D G3DSA:2.40.50.140 306 350 1.5E-8 T 12-10-2018 PA257_0368 64375893897fefd4c7a79411f630f6a8 384 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0368 64375893897fefd4c7a79411f630f6a8 384 SUPERFAMILY SSF52540 22 260 4.91E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1345 374eedfb3eab45487ba11957389235df 375 SUPERFAMILY SSF51713 2 365 2.22E-160 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PA257_1345 374eedfb3eab45487ba11957389235df 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 368 1.4E-166 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PA257_1345 374eedfb3eab45487ba11957389235df 375 Gene3D G3DSA:3.20.20.105 1 368 8.5E-165 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PA257_1345 374eedfb3eab45487ba11957389235df 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 367 1.4E-158 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PA257_1345 374eedfb3eab45487ba11957389235df 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 362 1.1E-89 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PA257_1345 374eedfb3eab45487ba11957389235df 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 365 55.439 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PA257_5037 5e841f1f8e6e5b7dbb156dc6f240ef33 109 Pfam PF05135 Phage gp6-like head-tail connector protein 12 103 3.2E-16 T 12-10-2018 IPR021146 Phage gp6-like head-tail connector protein PA257_5037 5e841f1f8e6e5b7dbb156dc6f240ef33 109 Gene3D G3DSA:1.10.3230.30 7 109 4.0E-11 T 12-10-2018 PA257_5037 5e841f1f8e6e5b7dbb156dc6f240ef33 109 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 12 102 1.0E-9 T 12-10-2018 IPR006450 Phage protein of unkonwn function PA257_1436 7364f97dba7cf029c1c6f7f1e3083da2 154 Pfam PF01402 Ribbon-helix-helix protein, copG family 10 41 2.4E-4 T 12-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PA257_1436 7364f97dba7cf029c1c6f7f1e3083da2 154 SUPERFAMILY SSF47598 4 42 3.06E-6 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PA257_2875 2c88cfc8be563b4d29fcca2a2013f2aa 575 SUPERFAMILY SSF52540 177 573 1.67E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2875 2c88cfc8be563b4d29fcca2a2013f2aa 575 SUPERFAMILY SSF160246 15 157 3.92E-20 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily PA257_2875 2c88cfc8be563b4d29fcca2a2013f2aa 575 SMART SM00382 321 442 1.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2875 2c88cfc8be563b4d29fcca2a2013f2aa 575 Gene3D G3DSA:3.40.50.300 296 575 1.2E-107 T 12-10-2018 PA257_2875 2c88cfc8be563b4d29fcca2a2013f2aa 575 Pfam PF00437 Type II/IV secretion system protein 195 460 5.7E-81 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_2875 2c88cfc8be563b4d29fcca2a2013f2aa 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 52 158 1.9E-11 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal PA257_2875 2c88cfc8be563b4d29fcca2a2013f2aa 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 388 402 - T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_2875 2c88cfc8be563b4d29fcca2a2013f2aa 575 Gene3D G3DSA:3.30.450.90 163 292 6.1E-46 T 12-10-2018 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 Pfam PF05199 GMC oxidoreductase 395 529 6.3E-42 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 556 64.807 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 Gene3D G3DSA:3.30.410.40 154 476 2.5E-176 T 12-10-2018 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 SUPERFAMILY SSF51905 1 537 2.27E-88 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 539 2.6E-280 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 Gene3D G3DSA:1.10.1220.110 99 153 2.5E-176 T 12-10-2018 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 Pfam PF00732 GMC oxidoreductase 5 302 1.1E-95 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 SUPERFAMILY SSF54373 297 479 3.24E-64 T 12-10-2018 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 Gene3D G3DSA:3.50.50.60 4 533 2.5E-176 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 PIRSF PIRSF000137 1 541 2.8E-136 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 Gene3D G3DSA:4.10.450.10 38 201 2.5E-176 T 12-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 PA257_6766 9b6aca8c7d1dc3fb5b188e97c4ff34d2 561 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_0363 7784db45bb1394634388d92bef2cd011 250 Gene3D G3DSA:3.40.50.880 2 250 2.5E-68 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_0363 7784db45bb1394634388d92bef2cd011 250 Pfam PF07722 Peptidase C26 5 223 6.6E-77 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 PA257_0363 7784db45bb1394634388d92bef2cd011 250 SUPERFAMILY SSF52317 4 246 1.92E-39 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_5512 168c6f9672fb54e4afab585d153626b3 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 251 7.6E-62 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PA257_5512 168c6f9672fb54e4afab585d153626b3 252 Gene3D G3DSA:3.40.1390.30 99 223 2.0E-81 T 12-10-2018 PA257_5512 168c6f9672fb54e4afab585d153626b3 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 12 240 1.2E-57 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PA257_5512 168c6f9672fb54e4afab585d153626b3 252 Gene3D G3DSA:3.40.1390.30 16 237 2.0E-81 T 12-10-2018 PA257_5512 168c6f9672fb54e4afab585d153626b3 252 SUPERFAMILY SSF102705 5 251 4.19E-79 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily PA257_1706 2a4404b3476d6b758615ab8b9c7cfbe0 212 SUPERFAMILY SSF46689 1 65 7.98E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1706 2a4404b3476d6b758615ab8b9c7cfbe0 212 Gene3D G3DSA:1.10.357.10 1 212 4.1E-97 T 12-10-2018 PA257_1706 2a4404b3476d6b758615ab8b9c7cfbe0 212 SUPERFAMILY SSF48498 83 202 7.56E-12 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_1706 2a4404b3476d6b758615ab8b9c7cfbe0 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 9.1E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1706 2a4404b3476d6b758615ab8b9c7cfbe0 212 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 83 198 4.1E-13 T 12-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 PA257_1706 2a4404b3476d6b758615ab8b9c7cfbe0 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_1706 2a4404b3476d6b758615ab8b9c7cfbe0 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.8E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1706 2a4404b3476d6b758615ab8b9c7cfbe0 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.8E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_6345 a16ca15dcd72cff649a2985e172610e0 447 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 447 3.5E-210 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PA257_6345 a16ca15dcd72cff649a2985e172610e0 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 137 2.1E-7 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_6345 a16ca15dcd72cff649a2985e172610e0 447 SUPERFAMILY SSF52540 3 445 2.83E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6345 a16ca15dcd72cff649a2985e172610e0 447 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 447 42.096 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PA257_6345 a16ca15dcd72cff649a2985e172610e0 447 SMART SM00382 48 332 2.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6345 a16ca15dcd72cff649a2985e172610e0 447 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 8.1E-40 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_6345 a16ca15dcd72cff649a2985e172610e0 447 SMART SM01086 335 433 3.6E-15 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_6345 a16ca15dcd72cff649a2985e172610e0 447 Gene3D G3DSA:1.10.8.60 335 444 2.3E-35 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 ProSitePatterns PS01229 Hypothetical cof family signature 2. 685 707 - T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 Gene3D G3DSA:3.30.70.100 75 140 8.2E-23 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 Gene3D G3DSA:3.30.70.100 9 72 3.1E-20 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 Gene3D G3DSA:3.40.50.1000 467 737 3.4E-86 T 12-10-2018 IPR023214 HAD superfamily PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 Pfam PF00702 haloacid dehalogenase-like hydrolase 484 699 5.8E-42 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 SUPERFAMILY SSF56784 485 785 1.43E-59 T 12-10-2018 IPR036412 HAD-like superfamily PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 SUPERFAMILY SSF55008 6 71 4.71E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00943 Copper-transporting ATPase signature 469 484 4.8E-13 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00943 Copper-transporting ATPase signature 276 294 4.8E-13 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00943 Copper-transporting ATPase signature 409 423 4.8E-13 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00943 Copper-transporting ATPase signature 206 225 4.8E-13 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00943 Copper-transporting ATPase signature 662 679 4.8E-13 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00943 Copper-transporting ATPase signature 89 103 4.8E-13 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00943 Copper-transporting ATPase signature 256 275 4.8E-13 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 486 500 6.9E-23 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 720 6.9E-23 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 685 704 6.9E-23 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 336 350 6.9E-23 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 642 6.9E-23 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 Gene3D G3DSA:2.70.150.20 280 391 5.0E-38 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 SUPERFAMILY SSF81653 289 386 3.27E-26 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 Pfam PF00122 E1-E2 ATPase 287 466 5.0E-56 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 Gene3D G3DSA:3.40.1110.10 497 617 3.4E-86 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 SUPERFAMILY SSF55008 75 145 3.27E-20 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 ProSitePatterns PS01047 Heavy-metal-associated domain. 13 42 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 202 788 3.8E-179 T 12-10-2018 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 259 765 7.6E-87 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 221 787 8.7E-192 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 10 70 6.3E-9 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 76 137 1.4E-10 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 488 494 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 Pfam PF00403 Heavy-metal-associated domain 77 136 3.3E-15 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 Pfam PF00403 Heavy-metal-associated domain 11 69 4.3E-16 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 ProSitePatterns PS01047 Heavy-metal-associated domain. 79 108 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PA257_1239 bc4ce32f50434eadcf75ef92e6e14b07 792 SUPERFAMILY SSF81665 257 762 1.05E-15 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PA257_2373 6b76023a82d4fdbaeefccbf9196d7ac2 193 Pfam PF01292 Prokaryotic cytochrome b561 7 188 2.9E-25 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PA257_2373 6b76023a82d4fdbaeefccbf9196d7ac2 193 SUPERFAMILY SSF81342 5 190 4.63E-22 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PA257_5531 a845a9808bd6253b683a15ea92535c19 102 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.2E-36 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 PA257_5531 a845a9808bd6253b683a15ea92535c19 102 Gene3D G3DSA:3.30.160.100 1 101 6.1E-37 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like PA257_5531 a845a9808bd6253b683a15ea92535c19 102 SUPERFAMILY SSF69754 1 95 2.09E-35 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like PA257_5531 a845a9808bd6253b683a15ea92535c19 102 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.1E-28 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 SUPERFAMILY SSF51735 5 229 9.3E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0061 T 12-10-2018 PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 PIRSF PIRSF000126 1 263 1.1E-72 T 12-10-2018 PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 Gene3D G3DSA:3.40.50.720 7 265 7.5E-65 T 12-10-2018 PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 Pfam PF00106 short chain dehydrogenase 9 197 2.6E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6106 db51ac04843e70a65582b50a8412aa8a 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_4523 ea099b99bf498d9aa72eb15c8c7e2d01 312 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 312 108.25 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PA257_4523 ea099b99bf498d9aa72eb15c8c7e2d01 312 Pfam PF03186 CobD/Cbib protein 7 290 7.3E-96 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PA257_4523 ea099b99bf498d9aa72eb15c8c7e2d01 312 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 305 9.4E-58 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PA257_0612 a0cbb0f2edb36feb5a3c18f477b8569a 323 Gene3D G3DSA:2.60.120.1440 110 242 4.1E-21 T 12-10-2018 PA257_0612 a0cbb0f2edb36feb5a3c18f477b8569a 323 PIRSF PIRSF018266 5 323 1.5E-85 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_0612 a0cbb0f2edb36feb5a3c18f477b8569a 323 Pfam PF16220 Domain of unknown function (DUF4880) 16 55 2.7E-14 T 12-10-2018 IPR032623 FecR, N-terminal PA257_0612 a0cbb0f2edb36feb5a3c18f477b8569a 323 Pfam PF04773 FecR protein 122 209 2.7E-17 T 12-10-2018 IPR006860 FecR protein PA257_4867 41c5d0e24ee9ae85e47a7c5ace7aa5af 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 144 7.2E-30 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 PA257_4867 41c5d0e24ee9ae85e47a7c5ace7aa5af 146 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 4 144 31.485 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 PA257_4867 41c5d0e24ee9ae85e47a7c5ace7aa5af 146 Gene3D G3DSA:3.30.420.270 58 136 2.7E-16 T 12-10-2018 PA257_4867 41c5d0e24ee9ae85e47a7c5ace7aa5af 146 TIGRFAM TIGR02801 tolR: protein TolR 11 144 2.4E-46 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 PA257_0078 35892bb328e39488aebd106380509650 141 SUPERFAMILY SSF82784 2 139 1.44E-41 T 12-10-2018 IPR036102 OsmC/Ohr superfamily PA257_0078 35892bb328e39488aebd106380509650 141 Pfam PF02566 OsmC-like protein 43 135 5.5E-20 T 12-10-2018 IPR003718 OsmC/Ohr family PA257_0078 35892bb328e39488aebd106380509650 141 Gene3D G3DSA:3.30.300.20 1 140 8.0E-47 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_0078 35892bb328e39488aebd106380509650 141 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 2 137 3.1E-64 T 12-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 PA257_2495 b31b0365d98c5cd48a5616264d14906f 160 SUPERFAMILY SSF55781 19 153 4.17E-37 T 12-10-2018 PA257_2495 b31b0365d98c5cd48a5616264d14906f 160 Gene3D G3DSA:3.30.450.40 12 159 3.0E-59 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_2495 b31b0365d98c5cd48a5616264d14906f 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 97 114 - T 12-10-2018 IPR000614 Free Met sulfoxide reductase conserved site PA257_2495 b31b0365d98c5cd48a5616264d14906f 160 Pfam PF13185 GAF domain 42 151 2.8E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_0107 2054e9d6af77025190b52520a4534d65 261 SUPERFAMILY SSF144059 3 258 7.19E-92 T 12-10-2018 PA257_0107 2054e9d6af77025190b52520a4534d65 261 Gene3D G3DSA:1.25.40.10 1 86 1.1E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_0107 2054e9d6af77025190b52520a4534d65 261 Pfam PF07024 ImpE protein 139 254 1.4E-43 T 12-10-2018 IPR009211 Predicted virulence protein, SciE type PA257_0107 2054e9d6af77025190b52520a4534d65 261 PIRSF PIRSF029288 1 261 5.4E-103 T 12-10-2018 IPR009211 Predicted virulence protein, SciE type PA257_0602 e199959333667cfde0baf3135ab1c861 229 Gene3D G3DSA:1.10.10.10 134 228 2.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0602 e199959333667cfde0baf3135ab1c861 229 SMART SM00448 2 112 5.1E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0602 e199959333667cfde0baf3135ab1c861 229 SUPERFAMILY SSF52172 1 123 6.69E-37 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0602 e199959333667cfde0baf3135ab1c861 229 SUPERFAMILY SSF46894 133 224 4.54E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_0602 e199959333667cfde0baf3135ab1c861 229 Gene3D G3DSA:3.40.50.2300 1 121 5.5E-33 T 12-10-2018 PA257_0602 e199959333667cfde0baf3135ab1c861 229 SMART SM00862 148 224 4.4E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_0602 e199959333667cfde0baf3135ab1c861 229 Pfam PF00072 Response regulator receiver domain 4 112 3.8E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0602 e199959333667cfde0baf3135ab1c861 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 1.3E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_5931 04679f76afeb6b091f64fcb90c6a4d53 158 Gene3D G3DSA:3.30.1360.200 35 153 5.1E-20 T 12-10-2018 PA257_6481 325cae47eb68ebf2e11d0784b688f2ca 391 Pfam PF17482 Phage tail sheath C-terminal domain 276 377 1.1E-18 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain PA257_6481 325cae47eb68ebf2e11d0784b688f2ca 391 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 109 275 1.6E-36 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain PA257_3343 d9c9a98c18095af4415b55269139a09e 180 SUPERFAMILY SSF55826 35 176 1.44E-27 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_3343 d9c9a98c18095af4415b55269139a09e 180 Gene3D G3DSA:3.90.960.10 15 179 1.4E-26 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_3343 d9c9a98c18095af4415b55269139a09e 180 Pfam PF04073 Aminoacyl-tRNA editing domain 48 166 6.1E-21 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 SUPERFAMILY SSF51905 6 336 1.08E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.1E-63 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 1.1E-63 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 1.1E-63 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-63 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 1.1E-63 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 1.1E-63 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 1.1E-63 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 1.1E-63 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-63 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 Gene3D G3DSA:3.50.50.60 9 331 1.9E-113 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3397 f1d9b5d50e254751fff8410e40925295 464 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 464 1.7E-143 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 454 6.3E-30 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 8.1E-37 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 8.1E-37 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 8.1E-37 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 8.1E-37 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.1E-37 T 12-10-2018 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 Gene3D G3DSA:3.50.50.60 153 270 1.9E-113 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3397 f1d9b5d50e254751fff8410e40925295 464 PIRSF PIRSF000350 2 457 8.7E-79 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 1.2E-69 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 Gene3D G3DSA:3.30.390.30 344 464 1.1E-39 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_3397 f1d9b5d50e254751fff8410e40925295 464 SUPERFAMILY SSF55424 344 463 7.73E-33 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_5476 f889acbf6b86213a0f3d0ea2afcd3efd 287 Gene3D G3DSA:3.10.20.310 76 145 3.8E-20 T 12-10-2018 PA257_5476 f889acbf6b86213a0f3d0ea2afcd3efd 287 Gene3D G3DSA:3.40.50.11690 146 276 3.7E-42 T 12-10-2018 PA257_5476 f889acbf6b86213a0f3d0ea2afcd3efd 287 Pfam PF08478 POTRA domain, FtsQ-type 77 145 8.2E-18 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type PA257_5476 f889acbf6b86213a0f3d0ea2afcd3efd 287 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 46 270 25.096 T 12-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 PA257_5476 f889acbf6b86213a0f3d0ea2afcd3efd 287 Pfam PF03799 Cell division protein FtsQ 149 262 8.0E-23 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB PA257_3585 a0701254dc2c49035673307863770362 812 Gene3D G3DSA:3.40.50.2000 469 797 0.0 T 12-10-2018 PA257_3585 a0701254dc2c49035673307863770362 812 Gene3D G3DSA:3.40.50.2000 24 812 0.0 T 12-10-2018 PA257_3585 a0701254dc2c49035673307863770362 812 Pfam PF00343 Carbohydrate phosphorylase 100 812 3.3E-296 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 PA257_3585 a0701254dc2c49035673307863770362 812 PIRSF PIRSF000460 3 812 5.3E-216 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 PA257_3585 a0701254dc2c49035673307863770362 812 SUPERFAMILY SSF53756 11 811 6.99E-301 T 12-10-2018 PA257_3585 a0701254dc2c49035673307863770362 812 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 13 812 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 PA257_3585 a0701254dc2c49035673307863770362 812 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 PA257_4053 c1228d561139471d16c3afd23595760d 143 Gene3D G3DSA:1.10.10.1000 38 127 4.4E-10 T 12-10-2018 PA257_4053 c1228d561139471d16c3afd23595760d 143 Pfam PF09025 YopR, type III needle-polymerisation regulator 54 142 4.9E-22 T 12-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 PA257_4053 c1228d561139471d16c3afd23595760d 143 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 16 141 6.1E-48 T 12-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 PA257_4053 c1228d561139471d16c3afd23595760d 143 SUPERFAMILY SSF140591 24 123 8.63E-28 T 12-10-2018 PA257_0643 f90ef22e07147bbdc58551db84ce3bda 228 PIRSF PIRSF006755 1 226 5.2E-76 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 PA257_0643 f90ef22e07147bbdc58551db84ce3bda 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 218 28.925 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 PA257_0643 f90ef22e07147bbdc58551db84ce3bda 228 Gene3D G3DSA:3.40.50.300 3 222 8.8E-66 T 12-10-2018 PA257_0643 f90ef22e07147bbdc58551db84ce3bda 228 SUPERFAMILY SSF52540 1 214 5.31E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0643 f90ef22e07147bbdc58551db84ce3bda 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 176 2.1E-44 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 PA257_0643 f90ef22e07147bbdc58551db84ce3bda 228 Pfam PF13500 AAA domain 3 211 6.0E-35 T 12-10-2018 PA257_2648 493ce96e79c6d2c59091cf41b4f4ba72 106 Pfam PF11747 Killing trait 11 78 1.3E-28 T 12-10-2018 IPR021070 Killing trait, RebB PA257_0738 2f92f35296d9c4fc1df9d0feb1dd0e51 110 Pfam PF00581 Rhodanese-like domain 10 97 2.5E-16 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_0738 2f92f35296d9c4fc1df9d0feb1dd0e51 110 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 3 105 30.086 T 12-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 PA257_0738 2f92f35296d9c4fc1df9d0feb1dd0e51 110 SMART SM00450 8 102 2.5E-20 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_0738 2f92f35296d9c4fc1df9d0feb1dd0e51 110 Gene3D G3DSA:3.40.250.10 2 107 3.0E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_0738 2f92f35296d9c4fc1df9d0feb1dd0e51 110 SUPERFAMILY SSF52821 3 101 5.37E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_1764 3609310dd6bca434afd108c2233c23fe 64 SUPERFAMILY SSF55008 2 61 1.57E-13 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_1764 3609310dd6bca434afd108c2233c23fe 64 Gene3D G3DSA:3.30.70.100 2 62 4.1E-16 T 12-10-2018 PA257_1764 3609310dd6bca434afd108c2233c23fe 64 Pfam PF00403 Heavy-metal-associated domain 4 60 3.5E-9 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_4210 a08d8d99a1a0c71a780c75428c6a9de1 93 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 25.887 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 PA257_4210 a08d8d99a1a0c71a780c75428c6a9de1 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 4.0E-37 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 PA257_4210 a08d8d99a1a0c71a780c75428c6a9de1 93 SUPERFAMILY SSF51182 1 92 2.14E-36 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4210 a08d8d99a1a0c71a780c75428c6a9de1 93 Gene3D G3DSA:2.60.120.10 1 93 7.3E-36 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1143 558c5373429fca6b63ce8bf23ddb3113 231 Gene3D G3DSA:3.10.300.10 4 207 4.1E-38 T 12-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PA257_1143 558c5373429fca6b63ce8bf23ddb3113 231 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 11 205 25.841 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PA257_1143 558c5373429fca6b63ce8bf23ddb3113 231 SUPERFAMILY SSF50486 7 212 3.06E-53 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 PA257_1143 558c5373429fca6b63ce8bf23ddb3113 231 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 13 197 7.7E-36 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PA257_3112 9a1c4f53597d411251ea4c4de9e56fbe 565 Pfam PF17287 POTRA domain 161 203 4.2E-15 T 12-10-2018 IPR035251 ShlB, POTRA domain PA257_3112 9a1c4f53597d411251ea4c4de9e56fbe 565 Gene3D G3DSA:3.10.20.310 61 149 7.3E-18 T 12-10-2018 PA257_3112 9a1c4f53597d411251ea4c4de9e56fbe 565 Gene3D G3DSA:2.40.160.50 181 565 1.7E-86 T 12-10-2018 PA257_3112 9a1c4f53597d411251ea4c4de9e56fbe 565 PIRSF PIRSF029745 1 565 2.0E-152 T 12-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 PA257_3112 9a1c4f53597d411251ea4c4de9e56fbe 565 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 208 528 2.1E-97 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal PA257_3112 9a1c4f53597d411251ea4c4de9e56fbe 565 Pfam PF08479 POTRA domain, ShlB-type 74 149 5.1E-27 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type PA257_5547 301d59a6aca6860fae0e2438b38218e6 164 PIRSF PIRSF018472 2 164 7.6E-55 T 12-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type PA257_5547 301d59a6aca6860fae0e2438b38218e6 164 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 1.5E-36 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PA257_5547 301d59a6aca6860fae0e2438b38218e6 164 Pfam PF04093 rod shape-determining protein MreD 8 156 4.4E-40 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PA257_5259 182609aea4308b306bf259527d0943ca 91 Pfam PF00403 Heavy-metal-associated domain 25 85 2.6E-16 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_5259 182609aea4308b306bf259527d0943ca 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 3.3E-59 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_5259 182609aea4308b306bf259527d0943ca 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 3.3E-59 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_5259 182609aea4308b306bf259527d0943ca 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 3.3E-59 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_5259 182609aea4308b306bf259527d0943ca 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 3.3E-59 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_5259 182609aea4308b306bf259527d0943ca 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 3.3E-59 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_5259 182609aea4308b306bf259527d0943ca 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 3.3E-59 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_5259 182609aea4308b306bf259527d0943ca 91 SUPERFAMILY SSF55008 17 89 4.71E-22 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_5259 182609aea4308b306bf259527d0943ca 91 Gene3D G3DSA:3.30.70.100 20 91 1.9E-23 T 12-10-2018 PA257_5259 182609aea4308b306bf259527d0943ca 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PA257_5259 182609aea4308b306bf259527d0943ca 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 91 2.8E-44 T 12-10-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 SUPERFAMILY SSF118215 17 398 4.32E-95 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 Pfam PF00375 Sodium:dicarboxylate symporter family 17 396 9.3E-62 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.604 T 12-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 Gene3D G3DSA:1.10.3860.10 8 405 1.5E-69 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 7.5E-18 T 12-10-2018 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 43 68 7.5E-18 T 12-10-2018 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 7.5E-18 T 12-10-2018 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 7.5E-18 T 12-10-2018 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 7.5E-18 T 12-10-2018 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 7.5E-18 T 12-10-2018 PA257_3693 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 7.5E-18 T 12-10-2018 PA257_2877 e9a387fa6df03cc8c6bd7702d31538ad 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 3.1E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2877 e9a387fa6df03cc8c6bd7702d31538ad 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.5E-11 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PA257_2877 e9a387fa6df03cc8c6bd7702d31538ad 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 1.5E-11 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PA257_2877 e9a387fa6df03cc8c6bd7702d31538ad 144 Gene3D G3DSA:3.30.700.10 32 140 5.7E-29 T 12-10-2018 PA257_2877 e9a387fa6df03cc8c6bd7702d31538ad 144 Pfam PF08334 Type II secretion system (T2SS), protein G 31 139 4.5E-33 T 12-10-2018 IPR013545 Type II secretion system protein G PA257_2877 e9a387fa6df03cc8c6bd7702d31538ad 144 SUPERFAMILY SSF54523 35 140 2.3E-26 T 12-10-2018 PA257_2877 e9a387fa6df03cc8c6bd7702d31538ad 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 141 8.5E-58 T 12-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 PA257_2877 e9a387fa6df03cc8c6bd7702d31538ad 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2877 e9a387fa6df03cc8c6bd7702d31538ad 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 2.7E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_3224 6d480d7a3542569e4ba687d733f57921 545 Pfam PF01204 Trehalase 64 540 5.8E-171 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 ProSitePatterns PS00927 Trehalase signature 1. 157 170 - T 12-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 SUPERFAMILY SSF48208 49 542 1.4E-160 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 Gene3D G3DSA:1.50.10.10 47 543 3.6E-175 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 199 217 6.2E-41 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 274 291 6.2E-41 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 523 536 6.2E-41 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 446 462 6.2E-41 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 340 357 6.2E-41 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 308 325 6.2E-41 T 12-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 ProSitePatterns PS00928 Trehalase signature 2. 453 462 - T 12-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 PA257_3224 6d480d7a3542569e4ba687d733f57921 545 Hamap MF_01060 Periplasmic trehalase [treA]. 2 541 85.855 T 12-10-2018 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 PA257_1145 8491e47c4ab8469242f3f4088a993253 407 Pfam PF00561 alpha/beta hydrolase fold 40 270 4.0E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_1145 8491e47c4ab8469242f3f4088a993253 407 SUPERFAMILY SSF53474 20 283 7.9E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1145 8491e47c4ab8469242f3f4088a993253 407 Gene3D G3DSA:3.40.50.1820 17 284 9.0E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1720 354966ed926ae59890dffec8e4535ed6 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 685 704 9.5E-19 T 12-10-2018 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 850 865 9.5E-19 T 12-10-2018 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 833 848 9.5E-19 T 12-10-2018 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 886 898 9.5E-19 T 12-10-2018 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain PA257_1720 354966ed926ae59890dffec8e4535ed6 956 SUPERFAMILY SSF51621 646 926 2.66E-99 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 SUPERFAMILY SSF47831 430 537 2.09E-23 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Gene3D G3DSA:1.10.274.10 422 540 4.1E-57 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Gene3D G3DSA:3.20.20.60 626 956 3.1E-115 T 12-10-2018 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 SUPERFAMILY SSF55594 285 372 4.97E-18 T 12-10-2018 IPR035895 HPr-like superfamily PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Pfam PF00381 PTS HPr component phosphorylation site 285 365 1.4E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_1720 354966ed926ae59890dffec8e4535ed6 956 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 406 952 3.9E-143 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 833 851 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 285 364 9.4E-14 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Gene3D G3DSA:3.30.1340.10 284 371 1.4E-18 T 12-10-2018 IPR035895 HPr-like superfamily PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 646 927 1.5E-102 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 PRINTS PR00107 Phosphocarrier protein signature 337 354 6.4E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_1720 354966ed926ae59890dffec8e4535ed6 956 PRINTS PR00107 Phosphocarrier protein signature 294 310 6.4E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_1720 354966ed926ae59890dffec8e4535ed6 956 PRINTS PR00107 Phosphocarrier protein signature 322 337 6.4E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Pfam PF00391 PEP-utilising enzyme, mobile domain 545 617 8.4E-22 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Gene3D G3DSA:3.50.30.10 406 625 4.1E-57 T 12-10-2018 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Gene3D G3DSA:3.40.930.10 1 142 5.4E-34 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Pfam PF05524 PEP-utilising enzyme, N-terminal 405 520 1.0E-20 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 148 274 2.8E-5 T 12-10-2018 IPR002178 PTS EIIA type-2 domain PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 2.5E-26 T 12-10-2018 IPR002178 PTS EIIA type-2 domain PA257_1720 354966ed926ae59890dffec8e4535ed6 956 SUPERFAMILY SSF55804 4 141 7.59E-35 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 Gene3D G3DSA:3.40.930.10 145 275 1.5E-6 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 576 587 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 SUPERFAMILY SSF55804 148 274 8.89E-17 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PA257_1720 354966ed926ae59890dffec8e4535ed6 956 SUPERFAMILY SSF52009 519 634 5.1E-31 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 PA257_3012 776c5ef502d683435263da99059928e2 361 SMART SM00342 255 338 4.9E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3012 776c5ef502d683435263da99059928e2 361 SUPERFAMILY SSF46689 291 341 1.08E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3012 776c5ef502d683435263da99059928e2 361 Pfam PF12833 Helix-turn-helix domain 262 339 5.0E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3012 776c5ef502d683435263da99059928e2 361 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 212 4.9E-45 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_3012 776c5ef502d683435263da99059928e2 361 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 3.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_3012 776c5ef502d683435263da99059928e2 361 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 3.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_3012 776c5ef502d683435263da99059928e2 361 Gene3D G3DSA:1.10.10.60 237 351 1.6E-19 T 12-10-2018 PA257_2857 2a0a527696c2ec8817989b3be5885bb2 166 Pfam PF03061 Thioesterase superfamily 23 95 1.8E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_2857 2a0a527696c2ec8817989b3be5885bb2 166 SUPERFAMILY SSF54637 5 156 9.1E-45 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_2857 2a0a527696c2ec8817989b3be5885bb2 166 Gene3D G3DSA:3.10.129.10 2 151 1.0E-56 T 12-10-2018 PA257_2238 662a82a0e61a9586c34ba315347a3814 455 SUPERFAMILY SSF55781 181 313 1.92E-8 T 12-10-2018 PA257_2238 662a82a0e61a9586c34ba315347a3814 455 Pfam PF13492 GAF domain 181 304 3.0E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 PA257_2238 662a82a0e61a9586c34ba315347a3814 455 Gene3D G3DSA:3.30.70.2880 319 455 7.2E-72 T 12-10-2018 IPR038367 PelD, GGDEF domain superfamily PA257_2238 662a82a0e61a9586c34ba315347a3814 455 Gene3D G3DSA:3.30.450.40 155 318 3.5E-53 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_2238 662a82a0e61a9586c34ba315347a3814 455 Pfam PF16963 PelD GGDEF domain 321 444 3.6E-35 T 12-10-2018 IPR031583 PelD, GGDEF domain PA257_2297 926d1f4405dc0193cea5c601961b432d 233 Gene3D G3DSA:1.10.357.10 1 214 5.2E-94 T 12-10-2018 PA257_2297 926d1f4405dc0193cea5c601961b432d 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 2.1E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2297 926d1f4405dc0193cea5c601961b432d 233 SUPERFAMILY SSF48498 82 209 2.0E-39 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_2297 926d1f4405dc0193cea5c601961b432d 233 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_2297 926d1f4405dc0193cea5c601961b432d 233 SUPERFAMILY SSF46689 4 74 3.28E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2297 926d1f4405dc0193cea5c601961b432d 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2297 926d1f4405dc0193cea5c601961b432d 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2508 8cca49e113718b62e6ec8a6885ca3f2b 506 Pfam PF07916 TraG-like protein, N-terminal region 10 485 2.3E-93 T 12-10-2018 IPR012931 TraG-like, N-terminal PA257_1974 a28f0a9091a112be0eba7804a9e7aa22 664 Pfam PF04632 Fusaric acid resistance protein family 16 657 4.5E-197 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 PA257_3824 11f490315dedbddfdb3c8e9e3ec56b83 48 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 11 44 2.9E-9 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PA257_0924 34b030d04c8897d8a2c2930ffa6c3e3a 142 Gene3D G3DSA:1.10.10.10 2 140 1.5E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0924 34b030d04c8897d8a2c2930ffa6c3e3a 142 Pfam PF02082 Transcriptional regulator 1 81 3.4E-24 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type PA257_0924 34b030d04c8897d8a2c2930ffa6c3e3a 142 SUPERFAMILY SSF46785 5 131 4.49E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1254 c74f685a17cd2098ce3a4ef76ab7ff6a 780 Gene3D G3DSA:3.60.10.10 455 768 1.3E-34 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_1254 c74f685a17cd2098ce3a4ef76ab7ff6a 780 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 458 761 7.0E-9 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PA257_1254 c74f685a17cd2098ce3a4ef76ab7ff6a 780 SUPERFAMILY SSF56219 453 769 2.59E-36 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_1254 c74f685a17cd2098ce3a4ef76ab7ff6a 780 Pfam PF00932 Lamin Tail Domain 20 129 9.3E-16 T 12-10-2018 IPR001322 Lamin tail domain PA257_2236 3bb803439fecad17b84675b316ab8b80 1193 Pfam PF13429 Tetratricopeptide repeat 448 727 3.3E-92 T 12-10-2018 PA257_2236 3bb803439fecad17b84675b316ab8b80 1193 SUPERFAMILY SSF48452 593 728 3.13E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2236 3bb803439fecad17b84675b316ab8b80 1193 Gene3D G3DSA:1.25.40.10 531 843 5.9E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2236 3bb803439fecad17b84675b316ab8b80 1193 Gene3D G3DSA:1.25.40.10 362 523 3.2E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2236 3bb803439fecad17b84675b316ab8b80 1193 Gene3D G3DSA:1.25.40.10 223 351 2.7E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2236 3bb803439fecad17b84675b316ab8b80 1193 SUPERFAMILY SSF48452 56 345 5.58E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 Gene3D G3DSA:3.30.565.10 285 426 1.1E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 SUPERFAMILY SSF55874 287 423 6.29E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 SMART SM00304 156 210 5.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 SMART SM00387 321 426 3.7E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.0E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 SUPERFAMILY SSF47384 194 277 1.82E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 Gene3D G3DSA:1.10.287.130 160 278 3.0E-21 T 12-10-2018 PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 424 3.9E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 SMART SM00388 211 277 6.7E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5445 6c32b9043b2e1e4c1a075890708d68fe 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 276 1.2E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4976 d07aa676f487e0816ac013c933847283 118 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 111 22.135 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 PA257_4976 d07aa676f487e0816ac013c933847283 118 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 19 110 8.5E-29 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 PA257_4976 d07aa676f487e0816ac013c933847283 118 Gene3D G3DSA:3.30.1360.20 18 117 1.2E-30 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 PA257_4976 d07aa676f487e0816ac013c933847283 118 SUPERFAMILY SSF55248 16 112 1.7E-33 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 PA257_0566 b90c5e5b68292f03f2b09e617f057bc4 282 Gene3D G3DSA:3.20.20.220 1 282 2.3E-100 T 12-10-2018 PA257_0566 b90c5e5b68292f03f2b09e617f057bc4 282 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 8 279 1.6E-100 T 12-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 PA257_0566 b90c5e5b68292f03f2b09e617f057bc4 282 SUPERFAMILY SSF51730 3 280 3.14E-95 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like PA257_0566 b90c5e5b68292f03f2b09e617f057bc4 282 Pfam PF02219 Methylenetetrahydrofolate reductase 4 278 3.4E-88 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PA257_2370 fb2fe05223b82235c6eaaa5856894ab0 536 Gene3D G3DSA:3.40.630.10 85 483 4.4E-79 T 12-10-2018 PA257_2370 fb2fe05223b82235c6eaaa5856894ab0 536 Gene3D G3DSA:3.50.30.30 126 267 4.4E-79 T 12-10-2018 PA257_2370 fb2fe05223b82235c6eaaa5856894ab0 536 Pfam PF02225 PA domain 155 253 3.8E-17 T 12-10-2018 IPR003137 PA domain PA257_2370 fb2fe05223b82235c6eaaa5856894ab0 536 SUPERFAMILY SSF53187 70 495 1.0E-62 T 12-10-2018 PA257_2370 fb2fe05223b82235c6eaaa5856894ab0 536 SUPERFAMILY SSF52025 117 239 3.79E-15 T 12-10-2018 PA257_2370 fb2fe05223b82235c6eaaa5856894ab0 536 Pfam PF04389 Peptidase family M28 277 489 9.3E-46 T 12-10-2018 IPR007484 Peptidase M28 PA257_1625 a0ad0bf51a088323986a73e96835006d 465 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 2 444 4.3E-66 T 12-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 PA257_1625 a0ad0bf51a088323986a73e96835006d 465 Pfam PF05136 Phage portal protein, lambda family 2 341 1.8E-96 T 12-10-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 PA257_4209 1c92e8765b7a3784f0b7712d1201fcf1 183 SUPERFAMILY SSF53098 2 178 7.06E-31 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_4209 1c92e8765b7a3784f0b7712d1201fcf1 183 Pfam PF00929 Exonuclease 5 175 2.1E-18 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_4209 1c92e8765b7a3784f0b7712d1201fcf1 183 SMART SM00479 3 183 1.8E-7 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_4209 1c92e8765b7a3784f0b7712d1201fcf1 183 Gene3D G3DSA:3.30.420.10 1 181 1.9E-47 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_5349 510a95816411ad63dfb1cc8916ff452b 267 Pfam PF12833 Helix-turn-helix domain 180 256 8.6E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5349 510a95816411ad63dfb1cc8916ff452b 267 Gene3D G3DSA:1.10.10.60 158 263 7.9E-24 T 12-10-2018 PA257_5349 510a95816411ad63dfb1cc8916ff452b 267 SUPERFAMILY SSF46689 211 256 1.43E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5349 510a95816411ad63dfb1cc8916ff452b 267 Gene3D G3DSA:2.60.120.10 2 95 4.2E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_5349 510a95816411ad63dfb1cc8916ff452b 267 SMART SM00342 174 256 3.6E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5349 510a95816411ad63dfb1cc8916ff452b 267 SUPERFAMILY SSF51182 16 183 1.1E-14 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_5349 510a95816411ad63dfb1cc8916ff452b 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_5349 510a95816411ad63dfb1cc8916ff452b 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_5349 510a95816411ad63dfb1cc8916ff452b 267 Pfam PF02311 AraC-like ligand binding domain 21 98 1.3E-10 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_5513 63ccb1845528db280eef180a0726c05a 389 Gene3D G3DSA:2.40.10.120 53 274 3.8E-77 T 12-10-2018 PA257_5513 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 137 157 5.6E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5513 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 320 332 5.6E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5513 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 5.6E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5513 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 116 128 5.6E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5513 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 5.6E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5513 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 5.6E-54 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PA257_5513 63ccb1845528db280eef180a0726c05a 389 SUPERFAMILY SSF50156 238 363 1.71E-22 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 PA257_5513 63ccb1845528db280eef180a0726c05a 389 Pfam PF13365 Trypsin-like peptidase domain 107 241 1.9E-30 T 12-10-2018 PA257_5513 63ccb1845528db280eef180a0726c05a 389 SUPERFAMILY SSF50494 51 272 6.4E-63 T 12-10-2018 IPR009003 Peptidase S1, PA clan PA257_5513 63ccb1845528db280eef180a0726c05a 389 Pfam PF13180 PDZ domain 280 370 2.4E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_5513 63ccb1845528db280eef180a0726c05a 389 Gene3D G3DSA:2.30.42.10 275 374 1.6E-24 T 12-10-2018 PA257_5513 63ccb1845528db280eef180a0726c05a 389 SMART SM00228 280 362 1.3E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 PA257_3119 e4458e02dbad783c66befef34867698f 175 Pfam PF00583 Acetyltransferase (GNAT) family 47 150 3.2E-11 T 12-10-2018 IPR000182 GNAT domain PA257_3119 e4458e02dbad783c66befef34867698f 175 Gene3D G3DSA:3.40.630.30 2 167 7.3E-14 T 12-10-2018 PA257_3119 e4458e02dbad783c66befef34867698f 175 SUPERFAMILY SSF55729 5 161 1.18E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_0007 ed3e296a1f3d03e550a17e664a9f306b 124 Gene3D G3DSA:3.30.420.10 1 85 5.2E-14 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_0007 ed3e296a1f3d03e550a17e664a9f306b 124 Pfam PF13683 Integrase core domain 32 97 1.8E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_0007 ed3e296a1f3d03e550a17e664a9f306b 124 SUPERFAMILY SSF53098 3 106 7.33E-28 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_4306 bbef9ee2656a5234b46fe7c845020200 471 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 342 362 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PA257_4306 bbef9ee2656a5234b46fe7c845020200 471 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 215 8.6E-49 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PA257_4306 bbef9ee2656a5234b46fe7c845020200 471 Gene3D G3DSA:3.30.420.40 234 471 3.9E-55 T 12-10-2018 PA257_4306 bbef9ee2656a5234b46fe7c845020200 471 PIRSF PIRSF000538 1 471 2.4E-101 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PA257_4306 bbef9ee2656a5234b46fe7c845020200 471 SUPERFAMILY SSF53067 234 470 5.72E-46 T 12-10-2018 PA257_4306 bbef9ee2656a5234b46fe7c845020200 471 Gene3D G3DSA:3.30.420.40 2 233 6.3E-72 T 12-10-2018 PA257_4306 bbef9ee2656a5234b46fe7c845020200 471 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 241 428 1.3E-30 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PA257_4306 bbef9ee2656a5234b46fe7c845020200 471 SUPERFAMILY SSF53067 3 235 2.2E-66 T 12-10-2018 PA257_0911 33e3cec0e7db9a0088a2927bad5e2950 239 SMART SM00873 64 216 1.5E-15 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PA257_0911 33e3cec0e7db9a0088a2927bad5e2950 239 SUPERFAMILY SSF56037 54 213 9.42E-27 T 12-10-2018 PA257_0911 33e3cec0e7db9a0088a2927bad5e2950 239 Pfam PF03483 B3/4 domain 66 195 2.2E-16 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 9.3E-32 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 7.8E-159 T 12-10-2018 IPR020823 Cell division protein FtsA PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.90.640.10 235 300 5.3E-128 T 12-10-2018 PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 Pfam PF14450 Cell division protein FtsA 11 193 2.6E-11 T 12-10-2018 PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.420.40 197 352 5.3E-128 T 12-10-2018 PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.420.40 13 371 5.3E-128 T 12-10-2018 PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 SUPERFAMILY SSF53067 198 378 6.68E-52 T 12-10-2018 PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 SUPERFAMILY SSF53067 9 197 4.12E-63 T 12-10-2018 PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 PIRSF PIRSF003101 1 417 1.6E-161 T 12-10-2018 IPR020823 Cell division protein FtsA PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.1490.110 87 169 5.3E-128 T 12-10-2018 PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 417 31.729 T 12-10-2018 IPR020823 Cell division protein FtsA PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 SMART SM00842 10 196 7.4E-107 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 PA257_5475 48e70e2a11407bbdc893c9d471f716c4 417 Pfam PF14450 Cell division protein FtsA 207 374 4.0E-26 T 12-10-2018 PA257_2990 e9658260ba44c408c492ca4d95457267 535 SUPERFAMILY SSF58104 226 535 1.83E-76 T 12-10-2018 PA257_2990 e9658260ba44c408c492ca4d95457267 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 500 2.8E-47 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2990 e9658260ba44c408c492ca4d95457267 535 Pfam PF00672 HAMP domain 206 255 2.0E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2990 e9658260ba44c408c492ca4d95457267 535 SMART SM00304 206 258 1.1E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2990 e9658260ba44c408c492ca4d95457267 535 SMART SM00283 273 534 4.4E-80 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2990 e9658260ba44c408c492ca4d95457267 535 Gene3D G3DSA:1.10.287.950 206 535 1.5E-77 T 12-10-2018 PA257_0455 ebbf9239c6157df9529a9cfa710c427c 125 Pfam PF04241 Protein of unknown function (DUF423) 19 105 1.1E-29 T 12-10-2018 IPR006696 Protein of unknown function DUF423 PA257_6392 2747effb4ec3ea652cbd4793fa7c8774 265 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 55 245 1.4E-15 T 12-10-2018 PA257_6392 2747effb4ec3ea652cbd4793fa7c8774 265 Gene3D G3DSA:3.40.190.10 90 197 1.0E-11 T 12-10-2018 PA257_6392 2747effb4ec3ea652cbd4793fa7c8774 265 Gene3D G3DSA:3.40.190.10 198 219 1.0E-11 T 12-10-2018 PA257_6392 2747effb4ec3ea652cbd4793fa7c8774 265 SUPERFAMILY SSF53850 55 221 3.71E-8 T 12-10-2018 PA257_4760 610dbfdec07b8516229272e847cab2ab 365 Gene3D G3DSA:3.40.50.1100 52 158 5.1E-67 T 12-10-2018 PA257_4760 610dbfdec07b8516229272e847cab2ab 365 SUPERFAMILY SSF53686 24 337 1.57E-67 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_4760 610dbfdec07b8516229272e847cab2ab 365 Gene3D G3DSA:3.40.50.1100 26 324 5.1E-67 T 12-10-2018 PA257_4760 610dbfdec07b8516229272e847cab2ab 365 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 317 5.0E-43 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_2290 ab144fd299270fed183a0709efe10f49 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.1E-47 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_2290 ab144fd299270fed183a0709efe10f49 391 SUPERFAMILY SSF53901 4 262 1.28E-78 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2290 ab144fd299270fed183a0709efe10f49 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PA257_2290 ab144fd299270fed183a0709efe10f49 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.022 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 PA257_2290 ab144fd299270fed183a0709efe10f49 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PA257_2290 ab144fd299270fed183a0709efe10f49 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 1.1E-231 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 PA257_2290 ab144fd299270fed183a0709efe10f49 391 SUPERFAMILY SSF53901 266 390 2.71E-42 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2290 ab144fd299270fed183a0709efe10f49 391 Gene3D G3DSA:3.40.47.10 8 271 9.8E-154 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2290 ab144fd299270fed183a0709efe10f49 391 Gene3D G3DSA:3.40.47.10 138 384 9.8E-154 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_2290 ab144fd299270fed183a0709efe10f49 391 PIRSF PIRSF000429 2 391 3.9E-132 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_2290 ab144fd299270fed183a0709efe10f49 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 1.6E-134 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_2290 ab144fd299270fed183a0709efe10f49 391 Pfam PF00108 Thiolase, N-terminal domain 8 257 2.0E-84 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_4262 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 1.4E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4262 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 SMART SM00345 13 71 5.4E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4262 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 Pfam PF07729 FCD domain 88 202 3.8E-10 T 12-10-2018 IPR011711 GntR, C-terminal PA257_4262 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 Gene3D G3DSA:1.10.10.10 3 72 3.7E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4262 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 SMART SM00895 81 207 0.0076 T 12-10-2018 IPR011711 GntR, C-terminal PA257_4262 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 Gene3D G3DSA:1.20.120.530 74 213 1.5E-11 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_4262 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 SUPERFAMILY SSF46785 5 75 2.57E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4262 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 SUPERFAMILY SSF48008 78 215 3.66E-9 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_6121 404b88c44a99180c38e9a7feba1bfc0d 591 Gene3D G3DSA:3.40.30.10 467 590 4.6E-24 T 12-10-2018 PA257_6121 404b88c44a99180c38e9a7feba1bfc0d 591 SUPERFAMILY SSF74863 35 151 1.31E-38 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily PA257_6121 404b88c44a99180c38e9a7feba1bfc0d 591 SUPERFAMILY SSF52833 474 585 8.93E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_6121 404b88c44a99180c38e9a7feba1bfc0d 591 Gene3D G3DSA:2.60.40.1250 32 158 2.5E-42 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily PA257_6121 404b88c44a99180c38e9a7feba1bfc0d 591 Pfam PF11412 Disulphide bond corrector protein DsbC 37 150 4.1E-35 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PA257_6121 404b88c44a99180c38e9a7feba1bfc0d 591 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 180 385 1.5E-11 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PA257_6121 404b88c44a99180c38e9a7feba1bfc0d 591 Pfam PF13899 Thioredoxin-like 479 561 4.0E-19 T 12-10-2018 PA257_6121 404b88c44a99180c38e9a7feba1bfc0d 591 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 588 37.724 T 12-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PA257_2969 b57aecd43f686305fa7694543cc20d3e 404 SUPERFAMILY SSF103473 17 402 2.22E-49 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_2969 b57aecd43f686305fa7694543cc20d3e 404 Gene3D G3DSA:1.20.1250.20 11 197 3.1E-22 T 12-10-2018 PA257_2969 b57aecd43f686305fa7694543cc20d3e 404 Gene3D G3DSA:1.20.1250.20 212 402 1.4E-19 T 12-10-2018 PA257_2969 b57aecd43f686305fa7694543cc20d3e 404 Pfam PF07690 Major Facilitator Superfamily 28 362 7.5E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_2754 dbd68c09163526d508fc467c901e21dd 427 Gene3D G3DSA:3.30.9.10 123 344 1.7E-72 T 12-10-2018 PA257_2754 dbd68c09163526d508fc467c901e21dd 427 Pfam PF01266 FAD dependent oxidoreductase 31 381 3.0E-54 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_2754 dbd68c09163526d508fc467c901e21dd 427 Gene3D G3DSA:3.50.50.60 31 382 1.7E-72 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2754 dbd68c09163526d508fc467c901e21dd 427 SUPERFAMILY SSF51905 30 413 6.04E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3414 d3667a70c8f319f75b610fd40749e229 303 SUPERFAMILY SSF53448 5 219 9.19E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_3414 d3667a70c8f319f75b610fd40749e229 303 Pfam PF13641 Glycosyltransferase like family 2 3 220 8.1E-14 T 12-10-2018 PA257_3414 d3667a70c8f319f75b610fd40749e229 303 Gene3D G3DSA:3.90.550.10 2 230 4.3E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_0386 7ecf07cddf9b19006018c4eefa038d4c 221 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 20 220 5.7E-54 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PA257_0386 7ecf07cddf9b19006018c4eefa038d4c 221 Gene3D G3DSA:3.90.850.10 1 221 2.1E-68 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_0386 7ecf07cddf9b19006018c4eefa038d4c 221 SUPERFAMILY SSF56529 12 220 1.26E-65 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_4563 ca38a320de6600e29c3710d9ba97ec8a 482 Gene3D G3DSA:1.20.1600.10 53 469 6.4E-98 T 12-10-2018 PA257_4563 ca38a320de6600e29c3710d9ba97ec8a 482 SUPERFAMILY SSF56954 6 471 2.88E-81 T 12-10-2018 PA257_4563 ca38a320de6600e29c3710d9ba97ec8a 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 44 468 1.2E-72 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_4563 ca38a320de6600e29c3710d9ba97ec8a 482 Gene3D G3DSA:2.20.200.10 100 357 6.4E-98 T 12-10-2018 PA257_4563 ca38a320de6600e29c3710d9ba97ec8a 482 Pfam PF02321 Outer membrane efflux protein 63 256 4.0E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_4563 ca38a320de6600e29c3710d9ba97ec8a 482 Pfam PF02321 Outer membrane efflux protein 288 466 3.8E-15 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_0855 6612f1505ad78f0c94ed2173877365bd 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 9.2E-56 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0855 6612f1505ad78f0c94ed2173877365bd 129 Gene3D G3DSA:3.30.420.80 1 129 5.1E-56 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 PA257_0855 6612f1505ad78f0c94ed2173877365bd 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site PA257_0855 6612f1505ad78f0c94ed2173877365bd 129 Pfam PF00411 Ribosomal protein S11 19 128 2.2E-51 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PA257_0855 6612f1505ad78f0c94ed2173877365bd 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.637 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PA257_0855 6612f1505ad78f0c94ed2173877365bd 129 SUPERFAMILY SSF53137 15 129 2.09E-47 T 12-10-2018 PA257_0855 6612f1505ad78f0c94ed2173877365bd 129 PIRSF PIRSF002131 1 129 1.2E-53 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PA257_3245 a3ed59061c4c95fd880c4bd831f9eb6d 284 Pfam PF03781 Sulfatase-modifying factor enzyme 1 37 282 1.7E-68 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 PA257_3245 a3ed59061c4c95fd880c4bd831f9eb6d 284 SUPERFAMILY SSF56436 36 283 3.06E-65 T 12-10-2018 IPR016187 C-type lectin fold PA257_3245 a3ed59061c4c95fd880c4bd831f9eb6d 284 Gene3D G3DSA:3.90.1580.10 25 284 6.9E-60 T 12-10-2018 PA257_6057 a2bebdf90d52a53be8fdd02a9ae53708 425 PIRSF PIRSF000429 1 425 1.8E-99 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_6057 a2bebdf90d52a53be8fdd02a9ae53708 425 Pfam PF00108 Thiolase, N-terminal domain 7 275 3.4E-46 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_6057 a2bebdf90d52a53be8fdd02a9ae53708 425 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 424 1.5E-112 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_6057 a2bebdf90d52a53be8fdd02a9ae53708 425 Pfam PF02803 Thiolase, C-terminal domain 302 425 1.0E-29 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_6057 a2bebdf90d52a53be8fdd02a9ae53708 425 SUPERFAMILY SSF53901 7 282 1.43E-54 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_6057 a2bebdf90d52a53be8fdd02a9ae53708 425 Gene3D G3DSA:3.40.47.10 1 425 2.6E-102 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_6057 a2bebdf90d52a53be8fdd02a9ae53708 425 SUPERFAMILY SSF53901 302 425 5.76E-28 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4671 01319efdfaef004f0486c0fae0d142d2 291 Pfam PF03466 LysR substrate binding domain 88 286 9.8E-36 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4671 01319efdfaef004f0486c0fae0d142d2 291 Gene3D G3DSA:3.40.190.290 90 286 2.4E-36 T 12-10-2018 PA257_4671 01319efdfaef004f0486c0fae0d142d2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4671 01319efdfaef004f0486c0fae0d142d2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4671 01319efdfaef004f0486c0fae0d142d2 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4671 01319efdfaef004f0486c0fae0d142d2 291 Gene3D G3DSA:1.10.10.10 2 87 3.4E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4671 01319efdfaef004f0486c0fae0d142d2 291 SUPERFAMILY SSF46785 1 87 8.27E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4671 01319efdfaef004f0486c0fae0d142d2 291 SUPERFAMILY SSF53850 89 290 9.41E-38 T 12-10-2018 PA257_4671 01319efdfaef004f0486c0fae0d142d2 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5247 63319c2422cce5c657ee5962e08d5016 404 Gene3D G3DSA:1.20.1720.10 15 389 8.1E-78 T 12-10-2018 PA257_5247 63319c2422cce5c657ee5962e08d5016 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 389 1.3E-94 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 PA257_5247 63319c2422cce5c657ee5962e08d5016 404 SUPERFAMILY SSF103473 8 394 4.97E-48 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_5247 63319c2422cce5c657ee5962e08d5016 404 Pfam PF07690 Major Facilitator Superfamily 24 355 4.9E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0305 63319c2422cce5c657ee5962e08d5016 404 Gene3D G3DSA:1.20.1720.10 15 389 8.1E-78 T 12-10-2018 PA257_0305 63319c2422cce5c657ee5962e08d5016 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 389 1.3E-94 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 PA257_0305 63319c2422cce5c657ee5962e08d5016 404 SUPERFAMILY SSF103473 8 394 4.97E-48 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0305 63319c2422cce5c657ee5962e08d5016 404 Pfam PF07690 Major Facilitator Superfamily 24 355 4.9E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_2197 5933d6f47a397ba70cad6030ace47d48 129 Pfam PF02501 Type II secretion system (T2SS), protein I 40 125 1.2E-29 T 12-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 PA257_2197 5933d6f47a397ba70cad6030ace47d48 129 Gene3D G3DSA:3.30.1300.30 33 126 1.8E-37 T 12-10-2018 PA257_2197 5933d6f47a397ba70cad6030ace47d48 129 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 105 2.6E-45 T 12-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 PA257_2197 5933d6f47a397ba70cad6030ace47d48 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2197 5933d6f47a397ba70cad6030ace47d48 129 SUPERFAMILY SSF54523 38 124 5.49E-22 T 12-10-2018 PA257_2197 5933d6f47a397ba70cad6030ace47d48 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 7.1E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2197 5933d6f47a397ba70cad6030ace47d48 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 5.3E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_4375 fdc4e7450173f9aa063566608d8256c2 503 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 20 448 5.1E-46 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 PA257_4375 fdc4e7450173f9aa063566608d8256c2 503 Gene3D G3DSA:1.10.4160.10 18 448 1.7E-30 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily PA257_4375 fdc4e7450173f9aa063566608d8256c2 503 PIRSF PIRSF002744 1 485 1.2E-96 T 12-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PA257_1259 334c85d17dcad695c7e92ad7d7bbcd81 131 Pfam PF05488 PAAR motif 2 52 2.2E-15 T 12-10-2018 IPR008727 PAAR motif PA257_1259 334c85d17dcad695c7e92ad7d7bbcd81 131 Gene3D G3DSA:2.60.200.60 1 58 4.5E-14 T 12-10-2018 PA257_2223 2a84eb7b6337d928701cd6ec2a98d8e8 790 SUPERFAMILY SSF82866 204 392 2.88E-25 T 12-10-2018 PA257_2223 2a84eb7b6337d928701cd6ec2a98d8e8 790 Pfam PF03176 MMPL family 476 774 2.5E-27 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 PA257_2223 2a84eb7b6337d928701cd6ec2a98d8e8 790 Gene3D G3DSA:1.20.1640.10 221 405 3.0E-5 T 12-10-2018 PA257_2223 2a84eb7b6337d928701cd6ec2a98d8e8 790 Gene3D G3DSA:1.20.1640.10 591 785 8.3E-15 T 12-10-2018 PA257_2223 2a84eb7b6337d928701cd6ec2a98d8e8 790 SUPERFAMILY SSF82866 576 776 5.49E-36 T 12-10-2018 PA257_2223 2a84eb7b6337d928701cd6ec2a98d8e8 790 Pfam PF02460 Patched family 175 305 9.9E-5 T 12-10-2018 IPR003392 Protein patched/dispatched GO:0016021 PA257_1683 a1392dfca881870cac18c8bb95642e27 395 Gene3D G3DSA:3.40.50.10540 8 353 4.6E-127 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily PA257_1683 a1392dfca881870cac18c8bb95642e27 395 SUPERFAMILY SSF89796 6 393 3.27E-135 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily PA257_1683 a1392dfca881870cac18c8bb95642e27 395 Pfam PF02515 CoA-transferase family III 8 370 4.5E-122 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 PA257_1683 a1392dfca881870cac18c8bb95642e27 395 Gene3D G3DSA:3.30.1540.10 229 320 4.6E-127 T 12-10-2018 PA257_5697 70be9a32ae1f0e31a21b638b2396b422 501 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 5 490 7.2E-190 T 12-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 PA257_1489 9a70588be9e3429d04ccc8819e70d533 231 Pfam PF04012 PspA/IM30 family 2 228 6.9E-66 T 12-10-2018 IPR007157 PspA/IM30 PA257_3666 892f3ca33c4619a92a6f593030611c6e 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 173 8.0E-22 T 12-10-2018 PA257_3666 892f3ca33c4619a92a6f593030611c6e 222 Gene3D G3DSA:3.40.50.1000 1 176 1.6E-44 T 12-10-2018 IPR023214 HAD superfamily PA257_3666 892f3ca33c4619a92a6f593030611c6e 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 53 172 8.1E-19 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_3666 892f3ca33c4619a92a6f593030611c6e 222 SUPERFAMILY SSF56784 1 194 9.8E-43 T 12-10-2018 IPR036412 HAD-like superfamily PA257_3666 892f3ca33c4619a92a6f593030611c6e 222 Gene3D G3DSA:1.10.150.240 9 72 1.6E-44 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PA257_1860 df97a08e8632af630ab1fd49d7947173 89 Pfam PF10976 Protein of unknown function (DUF2790) 10 87 4.5E-26 T 12-10-2018 IPR021245 Protein of unknown function DUF2790 PA257_1860 df97a08e8632af630ab1fd49d7947173 89 Gene3D G3DSA:2.30.140.50 19 89 2.9E-23 T 12-10-2018 PA257_4618 61e37f08801301a088086d0938a41d0f 393 SUPERFAMILY SSF89796 3 392 3.01E-124 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily PA257_4618 61e37f08801301a088086d0938a41d0f 393 Gene3D G3DSA:3.30.1540.10 227 321 1.0E-115 T 12-10-2018 PA257_4618 61e37f08801301a088086d0938a41d0f 393 Gene3D G3DSA:3.40.50.10540 4 386 1.0E-115 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily PA257_4618 61e37f08801301a088086d0938a41d0f 393 Pfam PF02515 CoA-transferase family III 5 360 6.6E-101 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 PA257_4023 78293e085cecd50a104cfda61b246034 126 SUPERFAMILY SSF52833 4 116 3.84E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4023 78293e085cecd50a104cfda61b246034 126 Gene3D G3DSA:3.40.30.10 12 114 2.2E-5 T 12-10-2018 PA257_6920 c5fac12d4dc41be5ddbcf9658690cff0 567 Pfam PF00999 Sodium/hydrogen exchanger family 12 384 4.2E-76 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PA257_6920 c5fac12d4dc41be5ddbcf9658690cff0 567 Pfam PF02254 TrkA-N domain 424 537 4.5E-23 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PA257_6920 c5fac12d4dc41be5ddbcf9658690cff0 567 SUPERFAMILY SSF51735 422 549 1.79E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6920 c5fac12d4dc41be5ddbcf9658690cff0 567 Gene3D G3DSA:3.40.50.720 418 553 2.2E-26 T 12-10-2018 PA257_6920 c5fac12d4dc41be5ddbcf9658690cff0 567 Gene3D G3DSA:1.20.1530.20 4 398 2.0E-78 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_6920 c5fac12d4dc41be5ddbcf9658690cff0 567 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 2.7E-73 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 Pfam PF00989 PAS fold 147 249 1.0E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 Gene3D G3DSA:3.30.70.270 256 431 7.7E-51 T 12-10-2018 PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 Gene3D G3DSA:3.40.50.2300 4 123 2.2E-6 T 12-10-2018 PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 SMART SM00052 439 683 1.6E-38 T 12-10-2018 IPR001633 EAL domain PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 251 2.6E-9 T 12-10-2018 IPR000014 PAS domain PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 SUPERFAMILY SSF52172 6 142 3.7E-9 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 Pfam PF00563 EAL domain 446 677 5.4E-58 T 12-10-2018 IPR001633 EAL domain PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 Pfam PF00990 Diguanylate cyclase, GGDEF domain 268 422 8.4E-19 T 12-10-2018 IPR000160 GGDEF domain PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 SUPERFAMILY SSF141868 446 681 7.32E-53 T 12-10-2018 IPR035919 EAL domain superfamily PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 Gene3D G3DSA:3.30.450.20 130 252 3.1E-16 T 12-10-2018 PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 SUPERFAMILY SSF55785 131 251 5.76E-16 T 12-10-2018 IPR035965 PAS domain superfamily PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 SUPERFAMILY SSF55073 273 430 4.87E-24 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 Gene3D G3DSA:3.20.20.450 441 691 2.5E-75 T 12-10-2018 IPR035919 EAL domain superfamily PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 424 1.2E-14 T 12-10-2018 IPR000160 GGDEF domain PA257_6242 8e52756397cb089fff4b9edd6cfb1124 691 SMART SM00267 256 428 3.1E-22 T 12-10-2018 IPR000160 GGDEF domain PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.9E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.9E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.9E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.9E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.9E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 Gene3D G3DSA:3.40.50.720 5 245 2.0E-71 T 12-10-2018 PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 4.6E-61 T 12-10-2018 PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.0E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.0E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.0E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 SUPERFAMILY SSF51735 7 244 6.91E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4323 eb8e36fb21c65b38c9d01937ade76b48 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.0039 T 12-10-2018 PA257_2592 4f6f60ab14521ffd87d706e5a89465f6 230 Pfam PF12833 Helix-turn-helix domain 142 219 3.6E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2592 4f6f60ab14521ffd87d706e5a89465f6 230 SMART SM00342 136 218 5.7E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2592 4f6f60ab14521ffd87d706e5a89465f6 230 Pfam PF12852 Cupin 26 105 8.3E-19 T 12-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain PA257_2592 4f6f60ab14521ffd87d706e5a89465f6 230 Gene3D G3DSA:1.10.10.60 116 223 3.4E-23 T 12-10-2018 PA257_2592 4f6f60ab14521ffd87d706e5a89465f6 230 SUPERFAMILY SSF46689 119 169 2.55E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2592 4f6f60ab14521ffd87d706e5a89465f6 230 SUPERFAMILY SSF46689 172 220 4.48E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4222 672c681ed43d402ec447f0cf5dc65869 92 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 13 91 25.999 T 12-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 PA257_4222 672c681ed43d402ec447f0cf5dc65869 92 Pfam PF01206 Sulfurtransferase TusA 21 89 6.1E-24 T 12-10-2018 IPR001455 TusA-like domain PA257_4222 672c681ed43d402ec447f0cf5dc65869 92 Gene3D G3DSA:3.30.110.40 12 90 8.9E-29 T 12-10-2018 IPR036868 TusA-like domain superfamily PA257_4222 672c681ed43d402ec447f0cf5dc65869 92 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 22 46 - T 12-10-2018 IPR001455 TusA-like domain PA257_4222 672c681ed43d402ec447f0cf5dc65869 92 SUPERFAMILY SSF64307 13 89 1.57E-25 T 12-10-2018 IPR036868 TusA-like domain superfamily PA257_5742 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.0E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5742 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.0E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5742 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.0E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5742 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.0E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5742 3250e70161daaf149ca278e456bf69e0 406 Pfam PF01018 GTP1/OBG 4 158 2.8E-60 T 12-10-2018 IPR006169 GTP1/OBG domain PA257_5742 3250e70161daaf149ca278e456bf69e0 406 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 4.8E-145 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PA257_5742 3250e70161daaf149ca278e456bf69e0 406 SUPERFAMILY SSF82051 2 158 2.62E-57 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily PA257_5742 3250e70161daaf149ca278e456bf69e0 406 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.483 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PA257_5742 3250e70161daaf149ca278e456bf69e0 406 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.5E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5742 3250e70161daaf149ca278e456bf69e0 406 Gene3D G3DSA:3.40.50.300 159 339 2.4E-48 T 12-10-2018 PA257_5742 3250e70161daaf149ca278e456bf69e0 406 SUPERFAMILY SSF52540 151 339 7.25E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5742 3250e70161daaf149ca278e456bf69e0 406 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 PA257_5742 3250e70161daaf149ca278e456bf69e0 406 Gene3D G3DSA:2.70.210.12 1 158 8.4E-63 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily PA257_5742 3250e70161daaf149ca278e456bf69e0 406 PIRSF PIRSF002401 1 378 1.6E-136 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type PA257_1185 92e1bb8c97ad1d5a33f226473019809e 361 PIRSF PIRSF038896 24 343 1.8E-99 T 12-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 PA257_1185 92e1bb8c97ad1d5a33f226473019809e 361 Pfam PF12706 Beta-lactamase superfamily domain 102 300 3.0E-42 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_1185 92e1bb8c97ad1d5a33f226473019809e 361 SUPERFAMILY SSF56281 84 306 7.31E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_1185 92e1bb8c97ad1d5a33f226473019809e 361 Gene3D G3DSA:3.60.15.10 73 359 7.6E-78 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_5458 bf319587685ea82636a23bdf0d4348d7 127 SUPERFAMILY SSF46767 29 110 3.92E-21 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 PA257_5458 bf319587685ea82636a23bdf0d4348d7 127 Gene3D G3DSA:1.10.10.10 24 127 5.3E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5458 bf319587685ea82636a23bdf0d4348d7 127 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 30 109 2.2E-20 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PA257_5019 d7e5376c991652b143860ba5d20f75db 213 SMART SM00849 18 195 3.6E-34 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_5019 d7e5376c991652b143860ba5d20f75db 213 Gene3D G3DSA:3.60.15.10 8 213 1.1E-60 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_5019 d7e5376c991652b143860ba5d20f75db 213 SUPERFAMILY SSF56281 8 212 9.8E-52 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_5019 d7e5376c991652b143860ba5d20f75db 213 Pfam PF00753 Metallo-beta-lactamase superfamily 15 195 1.0E-29 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_3315 7cf49da4e6a8a6d7bdf915611082e3ba 469 PIRSF PIRSF000337 2 448 5.1E-146 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PA257_3315 7cf49da4e6a8a6d7bdf915611082e3ba 469 Gene3D G3DSA:3.20.20.30 1 457 2.5E-147 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_3315 7cf49da4e6a8a6d7bdf915611082e3ba 469 Pfam PF00296 Luciferase-like monooxygenase 27 389 3.3E-53 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_3315 7cf49da4e6a8a6d7bdf915611082e3ba 469 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 7 434 1.5E-171 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PA257_3315 7cf49da4e6a8a6d7bdf915611082e3ba 469 SUPERFAMILY SSF51679 1 440 1.44E-128 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_1905 78339c5f4f1eba71162e0f45a2ab63b1 172 SUPERFAMILY SSF55729 28 167 1.68E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_1905 78339c5f4f1eba71162e0f45a2ab63b1 172 Gene3D G3DSA:3.40.630.30 28 169 5.7E-31 T 12-10-2018 PA257_1905 78339c5f4f1eba71162e0f45a2ab63b1 172 Pfam PF00583 Acetyltransferase (GNAT) family 58 160 2.9E-17 T 12-10-2018 IPR000182 GNAT domain PA257_2513 10a7f517688436188a51d0ec4899b02e 120 Pfam PF00216 Bacterial DNA-binding protein 18 106 6.4E-27 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2513 10a7f517688436188a51d0ec4899b02e 120 Gene3D G3DSA:4.10.520.10 18 107 4.5E-29 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_2513 10a7f517688436188a51d0ec4899b02e 120 SUPERFAMILY SSF47729 18 107 2.21E-26 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_2513 10a7f517688436188a51d0ec4899b02e 120 SMART SM00411 18 107 1.5E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2513 10a7f517688436188a51d0ec4899b02e 120 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 63 82 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PA257_2513 10a7f517688436188a51d0ec4899b02e 120 PRINTS PR01727 Prokaryotic integration host factor signature 57 72 9.3E-12 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2513 10a7f517688436188a51d0ec4899b02e 120 PRINTS PR01727 Prokaryotic integration host factor signature 75 88 9.3E-12 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2513 10a7f517688436188a51d0ec4899b02e 120 PRINTS PR01727 Prokaryotic integration host factor signature 91 105 9.3E-12 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_4738 2aaaa5346e87c49bf9be3dc3a579885b 261 Pfam PF00460 Flagella basal body rod protein 5 35 9.5E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PA257_4738 2aaaa5346e87c49bf9be3dc3a579885b 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 8.7E-117 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 PA257_4738 2aaaa5346e87c49bf9be3dc3a579885b 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site PA257_4738 2aaaa5346e87c49bf9be3dc3a579885b 261 SUPERFAMILY SSF117143 92 222 2.48E-36 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like PA257_4738 2aaaa5346e87c49bf9be3dc3a579885b 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 257 3.8E-26 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PA257_4738 2aaaa5346e87c49bf9be3dc3a579885b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 5.3E-32 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PA257_4738 2aaaa5346e87c49bf9be3dc3a579885b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 4.2E-49 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PA257_2500 b7fdfc5bac773d154d01caecbfebcc40 644 Gene3D G3DSA:1.10.443.10 211 403 6.5E-13 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_2500 b7fdfc5bac773d154d01caecbfebcc40 644 Gene3D G3DSA:3.30.160.390 2 99 5.2E-31 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily PA257_2500 b7fdfc5bac773d154d01caecbfebcc40 644 Pfam PF00589 Phage integrase family 214 392 1.4E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_2500 b7fdfc5bac773d154d01caecbfebcc40 644 SUPERFAMILY SSF56349 100 402 2.03E-48 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_2500 b7fdfc5bac773d154d01caecbfebcc40 644 Gene3D G3DSA:1.10.150.130 100 210 3.3E-24 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_2500 b7fdfc5bac773d154d01caecbfebcc40 644 Pfam PF13356 Arm DNA-binding domain 7 88 1.1E-17 T 12-10-2018 IPR025166 Integrase, DNA-binding domain PA257_6541 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6541 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6541 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6541 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 SUPERFAMILY SSF46785 4 84 1.57E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6541 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Gene3D G3DSA:3.40.190.10 90 293 4.8E-58 T 12-10-2018 PA257_6541 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.5E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6541 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Gene3D G3DSA:3.40.190.10 171 268 4.8E-58 T 12-10-2018 PA257_6541 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Pfam PF03466 LysR substrate binding domain 94 296 3.7E-28 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6541 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 SUPERFAMILY SSF53850 90 296 2.33E-39 T 12-10-2018 PA257_6541 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Gene3D G3DSA:1.10.10.10 1 88 1.7E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6199 e1ef486465ae82017fe70a44f2dab472 275 Gene3D G3DSA:3.40.50.620 1 275 8.2E-86 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_6199 e1ef486465ae82017fe70a44f2dab472 275 Pfam PF02540 NAD synthase 28 272 8.4E-65 T 12-10-2018 IPR022310 NAD/GMP synthase PA257_6199 e1ef486465ae82017fe70a44f2dab472 275 SUPERFAMILY SSF52402 20 272 3.45E-77 T 12-10-2018 PA257_6199 e1ef486465ae82017fe70a44f2dab472 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 23 275 50.743 T 12-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 PA257_6199 e1ef486465ae82017fe70a44f2dab472 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 27 273 1.0E-67 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 PA257_0259 624ed817f14cdeb5df6accf94e82eacc 133 Gene3D G3DSA:1.20.1290.10 4 125 2.0E-40 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_0259 624ed817f14cdeb5df6accf94e82eacc 133 SUPERFAMILY SSF69118 4 127 2.64E-38 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_0259 624ed817f14cdeb5df6accf94e82eacc 133 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 3 124 3.9E-59 T 12-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 PA257_0259 624ed817f14cdeb5df6accf94e82eacc 133 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 3.9E-24 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 2.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 Pfam PF00106 short chain dehydrogenase 10 196 2.7E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 Gene3D G3DSA:3.30.160.260 250 301 4.1E-13 T 12-10-2018 PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 184 1.8E-5 T 12-10-2018 PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 3.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 3.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 3.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 Gene3D G3DSA:3.40.50.720 1 249 9.7E-74 T 12-10-2018 PA257_1844 b3765b56c7f3695814edcfedc241ff40 303 SUPERFAMILY SSF51735 5 252 1.03E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6158 2cb8171d4a0f53d8c587f09fb9f950e7 177 Gene3D G3DSA:1.20.1260.10 23 177 2.8E-55 T 12-10-2018 IPR012347 Ferritin-like PA257_6158 2cb8171d4a0f53d8c587f09fb9f950e7 177 SUPERFAMILY SSF47240 31 175 5.02E-38 T 12-10-2018 IPR009078 Ferritin-like superfamily PA257_6158 2cb8171d4a0f53d8c587f09fb9f950e7 177 PRINTS PR00601 Bacterioferritin signature 73 93 2.1E-6 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_6158 2cb8171d4a0f53d8c587f09fb9f950e7 177 PRINTS PR00601 Bacterioferritin signature 32 51 2.1E-6 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_6158 2cb8171d4a0f53d8c587f09fb9f950e7 177 PRINTS PR00601 Bacterioferritin signature 163 177 2.1E-6 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_6158 2cb8171d4a0f53d8c587f09fb9f950e7 177 Pfam PF00210 Ferritin-like domain 39 176 3.4E-28 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PA257_6158 2cb8171d4a0f53d8c587f09fb9f950e7 177 PIRSF PIRSF018063 12 177 8.1E-65 T 12-10-2018 IPR014490 DNA-binding protein from starved cells-like PA257_5634 76305b91dfdfaa1142781614229c8f3e 255 Pfam PF11198 Protein of unknown function (DUF2857) 7 190 8.3E-46 T 12-10-2018 IPR021364 Protein of unknown function DUF2857 PA257_0192 be95ae230cc5f23952efe472f3255553 278 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 64 278 6.1E-18 T 12-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PA257_0192 be95ae230cc5f23952efe472f3255553 278 SUPERFAMILY SSF111364 39 278 5.49E-76 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 PA257_0192 be95ae230cc5f23952efe472f3255553 278 Gene3D G3DSA:2.40.230.20 36 278 1.7E-27 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 PA257_3236 260f2f1242743a0ac23a83806c2be1d5 179 PIRSF PIRSF029505 1 179 2.2E-95 T 12-10-2018 IPR016922 Uncharacterised conserved protein UCP029505 PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 2 123 6.5E-37 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 145 206 4.3E-12 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 SUPERFAMILY SSF49354 2 123 3.4E-35 T 12-10-2018 IPR008962 PapD-like superfamily PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 Gene3D G3DSA:2.60.40.10 2 124 5.6E-36 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 SUPERFAMILY SSF49584 117 209 9.94E-15 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 Gene3D G3DSA:2.60.40.10 126 215 8.7E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 PRINTS PR00969 Pili chaperone signature 105 120 1.6E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 PRINTS PR00969 Pili chaperone signature 78 95 1.6E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 PRINTS PR00969 Pili chaperone signature 140 155 1.6E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 PRINTS PR00969 Pili chaperone signature 1 10 1.6E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_3599 918aa9cbb00b86ce9357cb9ad2153832 215 PRINTS PR00969 Pili chaperone signature 50 71 1.6E-28 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_3084 a3cd103241e05720c1cba7a2ac97fb94 252 SUPERFAMILY SSF51215 5 116 1.7E-21 T 12-10-2018 IPR037923 Transcription regulator HTH-like PA257_3084 a3cd103241e05720c1cba7a2ac97fb94 252 SMART SM00342 164 246 2.7E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3084 a3cd103241e05720c1cba7a2ac97fb94 252 Pfam PF12833 Helix-turn-helix domain 170 247 1.7E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3084 a3cd103241e05720c1cba7a2ac97fb94 252 Pfam PF02311 AraC-like ligand binding domain 2 127 2.6E-26 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_3084 a3cd103241e05720c1cba7a2ac97fb94 252 Gene3D G3DSA:1.10.10.60 149 250 5.7E-25 T 12-10-2018 PA257_3084 a3cd103241e05720c1cba7a2ac97fb94 252 SUPERFAMILY SSF46689 151 198 4.3E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3084 a3cd103241e05720c1cba7a2ac97fb94 252 SUPERFAMILY SSF46689 200 247 2.33E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2407 7bc7645e69bd553be3450904d42cb6a6 559 Gene3D G3DSA:3.40.1010.10 302 422 3.6E-27 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PA257_2407 7bc7645e69bd553be3450904d42cb6a6 559 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 310 556 9.5E-85 T 12-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 PA257_2407 7bc7645e69bd553be3450904d42cb6a6 559 SUPERFAMILY SSF53790 307 556 5.1E-53 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PA257_2407 7bc7645e69bd553be3450904d42cb6a6 559 Pfam PF11760 Cobalamin synthesis G N-terminal 52 130 6.3E-23 T 12-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 PA257_2407 7bc7645e69bd553be3450904d42cb6a6 559 Gene3D G3DSA:3.30.950.10 423 558 1.7E-51 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PA257_2407 7bc7645e69bd553be3450904d42cb6a6 559 Gene3D G3DSA:3.40.50.11220 10 126 9.9E-15 T 12-10-2018 PA257_2407 7bc7645e69bd553be3450904d42cb6a6 559 SUPERFAMILY SSF159672 8 212 8.24E-42 T 12-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 PA257_2407 7bc7645e69bd553be3450904d42cb6a6 559 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 309 520 2.1E-32 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 Pfam PF02743 Cache domain 38 260 9.1E-32 T 12-10-2018 IPR033479 Double Cache domain 1 PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 Gene3D G3DSA:3.30.450.20 66 174 8.7E-70 T 12-10-2018 PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 Gene3D G3DSA:1.10.287.950 298 629 2.5E-75 T 12-10-2018 PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 SUPERFAMILY SSF103190 84 184 3.92E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 Pfam PF00672 HAMP domain 299 348 3.1E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 Gene3D G3DSA:3.30.450.20 54 272 8.7E-70 T 12-10-2018 PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 SMART SM00283 367 628 7.2E-96 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 SUPERFAMILY SSF58104 320 629 8.24E-76 T 12-10-2018 PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 594 9.3E-45 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 SMART SM00304 298 352 1.6E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5372 ef00a42b229f10dfe11bc4b885c693cf 629 SMART SM00304 387 447 18.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 SUPERFAMILY SSF48179 180 331 1.55E-49 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 SUPERFAMILY SSF51735 7 178 1.43E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4168 5699b84dcc716f763528bc5184e8550f 340 PIRSF PIRSF000114 1 332 7.1E-108 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 1.2E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 1.2E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 1.2E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 1.2E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 1.2E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 59 86 1.2E-38 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 Gene3D G3DSA:1.10.1040.10 189 334 7.6E-48 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 Gene3D G3DSA:3.40.50.720 1 187 5.3E-60 T 12-10-2018 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 322 35.435 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 320 5.9E-47 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_4168 5699b84dcc716f763528bc5184e8550f 340 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 160 1.2E-51 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PA257_2987 3fe120eeb11ab3124678680eb9b0ed18 299 Pfam PF00892 EamA-like transporter family 154 282 1.4E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_2987 3fe120eeb11ab3124678680eb9b0ed18 299 Pfam PF00892 EamA-like transporter family 18 139 3.8E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_2987 3fe120eeb11ab3124678680eb9b0ed18 299 SUPERFAMILY SSF103481 39 141 4.32E-12 T 12-10-2018 PA257_2987 3fe120eeb11ab3124678680eb9b0ed18 299 SUPERFAMILY SSF103481 190 286 1.14E-12 T 12-10-2018 PA257_3692 95e2775e94ce67857c3f6648531b5af1 300 Pfam PF00849 RNA pseudouridylate synthase 95 242 5.9E-22 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_3692 95e2775e94ce67857c3f6648531b5af1 300 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_3692 95e2775e94ce67857c3f6648531b5af1 300 SUPERFAMILY SSF55120 81 298 5.55E-50 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_3692 95e2775e94ce67857c3f6648531b5af1 300 Gene3D G3DSA:3.30.2350.10 79 294 4.3E-40 T 12-10-2018 PA257_3609 cfdd15d43e6e3af172cc7e5d39475da6 545 Pfam PF05199 GMC oxidoreductase 402 539 1.2E-37 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PA257_3609 cfdd15d43e6e3af172cc7e5d39475da6 545 Gene3D G3DSA:3.30.410.40 192 482 3.1E-154 T 12-10-2018 PA257_3609 cfdd15d43e6e3af172cc7e5d39475da6 545 SUPERFAMILY SSF51905 51 545 5.61E-68 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3609 cfdd15d43e6e3af172cc7e5d39475da6 545 PIRSF PIRSF000137 363 545 2.6E-42 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_3609 cfdd15d43e6e3af172cc7e5d39475da6 545 PIRSF PIRSF000137 34 379 1.2E-71 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_3609 cfdd15d43e6e3af172cc7e5d39475da6 545 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 296 310 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_3609 cfdd15d43e6e3af172cc7e5d39475da6 545 Pfam PF00732 GMC oxidoreductase 53 336 2.6E-61 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_3609 cfdd15d43e6e3af172cc7e5d39475da6 545 SUPERFAMILY SSF54373 356 487 8.54E-31 T 12-10-2018 PA257_3609 cfdd15d43e6e3af172cc7e5d39475da6 545 Gene3D G3DSA:3.50.50.60 53 542 3.1E-154 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2069 2d333e66e887738ca10e8b38703c61df 128 Gene3D G3DSA:2.40.50.100 1 126 8.1E-35 T 12-10-2018 PA257_2069 2d333e66e887738ca10e8b38703c61df 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PA257_2069 2d333e66e887738ca10e8b38703c61df 128 SUPERFAMILY SSF51230 2 124 6.15E-32 T 12-10-2018 IPR011053 Single hybrid motif PA257_2069 2d333e66e887738ca10e8b38703c61df 128 Pfam PF01597 Glycine cleavage H-protein 2 124 3.2E-28 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate PA257_0263 46107c3f826938c2deba14addb744b8d 259 SMART SM00346 2 93 1.2E-19 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_0263 46107c3f826938c2deba14addb744b8d 259 Pfam PF09339 IclR helix-turn-helix domain 6 56 2.5E-17 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_0263 46107c3f826938c2deba14addb744b8d 259 Pfam PF01614 Bacterial transcriptional regulator 124 250 6.6E-19 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal PA257_0263 46107c3f826938c2deba14addb744b8d 259 SUPERFAMILY SSF46785 6 76 1.07E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0263 46107c3f826938c2deba14addb744b8d 259 Gene3D G3DSA:1.10.10.10 4 76 2.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0263 46107c3f826938c2deba14addb744b8d 259 SUPERFAMILY SSF55781 70 251 1.37E-38 T 12-10-2018 PA257_0263 46107c3f826938c2deba14addb744b8d 259 Gene3D G3DSA:3.30.450.40 77 256 9.4E-43 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 359 370 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 SUPERFAMILY SSF142984 258 341 8.89E-19 T 12-10-2018 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 349 431 2.6E-24 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 SUPERFAMILY SSF142019 26 253 4.84E-86 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 SMART SM00928 346 391 2.8E-21 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 SUPERFAMILY SSF140490 343 436 1.23E-29 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 Gene3D G3DSA:3.40.50.11540 67 246 2.5E-78 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 Gene3D G3DSA:1.20.1440.230 344 444 9.1E-26 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 Gene3D G3DSA:3.10.20.600 251 343 1.7E-22 T 12-10-2018 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 182 197 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 234 1.3E-51 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2914 283d956f5d421e1f2c7696bd3becf15d 448 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 433 1.4E-196 T 12-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_0593 f9e56d7c3d24128acc1a41d22acaea7c 458 SMART SM00487 23 220 5.5E-59 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_0593 f9e56d7c3d24128acc1a41d22acaea7c 458 Gene3D G3DSA:3.40.50.300 2 210 3.3E-73 T 12-10-2018 PA257_0593 f9e56d7c3d24128acc1a41d22acaea7c 458 Pfam PF03880 DbpA RNA binding domain 386 456 7.0E-24 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain PA257_0593 f9e56d7c3d24128acc1a41d22acaea7c 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PA257_0593 f9e56d7c3d24128acc1a41d22acaea7c 458 SMART SM00490 256 337 1.2E-27 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_0593 f9e56d7c3d24128acc1a41d22acaea7c 458 Gene3D G3DSA:3.30.70.330 386 457 3.0E-20 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PA257_0593 f9e56d7c3d24128acc1a41d22acaea7c 458 Pfam PF00270 DEAD/DEAH box helicase 28 195 2.5E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_0593 f9e56d7c3d24128acc1a41d22acaea7c 458 Pfam PF00271 Helicase conserved C-terminal domain 230 337 1.3E-25 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_0593 f9e56d7c3d24128acc1a41d22acaea7c 458 Gene3D G3DSA:3.40.50.300 211 367 2.6E-44 T 12-10-2018 PA257_0593 f9e56d7c3d24128acc1a41d22acaea7c 458 SUPERFAMILY SSF52540 72 357 2.79E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6474 363851cce1dba26cd0c5bd440aa1bd24 152 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 16 145 8.4E-32 T 12-10-2018 IPR006522 Phage virion morphogensis protein PA257_6474 363851cce1dba26cd0c5bd440aa1bd24 152 Pfam PF05069 Phage virion morphogenesis family 4 150 6.5E-40 T 12-10-2018 IPR006522 Phage virion morphogensis protein PA257_2519 6ae18e66039683000a69375f32d860f3 307 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 14 277 2.1E-111 T 12-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 PA257_2519 6ae18e66039683000a69375f32d860f3 307 Pfam PF11920 Protein of unknown function (DUF3438) 11 286 3.2E-125 T 12-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 PA257_3628 e10e125827a828592dbcae3d242c18f5 313 SUPERFAMILY SSF50891 200 294 6.45E-6 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_3628 e10e125827a828592dbcae3d242c18f5 313 SMART SM00797 30 311 2.9E-118 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PA257_3628 e10e125827a828592dbcae3d242c18f5 313 Gene3D G3DSA:2.40.100.10 184 312 5.2E-35 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_3628 e10e125827a828592dbcae3d242c18f5 313 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 31 292 1.0E-73 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PA257_0750 ce19a4b647afb21915221c6001467326 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.7E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0750 ce19a4b647afb21915221c6001467326 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.7E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0750 ce19a4b647afb21915221c6001467326 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.7E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0750 ce19a4b647afb21915221c6001467326 210 Gene3D G3DSA:3.40.50.12740 3 210 4.3E-59 T 12-10-2018 PA257_0750 ce19a4b647afb21915221c6001467326 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 1.7E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0750 ce19a4b647afb21915221c6001467326 210 SUPERFAMILY SSF52172 3 133 3.98E-33 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0750 ce19a4b647afb21915221c6001467326 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0750 ce19a4b647afb21915221c6001467326 210 SUPERFAMILY SSF46894 138 209 3.4E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_0750 ce19a4b647afb21915221c6001467326 210 Pfam PF00072 Response regulator receiver domain 5 117 4.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0750 ce19a4b647afb21915221c6001467326 210 SMART SM00448 3 116 3.4E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0750 ce19a4b647afb21915221c6001467326 210 SMART SM00421 147 204 1.4E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4453 0917ac4a97da383c5c72a554e9057386 222 SUPERFAMILY SSF161098 12 206 2.09E-40 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4453 0917ac4a97da383c5c72a554e9057386 222 Gene3D G3DSA:1.10.3720.10 1 221 1.9E-49 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4453 0917ac4a97da383c5c72a554e9057386 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 221 2.0E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_4453 0917ac4a97da383c5c72a554e9057386 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 115 4.0E-25 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_2019 44f5cfcef2070990b8e97f0509699a72 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 1.7E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_2019 44f5cfcef2070990b8e97f0509699a72 69 PIRSF PIRSF002599 1 69 1.3E-22 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 PA257_2019 44f5cfcef2070990b8e97f0509699a72 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 12-10-2018 IPR019844 Cold-shock conserved site PA257_2019 44f5cfcef2070990b8e97f0509699a72 69 SUPERFAMILY SSF50249 3 68 9.64E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2019 44f5cfcef2070990b8e97f0509699a72 69 SMART SM00357 6 69 3.9E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 PA257_2019 44f5cfcef2070990b8e97f0509699a72 69 Gene3D G3DSA:2.40.50.140 4 68 2.7E-27 T 12-10-2018 PA257_2019 44f5cfcef2070990b8e97f0509699a72 69 PRINTS PR00050 Cold shock protein signature 7 22 6.6E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_2019 44f5cfcef2070990b8e97f0509699a72 69 PRINTS PR00050 Cold shock protein signature 42 60 6.6E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_2019 44f5cfcef2070990b8e97f0509699a72 69 PRINTS PR00050 Cold shock protein signature 27 36 6.6E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_3077 a0606c3e8ef799bf898a6c079a3e706f 171 Gene3D G3DSA:1.20.120.450 6 164 6.5E-21 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PA257_3077 a0606c3e8ef799bf898a6c079a3e706f 171 Pfam PF05163 DinB family 1 170 1.1E-41 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB PA257_3077 a0606c3e8ef799bf898a6c079a3e706f 171 SUPERFAMILY SSF109854 15 161 5.34E-21 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 Pfam PF01494 FAD binding domain 2 343 3.3E-97 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 Gene3D G3DSA:3.50.50.60 3 351 8.6E-175 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.5E-32 T 12-10-2018 PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.5E-32 T 12-10-2018 PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 328 1.5E-32 T 12-10-2018 PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 1.5E-32 T 12-10-2018 PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.5E-32 T 12-10-2018 PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 4.5E-220 T 12-10-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 SUPERFAMILY SSF54373 175 275 8.63E-46 T 12-10-2018 PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 SUPERFAMILY SSF51905 1 389 1.79E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0274 05026d1a3654fdffc319ee3976d0cff4 394 Gene3D G3DSA:3.30.9.10 73 387 8.6E-175 T 12-10-2018 PA257_4748 3cbd73cc73c643a2d3d774a501642052 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 291 2.6E-54 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PA257_6336 62e0f85a27e0a9cc28284b329b315f5f 823 Pfam PF17092 Penicillin-binding protein OB-like domain 316 421 3.6E-25 T 12-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_6336 62e0f85a27e0a9cc28284b329b315f5f 823 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 752 6.6E-188 T 12-10-2018 PA257_6336 62e0f85a27e0a9cc28284b329b315f5f 823 Pfam PF00905 Penicillin binding protein transpeptidase domain 428 608 5.1E-24 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PA257_6336 62e0f85a27e0a9cc28284b329b315f5f 823 Pfam PF00905 Penicillin binding protein transpeptidase domain 649 742 3.9E-6 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PA257_6336 62e0f85a27e0a9cc28284b329b315f5f 823 SUPERFAMILY SSF56601 211 802 4.27E-130 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_6336 62e0f85a27e0a9cc28284b329b315f5f 823 Gene3D G3DSA:1.10.3810.10 48 242 2.5E-77 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_6336 62e0f85a27e0a9cc28284b329b315f5f 823 SUPERFAMILY SSF53955 43 255 1.01E-77 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_6336 62e0f85a27e0a9cc28284b329b315f5f 823 Gene3D G3DSA:2.40.50.140 316 418 8.5E-39 T 12-10-2018 PA257_6336 62e0f85a27e0a9cc28284b329b315f5f 823 Pfam PF00912 Transglycosylase 55 229 3.9E-65 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_3083 99cca0803c169682f18a4833539e4a82 124 Gene3D G3DSA:2.60.120.10 5 106 2.0E-36 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_3083 99cca0803c169682f18a4833539e4a82 124 SUPERFAMILY SSF51182 5 110 3.66E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_3083 99cca0803c169682f18a4833539e4a82 124 Pfam PF07883 Cupin domain 42 101 7.4E-13 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_0322 1276d13c52e7f8468ef862f1f2c42d23 215 SMART SM00857 4 162 1.6E-35 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_0322 1276d13c52e7f8468ef862f1f2c42d23 215 Gene3D G3DSA:1.10.10.60 170 215 3.9E-6 T 12-10-2018 PA257_0322 1276d13c52e7f8468ef862f1f2c42d23 215 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PA257_0322 1276d13c52e7f8468ef862f1f2c42d23 215 SUPERFAMILY SSF53041 5 157 1.83E-27 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PA257_0322 1276d13c52e7f8468ef862f1f2c42d23 215 Pfam PF00239 Resolvase, N terminal domain 6 158 4.3E-29 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_0322 1276d13c52e7f8468ef862f1f2c42d23 215 Gene3D G3DSA:3.40.50.1390 2 169 1.9E-29 T 12-10-2018 PA257_0322 1276d13c52e7f8468ef862f1f2c42d23 215 Pfam PF02796 Helix-turn-helix domain of resolvase 174 212 1.4E-5 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 PA257_1140 62a9e4fe038efc45c4c81ea597fd96ea 236 Pfam PF04172 LrgB-like family 21 233 1.3E-72 T 12-10-2018 IPR007300 CidB/LrgB family PA257_0617 3d66c4ec35e202354f26b98333696563 321 SUPERFAMILY SSF53850 105 315 2.11E-44 T 12-10-2018 PA257_0617 3d66c4ec35e202354f26b98333696563 321 Gene3D G3DSA:3.40.190.10 105 307 4.8E-75 T 12-10-2018 PA257_0617 3d66c4ec35e202354f26b98333696563 321 Gene3D G3DSA:1.10.10.10 12 104 2.4E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0617 3d66c4ec35e202354f26b98333696563 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 82 6.4E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0617 3d66c4ec35e202354f26b98333696563 321 SUPERFAMILY SSF46785 18 102 4.08E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0617 3d66c4ec35e202354f26b98333696563 321 Pfam PF03466 LysR substrate binding domain 109 312 7.1E-25 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0617 3d66c4ec35e202354f26b98333696563 321 Gene3D G3DSA:3.40.190.10 189 287 4.8E-75 T 12-10-2018 PA257_5914 6e76954f8f69b128c04643028582135b 115 SUPERFAMILY SSF141571 34 91 6.93E-12 T 12-10-2018 PA257_5914 6e76954f8f69b128c04643028582135b 115 PIRSF PIRSF029688 1 115 6.0E-72 T 12-10-2018 IPR016933 Pentapeptide repeat-containing uncharacterised conserved protein UCP029688 PA257_5914 6e76954f8f69b128c04643028582135b 115 Gene3D G3DSA:2.160.20.80 17 91 4.4E-13 T 12-10-2018 PA257_5914 6e76954f8f69b128c04643028582135b 115 Pfam PF00805 Pentapeptide repeats (8 copies) 54 90 7.2E-10 T 12-10-2018 IPR001646 Pentapeptide repeat PA257_5500 53b6835ec36fc2082341824ff5d05432 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 2.9E-66 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5500 53b6835ec36fc2082341824ff5d05432 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.956 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PA257_5500 53b6835ec36fc2082341824ff5d05432 142 Gene3D G3DSA:3.90.1180.10 1 142 4.4E-65 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 PA257_5500 53b6835ec36fc2082341824ff5d05432 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 PA257_5500 53b6835ec36fc2082341824ff5d05432 142 Pfam PF00572 Ribosomal protein L13 15 138 8.2E-59 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PA257_5500 53b6835ec36fc2082341824ff5d05432 142 PIRSF PIRSF002181 1 142 2.8E-53 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PA257_5500 53b6835ec36fc2082341824ff5d05432 142 SUPERFAMILY SSF52161 1 139 2.49E-61 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 PA257_3717 65226eee99db74bf3bbcc49f63bc0e4e 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 8.4E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3717 65226eee99db74bf3bbcc49f63bc0e4e 210 Gene3D G3DSA:1.10.357.10 1 210 3.1E-91 T 12-10-2018 PA257_3717 65226eee99db74bf3bbcc49f63bc0e4e 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3717 65226eee99db74bf3bbcc49f63bc0e4e 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3717 65226eee99db74bf3bbcc49f63bc0e4e 210 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 93 171 7.5E-8 T 12-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 PA257_3717 65226eee99db74bf3bbcc49f63bc0e4e 210 SUPERFAMILY SSF48498 82 198 2.22E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_3717 65226eee99db74bf3bbcc49f63bc0e4e 210 SUPERFAMILY SSF46689 3 70 1.1E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5158 a01eff42a0b49d217369049d869c8374 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 9.7E-138 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane PA257_5274 e84dd3214352895497149a577c3df303 213 Gene3D G3DSA:3.40.190.10 11 198 3.7E-25 T 12-10-2018 PA257_5274 e84dd3214352895497149a577c3df303 213 SUPERFAMILY SSF53850 9 200 6.52E-27 T 12-10-2018 PA257_5274 e84dd3214352895497149a577c3df303 213 Gene3D G3DSA:3.40.190.10 81 183 3.7E-25 T 12-10-2018 PA257_5274 e84dd3214352895497149a577c3df303 213 Pfam PF03466 LysR substrate binding domain 10 200 2.9E-26 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6830 02ad67b1b5d87ed0fc130fdf5d671ec2 224 Pfam PF13302 Acetyltransferase (GNAT) domain 47 165 2.3E-11 T 12-10-2018 IPR000182 GNAT domain PA257_6830 02ad67b1b5d87ed0fc130fdf5d671ec2 224 SUPERFAMILY SSF55729 15 189 5.51E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6830 02ad67b1b5d87ed0fc130fdf5d671ec2 224 Gene3D G3DSA:3.40.630.30 5 224 6.2E-65 T 12-10-2018 PA257_2067 66826ff62ac434295d987cd168a70010 213 SUPERFAMILY SSF52218 1 199 1.45E-58 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_2067 66826ff62ac434295d987cd168a70010 213 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.79 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 PA257_2067 66826ff62ac434295d987cd168a70010 213 Pfam PF02525 Flavodoxin-like fold 3 198 1.9E-49 T 12-10-2018 IPR003680 Flavodoxin-like fold PA257_2067 66826ff62ac434295d987cd168a70010 213 Gene3D G3DSA:3.40.50.360 2 199 8.5E-64 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_1878 ca5a5da47684f59c4eddfcd479e35be2 275 Pfam PF12679 ABC-2 family transporter protein 5 273 4.8E-39 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.2E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.2E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.2E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.2E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 4.2E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 Pfam PF00106 short chain dehydrogenase 3 185 3.6E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 SUPERFAMILY SSF51735 3 247 3.5E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 166 7.8E-4 T 12-10-2018 PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 6.6E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 6.6E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 6.6E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3632 b7f87b95376315ceb58ba57229e2f910 252 Gene3D G3DSA:3.40.50.720 2 223 3.5E-54 T 12-10-2018 PA257_6890 54e0a552c9337f188953c6e4ac04c554 211 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PA257_6890 54e0a552c9337f188953c6e4ac04c554 211 Gene3D G3DSA:3.40.30.10 20 211 3.4E-58 T 12-10-2018 PA257_6890 54e0a552c9337f188953c6e4ac04c554 211 Pfam PF01323 DSBA-like thioredoxin domain 96 182 4.0E-15 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 PA257_6890 54e0a552c9337f188953c6e4ac04c554 211 PIRSF PIRSF001488 1 209 1.0E-77 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL PA257_6890 54e0a552c9337f188953c6e4ac04c554 211 SUPERFAMILY SSF52833 25 203 4.03E-45 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_1567 cbfb8b68f9452577f28cbbc4968e9e3f 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 10 243 44.024 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 PA257_1567 cbfb8b68f9452577f28cbbc4968e9e3f 245 Gene3D G3DSA:3.40.1160.10 2 244 4.3E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_1567 cbfb8b68f9452577f28cbbc4968e9e3f 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 12 243 8.9E-99 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 PA257_1567 cbfb8b68f9452577f28cbbc4968e9e3f 245 Pfam PF00696 Amino acid kinase family 13 222 1.0E-26 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PA257_1567 cbfb8b68f9452577f28cbbc4968e9e3f 245 PIRSF PIRSF005650 7 245 7.3E-89 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 PA257_1567 cbfb8b68f9452577f28cbbc4968e9e3f 245 SUPERFAMILY SSF53633 10 242 7.99E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_6160 3ef66a794258e12288b8ade500ab48ae 255 Pfam PF00174 Oxidoreductase molybdopterin binding domain 100 244 1.2E-35 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PA257_6160 3ef66a794258e12288b8ade500ab48ae 255 Gene3D G3DSA:3.90.420.10 80 254 9.5E-54 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_6160 3ef66a794258e12288b8ade500ab48ae 255 SUPERFAMILY SSF56524 49 254 3.4E-66 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_1773 55d11b3a8bb74315ec37aba1ebac66f4 238 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 210 8.2E-88 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 PA257_1773 55d11b3a8bb74315ec37aba1ebac66f4 238 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 212 26.741 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 PA257_1773 55d11b3a8bb74315ec37aba1ebac66f4 238 PIRSF PIRSF006102 2 220 8.1E-74 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 PA257_1773 55d11b3a8bb74315ec37aba1ebac66f4 238 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 202 3.6E-62 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 PA257_2806 c17c62d0467f3ba379d4298e2891e80d 100 Gene3D G3DSA:4.10.520.10 2 98 5.9E-37 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_2806 c17c62d0467f3ba379d4298e2891e80d 100 Pfam PF00216 Bacterial DNA-binding protein 4 92 1.6E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2806 c17c62d0467f3ba379d4298e2891e80d 100 SMART SM00411 4 93 2.0E-41 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2806 c17c62d0467f3ba379d4298e2891e80d 100 SUPERFAMILY SSF47729 4 93 2.94E-31 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_2806 c17c62d0467f3ba379d4298e2891e80d 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 30.539 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 PA257_2806 c17c62d0467f3ba379d4298e2891e80d 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 97 1.3E-54 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 PA257_2806 c17c62d0467f3ba379d4298e2891e80d 100 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.6E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2806 c17c62d0467f3ba379d4298e2891e80d 100 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.6E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2806 c17c62d0467f3ba379d4298e2891e80d 100 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.6E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_2806 c17c62d0467f3ba379d4298e2891e80d 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PA257_1541 2ee4a08e6da0d81cca1094bd47d08524 261 Pfam PF04445 Putative SAM-dependent methyltransferase 33 254 2.5E-92 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 PA257_1541 2ee4a08e6da0d81cca1094bd47d08524 261 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 9 256 39.987 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 PA257_1541 2ee4a08e6da0d81cca1094bd47d08524 261 Gene3D G3DSA:3.40.50.150 65 260 7.0E-75 T 12-10-2018 PA257_1541 2ee4a08e6da0d81cca1094bd47d08524 261 SUPERFAMILY SSF53335 14 256 1.07E-75 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6413 2a17f0b198bb5b2ddb1e5bdba8be6a1c 735 Gene3D G3DSA:3.30.70.100 614 702 7.7E-18 T 12-10-2018 PA257_6413 2a17f0b198bb5b2ddb1e5bdba8be6a1c 735 SUPERFAMILY SSF82689 612 712 7.72E-12 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PA257_6413 2a17f0b198bb5b2ddb1e5bdba8be6a1c 735 Gene3D G3DSA:2.30.30.60 563 611 8.4E-15 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PA257_6413 2a17f0b198bb5b2ddb1e5bdba8be6a1c 735 SUPERFAMILY SSF50182 547 610 1.83E-12 T 12-10-2018 IPR010920 LSM domain superfamily PA257_6413 2a17f0b198bb5b2ddb1e5bdba8be6a1c 735 SUPERFAMILY SSF82861 463 545 1.44E-13 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PA257_6413 2a17f0b198bb5b2ddb1e5bdba8be6a1c 735 Pfam PF00924 Mechanosensitive ion channel 504 703 7.7E-39 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PA257_4220 b45445694032d6cfad7dee0c5204fc59 454 Gene3D G3DSA:3.30.590.10 120 454 5.9E-101 T 12-10-2018 PA257_4220 b45445694032d6cfad7dee0c5204fc59 454 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 253 268 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PA257_4220 b45445694032d6cfad7dee0c5204fc59 454 SMART SM01230 117 372 7.0E-98 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_4220 b45445694032d6cfad7dee0c5204fc59 454 SUPERFAMILY SSF54368 9 112 7.59E-7 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_4220 b45445694032d6cfad7dee0c5204fc59 454 SUPERFAMILY SSF55931 119 451 2.06E-104 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_4220 b45445694032d6cfad7dee0c5204fc59 454 Pfam PF00120 Glutamine synthetase, catalytic domain 118 450 4.6E-107 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_5011 45537a1588a2fad542490aec7f9550a8 196 SUPERFAMILY SSF48498 80 191 2.45E-21 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_5011 45537a1588a2fad542490aec7f9550a8 196 SUPERFAMILY SSF46689 3 75 1.28E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5011 45537a1588a2fad542490aec7f9550a8 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.7E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_5011 45537a1588a2fad542490aec7f9550a8 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.7E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_5011 45537a1588a2fad542490aec7f9550a8 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 7.9E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_5011 45537a1588a2fad542490aec7f9550a8 196 Pfam PF16925 Bacterial transcriptional repressor C-terminal 80 189 2.9E-18 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PA257_5011 45537a1588a2fad542490aec7f9550a8 196 Gene3D G3DSA:1.10.357.10 2 196 6.0E-51 T 12-10-2018 PA257_5150 90986d4614f56772e2d5f16fa8cd3363 84 SUPERFAMILY SSF109910 3 79 1.83E-24 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily PA257_5150 90986d4614f56772e2d5f16fa8cd3363 84 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 8.3E-25 T 12-10-2018 IPR005631 Flavinator of succinate dehydrogenase PA257_5150 90986d4614f56772e2d5f16fa8cd3363 84 Gene3D G3DSA:1.10.150.250 1 83 3.7E-30 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily PA257_2120 d62c6bdc6961cbeee6645913ffec0863 145 SUPERFAMILY SSF55811 3 142 2.84E-20 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_2120 d62c6bdc6961cbeee6645913ffec0863 145 Pfam PF00293 NUDIX domain 17 124 5.9E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_2120 d62c6bdc6961cbeee6645913ffec0863 145 Gene3D G3DSA:3.90.79.10 8 143 4.8E-17 T 12-10-2018 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 1.5E-23 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 SUPERFAMILY SSF54782 220 309 2.22E-28 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 Gene3D G3DSA:3.40.190.10 7 210 5.1E-83 T 12-10-2018 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.1E-110 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 PIRSF PIRSF001438 1 311 4.3E-119 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 SUPERFAMILY SSF53850 5 219 5.6E-83 T 12-10-2018 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 6.0E-77 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.028 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 Gene3D G3DSA:3.30.160.40 221 306 1.8E-29 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 Gene3D G3DSA:3.40.190.10 103 202 5.1E-83 T 12-10-2018 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 4.9E-51 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 4.9E-51 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 4.9E-51 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 4.9E-51 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 4.9E-51 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6615 6b41ab4790bc2d4b7a5c92b70c392e61 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_3107 8260b06d105dcb028742f46a1fd6a3b6 328 Gene3D G3DSA:2.60.120.1440 107 242 3.7E-15 T 12-10-2018 PA257_3107 8260b06d105dcb028742f46a1fd6a3b6 328 Pfam PF04773 FecR protein 117 213 3.9E-18 T 12-10-2018 IPR006860 FecR protein PA257_3107 8260b06d105dcb028742f46a1fd6a3b6 328 Pfam PF16220 Domain of unknown function (DUF4880) 14 56 9.7E-14 T 12-10-2018 IPR032623 FecR, N-terminal PA257_3107 8260b06d105dcb028742f46a1fd6a3b6 328 PIRSF PIRSF018266 4 328 1.3E-92 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_3998 52470094570ee1232651e4d111f75cb0 332 Gene3D G3DSA:1.20.58.340 275 332 2.9E-12 T 12-10-2018 PA257_3998 52470094570ee1232651e4d111f75cb0 332 Pfam PF01544 CorA-like Mg2+ transporter protein 41 328 1.9E-56 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PA257_3998 52470094570ee1232651e4d111f75cb0 332 Gene3D G3DSA:1.20.58.340 142 271 4.2E-32 T 12-10-2018 PA257_3998 52470094570ee1232651e4d111f75cb0 332 Gene3D G3DSA:3.30.460.20 4 141 8.9E-42 T 12-10-2018 PA257_3998 52470094570ee1232651e4d111f75cb0 332 SUPERFAMILY SSF144083 267 329 5.75E-16 T 12-10-2018 PA257_3998 52470094570ee1232651e4d111f75cb0 332 SUPERFAMILY SSF143865 9 260 2.88E-49 T 12-10-2018 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 SUPERFAMILY SSF52156 621 747 5.75E-34 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:3.30.56.50 2 51 1.4E-12 T 12-10-2018 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 343 499 2.7E-31 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:2.40.30.10 512 628 6.8E-40 T 12-10-2018 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 SUPERFAMILY SSF46955 3 51 5.86E-10 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:3.40.50.10050 634 740 2.2E-33 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 SUPERFAMILY SSF50447 742 838 2.75E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 SUPERFAMILY SSF52540 332 510 1.71E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:2.40.30.10 741 839 2.5E-32 T 12-10-2018 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:3.40.50.300 337 511 2.2E-70 T 12-10-2018 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 259 839 1.4E-263 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 838 17.305 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 SUPERFAMILY SSF50447 513 595 1.79E-26 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 265 315 1.9E-14 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 Pfam PF00009 Elongation factor Tu GTP binding domain 344 501 2.0E-34 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 ProSitePatterns PS01176 Initiation factor 2 signature. 791 813 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 Pfam PF11987 Translation-initiation factor 2 625 730 2.0E-34 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 PA257_5959 be549ce9d49b50a899bdd81d2f309ed6 840 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 95 2.5E-11 T 12-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial PA257_1297 a4f26d9bb6747b0810a110135b1940a3 174 Gene3D G3DSA:3.90.420.10 12 168 3.2E-14 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_1297 a4f26d9bb6747b0810a110135b1940a3 174 SUPERFAMILY SSF56524 21 168 5.1E-20 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_1297 a4f26d9bb6747b0810a110135b1940a3 174 Pfam PF00174 Oxidoreductase molybdopterin binding domain 23 165 4.1E-13 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PA257_6695 f01bde15287418f9c33519462185fcff 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_6695 f01bde15287418f9c33519462185fcff 497 Pfam PF00171 Aldehyde dehydrogenase family 32 492 2.0E-170 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_6695 f01bde15287418f9c33519462185fcff 497 Gene3D G3DSA:3.40.309.10 271 463 2.4E-177 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_6695 f01bde15287418f9c33519462185fcff 497 SUPERFAMILY SSF53720 17 496 8.51E-167 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_6695 f01bde15287418f9c33519462185fcff 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_6695 f01bde15287418f9c33519462185fcff 497 Gene3D G3DSA:3.40.605.10 24 491 2.4E-177 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_4095 7424785b954314c9798b04c623570107 327 Pfam PF12146 Serine aminopeptidase, S33 83 170 2.1E-10 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 PA257_4095 7424785b954314c9798b04c623570107 327 SUPERFAMILY SSF53474 29 296 9.64E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4095 7424785b954314c9798b04c623570107 327 Gene3D G3DSA:3.40.50.1820 29 290 1.0E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6768 894a4a8ebdea7199ed932a840f262df8 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_6768 894a4a8ebdea7199ed932a840f262df8 197 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 84 193 5.1E-35 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal PA257_6768 894a4a8ebdea7199ed932a840f262df8 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_6768 894a4a8ebdea7199ed932a840f262df8 197 SUPERFAMILY SSF46689 5 79 1.08E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6768 894a4a8ebdea7199ed932a840f262df8 197 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 1.5E-77 T 12-10-2018 IPR017757 Transcriptional repressor BetI PA257_6768 894a4a8ebdea7199ed932a840f262df8 197 Gene3D G3DSA:1.10.357.10 6 196 1.3E-42 T 12-10-2018 PA257_6768 894a4a8ebdea7199ed932a840f262df8 197 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 197 110.913 T 12-10-2018 IPR017757 Transcriptional repressor BetI PA257_6768 894a4a8ebdea7199ed932a840f262df8 197 SUPERFAMILY SSF48498 81 193 9.24E-24 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_5541 f17f36632cc67bee52ecc6915dbfccf4 174 Gene3D G3DSA:1.10.60.30 23 98 1.6E-30 T 12-10-2018 PA257_5541 f17f36632cc67bee52ecc6915dbfccf4 174 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 168 21.511 T 12-10-2018 IPR006839 Ribosome-associated, YjgA PA257_5541 f17f36632cc67bee52ecc6915dbfccf4 174 PIRSF PIRSF016183 1 172 1.2E-67 T 12-10-2018 IPR006839 Ribosome-associated, YjgA PA257_5541 f17f36632cc67bee52ecc6915dbfccf4 174 Pfam PF04751 Protein of unknown function (DUF615) 13 164 3.2E-55 T 12-10-2018 IPR006839 Ribosome-associated, YjgA PA257_5541 f17f36632cc67bee52ecc6915dbfccf4 174 Gene3D G3DSA:1.10.60.30 99 174 1.6E-33 T 12-10-2018 PA257_5541 f17f36632cc67bee52ecc6915dbfccf4 174 SUPERFAMILY SSF158710 24 166 3.27E-51 T 12-10-2018 IPR023153 PSPTO4464-like domain superfamily PA257_5568 38c2e99a34f36214cff635b7d4301965 187 SUPERFAMILY SSF51182 57 179 1.47E-27 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_5568 38c2e99a34f36214cff635b7d4301965 187 Gene3D G3DSA:2.60.120.10 88 176 7.4E-19 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_5568 38c2e99a34f36214cff635b7d4301965 187 Pfam PF07883 Cupin domain 109 175 8.2E-18 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_5568 38c2e99a34f36214cff635b7d4301965 187 SUPERFAMILY SSF47413 3 69 5.07E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_5568 38c2e99a34f36214cff635b7d4301965 187 Gene3D G3DSA:1.10.260.40 3 87 2.4E-13 T 12-10-2018 PA257_5568 38c2e99a34f36214cff635b7d4301965 187 SMART SM00530 9 64 3.1E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_5568 38c2e99a34f36214cff635b7d4301965 187 Pfam PF13560 Helix-turn-helix domain 5 61 2.6E-8 T 12-10-2018 PA257_6234 46c633bf861e7f7d8e0094dc66c1697e 180 Gene3D G3DSA:3.30.420.10 1 180 1.8E-75 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_6234 46c633bf861e7f7d8e0094dc66c1697e 180 SUPERFAMILY SSF53098 2 179 2.74E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_6234 46c633bf861e7f7d8e0094dc66c1697e 180 Hamap MF_00045 Oligoribonuclease [orn]. 2 180 44.191 T 12-10-2018 IPR022894 Oligoribonuclease GO:0000175 PA257_6234 46c633bf861e7f7d8e0094dc66c1697e 180 Pfam PF00929 Exonuclease 8 169 4.8E-34 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_6234 46c633bf861e7f7d8e0094dc66c1697e 180 SMART SM00479 6 179 1.1E-22 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_2899 bba3460195573b46dd77175b60dd2997 714 SMART SM00283 452 713 1.7E-81 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2899 bba3460195573b46dd77175b60dd2997 714 Pfam PF00672 HAMP domain 384 433 1.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2899 bba3460195573b46dd77175b60dd2997 714 Gene3D G3DSA:1.10.287.950 383 714 7.8E-79 T 12-10-2018 PA257_2899 bba3460195573b46dd77175b60dd2997 714 Pfam PF02743 Cache domain 90 333 1.6E-16 T 12-10-2018 IPR033479 Double Cache domain 1 PA257_2899 bba3460195573b46dd77175b60dd2997 714 Gene3D G3DSA:3.30.450.20 242 342 3.8E-38 T 12-10-2018 PA257_2899 bba3460195573b46dd77175b60dd2997 714 Gene3D G3DSA:3.30.450.20 105 241 3.8E-38 T 12-10-2018 PA257_2899 bba3460195573b46dd77175b60dd2997 714 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 525 681 1.9E-45 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_2899 bba3460195573b46dd77175b60dd2997 714 SUPERFAMILY SSF58104 405 713 2.88E-82 T 12-10-2018 PA257_2899 bba3460195573b46dd77175b60dd2997 714 SMART SM00304 383 437 1.1E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2116 f99f4195d0a1b90054d55a1a97105cde 285 Gene3D G3DSA:3.40.50.10490 95 272 2.5E-40 T 12-10-2018 PA257_2116 f99f4195d0a1b90054d55a1a97105cde 285 SUPERFAMILY SSF46689 1 78 2.51E-22 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2116 f99f4195d0a1b90054d55a1a97105cde 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 77 2.4E-31 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PA257_2116 f99f4195d0a1b90054d55a1a97105cde 285 Pfam PF01380 SIS domain 125 253 2.5E-21 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PA257_2116 f99f4195d0a1b90054d55a1a97105cde 285 SUPERFAMILY SSF53697 93 273 3.27E-39 T 12-10-2018 PA257_2116 f99f4195d0a1b90054d55a1a97105cde 285 Gene3D G3DSA:1.10.10.10 1 80 1.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4346 fc545aa330fc1afe2e79346775eb5e5e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.9E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PA257_4346 fc545aa330fc1afe2e79346775eb5e5e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.9E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PA257_4346 fc545aa330fc1afe2e79346775eb5e5e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.9E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PA257_4346 fc545aa330fc1afe2e79346775eb5e5e 89 PIRSF PIRSF004669 1 89 2.7E-30 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PA257_4346 fc545aa330fc1afe2e79346775eb5e5e 89 Pfam PF01313 Bacterial export proteins, family 3 6 78 3.5E-29 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PA257_4346 fc545aa330fc1afe2e79346775eb5e5e 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.9E-29 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 PA257_1168 b85a13a296c079260ce26af996460db5 511 Gene3D G3DSA:3.60.110.10 220 474 6.1E-16 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_1168 b85a13a296c079260ce26af996460db5 511 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 452 1.8E-97 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 PA257_1168 b85a13a296c079260ce26af996460db5 511 Pfam PF00795 Carbon-nitrogen hydrolase 231 467 1.1E-28 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PA257_1168 b85a13a296c079260ce26af996460db5 511 SUPERFAMILY SSF56317 221 484 7.59E-47 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_1168 b85a13a296c079260ce26af996460db5 511 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 489 22.918 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 PA257_2378 4c286c8428d2382284e4da3188c2a79a 177 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 42 1.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_2378 4c286c8428d2382284e4da3188c2a79a 177 Gene3D G3DSA:1.10.357.10 55 177 2.6E-33 T 12-10-2018 PA257_2378 4c286c8428d2382284e4da3188c2a79a 177 SUPERFAMILY SSF46689 2 66 1.95E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2378 4c286c8428d2382284e4da3188c2a79a 177 SUPERFAMILY SSF48498 62 177 3.62E-29 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_2378 4c286c8428d2382284e4da3188c2a79a 177 Gene3D G3DSA:1.10.10.60 1 50 2.2E-19 T 12-10-2018 PA257_5613 a37f5dd699708ecce5586905830e20dc 352 Gene3D G3DSA:3.40.50.300 15 183 1.2E-17 T 12-10-2018 PA257_5613 a37f5dd699708ecce5586905830e20dc 352 Pfam PF03969 AFG1-like ATPase 7 349 7.5E-137 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 PA257_5613 a37f5dd699708ecce5586905830e20dc 352 SUPERFAMILY SSF52540 43 170 3.41E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5134 ea856689010d94fc328e337dd9241272 252 SUPERFAMILY SSF53335 27 250 1.46E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5134 ea856689010d94fc328e337dd9241272 252 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 11 251 8.7E-87 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 PA257_5134 ea856689010d94fc328e337dd9241272 252 Pfam PF13649 Methyltransferase domain 68 168 9.2E-12 T 12-10-2018 PA257_5134 ea856689010d94fc328e337dd9241272 252 PIRSF PIRSF006325 7 252 8.8E-115 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 PA257_5134 ea856689010d94fc328e337dd9241272 252 Gene3D G3DSA:3.40.50.150 24 252 5.6E-54 T 12-10-2018 PA257_5134 ea856689010d94fc328e337dd9241272 252 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 9 252 40.533 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 PA257_2077 3e29310b879bf372de7bbfe5f80d6ea4 270 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 17 231 1.1E-13 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 PA257_2077 3e29310b879bf372de7bbfe5f80d6ea4 270 Gene3D G3DSA:3.60.21.10 14 259 7.4E-21 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like PA257_2077 3e29310b879bf372de7bbfe5f80d6ea4 270 SUPERFAMILY SSF56300 15 253 5.7E-33 T 12-10-2018 PA257_3665 95050583bd2f2283b89acf721504962d 387 Gene3D G3DSA:1.20.1250.20 189 381 3.6E-36 T 12-10-2018 PA257_3665 95050583bd2f2283b89acf721504962d 387 Pfam PF12832 MFS_1 like family 8 347 1.6E-38 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain PA257_3665 95050583bd2f2283b89acf721504962d 387 SUPERFAMILY SSF103473 2 374 8.37E-43 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3665 95050583bd2f2283b89acf721504962d 387 PIRSF PIRSF004925 1 384 6.9E-116 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter PA257_3665 95050583bd2f2283b89acf721504962d 387 Gene3D G3DSA:1.20.1250.20 1 176 1.5E-19 T 12-10-2018 PA257_2221 f1789a504053a3e88cd6b5186fae97de 455 Pfam PF07044 Protein of unknown function (DUF1329) 84 450 5.1E-162 T 12-10-2018 IPR010752 Protein of unknown function DUF1329 PA257_0760 e111efa53f9e8216c84f56015f8695d1 256 SUPERFAMILY SSF47413 10 74 9.98E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_0760 e111efa53f9e8216c84f56015f8695d1 256 SUPERFAMILY SSF51306 109 243 1.57E-21 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_0760 e111efa53f9e8216c84f56015f8695d1 256 Pfam PF01381 Helix-turn-helix 16 69 3.2E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_0760 e111efa53f9e8216c84f56015f8695d1 256 Pfam PF00717 Peptidase S24-like 159 224 3.8E-11 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_0760 e111efa53f9e8216c84f56015f8695d1 256 SMART SM00530 15 69 2.0E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_0760 e111efa53f9e8216c84f56015f8695d1 256 Gene3D G3DSA:1.10.260.40 10 78 1.2E-22 T 12-10-2018 PA257_0760 e111efa53f9e8216c84f56015f8695d1 256 Gene3D G3DSA:2.10.109.10 118 245 1.9E-7 T 12-10-2018 PA257_2480 053fbe6d848da978ed2a37df978b4dcb 479 SUPERFAMILY SSF56954 4 472 2.62E-113 T 12-10-2018 PA257_2480 053fbe6d848da978ed2a37df978b4dcb 479 Gene3D G3DSA:2.20.200.10 101 358 9.8E-142 T 12-10-2018 PA257_2480 053fbe6d848da978ed2a37df978b4dcb 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 469 2.2E-119 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_2480 053fbe6d848da978ed2a37df978b4dcb 479 Gene3D G3DSA:1.20.1600.10 54 470 9.8E-142 T 12-10-2018 PA257_2480 053fbe6d848da978ed2a37df978b4dcb 479 Pfam PF02321 Outer membrane efflux protein 64 257 2.4E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_2480 053fbe6d848da978ed2a37df978b4dcb 479 Pfam PF02321 Outer membrane efflux protein 286 467 9.1E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_4998 075773a1a668ba4c53d2d6f7068f1d36 320 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 56 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PA257_4998 075773a1a668ba4c53d2d6f7068f1d36 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 304 1.9E-64 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_4998 075773a1a668ba4c53d2d6f7068f1d36 320 Gene3D G3DSA:3.40.50.1100 51 148 1.6E-75 T 12-10-2018 PA257_4998 075773a1a668ba4c53d2d6f7068f1d36 320 SUPERFAMILY SSF53686 8 312 5.89E-74 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_4998 075773a1a668ba4c53d2d6f7068f1d36 320 Gene3D G3DSA:3.40.50.1100 18 308 1.6E-75 T 12-10-2018 PA257_4998 075773a1a668ba4c53d2d6f7068f1d36 320 PIRSF PIRSF006278 2 229 1.3E-7 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase PA257_4998 075773a1a668ba4c53d2d6f7068f1d36 320 PIRSF PIRSF006278 256 308 66.0 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase PA257_5328 2b1a9cd42d53e89bc1e75f950e574e2c 173 Pfam PF08281 Sigma-70, region 4 101 153 1.1E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_5328 2b1a9cd42d53e89bc1e75f950e574e2c 173 Gene3D G3DSA:1.10.10.10 84 164 2.6E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5328 2b1a9cd42d53e89bc1e75f950e574e2c 173 Pfam PF04542 Sigma-70 region 2 9 65 2.3E-4 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_5328 2b1a9cd42d53e89bc1e75f950e574e2c 173 SUPERFAMILY SSF88659 84 162 1.53E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_5328 2b1a9cd42d53e89bc1e75f950e574e2c 173 SUPERFAMILY SSF88946 4 64 1.41E-7 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_5328 2b1a9cd42d53e89bc1e75f950e574e2c 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 151 8.9E-18 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 SMART SM00836 581 684 0.0032 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 684 5.2E-245 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 SUPERFAMILY SSF109604 335 486 2.04E-17 T 12-10-2018 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 546 5.3E-206 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 684 25.492 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 2.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 314 330 2.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 390 409 2.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 51 63 2.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 2.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PA257_0018 ef616e768ab34e07fb8d67a5823795dd 685 Pfam PF05746 DALR anticodon binding domain 578 672 1.1E-6 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PA257_4289 ae87a6d60f309e2f81e258e78e5e214b 216 SUPERFAMILY SSF48498 76 200 6.43E-43 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_4289 ae87a6d60f309e2f81e258e78e5e214b 216 Pfam PF08362 YcdC-like protein, C-terminal region 59 200 9.1E-62 T 12-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PA257_4289 ae87a6d60f309e2f81e258e78e5e214b 216 Gene3D G3DSA:1.10.10.60 7 58 1.3E-19 T 12-10-2018 PA257_4289 ae87a6d60f309e2f81e258e78e5e214b 216 SUPERFAMILY SSF46689 3 80 1.03E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4289 ae87a6d60f309e2f81e258e78e5e214b 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 1.3E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4289 ae87a6d60f309e2f81e258e78e5e214b 216 Gene3D G3DSA:1.10.357.10 59 200 7.7E-52 T 12-10-2018 PA257_4289 ae87a6d60f309e2f81e258e78e5e214b 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.2E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4289 ae87a6d60f309e2f81e258e78e5e214b 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.2E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0915 560c02b2b5eaf2e4bc481462d829771a 247 Gene3D G3DSA:2.20.130.10 147 206 2.9E-40 T 12-10-2018 PA257_0915 560c02b2b5eaf2e4bc481462d829771a 247 SUPERFAMILY SSF53335 6 246 7.49E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0915 560c02b2b5eaf2e4bc481462d829771a 247 Pfam PF13649 Methyltransferase domain 45 135 1.8E-11 T 12-10-2018 PA257_0915 560c02b2b5eaf2e4bc481462d829771a 247 Gene3D G3DSA:3.40.50.150 12 216 2.9E-40 T 12-10-2018 PA257_3309 19292a3ea69ed996a0a0b53fdc2d8513 301 SUPERFAMILY SSF46689 251 299 1.97E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3309 19292a3ea69ed996a0a0b53fdc2d8513 301 Pfam PF12833 Helix-turn-helix domain 221 298 2.7E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3309 19292a3ea69ed996a0a0b53fdc2d8513 301 Pfam PF12852 Cupin 11 182 1.9E-30 T 12-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain PA257_3309 19292a3ea69ed996a0a0b53fdc2d8513 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 2.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_3309 19292a3ea69ed996a0a0b53fdc2d8513 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 2.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_3309 19292a3ea69ed996a0a0b53fdc2d8513 301 Gene3D G3DSA:1.10.10.60 201 301 3.5E-25 T 12-10-2018 PA257_3309 19292a3ea69ed996a0a0b53fdc2d8513 301 SUPERFAMILY SSF46689 201 246 1.97E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3309 19292a3ea69ed996a0a0b53fdc2d8513 301 SMART SM00342 215 297 3.8E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_6421 3267b9739b18c5a9b84a12c3c68e887c 163 SUPERFAMILY SSF54611 8 148 7.19E-53 T 12-10-2018 IPR035958 SecB-like superfamily PA257_6421 3267b9739b18c5a9b84a12c3c68e887c 163 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 147 1.6E-54 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PA257_6421 3267b9739b18c5a9b84a12c3c68e887c 163 Gene3D G3DSA:3.10.420.10 1 159 4.8E-58 T 12-10-2018 IPR035958 SecB-like superfamily PA257_6421 3267b9739b18c5a9b84a12c3c68e887c 163 Pfam PF02556 Preprotein translocase subunit SecB 11 150 2.7E-54 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PA257_6421 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 80 100 5.6E-37 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PA257_6421 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 19 36 5.6E-37 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PA257_6421 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 130 148 5.6E-37 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PA257_6421 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 104 126 5.6E-37 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PA257_6421 3267b9739b18c5a9b84a12c3c68e887c 163 Hamap MF_00821 Protein-export protein SecB [secB]. 1 152 33.454 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PA257_4828 76c2e8539c8f842db718ff4ba138110a 348 Gene3D G3DSA:3.40.47.10 191 348 1.8E-42 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4828 76c2e8539c8f842db718ff4ba138110a 348 SUPERFAMILY SSF53901 7 342 2.46E-41 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4828 76c2e8539c8f842db718ff4ba138110a 348 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 341 7.4E-21 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_4828 76c2e8539c8f842db718ff4ba138110a 348 Gene3D G3DSA:3.40.47.10 1 190 1.3E-64 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4828 76c2e8539c8f842db718ff4ba138110a 348 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 124 200 1.8E-18 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_5981 fac32f43330c6852693f3f423d43af3c 558 SUPERFAMILY SSF52540 1 217 3.12E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5981 fac32f43330c6852693f3f423d43af3c 558 SUPERFAMILY SSF52540 2 511 1.94E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5981 fac32f43330c6852693f3f423d43af3c 558 Pfam PF02463 RecF/RecN/SMC N terminal domain 8 510 1.5E-15 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal PA257_5981 fac32f43330c6852693f3f423d43af3c 558 Gene3D G3DSA:3.40.50.300 1 258 1.9E-46 T 12-10-2018 PA257_5981 fac32f43330c6852693f3f423d43af3c 558 Gene3D G3DSA:3.40.50.300 264 553 8.0E-54 T 12-10-2018 PA257_5981 fac32f43330c6852693f3f423d43af3c 558 PIRSF PIRSF003128 1 558 9.5E-160 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PA257_5981 fac32f43330c6852693f3f423d43af3c 558 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 9.7E-157 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PA257_1819 d33c5f853a98c19a2c517e2e710215af 523 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 27 511 2.0E-217 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 PA257_1819 d33c5f853a98c19a2c517e2e710215af 523 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 23 514 54.997 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 PA257_1819 d33c5f853a98c19a2c517e2e710215af 523 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 27 514 3.8E-243 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 PA257_1819 d33c5f853a98c19a2c517e2e710215af 523 SUPERFAMILY SSF51905 24 354 7.29E-25 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5719 60a671e5e7f5576559c89ca1f1605198 317 Pfam PF01479 S4 domain 15 60 5.2E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_5719 60a671e5e7f5576559c89ca1f1605198 317 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 131 145 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5719 60a671e5e7f5576559c89ca1f1605198 317 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 308 1.3E-95 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5719 60a671e5e7f5576559c89ca1f1605198 317 Gene3D G3DSA:3.10.290.10 1 70 2.8E-15 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PA257_5719 60a671e5e7f5576559c89ca1f1605198 317 Pfam PF00849 RNA pseudouridylate synthase 88 238 2.9E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5719 60a671e5e7f5576559c89ca1f1605198 317 SUPERFAMILY SSF55120 72 311 9.89E-81 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5719 60a671e5e7f5576559c89ca1f1605198 317 Gene3D G3DSA:3.30.2350.10 80 312 2.3E-73 T 12-10-2018 PA257_5719 60a671e5e7f5576559c89ca1f1605198 317 SUPERFAMILY SSF55174 14 101 8.24E-8 T 12-10-2018 PA257_2001 581341d1dd0f723cacb89f99c8c4d599 284 Hamap MF_00697 UPF0276 protein . 9 277 45.304 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 PA257_2001 581341d1dd0f723cacb89f99c8c4d599 284 Gene3D G3DSA:3.20.20.150 5 281 6.4E-84 T 12-10-2018 PA257_2001 581341d1dd0f723cacb89f99c8c4d599 284 SUPERFAMILY SSF51658 29 212 2.63E-8 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily PA257_2001 581341d1dd0f723cacb89f99c8c4d599 284 Pfam PF05114 Protein of unknown function (DUF692) 8 269 1.8E-97 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 PA257_5348 512bee9b822b933ccc48ab157463449c 296 SUPERFAMILY SSF103481 36 138 2.09E-10 T 12-10-2018 PA257_5348 512bee9b822b933ccc48ab157463449c 296 SUPERFAMILY SSF103481 185 286 7.59E-15 T 12-10-2018 PA257_5348 512bee9b822b933ccc48ab157463449c 296 Pfam PF00892 EamA-like transporter family 3 135 2.2E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_5348 512bee9b822b933ccc48ab157463449c 296 Pfam PF00892 EamA-like transporter family 150 281 1.4E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_6842 67085dc386538c302a490c08e3b375ca 728 Pfam PF13361 UvrD-like helicase C-terminal domain 279 618 2.2E-75 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PA257_6842 67085dc386538c302a490c08e3b375ca 728 Gene3D G3DSA:1.10.10.160 116 189 3.6E-99 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily PA257_6842 67085dc386538c302a490c08e3b375ca 728 Gene3D G3DSA:3.40.50.300 283 638 2.3E-130 T 12-10-2018 PA257_6842 67085dc386538c302a490c08e3b375ca 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 8 726 0.0 T 12-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 PA257_6842 67085dc386538c302a490c08e3b375ca 728 Gene3D G3DSA:1.10.486.10 384 540 2.3E-130 T 12-10-2018 PA257_6842 67085dc386538c302a490c08e3b375ca 728 SUPERFAMILY SSF52540 9 644 3.46E-184 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6842 67085dc386538c302a490c08e3b375ca 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 273 6.4E-74 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PA257_6842 67085dc386538c302a490c08e3b375ca 728 Gene3D G3DSA:3.40.50.300 12 275 3.6E-99 T 12-10-2018 PA257_1075 40d40a9db277e99d9b2822b808fd12c3 495 Gene3D G3DSA:3.40.309.10 271 460 1.7E-188 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_1075 40d40a9db277e99d9b2822b808fd12c3 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_1075 40d40a9db277e99d9b2822b808fd12c3 495 Pfam PF00171 Aldehyde dehydrogenase family 32 491 3.0E-174 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_1075 40d40a9db277e99d9b2822b808fd12c3 495 Gene3D G3DSA:3.40.605.10 31 489 1.7E-188 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_1075 40d40a9db277e99d9b2822b808fd12c3 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_1075 40d40a9db277e99d9b2822b808fd12c3 495 SUPERFAMILY SSF53720 13 493 8.64E-171 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_6141 9276e0e62ff7e87b809df28c28ea7665 280 Pfam PF01774 UreD urease accessory protein 57 253 2.7E-49 T 12-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 PA257_6141 9276e0e62ff7e87b809df28c28ea7665 280 Hamap MF_01384 Urease accessory protein UreD [ureD]. 14 264 28.387 T 12-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 PA257_1885 9d92da61c9573aa673abe3e7a4de2277 231 SUPERFAMILY SSF118196 2 218 8.89E-77 T 12-10-2018 IPR036413 YaeB-like superfamily PA257_1885 9d92da61c9573aa673abe3e7a4de2277 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 4 143 1.5E-44 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain PA257_1885 9d92da61c9573aa673abe3e7a4de2277 231 Gene3D G3DSA:2.40.30.70 1 136 8.0E-46 T 12-10-2018 IPR036414 YaeB, N-terminal domain superfamily PA257_1885 9d92da61c9573aa673abe3e7a4de2277 231 ProSitePatterns PS01318 TsaA-like domain signature. 86 97 - T 12-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site PA257_1885 9d92da61c9573aa673abe3e7a4de2277 231 Gene3D G3DSA:3.30.2310.10 137 224 8.6E-18 T 12-10-2018 PA257_1885 9d92da61c9573aa673abe3e7a4de2277 231 Pfam PF01980 Uncharacterised protein family UPF0066 20 138 1.5E-41 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain PA257_6210 5aa69b5b4b1dbdd270e7616f7e16c2a9 513 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 399 407 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site PA257_6210 5aa69b5b4b1dbdd270e7616f7e16c2a9 513 SUPERFAMILY SSF51445 45 499 3.63E-126 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_6210 5aa69b5b4b1dbdd270e7616f7e16c2a9 513 PRINTS PR00131 Glycosyl hydrolase family 1 signature 443 460 2.0E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PA257_6210 5aa69b5b4b1dbdd270e7616f7e16c2a9 513 PRINTS PR00131 Glycosyl hydrolase family 1 signature 422 433 2.0E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PA257_6210 5aa69b5b4b1dbdd270e7616f7e16c2a9 513 PRINTS PR00131 Glycosyl hydrolase family 1 signature 467 479 2.0E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PA257_6210 5aa69b5b4b1dbdd270e7616f7e16c2a9 513 PRINTS PR00131 Glycosyl hydrolase family 1 signature 338 352 2.0E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PA257_6210 5aa69b5b4b1dbdd270e7616f7e16c2a9 513 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 407 2.0E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PA257_6210 5aa69b5b4b1dbdd270e7616f7e16c2a9 513 Pfam PF00232 Glycosyl hydrolase family 1 46 496 4.5E-120 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PA257_6210 5aa69b5b4b1dbdd270e7616f7e16c2a9 513 Gene3D G3DSA:3.20.20.80 33 507 1.0E-139 T 12-10-2018 PA257_6210 5aa69b5b4b1dbdd270e7616f7e16c2a9 513 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 47 61 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 SMART SM00464 6 198 5.2E-73 T 12-10-2018 IPR003111 Lon, substrate-binding domain PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 698 717 2.5E-54 T 12-10-2018 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 590 606 2.5E-54 T 12-10-2018 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 721 739 2.5E-54 T 12-10-2018 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 371 2.5E-54 T 12-10-2018 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 668 687 2.5E-54 T 12-10-2018 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 TIGRFAM TIGR00763 lon: endopeptidase La 8 766 3.3E-302 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 197 1.1E-41 T 12-10-2018 IPR003111 Lon, substrate-binding domain PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 565 767 1.1E-97 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 Gene3D G3DSA:3.30.230.10 580 767 4.0E-81 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 SUPERFAMILY SSF52540 309 581 6.88E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 Gene3D G3DSA:1.20.58.1480 116 241 6.4E-44 T 12-10-2018 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 SUPERFAMILY SSF54211 590 765 4.55E-58 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 SMART SM00382 344 488 9.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 SUPERFAMILY SSF88697 6 197 4.72E-49 T 12-10-2018 IPR015947 PUA-like superfamily PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 Hamap MF_01973 Lon protease [lon]. 7 767 71.453 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 Gene3D G3DSA:2.30.130.40 3 113 1.1E-33 T 12-10-2018 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 Gene3D G3DSA:1.10.8.60 487 579 1.5E-31 T 12-10-2018 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 PIRSF PIRSF001174 1 770 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 Gene3D G3DSA:3.40.50.300 309 486 7.5E-64 T 12-10-2018 PA257_3957 e3b82f29519787baf8b24a3ad64e9b26 798 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 348 484 9.3E-19 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_0086 c7c21e281c74ef01a575645d552f9853 681 SUPERFAMILY SSF55486 4 675 2.2E-208 T 12-10-2018 PA257_0086 c7c21e281c74ef01a575645d552f9853 681 Pfam PF01432 Peptidase family M3 224 675 1.6E-150 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 PA257_0086 c7c21e281c74ef01a575645d552f9853 681 Gene3D G3DSA:1.10.1370.40 14 673 6.7E-269 T 12-10-2018 PA257_0086 c7c21e281c74ef01a575645d552f9853 681 Gene3D G3DSA:1.10.1370.10 142 608 6.7E-269 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PA257_4135 fbc920b249939c9e6ee683058abfeb91 652 Gene3D G3DSA:1.10.287.950 323 652 2.1E-78 T 12-10-2018 PA257_4135 fbc920b249939c9e6ee683058abfeb91 652 Pfam PF00672 HAMP domain 325 371 4.8E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4135 fbc920b249939c9e6ee683058abfeb91 652 SMART SM00283 390 651 1.7E-84 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_4135 fbc920b249939c9e6ee683058abfeb91 652 SUPERFAMILY SSF58104 343 652 6.02E-79 T 12-10-2018 PA257_4135 fbc920b249939c9e6ee683058abfeb91 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 618 7.7E-45 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_4135 fbc920b249939c9e6ee683058abfeb91 652 SMART SM01358 37 301 1.2E-38 T 12-10-2018 IPR032255 Helical bimodular sensor domain PA257_4135 fbc920b249939c9e6ee683058abfeb91 652 SMART SM00304 323 375 1.4E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4135 fbc920b249939c9e6ee683058abfeb91 652 SMART SM00304 376 428 22.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_1003 fa73ce4dcb931f61f159de1aa893fe2e 557 PIRSF PIRSF007056 20 553 1.2E-226 T 12-10-2018 IPR012036 Bacteriophage Mu, Gp28 PA257_1003 fa73ce4dcb931f61f159de1aa893fe2e 557 Gene3D G3DSA:3.40.50.300 42 234 1.7E-31 T 12-10-2018 PA257_1003 fa73ce4dcb931f61f159de1aa893fe2e 557 Gene3D G3DSA:3.30.420.240 341 520 7.7E-7 T 12-10-2018 PA257_4943 89abb3e4590e02999903ff9e9012f08e 334 SUPERFAMILY SSF53383 4 332 2.04E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_4943 89abb3e4590e02999903ff9e9012f08e 334 PIRSF PIRSF017617 1 334 4.7E-133 T 12-10-2018 IPR023603 Threonine aldolase PA257_4943 89abb3e4590e02999903ff9e9012f08e 334 Pfam PF01212 Beta-eliminating lyase 5 283 4.0E-95 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 PA257_4943 89abb3e4590e02999903ff9e9012f08e 334 Gene3D G3DSA:3.40.640.10 1 246 1.1E-96 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_4943 89abb3e4590e02999903ff9e9012f08e 334 Gene3D G3DSA:3.90.1150.10 247 333 5.7E-28 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_4591 b3f188e03da9d64a775900095be85596 492 Pfam PF00501 AMP-binding enzyme 21 394 5.3E-54 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_4591 b3f188e03da9d64a775900095be85596 492 SUPERFAMILY SSF56801 11 487 4.06E-89 T 12-10-2018 PA257_4591 b3f188e03da9d64a775900095be85596 492 Gene3D G3DSA:3.30.300.30 391 492 6.9E-9 T 12-10-2018 PA257_4591 b3f188e03da9d64a775900095be85596 492 Gene3D G3DSA:3.40.50.12780 6 388 3.3E-66 T 12-10-2018 PA257_4591 b3f188e03da9d64a775900095be85596 492 ProSitePatterns PS00455 Putative AMP-binding domain signature. 147 158 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3411 9cc84d93739a9790cc5bd9d48a9b7e0a 395 Pfam PF00534 Glycosyl transferases group 1 192 365 1.4E-14 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_3411 9cc84d93739a9790cc5bd9d48a9b7e0a 395 SUPERFAMILY SSF53756 8 389 1.26E-34 T 12-10-2018 PA257_3411 9cc84d93739a9790cc5bd9d48a9b7e0a 395 Gene3D G3DSA:3.40.50.2000 176 369 8.9E-26 T 12-10-2018 PA257_3411 9cc84d93739a9790cc5bd9d48a9b7e0a 395 Gene3D G3DSA:3.40.50.2000 57 384 8.9E-26 T 12-10-2018 PA257_4329 42e3911d656a96874d25cf873e6b0112 159 SMART SM00260 11 148 5.6E-53 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_4329 42e3911d656a96874d25cf873e6b0112 159 Gene3D G3DSA:2.40.50.180 34 143 1.7E-44 T 12-10-2018 PA257_4329 42e3911d656a96874d25cf873e6b0112 159 Gene3D G3DSA:2.30.30.40 17 142 1.7E-44 T 12-10-2018 PA257_4329 42e3911d656a96874d25cf873e6b0112 159 SUPERFAMILY SSF50341 11 154 2.88E-42 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_4329 42e3911d656a96874d25cf873e6b0112 159 Pfam PF01584 CheW-like domain 15 151 7.2E-40 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_0464 c4207e35884fa1525f9cc0b9c247289a 139 Gene3D G3DSA:2.60.40.3340 14 139 7.1E-42 T 12-10-2018 PA257_0464 c4207e35884fa1525f9cc0b9c247289a 139 Pfam PF14467 Domain of unknown function (DUF4426) 23 138 1.1E-40 T 12-10-2018 IPR025218 Domain of unknown function DUF4426 PA257_1492 ccc6a8d218169282b3d1dd0beb922712 1746 Gene3D G3DSA:3.40.50.300 1285 1439 9.6E-12 T 12-10-2018 PA257_1492 ccc6a8d218169282b3d1dd0beb922712 1746 SUPERFAMILY SSF52540 1280 1437 4.97E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1492 ccc6a8d218169282b3d1dd0beb922712 1746 Pfam PF07728 AAA domain (dynein-related subfamily) 1292 1415 5.6E-5 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PA257_1492 ccc6a8d218169282b3d1dd0beb922712 1746 Pfam PF12458 ATPase involved in DNA repair 38 485 2.2E-199 T 12-10-2018 IPR020958 Domain of unknown function DUF3686 PA257_4818 536e991b24dfdb64bc3a2e11390d4714 157 PIRSF PIRSF000239 1 155 8.3E-29 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_4818 536e991b24dfdb64bc3a2e11390d4714 157 Pfam PF00578 AhpC/TSA family 5 133 3.5E-36 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PA257_4818 536e991b24dfdb64bc3a2e11390d4714 157 SUPERFAMILY SSF52833 3 154 4.56E-51 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4818 536e991b24dfdb64bc3a2e11390d4714 157 Gene3D G3DSA:3.40.30.10 3 154 4.2E-48 T 12-10-2018 PA257_5771 38dce686af1a87e027ab657bdf2231fb 486 SUPERFAMILY SSF56954 3 477 3.01E-63 T 12-10-2018 PA257_5771 38dce686af1a87e027ab657bdf2231fb 486 Pfam PF02321 Outer membrane efflux protein 287 473 4.6E-23 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_5771 38dce686af1a87e027ab657bdf2231fb 486 Pfam PF02321 Outer membrane efflux protein 44 263 1.3E-17 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_5771 38dce686af1a87e027ab657bdf2231fb 486 Gene3D G3DSA:1.20.1600.10 36 477 5.1E-76 T 12-10-2018 PA257_3708 27a2ef86375e839c0b6495596dfc3c33 99 SUPERFAMILY SSF46785 9 91 1.57E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3708 27a2ef86375e839c0b6495596dfc3c33 99 Gene3D G3DSA:1.10.10.10 1 99 1.9E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3708 27a2ef86375e839c0b6495596dfc3c33 99 PIRSF PIRSF037266 1 97 5.7E-45 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 PA257_3708 27a2ef86375e839c0b6495596dfc3c33 99 Pfam PF09904 Winged helix-turn helix 5 94 2.3E-39 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 PA257_4388 a85402d791005222b1fd53b2cf7a93f2 313 Gene3D G3DSA:3.40.50.150 82 282 3.7E-43 T 12-10-2018 PA257_4388 a85402d791005222b1fd53b2cf7a93f2 313 SUPERFAMILY SSF53335 4 287 8.52E-54 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_4388 a85402d791005222b1fd53b2cf7a93f2 313 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 4.9E-169 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PA257_3703 f9ffd4b2c246938dcea43f755ac6b982 318 SUPERFAMILY SSF63380 21 144 4.31E-11 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_3703 f9ffd4b2c246938dcea43f755ac6b982 318 Gene3D G3DSA:2.40.30.10 11 145 5.3E-35 T 12-10-2018 PA257_3703 f9ffd4b2c246938dcea43f755ac6b982 318 Gene3D G3DSA:3.40.50.80 261 318 4.7E-13 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_3703 f9ffd4b2c246938dcea43f755ac6b982 318 Gene3D G3DSA:3.40.50.80 158 260 1.1E-18 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_3703 f9ffd4b2c246938dcea43f755ac6b982 318 Pfam PF04954 Siderophore-interacting protein 162 314 6.0E-38 T 12-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain PA257_3703 f9ffd4b2c246938dcea43f755ac6b982 318 Pfam PF08021 Siderophore-interacting FAD-binding domain 29 145 1.1E-39 T 12-10-2018 IPR013113 FAD-binding 9, siderophore-interacting PA257_4546 f11c6503cc065ae5a51ecd17f187e809 526 Gene3D G3DSA:3.40.309.10 266 453 6.4E-199 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_4546 f11c6503cc065ae5a51ecd17f187e809 526 Pfam PF00171 Aldehyde dehydrogenase family 37 454 1.6E-46 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_4546 f11c6503cc065ae5a51ecd17f187e809 526 SUPERFAMILY SSF53720 24 516 2.09E-97 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_4546 f11c6503cc065ae5a51ecd17f187e809 526 Gene3D G3DSA:3.40.605.10 44 518 6.4E-199 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_4403 27e6f131125e8b022e95f0ef93073190 196 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 11 190 6.4E-69 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PA257_4403 27e6f131125e8b022e95f0ef93073190 196 SUPERFAMILY SSF52540 19 191 6.04E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4403 27e6f131125e8b022e95f0ef93073190 196 Pfam PF01583 Adenylylsulphate kinase 23 176 5.1E-67 T 12-10-2018 PA257_4403 27e6f131125e8b022e95f0ef93073190 196 Gene3D G3DSA:3.40.50.300 5 195 4.0E-74 T 12-10-2018 PA257_4403 27e6f131125e8b022e95f0ef93073190 196 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 22 194 36.037 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PA257_0799 d9873da26acb9bcf821edef773bb474a 137 Pfam PF04519 Polymer-forming cytoskeletal 19 116 6.3E-25 T 12-10-2018 IPR007607 Bactofilin A/B PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 SUPERFAMILY SSF117892 52 185 3.53E-43 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 SMART SM00244 21 178 4.5E-63 T 12-10-2018 IPR001107 Band 7 domain PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 PRINTS PR00721 Stomatin signature 198 221 1.7E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 PRINTS PR00721 Stomatin signature 154 172 1.7E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 PRINTS PR00721 Stomatin signature 28 50 1.7E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 PRINTS PR00721 Stomatin signature 110 127 1.7E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 PRINTS PR00721 Stomatin signature 173 194 1.7E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 PRINTS PR00721 Stomatin signature 75 96 1.7E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 PRINTS PR00721 Stomatin signature 130 153 1.7E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 Pfam PF01145 SPFH domain / Band 7 family 26 194 2.0E-34 T 12-10-2018 IPR001107 Band 7 domain PA257_0590 4977ebb1162d2281b1c98c263adff53e 264 Gene3D G3DSA:3.30.479.30 49 180 2.6E-47 T 12-10-2018 PA257_3026 ba979036c0c01606aa5fa30e844fe896 550 Gene3D G3DSA:3.10.20.310 1 73 3.8E-8 T 12-10-2018 PA257_3026 ba979036c0c01606aa5fa30e844fe896 550 Pfam PF17243 POTRA domain TamA domain 1 1 72 2.2E-18 T 12-10-2018 IPR035243 TamA, POTRA domain 1 PA257_3026 ba979036c0c01606aa5fa30e844fe896 550 Gene3D G3DSA:2.40.160.50 242 550 3.0E-99 T 12-10-2018 PA257_3026 ba979036c0c01606aa5fa30e844fe896 550 Gene3D G3DSA:3.10.20.310 74 160 5.7E-17 T 12-10-2018 PA257_3026 ba979036c0c01606aa5fa30e844fe896 550 Gene3D G3DSA:3.10.20.310 161 241 7.5E-21 T 12-10-2018 PA257_3026 ba979036c0c01606aa5fa30e844fe896 550 Pfam PF01103 Surface antigen 364 547 2.3E-32 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 PA257_3026 ba979036c0c01606aa5fa30e844fe896 550 Pfam PF07244 Surface antigen variable number repeat 161 220 6.8E-9 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PA257_6395 281dc473001562e8406a76f5c5cf1288 196 Gene3D G3DSA:2.60.120.10 22 115 4.6E-79 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_6395 281dc473001562e8406a76f5c5cf1288 196 SUPERFAMILY SSF51182 4 190 1.2E-57 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_6395 281dc473001562e8406a76f5c5cf1288 196 Pfam PF05962 HutD 11 173 3.9E-55 T 12-10-2018 IPR010282 Uncharacterised protein family HutD/Ves PA257_6395 281dc473001562e8406a76f5c5cf1288 196 Gene3D G3DSA:2.60.120.10 116 193 4.6E-79 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_5695 96918db7e77d13ba12bbdf77207e69aa 219 Pfam PF11444 Protein of unknown function (DUF2895) 7 204 3.5E-80 T 12-10-2018 IPR021548 Protein of unknown function DUF2895 PA257_5695 96918db7e77d13ba12bbdf77207e69aa 219 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 3 205 6.0E-95 T 12-10-2018 IPR021548 Protein of unknown function DUF2895 PA257_4140 1e4f24254ce16f88d0a55cc62d5ca431 344 Gene3D G3DSA:3.30.1330.10 1 160 7.9E-48 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PA257_4140 1e4f24254ce16f88d0a55cc62d5ca431 344 Hamap MF_00625 Selenide, water dikinase [selD]. 4 344 44.911 T 12-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PA257_4140 1e4f24254ce16f88d0a55cc62d5ca431 344 SUPERFAMILY SSF55326 6 158 1.7E-38 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PA257_4140 1e4f24254ce16f88d0a55cc62d5ca431 344 Gene3D G3DSA:3.90.650.10 163 343 2.4E-52 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PA257_4140 1e4f24254ce16f88d0a55cc62d5ca431 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 168 343 6.6E-33 T 12-10-2018 IPR010918 PurM-like, C-terminal domain PA257_4140 1e4f24254ce16f88d0a55cc62d5ca431 344 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 311 3.4E-134 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PA257_4140 1e4f24254ce16f88d0a55cc62d5ca431 344 PIRSF PIRSF036407 1 344 4.1E-113 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PA257_4140 1e4f24254ce16f88d0a55cc62d5ca431 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 156 1.7E-19 T 12-10-2018 IPR016188 PurM-like, N-terminal domain PA257_4140 1e4f24254ce16f88d0a55cc62d5ca431 344 SUPERFAMILY SSF56042 163 339 3.59E-50 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 Gene3D G3DSA:1.10.8.540 513 600 7.0E-23 T 12-10-2018 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 12-10-2018 IPR025505 FHIPEP conserved site PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 Pfam PF00771 FHIPEP family 31 696 2.2E-267 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 704 4.3E-261 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 Gene3D G3DSA:1.10.490.80 604 704 7.8E-12 T 12-10-2018 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 1.5E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 1.5E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 1.5E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 1.5E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 1.5E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 1.5E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 PIRSF PIRSF005419 7 707 1.1E-248 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PA257_4341 568e3e52fe935e2cea711c9c8910f812 707 Gene3D G3DSA:3.40.30.60 370 512 3.8E-53 T 12-10-2018 PA257_0922 84df2f8e03ed5bbf8026774feed7ce18 187 SUPERFAMILY SSF52317 7 183 6.07E-44 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_0922 84df2f8e03ed5bbf8026774feed7ce18 187 Gene3D G3DSA:3.40.50.880 1 186 1.2E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_0922 84df2f8e03ed5bbf8026774feed7ce18 187 Pfam PF01965 DJ-1/PfpI family 8 180 1.4E-39 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_0922 84df2f8e03ed5bbf8026774feed7ce18 187 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 184 2.6E-65 T 12-10-2018 IPR006286 Deglycase PfpI PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 SMART SM00091 205 271 6.3E-6 T 12-10-2018 IPR000014 PAS domain PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 547 556 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 SUPERFAMILY SSF159800 22 195 1.57E-40 T 12-10-2018 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:3.40.50.10660 90 177 1.7E-48 T 12-10-2018 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 Pfam PF00158 Sigma-54 interaction domain 333 499 2.4E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:1.10.8.60 504 569 6.6E-16 T 12-10-2018 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 356 369 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 SUPERFAMILY SSF46689 547 647 3.26E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 SMART SM00382 352 497 1.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 SUPERFAMILY SSF55785 204 299 2.79E-12 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:3.40.50.300 322 503 1.1E-62 T 12-10-2018 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 SUPERFAMILY SSF52540 333 564 5.83E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 204 313 2.8E-6 T 12-10-2018 IPR000014 PAS domain PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:3.30.450.20 195 305 2.2E-19 T 12-10-2018 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:1.10.10.60 610 649 3.4E-11 T 12-10-2018 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 Pfam PF08448 PAS fold 211 308 1.2E-7 T 12-10-2018 IPR013656 PAS fold-4 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:3.40.50.2300 22 191 1.7E-48 T 12-10-2018 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 Pfam PF06506 Propionate catabolism activator 37 199 2.6E-41 T 12-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 615 632 1.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 632 650 1.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_3508 a8210035729457cf18af5c0cb347bd0c 650 Pfam PF02954 Bacterial regulatory protein, Fis family 615 647 6.0E-11 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_0424 83f1e4ce7ae6c2932efcb4473f12de7f 157 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 103 127 - T 12-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site PA257_0424 83f1e4ce7ae6c2932efcb4473f12de7f 157 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 9 152 2.3E-24 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 PA257_0424 83f1e4ce7ae6c2932efcb4473f12de7f 157 SUPERFAMILY SSF56300 8 157 5.29E-35 T 12-10-2018 PA257_0424 83f1e4ce7ae6c2932efcb4473f12de7f 157 Gene3D G3DSA:3.60.21.10 8 157 3.6E-31 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like PA257_0424 83f1e4ce7ae6c2932efcb4473f12de7f 157 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 9 145 2.7E-31 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 PA257_0378 762b3a3b92b1ebbbd68f47af1fc965a3 209 Gene3D G3DSA:2.60.120.620 8 205 1.8E-54 T 12-10-2018 PA257_0378 762b3a3b92b1ebbbd68f47af1fc965a3 209 SMART SM00702 20 199 3.2E-37 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 PA257_0378 762b3a3b92b1ebbbd68f47af1fc965a3 209 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 111 199 2.8E-19 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 Gene3D G3DSA:1.20.200.10 47 473 1.9E-125 T 12-10-2018 PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 ProSitePatterns PS00163 Fumarate lyases signature. 309 318 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 Pfam PF10397 Adenylosuccinate lyase C-terminus 400 475 7.7E-12 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 Pfam PF00206 Lyase 54 327 4.0E-42 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 SUPERFAMILY SSF48557 43 480 2.67E-104 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 1.5E-9 T 12-10-2018 PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 PRINTS PR00145 Argininosuccinate lyase family signature 264 288 1.5E-9 T 12-10-2018 PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 PRINTS PR00145 Argininosuccinate lyase family signature 309 325 1.5E-9 T 12-10-2018 PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 SMART SM00998 397 476 4.2E-16 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 9.6E-25 T 12-10-2018 IPR000362 Fumarate lyase family PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 9.6E-25 T 12-10-2018 IPR000362 Fumarate lyase family PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 PRINTS PR00149 Fumarate lyase superfamily signature 309 325 9.6E-25 T 12-10-2018 IPR000362 Fumarate lyase family PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 PRINTS PR00149 Fumarate lyase superfamily signature 264 291 9.6E-25 T 12-10-2018 IPR000362 Fumarate lyase family PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 Gene3D G3DSA:1.10.275.60 57 261 1.9E-125 T 12-10-2018 PA257_1769 dc217cd42cdfa5e4507b0efdf5a76dbd 483 Gene3D G3DSA:1.10.40.30 395 464 1.9E-125 T 12-10-2018 PA257_3877 b5154ce155078e9514a5c1874e6f08fd 340 SUPERFAMILY SSF144083 275 336 2.48E-15 T 12-10-2018 PA257_3877 b5154ce155078e9514a5c1874e6f08fd 340 Pfam PF01544 CorA-like Mg2+ transporter protein 49 332 1.2E-50 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PA257_3877 b5154ce155078e9514a5c1874e6f08fd 340 Gene3D G3DSA:1.20.58.340 282 338 1.7E-14 T 12-10-2018 PA257_3877 b5154ce155078e9514a5c1874e6f08fd 340 SUPERFAMILY SSF143865 13 272 3.92E-34 T 12-10-2018 PA257_3877 b5154ce155078e9514a5c1874e6f08fd 340 Gene3D G3DSA:1.20.58.340 157 278 6.8E-15 T 12-10-2018 PA257_3877 b5154ce155078e9514a5c1874e6f08fd 340 Gene3D G3DSA:3.30.460.20 7 149 9.5E-31 T 12-10-2018 PA257_3261 f71e2e452636b9a70316f80f5d18ca3e 156 SUPERFAMILY SSF47741 83 152 6.28E-29 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily PA257_3261 f71e2e452636b9a70316f80f5d18ca3e 156 Gene3D G3DSA:3.10.20.30 1 77 3.8E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_3261 f71e2e452636b9a70316f80f5d18ca3e 156 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PA257_3261 f71e2e452636b9a70316f80f5d18ca3e 156 Pfam PF01799 [2Fe-2S] binding domain 72 144 4.2E-25 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PA257_3261 f71e2e452636b9a70316f80f5d18ca3e 156 Gene3D G3DSA:1.10.150.120 78 156 1.9E-25 T 12-10-2018 PA257_3261 f71e2e452636b9a70316f80f5d18ca3e 156 SUPERFAMILY SSF54292 2 76 1.19E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_3261 f71e2e452636b9a70316f80f5d18ca3e 156 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 59 5.6E-7 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_3988 c2a22e73fcd365ed4e27df1278bc8626 403 Pfam PF07690 Major Facilitator Superfamily 23 348 3.2E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3988 c2a22e73fcd365ed4e27df1278bc8626 403 TIGRFAM TIGR00886 2A0108: nitrite transporter 13 347 2.7E-100 T 12-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 PA257_3988 c2a22e73fcd365ed4e27df1278bc8626 403 Gene3D G3DSA:1.20.1250.20 2 388 2.9E-84 T 12-10-2018 PA257_3988 c2a22e73fcd365ed4e27df1278bc8626 403 SUPERFAMILY SSF103473 6 390 9.16E-56 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3635 917abc267dd5ad697d554ab5fa41cbda 344 Gene3D G3DSA:1.10.10.60 237 341 1.5E-21 T 12-10-2018 PA257_3635 917abc267dd5ad697d554ab5fa41cbda 344 SUPERFAMILY SSF46689 288 339 2.15E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3635 917abc267dd5ad697d554ab5fa41cbda 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 319 6.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_3635 917abc267dd5ad697d554ab5fa41cbda 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 319 335 6.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_3635 917abc267dd5ad697d554ab5fa41cbda 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 26 210 3.4E-44 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_3635 917abc267dd5ad697d554ab5fa41cbda 344 Pfam PF12833 Helix-turn-helix domain 259 337 1.0E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3635 917abc267dd5ad697d554ab5fa41cbda 344 SMART SM00342 253 335 1.5E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2267 fa23d652bcd3887c8bad1eff36009ddb 56 Gene3D G3DSA:3.40.30.10 3 56 2.4E-12 T 12-10-2018 PA257_2267 fa23d652bcd3887c8bad1eff36009ddb 56 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 54 7.0E-8 T 12-10-2018 IPR008554 Glutaredoxin-like PA257_2267 fa23d652bcd3887c8bad1eff36009ddb 56 SUPERFAMILY SSF52833 6 54 2.86E-7 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_6812 6dfd2b7d74ec1f3a7ec292d6587ba5a2 106 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 3 87 2.1E-40 T 12-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PA257_6812 6dfd2b7d74ec1f3a7ec292d6587ba5a2 106 Pfam PF04267 Sarcosine oxidase, delta subunit family 4 84 6.6E-37 T 12-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PA257_6812 6dfd2b7d74ec1f3a7ec292d6587ba5a2 106 Gene3D G3DSA:3.30.2270.10 1 98 6.0E-37 T 12-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PA257_1201 e5992febc73a98ff157a7e1ce91eef14 193 SUPERFAMILY SSF52499 11 191 2.22E-51 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_1201 e5992febc73a98ff157a7e1ce91eef14 193 Gene3D G3DSA:3.40.50.850 5 192 4.8E-57 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_1201 e5992febc73a98ff157a7e1ce91eef14 193 Pfam PF00857 Isochorismatase family 14 185 1.3E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_4022 327573540f5a41b82b665bfcecb91505 315 Pfam PF02558 Ketopantoate reductase PanE/ApbA 8 157 3.4E-38 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain PA257_4022 327573540f5a41b82b665bfcecb91505 315 SUPERFAMILY SSF51735 7 162 7.16E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4022 327573540f5a41b82b665bfcecb91505 315 Gene3D G3DSA:3.40.50.720 5 186 3.8E-46 T 12-10-2018 PA257_4022 327573540f5a41b82b665bfcecb91505 315 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 188 310 7.8E-25 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain PA257_4022 327573540f5a41b82b665bfcecb91505 315 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 7 313 9.6E-85 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 PA257_4022 327573540f5a41b82b665bfcecb91505 315 Gene3D G3DSA:1.10.1040.10 188 314 1.1E-36 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_4022 327573540f5a41b82b665bfcecb91505 315 SUPERFAMILY SSF48179 188 311 2.58E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 SUPERFAMILY SSF53623 103 318 6.02E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 Gene3D G3DSA:3.40.1390.10 1 82 3.6E-32 T 12-10-2018 PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 450 2.5E-148 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 Gene3D G3DSA:3.40.1190.10 83 318 1.0E-96 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 Pfam PF01225 Mur ligase family, catalytic domain 26 94 1.1E-9 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 Gene3D G3DSA:3.90.190.20 319 451 3.0E-50 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 Pfam PF08245 Mur ligase middle domain 108 300 1.4E-47 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 SUPERFAMILY SSF53244 320 450 5.26E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 391 2.3E-12 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 SUPERFAMILY SSF63418 5 98 7.19E-25 T 12-10-2018 IPR035911 MurE/MurF, N-terminal PA257_5483 c161d3a9062c2295ed1ea3b6ccd23432 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 451 33.894 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_6886 bb8f1caa0efecdb6a0c9caedb3792f21 259 Gene3D G3DSA:1.10.101.10 180 259 4.3E-26 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PA257_6886 bb8f1caa0efecdb6a0c9caedb3792f21 259 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 34 166 2.1E-31 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_6886 bb8f1caa0efecdb6a0c9caedb3792f21 259 Gene3D G3DSA:3.40.80.10 34 179 1.5E-55 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_6886 bb8f1caa0efecdb6a0c9caedb3792f21 259 SMART SM00644 24 165 1.0E-41 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_6886 bb8f1caa0efecdb6a0c9caedb3792f21 259 SUPERFAMILY SSF47090 194 255 4.32E-17 T 12-10-2018 IPR036365 PGBD-like superfamily PA257_6886 bb8f1caa0efecdb6a0c9caedb3792f21 259 Pfam PF01471 Putative peptidoglycan binding domain 199 253 1.2E-8 T 12-10-2018 IPR002477 Peptidoglycan binding-like PA257_6886 bb8f1caa0efecdb6a0c9caedb3792f21 259 SUPERFAMILY SSF55846 22 177 1.16E-54 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_1346 701db74427bdb380b87fade9f68c21f3 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 27 104 5.7E-29 T 12-10-2018 IPR003849 Preprotein translocase YajC PA257_1346 701db74427bdb380b87fade9f68c21f3 112 Pfam PF02699 Preprotein translocase subunit 28 101 1.3E-28 T 12-10-2018 IPR003849 Preprotein translocase YajC PA257_1346 701db74427bdb380b87fade9f68c21f3 112 SMART SM01323 22 104 5.8E-42 T 12-10-2018 IPR003849 Preprotein translocase YajC PA257_1346 701db74427bdb380b87fade9f68c21f3 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 44 4.7E-12 T 12-10-2018 IPR003849 Preprotein translocase YajC PA257_1346 701db74427bdb380b87fade9f68c21f3 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 62 80 4.7E-12 T 12-10-2018 IPR003849 Preprotein translocase YajC PA257_1842 c8c024256b4135b56ac64ddd3f65eeef 298 SUPERFAMILY SSF53474 13 288 7.28E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1842 c8c024256b4135b56ac64ddd3f65eeef 298 Gene3D G3DSA:3.40.50.1820 12 292 1.3E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1842 c8c024256b4135b56ac64ddd3f65eeef 298 PRINTS PR00412 Epoxide hydrolase signature 266 288 1.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_1842 c8c024256b4135b56ac64ddd3f65eeef 298 PRINTS PR00412 Epoxide hydrolase signature 42 60 1.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_1842 c8c024256b4135b56ac64ddd3f65eeef 298 PRINTS PR00412 Epoxide hydrolase signature 107 120 1.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_1842 c8c024256b4135b56ac64ddd3f65eeef 298 Pfam PF12697 Alpha/beta hydrolase family 38 283 6.3E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_4352 c1717e76589ce7ed82b698e6d112464d 427 Gene3D G3DSA:3.30.750.140 274 387 1.4E-33 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily PA257_4352 c1717e76589ce7ed82b698e6d112464d 427 Pfam PF02120 Flagellar hook-length control protein FliK 295 372 8.7E-23 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal PA257_3300 299f9cd2b249f1493b3cd801cd0fe6be 411 SUPERFAMILY SSF51905 12 333 2.02E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3300 299f9cd2b249f1493b3cd801cd0fe6be 411 SUPERFAMILY SSF51905 123 266 2.46E-18 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3300 299f9cd2b249f1493b3cd801cd0fe6be 411 Gene3D G3DSA:3.50.50.60 13 330 1.8E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3300 299f9cd2b249f1493b3cd801cd0fe6be 411 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 131 1.3E-7 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_3300 299f9cd2b249f1493b3cd801cd0fe6be 411 Gene3D G3DSA:3.50.50.60 125 266 1.8E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3649 da855b455e6a2eed66232f3126b93067 158 Gene3D G3DSA:3.30.70.920 56 138 3.2E-23 T 12-10-2018 PA257_3649 da855b455e6a2eed66232f3126b93067 158 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 3.6E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PA257_3649 da855b455e6a2eed66232f3126b93067 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.2E-19 T 12-10-2018 PA257_3649 da855b455e6a2eed66232f3126b93067 158 SUPERFAMILY SSF54909 65 146 5.77E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_3649 da855b455e6a2eed66232f3126b93067 158 SUPERFAMILY SSF46785 2 62 3.95E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3649 da855b455e6a2eed66232f3126b93067 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_3649 da855b455e6a2eed66232f3126b93067 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_3649 da855b455e6a2eed66232f3126b93067 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_3649 da855b455e6a2eed66232f3126b93067 158 Gene3D G3DSA:1.10.10.10 4 54 2.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3649 da855b455e6a2eed66232f3126b93067 158 SMART SM00344 3 112 3.1E-42 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 2.3E-63 T 12-10-2018 PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 1.3E-5 T 12-10-2018 PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 SUPERFAMILY SSF51735 4 246 6.59E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.6E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.6E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.6E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.6E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.6E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 Gene3D G3DSA:3.40.50.720 1 247 1.3E-85 T 12-10-2018 PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 1.1E-100 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2338 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2013 10ab75937c20bd20e7f3dca3c667bb59 1448 Pfam PF00271 Helicase conserved C-terminal domain 277 383 7.7E-19 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2013 10ab75937c20bd20e7f3dca3c667bb59 1448 Gene3D G3DSA:3.40.50.300 14 238 1.6E-54 T 12-10-2018 PA257_2013 10ab75937c20bd20e7f3dca3c667bb59 1448 Gene3D G3DSA:3.40.50.300 263 404 2.2E-27 T 12-10-2018 PA257_2013 10ab75937c20bd20e7f3dca3c667bb59 1448 SUPERFAMILY SSF52540 44 387 9.07E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2013 10ab75937c20bd20e7f3dca3c667bb59 1448 SMART SM00490 303 387 4.5E-18 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2013 10ab75937c20bd20e7f3dca3c667bb59 1448 SMART SM00487 32 249 3.3E-30 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_2013 10ab75937c20bd20e7f3dca3c667bb59 1448 Pfam PF00270 DEAD/DEAH box helicase 37 223 2.2E-25 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PA257_2013 10ab75937c20bd20e7f3dca3c667bb59 1448 Pfam PF08494 DEAD/H associated 653 855 1.3E-48 T 12-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 PA257_5649 afa74aa25c6da2b1591492b4970bb680 177 TIGRFAM TIGR03021 pilP_fam: type IV pilus biogenesis protein PilP 25 135 5.2E-33 T 12-10-2018 IPR022753 Type IV pilus biogenesis PilP PA257_1400 50b36c1c466542b169c3ed03cd830214 325 SUPERFAMILY SSF46894 251 321 3.16E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_1400 50b36c1c466542b169c3ed03cd830214 325 Pfam PF00196 Bacterial regulatory proteins, luxR family 264 318 1.1E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1400 50b36c1c466542b169c3ed03cd830214 325 Gene3D G3DSA:1.10.10.10 163 323 1.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1400 50b36c1c466542b169c3ed03cd830214 325 SMART SM00421 262 319 6.3E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1400 50b36c1c466542b169c3ed03cd830214 325 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 279 295 1.7E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1400 50b36c1c466542b169c3ed03cd830214 325 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 295 307 1.7E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1400 50b36c1c466542b169c3ed03cd830214 325 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 265 279 1.7E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_5586 00451aee633845b096c6d64902dbce1e 242 SMART SM00702 16 193 1.9E-36 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 PA257_5586 00451aee633845b096c6d64902dbce1e 242 Gene3D G3DSA:4.10.860.20 196 242 2.8E-23 T 12-10-2018 PA257_5586 00451aee633845b096c6d64902dbce1e 242 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 100 192 1.3E-12 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PA257_5586 00451aee633845b096c6d64902dbce1e 242 Gene3D G3DSA:2.60.120.620 8 194 2.7E-43 T 12-10-2018 PA257_5586 00451aee633845b096c6d64902dbce1e 242 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 17 242 46.219 T 12-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 PA257_5586 00451aee633845b096c6d64902dbce1e 242 SUPERFAMILY SSF51197 19 190 1.37E-6 T 12-10-2018 PA257_0740 d8f99861a3429e5a4e910672b8d4c49b 126 Pfam PF04379 ApaG domain 18 102 6.3E-36 T 12-10-2018 IPR007474 ApaG domain PA257_0740 d8f99861a3429e5a4e910672b8d4c49b 126 Gene3D G3DSA:2.60.40.1470 1 126 8.9E-50 T 12-10-2018 IPR036767 ApaG domain superfamily PA257_0740 d8f99861a3429e5a4e910672b8d4c49b 126 SUPERFAMILY SSF110069 4 126 3.01E-50 T 12-10-2018 IPR036767 ApaG domain superfamily PA257_0740 d8f99861a3429e5a4e910672b8d4c49b 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 34.651 T 12-10-2018 IPR023065 Uncharacterised protein family ApaG PA257_3656 90cc0a508cc4804010de2c3b5ab43951 634 SUPERFAMILY SSF46626 354 634 5.57E-16 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3656 90cc0a508cc4804010de2c3b5ab43951 634 SUPERFAMILY SSF46626 355 421 5.8E-5 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Gene3D G3DSA:1.10.150.20 628 687 7.4E-8 T 12-10-2018 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Gene3D G3DSA:2.20.70.80 403 454 2.3E-9 T 12-10-2018 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 334 410 3.1E-35 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Gene3D G3DSA:1.10.287.610 5 71 5.3E-30 T 12-10-2018 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 SUPERFAMILY SSF47781 416 603 1.04E-52 T 12-10-2018 IPR010994 RuvA domain 2-like PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 PIRSF PIRSF001604 620 792 2.8E-31 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 PIRSF PIRSF001604 1 622 1.5E-211 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Gene3D G3DSA:2.40.50.140 330 402 8.1E-34 T 12-10-2018 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 617 1.2E-221 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 713 787 1.1E-11 T 12-10-2018 IPR001357 BRCT domain PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 343 358 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 128 157 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Gene3D G3DSA:3.30.470.90 72 329 2.9E-96 T 12-10-2018 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 330 5.3E-125 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Hamap MF_01588 DNA ligase [ligA]. 5 787 52.918 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 SUPERFAMILY SSF47781 618 704 7.41E-14 T 12-10-2018 IPR010994 RuvA domain 2-like PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 SUPERFAMILY SSF50249 330 412 3.26E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 SUPERFAMILY SSF56091 5 329 2.34E-118 T 12-10-2018 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Gene3D G3DSA:1.10.150.20 530 611 2.6E-23 T 12-10-2018 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 SUPERFAMILY SSF52113 714 788 5.23E-17 T 12-10-2018 IPR036420 BRCT domain superfamily PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 SMART SM00532 6 472 1.1E-256 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 419 458 1.3E-13 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Gene3D G3DSA:1.10.150.20 456 529 2.2E-29 T 12-10-2018 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Gene3D G3DSA:3.40.50.10190 696 789 2.9E-23 T 12-10-2018 IPR036420 BRCT domain superfamily PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Pfam PF12826 Helix-hairpin-helix motif 534 597 3.1E-21 T 12-10-2018 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 Pfam PF12826 Helix-hairpin-helix motif 631 687 1.3E-8 T 12-10-2018 PA257_4259 ade87383a9488c1805aa33b3cfdf21db 794 SMART SM00292 713 790 6.3E-9 T 12-10-2018 IPR001357 BRCT domain PA257_4055 3c7dfa5a87bc9e0723d8e92cc982d439 85 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 13 85 5.4E-26 T 12-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 PA257_4055 3c7dfa5a87bc9e0723d8e92cc982d439 85 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 13 85 4.7E-22 T 12-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 PA257_4055 3c7dfa5a87bc9e0723d8e92cc982d439 85 Gene3D G3DSA:1.20.58.90 3 85 2.5E-11 T 12-10-2018 PA257_4055 3c7dfa5a87bc9e0723d8e92cc982d439 85 SUPERFAMILY SSF140129 8 81 1.83E-21 T 12-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 PA257_0152 5a849b0b8d3c0807f1037ae04119460a 475 Gene3D G3DSA:1.20.1740.10 21 466 7.1E-66 T 12-10-2018 PA257_0152 5a849b0b8d3c0807f1037ae04119460a 475 Pfam PF00324 Amino acid permease 26 449 2.3E-117 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_0152 5a849b0b8d3c0807f1037ae04119460a 475 TIGRFAM TIGR01773 GABAperm: GABA permease 1 461 2.7E-253 T 12-10-2018 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 PA257_0152 5a849b0b8d3c0807f1037ae04119460a 475 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PA257_0152 5a849b0b8d3c0807f1037ae04119460a 475 PIRSF PIRSF006060 8 472 8.2E-74 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_4836 c2766fb0c3e331cc4971b36995d2c777 212 PRINTS PR00502 NUDIX hydrolase family signature 98 112 8.5E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PA257_4836 c2766fb0c3e331cc4971b36995d2c777 212 PRINTS PR00502 NUDIX hydrolase family signature 112 127 8.5E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PA257_4836 c2766fb0c3e331cc4971b36995d2c777 212 Gene3D G3DSA:3.90.79.10 49 212 2.5E-38 T 12-10-2018 PA257_4836 c2766fb0c3e331cc4971b36995d2c777 212 Pfam PF00293 NUDIX domain 74 184 1.2E-19 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_4836 c2766fb0c3e331cc4971b36995d2c777 212 ProSitePatterns PS00893 Nudix box signature. 103 124 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PA257_4836 c2766fb0c3e331cc4971b36995d2c777 212 SUPERFAMILY SSF55811 67 203 3.25E-33 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_4836 c2766fb0c3e331cc4971b36995d2c777 212 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 11 62 2.1E-13 T 12-10-2018 PA257_0863 3bc26d49d732dc3f67de58190a78e8a4 165 SUPERFAMILY SSF50249 3 165 2.78E-61 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_0863 3bc26d49d732dc3f67de58190a78e8a4 165 Pfam PF00436 Single-strand binding protein family 5 111 3.9E-43 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 PA257_0863 3bc26d49d732dc3f67de58190a78e8a4 165 Hamap MF_00984 Single-stranded DNA-binding protein. 5 116 39.463 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 PA257_0863 3bc26d49d732dc3f67de58190a78e8a4 165 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 165 4.9E-62 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 PA257_0863 3bc26d49d732dc3f67de58190a78e8a4 165 PIRSF PIRSF002070 1 159 8.8E-41 T 12-10-2018 PA257_0863 3bc26d49d732dc3f67de58190a78e8a4 165 Gene3D G3DSA:2.40.50.140 1 155 2.9E-51 T 12-10-2018 PA257_5880 1bdcff90ec2c050e0b88f4c0a06d8259 412 Pfam PF03577 Peptidase family C69 11 214 1.8E-8 T 12-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 PA257_5880 1bdcff90ec2c050e0b88f4c0a06d8259 412 Gene3D G3DSA:3.60.60.10 2 308 3.4E-16 T 12-10-2018 PA257_0629 80046c4f83ce18a6e1faa554f75d629b 241 Gene3D G3DSA:3.40.50.2020 82 241 5.1E-17 T 12-10-2018 PA257_0629 80046c4f83ce18a6e1faa554f75d629b 241 Pfam PF00156 Phosphoribosyl transferase domain 143 238 4.8E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PA257_0629 80046c4f83ce18a6e1faa554f75d629b 241 SUPERFAMILY SSF53271 47 239 4.2E-32 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like PA257_4992 1fbb0d4d169e301682b835e7aa39e523 101 Gene3D G3DSA:3.30.300.90 1 85 1.4E-24 T 12-10-2018 PA257_4992 1fbb0d4d169e301682b835e7aa39e523 101 SUPERFAMILY SSF82657 3 83 4.32E-28 T 12-10-2018 IPR036065 BolA-like superfamily PA257_4992 1fbb0d4d169e301682b835e7aa39e523 101 PIRSF PIRSF003113 1 94 5.4E-29 T 12-10-2018 IPR002634 BolA protein PA257_4992 1fbb0d4d169e301682b835e7aa39e523 101 Pfam PF01722 BolA-like protein 12 80 9.7E-24 T 12-10-2018 IPR002634 BolA protein PA257_1032 684fc83e131d938f3e853843a9a66494 268 Gene3D G3DSA:3.90.1200.10 98 268 5.1E-61 T 12-10-2018 PA257_1032 684fc83e131d938f3e853843a9a66494 268 Pfam PF01636 Phosphotransferase enzyme family 29 259 4.7E-35 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase PA257_1032 684fc83e131d938f3e853843a9a66494 268 SUPERFAMILY SSF56112 14 267 3.06E-54 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_1032 684fc83e131d938f3e853843a9a66494 268 Gene3D G3DSA:3.30.200.20 3 96 1.0E-30 T 12-10-2018 PA257_1032 684fc83e131d938f3e853843a9a66494 268 PIRSF PIRSF000706 3 268 4.9E-98 T 12-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 PA257_0214 317bc2c1662587c99aca90cf864dbbde 452 Gene3D G3DSA:2.40.160.10 6 452 6.1E-129 T 12-10-2018 IPR023614 Porin domain superfamily PA257_0214 317bc2c1662587c99aca90cf864dbbde 452 Pfam PF03573 outer membrane porin, OprD family 29 450 7.1E-140 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_1876 57e65bbd2cd27181b4c81fc4bfd275af 258 Pfam PF00175 Oxidoreductase NAD-binding domain 112 228 7.4E-8 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_1876 57e65bbd2cd27181b4c81fc4bfd275af 258 SUPERFAMILY SSF63380 3 99 2.33E-27 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_1876 57e65bbd2cd27181b4c81fc4bfd275af 258 SUPERFAMILY SSF52343 102 256 1.44E-42 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_1876 57e65bbd2cd27181b4c81fc4bfd275af 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 98 4.7E-9 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PA257_1876 57e65bbd2cd27181b4c81fc4bfd275af 258 Gene3D G3DSA:3.40.50.80 98 258 1.2E-41 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_1876 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 1.4E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_1876 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 1.4E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_1876 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 1.4E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_1876 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 1.4E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_1876 57e65bbd2cd27181b4c81fc4bfd275af 258 Gene3D G3DSA:2.40.30.10 1 97 1.5E-30 T 12-10-2018 PA257_4157 048bfaf465b76b03b151557fc47bf559 355 Pfam PF01594 AI-2E family transporter 11 338 1.1E-39 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like PA257_0466 49d5076b27c73e65b1996471f8c543ca 379 Gene3D G3DSA:3.40.50.1820 26 362 7.0E-137 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0466 49d5076b27c73e65b1996471f8c543ca 379 PIRSF PIRSF000443 2 379 2.3E-132 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 PA257_0466 49d5076b27c73e65b1996471f8c543ca 379 Gene3D G3DSA:1.10.1740.110 187 293 7.0E-137 T 12-10-2018 PA257_0466 49d5076b27c73e65b1996471f8c543ca 379 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 13 375 28.601 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 PA257_0466 49d5076b27c73e65b1996471f8c543ca 379 SUPERFAMILY SSF53474 13 375 9.76E-101 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0466 49d5076b27c73e65b1996471f8c543ca 379 Pfam PF00561 alpha/beta hydrolase fold 51 360 1.3E-31 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0466 49d5076b27c73e65b1996471f8c543ca 379 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 21 370 1.1E-136 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 PA257_5878 bb460e9061938fd072657c46adbf01a1 707 SUPERFAMILY SSF56935 1 707 1.76E-93 T 12-10-2018 PA257_5878 bb460e9061938fd072657c46adbf01a1 707 Pfam PF00593 TonB dependent receptor 237 705 3.6E-31 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_5878 bb460e9061938fd072657c46adbf01a1 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 13 115 2.0E-19 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_5878 bb460e9061938fd072657c46adbf01a1 707 Gene3D G3DSA:2.40.170.20 126 707 2.4E-52 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_5878 bb460e9061938fd072657c46adbf01a1 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 14 707 1.3E-91 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_5878 bb460e9061938fd072657c46adbf01a1 707 Gene3D G3DSA:2.170.130.10 1 120 7.0E-23 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_5320 ccbdaa8c7f9b991798a2342755cb225a 403 Pfam PF05134 Type II secretion system (T2SS), protein L 39 169 1.3E-6 T 12-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain PA257_5320 ccbdaa8c7f9b991798a2342755cb225a 403 SUPERFAMILY SSF53067 19 144 6.6E-9 T 12-10-2018 PA257_5320 ccbdaa8c7f9b991798a2342755cb225a 403 Gene3D G3DSA:3.30.420.380 25 170 1.0E-8 T 12-10-2018 PA257_5320 ccbdaa8c7f9b991798a2342755cb225a 403 Pfam PF12693 GspL periplasmic domain 229 402 2.5E-44 T 12-10-2018 IPR025691 GspL periplasmic domain PA257_5115 04bd596765f37f933fa100ba28484d21 262 SMART SM00342 170 252 3.2E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5115 04bd596765f37f933fa100ba28484d21 262 SUPERFAMILY SSF46689 211 254 5.82E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5115 04bd596765f37f933fa100ba28484d21 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 205 248 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_5115 04bd596765f37f933fa100ba28484d21 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 221 236 9.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_5115 04bd596765f37f933fa100ba28484d21 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 252 9.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_5115 04bd596765f37f933fa100ba28484d21 262 Pfam PF12833 Helix-turn-helix domain 176 252 2.9E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_5115 04bd596765f37f933fa100ba28484d21 262 Gene3D G3DSA:2.60.120.10 6 97 4.6E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_5115 04bd596765f37f933fa100ba28484d21 262 Gene3D G3DSA:1.10.10.60 158 256 2.3E-17 T 12-10-2018 PA257_5115 04bd596765f37f933fa100ba28484d21 262 SUPERFAMILY SSF51182 10 179 1.21E-20 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_5115 04bd596765f37f933fa100ba28484d21 262 Pfam PF02311 AraC-like ligand binding domain 25 118 1.8E-8 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_4518 4a69f97947a20b271862a0c853b25aaa 194 SUPERFAMILY SSF53254 2 188 7.71E-48 T 12-10-2018 IPR029033 Histidine phosphatase superfamily PA257_4518 4a69f97947a20b271862a0c853b25aaa 194 Gene3D G3DSA:3.40.50.1240 2 191 3.9E-46 T 12-10-2018 IPR029033 Histidine phosphatase superfamily PA257_4518 4a69f97947a20b271862a0c853b25aaa 194 SMART SM00855 4 153 1.0E-14 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PA257_4518 4a69f97947a20b271862a0c853b25aaa 194 PIRSF PIRSF000709 6 189 0.0038 T 12-10-2018 PA257_4518 4a69f97947a20b271862a0c853b25aaa 194 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 184 7.9E-43 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PA257_0101 714aad394510280c290ea8fba6d962e4 493 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 487 1.7E-166 T 12-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein PA257_0101 714aad394510280c290ea8fba6d962e4 493 SMART SM00240 27 78 6.5E-5 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PA257_0101 714aad394510280c290ea8fba6d962e4 493 Pfam PF00498 FHA domain 29 97 5.2E-15 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PA257_0101 714aad394510280c290ea8fba6d962e4 493 Gene3D G3DSA:2.60.200.20 5 109 2.3E-20 T 12-10-2018 PA257_0101 714aad394510280c290ea8fba6d962e4 493 SUPERFAMILY SSF49879 13 107 1.05E-21 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 PA257_1338 34d593df41a0579ed2b519c2551bf28a 372 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 353 1.1E-118 T 12-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 PA257_1338 34d593df41a0579ed2b519c2551bf28a 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 352 1.9E-73 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 PA257_2778 d9d4bdb12db35ccadaa129c6f4b6b975 147 Pfam PF05232 Chlorhexidine efflux transporter 71 133 5.3E-23 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter PA257_2778 d9d4bdb12db35ccadaa129c6f4b6b975 147 Pfam PF05232 Chlorhexidine efflux transporter 3 65 4.1E-17 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter PA257_5486 d23a2dd63695431d8c931cd4ceeae15d 97 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 13 95 9.3E-24 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 PA257_5486 d23a2dd63695431d8c931cd4ceeae15d 97 Pfam PF04999 Cell division protein FtsL 1 96 2.1E-32 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 PA257_5486 d23a2dd63695431d8c931cd4ceeae15d 97 Hamap MF_00910 Cell division protein FtsL [ftsL]. 12 95 15.538 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 PA257_1673 b01a8fdd049f36c87ad00075923c2d5c 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.7E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1673 b01a8fdd049f36c87ad00075923c2d5c 87 PRINTS PR01249 Ribosomal protein L31 signature 45 60 6.7E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1673 b01a8fdd049f36c87ad00075923c2d5c 87 PRINTS PR01249 Ribosomal protein L31 signature 60 78 6.7E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1673 b01a8fdd049f36c87ad00075923c2d5c 87 SUPERFAMILY SSF143800 1 81 6.28E-22 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_1673 b01a8fdd049f36c87ad00075923c2d5c 87 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1673 b01a8fdd049f36c87ad00075923c2d5c 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 1.5E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1673 b01a8fdd049f36c87ad00075923c2d5c 87 Gene3D G3DSA:2.30.170.50 1 83 1.4E-21 T 12-10-2018 PA257_1673 b01a8fdd049f36c87ad00075923c2d5c 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 27.111 T 12-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1673 b01a8fdd049f36c87ad00075923c2d5c 87 Pfam PF01197 Ribosomal protein L31 1 79 5.7E-25 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6508 3917fdbbf6947bd0ba366d12b7a314a8 380 Gene3D G3DSA:1.10.443.10 185 372 3.9E-10 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_6508 3917fdbbf6947bd0ba366d12b7a314a8 380 Gene3D G3DSA:1.10.150.130 71 184 4.2E-13 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_6508 3917fdbbf6947bd0ba366d12b7a314a8 380 SUPERFAMILY SSF56349 74 369 3.83E-33 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_6600 b3830dcc18c868a54e2805fa847a7e4d 157 SUPERFAMILY SSF54637 7 155 4.8E-29 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6600 b3830dcc18c868a54e2805fa847a7e4d 157 Gene3D G3DSA:3.10.129.10 1 157 6.4E-50 T 12-10-2018 PA257_6600 b3830dcc18c868a54e2805fa847a7e4d 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 155 7.0E-17 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PA257_6600 b3830dcc18c868a54e2805fa847a7e4d 157 Pfam PF03061 Thioesterase superfamily 58 148 1.3E-18 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_4724 c7ab7bd04c3d0bc2867c451d05db195e 1168 SUPERFAMILY SSF53448 336 498 3.84E-10 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4724 c7ab7bd04c3d0bc2867c451d05db195e 1168 Pfam PF00535 Glycosyl transferase family 2 8 123 1.4E-20 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_4724 c7ab7bd04c3d0bc2867c451d05db195e 1168 Gene3D G3DSA:3.90.550.10 554 794 7.5E-32 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4724 c7ab7bd04c3d0bc2867c451d05db195e 1168 SUPERFAMILY SSF53756 883 1149 3.85E-8 T 12-10-2018 PA257_4724 c7ab7bd04c3d0bc2867c451d05db195e 1168 SUPERFAMILY SSF53448 6 230 1.91E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4724 c7ab7bd04c3d0bc2867c451d05db195e 1168 Pfam PF13641 Glycosyltransferase like family 2 563 794 3.5E-17 T 12-10-2018 PA257_4724 c7ab7bd04c3d0bc2867c451d05db195e 1168 SUPERFAMILY SSF53448 565 782 4.22E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4724 c7ab7bd04c3d0bc2867c451d05db195e 1168 Gene3D G3DSA:3.90.550.10 1 239 2.2E-32 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4724 c7ab7bd04c3d0bc2867c451d05db195e 1168 Gene3D G3DSA:3.40.50.2000 992 1137 2.0E-8 T 12-10-2018 PA257_5179 835090ab42d2bb23457339583ee6981e 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PA257_5179 835090ab42d2bb23457339583ee6981e 230 Gene3D G3DSA:3.30.70.580 63 227 9.1E-51 T 12-10-2018 PA257_5179 835090ab42d2bb23457339583ee6981e 230 Gene3D G3DSA:3.30.70.1560 128 209 9.1E-51 T 12-10-2018 PA257_5179 835090ab42d2bb23457339583ee6981e 230 Pfam PF00849 RNA pseudouridylate synthase 62 190 7.1E-13 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5179 835090ab42d2bb23457339583ee6981e 230 SMART SM00363 1 58 1.2E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_5179 835090ab42d2bb23457339583ee6981e 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 1.9E-40 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PA257_5179 835090ab42d2bb23457339583ee6981e 230 SUPERFAMILY SSF55120 61 227 1.22E-42 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_5179 835090ab42d2bb23457339583ee6981e 230 Pfam PF01479 S4 domain 1 42 3.4E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_5179 835090ab42d2bb23457339583ee6981e 230 SUPERFAMILY SSF55174 1 90 4.71E-14 T 12-10-2018 PA257_5179 835090ab42d2bb23457339583ee6981e 230 Gene3D G3DSA:3.10.290.10 1 62 1.1E-15 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PA257_5378 157725f751454ca11ae9737cff042b70 283 SUPERFAMILY SSF53328 87 283 1.96E-62 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_5378 157725f751454ca11ae9737cff042b70 283 SUPERFAMILY SSF55021 3 84 1.75E-14 T 12-10-2018 PA257_5378 157725f751454ca11ae9737cff042b70 283 Pfam PF00551 Formyl transferase 87 261 8.0E-39 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_5378 157725f751454ca11ae9737cff042b70 283 Gene3D G3DSA:3.40.50.170 87 283 3.2E-79 T 12-10-2018 PA257_5378 157725f751454ca11ae9737cff042b70 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 282 2.6E-110 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_5378 157725f751454ca11ae9737cff042b70 283 Gene3D G3DSA:3.30.70.260 1 86 1.9E-27 T 12-10-2018 PA257_5378 157725f751454ca11ae9737cff042b70 283 PIRSF PIRSF036480 1 283 2.3E-119 T 12-10-2018 PA257_5378 157725f751454ca11ae9737cff042b70 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 282 49.118 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_5378 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 8.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_5378 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 8.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_5378 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 8.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_5378 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 8.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_5378 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 8.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_5378 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 8.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PA257_2136 f84d4bf3975ef1bc7b07223c69825162 381 Gene3D G3DSA:3.90.1150.10 38 372 1.3E-118 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_2136 f84d4bf3975ef1bc7b07223c69825162 381 SUPERFAMILY SSF53383 29 378 5.09E-81 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_2136 f84d4bf3975ef1bc7b07223c69825162 381 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 19 378 62.863 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PA257_2136 f84d4bf3975ef1bc7b07223c69825162 381 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 22 376 4.9E-117 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PA257_2136 f84d4bf3975ef1bc7b07223c69825162 381 Gene3D G3DSA:3.40.640.10 62 286 1.3E-118 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_2136 f84d4bf3975ef1bc7b07223c69825162 381 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 238 247 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 PA257_2136 f84d4bf3975ef1bc7b07223c69825162 381 Pfam PF00155 Aminotransferase class I and II 50 374 2.0E-50 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_6566 117198d33f7b58181b12615da6820e33 142 Gene3D G3DSA:2.40.50.100 15 141 1.9E-47 T 12-10-2018 PA257_6566 117198d33f7b58181b12615da6820e33 142 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 16 140 7.2E-46 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PA257_6566 117198d33f7b58181b12615da6820e33 142 Pfam PF01597 Glycine cleavage H-protein 21 138 1.7E-42 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate PA257_6566 117198d33f7b58181b12615da6820e33 142 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 62 91 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PA257_6566 117198d33f7b58181b12615da6820e33 142 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 18 139 39.116 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PA257_6566 117198d33f7b58181b12615da6820e33 142 SUPERFAMILY SSF51230 16 139 2.09E-40 T 12-10-2018 IPR011053 Single hybrid motif PA257_2927 2cc39635d965a1b598a7e881db64ed71 296 Pfam PF00892 EamA-like transporter family 17 147 8.5E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_2927 2cc39635d965a1b598a7e881db64ed71 296 Pfam PF00892 EamA-like transporter family 158 283 1.9E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_2927 2cc39635d965a1b598a7e881db64ed71 296 SUPERFAMILY SSF103481 190 290 6.41E-13 T 12-10-2018 PA257_2927 2cc39635d965a1b598a7e881db64ed71 296 SUPERFAMILY SSF103481 50 151 3.14E-17 T 12-10-2018 PA257_3935 7b52f2ef9aab1f781d49128cbaadecdb 278 Hamap MF_00297 NADH pyrophosphatase [nudC]. 8 273 50.644 T 12-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 PA257_3935 7b52f2ef9aab1f781d49128cbaadecdb 278 Gene3D G3DSA:3.90.79.20 5 141 9.3E-26 T 12-10-2018 PA257_3935 7b52f2ef9aab1f781d49128cbaadecdb 278 ProSitePatterns PS00893 Nudix box signature. 175 196 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PA257_3935 7b52f2ef9aab1f781d49128cbaadecdb 278 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 19 107 1.0E-11 T 12-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 PA257_3935 7b52f2ef9aab1f781d49128cbaadecdb 278 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 109 140 1.5E-11 T 12-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 PA257_3935 7b52f2ef9aab1f781d49128cbaadecdb 278 Pfam PF00293 NUDIX domain 145 258 2.9E-22 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_3935 7b52f2ef9aab1f781d49128cbaadecdb 278 Gene3D G3DSA:3.90.79.10 142 270 2.3E-42 T 12-10-2018 PA257_3935 7b52f2ef9aab1f781d49128cbaadecdb 278 SUPERFAMILY SSF55811 94 260 1.33E-45 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_3935 7b52f2ef9aab1f781d49128cbaadecdb 278 SUPERFAMILY SSF55811 8 112 2.23E-23 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_5241 addc96d102fd0887f5acfa88e8c6e2ff 919 Pfam PF01526 Tn3 transposase DDE domain 580 911 9.0E-134 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 PA257_5241 addc96d102fd0887f5acfa88e8c6e2ff 919 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 5.5E-54 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 PA257_6716 43c52eadd3cb5144e8fb035d3e145056 213 Pfam PF00156 Phosphoribosyl transferase domain 44 159 6.6E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PA257_6716 43c52eadd3cb5144e8fb035d3e145056 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.028 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_6716 43c52eadd3cb5144e8fb035d3e145056 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 186 6.3E-62 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PA257_6716 43c52eadd3cb5144e8fb035d3e145056 213 SUPERFAMILY SSF53271 1 211 3.98E-50 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like PA257_6716 43c52eadd3cb5144e8fb035d3e145056 213 Gene3D G3DSA:3.40.50.2020 1 213 6.3E-78 T 12-10-2018 PA257_3905 e44c0d7e2b1da1b8437e7db55249df28 334 Gene3D G3DSA:1.10.10.60 228 330 3.3E-27 T 12-10-2018 PA257_3905 e44c0d7e2b1da1b8437e7db55249df28 334 Pfam PF12833 Helix-turn-helix domain 250 329 2.9E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3905 e44c0d7e2b1da1b8437e7db55249df28 334 SUPERFAMILY SSF46689 280 330 3.94E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3905 e44c0d7e2b1da1b8437e7db55249df28 334 Gene3D G3DSA:3.40.50.880 1 227 1.1E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_3905 e44c0d7e2b1da1b8437e7db55249df28 334 SUPERFAMILY SSF52317 6 208 9.67E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_3905 e44c0d7e2b1da1b8437e7db55249df28 334 SMART SM00342 244 327 8.9E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3905 e44c0d7e2b1da1b8437e7db55249df28 334 SUPERFAMILY SSF46689 228 277 1.33E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3905 e44c0d7e2b1da1b8437e7db55249df28 334 Pfam PF01965 DJ-1/PfpI family 7 188 1.6E-21 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_6075 09981ae0c1b4a1aee8878a0f7143f64d 205 Pfam PF13649 Methyltransferase domain 44 140 4.2E-12 T 12-10-2018 PA257_6075 09981ae0c1b4a1aee8878a0f7143f64d 205 Gene3D G3DSA:3.40.50.150 4 195 9.9E-25 T 12-10-2018 PA257_6075 09981ae0c1b4a1aee8878a0f7143f64d 205 SUPERFAMILY SSF53335 3 189 3.07E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3791 f111b5ed1181faadde3281a996a4e54d 421 Pfam PF13557 Putative MetA-pathway of phenol degradation 213 417 3.8E-6 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative PA257_2764 af8aba33d8475c998bbd48f1a165b535 136 Pfam PF00293 NUDIX domain 5 120 4.4E-21 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_2764 af8aba33d8475c998bbd48f1a165b535 136 Gene3D G3DSA:3.90.79.10 1 134 2.3E-42 T 12-10-2018 PA257_2764 af8aba33d8475c998bbd48f1a165b535 136 SUPERFAMILY SSF55811 4 128 1.76E-30 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_2764 af8aba33d8475c998bbd48f1a165b535 136 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PA257_2764 af8aba33d8475c998bbd48f1a165b535 136 PRINTS PR00502 NUDIX hydrolase family signature 32 46 7.5E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PA257_2764 af8aba33d8475c998bbd48f1a165b535 136 PRINTS PR00502 NUDIX hydrolase family signature 46 61 7.5E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PA257_6280 0430f341e63e3ad55022e3149176f7e6 270 SUPERFAMILY SSF51430 10 267 1.96E-47 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_6280 0430f341e63e3ad55022e3149176f7e6 270 Gene3D G3DSA:3.20.20.100 1 270 5.8E-111 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_6280 0430f341e63e3ad55022e3149176f7e6 270 Pfam PF00248 Aldo/keto reductase family 22 219 2.6E-30 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain PA257_4587 724e9b322cfc23c326f975e602276483 204 Gene3D G3DSA:3.40.50.1820 1 201 1.5E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4587 724e9b322cfc23c326f975e602276483 204 SUPERFAMILY SSF53474 2 190 5.79E-24 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4587 724e9b322cfc23c326f975e602276483 204 Pfam PF12697 Alpha/beta hydrolase family 4 172 2.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_1246 71576fb27b3d1c9fd5fbd53f9dc8ea53 83 Pfam PF02597 ThiS family 4 83 3.2E-19 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 PA257_1246 71576fb27b3d1c9fd5fbd53f9dc8ea53 83 SUPERFAMILY SSF54285 1 83 7.66E-22 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PA257_1246 71576fb27b3d1c9fd5fbd53f9dc8ea53 83 Gene3D G3DSA:3.10.20.30 1 83 2.7E-23 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_1246 71576fb27b3d1c9fd5fbd53f9dc8ea53 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 83 6.6E-19 T 12-10-2018 PA257_1440 eb0379a57bc180274fb63b9f344ff82b 816 Gene3D G3DSA:3.40.50.300 432 548 7.8E-6 T 12-10-2018 PA257_1440 eb0379a57bc180274fb63b9f344ff82b 816 SMART SM00382 440 704 6.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1440 eb0379a57bc180274fb63b9f344ff82b 816 Pfam PF05872 Bacterial protein of unknown function (DUF853) 595 685 1.5E-4 T 12-10-2018 IPR033186 Helicase HerA-like C-terminal PA257_1440 eb0379a57bc180274fb63b9f344ff82b 816 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 183 388 1.6E-12 T 12-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 PA257_1440 eb0379a57bc180274fb63b9f344ff82b 816 SUPERFAMILY SSF52540 398 738 4.23E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1440 eb0379a57bc180274fb63b9f344ff82b 816 Gene3D G3DSA:3.40.50.300 557 758 6.8E-24 T 12-10-2018 PA257_4065 b845fcc2defdc154862ad0e9b270a003 295 Pfam PF05844 YopD protein 1 295 2.2E-153 T 12-10-2018 IPR008898 YopD-like PA257_1717 382e2586a745caa8c06a8491be6a5aed 100 Gene3D G3DSA:3.30.370.10 9 94 6.9E-22 T 12-10-2018 IPR035905 Barstar-like superfamily PA257_1717 382e2586a745caa8c06a8491be6a5aed 100 SUPERFAMILY SSF52038 11 94 4.05E-24 T 12-10-2018 IPR035905 Barstar-like superfamily PA257_1717 382e2586a745caa8c06a8491be6a5aed 100 Pfam PF01337 Barstar (barnase inhibitor) 13 90 5.0E-17 T 12-10-2018 IPR000468 Barstar (barnase inhibitor) PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 Gene3D G3DSA:1.25.40.10 42 221 3.0E-34 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 SUPERFAMILY SSF81901 75 205 5.49E-21 T 12-10-2018 PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 SMART SM00671 132 164 55.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 SMART SM00671 58 95 0.012 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 SMART SM00671 165 197 27.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 SMART SM00671 96 131 130.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 Pfam PF08238 Sel1 repeat 149 164 150.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 Pfam PF08238 Sel1 repeat 100 131 180.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 Pfam PF08238 Sel1 repeat 48 57 95.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 Pfam PF08238 Sel1 repeat 169 196 200.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_6378 c06dd8dfb6e1ffd153d1da073f882bc7 273 Pfam PF08238 Sel1 repeat 59 93 2.6E-4 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5237 893767bd85f63699a96d9b77c5a99e39 620 SUPERFAMILY SSF46785 491 616 1.12E-43 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5237 893767bd85f63699a96d9b77c5a99e39 620 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 494 616 8.7E-50 T 12-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal PA257_5237 893767bd85f63699a96d9b77c5a99e39 620 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 26 243 3.8E-87 T 12-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class PA257_5237 893767bd85f63699a96d9b77c5a99e39 620 Pfam PF07514 Putative helicase 27 340 1.9E-126 T 12-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative PA257_5237 893767bd85f63699a96d9b77c5a99e39 620 Gene3D G3DSA:2.40.10.200 511 612 6.5E-26 T 12-10-2018 PA257_5237 893767bd85f63699a96d9b77c5a99e39 620 Gene3D G3DSA:1.10.10.10 495 565 6.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5237 893767bd85f63699a96d9b77c5a99e39 620 Gene3D G3DSA:1.10.3210.40 29 249 1.7E-39 T 12-10-2018 PA257_6590 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Gene3D G3DSA:1.20.5.570 455 488 1.3E-14 T 12-10-2018 PA257_6590 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 2.6E-174 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 PA257_6590 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 4.3E-171 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 PA257_6590 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 SUPERFAMILY SSF143968 323 487 2.35E-66 T 12-10-2018 PA257_6590 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 SUPERFAMILY SSF50475 3 322 3.92E-126 T 12-10-2018 PA257_6590 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 72.005 T 12-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 PA257_6590 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Gene3D G3DSA:3.40.1670.10 337 454 2.0E-52 T 12-10-2018 PA257_0028 847a93a0606dca68a677e2810f62c284 168 PIRSF PIRSF004749 1 168 6.2E-60 T 12-10-2018 IPR023635 Peptide deformylase PA257_0028 847a93a0606dca68a677e2810f62c284 168 Pfam PF01327 Polypeptide deformylase 4 153 6.0E-53 T 12-10-2018 IPR023635 Peptide deformylase PA257_0028 847a93a0606dca68a677e2810f62c284 168 PRINTS PR01576 Peptide deformylase signature 90 101 4.7E-39 T 12-10-2018 IPR023635 Peptide deformylase PA257_0028 847a93a0606dca68a677e2810f62c284 168 PRINTS PR01576 Peptide deformylase signature 102 120 4.7E-39 T 12-10-2018 IPR023635 Peptide deformylase PA257_0028 847a93a0606dca68a677e2810f62c284 168 PRINTS PR01576 Peptide deformylase signature 121 150 4.7E-39 T 12-10-2018 IPR023635 Peptide deformylase PA257_0028 847a93a0606dca68a677e2810f62c284 168 PRINTS PR01576 Peptide deformylase signature 33 62 4.7E-39 T 12-10-2018 IPR023635 Peptide deformylase PA257_0028 847a93a0606dca68a677e2810f62c284 168 SUPERFAMILY SSF56420 2 165 2.09E-64 T 12-10-2018 IPR036821 Peptide deformylase superfamily PA257_0028 847a93a0606dca68a677e2810f62c284 168 Gene3D G3DSA:3.90.45.10 1 168 1.4E-72 T 12-10-2018 IPR036821 Peptide deformylase superfamily PA257_0028 847a93a0606dca68a677e2810f62c284 168 Hamap MF_00163 Peptide deformylase [def]. 2 163 32.206 T 12-10-2018 IPR023635 Peptide deformylase PA257_0028 847a93a0606dca68a677e2810f62c284 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 3.7E-56 T 12-10-2018 IPR023635 Peptide deformylase PA257_6165 2da358b2c1f869800ac49bd23603da30 438 Pfam PF07690 Major Facilitator Superfamily 206 386 1.4E-18 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6165 2da358b2c1f869800ac49bd23603da30 438 SUPERFAMILY SSF103473 8 372 1.57E-41 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6165 2da358b2c1f869800ac49bd23603da30 438 Pfam PF00083 Sugar (and other) transporter 39 158 9.6E-8 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PA257_6165 2da358b2c1f869800ac49bd23603da30 438 Gene3D G3DSA:1.20.1250.20 5 189 3.1E-12 T 12-10-2018 PA257_6165 2da358b2c1f869800ac49bd23603da30 438 Gene3D G3DSA:1.20.1250.20 203 380 1.0E-19 T 12-10-2018 PA257_1383 08fb7efa57598dacfe86be9acb9a73e1 282 Gene3D G3DSA:2.70.70.10 125 282 4.6E-60 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_1383 08fb7efa57598dacfe86be9acb9a73e1 282 SUPERFAMILY SSF51261 85 277 2.62E-49 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_1383 08fb7efa57598dacfe86be9acb9a73e1 282 Gene3D G3DSA:2.60.40.1590 25 124 4.8E-39 T 12-10-2018 PA257_1383 08fb7efa57598dacfe86be9acb9a73e1 282 Pfam PF01551 Peptidase family M23 179 273 9.1E-29 T 12-10-2018 IPR016047 Peptidase M23 PA257_2173 882bdfc6dc1dbdd0cadfba69df983197 125 Gene3D G3DSA:3.30.1330.40 6 122 3.1E-36 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_2173 882bdfc6dc1dbdd0cadfba69df983197 125 Pfam PF01042 Endoribonuclease L-PSP 15 120 8.4E-28 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PA257_2173 882bdfc6dc1dbdd0cadfba69df983197 125 SUPERFAMILY SSF55298 13 124 5.5E-34 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_0244 5c8dde2b62b6fe521955efe33cd15971 306 SUPERFAMILY SSF46785 4 115 8.56E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0244 5c8dde2b62b6fe521955efe33cd15971 306 Gene3D G3DSA:3.40.190.10 95 294 2.8E-78 T 12-10-2018 PA257_0244 5c8dde2b62b6fe521955efe33cd15971 306 Pfam PF03466 LysR substrate binding domain 93 298 8.0E-43 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0244 5c8dde2b62b6fe521955efe33cd15971 306 Gene3D G3DSA:1.10.10.10 1 87 1.3E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0244 5c8dde2b62b6fe521955efe33cd15971 306 SUPERFAMILY SSF53850 94 301 2.17E-40 T 12-10-2018 PA257_0244 5c8dde2b62b6fe521955efe33cd15971 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.8E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0244 5c8dde2b62b6fe521955efe33cd15971 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.7E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0244 5c8dde2b62b6fe521955efe33cd15971 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.7E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0244 5c8dde2b62b6fe521955efe33cd15971 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.7E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0244 5c8dde2b62b6fe521955efe33cd15971 306 Gene3D G3DSA:3.40.190.10 165 271 2.8E-78 T 12-10-2018 PA257_0641 30e9e1822353b58665509c610b03dd0b 240 SUPERFAMILY SSF53474 5 236 2.77E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0641 30e9e1822353b58665509c610b03dd0b 240 Gene3D G3DSA:3.40.50.1820 2 236 8.5E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0641 30e9e1822353b58665509c610b03dd0b 240 Pfam PF12697 Alpha/beta hydrolase family 20 229 4.3E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_1128 14c9598ccbcb0e0be0884f1d7c863305 464 Gene3D G3DSA:2.30.170.30 3 55 6.5E-23 T 12-10-2018 PA257_1128 14c9598ccbcb0e0be0884f1d7c863305 464 Gene3D G3DSA:3.20.20.70 143 452 9.3E-151 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1128 14c9598ccbcb0e0be0884f1d7c863305 464 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 13 442 1.2E-220 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 PA257_1128 14c9598ccbcb0e0be0884f1d7c863305 464 Gene3D G3DSA:1.10.220.70 56 142 3.1E-33 T 12-10-2018 PA257_1128 14c9598ccbcb0e0be0884f1d7c863305 464 PIRSF PIRSF018788 2 461 2.5E-241 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 Gene3D G3DSA:2.30.110.50 21 328 1.4E-79 T 12-10-2018 PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 SUPERFAMILY SSF69349 442 493 1.41E-9 T 12-10-2018 PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 SUPERFAMILY SSF69255 364 451 1.02E-33 T 12-10-2018 PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 Gene3D G3DSA:3.30.1920.30 221 284 1.4E-79 T 12-10-2018 PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 502 9.8E-121 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 475 581 7.1E-34 T 12-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 Pfam PF05954 Phage late control gene D protein (GPD) 27 327 2.8E-75 T 12-10-2018 PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 SUPERFAMILY SSF69279 9 182 1.11E-47 T 12-10-2018 PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 Gene3D G3DSA:3.55.50.10 96 187 1.4E-79 T 12-10-2018 PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 Gene3D G3DSA:2.40.50.230 358 456 1.9E-41 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 493 1.1E-160 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 615 759 5.2E-49 T 12-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PA257_4280 b8a2dd2188d4497d72cedd87c790e021 842 SUPERFAMILY SSF69279 197 365 8.33E-32 T 12-10-2018 PA257_3863 44432550916ff220b41b9102b2c6573a 788 SMART SM00486 151 558 1.6E-62 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_3863 44432550916ff220b41b9102b2c6573a 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 418 431 7.1E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_3863 44432550916ff220b41b9102b2c6573a 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 7.1E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_3863 44432550916ff220b41b9102b2c6573a 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 7.1E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_3863 44432550916ff220b41b9102b2c6573a 788 SUPERFAMILY SSF56672 388 782 2.78E-113 T 12-10-2018 PA257_3863 44432550916ff220b41b9102b2c6573a 788 Gene3D G3DSA:3.90.1600.10 451 637 6.6E-55 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_3863 44432550916ff220b41b9102b2c6573a 788 Gene3D G3DSA:3.90.1600.10 351 447 7.5E-30 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_3863 44432550916ff220b41b9102b2c6573a 788 Gene3D G3DSA:1.10.132.60 644 788 2.2E-58 T 12-10-2018 PA257_3863 44432550916ff220b41b9102b2c6573a 788 Gene3D G3DSA:2.40.50.590 7 151 6.2E-53 T 12-10-2018 PA257_3863 44432550916ff220b41b9102b2c6573a 788 Pfam PF00136 DNA polymerase family B 380 741 5.3E-39 T 12-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_3863 44432550916ff220b41b9102b2c6573a 788 Gene3D G3DSA:3.30.70.2250 42 108 6.2E-53 T 12-10-2018 PA257_3863 44432550916ff220b41b9102b2c6573a 788 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 299 1.7E-11 T 12-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_3863 44432550916ff220b41b9102b2c6573a 788 SUPERFAMILY SSF53098 6 392 7.59E-95 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_3863 44432550916ff220b41b9102b2c6573a 788 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 12-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_3863 44432550916ff220b41b9102b2c6573a 788 Gene3D G3DSA:3.30.420.10 154 350 3.5E-74 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_2670 af94e70ff67304009baba9017442898b 193 SUPERFAMILY SSF109604 29 103 1.41E-8 T 12-10-2018 PA257_2670 af94e70ff67304009baba9017442898b 193 Pfam PF01966 HD domain 32 91 2.8E-8 T 12-10-2018 IPR006674 HD domain PA257_2670 af94e70ff67304009baba9017442898b 193 Gene3D G3DSA:1.10.3210.10 2 189 2.3E-59 T 12-10-2018 PA257_2670 af94e70ff67304009baba9017442898b 193 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 7 180 8.2E-76 T 12-10-2018 IPR017670 Phosphonate degradation operon associated HDIG domain protein PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 SUPERFAMILY SSF102114 3 312 9.42E-76 T 12-10-2018 PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 246 330 1.8E-8 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 Pfam PF13186 Iron-sulfur cluster-binding domain 238 303 9.8E-8 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 11 22 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 Pfam PF04055 Radical SAM superfamily 11 166 1.3E-22 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 Gene3D G3DSA:3.20.20.70 6 290 2.2E-47 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 370 197.815 T 12-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 PIRSF PIRSF037420 1 350 3.4E-127 T 12-10-2018 IPR017200 Coenzyme PQQ synthesis protein E PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 1 360 1.7E-188 T 12-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 SMART SM00729 5 208 8.5E-5 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_3750 8d114548bfd11911f13b5435c4c8ff27 370 Pfam PF13353 4Fe-4S single cluster domain 12 95 2.4E-6 T 12-10-2018 PA257_3827 d6fb1c9bbddd7fd8e2f621b6e06fb3f2 229 Gene3D G3DSA:3.30.9.10 19 121 1.7E-21 T 12-10-2018 PA257_3827 d6fb1c9bbddd7fd8e2f621b6e06fb3f2 229 Pfam PF01266 FAD dependent oxidoreductase 1 159 6.2E-14 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_3827 d6fb1c9bbddd7fd8e2f621b6e06fb3f2 229 Gene3D G3DSA:3.50.50.60 1 159 1.7E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3827 d6fb1c9bbddd7fd8e2f621b6e06fb3f2 229 SUPERFAMILY SSF51971 1 166 3.06E-6 T 12-10-2018 PA257_6865 ad9198038a3e97e8f6b56f8903096e74 139 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 113 9.5E-19 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PA257_6865 ad9198038a3e97e8f6b56f8903096e74 139 SUPERFAMILY SSF51316 1 130 3.45E-41 T 12-10-2018 IPR011057 Mss4-like superfamily PA257_6865 ad9198038a3e97e8f6b56f8903096e74 139 Gene3D G3DSA:2.170.150.70 6 114 4.7E-17 T 12-10-2018 PA257_2541 842f33aa9552cbf22d4324e8e53b164b 111 SUPERFAMILY SSF54909 12 105 3.0E-22 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_2541 842f33aa9552cbf22d4324e8e53b164b 111 Gene3D G3DSA:3.30.70.100 9 106 1.1E-23 T 12-10-2018 PA257_2541 842f33aa9552cbf22d4324e8e53b164b 111 Pfam PF07045 Domain of unknown function (DUF1330) 12 105 1.8E-24 T 12-10-2018 IPR010753 Domain of unknown function DUF1330 PA257_5186 aaee73a23dd862982873443ca87eace9 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 62 3.5E-25 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA PA257_1189 dd489196d53138eeafbe766819b3b55f 169 Pfam PF13412 Winged helix-turn-helix DNA-binding 14 60 3.7E-23 T 12-10-2018 PA257_1189 dd489196d53138eeafbe766819b3b55f 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 41 3.2E-19 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_1189 dd489196d53138eeafbe766819b3b55f 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 60 3.2E-19 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_1189 dd489196d53138eeafbe766819b3b55f 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 14 30 3.2E-19 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_1189 dd489196d53138eeafbe766819b3b55f 169 Gene3D G3DSA:3.30.70.920 67 152 3.2E-27 T 12-10-2018 PA257_1189 dd489196d53138eeafbe766819b3b55f 169 SMART SM00344 14 124 2.0E-43 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PA257_1189 dd489196d53138eeafbe766819b3b55f 169 Pfam PF01037 Lrp/AsnC ligand binding domain 80 155 1.9E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PA257_1189 dd489196d53138eeafbe766819b3b55f 169 ProSitePatterns PS00519 AsnC-type HTH domain signature. 32 58 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PA257_1189 dd489196d53138eeafbe766819b3b55f 169 Gene3D G3DSA:1.10.10.10 15 66 4.8E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1189 dd489196d53138eeafbe766819b3b55f 169 SUPERFAMILY SSF46785 5 132 3.13E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4372 50d7b29e9f337b2b331d5a31e172e4ad 297 Gene3D G3DSA:3.40.190.290 95 296 3.8E-21 T 12-10-2018 PA257_4372 50d7b29e9f337b2b331d5a31e172e4ad 297 SUPERFAMILY SSF53850 93 294 4.5E-35 T 12-10-2018 PA257_4372 50d7b29e9f337b2b331d5a31e172e4ad 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.4E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4372 50d7b29e9f337b2b331d5a31e172e4ad 297 Gene3D G3DSA:1.10.10.10 7 92 8.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4372 50d7b29e9f337b2b331d5a31e172e4ad 297 Pfam PF03466 LysR substrate binding domain 92 294 2.5E-37 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4372 50d7b29e9f337b2b331d5a31e172e4ad 297 SUPERFAMILY SSF46785 5 83 1.76E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6329 5d23822e4d8ba5fd5ed89acc98434901 368 Gene3D G3DSA:1.20.1090.10 171 359 7.4E-62 T 12-10-2018 PA257_6329 5d23822e4d8ba5fd5ed89acc98434901 368 Pfam PF01761 3-dehydroquinate synthase 65 323 3.5E-108 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PA257_6329 5d23822e4d8ba5fd5ed89acc98434901 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 348 3.3E-115 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PA257_6329 5d23822e4d8ba5fd5ed89acc98434901 368 SUPERFAMILY SSF56796 3 354 1.7E-119 T 12-10-2018 PA257_6329 5d23822e4d8ba5fd5ed89acc98434901 368 PIRSF PIRSF001455 3 359 2.0E-106 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PA257_6329 5d23822e4d8ba5fd5ed89acc98434901 368 Gene3D G3DSA:3.40.50.1970 1 170 1.4E-66 T 12-10-2018 PA257_6329 5d23822e4d8ba5fd5ed89acc98434901 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 358 72.777 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PA257_1299 a1fdb6055b0e7b20cf0f3bbcd22242d2 263 SMART SM00062 30 259 3.8E-73 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1299 a1fdb6055b0e7b20cf0f3bbcd22242d2 263 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 10 256 1.3E-81 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 PA257_1299 a1fdb6055b0e7b20cf0f3bbcd22242d2 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 257 1.9E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1299 a1fdb6055b0e7b20cf0f3bbcd22242d2 263 Gene3D G3DSA:3.40.190.10 116 216 1.6E-76 T 12-10-2018 PA257_1299 a1fdb6055b0e7b20cf0f3bbcd22242d2 263 Gene3D G3DSA:3.40.190.10 32 255 1.6E-76 T 12-10-2018 PA257_1299 a1fdb6055b0e7b20cf0f3bbcd22242d2 263 SUPERFAMILY SSF53850 13 260 3.26E-66 T 12-10-2018 PA257_5138 02d71d074e42a0534186864c05d50273 305 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 175 2.4E-31 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_5138 02d71d074e42a0534186864c05d50273 305 Gene3D G3DSA:3.40.50.300 11 190 2.0E-51 T 12-10-2018 PA257_5138 02d71d074e42a0534186864c05d50273 305 Pfam PF07650 KH domain 215 290 9.8E-21 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_5138 02d71d074e42a0534186864c05d50273 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 17 37 2.3E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5138 02d71d074e42a0534186864c05d50273 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 66 81 2.3E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5138 02d71d074e42a0534186864c05d50273 305 Hamap MF_00367 GTPase Era [era]. 12 302 36.228 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5138 02d71d074e42a0534186864c05d50273 305 Gene3D G3DSA:3.30.300.20 192 303 1.2E-41 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_5138 02d71d074e42a0534186864c05d50273 305 TIGRFAM TIGR00436 era: GTP-binding protein Era 15 285 4.5E-100 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5138 02d71d074e42a0534186864c05d50273 305 SUPERFAMILY SSF54814 188 302 3.92E-42 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PA257_5138 02d71d074e42a0534186864c05d50273 305 Pfam PF01926 50S ribosome-binding GTPase 17 131 1.5E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_5138 02d71d074e42a0534186864c05d50273 305 SUPERFAMILY SSF52540 17 210 8.83E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0535 0e05171ed5d3c56225f908cc886d5be3 394 PIRSF PIRSF001434 1 394 1.4E-147 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PA257_0535 0e05171ed5d3c56225f908cc886d5be3 394 Gene3D G3DSA:3.90.1150.10 260 394 1.2E-59 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_0535 0e05171ed5d3c56225f908cc886d5be3 394 Gene3D G3DSA:3.40.640.10 13 259 1.6E-93 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_0535 0e05171ed5d3c56225f908cc886d5be3 394 SUPERFAMILY SSF53383 17 393 5.32E-121 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_0535 0e05171ed5d3c56225f908cc886d5be3 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PA257_0535 0e05171ed5d3c56225f908cc886d5be3 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 17 391 5.9E-153 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PA257_5151 815fdde37e4fc581af806cc8da99eec0 314 Gene3D G3DSA:3.30.70.1400 13 99 7.1E-34 T 12-10-2018 PA257_5151 815fdde37e4fc581af806cc8da99eec0 314 Gene3D G3DSA:3.30.70.1630 101 174 7.1E-34 T 12-10-2018 PA257_5151 815fdde37e4fc581af806cc8da99eec0 314 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 171 235 9.2E-26 T 12-10-2018 IPR017703 YgfZ/GcvT conserved site PA257_5151 815fdde37e4fc581af806cc8da99eec0 314 SUPERFAMILY SSF101790 228 307 3.86E-14 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PA257_5151 815fdde37e4fc581af806cc8da99eec0 314 Gene3D G3DSA:2.40.30.160 180 294 9.7E-33 T 12-10-2018 PA257_5151 815fdde37e4fc581af806cc8da99eec0 314 SUPERFAMILY SSF103025 4 225 2.35E-53 T 12-10-2018 PA257_2514 f2387a0f12bfe7652a427374d52d69e1 137 SMART SM00530 76 131 1.4E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_2514 f2387a0f12bfe7652a427374d52d69e1 137 Pfam PF01381 Helix-turn-helix 79 125 2.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_2514 f2387a0f12bfe7652a427374d52d69e1 137 Gene3D G3DSA:1.10.260.40 69 131 2.3E-11 T 12-10-2018 PA257_2514 f2387a0f12bfe7652a427374d52d69e1 137 SUPERFAMILY SSF47413 73 128 7.35E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_3254 66302f33fcdedfee167a81d4722ea29c 443 Gene3D G3DSA:3.50.50.60 9 443 7.6E-158 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3254 66302f33fcdedfee167a81d4722ea29c 443 SUPERFAMILY SSF51905 11 267 6.19E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3254 66302f33fcdedfee167a81d4722ea29c 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 9.2E-5 T 12-10-2018 PA257_3254 66302f33fcdedfee167a81d4722ea29c 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 9.2E-5 T 12-10-2018 PA257_3254 66302f33fcdedfee167a81d4722ea29c 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 209 227 9.2E-5 T 12-10-2018 PA257_3254 66302f33fcdedfee167a81d4722ea29c 443 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 10 357 3.5E-121 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase PA257_3254 66302f33fcdedfee167a81d4722ea29c 443 SUPERFAMILY SSF51905 207 391 3.02E-5 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1271 1c8b8c572e145ac1462cff449bca48c4 66 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 1.1E-22 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 PA257_5457 bd277555427adfd537c0e8f677ac7774 323 Pfam PF04338 Protein of unknown function, DUF481 121 323 1.0E-31 T 12-10-2018 IPR007433 Protein of unknown function DUF481 PA257_3846 edeb5f5608a4048e3428d3e05bdaec43 405 Pfam PF01474 Class-II DAHP synthetase family 160 384 1.0E-77 T 12-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PA257_3846 edeb5f5608a4048e3428d3e05bdaec43 405 SUPERFAMILY SSF51569 4 390 9.52E-144 T 12-10-2018 PA257_3846 edeb5f5608a4048e3428d3e05bdaec43 405 Gene3D G3DSA:3.20.20.70 36 392 4.5E-139 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_3544 07e26d4eb5246711fb3b996fb8cca313 458 SMART SM01236 131 228 1.4E-27 T 12-10-2018 PA257_3544 07e26d4eb5246711fb3b996fb8cca313 458 Gene3D G3DSA:1.20.910.10 94 270 3.7E-12 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_3544 07e26d4eb5246711fb3b996fb8cca313 458 Pfam PF14518 Iron-containing redox enzyme 100 264 2.0E-32 T 12-10-2018 PA257_2323 a3765bf7e63000b810e5f9d77c8d4469 332 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 27 313 1.9E-79 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 PA257_2323 a3765bf7e63000b810e5f9d77c8d4469 332 SUPERFAMILY SSF52540 53 191 7.98E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2323 a3765bf7e63000b810e5f9d77c8d4469 332 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 326 1.0E-106 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 PA257_2323 a3765bf7e63000b810e5f9d77c8d4469 332 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 331 39.252 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 PA257_0495 889cbbc5c027fa7ecf353f2371e3dac3 76 Pfam PF10124 Mu-like prophage major head subunit gpT 6 72 5.2E-24 T 12-10-2018 IPR018774 Bacteriophage Mu, GpT PA257_3803 392d09edfc8258a393c03f4daebcf498 379 Pfam PF00199 Catalase 73 324 2.0E-11 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3803 392d09edfc8258a393c03f4daebcf498 379 Gene3D G3DSA:2.40.180.20 88 357 2.8E-30 T 12-10-2018 PA257_3803 392d09edfc8258a393c03f4daebcf498 379 Gene3D G3DSA:1.20.1280.120 71 368 2.8E-30 T 12-10-2018 PA257_3803 392d09edfc8258a393c03f4daebcf498 379 SUPERFAMILY SSF56634 25 378 2.88E-85 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PA257_3799 01283ae6db078c0df049411c5db86838 495 Pfam PF08443 RimK-like ATP-grasp domain 286 463 3.9E-9 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 PA257_3799 01283ae6db078c0df049411c5db86838 495 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 177 6.7E-49 T 12-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain PA257_3799 01283ae6db078c0df049411c5db86838 495 Gene3D G3DSA:3.30.1490.20 287 370 6.6E-8 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_3799 01283ae6db078c0df049411c5db86838 495 Gene3D G3DSA:3.30.470.20 371 486 1.3E-18 T 12-10-2018 PA257_3799 01283ae6db078c0df049411c5db86838 495 SUPERFAMILY SSF56059 277 484 6.51E-39 T 12-10-2018 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 SUPERFAMILY SSF49503 108 249 9.37E-54 T 12-10-2018 IPR008972 Cupredoxin PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 15 96 7.0E-13 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 PRINTS PR01166 Cytochrome c oxidase subunit II signature 73 85 1.2E-39 T 12-10-2018 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 PRINTS PR01166 Cytochrome c oxidase subunit II signature 178 198 1.2E-39 T 12-10-2018 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 PRINTS PR01166 Cytochrome c oxidase subunit II signature 154 175 1.2E-39 T 12-10-2018 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 105 1.2E-39 T 12-10-2018 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 PRINTS PR01166 Cytochrome c oxidase subunit II signature 107 126 1.2E-39 T 12-10-2018 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 PRINTS PR01166 Cytochrome c oxidase subunit II signature 216 233 1.2E-39 T 12-10-2018 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 PRINTS PR01166 Cytochrome c oxidase subunit II signature 198 215 1.2E-39 T 12-10-2018 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 Gene3D G3DSA:2.60.40.420 107 244 3.0E-82 T 12-10-2018 IPR008972 Cupredoxin PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 SUPERFAMILY SSF46626 213 350 9.46E-24 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 Gene3D G3DSA:1.10.760.10 247 366 5.1E-28 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 SUPERFAMILY SSF81464 4 104 4.58E-25 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 113 232 7.1E-37 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 Gene3D G3DSA:1.10.287.90 35 106 3.0E-82 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 24 243 3.8E-59 T 12-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 266 340 1.2E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0128 bceafe0fe40e80c4a775d5413969a4db 366 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 179 227 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0639 8a05e06a82f26251cd4b400b848d5c77 352 PIRSF PIRSF001619 1 325 3.0E-136 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PA257_0639 8a05e06a82f26251cd4b400b848d5c77 352 Pfam PF04055 Radical SAM superfamily 56 207 4.2E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_0639 8a05e06a82f26251cd4b400b848d5c77 352 Gene3D G3DSA:3.20.20.70 10 321 2.3E-132 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0639 8a05e06a82f26251cd4b400b848d5c77 352 SMART SM00876 226 318 4.6E-47 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PA257_0639 8a05e06a82f26251cd4b400b848d5c77 352 SMART SM00729 49 261 3.6E-39 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_0639 8a05e06a82f26251cd4b400b848d5c77 352 SUPERFAMILY SSF102114 11 320 1.26E-92 T 12-10-2018 PA257_0639 8a05e06a82f26251cd4b400b848d5c77 352 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 226 316 1.1E-20 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PA257_0639 8a05e06a82f26251cd4b400b848d5c77 352 TIGRFAM TIGR00433 bioB: biotin synthase 21 316 9.6E-125 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PA257_0639 8a05e06a82f26251cd4b400b848d5c77 352 Hamap MF_01694 Biotin synthase [bioB]. 11 319 41.837 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PA257_3122 91d6a33ddff3b3ca2315c3af94cfa5cf 530 SUPERFAMILY SSF53474 282 512 1.54E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3122 91d6a33ddff3b3ca2315c3af94cfa5cf 530 Pfam PF00756 Putative esterase 300 512 5.2E-32 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 PA257_3122 91d6a33ddff3b3ca2315c3af94cfa5cf 530 Pfam PF11806 Domain of unknown function (DUF3327) 171 281 1.2E-18 T 12-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 PA257_3122 91d6a33ddff3b3ca2315c3af94cfa5cf 530 SUPERFAMILY SSF81296 146 277 1.09E-18 T 12-10-2018 IPR014756 Immunoglobulin E-set PA257_3122 91d6a33ddff3b3ca2315c3af94cfa5cf 530 Gene3D G3DSA:3.40.50.1820 274 520 3.6E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3122 91d6a33ddff3b3ca2315c3af94cfa5cf 530 Gene3D G3DSA:2.60.40.10 142 265 5.6E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_1045 c4d2dbc4799a702a11e093605cc4176c 291 Pfam PF03466 LysR substrate binding domain 85 281 6.7E-37 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1045 c4d2dbc4799a702a11e093605cc4176c 291 SUPERFAMILY SSF46785 3 108 5.44E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1045 c4d2dbc4799a702a11e093605cc4176c 291 SUPERFAMILY SSF53850 87 281 1.76E-31 T 12-10-2018 PA257_1045 c4d2dbc4799a702a11e093605cc4176c 291 Gene3D G3DSA:1.10.10.10 1 90 7.5E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1045 c4d2dbc4799a702a11e093605cc4176c 291 Gene3D G3DSA:3.40.190.290 91 288 7.3E-27 T 12-10-2018 PA257_1045 c4d2dbc4799a702a11e093605cc4176c 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.8E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5610 ee6ffc3010f0c9c189844c22af604b10 149 SUPERFAMILY SSF50800 4 143 6.28E-34 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PA257_5610 ee6ffc3010f0c9c189844c22af604b10 149 Pfam PF03473 MOSC domain 39 140 4.3E-6 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PA257_5610 ee6ffc3010f0c9c189844c22af604b10 149 Gene3D G3DSA:2.40.33.20 9 149 2.6E-17 T 12-10-2018 PA257_3657 7f75566f48b86f2232e79e792c792fc6 316 SUPERFAMILY SSF53850 102 310 2.17E-16 T 12-10-2018 PA257_3657 7f75566f48b86f2232e79e792c792fc6 316 SUPERFAMILY SSF46785 10 113 9.53E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3657 7f75566f48b86f2232e79e792c792fc6 316 Gene3D G3DSA:3.40.190.10 178 285 5.7E-16 T 12-10-2018 PA257_3657 7f75566f48b86f2232e79e792c792fc6 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 79 1.5E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3657 7f75566f48b86f2232e79e792c792fc6 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 8.4E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3657 7f75566f48b86f2232e79e792c792fc6 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 8.4E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3657 7f75566f48b86f2232e79e792c792fc6 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 8.4E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3657 7f75566f48b86f2232e79e792c792fc6 316 Gene3D G3DSA:3.40.190.10 109 291 5.7E-16 T 12-10-2018 PA257_3657 7f75566f48b86f2232e79e792c792fc6 316 Gene3D G3DSA:1.10.10.10 17 105 2.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3657 7f75566f48b86f2232e79e792c792fc6 316 Pfam PF03466 LysR substrate binding domain 102 313 5.9E-23 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1837 c8bf9b172eb7366d76e4d004e5981a9a 150 SUPERFAMILY SSF52218 1 148 8.55E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_1837 c8bf9b172eb7366d76e4d004e5981a9a 150 Gene3D G3DSA:3.40.50.360 1 149 1.5E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_1837 c8bf9b172eb7366d76e4d004e5981a9a 150 PRINTS PR00369 Flavodoxin signature 108 127 2.9E-5 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PA257_1837 c8bf9b172eb7366d76e4d004e5981a9a 150 PRINTS PR00369 Flavodoxin signature 52 63 2.9E-5 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PA257_1837 c8bf9b172eb7366d76e4d004e5981a9a 150 PRINTS PR00369 Flavodoxin signature 83 93 2.9E-5 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PA257_1837 c8bf9b172eb7366d76e4d004e5981a9a 150 PRINTS PR00369 Flavodoxin signature 4 17 2.9E-5 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PA257_1837 c8bf9b172eb7366d76e4d004e5981a9a 150 Pfam PF00258 Flavodoxin 5 140 8.0E-20 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PA257_6236 9d9d0ec2ecd9b318caaa03b1e325f89a 347 SUPERFAMILY SSF103088 171 277 1.16E-22 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_6236 9d9d0ec2ecd9b318caaa03b1e325f89a 347 Gene3D G3DSA:3.30.1330.60 112 291 4.7E-53 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_6236 9d9d0ec2ecd9b318caaa03b1e325f89a 347 Pfam PF00691 OmpA family 174 264 4.0E-14 T 12-10-2018 IPR006665 OmpA-like domain PA257_6236 9d9d0ec2ecd9b318caaa03b1e325f89a 347 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 15 63 3.1E-17 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain PA257_5058 a710f43dc68280f6365647478dc3b52f 254 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 14 96 5.1E-14 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family PA257_2680 fd2fc6619cc590eb8999c6214defd273 370 Gene3D G3DSA:1.10.443.10 171 339 1.6E-22 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_2680 fd2fc6619cc590eb8999c6214defd273 370 Pfam PF00589 Phage integrase family 174 331 4.0E-18 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_2680 fd2fc6619cc590eb8999c6214defd273 370 SUPERFAMILY SSF56349 57 332 7.06E-38 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_5757 6d60722ca0069c0d76420a6e828504b9 531 PIRSF PIRSF037354 1 531 1.8E-299 T 12-10-2018 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 PA257_5757 6d60722ca0069c0d76420a6e828504b9 531 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 279 294 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_5757 6d60722ca0069c0d76420a6e828504b9 531 Pfam PF00158 Sigma-54 interaction domain 190 358 1.1E-49 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_5757 6d60722ca0069c0d76420a6e828504b9 531 Gene3D G3DSA:3.40.50.300 175 364 2.5E-49 T 12-10-2018 PA257_5757 6d60722ca0069c0d76420a6e828504b9 531 SMART SM00382 210 356 3.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5757 6d60722ca0069c0d76420a6e828504b9 531 Gene3D G3DSA:1.10.8.60 366 444 7.5E-7 T 12-10-2018 PA257_5757 6d60722ca0069c0d76420a6e828504b9 531 SUPERFAMILY SSF52540 190 441 3.17E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5757 6d60722ca0069c0d76420a6e828504b9 531 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 2 188 8.5E-87 T 12-10-2018 IPR009715 Regulator of RNA terminal phosphate cyclase PA257_5392 4bf301fa38b15b6e04c6815b800439e7 304 Gene3D G3DSA:3.40.50.12370 1 303 3.1E-76 T 12-10-2018 PA257_5392 4bf301fa38b15b6e04c6815b800439e7 304 Pfam PF00582 Universal stress protein family 177 299 2.5E-15 T 12-10-2018 IPR006016 UspA PA257_5392 4bf301fa38b15b6e04c6815b800439e7 304 Pfam PF00582 Universal stress protein family 4 145 1.1E-14 T 12-10-2018 IPR006016 UspA PA257_5392 4bf301fa38b15b6e04c6815b800439e7 304 SUPERFAMILY SSF52402 163 300 3.77E-15 T 12-10-2018 PA257_5392 4bf301fa38b15b6e04c6815b800439e7 304 SUPERFAMILY SSF52402 1 147 2.18E-22 T 12-10-2018 PA257_6122 fc0d747fc3254ba82f4319ee979026f0 147 Pfam PF01220 Dehydroquinase class II 4 140 1.6E-60 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_6122 fc0d747fc3254ba82f4319ee979026f0 147 Gene3D G3DSA:3.40.50.9100 1 145 3.6E-66 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_6122 fc0d747fc3254ba82f4319ee979026f0 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_6122 fc0d747fc3254ba82f4319ee979026f0 147 SUPERFAMILY SSF52304 3 145 2.75E-63 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_6122 fc0d747fc3254ba82f4319ee979026f0 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 143 8.4E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_6122 fc0d747fc3254ba82f4319ee979026f0 147 PIRSF PIRSF001399 1 146 1.4E-58 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_6122 fc0d747fc3254ba82f4319ee979026f0 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 75.469 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_6122 fc0d747fc3254ba82f4319ee979026f0 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 143 3.0E-69 T 12-10-2018 PA257_1711 cd60021924a1bbf5e038ed5250cfc7bf 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 4.6E-279 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 PA257_1711 cd60021924a1bbf5e038ed5250cfc7bf 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_1711 cd60021924a1bbf5e038ed5250cfc7bf 497 Gene3D G3DSA:3.40.605.10 25 458 4.2E-142 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_1711 cd60021924a1bbf5e038ed5250cfc7bf 497 SUPERFAMILY SSF53720 3 483 3.14E-145 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_1711 cd60021924a1bbf5e038ed5250cfc7bf 497 Pfam PF00171 Aldehyde dehydrogenase family 18 477 1.9E-136 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_1711 cd60021924a1bbf5e038ed5250cfc7bf 497 Gene3D G3DSA:3.40.309.10 250 450 4.2E-142 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_6140 7cc3edcabf4c845007702c4922ebaaa5 150 Pfam PF00583 Acetyltransferase (GNAT) family 35 129 7.8E-14 T 12-10-2018 IPR000182 GNAT domain PA257_6140 7cc3edcabf4c845007702c4922ebaaa5 150 Gene3D G3DSA:3.40.630.30 1 150 1.4E-26 T 12-10-2018 PA257_6140 7cc3edcabf4c845007702c4922ebaaa5 150 SUPERFAMILY SSF55729 1 149 8.61E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6350 e5ed5a90e3e4d76625e4e0579c8d5c58 560 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 75 243 2.3E-65 T 12-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 PA257_6350 e5ed5a90e3e4d76625e4e0579c8d5c58 560 Gene3D G3DSA:3.40.50.1820 204 487 6.5E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6350 e5ed5a90e3e4d76625e4e0579c8d5c58 560 SUPERFAMILY SSF53474 201 492 5.93E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6350 e5ed5a90e3e4d76625e4e0579c8d5c58 560 TIGRFAM TIGR01839 PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II 1 560 0.0 T 12-10-2018 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II GO:0016746|GO:0042619 PA257_2115 51ca7e49ee6257436a9da6b1e9a60625 283 Pfam PF01263 Aldose 1-epimerase 29 277 9.9E-31 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PA257_2115 51ca7e49ee6257436a9da6b1e9a60625 283 PIRSF PIRSF016020 3 283 4.6E-89 T 12-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 PA257_2115 51ca7e49ee6257436a9da6b1e9a60625 283 Gene3D G3DSA:2.70.98.10 14 280 2.2E-44 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 PA257_2115 51ca7e49ee6257436a9da6b1e9a60625 283 SUPERFAMILY SSF74650 18 277 4.65E-50 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PA257_2606 ffd49591eeeb3514fe16a61750579156 142 Pfam PF02525 Flavodoxin-like fold 7 126 2.5E-25 T 12-10-2018 IPR003680 Flavodoxin-like fold PA257_2606 ffd49591eeeb3514fe16a61750579156 142 SUPERFAMILY SSF52218 3 129 1.11E-29 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_2606 ffd49591eeeb3514fe16a61750579156 142 Gene3D G3DSA:3.40.50.360 1 131 1.4E-31 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_4327 882b79a8b707c80cb005f7993e255d5b 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 19 76 1.9E-6 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_4327 882b79a8b707c80cb005f7993e255d5b 228 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 193 2.4E-13 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_4327 882b79a8b707c80cb005f7993e255d5b 228 Gene3D G3DSA:3.40.30.10 6 196 3.3E-42 T 12-10-2018 PA257_4327 882b79a8b707c80cb005f7993e255d5b 228 SUPERFAMILY SSF52833 4 77 7.78E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4327 882b79a8b707c80cb005f7993e255d5b 228 SUPERFAMILY SSF47616 85 202 6.26E-20 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_4327 882b79a8b707c80cb005f7993e255d5b 228 Gene3D G3DSA:1.20.1050.10 83 192 3.3E-42 T 12-10-2018 PA257_0015 81dd811d385bf899ab81dd043ca79661 257 SMART SM00563 76 190 3.8E-31 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_0015 81dd811d385bf899ab81dd043ca79661 257 SUPERFAMILY SSF69593 15 240 4.58E-36 T 12-10-2018 PA257_0015 81dd811d385bf899ab81dd043ca79661 257 Pfam PF01553 Acyltransferase 63 187 8.8E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_6770 c54f6f929fafdc81b3c66d23e8cb92ff 534 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 511 3.9E-169 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 PA257_6770 c54f6f929fafdc81b3c66d23e8cb92ff 534 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 512 1.4E-148 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 PA257_0098 a3b5f1cbb03653e428a3b50f5ec37674 449 Gene3D G3DSA:1.25.40.590 63 221 2.9E-54 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily PA257_0098 a3b5f1cbb03653e428a3b50f5ec37674 449 SUPERFAMILY SSF103088 328 443 6.15E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_0098 a3b5f1cbb03653e428a3b50f5ec37674 449 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 66 275 1.2E-72 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU PA257_0098 a3b5f1cbb03653e428a3b50f5ec37674 449 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 307 443 1.7E-53 T 12-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain PA257_0098 a3b5f1cbb03653e428a3b50f5ec37674 449 Pfam PF09850 Type VI secretion system protein DotU 67 269 7.8E-69 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU PA257_0098 a3b5f1cbb03653e428a3b50f5ec37674 449 Pfam PF00691 OmpA family 339 437 1.6E-15 T 12-10-2018 IPR006665 OmpA-like domain PA257_0098 a3b5f1cbb03653e428a3b50f5ec37674 449 Gene3D G3DSA:3.30.1330.60 295 449 8.3E-56 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_1659 4c8a04745a07ea962dd2b7858ace3c21 356 Gene3D G3DSA:3.40.50.450 62 328 2.5E-55 T 12-10-2018 PA257_1659 4c8a04745a07ea962dd2b7858ace3c21 356 Pfam PF03641 Possible lysine decarboxylase 131 263 3.5E-29 T 12-10-2018 IPR031100 LOG family PA257_1659 4c8a04745a07ea962dd2b7858ace3c21 356 SUPERFAMILY SSF102405 68 263 6.87E-47 T 12-10-2018 PA257_3855 039373c79e18ee913ea49659357a7320 809 Gene3D G3DSA:2.30.120.10 326 403 4.0E-154 T 12-10-2018 PA257_3855 039373c79e18ee913ea49659357a7320 809 Gene3D G3DSA:1.10.439.10 33 181 8.0E-47 T 12-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 PA257_3855 039373c79e18ee913ea49659357a7320 809 Gene3D G3DSA:3.60.20.10 254 778 4.0E-154 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_3855 039373c79e18ee913ea49659357a7320 809 Gene3D G3DSA:1.10.1400.10 556 687 4.0E-154 T 12-10-2018 PA257_3855 039373c79e18ee913ea49659357a7320 809 PIRSF PIRSF001227 19 794 1.3E-170 T 12-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 PA257_3855 039373c79e18ee913ea49659357a7320 809 SUPERFAMILY SSF56235 44 790 2.11E-194 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_3855 039373c79e18ee913ea49659357a7320 809 Pfam PF01804 Penicillin amidase 50 783 1.4E-197 T 12-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 PA257_5466 c03bd771bb5ec5acb9927ea9c31cea44 315 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PA257_5466 c03bd771bb5ec5acb9927ea9c31cea44 315 Gene3D G3DSA:3.90.79.10 2 126 1.8E-40 T 12-10-2018 PA257_5466 c03bd771bb5ec5acb9927ea9c31cea44 315 PRINTS PR00502 NUDIX hydrolase family signature 47 62 7.0E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PA257_5466 c03bd771bb5ec5acb9927ea9c31cea44 315 PRINTS PR00502 NUDIX hydrolase family signature 33 47 7.0E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PA257_5466 c03bd771bb5ec5acb9927ea9c31cea44 315 Pfam PF14815 NUDIX domain 8 124 2.8E-21 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PA257_5466 c03bd771bb5ec5acb9927ea9c31cea44 315 Pfam PF02581 Thiamine monophosphate synthase 132 309 4.4E-34 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PA257_5466 c03bd771bb5ec5acb9927ea9c31cea44 315 SUPERFAMILY SSF55811 2 126 6.36E-39 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_5466 c03bd771bb5ec5acb9927ea9c31cea44 315 SUPERFAMILY SSF51391 114 311 4.05E-44 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PA257_5466 c03bd771bb5ec5acb9927ea9c31cea44 315 Gene3D G3DSA:3.20.20.70 127 313 6.9E-41 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_5466 c03bd771bb5ec5acb9927ea9c31cea44 315 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 125 2.7E-32 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 PA257_5514 85f3f95a1198ae60fa39c475c0f55353 351 Pfam PF00155 Aminotransferase class I and II 26 347 5.7E-53 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_5514 85f3f95a1198ae60fa39c475c0f55353 351 SUPERFAMILY SSF53383 5 347 3.84E-75 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_5514 85f3f95a1198ae60fa39c475c0f55353 351 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 351 56.182 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PA257_5514 85f3f95a1198ae60fa39c475c0f55353 351 Gene3D G3DSA:3.40.640.10 38 259 9.4E-108 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_5514 85f3f95a1198ae60fa39c475c0f55353 351 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 PA257_5514 85f3f95a1198ae60fa39c475c0f55353 351 Gene3D G3DSA:3.90.1150.10 20 341 9.4E-108 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_5514 85f3f95a1198ae60fa39c475c0f55353 351 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 348 1.9E-92 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PA257_6705 40dcb692ec62f9e549e52831474a3178 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 395 4.8E-140 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 PA257_6705 40dcb692ec62f9e549e52831474a3178 402 Pfam PF02441 Flavoprotein 7 179 7.5E-42 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PA257_6705 40dcb692ec62f9e549e52831474a3178 402 SUPERFAMILY SSF52507 1 179 2.35E-59 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 PA257_6705 40dcb692ec62f9e549e52831474a3178 402 SUPERFAMILY SSF102645 184 400 5.49E-76 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PA257_6705 40dcb692ec62f9e549e52831474a3178 402 Gene3D G3DSA:3.40.50.10300 186 402 1.2E-78 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PA257_6705 40dcb692ec62f9e549e52831474a3178 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 1.3E-71 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PA257_6705 40dcb692ec62f9e549e52831474a3178 402 Gene3D G3DSA:3.40.50.1950 1 185 3.6E-53 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 PA257_4740 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 SUPERFAMILY SSF117143 80 423 3.66E-76 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like PA257_4740 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 383 461 1.0E-18 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PA257_4740 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 Gene3D G3DSA:2.60.98.20 150 286 3.3E-26 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily PA257_4740 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 444 2.7E-97 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PA257_4740 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 Pfam PF07559 Flagellar basal body protein FlaE 176 343 2.9E-27 T 12-10-2018 IPR011491 Flagellar hook protein FlgE PA257_4740 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 Pfam PF00460 Flagella basal body rod protein 3 33 2.7E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PA257_0900 732159e1ce306536422ff89824a03dc8 214 Gene3D G3DSA:3.40.50.2300 2 134 1.2E-45 T 12-10-2018 PA257_0900 732159e1ce306536422ff89824a03dc8 214 SMART SM00421 142 199 5.5E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0900 732159e1ce306536422ff89824a03dc8 214 SUPERFAMILY SSF52172 9 156 7.4E-34 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0900 732159e1ce306536422ff89824a03dc8 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 199 3.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0900 732159e1ce306536422ff89824a03dc8 214 Pfam PF00072 Response regulator receiver domain 9 118 9.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0900 732159e1ce306536422ff89824a03dc8 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 4.2E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0900 732159e1ce306536422ff89824a03dc8 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 4.2E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0900 732159e1ce306536422ff89824a03dc8 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 4.2E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0900 732159e1ce306536422ff89824a03dc8 214 SMART SM00448 7 118 1.9E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0900 732159e1ce306536422ff89824a03dc8 214 SUPERFAMILY SSF46894 132 206 2.82E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_0900 732159e1ce306536422ff89824a03dc8 214 Gene3D G3DSA:1.10.10.10 136 203 3.8E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0900 732159e1ce306536422ff89824a03dc8 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4853 dbb58f42d9452a48a1240a456ba8ff96 308 Gene3D G3DSA:1.10.10.10 7 95 1.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4853 dbb58f42d9452a48a1240a456ba8ff96 308 Gene3D G3DSA:3.40.190.10 101 287 1.3E-31 T 12-10-2018 PA257_4853 dbb58f42d9452a48a1240a456ba8ff96 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.5E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4853 dbb58f42d9452a48a1240a456ba8ff96 308 Pfam PF03466 LysR substrate binding domain 98 300 1.6E-36 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4853 dbb58f42d9452a48a1240a456ba8ff96 308 Gene3D G3DSA:3.40.190.10 173 276 1.3E-31 T 12-10-2018 PA257_4853 dbb58f42d9452a48a1240a456ba8ff96 308 SUPERFAMILY SSF53850 101 302 3.26E-37 T 12-10-2018 PA257_4853 dbb58f42d9452a48a1240a456ba8ff96 308 SUPERFAMILY SSF46785 7 117 4.03E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3874 ff1a3f848606187c87d0b60c5827b8e2 425 Gene3D G3DSA:1.20.1600.10 34 420 1.3E-57 T 12-10-2018 PA257_3874 ff1a3f848606187c87d0b60c5827b8e2 425 SUPERFAMILY SSF56954 15 413 1.83E-66 T 12-10-2018 PA257_3874 ff1a3f848606187c87d0b60c5827b8e2 425 Pfam PF02321 Outer membrane efflux protein 35 211 1.0E-22 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_3874 ff1a3f848606187c87d0b60c5827b8e2 425 Pfam PF02321 Outer membrane efflux protein 245 401 2.1E-17 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 5.7E-55 T 12-10-2018 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 5.7E-55 T 12-10-2018 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 5.7E-55 T 12-10-2018 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 5.7E-55 T 12-10-2018 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 5.7E-55 T 12-10-2018 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 249 275 5.7E-55 T 12-10-2018 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 5.7E-55 T 12-10-2018 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 4.5E-22 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 3.4E-9 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 360 382 3.4E-9 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 419 441 3.4E-9 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 60 84 3.4E-9 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 612 1.1E-229 T 12-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2907 491be6d8c063ee26aa2d80deeec73c01 615 Pfam PF00361 Proton-conducting membrane transporter 136 427 1.1E-90 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_4743 abad5f29bd4483fbd55dbf5a6a5600e4 135 Pfam PF00460 Flagella basal body rod protein 11 39 8.3E-9 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PA257_4743 abad5f29bd4483fbd55dbf5a6a5600e4 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 133 3.8E-46 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PA257_4743 abad5f29bd4483fbd55dbf5a6a5600e4 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site PA257_4743 abad5f29bd4483fbd55dbf5a6a5600e4 135 PIRSF PIRSF002889 1 135 1.9E-46 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SUPERFAMILY SSF52540 173 427 9.68E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 658 739 2.9E-25 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 538 556 1.1E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 614 1.1E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 496 514 1.1E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 567 585 1.1E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.4E-16 T 12-10-2018 IPR004176 Clp, N-terminal PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:3.40.50.300 444 656 1.1E-81 T 12-10-2018 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SUPERFAMILY SSF81923 1 142 5.1E-61 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 307 319 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SUPERFAMILY SSF52540 442 744 1.52E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 740 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:3.40.50.300 172 360 1.1E-64 T 12-10-2018 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 491 652 3.1E-49 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SMART SM00382 211 356 5.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SMART SM00382 492 659 1.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 216 328 5.8E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:1.10.8.60 658 757 4.4E-31 T 12-10-2018 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SMART SM01086 658 748 3.0E-33 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 523 541 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:1.10.1780.10 1 143 6.6E-44 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PA257_2935 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:1.10.8.60 361 443 2.6E-32 T 12-10-2018 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 Gene3D G3DSA:3.90.79.10 225 350 1.2E-12 T 12-10-2018 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 SMART SM00478 39 190 8.4E-50 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 277 5.8E-110 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 Pfam PF14815 NUDIX domain 238 343 8.3E-22 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.8E-8 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 168 1.1E-20 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 Gene3D G3DSA:1.10.1670.10 10 210 3.4E-86 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 Gene3D G3DSA:1.10.340.30 21 132 3.4E-86 T 12-10-2018 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 SUPERFAMILY SSF55811 220 345 5.19E-24 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_6443 d58986750fab8bcb6aa49550ff3e1b6e 355 SUPERFAMILY SSF48150 4 224 9.11E-75 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PA257_0457 8ce9195bac449c10ce8b77f07b47470e 265 Hamap MF_00443 Thiazole synthase [thiG]. 10 265 42.991 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 PA257_0457 8ce9195bac449c10ce8b77f07b47470e 265 Pfam PF05690 Thiazole biosynthesis protein ThiG 13 259 2.0E-113 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 PA257_0457 8ce9195bac449c10ce8b77f07b47470e 265 Gene3D G3DSA:3.20.20.70 1 265 2.9E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0457 8ce9195bac449c10ce8b77f07b47470e 265 SUPERFAMILY SSF110399 10 251 6.28E-92 T 12-10-2018 PA257_2224 f8a5a6f42704a5fc9beff5aefce9363a 431 Gene3D G3DSA:3.30.565.10 305 431 3.7E-11 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2224 f8a5a6f42704a5fc9beff5aefce9363a 431 Gene3D G3DSA:1.10.287.130 186 299 2.3E-17 T 12-10-2018 PA257_2224 f8a5a6f42704a5fc9beff5aefce9363a 431 SUPERFAMILY SSF55874 306 427 8.7E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2224 f8a5a6f42704a5fc9beff5aefce9363a 431 SMART SM00388 235 299 7.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2224 f8a5a6f42704a5fc9beff5aefce9363a 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 297 2.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2224 f8a5a6f42704a5fc9beff5aefce9363a 431 SUPERFAMILY SSF47384 218 295 1.77E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2224 f8a5a6f42704a5fc9beff5aefce9363a 431 SMART SM00387 339 430 0.0054 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_0587 4d9cd728755daac3b0f188308e08b76f 134 Gene3D G3DSA:3.10.129.10 1 126 1.4E-21 T 12-10-2018 PA257_0587 4d9cd728755daac3b0f188308e08b76f 134 SUPERFAMILY SSF54637 4 123 8.57E-24 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_0587 4d9cd728755daac3b0f188308e08b76f 134 Pfam PF03061 Thioesterase superfamily 17 90 3.7E-13 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_3041 6138929d3620e30ccbc0338e8873b9c6 477 SUPERFAMILY SSF111283 3 472 1.57E-94 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 PA257_3041 6138929d3620e30ccbc0338e8873b9c6 477 Pfam PF01523 Putative modulator of DNA gyrase 21 321 8.9E-43 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PA257_3041 6138929d3620e30ccbc0338e8873b9c6 477 Gene3D G3DSA:3.30.2290.10 6 206 2.5E-8 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal PA257_0351 6025e8ca850405fc863692be8e30535b 570 SMART SM00091 81 149 6.1E-6 T 12-10-2018 IPR000014 PAS domain PA257_0351 6025e8ca850405fc863692be8e30535b 570 SMART SM00091 206 272 3.4E-9 T 12-10-2018 IPR000014 PAS domain PA257_0351 6025e8ca850405fc863692be8e30535b 570 SUPERFAMILY SSF55785 211 318 1.3E-29 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0351 6025e8ca850405fc863692be8e30535b 570 Gene3D G3DSA:3.30.450.20 78 150 3.9E-19 T 12-10-2018 PA257_0351 6025e8ca850405fc863692be8e30535b 570 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 489 1.2E-40 T 12-10-2018 IPR000160 GGDEF domain PA257_0351 6025e8ca850405fc863692be8e30535b 570 SMART SM00086 278 320 3.8E-5 T 12-10-2018 IPR001610 PAC motif PA257_0351 6025e8ca850405fc863692be8e30535b 570 SMART SM00086 156 198 8.7E-10 T 12-10-2018 IPR001610 PAC motif PA257_0351 6025e8ca850405fc863692be8e30535b 570 Pfam PF00563 EAL domain 507 569 3.8E-20 T 12-10-2018 IPR001633 EAL domain PA257_0351 6025e8ca850405fc863692be8e30535b 570 Gene3D G3DSA:3.30.70.270 328 502 5.4E-59 T 12-10-2018 PA257_0351 6025e8ca850405fc863692be8e30535b 570 SUPERFAMILY SSF141868 506 569 8.37E-22 T 12-10-2018 IPR035919 EAL domain superfamily PA257_0351 6025e8ca850405fc863692be8e30535b 570 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 209 327 1.1E-21 T 12-10-2018 IPR000014 PAS domain PA257_0351 6025e8ca850405fc863692be8e30535b 570 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 79 197 8.0E-12 T 12-10-2018 IPR000014 PAS domain PA257_0351 6025e8ca850405fc863692be8e30535b 570 Gene3D G3DSA:3.20.20.450 503 570 2.0E-25 T 12-10-2018 IPR035919 EAL domain superfamily PA257_0351 6025e8ca850405fc863692be8e30535b 570 SMART SM00267 320 491 4.0E-61 T 12-10-2018 IPR000160 GGDEF domain PA257_0351 6025e8ca850405fc863692be8e30535b 570 Gene3D G3DSA:2.10.70.100 154 199 1.4E-12 T 12-10-2018 PA257_0351 6025e8ca850405fc863692be8e30535b 570 Gene3D G3DSA:3.30.450.20 200 327 3.0E-37 T 12-10-2018 PA257_0351 6025e8ca850405fc863692be8e30535b 570 SUPERFAMILY SSF55073 336 492 7.77E-49 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_0351 6025e8ca850405fc863692be8e30535b 570 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 486 3.0E-46 T 12-10-2018 IPR000160 GGDEF domain PA257_0351 6025e8ca850405fc863692be8e30535b 570 SUPERFAMILY SSF55785 87 199 2.09E-21 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0351 6025e8ca850405fc863692be8e30535b 570 Pfam PF00989 PAS fold 209 316 8.4E-16 T 12-10-2018 IPR013767 PAS fold GO:0006355 PA257_0351 6025e8ca850405fc863692be8e30535b 570 Pfam PF08447 PAS fold 104 192 9.0E-22 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 PA257_1777 c7d03df2e7fbfdfe17fca7191d874acf 188 SUPERFAMILY SSF54862 40 172 3.14E-28 T 12-10-2018 PA257_1777 c7d03df2e7fbfdfe17fca7191d874acf 188 Gene3D G3DSA:3.30.70.20 135 183 1.9E-7 T 12-10-2018 PA257_1777 c7d03df2e7fbfdfe17fca7191d874acf 188 Pfam PF14697 4Fe-4S dicluster domain 106 160 1.4E-17 T 12-10-2018 PA257_1777 c7d03df2e7fbfdfe17fca7191d874acf 188 Pfam PF04060 Putative Fe-S cluster 44 75 4.4E-14 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 PA257_1777 c7d03df2e7fbfdfe17fca7191d874acf 188 Gene3D G3DSA:3.30.70.20 98 131 6.9E-6 T 12-10-2018 PA257_1777 c7d03df2e7fbfdfe17fca7191d874acf 188 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 165 23.073 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 PA257_1777 c7d03df2e7fbfdfe17fca7191d874acf 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_1777 c7d03df2e7fbfdfe17fca7191d874acf 188 Gene3D G3DSA:3.20.20.20 36 97 2.2E-12 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_1777 c7d03df2e7fbfdfe17fca7191d874acf 188 PIRSF PIRSF005784 3 186 1.3E-84 T 12-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 PA257_1777 c7d03df2e7fbfdfe17fca7191d874acf 188 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 6.1E-87 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 PA257_5946 5daab83886895ecd19799ba58766423c 554 Pfam PF00342 Phosphoglucose isomerase 55 545 5.7E-194 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5946 5daab83886895ecd19799ba58766423c 554 SUPERFAMILY SSF53697 9 551 2.63E-208 T 12-10-2018 PA257_5946 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:1.10.1390.10 511 552 2.6E-16 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5946 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:3.40.50.10490 16 510 1.5E-219 T 12-10-2018 PA257_5946 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 153 172 2.6E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5946 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 501 514 2.6E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5946 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 469 487 2.6E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5946 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 487 501 2.6E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5946 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 342 363 2.6E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5946 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 265 283 2.6E-51 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5946 5daab83886895ecd19799ba58766423c 554 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 528 40.844 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5946 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:3.40.50.10490 101 295 1.5E-219 T 12-10-2018 PA257_5946 5daab83886895ecd19799ba58766423c 554 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 501 518 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_5946 5daab83886895ecd19799ba58766423c 554 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 269 282 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2252 c76c8c7bcd4fb2fee7af7f610b92ea47 476 SUPERFAMILY SSF56601 27 469 9.4E-92 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_2252 c76c8c7bcd4fb2fee7af7f610b92ea47 476 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 62 454 1.5E-65 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_2252 c76c8c7bcd4fb2fee7af7f610b92ea47 476 Gene3D G3DSA:3.50.80.20 92 162 3.6E-22 T 12-10-2018 PA257_2252 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 355 369 2.2E-22 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_2252 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 68 87 2.2E-22 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_2252 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 370 384 2.2E-22 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_2252 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 432 445 2.2E-22 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_2252 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 295 317 2.2E-22 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_2252 c76c8c7bcd4fb2fee7af7f610b92ea47 476 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 454 1.4E-86 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PA257_2252 c76c8c7bcd4fb2fee7af7f610b92ea47 476 Gene3D G3DSA:3.40.710.10 280 469 2.3E-56 T 12-10-2018 PA257_2763 6784fbf59f0a8e2ad192ab2a6603d709 259 Gene3D G3DSA:3.10.310.10 6 255 1.0E-97 T 12-10-2018 PA257_2763 6784fbf59f0a8e2ad192ab2a6603d709 259 Gene3D G3DSA:3.10.310.10 117 247 1.0E-97 T 12-10-2018 PA257_2763 6784fbf59f0a8e2ad192ab2a6603d709 259 SUPERFAMILY SSF54506 1 259 1.21E-86 T 12-10-2018 PA257_2763 6784fbf59f0a8e2ad192ab2a6603d709 259 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 257 8.7E-43 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_2763 6784fbf59f0a8e2ad192ab2a6603d709 259 Pfam PF02567 Phenazine biosynthesis-like protein 8 255 9.0E-63 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_2763 6784fbf59f0a8e2ad192ab2a6603d709 259 PIRSF PIRSF016184 1 259 9.3E-60 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_5089 4d6110065df20aa4fc7d4ed028b348fd 141 SUPERFAMILY SSF54593 6 131 4.83E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_5089 4d6110065df20aa4fc7d4ed028b348fd 141 Gene3D G3DSA:3.10.180.10 4 137 6.8E-38 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_5089 4d6110065df20aa4fc7d4ed028b348fd 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 129 5.4E-8 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_2522 057bfe07b6940138d73ce3e32c741a13 119 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 16 119 2.3E-44 T 12-10-2018 IPR021356 Integrating conjugative element protein PFL4702 PA257_2522 057bfe07b6940138d73ce3e32c741a13 119 Pfam PF11190 Protein of unknown function (DUF2976) 32 118 2.1E-32 T 12-10-2018 IPR021356 Integrating conjugative element protein PFL4702 PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 Gene3D G3DSA:2.170.190.11 56 146 3.9E-124 T 12-10-2018 PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 Gene3D G3DSA:3.40.980.10 180 330 3.9E-124 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 SMART SM00852 185 321 1.9E-40 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 SUPERFAMILY SSF53218 182 325 3.01E-40 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 Gene3D G3DSA:3.90.105.10 33 179 3.9E-124 T 12-10-2018 PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 Gene3D G3DSA:2.40.340.10 331 393 3.9E-124 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 181 317 6.2E-31 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 172 5.1E-43 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 SUPERFAMILY SSF63867 330 402 1.44E-15 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 Pfam PF00994 Probable molybdopterin binding domain 186 319 2.8E-27 T 12-10-2018 IPR001453 MoaB/Mog domain PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 Pfam PF03454 MoeA C-terminal region (domain IV) 335 400 4.6E-15 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_2273 9e3b5c703e534f3896b6ce85b676dd88 405 SUPERFAMILY SSF63882 8 181 3.66E-53 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_4502 220eb0e1eaf35874070a37a0f35fb6c7 97 Gene3D G3DSA:3.10.510.20 2 76 2.0E-30 T 12-10-2018 IPR038068 YcgL-like superfamily PA257_4502 220eb0e1eaf35874070a37a0f35fb6c7 97 Hamap MF_01866 Protein YcgL [ycgL]. 3 90 26.105 T 12-10-2018 IPR027354 YcgL domain PA257_4502 220eb0e1eaf35874070a37a0f35fb6c7 97 SUPERFAMILY SSF160191 2 94 3.01E-36 T 12-10-2018 IPR038068 YcgL-like superfamily PA257_4502 220eb0e1eaf35874070a37a0f35fb6c7 97 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 4 78 1.0E-37 T 12-10-2018 IPR027354 YcgL domain PA257_4502 220eb0e1eaf35874070a37a0f35fb6c7 97 Pfam PF05166 YcgL domain 5 77 6.5E-32 T 12-10-2018 IPR027354 YcgL domain PA257_6150 7d74139620283cf23733c68e8d7500ba 276 Hamap MF_01299 Oxaloacetate decarboxylase. 1 276 46.278 T 12-10-2018 IPR023687 Oxaloacetate decarboxylase, bacterial GO:0008948 KEGG: 00620+4.1.1.3 PA257_6150 7d74139620283cf23733c68e8d7500ba 276 Pfam PF13714 Phosphoenolpyruvate phosphomutase 2 236 1.1E-43 T 12-10-2018 PA257_6150 7d74139620283cf23733c68e8d7500ba 276 Gene3D G3DSA:3.20.20.60 1 276 5.5E-86 T 12-10-2018 PA257_6150 7d74139620283cf23733c68e8d7500ba 276 SUPERFAMILY SSF51621 1 272 1.17E-65 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 262 1.6E-13 T 12-10-2018 IPR000014 PAS domain PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 263 386 1.1E-8 T 12-10-2018 IPR000014 PAS domain PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 Gene3D G3DSA:1.10.10.10 379 493 3.5E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 SMART SM00091 142 209 0.063 T 12-10-2018 IPR000014 PAS domain PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 SMART SM00091 267 336 0.033 T 12-10-2018 IPR000014 PAS domain PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 SMART SM00091 13 84 0.18 T 12-10-2018 IPR000014 PAS domain PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 SUPERFAMILY SSF55785 136 251 2.97E-14 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 SMART SM00421 423 480 3.8E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 Pfam PF13188 PAS domain 14 66 6.8E-7 T 12-10-2018 IPR000014 PAS domain PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 SUPERFAMILY SSF46894 416 485 2.28E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 Gene3D G3DSA:3.30.450.20 6 142 3.4E-9 T 12-10-2018 PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 Gene3D G3DSA:3.30.450.20 267 378 1.4E-13 T 12-10-2018 PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 426 440 2.1E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 456 468 2.1E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 440 456 2.1E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 Pfam PF13426 PAS domain 160 252 2.2E-4 T 12-10-2018 IPR000014 PAS domain PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 Pfam PF13426 PAS domain 282 377 4.2E-8 T 12-10-2018 IPR000014 PAS domain PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 Pfam PF00196 Bacterial regulatory proteins, luxR family 426 480 8.8E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 SUPERFAMILY SSF55785 255 377 1.15E-14 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 SUPERFAMILY SSF55785 10 135 1.17E-6 T 12-10-2018 IPR035965 PAS domain superfamily PA257_0675 23d1da720d125dda910fcea5b319e8a3 496 Gene3D G3DSA:3.30.450.20 147 266 9.3E-17 T 12-10-2018 PA257_5659 1f35419f6f102eeceeaa1a387d27663b 159 Pfam PF12101 Protein of unknown function (DUF3577) 7 136 2.3E-55 T 12-10-2018 IPR021960 Protein of unknown function DUF3577 PA257_1578 425df359fc07d8a917a4a929677b5cfb 378 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 376 44.007 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 PA257_1578 425df359fc07d8a917a4a929677b5cfb 378 SUPERFAMILY SSF53756 6 375 8.48E-39 T 12-10-2018 PA257_1578 425df359fc07d8a917a4a929677b5cfb 378 Pfam PF02684 Lipid-A-disaccharide synthetase 7 360 7.8E-121 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 PA257_1578 425df359fc07d8a917a4a929677b5cfb 378 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 374 5.2E-127 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 PA257_1578 425df359fc07d8a917a4a929677b5cfb 378 Gene3D G3DSA:3.40.50.2000 170 371 2.6E-6 T 12-10-2018 PA257_4975 0c0e804f0ec756b73890d0384ea6c8ba 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 74 96 1.9E-9 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PA257_4975 0c0e804f0ec756b73890d0384ea6c8ba 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 138 157 1.9E-9 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PA257_4975 0c0e804f0ec756b73890d0384ea6c8ba 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 178 196 1.9E-9 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PA257_4975 0c0e804f0ec756b73890d0384ea6c8ba 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 209 228 1.9E-9 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PA257_4975 0c0e804f0ec756b73890d0384ea6c8ba 262 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 15 229 5.2E-47 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PA257_4975 0c0e804f0ec756b73890d0384ea6c8ba 262 SUPERFAMILY SSF56534 3 248 4.58E-101 T 12-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily PA257_4975 0c0e804f0ec756b73890d0384ea6c8ba 262 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 117 128 - T 12-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 PA257_4975 0c0e804f0ec756b73890d0384ea6c8ba 262 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 9 254 1.4E-134 T 12-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 PA257_4975 0c0e804f0ec756b73890d0384ea6c8ba 262 Gene3D G3DSA:1.10.800.10 1 262 1.2E-103 T 12-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 PA257_1159 73f6833097f516a6d47a57da6e037d75 296 SUPERFAMILY SSF53474 5 294 1.75E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1159 73f6833097f516a6d47a57da6e037d75 296 Gene3D G3DSA:3.40.50.1820 1 292 2.5E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1159 73f6833097f516a6d47a57da6e037d75 296 PRINTS PR00412 Epoxide hydrolase signature 236 252 1.7E-16 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_1159 73f6833097f516a6d47a57da6e037d75 296 PRINTS PR00412 Epoxide hydrolase signature 31 49 1.7E-16 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_1159 73f6833097f516a6d47a57da6e037d75 296 PRINTS PR00412 Epoxide hydrolase signature 51 66 1.7E-16 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_1159 73f6833097f516a6d47a57da6e037d75 296 PRINTS PR00412 Epoxide hydrolase signature 99 112 1.7E-16 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_1159 73f6833097f516a6d47a57da6e037d75 296 PRINTS PR00412 Epoxide hydrolase signature 270 292 1.7E-16 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_1159 73f6833097f516a6d47a57da6e037d75 296 Pfam PF00561 alpha/beta hydrolase fold 28 278 1.5E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_4271 df59f0c26705664e7d06f9162fe0b1e4 449 PIRSF PIRSF005353 14 449 1.2E-173 T 12-10-2018 IPR026033 Purine permease PbuG-like PA257_4271 df59f0c26705664e7d06f9162fe0b1e4 449 Pfam PF00860 Permease family 38 411 8.9E-51 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PA257_1825 fc8884c9c2517fa6ac7db9bbe4d0a233 197 Gene3D G3DSA:3.40.50.360 2 187 9.4E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_1825 fc8884c9c2517fa6ac7db9bbe4d0a233 197 SUPERFAMILY SSF52218 1 168 3.26E-29 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_1825 fc8884c9c2517fa6ac7db9bbe4d0a233 197 Pfam PF03358 NADPH-dependent FMN reductase 1 143 3.7E-31 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PA257_1825 fc8884c9c2517fa6ac7db9bbe4d0a233 197 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 3 171 2.4E-69 T 12-10-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 PA257_1016 8fe8ef3bae4cf14b0fb6c354831e979e 104 SUPERFAMILY SSF46785 11 80 9.88E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1016 8fe8ef3bae4cf14b0fb6c354831e979e 104 Gene3D G3DSA:1.10.10.10 2 80 9.2E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4691 065cbedd4deaf1f0cdcc575c970d3c99 436 SMART SM00267 239 412 3.6E-56 T 12-10-2018 IPR000160 GGDEF domain PA257_4691 065cbedd4deaf1f0cdcc575c970d3c99 436 Pfam PF00990 Diguanylate cyclase, GGDEF domain 250 406 1.1E-46 T 12-10-2018 IPR000160 GGDEF domain PA257_4691 065cbedd4deaf1f0cdcc575c970d3c99 436 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 409 1.8E-44 T 12-10-2018 IPR000160 GGDEF domain PA257_4691 065cbedd4deaf1f0cdcc575c970d3c99 436 SUPERFAMILY SSF55073 255 409 1.1E-44 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_4691 065cbedd4deaf1f0cdcc575c970d3c99 436 SMART SM00304 184 237 9.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4691 065cbedd4deaf1f0cdcc575c970d3c99 436 Gene3D G3DSA:3.30.70.270 255 414 1.5E-54 T 12-10-2018 PA257_4691 065cbedd4deaf1f0cdcc575c970d3c99 436 Pfam PF17152 Periplasmic sensor domain 46 146 3.6E-34 T 12-10-2018 IPR033417 Periplasmic sensor domain CHASE8 PA257_5524 d3532d0b384f66ccea2e6536da21d9bb 269 Pfam PF00005 ABC transporter 25 172 1.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_5524 d3532d0b384f66ccea2e6536da21d9bb 269 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_5524 d3532d0b384f66ccea2e6536da21d9bb 269 SUPERFAMILY SSF52540 8 234 1.74E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5524 d3532d0b384f66ccea2e6536da21d9bb 269 SMART SM00382 33 222 2.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5524 d3532d0b384f66ccea2e6536da21d9bb 269 Gene3D G3DSA:3.40.50.300 7 254 5.2E-64 T 12-10-2018 PA257_2930 59b989225fb870adccdb931950f6b5a7 156 Pfam PF00293 NUDIX domain 4 119 1.3E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_2930 59b989225fb870adccdb931950f6b5a7 156 SUPERFAMILY SSF55811 4 143 4.74E-28 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_2930 59b989225fb870adccdb931950f6b5a7 156 Gene3D G3DSA:3.90.79.10 1 150 1.2E-40 T 12-10-2018 PA257_2930 59b989225fb870adccdb931950f6b5a7 156 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PA257_3004 be8852863ee12d762671c1e3fec46547 170 Pfam PF11776 Nickel/cobalt transporter regulator 135 162 2.7E-6 T 12-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB PA257_3004 be8852863ee12d762671c1e3fec46547 170 Gene3D G3DSA:3.10.450.160 83 170 3.6E-29 T 12-10-2018 PA257_4431 8b6c4b3611a9087bbad59eb18db763e1 297 SUPERFAMILY SSF103481 185 282 1.19E-7 T 12-10-2018 PA257_4431 8b6c4b3611a9087bbad59eb18db763e1 297 Pfam PF00892 EamA-like transporter family 150 280 1.5E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_4431 8b6c4b3611a9087bbad59eb18db763e1 297 SUPERFAMILY SSF103481 47 137 1.31E-6 T 12-10-2018 PA257_3996 e02dc13e84de242a2615bdffd8250f85 276 Gene3D G3DSA:2.30.30.60 228 275 3.4E-6 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PA257_3996 e02dc13e84de242a2615bdffd8250f85 276 Pfam PF00924 Mechanosensitive ion channel 186 273 7.4E-9 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PA257_3996 e02dc13e84de242a2615bdffd8250f85 276 SUPERFAMILY SSF50182 221 274 5.89E-7 T 12-10-2018 IPR010920 LSM domain superfamily PA257_3996 e02dc13e84de242a2615bdffd8250f85 276 Pfam PF05552 Conserved TM helix 111 156 1.2E-8 T 12-10-2018 IPR008910 Conserved TM helix PA257_3996 e02dc13e84de242a2615bdffd8250f85 276 Pfam PF05552 Conserved TM helix 16 62 7.5E-13 T 12-10-2018 IPR008910 Conserved TM helix PA257_1996 3da750b2fd5b7825be15616bc17662d6 373 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 227 1.5E-17 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_1996 3da750b2fd5b7825be15616bc17662d6 373 SUPERFAMILY SSF53901 4 372 1.71E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1996 3da750b2fd5b7825be15616bc17662d6 373 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 371 7.1E-22 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_1996 3da750b2fd5b7825be15616bc17662d6 373 Gene3D G3DSA:3.40.47.10 218 373 1.9E-41 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1996 3da750b2fd5b7825be15616bc17662d6 373 Gene3D G3DSA:3.40.47.10 1 214 1.1E-58 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_5265 80a1eaa842574667c2c0380ef108ee69 706 SUPERFAMILY SSF53335 90 510 1.57E-57 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5265 80a1eaa842574667c2c0380ef108ee69 706 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 185 204 3.2E-12 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PA257_5265 80a1eaa842574667c2c0380ef108ee69 706 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 475 489 3.2E-12 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PA257_5265 80a1eaa842574667c2c0380ef108ee69 706 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 123 135 3.2E-12 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PA257_5265 80a1eaa842574667c2c0380ef108ee69 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 126 132 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_5265 80a1eaa842574667c2c0380ef108ee69 706 Pfam PF01555 DNA methylase 123 503 1.2E-33 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 PA257_5265 80a1eaa842574667c2c0380ef108ee69 706 PIRSF PIRSF015855 5 706 2.4E-168 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PA257_6528 aa20410f4702c142e178d6127778eefa 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 186 7.9E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_6528 aa20410f4702c142e178d6127778eefa 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 187 1.4E-13 T 12-10-2018 PA257_6528 aa20410f4702c142e178d6127778eefa 221 SUPERFAMILY SSF56784 5 203 2.53E-43 T 12-10-2018 IPR036412 HAD-like superfamily PA257_6528 aa20410f4702c142e178d6127778eefa 221 Gene3D G3DSA:3.40.50.1000 8 205 2.3E-28 T 12-10-2018 IPR023214 HAD superfamily PA257_6528 aa20410f4702c142e178d6127778eefa 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 9.7E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_6528 aa20410f4702c142e178d6127778eefa 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 9.7E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_6528 aa20410f4702c142e178d6127778eefa 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 9.7E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_6528 aa20410f4702c142e178d6127778eefa 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 9.7E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_6528 aa20410f4702c142e178d6127778eefa 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 180 193 9.7E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_2150 a07a36a757029677db21a490c1c75718 620 SUPERFAMILY SSF53335 114 300 6.48E-17 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2150 a07a36a757029677db21a490c1c75718 620 Pfam PF02719 Polysaccharide biosynthesis protein 256 563 5.9E-129 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PA257_2150 a07a36a757029677db21a490c1c75718 620 Gene3D G3DSA:3.40.50.720 252 601 1.3E-113 T 12-10-2018 PA257_2150 a07a36a757029677db21a490c1c75718 620 SUPERFAMILY SSF51735 255 566 7.04E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2150 a07a36a757029677db21a490c1c75718 620 Gene3D G3DSA:3.40.50.720 117 237 6.4E-30 T 12-10-2018 PA257_5733 d5d04df6c8387db7f9cd224dcbc8dd24 314 Gene3D G3DSA:3.40.50.11270 12 96 2.8E-112 T 12-10-2018 PA257_5733 d5d04df6c8387db7f9cd224dcbc8dd24 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.006 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 PA257_5733 d5d04df6c8387db7f9cd224dcbc8dd24 314 Pfam PF02401 LytB protein 3 283 1.5E-92 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 PA257_5733 d5d04df6c8387db7f9cd224dcbc8dd24 314 Gene3D G3DSA:3.40.1010.20 97 197 2.8E-112 T 12-10-2018 PA257_5733 d5d04df6c8387db7f9cd224dcbc8dd24 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 5.2E-100 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 PA257_5733 d5d04df6c8387db7f9cd224dcbc8dd24 314 Gene3D G3DSA:3.40.1010.20 6 282 2.8E-112 T 12-10-2018 PA257_2333 73a03d7a3f71c93721cfe7d3e4399d9a 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 7.9E-56 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 PA257_2333 73a03d7a3f71c93721cfe7d3e4399d9a 192 SUPERFAMILY SSF52972 2 185 3.92E-58 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PA257_2333 73a03d7a3f71c93721cfe7d3e4399d9a 192 PIRSF PIRSF006305 1 191 3.2E-45 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 PA257_2333 73a03d7a3f71c93721cfe7d3e4399d9a 192 Gene3D G3DSA:3.90.950.10 2 191 5.0E-62 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PA257_2333 73a03d7a3f71c93721cfe7d3e4399d9a 192 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 31.142 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 PA257_2333 73a03d7a3f71c93721cfe7d3e4399d9a 192 Pfam PF02545 Maf-like protein 4 185 1.3E-44 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 PA257_0003 12a71182b688681f7ed2e06e5a45048b 369 SUPERFAMILY SSF52540 1 342 6.81E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0003 12a71182b688681f7ed2e06e5a45048b 369 Gene3D G3DSA:3.40.50.300 7 334 4.3E-84 T 12-10-2018 PA257_0003 12a71182b688681f7ed2e06e5a45048b 369 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 359 2.4E-115 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PA257_0003 12a71182b688681f7ed2e06e5a45048b 369 Gene3D G3DSA:1.20.1050.90 121 299 4.3E-84 T 12-10-2018 PA257_0003 12a71182b688681f7ed2e06e5a45048b 369 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 357 7.7E-33 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal PA257_0003 12a71182b688681f7ed2e06e5a45048b 369 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 369 95.384 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PA257_0003 12a71182b688681f7ed2e06e5a45048b 369 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PA257_0003 12a71182b688681f7ed2e06e5a45048b 369 ProSitePatterns PS00618 RecF protein signature 2. 300 318 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PA257_4165 037b5ed737b399b43dd189658f1e98c4 555 Gene3D G3DSA:3.40.50.12780 4 421 3.3E-91 T 12-10-2018 PA257_4165 037b5ed737b399b43dd189658f1e98c4 555 Pfam PF00501 AMP-binding enzyme 12 428 3.5E-91 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_4165 037b5ed737b399b43dd189658f1e98c4 555 SUPERFAMILY SSF56801 8 540 2.22E-113 T 12-10-2018 PA257_4165 037b5ed737b399b43dd189658f1e98c4 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3036 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 93 115 1.8E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3036 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 214 233 1.8E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3036 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 186 204 1.8E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3036 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 353 375 1.8E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3036 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 412 432 1.8E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3036 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 309 327 1.8E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3036 0ad5b71963577fb567266c0cc4ad6f7b 449 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 7.6E-149 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_3036 0ad5b71963577fb567266c0cc4ad6f7b 449 Pfam PF01235 Sodium:alanine symporter family 56 447 1.9E-141 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_1498 0f52a58d0da42c861dfa2572b7daace0 368 SUPERFAMILY SSF51395 1 356 6.41E-118 T 12-10-2018 PA257_1498 0f52a58d0da42c861dfa2572b7daace0 368 Gene3D G3DSA:3.20.20.70 1 355 9.2E-124 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1498 0f52a58d0da42c861dfa2572b7daace0 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 340 1.5E-70 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PA257_0191 120eceadefab5d8ea320581a9441f195 538 Gene3D G3DSA:3.60.20.40 360 538 1.9E-63 T 12-10-2018 PA257_0191 120eceadefab5d8ea320581a9441f195 538 Gene3D G3DSA:1.10.246.130 253 359 3.2E-24 T 12-10-2018 PA257_0191 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 357 375 1.7E-41 T 12-10-2018 PA257_0191 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 114 132 1.7E-41 T 12-10-2018 PA257_0191 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 237 253 1.7E-41 T 12-10-2018 PA257_0191 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 285 1.7E-41 T 12-10-2018 PA257_0191 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 412 427 1.7E-41 T 12-10-2018 PA257_0191 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 45 70 1.7E-41 T 12-10-2018 PA257_0191 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 132 151 1.7E-41 T 12-10-2018 PA257_0191 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 381 399 1.7E-41 T 12-10-2018 PA257_0191 120eceadefab5d8ea320581a9441f195 538 SUPERFAMILY SSF56235 7 535 1.74E-174 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_0191 120eceadefab5d8ea320581a9441f195 538 Pfam PF01019 Gamma-glutamyltranspeptidase 38 532 5.4E-159 T 12-10-2018 PA257_5471 7de30bdf4172bac836b8879f38732bee 307 Gene3D G3DSA:2.70.70.10 147 304 1.1E-46 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_5471 7de30bdf4172bac836b8879f38732bee 307 Pfam PF01551 Peptidase family M23 202 296 6.1E-32 T 12-10-2018 IPR016047 Peptidase M23 PA257_5471 7de30bdf4172bac836b8879f38732bee 307 SUPERFAMILY SSF51261 94 300 3.3E-56 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_4838 33e0ddc53e0a3e544d6e003c8b971d66 134 Gene3D G3DSA:3.10.129.10 1 134 1.1E-25 T 12-10-2018 PA257_4838 33e0ddc53e0a3e544d6e003c8b971d66 134 SUPERFAMILY SSF54637 2 133 6.08E-30 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_4838 33e0ddc53e0a3e544d6e003c8b971d66 134 Pfam PF03061 Thioesterase superfamily 20 105 2.0E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 Gene3D G3DSA:1.10.287.470 80 117 1.3E-10 T 12-10-2018 PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 SUPERFAMILY SSF111369 118 178 2.88E-5 T 12-10-2018 PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 57 77 2.0E-9 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 344 2.0E-9 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 Gene3D G3DSA:1.10.287.470 118 179 1.2E-7 T 12-10-2018 PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 SUPERFAMILY SSF111369 45 109 4.71E-7 T 12-10-2018 PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 SUPERFAMILY SSF111369 187 284 1.7E-11 T 12-10-2018 PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 286 2.5E-18 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 Gene3D G3DSA:2.40.30.170 226 343 7.7E-36 T 12-10-2018 PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 Pfam PF00529 HlyD membrane-fusion protein of T1SS 20 339 1.2E-8 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_2156 1dd72d1b2e10e2bc9cbf8304308e3873 344 Gene3D G3DSA:2.40.50.100 47 79 1.3E-10 T 12-10-2018 PA257_1339 b06ea793df36cbe79f9fc0486cae2874 355 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 353 1.3E-66 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 PA257_1339 b06ea793df36cbe79f9fc0486cae2874 355 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 353 2.5E-130 T 12-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 PA257_0384 18f3e354539b232c0865a01f8293761d 409 Gene3D G3DSA:3.30.70.260 328 408 4.1E-32 T 12-10-2018 PA257_0384 18f3e354539b232c0865a01f8293761d 409 SUPERFAMILY SSF52283 7 136 3.4E-51 T 12-10-2018 PA257_0384 18f3e354539b232c0865a01f8293761d 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PA257_0384 18f3e354539b232c0865a01f8293761d 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 1.9E-47 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PA257_0384 18f3e354539b232c0865a01f8293761d 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.5E-37 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PA257_0384 18f3e354539b232c0865a01f8293761d 409 Gene3D G3DSA:3.40.50.720 109 297 3.5E-104 T 12-10-2018 PA257_0384 18f3e354539b232c0865a01f8293761d 409 SUPERFAMILY SSF55021 334 408 2.75E-16 T 12-10-2018 PA257_0384 18f3e354539b232c0865a01f8293761d 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PA257_0384 18f3e354539b232c0865a01f8293761d 409 SUPERFAMILY SSF51735 108 295 3.26E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0384 18f3e354539b232c0865a01f8293761d 409 Gene3D G3DSA:3.40.50.720 14 312 3.5E-104 T 12-10-2018 PA257_0384 18f3e354539b232c0865a01f8293761d 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PA257_2564 e8952a536ce21d37e89598735cb523aa 336 Gene3D G3DSA:3.40.50.720 128 272 3.5E-113 T 12-10-2018 PA257_2564 e8952a536ce21d37e89598735cb523aa 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 1.6E-7 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_2564 e8952a536ce21d37e89598735cb523aa 336 SUPERFAMILY SSF50129 1 142 9.28E-34 T 12-10-2018 IPR011032 GroES-like superfamily PA257_2564 e8952a536ce21d37e89598735cb523aa 336 SUPERFAMILY SSF51735 117 277 2.62E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2564 e8952a536ce21d37e89598735cb523aa 336 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 336 3.3E-162 T 12-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 PA257_2564 e8952a536ce21d37e89598735cb523aa 336 Pfam PF13602 Zinc-binding dehydrogenase 193 333 6.2E-15 T 12-10-2018 PA257_2564 e8952a536ce21d37e89598735cb523aa 336 SMART SM00829 10 333 1.9E-11 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_2564 e8952a536ce21d37e89598735cb523aa 336 Gene3D G3DSA:3.90.180.10 22 333 3.5E-113 T 12-10-2018 PA257_4848 39b7a5ceff952aaf419d5c0f3765430f 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4848 39b7a5ceff952aaf419d5c0f3765430f 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4848 39b7a5ceff952aaf419d5c0f3765430f 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4848 39b7a5ceff952aaf419d5c0f3765430f 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4848 39b7a5ceff952aaf419d5c0f3765430f 257 SUPERFAMILY SSF51735 4 256 1.16E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4848 39b7a5ceff952aaf419d5c0f3765430f 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 5.8E-41 T 12-10-2018 PA257_4848 39b7a5ceff952aaf419d5c0f3765430f 257 Gene3D G3DSA:3.40.50.720 1 257 1.2E-65 T 12-10-2018 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 45 52 4.1E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 143 154 4.1E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 200 208 4.1E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 106 125 4.1E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 SUPERFAMILY SSF52343 83 226 4.98E-22 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_2561 987b76361a82367d4fd64a3be0a97985 234 PRINTS PR00406 Cytochrome B5 reductase signature 106 125 1.5E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 PRINTS PR00406 Cytochrome B5 reductase signature 143 154 1.5E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 PRINTS PR00406 Cytochrome B5 reductase signature 45 52 1.5E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 PRINTS PR00406 Cytochrome B5 reductase signature 82 96 1.5E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 Gene3D G3DSA:2.40.30.10 1 93 2.0E-19 T 12-10-2018 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 Gene3D G3DSA:3.40.50.80 102 234 7.4E-20 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_2561 987b76361a82367d4fd64a3be0a97985 234 Pfam PF00175 Oxidoreductase NAD-binding domain 107 213 2.1E-9 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_2561 987b76361a82367d4fd64a3be0a97985 234 SUPERFAMILY SSF63380 2 98 2.04E-21 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_2561 987b76361a82367d4fd64a3be0a97985 234 Pfam PF00970 Oxidoreductase FAD-binding domain 8 92 1.5E-11 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 Pfam PF00672 HAMP domain 302 351 1.1E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 414 597 1.5E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 SMART SM00304 301 355 7.7E-16 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 SMART SM00304 390 450 18.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 SUPERFAMILY SSF103190 93 184 1.78E-8 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 Pfam PF02743 Cache domain 37 263 1.9E-34 T 12-10-2018 IPR033479 Double Cache domain 1 PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 Gene3D G3DSA:1.10.287.950 301 632 2.2E-76 T 12-10-2018 PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 SMART SM00283 370 631 8.8E-98 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 Gene3D G3DSA:3.30.450.20 54 275 6.7E-61 T 12-10-2018 PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 SUPERFAMILY SSF58104 323 632 2.35E-76 T 12-10-2018 PA257_5368 8773baa9c4d0bfa80945a0c3250db10a 632 Gene3D G3DSA:3.30.450.20 66 177 6.7E-61 T 12-10-2018 PA257_1574 41bbcad943e3e978be26ebe8ecd04371 173 SUPERFAMILY SSF111384 27 170 1.06E-28 T 12-10-2018 PA257_1574 41bbcad943e3e978be26ebe8ecd04371 173 Gene3D G3DSA:3.30.910.20 20 173 2.0E-23 T 12-10-2018 IPR024930 Skp domain superfamily PA257_1574 41bbcad943e3e978be26ebe8ecd04371 173 Pfam PF03938 Outer membrane protein (OmpH-like) 14 169 8.6E-25 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 PA257_1574 41bbcad943e3e978be26ebe8ecd04371 173 SMART SM00935 16 170 1.2E-37 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 PA257_0596 c05998734a8d4c819971c5fae68fab74 477 Pfam PF07690 Major Facilitator Superfamily 20 410 2.3E-48 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0596 c05998734a8d4c819971c5fae68fab74 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 417 4.4E-78 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 PA257_0596 c05998734a8d4c819971c5fae68fab74 477 Gene3D G3DSA:1.20.1720.10 16 223 5.0E-49 T 12-10-2018 PA257_0596 c05998734a8d4c819971c5fae68fab74 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.5E-5 T 12-10-2018 PA257_0596 c05998734a8d4c819971c5fae68fab74 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 1.5E-5 T 12-10-2018 PA257_0596 c05998734a8d4c819971c5fae68fab74 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.5E-5 T 12-10-2018 PA257_0596 c05998734a8d4c819971c5fae68fab74 477 SUPERFAMILY SSF103473 4 467 2.22E-62 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0596 c05998734a8d4c819971c5fae68fab74 477 Gene3D G3DSA:1.20.1250.20 264 460 4.1E-15 T 12-10-2018 PA257_0768 2d1598e790ee3c45e6ba11d3432276a2 108 SUPERFAMILY SSF160719 10 106 4.58E-25 T 12-10-2018 PA257_0768 2d1598e790ee3c45e6ba11d3432276a2 108 Pfam PF04965 Gene 25-like lysozyme 15 81 4.9E-16 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD PA257_0768 2d1598e790ee3c45e6ba11d3432276a2 108 Gene3D G3DSA:3.10.450.40 3 106 1.1E-19 T 12-10-2018 PA257_6178 433e3ad8e9ac2699752b2efc14584b6e 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_6178 433e3ad8e9ac2699752b2efc14584b6e 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 93 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_6178 433e3ad8e9ac2699752b2efc14584b6e 446 Gene3D G3DSA:1.20.1250.20 16 427 1.0E-68 T 12-10-2018 PA257_6178 433e3ad8e9ac2699752b2efc14584b6e 446 Pfam PF07690 Major Facilitator Superfamily 28 290 3.8E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6178 433e3ad8e9ac2699752b2efc14584b6e 446 SUPERFAMILY SSF103473 9 430 2.49E-75 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_2175 922f5b848e2337631c98e688e7f83e30 474 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 139 154 7.5E-48 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 292 306 7.5E-48 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 114 122 7.5E-48 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 125 138 7.5E-48 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 201 214 7.5E-48 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 349 360 7.5E-48 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 406 419 7.5E-48 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 215 228 7.5E-48 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 88 101 7.5E-48 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 3.5E-233 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 1.6E-159 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.578 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 SUPERFAMILY SSF53732 2 472 2.49E-163 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 Gene3D G3DSA:3.30.499.10 332 474 1.1E-49 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 PA257_2175 922f5b848e2337631c98e688e7f83e30 474 Gene3D G3DSA:3.30.499.20 5 292 4.9E-97 T 12-10-2018 PA257_4246 40c12cd486a15ac1a64961910edc90a4 278 Pfam PF10118 Predicted metal-dependent hydrolase 16 262 3.0E-91 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 PA257_4246 40c12cd486a15ac1a64961910edc90a4 278 PIRSF PIRSF007580 1 278 8.5E-103 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 Gene3D G3DSA:2.40.110.10 120 235 5.5E-33 T 12-10-2018 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 218 2.5E-21 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 Gene3D G3DSA:1.20.140.10 236 380 3.6E-36 T 12-10-2018 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 SUPERFAMILY SSF56645 5 243 3.53E-60 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 Gene3D G3DSA:1.10.540.10 3 116 3.3E-28 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 SUPERFAMILY SSF47203 229 384 1.43E-43 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 115 1.2E-24 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 364 8.3E-34 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 PIRSF PIRSF016578 4 194 6.2E-7 T 12-10-2018 PA257_4966 a0901ce2d3b090de5a0ad9fb4ee11fea 386 PIRSF PIRSF016578 236 383 1.5E-6 T 12-10-2018 PA257_3930 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3930 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3930 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3930 da63f311b437b57863b3e84822cee4ab 255 Gene3D G3DSA:3.40.50.720 1 254 4.2E-79 T 12-10-2018 PA257_3930 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 9.4E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3930 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 9.4E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3930 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 9.4E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3930 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 9.4E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3930 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 9.4E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3930 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 9.4E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_3930 da63f311b437b57863b3e84822cee4ab 255 SUPERFAMILY SSF51735 10 253 6.22E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3930 da63f311b437b57863b3e84822cee4ab 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_3930 da63f311b437b57863b3e84822cee4ab 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 1.4E-65 T 12-10-2018 PA257_2601 13393de1c6a4f1aed6d36ec183575c8e 322 Gene3D G3DSA:3.30.460.20 2 131 5.6E-20 T 12-10-2018 PA257_2601 13393de1c6a4f1aed6d36ec183575c8e 322 SUPERFAMILY SSF144083 258 319 2.48E-17 T 12-10-2018 PA257_2601 13393de1c6a4f1aed6d36ec183575c8e 322 SUPERFAMILY SSF143865 3 248 1.44E-55 T 12-10-2018 PA257_2601 13393de1c6a4f1aed6d36ec183575c8e 322 Pfam PF01544 CorA-like Mg2+ transporter protein 32 318 2.3E-53 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PA257_2601 13393de1c6a4f1aed6d36ec183575c8e 322 Gene3D G3DSA:1.20.58.340 132 243 5.8E-27 T 12-10-2018 PA257_2601 13393de1c6a4f1aed6d36ec183575c8e 322 Gene3D G3DSA:1.20.58.340 265 322 2.0E-20 T 12-10-2018 PA257_5065 e1810d9207452ad050c335f71ede74a8 263 Gene3D G3DSA:2.10.109.10 130 260 6.9E-8 T 12-10-2018 PA257_5065 e1810d9207452ad050c335f71ede74a8 263 Pfam PF00717 Peptidase S24-like 170 236 1.3E-10 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_5065 e1810d9207452ad050c335f71ede74a8 263 SUPERFAMILY SSF51306 121 255 4.97E-22 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_1310 eb781d86bd87af03d406fab5a3b3a697 233 Gene3D G3DSA:1.20.1050.10 89 227 1.5E-10 T 12-10-2018 PA257_1310 eb781d86bd87af03d406fab5a3b3a697 233 SUPERFAMILY SSF47616 158 229 6.55E-10 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_1310 eb781d86bd87af03d406fab5a3b3a697 233 SUPERFAMILY SSF52833 1 102 4.9E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_1310 eb781d86bd87af03d406fab5a3b3a697 233 Pfam PF17171 Glutathione S-transferase, C-terminal domain 164 226 1.9E-16 T 12-10-2018 IPR033468 Metaxin, glutathione S-transferase domain PA257_1310 eb781d86bd87af03d406fab5a3b3a697 233 Pfam PF17172 Glutathione S-transferase N-terminal domain 18 114 1.9E-26 T 12-10-2018 IPR012336 Thioredoxin-like fold PA257_6200 77fb00bdc04ad36bd82a6eb29a33486f 307 SUPERFAMILY SSF52266 31 304 1.41E-10 T 12-10-2018 PA257_6200 77fb00bdc04ad36bd82a6eb29a33486f 307 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 32 300 3.0E-5 T 12-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 PA257_6200 77fb00bdc04ad36bd82a6eb29a33486f 307 Gene3D G3DSA:3.40.50.1110 21 306 5.6E-48 T 12-10-2018 IPR036514 SGNH hydrolase superfamily PA257_4823 0288135a3e93da525cc296a15f943ca3 332 SUPERFAMILY SSF53850 140 296 1.16E-18 T 12-10-2018 PA257_4823 0288135a3e93da525cc296a15f943ca3 332 Gene3D G3DSA:1.10.10.10 3 83 2.3E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4823 0288135a3e93da525cc296a15f943ca3 332 Pfam PF03466 LysR substrate binding domain 139 292 6.2E-14 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4823 0288135a3e93da525cc296a15f943ca3 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.0E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4823 0288135a3e93da525cc296a15f943ca3 332 SUPERFAMILY SSF46785 3 78 7.07E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4823 0288135a3e93da525cc296a15f943ca3 332 Gene3D G3DSA:3.40.190.290 94 309 1.4E-104 T 12-10-2018 PA257_2590 4ef365e07a274c933d0d61ed3dc0e8cb 154 Gene3D G3DSA:3.50.70.20 1 154 3.4E-46 T 12-10-2018 IPR038142 Cytochrome P460 superfamily PA257_2590 4ef365e07a274c933d0d61ed3dc0e8cb 154 Pfam PF16694 Cytochrome P460 28 144 7.3E-26 T 12-10-2018 IPR032033 Cytochrome P460 PA257_0443 9eee3c65a8903cc45b5486f0d11731af 136 Gene3D G3DSA:3.40.630.30 10 128 2.2E-17 T 12-10-2018 PA257_0443 9eee3c65a8903cc45b5486f0d11731af 136 Pfam PF00583 Acetyltransferase (GNAT) family 40 119 7.1E-8 T 12-10-2018 IPR000182 GNAT domain PA257_0443 9eee3c65a8903cc45b5486f0d11731af 136 SUPERFAMILY SSF55729 12 119 1.06E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6403 c3f496ebad4d4e390ab001d502cbf0f1 643 Gene3D G3DSA:2.40.128.130 336 643 5.9E-84 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily PA257_6403 c3f496ebad4d4e390ab001d502cbf0f1 643 SUPERFAMILY SSF52266 27 327 1.52E-15 T 12-10-2018 PA257_6403 c3f496ebad4d4e390ab001d502cbf0f1 643 Gene3D G3DSA:3.40.50.1110 16 335 3.6E-133 T 12-10-2018 IPR036514 SGNH hydrolase superfamily PA257_6403 c3f496ebad4d4e390ab001d502cbf0f1 643 PIRSF PIRSF037375 1 643 4.7E-220 T 12-10-2018 IPR017186 Lipase, autotransporter EstA PA257_6403 c3f496ebad4d4e390ab001d502cbf0f1 643 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 29 40 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 PA257_6403 c3f496ebad4d4e390ab001d502cbf0f1 643 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 29 322 8.2E-14 T 12-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 PA257_6403 c3f496ebad4d4e390ab001d502cbf0f1 643 SUPERFAMILY SSF103515 346 643 5.36E-47 T 12-10-2018 IPR036709 Autotransporter beta-domain superfamily PA257_6403 c3f496ebad4d4e390ab001d502cbf0f1 643 SMART SM00869 367 633 1.9E-36 T 12-10-2018 IPR005546 Autotransporter beta-domain PA257_6403 c3f496ebad4d4e390ab001d502cbf0f1 643 Pfam PF03797 Autotransporter beta-domain 371 623 7.6E-48 T 12-10-2018 IPR005546 Autotransporter beta-domain PA257_3757 9afc05e40922162512c2f48a5e9905a3 145 Gene3D G3DSA:1.10.760.10 46 144 5.2E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3757 9afc05e40922162512c2f48a5e9905a3 145 SUPERFAMILY SSF46626 11 141 5.22E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3757 9afc05e40922162512c2f48a5e9905a3 145 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 11 143 8.1E-64 T 12-10-2018 IPR030991 Cytochrome c-550 PedF PA257_3757 9afc05e40922162512c2f48a5e9905a3 145 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 62 138 8.5E-14 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_2070 843682ae9a6241101f5f1b2b4f53bedb 279 Gene3D G3DSA:3.90.25.10 129 261 2.2E-65 T 12-10-2018 PA257_2070 843682ae9a6241101f5f1b2b4f53bedb 279 SUPERFAMILY SSF51735 3 254 8.11E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2070 843682ae9a6241101f5f1b2b4f53bedb 279 Pfam PF13460 NAD(P)H-binding 9 175 3.3E-13 T 12-10-2018 IPR016040 NAD(P)-binding domain PA257_2070 843682ae9a6241101f5f1b2b4f53bedb 279 Gene3D G3DSA:3.40.50.720 6 259 2.2E-65 T 12-10-2018 PA257_2659 52d4df9d1432765a7f05981dddf373f7 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 363 508 2.4E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_2659 52d4df9d1432765a7f05981dddf373f7 815 Gene3D G3DSA:1.10.540.10 125 238 1.1E-101 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_2659 52d4df9d1432765a7f05981dddf373f7 815 SUPERFAMILY SSF47203 363 513 4.83E-27 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_2659 52d4df9d1432765a7f05981dddf373f7 815 Pfam PF09317 Domain of unknown function (DUF1974) 517 802 4.1E-105 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 PA257_2659 52d4df9d1432765a7f05981dddf373f7 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 137 236 5.5E-19 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_2659 52d4df9d1432765a7f05981dddf373f7 815 SUPERFAMILY SSF56645 123 358 1.16E-46 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_2659 52d4df9d1432765a7f05981dddf373f7 815 Gene3D G3DSA:1.20.140.10 363 508 1.1E-101 T 12-10-2018 PA257_2659 52d4df9d1432765a7f05981dddf373f7 815 Gene3D G3DSA:2.40.110.10 239 362 1.1E-101 T 12-10-2018 PA257_2659 52d4df9d1432765a7f05981dddf373f7 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 240 337 1.0E-8 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_4888 36ae13252a37c70c66fc5e54487903d2 411 Pfam PF03631 Virulence factor BrkB 22 266 7.7E-59 T 12-10-2018 IPR017039 Virulence factor BrkB PA257_4888 36ae13252a37c70c66fc5e54487903d2 411 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 11 267 2.6E-74 T 12-10-2018 IPR017039 Virulence factor BrkB PA257_4888 36ae13252a37c70c66fc5e54487903d2 411 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 9 292 23.632 T 12-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial PA257_4118 885429cfa6d0d7927d88552308bbf46b 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 3 158 5.7E-51 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PA257_4118 885429cfa6d0d7927d88552308bbf46b 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 158 8.8E-53 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PA257_4118 885429cfa6d0d7927d88552308bbf46b 168 PIRSF PIRSF028301 1 168 1.0E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PA257_3103 8e875945d6dccdcbc96b5ac12e2cc147 232 Gene3D G3DSA:3.90.850.10 2 232 4.7E-84 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_3103 8e875945d6dccdcbc96b5ac12e2cc147 232 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 231 5.7E-52 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PA257_3103 8e875945d6dccdcbc96b5ac12e2cc147 232 SUPERFAMILY SSF56529 21 232 9.03E-68 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 SUPERFAMILY SSF51735 5 244 1.37E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 Gene3D G3DSA:3.40.50.720 2 244 3.2E-76 T 12-10-2018 PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 189 2.1E-6 T 12-10-2018 PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.0E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.0E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.0E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 2.3E-59 T 12-10-2018 PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.6E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.6E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.6E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.6E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.6E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4850 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0340 23a56591701a20c65d6980129360774c 171 Pfam PF06127 Protein of unknown function (DUF962) 1 143 1.4E-27 T 12-10-2018 IPR009305 Protein of unknown function DUF962 PA257_6432 9c8b9575cbb7925b7c3f906d50873e52 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 250 3.4E-18 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6432 9c8b9575cbb7925b7c3f906d50873e52 250 SUPERFAMILY SSF53850 30 250 7.29E-35 T 12-10-2018 PA257_6432 9c8b9575cbb7925b7c3f906d50873e52 250 Gene3D G3DSA:3.40.190.10 119 210 1.1E-24 T 12-10-2018 PA257_6432 9c8b9575cbb7925b7c3f906d50873e52 250 Gene3D G3DSA:3.40.190.10 34 248 1.1E-24 T 12-10-2018 PA257_3820 bd73880ac5db3a211bc28102da2d50e8 635 Gene3D G3DSA:2.170.130.10 16 145 1.7E-41 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_3820 bd73880ac5db3a211bc28102da2d50e8 635 Pfam PF00593 TonB dependent receptor 225 631 8.4E-62 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_3820 bd73880ac5db3a211bc28102da2d50e8 635 Gene3D G3DSA:2.40.170.20 151 635 1.2E-136 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_3820 bd73880ac5db3a211bc28102da2d50e8 635 SUPERFAMILY SSF56935 19 635 2.11E-127 T 12-10-2018 PA257_3820 bd73880ac5db3a211bc28102da2d50e8 635 Pfam PF07715 TonB-dependent Receptor Plug Domain 32 140 1.0E-26 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_4537 d0a627e32d0bf9ca5cd9722959a95d0d 480 SUPERFAMILY SSF103473 213 469 8.11E-25 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4537 d0a627e32d0bf9ca5cd9722959a95d0d 480 Pfam PF07690 Major Facilitator Superfamily 19 420 1.2E-42 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4537 d0a627e32d0bf9ca5cd9722959a95d0d 480 SUPERFAMILY SSF103473 8 198 9.16E-40 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4537 d0a627e32d0bf9ca5cd9722959a95d0d 480 Gene3D G3DSA:1.20.1720.10 15 226 5.0E-46 T 12-10-2018 PA257_4537 d0a627e32d0bf9ca5cd9722959a95d0d 480 Gene3D G3DSA:1.20.1250.20 274 471 1.2E-10 T 12-10-2018 PA257_3526 2072046db6c1de46aceab277d4ac7ff0 238 SUPERFAMILY SSF161098 13 217 2.49E-41 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3526 2072046db6c1de46aceab277d4ac7ff0 238 Gene3D G3DSA:1.10.3720.10 6 234 2.9E-48 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3526 2072046db6c1de46aceab277d4ac7ff0 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 229 1.5E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3526 2072046db6c1de46aceab277d4ac7ff0 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 80 9.9E-20 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_4830 e5be5ef4befefbea40a6cf4ad2364dad 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_4830 e5be5ef4befefbea40a6cf4ad2364dad 517 Pfam PF00501 AMP-binding enzyme 18 404 3.1E-73 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_4830 e5be5ef4befefbea40a6cf4ad2364dad 517 Gene3D G3DSA:3.30.300.30 399 507 1.2E-19 T 12-10-2018 PA257_4830 e5be5ef4befefbea40a6cf4ad2364dad 517 Gene3D G3DSA:3.40.50.12780 10 397 2.5E-88 T 12-10-2018 PA257_4830 e5be5ef4befefbea40a6cf4ad2364dad 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 414 493 1.4E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_4830 e5be5ef4befefbea40a6cf4ad2364dad 517 SUPERFAMILY SSF56801 14 505 1.44E-112 T 12-10-2018 PA257_2170 bcf5bb6b7b5d8d3e70c8b696b6733364 149 Gene3D G3DSA:2.60.40.790 35 140 1.3E-21 T 12-10-2018 IPR008978 HSP20-like chaperone PA257_2170 bcf5bb6b7b5d8d3e70c8b696b6733364 149 Pfam PF00011 Hsp20/alpha crystallin family 44 140 3.3E-17 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain PA257_2170 bcf5bb6b7b5d8d3e70c8b696b6733364 149 SUPERFAMILY SSF49764 11 141 2.51E-21 T 12-10-2018 IPR008978 HSP20-like chaperone PA257_2531 0d9435c8084409c3f0d2de871ddde24f 171 Gene3D G3DSA:3.30.1060.10 4 170 5.6E-65 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2531 0d9435c8084409c3f0d2de871ddde24f 171 SUPERFAMILY SSF55068 5 161 1.1E-58 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2531 0d9435c8084409c3f0d2de871ddde24f 171 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 159 31.377 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2531 0d9435c8084409c3f0d2de871ddde24f 171 Pfam PF01625 Peptide methionine sulfoxide reductase 6 153 2.0E-50 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2531 0d9435c8084409c3f0d2de871ddde24f 171 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 153 1.0E-44 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_3047 931d0cd9b6f949130379e095984c0695 472 Gene3D G3DSA:1.10.287.130 199 315 5.9E-21 T 12-10-2018 PA257_3047 931d0cd9b6f949130379e095984c0695 472 SUPERFAMILY SSF47384 232 314 9.42E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_3047 931d0cd9b6f949130379e095984c0695 472 SMART SM00304 195 248 1.5E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_3047 931d0cd9b6f949130379e095984c0695 472 SMART SM00387 358 470 1.2E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3047 931d0cd9b6f949130379e095984c0695 472 Pfam PF00672 HAMP domain 195 244 3.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_3047 931d0cd9b6f949130379e095984c0695 472 SUPERFAMILY SSF55874 305 468 5.37E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3047 931d0cd9b6f949130379e095984c0695 472 SUPERFAMILY SSF158472 198 245 4.84E-7 T 12-10-2018 PA257_3047 931d0cd9b6f949130379e095984c0695 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 9.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3047 931d0cd9b6f949130379e095984c0695 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 9.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3047 931d0cd9b6f949130379e095984c0695 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 9.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_3047 931d0cd9b6f949130379e095984c0695 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 313 4.0E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3047 931d0cd9b6f949130379e095984c0695 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 468 5.9E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3047 931d0cd9b6f949130379e095984c0695 472 Gene3D G3DSA:3.30.565.10 323 470 4.0E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_3047 931d0cd9b6f949130379e095984c0695 472 SMART SM00388 249 315 1.8E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3047 931d0cd9b6f949130379e095984c0695 472 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 5 467 6.6E-179 T 12-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 68 202 1.5E-33 T 12-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 Gene3D G3DSA:1.10.357.10 63 204 2.5E-34 T 12-10-2018 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 6.3E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 SUPERFAMILY SSF46689 5 64 7.7E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00400 Tetracycline repressor protein signature 75 94 4.1E-52 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00400 Tetracycline repressor protein signature 21 44 4.1E-52 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00400 Tetracycline repressor protein signature 130 149 4.1E-52 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00400 Tetracycline repressor protein signature 95 118 4.1E-52 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00400 Tetracycline repressor protein signature 185 199 4.1E-52 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 Gene3D G3DSA:1.10.10.60 1 62 7.7E-28 T 12-10-2018 PA257_5248 695ec09fa6b44c84b34b09688de5dd4c 208 SUPERFAMILY SSF48498 68 204 3.11E-35 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 68 202 1.5E-33 T 12-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 Gene3D G3DSA:1.10.357.10 63 204 2.5E-34 T 12-10-2018 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 6.3E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 SUPERFAMILY SSF46689 5 64 7.7E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00400 Tetracycline repressor protein signature 75 94 4.1E-52 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00400 Tetracycline repressor protein signature 21 44 4.1E-52 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00400 Tetracycline repressor protein signature 130 149 4.1E-52 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00400 Tetracycline repressor protein signature 95 118 4.1E-52 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 PRINTS PR00400 Tetracycline repressor protein signature 185 199 4.1E-52 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 Gene3D G3DSA:1.10.10.60 1 62 7.7E-28 T 12-10-2018 PA257_0304 695ec09fa6b44c84b34b09688de5dd4c 208 SUPERFAMILY SSF48498 68 204 3.11E-35 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.2E-78 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 PIRSF PIRSF002560 1 157 2.8E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 Pfam PF00210 Ferritin-like domain 8 143 5.4E-40 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 128 149 2.0E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 107 127 2.0E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 65 85 2.0E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 3 22 2.0E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 86 106 2.0E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 23 43 2.0E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 44 64 2.0E-73 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 SUPERFAMILY SSF47240 1 154 7.93E-54 T 12-10-2018 IPR009078 Ferritin-like superfamily PA257_1752 e9858ce5bdf1b8029c2df44b2926fcd5 158 Gene3D G3DSA:1.20.1260.10 1 158 2.3E-71 T 12-10-2018 IPR012347 Ferritin-like PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.3E-113 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.3E-113 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 4.3E-113 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 4.3E-113 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.3E-113 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.3E-113 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.3E-113 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.3E-113 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.3E-113 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1043 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 SUPERFAMILY SSF82866 296 497 1.07E-49 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 SUPERFAMILY SSF82693 38 130 1.8E-28 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 SUPERFAMILY SSF82693 135 330 2.04E-26 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 Gene3D G3DSA:3.30.70.1430 38 819 0.0 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 Gene3D G3DSA:3.30.2090.10 723 811 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 Gene3D G3DSA:1.20.1640.10 8 514 0.0 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 Gene3D G3DSA:3.30.70.1430 569 670 0.0 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 SUPERFAMILY SSF82714 182 271 1.07E-22 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 Gene3D G3DSA:3.30.70.1440 671 867 0.0 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 SUPERFAMILY SSF82693 567 671 1.31E-30 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 SUPERFAMILY SSF82714 724 811 9.16E-23 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 SUPERFAMILY SSF82866 808 1027 1.96E-46 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 Gene3D G3DSA:1.20.1640.10 515 1024 0.0 T 12-10-2018 PA257_0562 f54b11cb7c69e3885a9af2cc7ca045d1 1046 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PA257_1725 4ac1b8500606c5eb9c81ec5e2e96300e 115 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 115 28.859 T 12-10-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE PA257_1725 4ac1b8500606c5eb9c81ec5e2e96300e 115 SUPERFAMILY SSF103481 33 113 2.09E-13 T 12-10-2018 PA257_1725 4ac1b8500606c5eb9c81ec5e2e96300e 115 Pfam PF00892 EamA-like transporter family 38 111 5.6E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_1725 4ac1b8500606c5eb9c81ec5e2e96300e 115 Gene3D G3DSA:1.10.3730.20 4 115 3.5E-9 T 12-10-2018 PA257_0658 54a39537035cc365f25924c87f8a3b31 119 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 42 109 1.1E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0658 54a39537035cc365f25924c87f8a3b31 119 Gene3D G3DSA:1.10.760.10 28 110 7.7E-13 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0658 54a39537035cc365f25924c87f8a3b31 119 SUPERFAMILY SSF46626 14 110 7.98E-16 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_2368 bf4070df514bf78ae549f9c3966a6daa 184 SUPERFAMILY SSF53300 30 146 1.33E-14 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_2368 bf4070df514bf78ae549f9c3966a6daa 184 Gene3D G3DSA:3.40.50.410 28 183 1.2E-11 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_2368 bf4070df514bf78ae549f9c3966a6daa 184 Pfam PF13519 von Willebrand factor type A domain 29 134 1.2E-9 T 12-10-2018 IPR002035 von Willebrand factor, type A PA257_6686 682fd3b664749045b568670116c23c16 106 SUPERFAMILY SSF55298 1 106 2.2E-32 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_6686 682fd3b664749045b568670116c23c16 106 Pfam PF01042 Endoribonuclease L-PSP 2 104 2.1E-24 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PA257_6686 682fd3b664749045b568670116c23c16 106 Gene3D G3DSA:3.30.1330.40 1 105 1.3E-37 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_3962 20b9af595139ee75a40b2ba19d705996 235 SMART SM00448 7 117 1.1E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3962 20b9af595139ee75a40b2ba19d705996 235 Gene3D G3DSA:3.40.50.2300 5 119 3.9E-32 T 12-10-2018 PA257_3962 20b9af595139ee75a40b2ba19d705996 235 SMART SM00862 152 228 1.3E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_3962 20b9af595139ee75a40b2ba19d705996 235 SUPERFAMILY SSF52172 8 131 4.13E-37 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3962 20b9af595139ee75a40b2ba19d705996 235 SUPERFAMILY SSF46894 129 229 3.12E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_3962 20b9af595139ee75a40b2ba19d705996 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 3.4E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_3962 20b9af595139ee75a40b2ba19d705996 235 Pfam PF00072 Response regulator receiver domain 9 117 3.1E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3962 20b9af595139ee75a40b2ba19d705996 235 Gene3D G3DSA:1.10.10.10 120 234 3.2E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SUPERFAMILY SSF52129 392 530 6.45E-6 T 12-10-2018 IPR029030 Caspase-like domain superfamily PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:3.40.50.1460 356 545 1.8E-8 T 12-10-2018 PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 198 219 4.1E-5 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 267 288 8.0 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 175 196 3.1 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 152 173 6.6 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 129 150 6.6 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 61 82 13.0 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 38 59 4.0 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 107 128 1.5 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 244 265 21.0 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 84 105 0.56 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:2.20.110.10 136 229 1.6E-12 T 12-10-2018 PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:2.20.110.10 33 135 2.9E-11 T 12-10-2018 PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SUPERFAMILY SSF82185 35 122 2.09E-20 T 12-10-2018 PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 SUPERFAMILY SSF82185 127 248 4.71E-25 T 12-10-2018 PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF01650 Peptidase C13 family 342 547 1.2E-43 T 12-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 86 108 0.12 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 269 291 0.038 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 109 124 0.88 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 40 60 0.039 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 177 199 2.8E-4 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 224 245 0.32 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 131 153 0.0073 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 154 175 0.077 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 200 222 6.7E-6 T 12-10-2018 IPR003409 MORN motif PA257_1136 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 63 85 2.1E-4 T 12-10-2018 IPR003409 MORN motif PA257_6817 8a4e14a79f6ce8d3ddf81732dca20309 305 Gene3D G3DSA:2.70.98.10 2 298 5.9E-76 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 PA257_6817 8a4e14a79f6ce8d3ddf81732dca20309 305 SUPERFAMILY SSF74650 8 296 5.53E-69 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PA257_6817 8a4e14a79f6ce8d3ddf81732dca20309 305 PIRSF PIRSF016020 4 299 3.9E-50 T 12-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 PA257_6817 8a4e14a79f6ce8d3ddf81732dca20309 305 Pfam PF01263 Aldose 1-epimerase 23 298 2.1E-62 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PA257_5830 540af7e72bd4000030403f6cd4d555f4 157 Gene3D G3DSA:2.60.120.10 35 126 2.1E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_5830 540af7e72bd4000030403f6cd4d555f4 157 SUPERFAMILY SSF51182 21 125 1.18E-11 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_5830 540af7e72bd4000030403f6cd4d555f4 157 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 7 138 3.5E-44 T 12-10-2018 IPR027565 Cupin fold metalloprotein, WbuC family PA257_0168 ccc8f49a5f5578e1cf1defe1cc6fdde3 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 109 129 2.4E-14 T 12-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 PA257_0168 ccc8f49a5f5578e1cf1defe1cc6fdde3 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 175 198 2.4E-14 T 12-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 PA257_0168 ccc8f49a5f5578e1cf1defe1cc6fdde3 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 143 168 2.4E-14 T 12-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 PA257_0168 ccc8f49a5f5578e1cf1defe1cc6fdde3 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 52 76 2.4E-14 T 12-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 PA257_0168 ccc8f49a5f5578e1cf1defe1cc6fdde3 282 Gene3D G3DSA:2.40.230.20 20 282 5.5E-91 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 PA257_0168 ccc8f49a5f5578e1cf1defe1cc6fdde3 282 SUPERFAMILY SSF111364 33 282 1.57E-73 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 PA257_0168 ccc8f49a5f5578e1cf1defe1cc6fdde3 282 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 282 2.1E-76 T 12-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PA257_5033 9466520049dc1a01f1a4b64a81c6c347 116 Pfam PF16459 Phage tail assembly chaperone, TAC 5 107 5.2E-20 T 12-10-2018 IPR024410 Phage tail assembly chaperone protein, TAC PA257_1638 e6ee696123cf944f5fb6b534c452ef79 693 Gene3D G3DSA:2.60.40.3940 604 692 7.5E-9 T 12-10-2018 PA257_1638 e6ee696123cf944f5fb6b534c452ef79 693 Pfam PF12571 Phage tail-collar fibre protein 1 153 6.8E-43 T 12-10-2018 IPR022225 Phage tail fibre protein PA257_3865 616c94d41ce25cf1a1c9918d95b0e9f4 193 Gene3D G3DSA:1.10.260.40 11 84 1.2E-19 T 12-10-2018 PA257_3865 616c94d41ce25cf1a1c9918d95b0e9f4 193 SUPERFAMILY SSF47413 11 80 1.8E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_3865 616c94d41ce25cf1a1c9918d95b0e9f4 193 SUPERFAMILY SSF51182 68 190 6.09E-14 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_3865 616c94d41ce25cf1a1c9918d95b0e9f4 193 SMART SM00530 20 75 7.7E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_3865 616c94d41ce25cf1a1c9918d95b0e9f4 193 Pfam PF01381 Helix-turn-helix 21 75 5.0E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_3865 616c94d41ce25cf1a1c9918d95b0e9f4 193 Gene3D G3DSA:2.60.120.10 103 193 4.2E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1459 ef4e5b8e5161e766efe975f861ac4f1a 340 SUPERFAMILY SSF53697 12 338 8.16E-66 T 12-10-2018 PA257_1459 ef4e5b8e5161e766efe975f861ac4f1a 340 Gene3D G3DSA:3.40.50.10490 194 325 3.1E-43 T 12-10-2018 PA257_1459 ef4e5b8e5161e766efe975f861ac4f1a 340 Gene3D G3DSA:3.40.50.10490 1 189 1.8E-35 T 12-10-2018 PA257_1459 ef4e5b8e5161e766efe975f861ac4f1a 340 Pfam PF01380 SIS domain 43 158 1.1E-13 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PA257_1459 ef4e5b8e5161e766efe975f861ac4f1a 340 Pfam PF01380 SIS domain 198 281 5.7E-16 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PA257_1936 49e813d008b7e1a8e0f97cb73be70fbb 657 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 157 210 4.3E-12 T 12-10-2018 IPR020012 Motility protein FimV, N-terminal PA257_1936 49e813d008b7e1a8e0f97cb73be70fbb 657 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 614 655 6.4E-16 T 12-10-2018 IPR020011 Motility protein FimV, C-terminal PA257_1936 49e813d008b7e1a8e0f97cb73be70fbb 657 Gene3D G3DSA:1.20.58.2200 603 657 4.3E-12 T 12-10-2018 IPR038440 FimV, C-terminal domain superfamily PA257_3545 7256fedeb50f249690f8ab19b7548472 316 SUPERFAMILY SSF53335 82 275 2.54E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3545 7256fedeb50f249690f8ab19b7548472 316 Pfam PF05175 Methyltransferase small domain 131 252 7.7E-16 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PA257_3545 7256fedeb50f249690f8ab19b7548472 316 Gene3D G3DSA:3.40.50.150 104 260 1.4E-29 T 12-10-2018 PA257_3545 7256fedeb50f249690f8ab19b7548472 316 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_6879 bae0054996cb549c43a6b614627e8eda 346 PIRSF PIRSF029727 1 346 6.7E-182 T 12-10-2018 IPR016937 Uncharacterised conserved protein UCP029727 PA257_6879 bae0054996cb549c43a6b614627e8eda 346 Pfam PF11141 Protein of unknown function (DUF2914) 279 344 2.6E-24 T 12-10-2018 IPR022606 Protein of unknown function DUF2914 PA257_1328 52833517acaa2089fe7b4724e694cad4 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1328 52833517acaa2089fe7b4724e694cad4 264 SUPERFAMILY SSF52540 1 233 8.48E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1328 52833517acaa2089fe7b4724e694cad4 264 Gene3D G3DSA:3.40.50.300 1 252 1.7E-56 T 12-10-2018 PA257_1328 52833517acaa2089fe7b4724e694cad4 264 SMART SM00382 31 225 8.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1328 52833517acaa2089fe7b4724e694cad4 264 Pfam PF00005 ABC transporter 22 177 7.3E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4393 201428d547d29e59ef13ab97280d169e 221 Gene3D G3DSA:3.40.50.150 34 216 1.6E-39 T 12-10-2018 PA257_4393 201428d547d29e59ef13ab97280d169e 221 SUPERFAMILY SSF53335 46 190 3.51E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_4393 201428d547d29e59ef13ab97280d169e 221 Pfam PF13578 Methyltransferase domain 84 187 2.3E-15 T 12-10-2018 PA257_0056 7d24d1ff895f38f5093f5a9969a6d9ad 89 Gene3D G3DSA:3.30.70.1290 1 88 5.4E-16 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 PA257_0056 7d24d1ff895f38f5093f5a9969a6d9ad 89 SUPERFAMILY SSF143422 3 87 8.5E-18 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 PA257_0056 7d24d1ff895f38f5093f5a9969a6d9ad 89 SMART SM01321 2 89 3.6E-11 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PA257_0056 7d24d1ff895f38f5093f5a9969a6d9ad 89 Pfam PF01797 Transposase IS200 like 5 87 1.1E-10 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PA257_5029 65db873fd904b486bd5241cc6a16508a 260 Gene3D G3DSA:3.90.1720.10 114 256 3.0E-7 T 12-10-2018 PA257_5029 65db873fd904b486bd5241cc6a16508a 260 Gene3D G3DSA:3.40.140.10 1 113 1.1E-19 T 12-10-2018 PA257_5029 65db873fd904b486bd5241cc6a16508a 260 SMART SM00232 1 127 2.1E-9 T 12-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 PA257_5029 65db873fd904b486bd5241cc6a16508a 260 Pfam PF00877 NlpC/P60 family 119 222 1.2E-10 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain PA257_5029 65db873fd904b486bd5241cc6a16508a 260 SUPERFAMILY SSF102712 1 131 1.57E-20 T 12-10-2018 PA257_5029 65db873fd904b486bd5241cc6a16508a 260 Pfam PF14464 Prokaryotic homologs of the JAB domain 6 100 2.2E-14 T 12-10-2018 IPR028090 JAB domain, prokaryotic PA257_5029 65db873fd904b486bd5241cc6a16508a 260 SUPERFAMILY SSF54001 113 257 8.14E-8 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_1300 03cdd3616f14ed221e3ccb71eeb5063d 210 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 9 110 5.0E-53 T 12-10-2018 IPR013559 YheO-like PA257_1300 03cdd3616f14ed221e3ccb71eeb5063d 210 Pfam PF13309 HTH domain 142 203 1.9E-16 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain PA257_1300 03cdd3616f14ed221e3ccb71eeb5063d 210 Pfam PF08348 YheO-like PAS domain 9 114 4.6E-26 T 12-10-2018 IPR013559 YheO-like PA257_0575 28704e1ce7c27a53532e17b8150561d1 416 Gene3D G3DSA:1.10.4160.10 2 413 6.8E-44 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily PA257_0575 28704e1ce7c27a53532e17b8150561d1 416 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 8.9E-60 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 PA257_1351 7c5b8f4d4100a7c0e26ebff6e2b69368 257 PIRSF PIRSF004808 1 251 2.1E-72 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 PA257_1351 7c5b8f4d4100a7c0e26ebff6e2b69368 257 Pfam PF00588 SpoU rRNA Methylase family 5 155 2.9E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PA257_1351 7c5b8f4d4100a7c0e26ebff6e2b69368 257 SUPERFAMILY SSF75217 4 170 1.18E-38 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases PA257_1351 7c5b8f4d4100a7c0e26ebff6e2b69368 257 Gene3D G3DSA:1.10.8.590 182 245 8.9E-24 T 12-10-2018 PA257_1351 7c5b8f4d4100a7c0e26ebff6e2b69368 257 Gene3D G3DSA:3.40.1280.10 1 167 4.7E-72 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PA257_1351 7c5b8f4d4100a7c0e26ebff6e2b69368 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 245 6.4E-76 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 PA257_1868 c219bedf11c01fb551b60628c5e540e2 451 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 437 2.6E-113 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 PA257_1868 c219bedf11c01fb551b60628c5e540e2 451 Pfam PF02321 Outer membrane efflux protein 239 423 1.2E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_1868 c219bedf11c01fb551b60628c5e540e2 451 Pfam PF02321 Outer membrane efflux protein 24 212 2.6E-19 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_1868 c219bedf11c01fb551b60628c5e540e2 451 SUPERFAMILY SSF56954 22 437 3.4E-79 T 12-10-2018 PA257_1868 c219bedf11c01fb551b60628c5e540e2 451 Gene3D G3DSA:1.20.1600.10 23 441 1.8E-88 T 12-10-2018 PA257_4263 07fe6dbe743805e999cffbafc89212da 377 Pfam PF00487 Fatty acid desaturase 115 329 1.2E-26 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PA257_4299 2b4328244c64e07cff5c032ead6025eb 551 Pfam PF13598 Domain of unknown function (DUF4139) 221 543 2.0E-64 T 12-10-2018 IPR037291 Domain of unknown function DUF4139 PA257_4299 2b4328244c64e07cff5c032ead6025eb 551 Pfam PF13600 N-terminal domain of unknown function (DUF4140) 34 133 7.9E-23 T 12-10-2018 IPR025554 Domain of unknown function DUF4140 PA257_4299 2b4328244c64e07cff5c032ead6025eb 551 TIGRFAM TIGR02231 TIGR02231: conserved hypothetical protein 30 547 8.0E-207 T 12-10-2018 IPR011935 Conserved hypothetical protein CHP02231 PA257_3964 4f705a706f283c6143a5edd236e0ec2c 610 Gene3D G3DSA:3.40.710.10 38 377 3.7E-70 T 12-10-2018 PA257_3964 4f705a706f283c6143a5edd236e0ec2c 610 Pfam PF00144 Beta-lactamase 43 378 6.4E-60 T 12-10-2018 IPR001466 Beta-lactamase-related PA257_3964 4f705a706f283c6143a5edd236e0ec2c 610 SUPERFAMILY SSF56601 34 381 5.25E-69 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_4969 9047df04cd1bdaeab8ef3c3dbaa0302c 316 Pfam PF03466 LysR substrate binding domain 90 297 8.3E-38 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4969 9047df04cd1bdaeab8ef3c3dbaa0302c 316 SUPERFAMILY SSF46785 7 113 1.9E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4969 9047df04cd1bdaeab8ef3c3dbaa0302c 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.0E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4969 9047df04cd1bdaeab8ef3c3dbaa0302c 316 SUPERFAMILY SSF53850 92 300 4.16E-40 T 12-10-2018 PA257_4969 9047df04cd1bdaeab8ef3c3dbaa0302c 316 Gene3D G3DSA:3.40.190.290 93 297 1.0E-55 T 12-10-2018 PA257_4969 9047df04cd1bdaeab8ef3c3dbaa0302c 316 Gene3D G3DSA:1.10.10.10 4 88 1.6E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0567 5f9e21c3288fbd6c30cea5dffa82647a 179 Gene3D G3DSA:1.10.3210.10 1 177 9.6E-35 T 12-10-2018 PA257_0567 5f9e21c3288fbd6c30cea5dffa82647a 179 SUPERFAMILY SSF109604 3 159 2.95E-31 T 12-10-2018 PA257_0567 5f9e21c3288fbd6c30cea5dffa82647a 179 Pfam PF13328 HD domain 12 159 1.4E-10 T 12-10-2018 IPR003607 HD/PDEase domain PA257_4954 9104f3c280de002587a058c9a4725f41 370 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 145 357 1.4E-16 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 PA257_4954 9104f3c280de002587a058c9a4725f41 370 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 29 109 1.0E-8 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 PA257_4954 9104f3c280de002587a058c9a4725f41 370 Gene3D G3DSA:3.40.630.10 6 285 1.8E-71 T 12-10-2018 PA257_4954 9104f3c280de002587a058c9a4725f41 370 SUPERFAMILY SSF53187 18 363 6.95E-43 T 12-10-2018 PA257_1951 4e7ad28a6a65d12df634d2d52a373ddb 295 Pfam PF10118 Predicted metal-dependent hydrolase 10 273 1.8E-72 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 PA257_1951 4e7ad28a6a65d12df634d2d52a373ddb 295 PIRSF PIRSF007580 1 293 7.1E-120 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 34 54 1.5E-10 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 1.5E-10 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 56 72 1.5E-10 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 1.5E-10 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 SUPERFAMILY SSF56655 6 265 1.7E-72 T 12-10-2018 PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 Gene3D G3DSA:3.30.540.10 4 148 4.8E-41 T 12-10-2018 PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 Pfam PF00459 Inositol monophosphatase family 7 241 8.6E-48 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 6 251 1.9E-85 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 Gene3D G3DSA:3.40.190.80 149 255 5.4E-31 T 12-10-2018 PA257_6526 607cb34a47a59dd20efaf2c6fa0a1167 270 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 2 254 38.685 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 PA257_6627 4ebfa15d464616340324d74b06157dc5 950 Pfam PF01295 Adenylate cyclase, class-I 244 844 5.8E-120 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 PA257_6627 4ebfa15d464616340324d74b06157dc5 950 PIRSF PIRSF001444 16 931 0.0 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 PA257_6627 4ebfa15d464616340324d74b06157dc5 950 Pfam PF12633 Adenylate cyclase NT domain 21 217 1.7E-71 T 12-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 PA257_0394 643d62b2f93351123912de2e8fe6fb08 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 297 5.2E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0394 643d62b2f93351123912de2e8fe6fb08 309 Gene3D G3DSA:1.10.3720.10 21 304 3.2E-52 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0394 643d62b2f93351123912de2e8fe6fb08 309 SUPERFAMILY SSF161098 19 300 2.43E-54 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6684 de607ecd043cf1e84278d32a59bf1038 182 Gene3D G3DSA:2.60.120.10 77 176 3.3E-17 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_6684 de607ecd043cf1e84278d32a59bf1038 182 SUPERFAMILY SSF51182 46 182 4.01E-27 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_6684 de607ecd043cf1e84278d32a59bf1038 182 SUPERFAMILY SSF47413 3 67 1.27E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_6684 de607ecd043cf1e84278d32a59bf1038 182 Pfam PF01381 Helix-turn-helix 8 59 1.4E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_6684 de607ecd043cf1e84278d32a59bf1038 182 SMART SM00530 6 61 4.3E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_6684 de607ecd043cf1e84278d32a59bf1038 182 Gene3D G3DSA:1.10.260.40 2 69 2.4E-16 T 12-10-2018 PA257_6684 de607ecd043cf1e84278d32a59bf1038 182 Pfam PF07883 Cupin domain 108 175 1.2E-19 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_2107 e402a09417f503097ac75adf0e849339 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2107 e402a09417f503097ac75adf0e849339 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 477 1.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2107 e402a09417f503097ac75adf0e849339 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2107 e402a09417f503097ac75adf0e849339 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 1.5E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2107 e402a09417f503097ac75adf0e849339 482 Pfam PF00672 HAMP domain 227 274 2.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2107 e402a09417f503097ac75adf0e849339 482 SUPERFAMILY SSF47384 263 322 1.79E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2107 e402a09417f503097ac75adf0e849339 482 Gene3D G3DSA:3.30.565.10 337 478 2.4E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2107 e402a09417f503097ac75adf0e849339 482 SUPERFAMILY SSF158472 228 276 6.54E-5 T 12-10-2018 PA257_2107 e402a09417f503097ac75adf0e849339 482 SUPERFAMILY SSF55874 338 478 4.58E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2107 e402a09417f503097ac75adf0e849339 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 477 1.8E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2107 e402a09417f503097ac75adf0e849339 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 280 317 5.4E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_2107 e402a09417f503097ac75adf0e849339 482 SMART SM00387 375 480 2.6E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2107 e402a09417f503097ac75adf0e849339 482 Gene3D G3DSA:1.10.287.130 230 336 3.9E-19 T 12-10-2018 PA257_2107 e402a09417f503097ac75adf0e849339 482 SMART SM00304 226 278 3.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_2107 e402a09417f503097ac75adf0e849339 482 SMART SM00388 279 337 1.8E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_3064 5c594d6e56995f6bd1dbca22ce67f8f5 369 SUPERFAMILY SSF51604 125 366 3.54E-61 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PA257_3064 5c594d6e56995f6bd1dbca22ce67f8f5 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 9 125 1.2E-35 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PA257_3064 5c594d6e56995f6bd1dbca22ce67f8f5 369 SMART SM00922 143 241 3.5E-17 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PA257_3064 5c594d6e56995f6bd1dbca22ce67f8f5 369 Pfam PF13378 Enolase C-terminal domain-like 148 361 2.6E-44 T 12-10-2018 IPR029065 Enolase C-terminal domain-like PA257_3064 5c594d6e56995f6bd1dbca22ce67f8f5 369 SUPERFAMILY SSF54826 2 126 1.4E-32 T 12-10-2018 PA257_3064 5c594d6e56995f6bd1dbca22ce67f8f5 369 Gene3D G3DSA:3.20.20.120 118 353 2.7E-121 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PA257_3064 5c594d6e56995f6bd1dbca22ce67f8f5 369 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 2 368 9.0E-152 T 12-10-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 PA257_3064 5c594d6e56995f6bd1dbca22ce67f8f5 369 Gene3D G3DSA:3.30.390.10 8 361 2.7E-121 T 12-10-2018 IPR029017 Enolase-like, N-terminal PA257_3064 5c594d6e56995f6bd1dbca22ce67f8f5 369 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 191 222 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PA257_3064 5c594d6e56995f6bd1dbca22ce67f8f5 369 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 100 125 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PA257_3737 fde449868abc0f2894e1a21cdef1b356 474 Pfam PF02667 Short chain fatty acid transporter 14 458 5.6E-83 T 12-10-2018 IPR006160 Short chain fatty acid transporter AtoE PA257_6369 7052ac878880fc61d82f82aa91959fe1 861 SUPERFAMILY SSF53448 247 533 8.06E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6369 7052ac878880fc61d82f82aa91959fe1 861 Pfam PF00535 Glycosyl transferase family 2 249 431 1.6E-23 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_6369 7052ac878880fc61d82f82aa91959fe1 861 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 72 748 52.273 T 12-10-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 PA257_6369 7052ac878880fc61d82f82aa91959fe1 861 Gene3D G3DSA:3.90.550.10 245 471 3.3E-15 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4204 1a7e41dde6071936e374bb0ce79d4d65 202 PIRSF PIRSF039033 1 202 3.3E-82 T 12-10-2018 IPR028347 START domain-containing protein PA257_4204 1a7e41dde6071936e374bb0ce79d4d65 202 Gene3D G3DSA:3.30.530.20 23 202 5.2E-62 T 12-10-2018 IPR023393 START-like domain superfamily PA257_4204 1a7e41dde6071936e374bb0ce79d4d65 202 SUPERFAMILY SSF55961 22 201 5.5E-39 T 12-10-2018 PA257_4204 1a7e41dde6071936e374bb0ce79d4d65 202 Pfam PF01852 START domain 23 198 4.9E-15 T 12-10-2018 IPR002913 START domain GO:0008289 PA257_6708 0565399fdd6a16dabdfefb209db00a2c 301 SUPERFAMILY SSF53633 8 298 1.19E-98 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_6708 0565399fdd6a16dabdfefb209db00a2c 301 Gene3D G3DSA:3.40.1160.10 2 301 1.1E-105 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_6708 0565399fdd6a16dabdfefb209db00a2c 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 272 2.9E-78 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PA257_6708 0565399fdd6a16dabdfefb209db00a2c 301 PIRSF PIRSF000728 13 297 2.5E-111 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PA257_6708 0565399fdd6a16dabdfefb209db00a2c 301 Pfam PF00696 Amino acid kinase family 28 274 7.7E-44 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PA257_6708 0565399fdd6a16dabdfefb209db00a2c 301 Hamap MF_00082 Acetylglutamate kinase [argB]. 27 290 52.208 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PA257_6708 0565399fdd6a16dabdfefb209db00a2c 301 PRINTS PR00474 Glutamate 5-kinase family signature 247 267 2.7E-8 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PA257_6708 0565399fdd6a16dabdfefb209db00a2c 301 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 2.7E-8 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PA257_6708 0565399fdd6a16dabdfefb209db00a2c 301 PRINTS PR00474 Glutamate 5-kinase family signature 197 224 2.7E-8 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PA257_4253 87a976d9f45c1381503d678cdade9818 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 122 5.2E-27 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_4253 87a976d9f45c1381503d678cdade9818 382 Gene3D G3DSA:1.10.540.10 6 124 6.5E-34 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_4253 87a976d9f45c1381503d678cdade9818 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 7.7E-46 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_4253 87a976d9f45c1381503d678cdade9818 382 SUPERFAMILY SSF47203 231 380 3.22E-47 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_4253 87a976d9f45c1381503d678cdade9818 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 220 1.2E-23 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_4253 87a976d9f45c1381503d678cdade9818 382 Gene3D G3DSA:1.20.140.10 238 382 1.3E-46 T 12-10-2018 PA257_4253 87a976d9f45c1381503d678cdade9818 382 Gene3D G3DSA:2.40.110.10 126 237 2.8E-42 T 12-10-2018 PA257_4253 87a976d9f45c1381503d678cdade9818 382 SUPERFAMILY SSF56645 5 244 5.1E-74 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_4253 87a976d9f45c1381503d678cdade9818 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 Pfam PF00106 short chain dehydrogenase 5 188 5.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.5E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.5E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.5E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.5E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 SUPERFAMILY SSF51735 4 236 1.01E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1282 3b8259947302c0455f74716ea9ad2f7a 276 Gene3D G3DSA:3.40.50.720 2 256 3.7E-61 T 12-10-2018 PA257_5565 ecb8bf67caf3671e91d6d9ceee945d50 537 Gene3D G3DSA:3.90.76.10 45 211 3.8E-169 T 12-10-2018 PA257_5565 ecb8bf67caf3671e91d6d9ceee945d50 537 SUPERFAMILY SSF53850 32 534 1.52E-152 T 12-10-2018 PA257_5565 ecb8bf67caf3671e91d6d9ceee945d50 537 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site PA257_5565 ecb8bf67caf3671e91d6d9ceee945d50 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 454 3.4E-102 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain PA257_5565 ecb8bf67caf3671e91d6d9ceee945d50 537 Gene3D G3DSA:3.40.190.10 212 524 3.8E-169 T 12-10-2018 PA257_5565 ecb8bf67caf3671e91d6d9ceee945d50 537 Gene3D G3DSA:3.10.105.10 294 511 3.8E-169 T 12-10-2018 PA257_5565 ecb8bf67caf3671e91d6d9ceee945d50 537 PIRSF PIRSF002741 22 535 2.3E-118 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PA257_1049 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 6.2E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1049 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.2E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1049 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 6.2E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1049 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 6.2E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1049 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 6.2E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1049 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.2E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1049 6d61a17e115da725efe65781f77971eb 241 Gene3D G3DSA:3.40.50.720 1 241 3.3E-81 T 12-10-2018 PA257_1049 6d61a17e115da725efe65781f77971eb 241 SUPERFAMILY SSF51735 10 239 3.25E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1049 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1049 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1049 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1049 6d61a17e115da725efe65781f77971eb 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_1049 6d61a17e115da725efe65781f77971eb 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 238 1.7E-57 T 12-10-2018 PA257_6821 5e3e80101f8bf5de12f7a7cc3961f9d5 140 Gene3D G3DSA:3.40.50.7700 1 140 2.0E-62 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 PA257_6821 5e3e80101f8bf5de12f7a7cc3961f9d5 140 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 135 24.676 T 12-10-2018 IPR033747 Class I PurE PA257_6821 5e3e80101f8bf5de12f7a7cc3961f9d5 140 SUPERFAMILY SSF52255 1 137 1.28E-57 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 PA257_6821 5e3e80101f8bf5de12f7a7cc3961f9d5 140 Pfam PF00731 AIR carboxylase 1 129 3.2E-54 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PA257_6821 5e3e80101f8bf5de12f7a7cc3961f9d5 140 SMART SM01001 1 131 2.1E-77 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PA257_6821 5e3e80101f8bf5de12f7a7cc3961f9d5 140 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 136 1.0E-57 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PA257_6821 5e3e80101f8bf5de12f7a7cc3961f9d5 140 PIRSF PIRSF001338 1 138 3.9E-56 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 PA257_3029 a7754bc4d3095c345b5d5e6e77b15f86 586 Gene3D G3DSA:3.40.50.150 354 585 1.2E-12 T 12-10-2018 PA257_3029 a7754bc4d3095c345b5d5e6e77b15f86 586 Pfam PF12146 Serine aminopeptidase, S33 32 267 2.3E-66 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 PA257_3029 a7754bc4d3095c345b5d5e6e77b15f86 586 Pfam PF12147 Putative methyltransferase 276 583 9.2E-156 T 12-10-2018 IPR022744 Methyltransferase domain, putative PA257_3029 a7754bc4d3095c345b5d5e6e77b15f86 586 SUPERFAMILY SSF53474 4 282 3.84E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3029 a7754bc4d3095c345b5d5e6e77b15f86 586 SUPERFAMILY SSF53335 401 575 1.53E-14 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3029 a7754bc4d3095c345b5d5e6e77b15f86 586 Gene3D G3DSA:3.40.50.1820 3 285 1.4E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1435 991493f9fc9b1f36f658ff70d21bfc19 667 Gene3D G3DSA:3.40.50.300 325 555 2.6E-49 T 12-10-2018 PA257_1435 991493f9fc9b1f36f658ff70d21bfc19 667 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 129 559 6.4E-104 T 12-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 PA257_1435 991493f9fc9b1f36f658ff70d21bfc19 667 SUPERFAMILY SSF52540 107 554 2.44E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0049 eac88d662b1264200b563951cb8459e8 73 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 73 2.0E-35 T 12-10-2018 IPR010595 Protein of unknown function DUF1161 PA257_0049 eac88d662b1264200b563951cb8459e8 73 Pfam PF06649 Protein of unknown function (DUF1161) 23 72 2.3E-24 T 12-10-2018 IPR010595 Protein of unknown function DUF1161 PA257_5797 1f5d3790f030f8fda024c35a2490c35d 258 Pfam PF00175 Oxidoreductase NAD-binding domain 117 233 2.7E-13 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_5797 1f5d3790f030f8fda024c35a2490c35d 258 Pfam PF00970 Oxidoreductase FAD-binding domain 23 94 1.2E-5 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PA257_5797 1f5d3790f030f8fda024c35a2490c35d 258 SUPERFAMILY SSF63380 7 104 2.15E-21 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_5797 1f5d3790f030f8fda024c35a2490c35d 258 Gene3D G3DSA:3.40.50.80 102 258 1.4E-42 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_5797 1f5d3790f030f8fda024c35a2490c35d 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 5.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5797 1f5d3790f030f8fda024c35a2490c35d 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 219 227 5.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5797 1f5d3790f030f8fda024c35a2490c35d 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 56 63 5.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PA257_5797 1f5d3790f030f8fda024c35a2490c35d 258 SUPERFAMILY SSF52343 109 258 1.7E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_5797 1f5d3790f030f8fda024c35a2490c35d 258 Gene3D G3DSA:2.40.30.10 1 100 3.3E-28 T 12-10-2018 PA257_5170 363a0f590a09725d748e4b7d278355de 658 SMART SM00849 122 344 5.1E-24 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_5170 363a0f590a09725d748e4b7d278355de 658 SUPERFAMILY SSF55718 531 652 1.01E-34 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PA257_5170 363a0f590a09725d748e4b7d278355de 658 Pfam PF14863 Alkyl sulfatase dimerisation 381 519 2.1E-56 T 12-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 PA257_5170 363a0f590a09725d748e4b7d278355de 658 Gene3D G3DSA:3.30.1050.10 521 658 3.5E-42 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PA257_5170 363a0f590a09725d748e4b7d278355de 658 Pfam PF14864 Alkyl sulfatase C-terminal 529 652 1.4E-32 T 12-10-2018 IPR029229 Alkyl sulfatase, C-terminal PA257_5170 363a0f590a09725d748e4b7d278355de 658 Gene3D G3DSA:1.25.40.880 380 520 8.0E-59 T 12-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily PA257_5170 363a0f590a09725d748e4b7d278355de 658 Pfam PF00753 Metallo-beta-lactamase superfamily 118 344 1.1E-47 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_5170 363a0f590a09725d748e4b7d278355de 658 SUPERFAMILY SSF56281 23 521 2.1E-154 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_5170 363a0f590a09725d748e4b7d278355de 658 Gene3D G3DSA:3.60.15.30 21 379 1.8E-165 T 12-10-2018 PA257_4409 e5b76e97919d74fd9c7539347d181cc2 466 Pfam PF13469 Sulfotransferase family 208 390 7.5E-14 T 12-10-2018 PA257_4409 e5b76e97919d74fd9c7539347d181cc2 466 Gene3D G3DSA:3.40.50.300 144 464 1.3E-19 T 12-10-2018 PA257_4409 e5b76e97919d74fd9c7539347d181cc2 466 SUPERFAMILY SSF52540 206 437 1.29E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3627 f9e99ab93d21043960c33116d01f83a5 237 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 206 4.3E-60 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D PA257_3627 f9e99ab93d21043960c33116d01f83a5 237 SMART SM00796 6 207 1.6E-84 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D PA257_3627 f9e99ab93d21043960c33116d01f83a5 237 SUPERFAMILY SSF160467 7 97 9.55E-13 T 12-10-2018 PA257_3627 f9e99ab93d21043960c33116d01f83a5 237 Gene3D G3DSA:3.30.1360.40 7 83 7.0E-10 T 12-10-2018 PA257_3627 f9e99ab93d21043960c33116d01f83a5 237 Gene3D G3DSA:2.40.100.10 93 230 7.7E-50 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_3627 f9e99ab93d21043960c33116d01f83a5 237 SUPERFAMILY SSF50891 94 223 7.59E-41 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_1875 e22205a348c2331b3d80aa45c4e00a97 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.3E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1875 e22205a348c2331b3d80aa45c4e00a97 308 Pfam PF03466 LysR substrate binding domain 91 292 2.2E-57 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1875 e22205a348c2331b3d80aa45c4e00a97 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1875 e22205a348c2331b3d80aa45c4e00a97 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1875 e22205a348c2331b3d80aa45c4e00a97 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1875 e22205a348c2331b3d80aa45c4e00a97 308 Gene3D G3DSA:1.10.10.10 1 86 2.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1875 e22205a348c2331b3d80aa45c4e00a97 308 SUPERFAMILY SSF53850 91 296 6.83E-51 T 12-10-2018 PA257_1875 e22205a348c2331b3d80aa45c4e00a97 308 Gene3D G3DSA:3.40.190.10 91 288 1.9E-49 T 12-10-2018 PA257_1875 e22205a348c2331b3d80aa45c4e00a97 308 SUPERFAMILY SSF46785 2 84 6.61E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1875 e22205a348c2331b3d80aa45c4e00a97 308 Gene3D G3DSA:3.40.190.10 164 265 1.9E-49 T 12-10-2018 PA257_2536 fd51944ab961d617cc53403225d75db3 109 SUPERFAMILY SSF82784 1 106 9.16E-34 T 12-10-2018 IPR036102 OsmC/Ohr superfamily PA257_2536 fd51944ab961d617cc53403225d75db3 109 Gene3D G3DSA:3.30.300.20 1 109 8.1E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_2536 fd51944ab961d617cc53403225d75db3 109 Pfam PF02566 OsmC-like protein 3 105 4.8E-19 T 12-10-2018 IPR003718 OsmC/Ohr family PA257_6197 bcbdd32b813b3d4191a0432682194972 219 Pfam PF00857 Isochorismatase family 11 202 2.0E-21 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_6197 bcbdd32b813b3d4191a0432682194972 219 Gene3D G3DSA:3.40.50.850 2 206 1.1E-35 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_6197 bcbdd32b813b3d4191a0432682194972 219 SUPERFAMILY SSF52499 8 201 2.09E-30 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_0130 73d037d2bb62afe266a84524970e1627 184 SUPERFAMILY SSF110111 54 174 1.15E-46 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0130 73d037d2bb62afe266a84524970e1627 184 PIRSF PIRSF005413 1 182 4.3E-64 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0130 73d037d2bb62afe266a84524970e1627 184 Gene3D G3DSA:2.60.370.10 52 183 6.3E-44 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0130 73d037d2bb62afe266a84524970e1627 184 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 171 1.6E-49 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_2436 de77fa6f36ccc0000ddb8b6ae43b00f5 317 Pfam PF01882 Protein of unknown function DUF58 213 258 6.0E-11 T 12-10-2018 IPR002881 Domain of unknown function DUF58 PA257_5919 a10a2ccd33de1b405cbcfc333623cf85 327 Pfam PF01032 FecCD transport family 2 324 1.7E-89 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PA257_5919 a10a2ccd33de1b405cbcfc333623cf85 327 SUPERFAMILY SSF81345 2 324 7.06E-81 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_5919 a10a2ccd33de1b405cbcfc333623cf85 327 Gene3D G3DSA:1.10.3470.10 1 327 1.5E-104 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_4441 27e5f8a004e571e0002301fad9ef4894 407 SUPERFAMILY SSF88946 5 90 1.37E-12 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_4441 27e5f8a004e571e0002301fad9ef4894 407 Gene3D G3DSA:1.10.10.10 83 164 1.6E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4441 27e5f8a004e571e0002301fad9ef4894 407 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 163 7.1E-13 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_4441 27e5f8a004e571e0002301fad9ef4894 407 Pfam PF08281 Sigma-70, region 4 109 160 3.0E-7 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_4441 27e5f8a004e571e0002301fad9ef4894 407 Gene3D G3DSA:1.10.1740.10 2 71 2.7E-7 T 12-10-2018 PA257_4441 27e5f8a004e571e0002301fad9ef4894 407 SUPERFAMILY SSF88659 99 162 5.98E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_4441 27e5f8a004e571e0002301fad9ef4894 407 Pfam PF04542 Sigma-70 region 2 8 75 6.2E-10 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3168 e7af3936760388d0b0aa812676c77d24 172 Gene3D G3DSA:1.20.5.170 4 83 1.1E-7 T 12-10-2018 PA257_3168 e7af3936760388d0b0aa812676c77d24 172 Pfam PF07352 Bacteriophage Mu Gam like protein 19 166 2.3E-40 T 12-10-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 PA257_3168 e7af3936760388d0b0aa812676c77d24 172 SUPERFAMILY SSF161266 15 166 1.44E-47 T 12-10-2018 PA257_0523 e7af3936760388d0b0aa812676c77d24 172 Gene3D G3DSA:1.20.5.170 4 83 1.1E-7 T 12-10-2018 PA257_0523 e7af3936760388d0b0aa812676c77d24 172 Pfam PF07352 Bacteriophage Mu Gam like protein 19 166 2.3E-40 T 12-10-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 PA257_0523 e7af3936760388d0b0aa812676c77d24 172 SUPERFAMILY SSF161266 15 166 1.44E-47 T 12-10-2018 PA257_3015 d74765b90a0911e76f77287440c0c9b9 396 PIRSF PIRSF000429 1 396 2.1E-112 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_3015 d74765b90a0911e76f77287440c0c9b9 396 Gene3D G3DSA:3.40.47.10 9 278 2.1E-138 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3015 d74765b90a0911e76f77287440c0c9b9 396 Gene3D G3DSA:3.40.47.10 129 391 2.1E-138 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3015 d74765b90a0911e76f77287440c0c9b9 396 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 PA257_3015 d74765b90a0911e76f77287440c0c9b9 396 Pfam PF02803 Thiolase, C-terminal domain 273 394 5.5E-41 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PA257_3015 d74765b90a0911e76f77287440c0c9b9 396 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PA257_3015 d74765b90a0911e76f77287440c0c9b9 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 393 3.2E-124 T 12-10-2018 IPR002155 Thiolase GO:0016747 PA257_3015 d74765b90a0911e76f77287440c0c9b9 396 SUPERFAMILY SSF53901 7 272 1.56E-77 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3015 d74765b90a0911e76f77287440c0c9b9 396 Pfam PF00108 Thiolase, N-terminal domain 7 263 2.4E-86 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PA257_3015 d74765b90a0911e76f77287440c0c9b9 396 SUPERFAMILY SSF53901 274 394 1.69E-38 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 543 4.3E-22 T 12-10-2018 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 547 559 4.3E-22 T 12-10-2018 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 164 178 4.3E-22 T 12-10-2018 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 471 481 4.3E-22 T 12-10-2018 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 4.3E-22 T 12-10-2018 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 Gene3D G3DSA:3.40.50.1000 297 574 2.7E-63 T 12-10-2018 IPR023214 HAD superfamily PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 Gene3D G3DSA:2.70.150.20 117 222 2.1E-25 T 12-10-2018 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 ProSitePatterns PS01229 Hypothetical cof family signature 2. 524 546 - T 12-10-2018 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 317 323 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 SUPERFAMILY SSF81665 47 309 3.92E-10 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 Gene3D G3DSA:3.40.1110.10 326 456 2.7E-63 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 Pfam PF00122 E1-E2 ATPase 121 293 1.0E-32 T 12-10-2018 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 SUPERFAMILY SSF81653 123 217 3.66E-20 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 Pfam PF00702 haloacid dehalogenase-like hydrolase 313 538 5.5E-32 T 12-10-2018 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 28 685 6.2E-292 T 12-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 85 353 2.2E-30 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 385 606 9.7E-42 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 SUPERFAMILY SSF56784 303 568 2.68E-38 T 12-10-2018 IPR036412 HAD-like superfamily PA257_4148 1ac5137f4ab9fcbe01b1316d5a894799 690 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 24 688 40.196 T 12-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 PA257_4741 e190db32bf9778a9dfa861120c4b6437 237 Pfam PF03963 Flagellar hook capping protein - N-terminal region 24 89 7.7E-25 T 12-10-2018 IPR005648 Flagellar hook capping protein PA257_4741 e190db32bf9778a9dfa861120c4b6437 237 Gene3D G3DSA:2.60.40.4070 114 200 3.5E-45 T 12-10-2018 PA257_4741 e190db32bf9778a9dfa861120c4b6437 237 Pfam PF13860 FlgD Ig-like domain 119 189 3.9E-22 T 12-10-2018 IPR025965 FlgD Ig-like domain PA257_4741 e190db32bf9778a9dfa861120c4b6437 237 Pfam PF13861 FlgD Tudor-like domain 97 233 1.3E-17 T 12-10-2018 IPR025963 FlgD Tudor-like domain PA257_4741 e190db32bf9778a9dfa861120c4b6437 237 Gene3D G3DSA:2.30.30.910 102 232 3.5E-45 T 12-10-2018 PA257_6092 76aa5c71a7171d37f21ef129a389e072 324 Gene3D G3DSA:3.90.550.10 2 220 1.4E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6092 76aa5c71a7171d37f21ef129a389e072 324 Pfam PF00535 Glycosyl transferase family 2 18 179 3.8E-27 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_6092 76aa5c71a7171d37f21ef129a389e072 324 SUPERFAMILY SSF53448 17 275 6.94E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_0115 63b0aae629f9868c9cbff13cf129411c 460 Gene3D G3DSA:2.60.200.60 75 161 7.7E-17 T 12-10-2018 PA257_0115 63b0aae629f9868c9cbff13cf129411c 460 Pfam PF05488 PAAR motif 80 151 1.8E-12 T 12-10-2018 IPR008727 PAAR motif PA257_4617 170c958295e3638b38554f8952352753 165 Pfam PF10263 SprT-like family 10 111 1.2E-18 T 12-10-2018 IPR006640 SprT-like PA257_4617 170c958295e3638b38554f8952352753 165 Pfam PF17283 SprT-like zinc ribbon domain 118 159 4.3E-10 T 12-10-2018 IPR035240 SprT-like, zinc ribbon domain PA257_4617 170c958295e3638b38554f8952352753 165 SMART SM00731 7 159 1.1E-60 T 12-10-2018 IPR006640 SprT-like PA257_3305 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 Gene3D G3DSA:1.10.3720.10 2 269 3.9E-51 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3305 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 SUPERFAMILY SSF161098 7 277 3.08E-63 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3305 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 270 5.5E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_2455 db5741c715a7604c4dcaf1cc3b99e027 227 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2455 db5741c715a7604c4dcaf1cc3b99e027 227 SUPERFAMILY SSF52540 5 223 3.63E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2455 db5741c715a7604c4dcaf1cc3b99e027 227 SMART SM00382 34 220 1.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2455 db5741c715a7604c4dcaf1cc3b99e027 227 Gene3D G3DSA:3.40.50.300 3 227 8.3E-70 T 12-10-2018 PA257_2455 db5741c715a7604c4dcaf1cc3b99e027 227 Pfam PF00005 ABC transporter 25 171 9.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_5687 189cd5095a13c9f52cd8a4ceec99b07b 248 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 248 4.6E-104 T 12-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type PA257_5687 189cd5095a13c9f52cd8a4ceec99b07b 248 Pfam PF14348 Domain of unknown function (DUF4400) 51 245 1.4E-70 T 12-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type PA257_0789 c64bfd1000b0edda0d985dd26b570f5b 264 Gene3D G3DSA:3.60.90.10 98 186 2.6E-7 T 12-10-2018 PA257_0789 c64bfd1000b0edda0d985dd26b570f5b 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 167.863 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 PA257_0789 c64bfd1000b0edda0d985dd26b570f5b 264 PIRSF PIRSF001356 1 264 6.2E-150 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 PA257_0789 c64bfd1000b0edda0d985dd26b570f5b 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 4 262 3.1E-147 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 PA257_0789 c64bfd1000b0edda0d985dd26b570f5b 264 SUPERFAMILY SSF56276 44 174 4.71E-25 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 PA257_0789 c64bfd1000b0edda0d985dd26b570f5b 264 Pfam PF02675 S-adenosylmethionine decarboxylase 36 170 1.1E-31 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 PA257_1615 b69dd31940ab3b710e988f88518cb152 130 SUPERFAMILY SSF51306 2 126 4.01E-24 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_1615 b69dd31940ab3b710e988f88518cb152 130 Pfam PF00717 Peptidase S24-like 41 112 1.2E-12 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_1615 b69dd31940ab3b710e988f88518cb152 130 Gene3D G3DSA:2.10.109.10 1 126 2.7E-37 T 12-10-2018 PA257_5639 eb36b17bff7e74c891cc666323724ff1 68 Pfam PF11358 Protein of unknown function (DUF3158) 1 60 1.1E-23 T 12-10-2018 IPR021502 Protein of unknown function DUF3158 PA257_6296 806938d5a64d72c7530c73628df9e804 244 SUPERFAMILY SSF56112 35 181 1.64E-18 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_6296 806938d5a64d72c7530c73628df9e804 244 Gene3D G3DSA:1.10.510.10 36 177 8.2E-7 T 12-10-2018 PA257_6296 806938d5a64d72c7530c73628df9e804 244 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 154 166 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PA257_6296 806938d5a64d72c7530c73628df9e804 244 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 42 211 1.4E-17 T 12-10-2018 PA257_2027 04bd1ed55d160f1e843cd694f6185f1a 248 Gene3D G3DSA:3.40.190.10 108 203 6.4E-20 T 12-10-2018 PA257_2027 04bd1ed55d160f1e843cd694f6185f1a 248 Gene3D G3DSA:3.40.190.10 43 239 6.4E-20 T 12-10-2018 PA257_2027 04bd1ed55d160f1e843cd694f6185f1a 248 SUPERFAMILY SSF53850 19 240 2.08E-30 T 12-10-2018 PA257_2027 04bd1ed55d160f1e843cd694f6185f1a 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 239 1.6E-15 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_3080 c39e831d0e7489f68015dbc27811776c 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 371 3.2E-80 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_3080 c39e831d0e7489f68015dbc27811776c 414 Gene3D G3DSA:2.40.30.170 51 300 4.9E-97 T 12-10-2018 PA257_3080 c39e831d0e7489f68015dbc27811776c 414 Gene3D G3DSA:2.40.420.20 301 369 4.9E-97 T 12-10-2018 PA257_3080 c39e831d0e7489f68015dbc27811776c 414 Gene3D G3DSA:1.10.287.470 98 171 4.9E-97 T 12-10-2018 PA257_3080 c39e831d0e7489f68015dbc27811776c 414 Gene3D G3DSA:2.40.50.100 63 206 4.9E-97 T 12-10-2018 PA257_3080 c39e831d0e7489f68015dbc27811776c 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 290 1.7E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_3080 c39e831d0e7489f68015dbc27811776c 414 SUPERFAMILY SSF111369 53 294 1.15E-70 T 12-10-2018 PA257_1476 d0acd50c847c629539deb0382609f287 252 PIRSF PIRSF000386 5 250 1.7E-97 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PA257_1476 d0acd50c847c629539deb0382609f287 252 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 27 225 1.7E-64 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PA257_1476 d0acd50c847c629539deb0382609f287 252 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 5 234 7.9E-98 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PA257_1476 d0acd50c847c629539deb0382609f287 252 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 252 114.841 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PA257_1476 d0acd50c847c629539deb0382609f287 252 SUPERFAMILY SSF75217 5 249 3.4E-98 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases PA257_1476 d0acd50c847c629539deb0382609f287 252 Gene3D G3DSA:1.10.1270.20 171 252 1.5E-33 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PA257_1476 d0acd50c847c629539deb0382609f287 252 Gene3D G3DSA:3.40.1280.10 3 170 4.6E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PA257_5190 06b772558cb9b2de8a1446060c42e889 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 2.7E-62 T 12-10-2018 IPR021364 Protein of unknown function DUF2857 PA257_0821 289c47e462a79e6ce33182b3cb634261 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.661 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PA257_0821 289c47e462a79e6ce33182b3cb634261 143 Gene3D G3DSA:1.10.10.2720 73 143 1.0E-25 T 12-10-2018 PA257_0821 289c47e462a79e6ce33182b3cb634261 143 SUPERFAMILY SSF46906 68 141 9.68E-24 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily PA257_0821 289c47e462a79e6ce33182b3cb634261 143 SMART SM00649 9 141 5.8E-83 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PA257_0821 289c47e462a79e6ce33182b3cb634261 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.6E-23 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PA257_0821 289c47e462a79e6ce33182b3cb634261 143 SUPERFAMILY SSF54747 3 72 7.46E-30 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily PA257_0821 289c47e462a79e6ce33182b3cb634261 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.6E-64 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0821 289c47e462a79e6ce33182b3cb634261 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 5.0E-16 T 12-10-2018 PA257_0821 289c47e462a79e6ce33182b3cb634261 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.3E-29 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal PA257_0821 289c47e462a79e6ce33182b3cb634261 143 Gene3D G3DSA:3.30.1550.10 2 72 4.0E-34 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily PA257_0821 289c47e462a79e6ce33182b3cb634261 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_3434 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 290 308 1.8E-6 T 12-10-2018 PA257_3434 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 266 276 1.8E-6 T 12-10-2018 PA257_3434 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 240 255 1.8E-6 T 12-10-2018 PA257_3434 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 170 181 1.8E-6 T 12-10-2018 PA257_3462 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 290 308 1.8E-6 T 12-10-2018 PA257_3462 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 266 276 1.8E-6 T 12-10-2018 PA257_3462 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 240 255 1.8E-6 T 12-10-2018 PA257_3462 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 170 181 1.8E-6 T 12-10-2018 PA257_3453 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 290 308 1.8E-6 T 12-10-2018 PA257_3453 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 266 276 1.8E-6 T 12-10-2018 PA257_3453 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 240 255 1.8E-6 T 12-10-2018 PA257_3453 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 170 181 1.8E-6 T 12-10-2018 PA257_3444 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 290 308 1.8E-6 T 12-10-2018 PA257_3444 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 266 276 1.8E-6 T 12-10-2018 PA257_3444 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 240 255 1.8E-6 T 12-10-2018 PA257_3444 5be12de71d3b7290a6d8720e487f8f9b 452 PRINTS PR01228 Eggshell protein signature 170 181 1.8E-6 T 12-10-2018 PA257_3840 f8d829f1c5798441a6bf2773339d882d 546 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 104 240 5.0E-6 T 12-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 PA257_3840 f8d829f1c5798441a6bf2773339d882d 546 Gene3D G3DSA:3.40.50.1820 101 502 2.8E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3840 f8d829f1c5798441a6bf2773339d882d 546 SUPERFAMILY SSF53474 100 495 1.33E-11 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0225 947f5aad2cd3bd2b2cabd967fb434c82 478 Gene3D G3DSA:3.40.50.1220 300 478 1.8E-83 T 12-10-2018 PA257_0225 947f5aad2cd3bd2b2cabd967fb434c82 478 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 475 3.6E-191 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 PA257_0225 947f5aad2cd3bd2b2cabd967fb434c82 478 PIRSF PIRSF000204 1 478 2.3E-217 T 12-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PA257_0225 947f5aad2cd3bd2b2cabd967fb434c82 478 SUPERFAMILY SSF52467 306 478 6.27E-75 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_1923 3e807a411ff22d6883e4a5081a1ddbef 156 Pfam PF05130 FlgN protein 2 145 2.7E-31 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PA257_1923 3e807a411ff22d6883e4a5081a1ddbef 156 Gene3D G3DSA:1.20.58.300 1 130 6.7E-46 T 12-10-2018 PA257_1923 3e807a411ff22d6883e4a5081a1ddbef 156 SUPERFAMILY SSF140566 6 130 3.01E-29 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 PA257_5583 b7a9348d9ae0f9c0138e4609de2155d8 299 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 69 222 3.9E-48 T 12-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 PA257_5583 b7a9348d9ae0f9c0138e4609de2155d8 299 SUPERFAMILY SSF51197 98 239 2.25E-18 T 12-10-2018 PA257_5583 b7a9348d9ae0f9c0138e4609de2155d8 299 Gene3D G3DSA:2.60.120.330 43 227 6.4E-43 T 12-10-2018 IPR027443 Isopenicillin N synthase-like PA257_0024 93bb71e2b9d6f77d195b503c0d55292d 105 Pfam PF13428 Tetratricopeptide repeat 21 59 2.3E-5 T 12-10-2018 PA257_0024 93bb71e2b9d6f77d195b503c0d55292d 105 SMART SM00028 17 50 0.53 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_0024 93bb71e2b9d6f77d195b503c0d55292d 105 SMART SM00028 51 84 17.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_0024 93bb71e2b9d6f77d195b503c0d55292d 105 Gene3D G3DSA:1.25.40.10 1 105 1.7E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_0024 93bb71e2b9d6f77d195b503c0d55292d 105 SUPERFAMILY SSF48452 5 84 6.75E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_0882 cfaed71ff2a1157c72e76f5442f130fd 207 PIRSF PIRSF001111 2 207 6.9E-94 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_0882 cfaed71ff2a1157c72e76f5442f130fd 207 SUPERFAMILY SSF52499 3 207 5.63E-62 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_0882 cfaed71ff2a1157c72e76f5442f130fd 207 Gene3D G3DSA:3.40.50.850 1 207 1.6E-87 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_0882 cfaed71ff2a1157c72e76f5442f130fd 207 Pfam PF00857 Isochorismatase family 33 204 3.5E-35 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_0882 cfaed71ff2a1157c72e76f5442f130fd 207 PRINTS PR01398 Isochorismatase signature 167 185 3.8E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_0882 cfaed71ff2a1157c72e76f5442f130fd 207 PRINTS PR01398 Isochorismatase signature 3 15 3.8E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_0882 cfaed71ff2a1157c72e76f5442f130fd 207 PRINTS PR01398 Isochorismatase signature 111 133 3.8E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_0882 cfaed71ff2a1157c72e76f5442f130fd 207 PRINTS PR01398 Isochorismatase signature 79 98 3.8E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_0882 cfaed71ff2a1157c72e76f5442f130fd 207 PRINTS PR01398 Isochorismatase signature 185 202 3.8E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_0882 cfaed71ff2a1157c72e76f5442f130fd 207 PRINTS PR01398 Isochorismatase signature 62 79 3.8E-57 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 PA257_3796 d2df9525b77b0b5cf7d9c85424aee32a 279 Gene3D G3DSA:3.40.50.2300 105 241 3.9E-92 T 12-10-2018 PA257_3796 d2df9525b77b0b5cf7d9c85424aee32a 279 Gene3D G3DSA:3.40.50.2300 2 255 3.9E-92 T 12-10-2018 PA257_3796 d2df9525b77b0b5cf7d9c85424aee32a 279 Pfam PF13407 Periplasmic binding protein domain 1 259 3.7E-54 T 12-10-2018 IPR025997 Periplasmic binding protein PA257_3796 d2df9525b77b0b5cf7d9c85424aee32a 279 SUPERFAMILY SSF53822 3 278 8.48E-74 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_4598 0c29717ffdcfcc309a70a090c128b858 499 Gene3D G3DSA:3.50.50.60 158 250 5.6E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4598 0c29717ffdcfcc309a70a090c128b858 499 SUPERFAMILY SSF51905 4 386 2.89E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4598 0c29717ffdcfcc309a70a090c128b858 499 Gene3D G3DSA:3.50.50.60 2 157 1.1E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4598 0c29717ffdcfcc309a70a090c128b858 499 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 57 4.0E-6 T 12-10-2018 PA257_4598 0c29717ffdcfcc309a70a090c128b858 499 Gene3D G3DSA:3.50.50.60 313 435 2.0E-6 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4598 0c29717ffdcfcc309a70a090c128b858 499 Pfam PF00743 Flavin-binding monooxygenase-like 82 218 1.0E-8 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 PA257_5318 17767173ee03ce19c99d6547d77228ca 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 719 733 1.2E-26 T 12-10-2018 IPR001775 GspD/PilQ family PA257_5318 17767173ee03ce19c99d6547d77228ca 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 696 714 1.2E-26 T 12-10-2018 IPR001775 GspD/PilQ family PA257_5318 17767173ee03ce19c99d6547d77228ca 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 492 1.2E-26 T 12-10-2018 IPR001775 GspD/PilQ family PA257_5318 17767173ee03ce19c99d6547d77228ca 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 597 607 1.2E-26 T 12-10-2018 IPR001775 GspD/PilQ family PA257_5318 17767173ee03ce19c99d6547d77228ca 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 562 586 1.2E-26 T 12-10-2018 IPR001775 GspD/PilQ family PA257_5318 17767173ee03ce19c99d6547d77228ca 803 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 104 741 1.5E-198 T 12-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 PA257_5318 17767173ee03ce19c99d6547d77228ca 803 Gene3D G3DSA:3.30.1370.120 95 256 3.5E-50 T 12-10-2018 IPR038591 NolW-like superfamily PA257_5318 17767173ee03ce19c99d6547d77228ca 803 Pfam PF00263 Bacterial type II and III secretion system protein 566 732 5.0E-49 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 PA257_5318 17767173ee03ce19c99d6547d77228ca 803 Pfam PF03958 Bacterial type II/III secretion system short domain 263 332 4.5E-12 T 12-10-2018 IPR005644 NolW-like PA257_5318 17767173ee03ce19c99d6547d77228ca 803 Pfam PF03958 Bacterial type II/III secretion system short domain 199 259 1.9E-10 T 12-10-2018 IPR005644 NolW-like PA257_5318 17767173ee03ce19c99d6547d77228ca 803 Pfam PF03958 Bacterial type II/III secretion system short domain 339 482 3.0E-11 T 12-10-2018 IPR005644 NolW-like PA257_5318 17767173ee03ce19c99d6547d77228ca 803 Gene3D G3DSA:3.30.1370.120 258 331 9.5E-12 T 12-10-2018 IPR038591 NolW-like superfamily PA257_5848 d40a0df3071453aa4520b1ef807b6275 265 SUPERFAMILY SSF53681 111 257 1.31E-37 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PA257_5848 d40a0df3071453aa4520b1ef807b6275 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 8 246 1.8E-65 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PA257_5848 d40a0df3071453aa4520b1ef807b6275 265 Hamap MF_00258 Glutamate racemase [murI]. 6 257 37.126 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PA257_5848 d40a0df3071453aa4520b1ef807b6275 265 Gene3D G3DSA:3.40.50.1860 8 249 8.9E-86 T 12-10-2018 PA257_5848 d40a0df3071453aa4520b1ef807b6275 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 217 4.3E-37 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PA257_5848 d40a0df3071453aa4520b1ef807b6275 265 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 72 80 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PA257_5848 d40a0df3071453aa4520b1ef807b6275 265 Gene3D G3DSA:3.40.50.1860 98 209 8.9E-86 T 12-10-2018 PA257_5848 d40a0df3071453aa4520b1ef807b6275 265 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 182 192 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PA257_5848 d40a0df3071453aa4520b1ef807b6275 265 SUPERFAMILY SSF53681 8 109 3.6E-32 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PA257_2379 f00456d8d4398bc324ac732b5b1260ed 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 34 93 5.3E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2379 f00456d8d4398bc324ac732b5b1260ed 321 SUPERFAMILY SSF53850 122 320 3.44E-25 T 12-10-2018 PA257_2379 f00456d8d4398bc324ac732b5b1260ed 321 SUPERFAMILY SSF46785 30 111 8.72E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2379 f00456d8d4398bc324ac732b5b1260ed 321 Gene3D G3DSA:3.40.190.10 129 315 9.9E-39 T 12-10-2018 PA257_2379 f00456d8d4398bc324ac732b5b1260ed 321 Pfam PF03466 LysR substrate binding domain 122 319 1.3E-19 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2379 f00456d8d4398bc324ac732b5b1260ed 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 70 81 5.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2379 f00456d8d4398bc324ac732b5b1260ed 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 70 5.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2379 f00456d8d4398bc324ac732b5b1260ed 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 5.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2379 f00456d8d4398bc324ac732b5b1260ed 321 Gene3D G3DSA:3.40.190.10 189 289 9.9E-39 T 12-10-2018 PA257_2379 f00456d8d4398bc324ac732b5b1260ed 321 Gene3D G3DSA:1.10.10.10 32 118 1.0E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4411 e479e517d6ca4d89340964790b2d4c6c 527 SUPERFAMILY SSF53756 175 525 5.23E-58 T 12-10-2018 PA257_4411 e479e517d6ca4d89340964790b2d4c6c 527 Gene3D G3DSA:3.40.50.2000 338 514 2.9E-41 T 12-10-2018 PA257_4411 e479e517d6ca4d89340964790b2d4c6c 527 Gene3D G3DSA:3.40.50.2000 178 522 2.9E-41 T 12-10-2018 PA257_4411 e479e517d6ca4d89340964790b2d4c6c 527 Pfam PF00534 Glycosyl transferases group 1 351 507 1.0E-27 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_5461 ec864d2cddacf415b9ab2ccb09b9df15 159 Gene3D G3DSA:3.30.70.990 9 92 1.2E-23 T 12-10-2018 IPR035570 UPF0234, N-terminal PA257_5461 ec864d2cddacf415b9ab2ccb09b9df15 159 Gene3D G3DSA:3.30.70.860 93 159 1.2E-30 T 12-10-2018 IPR035571 UPF0234-like, C-terminal PA257_5461 ec864d2cddacf415b9ab2ccb09b9df15 159 Pfam PF04461 Protein of unknown function (DUF520) 2 158 6.1E-62 T 12-10-2018 IPR007551 Protein of unknown function DUF520 PA257_5461 ec864d2cddacf415b9ab2ccb09b9df15 159 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 159 29.102 T 12-10-2018 IPR007551 Protein of unknown function DUF520 PA257_5461 ec864d2cddacf415b9ab2ccb09b9df15 159 SUPERFAMILY SSF89963 2 85 2.43E-26 T 12-10-2018 IPR036183 YajQ-like superfamily PA257_5461 ec864d2cddacf415b9ab2ccb09b9df15 159 SUPERFAMILY SSF89963 87 159 2.88E-29 T 12-10-2018 IPR036183 YajQ-like superfamily PA257_6643 68b45b96820f77202bbf69e4653f95fb 141 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 7.0E-35 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 PA257_6643 68b45b96820f77202bbf69e4653f95fb 141 SUPERFAMILY SSF111038 1 139 8.5E-45 T 12-10-2018 IPR035917 YjbQ-like superfamily PA257_6643 68b45b96820f77202bbf69e4653f95fb 141 Gene3D G3DSA:2.60.120.460 2 139 1.5E-37 T 12-10-2018 IPR035917 YjbQ-like superfamily PA257_6643 68b45b96820f77202bbf69e4653f95fb 141 PIRSF PIRSF004681 1 139 8.5E-43 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 PA257_6643 68b45b96820f77202bbf69e4653f95fb 141 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 9 139 1.5E-38 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 PA257_2984 5f32b09bce00c00ed538df8d5006969d 288 Pfam PF03301 Tryptophan 2,3-dioxygenase 21 207 1.0E-41 T 12-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 PA257_2984 5f32b09bce00c00ed538df8d5006969d 288 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 25 288 1.6E-128 T 12-10-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 PA257_2984 5f32b09bce00c00ed538df8d5006969d 288 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 25 288 40.411 T 12-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 PA257_2984 5f32b09bce00c00ed538df8d5006969d 288 Gene3D G3DSA:1.20.58.480 29 288 5.0E-99 T 12-10-2018 PA257_2984 5f32b09bce00c00ed538df8d5006969d 288 SUPERFAMILY SSF140959 31 287 3.14E-100 T 12-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 PA257_6719 27586bd646c37c7307d4786e0b8af06e 239 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 5.1E-10 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_6719 27586bd646c37c7307d4786e0b8af06e 239 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site PA257_6719 27586bd646c37c7307d4786e0b8af06e 239 Gene3D G3DSA:3.30.230.70 11 239 1.1E-65 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_6719 27586bd646c37c7307d4786e0b8af06e 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 237 6.3E-115 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 PA257_6719 27586bd646c37c7307d4786e0b8af06e 239 SUPERFAMILY SSF54211 3 182 6.07E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_6719 27586bd646c37c7307d4786e0b8af06e 239 Hamap MF_00564 Ribonuclease PH [rph]. 12 238 45.21 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 PA257_6719 27586bd646c37c7307d4786e0b8af06e 239 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 3.6E-27 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_6719 27586bd646c37c7307d4786e0b8af06e 239 SUPERFAMILY SSF55666 153 238 7.98E-27 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PA257_5969 69531ab9627fcc8148a496ee600c1943 207 Pfam PF01728 FtsJ-like methyltransferase 28 204 2.0E-56 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PA257_5969 69531ab9627fcc8148a496ee600c1943 207 PIRSF PIRSF005461 1 207 1.6E-80 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 PA257_5969 69531ab9627fcc8148a496ee600c1943 207 SUPERFAMILY SSF53335 27 205 6.1E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5969 69531ab9627fcc8148a496ee600c1943 207 Gene3D G3DSA:3.40.50.150 27 207 4.6E-61 T 12-10-2018 PA257_5969 69531ab9627fcc8148a496ee600c1943 207 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 30.614 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 PA257_4026 5ad5b85f83d629be6dbc933f6c199194 229 SUPERFAMILY SSF52096 3 224 2.39E-45 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_4026 5ad5b85f83d629be6dbc933f6c199194 229 Gene3D G3DSA:3.90.226.10 1 229 1.1E-72 T 12-10-2018 PA257_4026 5ad5b85f83d629be6dbc933f6c199194 229 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 226 2.1E-32 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_2793 cfdc7957b16c9b7eeda00a9bcc83f431 260 Hamap MF_01974 Methionine aminopeptidase [map]. 1 248 39.027 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_2793 cfdc7957b16c9b7eeda00a9bcc83f431 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.0E-94 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_2793 cfdc7957b16c9b7eeda00a9bcc83f431 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.5E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_2793 cfdc7957b16c9b7eeda00a9bcc83f431 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.5E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_2793 cfdc7957b16c9b7eeda00a9bcc83f431 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.5E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_2793 cfdc7957b16c9b7eeda00a9bcc83f431 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.5E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_2793 cfdc7957b16c9b7eeda00a9bcc83f431 260 Pfam PF00557 Metallopeptidase family M24 10 239 1.7E-51 T 12-10-2018 IPR000994 Peptidase M24 PA257_2793 cfdc7957b16c9b7eeda00a9bcc83f431 260 SUPERFAMILY SSF55920 1 252 6.02E-88 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like PA257_2793 cfdc7957b16c9b7eeda00a9bcc83f431 260 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_2793 cfdc7957b16c9b7eeda00a9bcc83f431 260 Gene3D G3DSA:3.90.230.10 1 256 1.3E-103 T 12-10-2018 PA257_6698 c3988557fcbad409a3b4d72cd3f2748d 120 Gene3D G3DSA:2.60.120.10 3 115 7.3E-28 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_6698 c3988557fcbad409a3b4d72cd3f2748d 120 Pfam PF05899 Protein of unknown function (DUF861) 41 113 3.1E-23 T 12-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PA257_6698 c3988557fcbad409a3b4d72cd3f2748d 120 SUPERFAMILY SSF51182 16 116 1.11E-20 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_6067 237f57c3b34e10529ac058b9980fe45e 125 Gene3D G3DSA:3.40.1260.10 2 125 1.5E-27 T 12-10-2018 IPR027396 DsrEFH-like PA257_6067 237f57c3b34e10529ac058b9980fe45e 125 SUPERFAMILY SSF75169 10 125 5.38E-16 T 12-10-2018 IPR027396 DsrEFH-like PA257_6067 237f57c3b34e10529ac058b9980fe45e 125 Pfam PF02635 DsrE/DsrF-like family 9 124 1.3E-15 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein PA257_4705 dff3b533c94788189faabe33c0fcfad1 259 Gene3D G3DSA:1.10.10.60 157 258 1.4E-19 T 12-10-2018 PA257_4705 dff3b533c94788189faabe33c0fcfad1 259 SUPERFAMILY SSF46689 210 255 1.51E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4705 dff3b533c94788189faabe33c0fcfad1 259 SUPERFAMILY SSF51182 16 182 4.36E-13 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4705 dff3b533c94788189faabe33c0fcfad1 259 Pfam PF02311 AraC-like ligand binding domain 19 143 5.5E-18 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_4705 dff3b533c94788189faabe33c0fcfad1 259 Pfam PF12833 Helix-turn-helix domain 181 256 1.3E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4705 dff3b533c94788189faabe33c0fcfad1 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 251 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_4705 dff3b533c94788189faabe33c0fcfad1 259 Gene3D G3DSA:2.60.120.10 16 112 4.3E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4705 dff3b533c94788189faabe33c0fcfad1 259 SMART SM00342 173 255 1.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3566 cc0c03ead76572cd8031d9bd8efddae8 716 SMART SM00642 190 578 4.4E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3566 cc0c03ead76572cd8031d9bd8efddae8 716 SUPERFAMILY SSF51445 149 587 2.65E-131 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_3566 cc0c03ead76572cd8031d9bd8efddae8 716 Gene3D G3DSA:2.60.40.10 6 150 6.2E-53 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3566 cc0c03ead76572cd8031d9bd8efddae8 716 Pfam PF00128 Alpha amylase, catalytic domain 200 288 2.2E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3566 cc0c03ead76572cd8031d9bd8efddae8 716 Gene3D G3DSA:2.60.40.1180 598 705 2.2E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta PA257_3566 cc0c03ead76572cd8031d9bd8efddae8 716 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 15 706 0.0 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 PA257_3566 cc0c03ead76572cd8031d9bd8efddae8 716 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 107 5.3E-20 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 PA257_3566 cc0c03ead76572cd8031d9bd8efddae8 716 SUPERFAMILY SSF51011 598 706 1.87E-27 T 12-10-2018 PA257_3566 cc0c03ead76572cd8031d9bd8efddae8 716 SUPERFAMILY SSF81296 15 158 1.4E-49 T 12-10-2018 IPR014756 Immunoglobulin E-set PA257_3566 cc0c03ead76572cd8031d9bd8efddae8 716 Gene3D G3DSA:3.20.20.80 151 592 7.6E-172 T 12-10-2018 PA257_5806 c2612aef5578aa98679eb9d6e5ef1c33 403 Gene3D G3DSA:1.20.1250.20 8 391 8.4E-31 T 12-10-2018 PA257_5806 c2612aef5578aa98679eb9d6e5ef1c33 403 SUPERFAMILY SSF103473 5 399 1.28E-37 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_5806 c2612aef5578aa98679eb9d6e5ef1c33 403 Pfam PF05977 Transmembrane secretion effector 9 389 2.2E-35 T 12-10-2018 IPR010290 Transmembrane secretion effector PA257_5374 c7d8dd913089596b803996baf4848ad1 371 Pfam PF00534 Glycosyl transferases group 1 188 331 3.2E-20 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_5374 c7d8dd913089596b803996baf4848ad1 371 Gene3D G3DSA:3.40.50.2000 7 346 8.9E-49 T 12-10-2018 PA257_5374 c7d8dd913089596b803996baf4848ad1 371 Pfam PF13439 Glycosyltransferase Family 4 15 175 2.2E-21 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PA257_5374 c7d8dd913089596b803996baf4848ad1 371 SUPERFAMILY SSF53756 6 361 6.57E-64 T 12-10-2018 PA257_5374 c7d8dd913089596b803996baf4848ad1 371 Gene3D G3DSA:3.40.50.2000 174 345 8.9E-49 T 12-10-2018 PA257_3540 43fbf44739a73b2a0ea735405856b06f 184 SUPERFAMILY SSF52096 3 170 1.74E-29 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_3540 43fbf44739a73b2a0ea735405856b06f 184 Gene3D G3DSA:3.90.226.10 1 173 3.5E-30 T 12-10-2018 PA257_3540 43fbf44739a73b2a0ea735405856b06f 184 Pfam PF00574 Clp protease 2 168 7.9E-15 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PA257_2624 4f3f0d73c9170720a0b125dbec80c6e5 280 Gene3D G3DSA:3.40.50.620 5 187 4.6E-23 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2624 4f3f0d73c9170720a0b125dbec80c6e5 280 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 12 171 4.0E-5 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 PA257_2624 4f3f0d73c9170720a0b125dbec80c6e5 280 SUPERFAMILY SSF52402 9 183 4.19E-14 T 12-10-2018 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 PRINTS PR00143 Citrate synthase signature 328 342 7.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 PRINTS PR00143 Citrate synthase signature 198 226 7.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 PRINTS PR00143 Citrate synthase signature 251 271 7.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 PRINTS PR00143 Citrate synthase signature 176 191 7.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 PRINTS PR00143 Citrate synthase signature 308 324 7.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 PRINTS PR00143 Citrate synthase signature 126 139 7.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 Gene3D G3DSA:1.10.230.10 224 322 2.7E-123 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 PIRSF PIRSF001369 3 375 2.0E-119 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 Gene3D G3DSA:1.10.580.10 32 355 2.7E-123 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 SUPERFAMILY SSF48256 10 375 2.62E-128 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 8.2E-120 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 PA257_5111 e978e4b12021ae6a14e8fcf20dea70bc 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 2.1E-155 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 PA257_6748 3b61ef0ae834381c5006c92e8233f6e5 229 SMART SM00862 151 225 6.4E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_6748 3b61ef0ae834381c5006c92e8233f6e5 229 Gene3D G3DSA:3.40.50.2300 2 126 4.9E-40 T 12-10-2018 PA257_6748 3b61ef0ae834381c5006c92e8233f6e5 229 Gene3D G3DSA:1.10.10.10 127 228 1.3E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6748 3b61ef0ae834381c5006c92e8233f6e5 229 SUPERFAMILY SSF52172 3 125 2.85E-44 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6748 3b61ef0ae834381c5006c92e8233f6e5 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 3 226 3.5E-109 T 12-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 PA257_6748 3b61ef0ae834381c5006c92e8233f6e5 229 SMART SM00448 4 117 8.3E-46 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6748 3b61ef0ae834381c5006c92e8233f6e5 229 SUPERFAMILY SSF46894 128 226 7.11E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_6748 3b61ef0ae834381c5006c92e8233f6e5 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.4E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_6748 3b61ef0ae834381c5006c92e8233f6e5 229 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 Gene3D G3DSA:3.30.470.20 87 433 7.9E-156 T 12-10-2018 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 Gene3D G3DSA:3.40.50.20 1 85 1.2E-36 T 12-10-2018 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 SUPERFAMILY SSF52440 1 113 1.87E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 SMART SM01209 114 292 0.007 T 12-10-2018 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 SMART SM00878 336 441 1.6E-63 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 1.6E-228 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 SUPERFAMILY SSF56059 83 346 3.01E-69 T 12-10-2018 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.3E-38 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 SUPERFAMILY SSF51246 331 444 3.92E-42 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 Gene3D G3DSA:3.30.1490.20 131 203 7.9E-156 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 5.3E-87 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PA257_6124 ede04ff4cf4dcbe747c14149e941e370 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.3E-44 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_1596 7e8c75274b20cf78644806a1b57df0f9 249 SUPERFAMILY SSF64167 1 246 4.05E-80 T 12-10-2018 PA257_1596 7e8c75274b20cf78644806a1b57df0f9 249 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.8E-60 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 PA257_1596 7e8c75274b20cf78644806a1b57df0f9 249 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 248 38.027 T 12-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 PA257_1596 7e8c75274b20cf78644806a1b57df0f9 249 Gene3D G3DSA:3.40.1210.10 1 248 5.5E-85 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 PA257_1596 7e8c75274b20cf78644806a1b57df0f9 249 Pfam PF01975 Survival protein SurE 3 181 7.9E-55 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 PA257_2743 c978836e21215cccc5019262e81f0158 412 Gene3D G3DSA:3.40.630.10 46 398 8.3E-114 T 12-10-2018 PA257_2743 c978836e21215cccc5019262e81f0158 412 SUPERFAMILY SSF55031 212 323 3.14E-21 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PA257_2743 c978836e21215cccc5019262e81f0158 412 Pfam PF01546 Peptidase family M20/M25/M40 107 407 2.9E-31 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 PA257_2743 c978836e21215cccc5019262e81f0158 412 PIRSF PIRSF037238 29 410 1.9E-102 T 12-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase PA257_2743 c978836e21215cccc5019262e81f0158 412 Pfam PF07687 Peptidase dimerisation domain 209 307 1.3E-19 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain PA257_2743 c978836e21215cccc5019262e81f0158 412 Gene3D G3DSA:3.30.70.360 211 320 8.3E-114 T 12-10-2018 PA257_2743 c978836e21215cccc5019262e81f0158 412 SUPERFAMILY SSF53187 31 409 8.86E-50 T 12-10-2018 PA257_5293 840cba50e4de43400e0ffb295e8c3e57 212 SUPERFAMILY SSF51161 17 207 2.36E-45 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_5293 840cba50e4de43400e0ffb295e8c3e57 212 Gene3D G3DSA:2.160.10.10 1 212 3.7E-75 T 12-10-2018 PA257_5293 840cba50e4de43400e0ffb295e8c3e57 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 145 1.4E-6 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_1656 6a98d5b0f7cab16c1bef8114052e2dee 168 SUPERFAMILY SSF142433 4 161 3.4E-52 T 12-10-2018 IPR036653 CinA-like, C-terminal PA257_1656 6a98d5b0f7cab16c1bef8114052e2dee 168 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 161 2.4E-43 T 12-10-2018 IPR008136 CinA, C-terminal PA257_1656 6a98d5b0f7cab16c1bef8114052e2dee 168 Pfam PF02464 Competence-damaged protein 10 161 4.4E-55 T 12-10-2018 IPR008136 CinA, C-terminal PA257_1656 6a98d5b0f7cab16c1bef8114052e2dee 168 Gene3D G3DSA:3.90.950.20 1 162 5.9E-56 T 12-10-2018 IPR036653 CinA-like, C-terminal PA257_3331 6607c88719b3028697421f814a322ae4 210 SUPERFAMILY SSF47413 29 91 9.65E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_3331 6607c88719b3028697421f814a322ae4 210 SMART SM00530 33 88 1.7E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_3331 6607c88719b3028697421f814a322ae4 210 Pfam PF01381 Helix-turn-helix 36 86 3.0E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_3331 6607c88719b3028697421f814a322ae4 210 Pfam PF07883 Cupin domain 143 201 1.3E-10 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_3331 6607c88719b3028697421f814a322ae4 210 Gene3D G3DSA:1.10.260.40 23 94 9.9E-17 T 12-10-2018 PA257_3331 6607c88719b3028697421f814a322ae4 210 SUPERFAMILY SSF51182 73 207 2.17E-20 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_3331 6607c88719b3028697421f814a322ae4 210 Gene3D G3DSA:2.60.120.10 116 209 4.0E-27 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4674 7d8352db446f03dadbbf8530da8eeead 291 Hamap MF_01046 Protein/nucleic acid deglycase HchA [hchA]. 3 291 67.368 T 12-10-2018 IPR017283 Protein/nucleic acid deglycase HchA GO:0036524 PA257_4674 7d8352db446f03dadbbf8530da8eeead 291 PIRSF PIRSF037798 1 291 2.4E-165 T 12-10-2018 IPR017283 Protein/nucleic acid deglycase HchA GO:0036524 PA257_4674 7d8352db446f03dadbbf8530da8eeead 291 Pfam PF01965 DJ-1/PfpI family 77 196 2.2E-6 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_4674 7d8352db446f03dadbbf8530da8eeead 291 SUPERFAMILY SSF52317 50 285 8.51E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4674 7d8352db446f03dadbbf8530da8eeead 291 Gene3D G3DSA:3.40.50.880 6 289 4.1E-77 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_3369 f29ed656fff8b50e56e09459a9726064 353 Gene3D G3DSA:3.90.180.10 14 344 1.8E-131 T 12-10-2018 PA257_3369 f29ed656fff8b50e56e09459a9726064 353 Gene3D G3DSA:3.40.50.720 161 316 1.8E-131 T 12-10-2018 PA257_3369 f29ed656fff8b50e56e09459a9726064 353 SUPERFAMILY SSF51735 150 314 4.64E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3369 f29ed656fff8b50e56e09459a9726064 353 SMART SM00829 12 344 1.8E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_3369 f29ed656fff8b50e56e09459a9726064 353 Pfam PF00107 Zinc-binding dehydrogenase 187 310 5.5E-23 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_3369 f29ed656fff8b50e56e09459a9726064 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PA257_3369 f29ed656fff8b50e56e09459a9726064 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 145 3.2E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_3369 f29ed656fff8b50e56e09459a9726064 353 SUPERFAMILY SSF50129 13 173 3.77E-50 T 12-10-2018 IPR011032 GroES-like superfamily PA257_0269 92ab30ba627b8ac7a9d95fef611c425d 634 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 294 426 2.1E-37 T 12-10-2018 PA257_0269 92ab30ba627b8ac7a9d95fef611c425d 634 Gene3D G3DSA:3.10.180.10 438 632 1.4E-46 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_0269 92ab30ba627b8ac7a9d95fef611c425d 634 Pfam PF01261 Xylose isomerase-like TIM barrel 18 217 6.5E-37 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PA257_0269 92ab30ba627b8ac7a9d95fef611c425d 634 Gene3D G3DSA:3.10.180.10 290 437 4.1E-40 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_0269 92ab30ba627b8ac7a9d95fef611c425d 634 SUPERFAMILY SSF54593 292 621 4.18E-65 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_0269 92ab30ba627b8ac7a9d95fef611c425d 634 Gene3D G3DSA:3.20.20.150 1 268 4.4E-72 T 12-10-2018 PA257_0269 92ab30ba627b8ac7a9d95fef611c425d 634 SUPERFAMILY SSF51658 1 270 1.37E-75 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily PA257_0269 92ab30ba627b8ac7a9d95fef611c425d 634 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 441 565 6.6E-9 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_1995 20b2cea525bd83a631edb10adb7bcdcf 171 Gene3D G3DSA:1.25.40.20 8 118 8.2E-29 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily PA257_1995 20b2cea525bd83a631edb10adb7bcdcf 171 Pfam PF00023 Ankyrin repeat 114 145 6.0E-5 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_1995 20b2cea525bd83a631edb10adb7bcdcf 171 Gene3D G3DSA:1.25.40.960 119 170 3.7E-11 T 12-10-2018 PA257_1995 20b2cea525bd83a631edb10adb7bcdcf 171 SMART SM00248 48 77 3.3E-4 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_1995 20b2cea525bd83a631edb10adb7bcdcf 171 SMART SM00248 114 143 0.021 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_1995 20b2cea525bd83a631edb10adb7bcdcf 171 SMART SM00248 81 110 0.52 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 PA257_1995 20b2cea525bd83a631edb10adb7bcdcf 171 Pfam PF12796 Ankyrin repeats (3 copies) 24 109 1.9E-11 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain PA257_1995 20b2cea525bd83a631edb10adb7bcdcf 171 SUPERFAMILY SSF48403 23 167 3.59E-37 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily PA257_2947 7a6ab90869c4baa615347522850598f2 327 Gene3D G3DSA:3.40.1030.10 80 326 1.7E-60 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PA257_2947 7a6ab90869c4baa615347522850598f2 327 SUPERFAMILY SSF52418 81 324 1.44E-59 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PA257_2947 7a6ab90869c4baa615347522850598f2 327 Pfam PF00591 Glycosyl transferase family, a/b domain 105 251 2.9E-5 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PA257_2947 7a6ab90869c4baa615347522850598f2 327 Pfam PF02885 Glycosyl transferase family, helical bundle domain 22 76 3.4E-17 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 PA257_2947 7a6ab90869c4baa615347522850598f2 327 SUPERFAMILY SSF47648 18 78 7.06E-16 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PA257_2947 7a6ab90869c4baa615347522850598f2 327 Gene3D G3DSA:1.20.970.10 10 79 3.5E-26 T 12-10-2018 PA257_3252 568fd21e5a428b024e69ea231264041e 331 Gene3D G3DSA:2.60.120.1440 115 249 1.5E-31 T 12-10-2018 PA257_3252 568fd21e5a428b024e69ea231264041e 331 Pfam PF16220 Domain of unknown function (DUF4880) 15 55 9.7E-14 T 12-10-2018 IPR032623 FecR, N-terminal PA257_3252 568fd21e5a428b024e69ea231264041e 331 PIRSF PIRSF018266 5 327 2.2E-89 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_3252 568fd21e5a428b024e69ea231264041e 331 Pfam PF04773 FecR protein 122 211 2.2E-19 T 12-10-2018 IPR006860 FecR protein PA257_4788 4b3061eee71e21ae094c15c35a193c08 66 Gene3D G3DSA:3.10.450.50 6 66 1.8E-9 T 12-10-2018 PA257_4788 4b3061eee71e21ae094c15c35a193c08 66 Pfam PF02810 SEC-C motif 48 65 2.6E-11 T 12-10-2018 IPR004027 SEC-C motif PA257_4788 4b3061eee71e21ae094c15c35a193c08 66 SUPERFAMILY SSF103642 46 65 2.29E-8 T 12-10-2018 PA257_1363 69dc5b9e5d5d9255d51f639eecef8626 252 SMART SM00028 141 174 5.2E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_1363 69dc5b9e5d5d9255d51f639eecef8626 252 SMART SM00028 71 104 42.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_1363 69dc5b9e5d5d9255d51f639eecef8626 252 SMART SM00028 37 70 0.003 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_1363 69dc5b9e5d5d9255d51f639eecef8626 252 Pfam PF13414 TPR repeat 47 82 8.4E-7 T 12-10-2018 PA257_1363 69dc5b9e5d5d9255d51f639eecef8626 252 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 240 4.7E-74 T 12-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW PA257_1363 69dc5b9e5d5d9255d51f639eecef8626 252 Pfam PF13424 Tetratricopeptide repeat 105 172 1.5E-8 T 12-10-2018 PA257_1363 69dc5b9e5d5d9255d51f639eecef8626 252 SUPERFAMILY SSF48452 38 203 1.37E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1363 69dc5b9e5d5d9255d51f639eecef8626 252 Gene3D G3DSA:1.25.40.10 32 252 3.3E-61 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6860 585e03e8bccfd8e8df15570741962d40 70 Pfam PF06568 Domain of unknown function (DUF1127) 25 60 1.2E-11 T 12-10-2018 IPR009506 Protein of unknown function DUF1127 PA257_1920 9605327c7080f79ffc09e911c9c08b16 203 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 45 159 3.8E-29 T 12-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated PA257_1920 9605327c7080f79ffc09e911c9c08b16 203 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 8 193 2.0E-40 T 12-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated PA257_1920 9605327c7080f79ffc09e911c9c08b16 203 SUPERFAMILY SSF53448 16 200 1.78E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_1920 9605327c7080f79ffc09e911c9c08b16 203 Gene3D G3DSA:3.90.550.10 5 200 2.7E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6532 cae8e796931c5ca6d136ecfb52225d33 773 PIRSF PIRSF000144 2 770 0.0 T 12-10-2018 PA257_6532 cae8e796931c5ca6d136ecfb52225d33 773 SUPERFAMILY SSF50692 649 768 2.49E-14 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PA257_6532 cae8e796931c5ca6d136ecfb52225d33 773 Gene3D G3DSA:3.40.228.10 189 416 2.8E-68 T 12-10-2018 PA257_6532 cae8e796931c5ca6d136ecfb52225d33 773 SUPERFAMILY SSF53706 51 634 7.46E-146 T 12-10-2018 PA257_6532 cae8e796931c5ca6d136ecfb52225d33 773 Gene3D G3DSA:3.40.50.740 125 499 2.8E-68 T 12-10-2018 PA257_6532 cae8e796931c5ca6d136ecfb52225d33 773 Pfam PF00384 Molybdopterin oxidoreductase 113 253 8.0E-11 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_6532 cae8e796931c5ca6d136ecfb52225d33 773 Pfam PF00384 Molybdopterin oxidoreductase 318 495 1.0E-9 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_6532 cae8e796931c5ca6d136ecfb52225d33 773 Pfam PF01568 Molydopterin dinucleotide binding domain 652 737 1.7E-5 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PA257_6532 cae8e796931c5ca6d136ecfb52225d33 773 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 17 765 6.2E-287 T 12-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 PA257_5426 6a93cd4a72e6761806a6d4a1eacd8cc1 353 Pfam PF01370 NAD dependent epimerase/dehydratase family 27 251 2.7E-33 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_5426 6a93cd4a72e6761806a6d4a1eacd8cc1 353 SUPERFAMILY SSF51735 24 351 1.5E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5426 6a93cd4a72e6761806a6d4a1eacd8cc1 353 Gene3D G3DSA:3.40.50.720 14 353 1.9E-72 T 12-10-2018 PA257_2206 2fdfdd80d12fa19bcd4a8726c02b7696 345 SUPERFAMILY SSF46689 292 341 4.93E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2206 2fdfdd80d12fa19bcd4a8726c02b7696 345 SMART SM00342 256 338 7.8E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2206 2fdfdd80d12fa19bcd4a8726c02b7696 345 Pfam PF12833 Helix-turn-helix domain 262 339 3.6E-14 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2206 2fdfdd80d12fa19bcd4a8726c02b7696 345 Gene3D G3DSA:1.10.10.60 235 345 3.8E-22 T 12-10-2018 PA257_2206 2fdfdd80d12fa19bcd4a8726c02b7696 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 6.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_2206 2fdfdd80d12fa19bcd4a8726c02b7696 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 6.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_2206 2fdfdd80d12fa19bcd4a8726c02b7696 345 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 27 210 6.5E-48 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_6536 87291a58c3a272d7ecf75393b695a976 196 Gene3D G3DSA:1.20.1250.110 32 195 3.0E-41 T 12-10-2018 PA257_6536 87291a58c3a272d7ecf75393b695a976 196 SMART SM00830 34 114 8.5E-14 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_6536 87291a58c3a272d7ecf75393b695a976 196 Pfam PF01817 Chorismate mutase type II 42 112 3.4E-8 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_6536 87291a58c3a272d7ecf75393b695a976 196 SUPERFAMILY SSF48600 41 193 2.91E-30 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_6536 87291a58c3a272d7ecf75393b695a976 196 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 38 145 3.9E-38 T 12-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_6536 87291a58c3a272d7ecf75393b695a976 196 PIRSF PIRSF026640 9 194 1.9E-62 T 12-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_6292 80549617681784977a45ebc00ba67711 378 SUPERFAMILY SSF53756 8 365 4.45E-62 T 12-10-2018 PA257_6292 80549617681784977a45ebc00ba67711 378 Gene3D G3DSA:3.40.50.2000 42 358 1.5E-53 T 12-10-2018 PA257_6292 80549617681784977a45ebc00ba67711 378 Gene3D G3DSA:3.40.50.2000 170 354 1.5E-53 T 12-10-2018 PA257_6292 80549617681784977a45ebc00ba67711 378 Pfam PF00534 Glycosyl transferases group 1 185 335 5.1E-29 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_6292 80549617681784977a45ebc00ba67711 378 Pfam PF13439 Glycosyltransferase Family 4 41 172 5.6E-9 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PA257_1662 8c3b2b9d59dc54166b47e1f8a2092265 73 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 2.0E-23 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor PA257_1662 8c3b2b9d59dc54166b47e1f8a2092265 73 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 3.5E-31 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor PA257_4579 d325730c051385c8d648d63c404a5031 303 Gene3D G3DSA:3.60.110.10 1 295 7.3E-103 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_4579 d325730c051385c8d648d63c404a5031 303 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 284 8.1E-135 T 12-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 PA257_4579 d325730c051385c8d648d63c404a5031 303 SUPERFAMILY SSF56317 1 285 3.79E-81 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_4579 d325730c051385c8d648d63c404a5031 303 Pfam PF00795 Carbon-nitrogen hydrolase 7 266 2.3E-46 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PA257_4744 d0f3800acf9ae0899bb77e664943f530 120 Gene3D G3DSA:3.30.160.370 1 120 9.1E-56 T 12-10-2018 PA257_4744 d0f3800acf9ae0899bb77e664943f530 120 Pfam PF16703 Domain of unknown function (DUF5064) 1 116 2.2E-52 T 12-10-2018 IPR032024 Protein of unknown function DUF5064 PA257_5706 91ce38b9e7965772b087a355c5c98c98 312 Pfam PF06834 TraU protein 33 300 5.0E-67 T 12-10-2018 IPR009649 TraU PA257_5706 91ce38b9e7965772b087a355c5c98c98 312 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 26 310 4.2E-131 T 12-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 PA257_5443 b2a1b62ca21a8dd5c42f773f679a4587 234 SUPERFAMILY SSF56112 18 187 6.83E-10 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_5443 b2a1b62ca21a8dd5c42f773f679a4587 234 PIRSF PIRSF026326 1 234 2.9E-110 T 12-10-2018 IPR027023 Putative lipopolysaccharide kinase InaA PA257_5443 b2a1b62ca21a8dd5c42f773f679a4587 234 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 18 221 4.2E-74 T 12-10-2018 PA257_0753 651a6f019d073b93766d1bc63a50ca19 348 Gene3D G3DSA:3.40.190.10 32 326 1.1E-120 T 12-10-2018 PA257_0753 651a6f019d073b93766d1bc63a50ca19 348 Pfam PF13416 Bacterial extracellular solute-binding protein 49 303 1.2E-45 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_0753 651a6f019d073b93766d1bc63a50ca19 348 SUPERFAMILY SSF53850 29 345 5.44E-67 T 12-10-2018 PA257_0753 651a6f019d073b93766d1bc63a50ca19 348 Gene3D G3DSA:3.40.190.10 132 333 1.1E-120 T 12-10-2018 PA257_0686 e64aeab1d984164fd943c66198290300 322 Gene3D G3DSA:3.40.50.1820 33 233 5.0E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0686 e64aeab1d984164fd943c66198290300 322 Pfam PF10503 Esterase PHB depolymerase 55 181 3.8E-16 T 12-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 PA257_0686 e64aeab1d984164fd943c66198290300 322 SUPERFAMILY SSF53474 46 297 1.61E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2461 aa487a6c3cd36459bdaf54c1bf10c0d3 376 PIRSF PIRSF015557 1 376 2.4E-171 T 12-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 PA257_2461 aa487a6c3cd36459bdaf54c1bf10c0d3 376 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 4 372 4.7E-162 T 12-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 PA257_2461 aa487a6c3cd36459bdaf54c1bf10c0d3 376 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 4 372 8.1E-153 T 12-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 PA257_5221 c305b03e80e05762ffd51befd9da57fd 229 Pfam PF11444 Protein of unknown function (DUF2895) 6 206 1.7E-89 T 12-10-2018 IPR021548 Protein of unknown function DUF2895 PA257_5221 c305b03e80e05762ffd51befd9da57fd 229 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 206 1.7E-94 T 12-10-2018 IPR021548 Protein of unknown function DUF2895 PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 SUPERFAMILY SSF51735 7 253 2.42E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 Gene3D G3DSA:3.40.50.720 7 293 4.2E-72 T 12-10-2018 PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 4.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 4.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 205 4.1E-7 T 12-10-2018 PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 7.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 7.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 7.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4800 acd3e3642ab29e28ce18f7cbe3cc31ff 305 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 249 4.1E-42 T 12-10-2018 PA257_4087 67096b0a38e9b108e53e09100a4c6013 286 TIGRFAM TIGR00417 speE: spermidine synthase 4 275 9.8E-107 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PA257_4087 67096b0a38e9b108e53e09100a4c6013 286 Pfam PF17284 Spermidine synthase tetramerisation domain 10 54 6.8E-15 T 12-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PA257_4087 67096b0a38e9b108e53e09100a4c6013 286 SUPERFAMILY SSF53335 3 281 2.26E-89 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_4087 67096b0a38e9b108e53e09100a4c6013 286 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 2 281 39.997 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PA257_4087 67096b0a38e9b108e53e09100a4c6013 286 Gene3D G3DSA:2.30.140.10 1 51 1.3E-21 T 12-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PA257_4087 67096b0a38e9b108e53e09100a4c6013 286 Gene3D G3DSA:3.40.50.150 52 284 1.7E-78 T 12-10-2018 PA257_4087 67096b0a38e9b108e53e09100a4c6013 286 Pfam PF01564 Spermine/spermidine synthase domain 57 236 6.7E-63 T 12-10-2018 PA257_4087 67096b0a38e9b108e53e09100a4c6013 286 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 78 91 - T 12-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PA257_3929 bede2eccbc21081021dd6526c0a7d2f6 356 SUPERFAMILY SSF56112 18 340 1.48E-60 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_3929 bede2eccbc21081021dd6526c0a7d2f6 356 Gene3D G3DSA:3.90.1200.10 118 356 3.4E-67 T 12-10-2018 PA257_3929 bede2eccbc21081021dd6526c0a7d2f6 356 Pfam PF01636 Phosphotransferase enzyme family 38 273 4.5E-50 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase PA257_3929 bede2eccbc21081021dd6526c0a7d2f6 356 Gene3D G3DSA:3.30.200.20 15 116 1.5E-30 T 12-10-2018 PA257_2130 aaac062292759f6c2e0fb61e4526008a 232 SUPERFAMILY SSF53335 12 226 5.88E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2130 aaac062292759f6c2e0fb61e4526008a 232 Pfam PF13489 Methyltransferase domain 47 199 1.9E-27 T 12-10-2018 PA257_2130 aaac062292759f6c2e0fb61e4526008a 232 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 8 231 37.65 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 PA257_2130 aaac062292759f6c2e0fb61e4526008a 232 Gene3D G3DSA:3.40.50.150 8 231 6.5E-79 T 12-10-2018 PA257_2130 aaac062292759f6c2e0fb61e4526008a 232 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 225 1.4E-87 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 PA257_0977 d67ccbbb5ac3ad0bba25958fe54f1b20 259 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 46 244 3.4E-57 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PA257_0977 d67ccbbb5ac3ad0bba25958fe54f1b20 259 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 246 4.1E-121 T 12-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 PA257_0977 d67ccbbb5ac3ad0bba25958fe54f1b20 259 Gene3D G3DSA:3.90.850.10 36 249 2.1E-74 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_0977 d67ccbbb5ac3ad0bba25958fe54f1b20 259 SUPERFAMILY SSF56529 39 249 7.85E-71 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_0318 8a571a0744dabb51b35e128b916d235d 186 SUPERFAMILY SSF46689 141 183 9.41E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0318 8a571a0744dabb51b35e128b916d235d 186 SUPERFAMILY SSF53041 6 139 3.4E-40 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PA257_0318 8a571a0744dabb51b35e128b916d235d 186 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PA257_0318 8a571a0744dabb51b35e128b916d235d 186 SMART SM00857 5 139 1.2E-47 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_0318 8a571a0744dabb51b35e128b916d235d 186 Gene3D G3DSA:3.40.50.1390 5 127 1.4E-40 T 12-10-2018 PA257_0318 8a571a0744dabb51b35e128b916d235d 186 Pfam PF00239 Resolvase, N terminal domain 6 139 2.6E-39 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PA257_0318 8a571a0744dabb51b35e128b916d235d 186 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PA257_0318 8a571a0744dabb51b35e128b916d235d 186 Pfam PF02796 Helix-turn-helix domain of resolvase 141 184 1.1E-12 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 PA257_0186 0b7f2ff26a1428c11a4b0df38405f49f 312 Gene3D G3DSA:1.10.10.10 3 87 5.9E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0186 0b7f2ff26a1428c11a4b0df38405f49f 312 Gene3D G3DSA:3.40.190.10 92 290 2.6E-60 T 12-10-2018 PA257_0186 0b7f2ff26a1428c11a4b0df38405f49f 312 SUPERFAMILY SSF46785 4 85 2.1E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0186 0b7f2ff26a1428c11a4b0df38405f49f 312 Gene3D G3DSA:3.40.190.10 164 264 2.6E-60 T 12-10-2018 PA257_0186 0b7f2ff26a1428c11a4b0df38405f49f 312 Pfam PF03466 LysR substrate binding domain 90 293 7.0E-44 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0186 0b7f2ff26a1428c11a4b0df38405f49f 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.5E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0186 0b7f2ff26a1428c11a4b0df38405f49f 312 SUPERFAMILY SSF53850 91 296 4.5E-43 T 12-10-2018 PA257_4051 61c968e239210e815b200d10058fa788 244 Gene3D G3DSA:3.30.300.30 92 199 5.9E-39 T 12-10-2018 PA257_4051 61c968e239210e815b200d10058fa788 244 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 6 191 5.7E-73 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PA257_4051 61c968e239210e815b200d10058fa788 244 Gene3D G3DSA:3.30.70.1530 19 90 1.0E-28 T 12-10-2018 PA257_4051 61c968e239210e815b200d10058fa788 244 Pfam PF01514 Secretory protein of YscJ/FliF family 8 186 1.8E-26 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF PA257_4051 61c968e239210e815b200d10058fa788 244 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 6.4E-30 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PA257_4051 61c968e239210e815b200d10058fa788 244 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 96 111 6.4E-30 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PA257_4051 61c968e239210e815b200d10058fa788 244 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 6.4E-30 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PA257_4051 61c968e239210e815b200d10058fa788 244 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 116 129 6.4E-30 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PA257_4051 61c968e239210e815b200d10058fa788 244 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 76 89 6.4E-30 T 12-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PA257_6918 67c68d1ffe826c0238250d10f7fc8215 288 SUPERFAMILY SSF53613 4 281 1.56E-70 T 12-10-2018 IPR029056 Ribokinase-like PA257_6918 67c68d1ffe826c0238250d10f7fc8215 288 Gene3D G3DSA:3.40.1190.20 1 288 5.7E-89 T 12-10-2018 IPR029056 Ribokinase-like PA257_6918 67c68d1ffe826c0238250d10f7fc8215 288 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 6 287 1.9E-111 T 12-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 PA257_6918 67c68d1ffe826c0238250d10f7fc8215 288 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 4 288 54.033 T 12-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 PA257_6918 67c68d1ffe826c0238250d10f7fc8215 288 Pfam PF08543 Phosphomethylpyrimidine kinase 77 262 2.7E-12 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 PA257_2462 a7647a1e398569b18378d94138760b73 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.3E-21 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like PA257_2462 a7647a1e398569b18378d94138760b73 188 Hamap MF_00141 Elongation factor P [efp]. 1 186 48.49 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 PA257_2462 a7647a1e398569b18378d94138760b73 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 3.3E-21 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 PA257_2462 a7647a1e398569b18378d94138760b73 188 SUPERFAMILY SSF50249 65 128 1.67E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2462 a7647a1e398569b18378d94138760b73 188 SUPERFAMILY SSF50104 1 62 5.48E-17 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily PA257_2462 a7647a1e398569b18378d94138760b73 188 Gene3D G3DSA:2.30.30.30 1 63 1.5E-22 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 PA257_2462 a7647a1e398569b18378d94138760b73 188 SUPERFAMILY SSF50249 130 186 6.17E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2462 a7647a1e398569b18378d94138760b73 188 SMART SM01185 67 122 3.1E-14 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 PA257_2462 a7647a1e398569b18378d94138760b73 188 Gene3D G3DSA:2.40.50.140 129 188 2.5E-27 T 12-10-2018 PA257_2462 a7647a1e398569b18378d94138760b73 188 PIRSF PIRSF005901 1 187 2.8E-57 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP PA257_2462 a7647a1e398569b18378d94138760b73 188 SMART SM00841 130 185 7.5E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 PA257_2462 a7647a1e398569b18378d94138760b73 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 8.5E-61 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 PA257_2462 a7647a1e398569b18378d94138760b73 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 122 7.7E-13 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 PA257_2462 a7647a1e398569b18378d94138760b73 188 Gene3D G3DSA:2.40.50.140 64 128 1.1E-20 T 12-10-2018 PA257_0260 b3423078fe83366fff10137868cd0ecd 313 SUPERFAMILY SSF53850 96 301 3.58E-36 T 12-10-2018 PA257_0260 b3423078fe83366fff10137868cd0ecd 313 Pfam PF03466 LysR substrate binding domain 94 300 1.0E-38 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0260 b3423078fe83366fff10137868cd0ecd 313 SUPERFAMILY SSF46785 5 116 5.99E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0260 b3423078fe83366fff10137868cd0ecd 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.6E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0260 b3423078fe83366fff10137868cd0ecd 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.6E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0260 b3423078fe83366fff10137868cd0ecd 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.6E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0260 b3423078fe83366fff10137868cd0ecd 313 Gene3D G3DSA:3.40.190.290 96 308 2.2E-32 T 12-10-2018 PA257_0260 b3423078fe83366fff10137868cd0ecd 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 4.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0260 b3423078fe83366fff10137868cd0ecd 313 Gene3D G3DSA:1.10.10.10 7 94 2.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0600 3bf12ccc14a6558634a4ee461a4fd35c 295 SUPERFAMILY SSF69593 8 293 6.67E-58 T 12-10-2018 PA257_0600 3bf12ccc14a6558634a4ee461a4fd35c 295 Pfam PF01553 Acyltransferase 73 226 6.0E-15 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_0600 3bf12ccc14a6558634a4ee461a4fd35c 295 SMART SM00563 85 227 3.9E-19 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 Gene3D G3DSA:3.30.413.10 101 257 9.0E-63 T 12-10-2018 PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 15 412 2.2E-111 T 12-10-2018 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 32 88 1.2E-10 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 272 330 4.3E-15 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 Gene3D G3DSA:3.30.413.10 348 449 2.3E-9 T 12-10-2018 PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 SUPERFAMILY SSF56014 351 446 1.96E-11 T 12-10-2018 PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 SUPERFAMILY SSF55124 9 93 3.27E-16 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 102 244 3.5E-14 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 SUPERFAMILY SSF55124 215 342 5.89E-23 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 SUPERFAMILY SSF56014 103 257 3.53E-20 T 12-10-2018 PA257_2404 8fa91df42ecdb5b55f83c01e753c48c3 456 Gene3D G3DSA:3.90.480.10 33 329 9.0E-63 T 12-10-2018 PA257_1849 c548c9c82516b2b068af74099bd1fd87 585 Pfam PF06980 Protein of unknown function (DUF1302) 31 585 3.4E-221 T 12-10-2018 IPR010727 Protein of unknown function DUF1302 PA257_2307 13e95127b59357ab145b2e7087de4ef5 223 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.649 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 PA257_2307 13e95127b59357ab145b2e7087de4ef5 223 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 7.1E-60 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 PA257_2307 13e95127b59357ab145b2e7087de4ef5 223 PIRSF PIRSF006102 3 213 2.1E-65 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 PA257_2307 13e95127b59357ab145b2e7087de4ef5 223 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.7E-108 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 PA257_3756 4128918d39267af9cbd7eb2b407d9717 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_3756 4128918d39267af9cbd7eb2b407d9717 506 SUPERFAMILY SSF53720 12 497 3.14E-162 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_3756 4128918d39267af9cbd7eb2b407d9717 506 Pfam PF00171 Aldehyde dehydrogenase family 34 493 7.1E-164 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_3756 4128918d39267af9cbd7eb2b407d9717 506 Gene3D G3DSA:3.40.605.10 23 492 6.7E-164 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_3756 4128918d39267af9cbd7eb2b407d9717 506 Gene3D G3DSA:3.40.309.10 266 464 6.7E-164 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_3756 4128918d39267af9cbd7eb2b407d9717 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_0500 ee268646c9ee11dbe0c401f63209ae09 74 SUPERFAMILY SSF47413 14 64 4.36E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_0500 ee268646c9ee11dbe0c401f63209ae09 74 Gene3D G3DSA:1.10.260.40 11 73 4.4E-10 T 12-10-2018 PA257_3145 ee268646c9ee11dbe0c401f63209ae09 74 SUPERFAMILY SSF47413 14 64 4.36E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_3145 ee268646c9ee11dbe0c401f63209ae09 74 Gene3D G3DSA:1.10.260.40 11 73 4.4E-10 T 12-10-2018 PA257_6957 3f39534078091ac7a275a6c21bfac2a9 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 8.5E-203 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 PA257_6957 3f39534078091ac7a275a6c21bfac2a9 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 296 1.6E-7 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_6957 3f39534078091ac7a275a6c21bfac2a9 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.5E-5 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_6957 3f39534078091ac7a275a6c21bfac2a9 454 Gene3D G3DSA:3.90.550.10 1 224 1.1E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6957 3f39534078091ac7a275a6c21bfac2a9 454 SUPERFAMILY SSF53448 1 249 1.07E-63 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6957 3f39534078091ac7a275a6c21bfac2a9 454 SUPERFAMILY SSF51161 252 439 2.52E-49 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_6957 3f39534078091ac7a275a6c21bfac2a9 454 Pfam PF12804 MobA-like NTP transferase domain 6 121 2.6E-24 T 12-10-2018 IPR025877 MobA-like NTP transferase PA257_6957 3f39534078091ac7a275a6c21bfac2a9 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 43.28 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 PA257_6957 3f39534078091ac7a275a6c21bfac2a9 454 Gene3D G3DSA:2.160.10.10 225 453 3.2E-67 T 12-10-2018 PA257_0200 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Gene3D G3DSA:3.40.50.2300 2 132 1.4E-30 T 12-10-2018 PA257_0200 6d9ce055698b4c5e1ccca8c94f78aaf6 349 PIRSF PIRSF000876 1 345 6.1E-136 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_0200 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Pfam PF00072 Response regulator receiver domain 5 107 1.6E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0200 6d9ce055698b4c5e1ccca8c94f78aaf6 349 SMART SM00448 3 118 5.4E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0200 6d9ce055698b4c5e1ccca8c94f78aaf6 349 SUPERFAMILY SSF52172 1 107 6.4E-27 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0200 6d9ce055698b4c5e1ccca8c94f78aaf6 349 SUPERFAMILY SSF52738 154 341 1.44E-71 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal PA257_0200 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Pfam PF01339 CheB methylesterase 158 336 2.3E-62 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_0200 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 341 41.843 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_0200 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Gene3D G3DSA:3.40.50.180 147 345 1.8E-79 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 Gene3D G3DSA:3.40.50.920 500 625 8.9E-43 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 Gene3D G3DSA:3.40.50.970 323 494 3.6E-65 T 12-10-2018 PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 SMART SM00861 324 488 8.8E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 Pfam PF02780 Transketolase, C-terminal domain 500 616 3.8E-27 T 12-10-2018 IPR033248 Transketolase, C-terminal domain PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 ProSitePatterns PS00802 Transketolase signature 2. 430 446 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 SUPERFAMILY SSF52518 321 508 1.23E-56 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 SUPERFAMILY SSF52922 496 625 2.62E-33 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 22 624 2.0E-266 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 18 289 1.2E-120 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 17 625 46.223 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 SUPERFAMILY SSF52518 15 386 7.41E-77 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_1106 95205bc345d880a4f5a4a56c126d2d11 627 Pfam PF02779 Transketolase, pyrimidine binding domain 325 485 1.8E-37 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_4709 71b804c292d1810ca425f2166759cdaf 147 PRINTS PR01004 Flagellar FliJ protein signature 5 27 4.1E-13 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PA257_4709 71b804c292d1810ca425f2166759cdaf 147 PRINTS PR01004 Flagellar FliJ protein signature 109 127 4.1E-13 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PA257_4709 71b804c292d1810ca425f2166759cdaf 147 PRINTS PR01004 Flagellar FliJ protein signature 87 108 4.1E-13 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PA257_4709 71b804c292d1810ca425f2166759cdaf 147 PRINTS PR01004 Flagellar FliJ protein signature 45 62 4.1E-13 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PA257_4709 71b804c292d1810ca425f2166759cdaf 147 PRINTS PR01004 Flagellar FliJ protein signature 64 85 4.1E-13 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PA257_4709 71b804c292d1810ca425f2166759cdaf 147 PRINTS PR01004 Flagellar FliJ protein signature 127 147 4.1E-13 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PA257_4709 71b804c292d1810ca425f2166759cdaf 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 141 6.7E-33 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PA257_4709 71b804c292d1810ca425f2166759cdaf 147 Pfam PF02050 Flagellar FliJ protein 21 141 2.6E-36 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PA257_4709 71b804c292d1810ca425f2166759cdaf 147 PIRSF PIRSF019404 1 147 2.5E-39 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PA257_3497 6d6955a2ffb5d5bfeedec70ac1166c36 474 Gene3D G3DSA:3.40.605.10 21 464 9.1E-174 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_3497 6d6955a2ffb5d5bfeedec70ac1166c36 474 Gene3D G3DSA:3.40.309.10 249 439 9.1E-174 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_3497 6d6955a2ffb5d5bfeedec70ac1166c36 474 SUPERFAMILY SSF53720 2 472 1.7E-150 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_3497 6d6955a2ffb5d5bfeedec70ac1166c36 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_3497 6d6955a2ffb5d5bfeedec70ac1166c36 474 Pfam PF00171 Aldehyde dehydrogenase family 14 470 2.5E-159 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_2169 ea12d9980b9f2dcd58c7aa1d8c22c97f 267 Pfam PF00583 Acetyltransferase (GNAT) family 169 237 4.2E-8 T 12-10-2018 IPR000182 GNAT domain PA257_2169 ea12d9980b9f2dcd58c7aa1d8c22c97f 267 Gene3D G3DSA:3.10.180.10 1 117 1.3E-39 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_2169 ea12d9980b9f2dcd58c7aa1d8c22c97f 267 Gene3D G3DSA:3.40.630.30 118 263 2.4E-21 T 12-10-2018 PA257_2169 ea12d9980b9f2dcd58c7aa1d8c22c97f 267 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 112 1.7E-4 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_2169 ea12d9980b9f2dcd58c7aa1d8c22c97f 267 SUPERFAMILY SSF55729 125 257 7.89E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_2169 ea12d9980b9f2dcd58c7aa1d8c22c97f 267 SUPERFAMILY SSF54593 4 115 1.34E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 Gene3D G3DSA:3.20.20.70 411 769 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 Pfam PF01645 Conserved region in glutamate synthase 770 1133 1.1E-148 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 Pfam PF01493 GXGXG motif 1214 1400 2.9E-77 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 Gene3D G3DSA:3.60.20.10 1 523 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 Pfam PF00310 Glutamine amidotransferases class-II 1 406 9.8E-168 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 Gene3D G3DSA:3.20.20.70 461 1147 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 SUPERFAMILY SSF51395 423 1165 5.04E-250 T 12-10-2018 PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 SUPERFAMILY SSF69336 1190 1444 6.41E-87 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 SUPERFAMILY SSF56235 2 410 1.47E-138 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 Pfam PF04898 Glutamate synthase central domain 436 714 2.3E-100 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 PA257_6327 a1752dfea0458b19fd9e7bf80e8820eb 1459 Gene3D G3DSA:2.160.20.60 1173 1447 7.1E-101 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 PA257_6558 44c86db10c22c419c9489dd15443d0e2 384 SUPERFAMILY SSF53187 6 378 4.0E-52 T 12-10-2018 PA257_6558 44c86db10c22c419c9489dd15443d0e2 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 374 3.0E-111 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 PA257_6558 44c86db10c22c419c9489dd15443d0e2 384 Pfam PF01546 Peptidase family M20/M25/M40 73 375 6.0E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 PA257_6558 44c86db10c22c419c9489dd15443d0e2 384 SUPERFAMILY SSF55031 177 291 2.39E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PA257_6558 44c86db10c22c419c9489dd15443d0e2 384 Gene3D G3DSA:3.40.630.10 17 363 7.5E-81 T 12-10-2018 PA257_6558 44c86db10c22c419c9489dd15443d0e2 384 Pfam PF07687 Peptidase dimerisation domain 175 285 1.8E-26 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain PA257_6558 44c86db10c22c419c9489dd15443d0e2 384 Gene3D G3DSA:3.30.70.360 177 292 7.5E-81 T 12-10-2018 PA257_2853 2efd4260201f53ae38e151324c09ecd3 93 TIGRFAM TIGR03510 XapX: XapX domain 4 48 3.6E-19 T 12-10-2018 IPR020017 XapX domain PA257_2853 2efd4260201f53ae38e151324c09ecd3 93 Pfam PF07235 Protein of unknown function (DUF1427) 2 83 1.8E-36 T 12-10-2018 IPR009872 Protein of unknown function DUF1427 PA257_1180 157bd503923a522c2c05f78f8fe9171e 549 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 403 422 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_1180 157bd503923a522c2c05f78f8fe9171e 549 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 444 1.4E-28 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_1180 157bd503923a522c2c05f78f8fe9171e 549 Gene3D G3DSA:1.20.140.10 291 446 8.8E-35 T 12-10-2018 PA257_1180 157bd503923a522c2c05f78f8fe9171e 549 Gene3D G3DSA:2.40.110.20 132 290 1.3E-57 T 12-10-2018 PA257_1180 157bd503923a522c2c05f78f8fe9171e 549 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 182 278 2.7E-12 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_1180 157bd503923a522c2c05f78f8fe9171e 549 SUPERFAMILY SSF56645 61 299 1.69E-36 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_1180 157bd503923a522c2c05f78f8fe9171e 549 SUPERFAMILY SSF47203 295 447 2.74E-40 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_0791 82798b4769b956f52734b08f00ad3638 112 PRINTS PR00332 Histidine triad family signature 92 102 1.4E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_0791 82798b4769b956f52734b08f00ad3638 112 PRINTS PR00332 Histidine triad family signature 25 43 1.4E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_0791 82798b4769b956f52734b08f00ad3638 112 PRINTS PR00332 Histidine triad family signature 4 20 1.4E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_0791 82798b4769b956f52734b08f00ad3638 112 SUPERFAMILY SSF54197 1 111 3.54E-40 T 12-10-2018 IPR036265 HIT-like superfamily PA257_0791 82798b4769b956f52734b08f00ad3638 112 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 12-10-2018 IPR019808 Histidine triad, conserved site PA257_0791 82798b4769b956f52734b08f00ad3638 112 Gene3D G3DSA:3.30.428.10 1 112 1.1E-43 T 12-10-2018 IPR036265 HIT-like superfamily PA257_0791 82798b4769b956f52734b08f00ad3638 112 Pfam PF01230 HIT domain 11 106 8.6E-26 T 12-10-2018 IPR001310 Histidine triad (HIT) protein PA257_0055 1c47c59faee59c6e00cf27275bcc61ef 209 Gene3D G3DSA:3.30.70.1290 1 136 1.8E-34 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 PA257_0055 1c47c59faee59c6e00cf27275bcc61ef 209 SUPERFAMILY SSF143422 3 104 4.84E-24 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 PA257_0055 1c47c59faee59c6e00cf27275bcc61ef 209 SMART SM01321 2 101 1.4E-28 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PA257_0055 1c47c59faee59c6e00cf27275bcc61ef 209 Pfam PF01797 Transposase IS200 like 5 99 5.8E-13 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PA257_3785 98cd4b0fe23495fd25f27e3ceacb3959 175 SUPERFAMILY SSF52540 2 169 2.34E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3785 98cd4b0fe23495fd25f27e3ceacb3959 175 Pfam PF13521 AAA domain 5 160 1.6E-30 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain PA257_3785 98cd4b0fe23495fd25f27e3ceacb3959 175 Gene3D G3DSA:3.40.50.300 1 165 1.9E-38 T 12-10-2018 PA257_0430 ae62e6c61610dfa81b6db8efe5fb5b76 292 SUPERFAMILY SSF109604 13 281 2.6E-65 T 12-10-2018 PA257_0430 ae62e6c61610dfa81b6db8efe5fb5b76 292 Pfam PF08668 HDOD domain 20 213 4.0E-54 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD PA257_0430 ae62e6c61610dfa81b6db8efe5fb5b76 292 Gene3D G3DSA:1.10.3210.10 12 279 1.3E-63 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 Gene3D G3DSA:3.50.50.60 110 244 1.4E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 SUPERFAMILY SSF51905 1 323 7.02E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 Gene3D G3DSA:3.50.50.60 8 280 1.4E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.6E-22 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 6.6E-22 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 6.6E-22 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.6E-22 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.6E-22 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 281 1.0E-50 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 4.1E-15 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.1E-15 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.1E-15 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 359 374 4.1E-15 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 4.1E-15 T 12-10-2018 PA257_6737 539575ad0b5ea4e963d680c7c49d7de9 384 Gene3D G3DSA:3.30.390.120 316 379 1.2E-27 T 12-10-2018 PA257_1762 86a0053a65a42a11b43acc73c159ff20 491 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 462 4.8E-91 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_1762 86a0053a65a42a11b43acc73c159ff20 491 Gene3D G3DSA:2.20.200.10 98 351 1.3E-109 T 12-10-2018 PA257_1762 86a0053a65a42a11b43acc73c159ff20 491 SUPERFAMILY SSF56954 4 464 3.4E-89 T 12-10-2018 PA257_1762 86a0053a65a42a11b43acc73c159ff20 491 Gene3D G3DSA:1.20.1600.10 51 463 1.3E-109 T 12-10-2018 PA257_1762 86a0053a65a42a11b43acc73c159ff20 491 Pfam PF02321 Outer membrane efflux protein 61 249 3.3E-20 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_1762 86a0053a65a42a11b43acc73c159ff20 491 Pfam PF02321 Outer membrane efflux protein 282 460 6.5E-20 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_5617 2c0b4980efe46bcc312712036439462c 288 Gene3D G3DSA:3.40.50.300 2 269 2.6E-47 T 12-10-2018 PA257_5617 2c0b4980efe46bcc312712036439462c 288 Pfam PF13614 AAA domain 4 158 4.9E-25 T 12-10-2018 IPR025669 AAA domain PA257_5617 2c0b4980efe46bcc312712036439462c 288 SUPERFAMILY SSF52540 8 266 3.61E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3808 01f1e2e0132448264ea252dfcc73332c 734 SUPERFAMILY SSF56003 136 733 1.1E-158 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PA257_3808 01f1e2e0132448264ea252dfcc73332c 734 Gene3D G3DSA:3.90.1170.50 37 136 1.4E-66 T 12-10-2018 PA257_3808 01f1e2e0132448264ea252dfcc73332c 734 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 151 675 1.3E-108 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_3808 01f1e2e0132448264ea252dfcc73332c 734 Gene3D G3DSA:3.30.365.10 20 278 1.4E-66 T 12-10-2018 PA257_3808 01f1e2e0132448264ea252dfcc73332c 734 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 22 135 1.5E-16 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PA257_3808 01f1e2e0132448264ea252dfcc73332c 734 Gene3D G3DSA:3.30.365.10 433 590 2.0E-102 T 12-10-2018 PA257_3808 01f1e2e0132448264ea252dfcc73332c 734 Gene3D G3DSA:3.30.365.10 360 731 2.0E-102 T 12-10-2018 PA257_3808 01f1e2e0132448264ea252dfcc73332c 734 SUPERFAMILY SSF54665 7 147 8.11E-33 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily PA257_3808 01f1e2e0132448264ea252dfcc73332c 734 SMART SM01008 22 136 2.3E-35 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PA257_3808 01f1e2e0132448264ea252dfcc73332c 734 Gene3D G3DSA:3.30.365.10 137 336 1.4E-66 T 12-10-2018 PA257_5557 aeb42b369c907f1a1e25c29bfde4ba35 549 Pfam PF08486 Stage II sporulation protein 317 374 8.9E-6 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal PA257_5557 aeb42b369c907f1a1e25c29bfde4ba35 549 Pfam PF10062 Predicted secreted protein (DUF2300) 85 207 1.4E-38 T 12-10-2018 IPR018748 Domain of unknown function DUF2300, secreted PA257_5557 aeb42b369c907f1a1e25c29bfde4ba35 549 Pfam PF10062 Predicted secreted protein (DUF2300) 413 531 1.4E-43 T 12-10-2018 IPR018748 Domain of unknown function DUF2300, secreted PA257_1388 2626b3788e8d4dc3a959eae522a35835 317 Gene3D G3DSA:3.40.50.880 2 206 1.9E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_1388 2626b3788e8d4dc3a959eae522a35835 317 SMART SM00342 229 312 4.4E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1388 2626b3788e8d4dc3a959eae522a35835 317 SUPERFAMILY SSF52317 5 194 7.64E-44 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_1388 2626b3788e8d4dc3a959eae522a35835 317 Pfam PF12833 Helix-turn-helix domain 235 313 8.1E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1388 2626b3788e8d4dc3a959eae522a35835 317 Gene3D G3DSA:1.10.10.60 214 317 9.8E-24 T 12-10-2018 PA257_1388 2626b3788e8d4dc3a959eae522a35835 317 Pfam PF01965 DJ-1/PfpI family 5 173 7.2E-10 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_1388 2626b3788e8d4dc3a959eae522a35835 317 SUPERFAMILY SSF46689 212 263 2.51E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1388 2626b3788e8d4dc3a959eae522a35835 317 SUPERFAMILY SSF46689 266 315 6.45E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2906 96ca0f02d4c39f85fd34a4eba74f756e 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 339 358 2.0E-36 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2906 96ca0f02d4c39f85fd34a4eba74f756e 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 2.0E-36 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2906 96ca0f02d4c39f85fd34a4eba74f756e 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 2.0E-36 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2906 96ca0f02d4c39f85fd34a4eba74f756e 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 176 200 2.0E-36 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2906 96ca0f02d4c39f85fd34a4eba74f756e 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 391 417 2.0E-36 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2906 96ca0f02d4c39f85fd34a4eba74f756e 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 497 4.7E-176 T 12-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2906 96ca0f02d4c39f85fd34a4eba74f756e 509 Pfam PF00361 Proton-conducting membrane transporter 134 433 2.9E-72 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_5556 97841df385788d0ea24e22167ffcb1b4 263 PIRSF PIRSF012281 1 262 2.5E-130 T 12-10-2018 IPR012039 Uncharacterised conserved protein UCP012281 PA257_5556 97841df385788d0ea24e22167ffcb1b4 263 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 193 248 1.2E-21 T 12-10-2018 IPR019220 Domain of unknown function DUF2135 PA257_5556 97841df385788d0ea24e22167ffcb1b4 263 Gene3D G3DSA:2.60.120.380 115 217 9.5E-6 T 12-10-2018 PA257_3426 89762849135676b894552562f61abe87 284 SUPERFAMILY SSF46689 4 111 9.14E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3426 89762849135676b894552562f61abe87 284 Pfam PF13565 Homeodomain-like domain 36 109 1.7E-11 T 12-10-2018 PA257_4991 62ab3c93ded0b3f94e008e91f853a0f6 312 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 46.615 T 12-10-2018 IPR020936 Uncharacterised protein family UPF0176 PA257_4991 62ab3c93ded0b3f94e008e91f853a0f6 312 SMART SM00450 113 214 1.9E-15 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_4991 62ab3c93ded0b3f94e008e91f853a0f6 312 Gene3D G3DSA:3.30.70.100 1 96 1.3E-35 T 12-10-2018 PA257_4991 62ab3c93ded0b3f94e008e91f853a0f6 312 Gene3D G3DSA:3.40.250.10 97 249 5.5E-49 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_4991 62ab3c93ded0b3f94e008e91f853a0f6 312 SUPERFAMILY SSF52821 90 225 6.72E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_4991 62ab3c93ded0b3f94e008e91f853a0f6 312 Pfam PF00581 Rhodanese-like domain 115 210 5.4E-7 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_6973 fe36e97abae377cffa1d31616724ede0 455 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 455 3.3E-103 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 286 304 5.2E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 5.2E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 Gene3D G3DSA:3.40.50.300 217 383 6.0E-103 T 12-10-2018 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 217 367 5.1E-20 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 455 32.863 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 Gene3D G3DSA:1.20.120.430 122 455 6.0E-103 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 SUPERFAMILY SSF116878 121 455 1.96E-50 T 12-10-2018 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 Gene3D G3DSA:3.30.1360.120 1 121 3.1E-40 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 Pfam PF01926 50S ribosome-binding GTPase 219 307 4.6E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 Pfam PF12631 MnmE helical domain 123 452 6.7E-59 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 2.5E-36 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 PA257_6973 fe36e97abae377cffa1d31616724ede0 455 SUPERFAMILY SSF52540 73 373 8.76E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1834 bfdc28d6d607697c291964653a79df4a 186 SUPERFAMILY SSF55620 5 183 8.89E-79 T 12-10-2018 PA257_1834 bfdc28d6d607697c291964653a79df4a 186 Gene3D G3DSA:1.10.286.10 2 52 2.8E-21 T 12-10-2018 PA257_1834 bfdc28d6d607697c291964653a79df4a 186 Pfam PF01227 GTP cyclohydrolase I 6 182 6.4E-76 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PA257_1834 bfdc28d6d607697c291964653a79df4a 186 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 183 39.246 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PA257_1834 bfdc28d6d607697c291964653a79df4a 186 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 6 183 1.4E-77 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PA257_1834 bfdc28d6d607697c291964653a79df4a 186 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 110 120 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PA257_1834 bfdc28d6d607697c291964653a79df4a 186 Gene3D G3DSA:3.30.1130.10 53 186 5.0E-63 T 12-10-2018 PA257_1834 bfdc28d6d607697c291964653a79df4a 186 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PA257_6562 370b962e6003c2de75ba61b0c19a555b 594 SUPERFAMILY SSF52540 199 588 4.86E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6562 370b962e6003c2de75ba61b0c19a555b 594 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 69 167 1.9E-15 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal PA257_6562 370b962e6003c2de75ba61b0c19a555b 594 Gene3D G3DSA:3.30.450.90 186 313 6.0E-42 T 12-10-2018 PA257_6562 370b962e6003c2de75ba61b0c19a555b 594 Pfam PF00437 Type II/IV secretion system protein 220 480 2.8E-76 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_6562 370b962e6003c2de75ba61b0c19a555b 594 SMART SM00382 341 464 1.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6562 370b962e6003c2de75ba61b0c19a555b 594 SUPERFAMILY SSF160246 16 160 9.15E-12 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily PA257_6562 370b962e6003c2de75ba61b0c19a555b 594 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 408 422 - T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_6562 370b962e6003c2de75ba61b0c19a555b 594 Gene3D G3DSA:3.40.50.300 317 594 2.1E-103 T 12-10-2018 PA257_3334 74de4735f9cd4b9e52febcb95c9734e8 295 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 17 288 5.7E-66 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 PA257_3334 74de4735f9cd4b9e52febcb95c9734e8 295 SUPERFAMILY SSF51197 15 295 7.78E-88 T 12-10-2018 PA257_3334 74de4735f9cd4b9e52febcb95c9734e8 295 Gene3D G3DSA:3.60.130.10 14 295 4.7E-87 T 12-10-2018 PA257_3352 99e5dc6ca1d0668add1761584bfc47a7 452 Gene3D G3DSA:2.40.160.180 33 452 4.0E-168 T 12-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily PA257_3352 99e5dc6ca1d0668add1761584bfc47a7 452 Pfam PF04966 Carbohydrate-selective porin, OprB family 78 452 1.7E-119 T 12-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 PA257_0268 6b719e94ed2d3f596f6448ce1cf5a785 441 SUPERFAMILY SSF103473 25 438 8.24E-74 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0268 6b719e94ed2d3f596f6448ce1cf5a785 441 Gene3D G3DSA:1.20.1250.20 26 438 7.3E-68 T 12-10-2018 PA257_0268 6b719e94ed2d3f596f6448ce1cf5a785 441 Pfam PF07690 Major Facilitator Superfamily 40 397 1.7E-51 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6570 334e35cad61b29513441fbd25da3c8dd 304 Gene3D G3DSA:3.40.190.10 167 271 1.5E-52 T 12-10-2018 PA257_6570 334e35cad61b29513441fbd25da3c8dd 304 SUPERFAMILY SSF53850 88 295 8.54E-37 T 12-10-2018 PA257_6570 334e35cad61b29513441fbd25da3c8dd 304 Gene3D G3DSA:1.10.10.10 2 94 2.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6570 334e35cad61b29513441fbd25da3c8dd 304 SUPERFAMILY SSF46785 2 87 3.46E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6570 334e35cad61b29513441fbd25da3c8dd 304 Pfam PF03466 LysR substrate binding domain 88 292 2.6E-41 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6570 334e35cad61b29513441fbd25da3c8dd 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.1E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6570 334e35cad61b29513441fbd25da3c8dd 304 Gene3D G3DSA:3.40.190.10 95 291 1.5E-52 T 12-10-2018 PA257_6570 334e35cad61b29513441fbd25da3c8dd 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6570 334e35cad61b29513441fbd25da3c8dd 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6570 334e35cad61b29513441fbd25da3c8dd 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2551 d3abe99a136073ecc26ee1d04509f2d2 98 Pfam PF13683 Integrase core domain 7 73 2.2E-31 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_2551 d3abe99a136073ecc26ee1d04509f2d2 98 SUPERFAMILY SSF53098 2 76 7.13E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_2551 d3abe99a136073ecc26ee1d04509f2d2 98 Gene3D G3DSA:3.30.420.10 1 67 6.6E-6 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_1491 0ed3830598b9a7f385d5e8f9b542ea47 688 SUPERFAMILY SSF117892 60 208 2.75E-9 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily PA257_1695 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 51 75 1.1E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1695 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 154 172 1.1E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1695 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 187 209 1.1E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1695 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 12 31 1.1E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1695 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 237 257 1.1E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1695 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 88 107 1.1E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1695 804d987aec6e423920bf04a6f666297a 279 SUPERFAMILY SSF81338 10 260 5.49E-78 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PA257_1695 804d987aec6e423920bf04a6f666297a 279 Gene3D G3DSA:1.20.1080.10 5 262 8.8E-102 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PA257_1695 804d987aec6e423920bf04a6f666297a 279 Pfam PF00230 Major intrinsic protein 9 251 9.6E-66 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_1695 804d987aec6e423920bf04a6f666297a 279 ProSitePatterns PS00221 MIP family signature. 69 77 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 PA257_1695 804d987aec6e423920bf04a6f666297a 279 TIGRFAM TIGR00861 MIP: MIP family channel proteins 16 252 6.4E-68 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PA257_4334 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 SUPERFAMILY SSF52172 3 109 3.27E-28 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4334 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 Pfam PF00072 Response regulator receiver domain 5 109 6.7E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4334 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 PIRSF PIRSF000876 1 368 5.6E-131 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_4334 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 Pfam PF01339 CheB methylesterase 187 363 3.4E-57 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_4334 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 368 39.478 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_4334 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 SMART SM00448 3 122 2.2E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4334 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 Gene3D G3DSA:3.40.50.2300 2 138 1.7E-31 T 12-10-2018 PA257_4334 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 SUPERFAMILY SSF52738 182 367 4.32E-64 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal PA257_4334 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 Gene3D G3DSA:3.40.50.180 179 366 5.1E-65 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal PA257_1670 97f2eabbbc87fc447916a662505090eb 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 3.8E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1670 97f2eabbbc87fc447916a662505090eb 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1670 97f2eabbbc87fc447916a662505090eb 217 Pfam PF00072 Response regulator receiver domain 6 120 8.0E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1670 97f2eabbbc87fc447916a662505090eb 217 SMART SM00421 150 207 1.1E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1670 97f2eabbbc87fc447916a662505090eb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 4.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1670 97f2eabbbc87fc447916a662505090eb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 4.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1670 97f2eabbbc87fc447916a662505090eb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 4.5E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_1670 97f2eabbbc87fc447916a662505090eb 217 Gene3D G3DSA:3.40.50.12740 5 212 1.2E-51 T 12-10-2018 PA257_1670 97f2eabbbc87fc447916a662505090eb 217 SMART SM00448 4 119 2.2E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1670 97f2eabbbc87fc447916a662505090eb 217 SUPERFAMILY SSF52172 3 180 5.69E-26 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 41.112 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 Pfam PF00303 Thymidylate synthase 2 264 2.9E-125 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 5.7E-96 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 4.2E-41 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 Gene3D G3DSA:3.30.572.10 1 264 5.7E-132 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 4.1E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 4.1E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 4.1E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 4.1E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 4.1E-47 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_0415 fd96206007cd8bbba58d2a1833eb02c9 264 SUPERFAMILY SSF55831 1 264 8.9E-131 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PA257_5811 168dc4bdcaee379ec0522c16a7d4162c 332 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 260 266 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_5811 168dc4bdcaee379ec0522c16a7d4162c 332 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 331 41.167 T 12-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 PA257_5811 168dc4bdcaee379ec0522c16a7d4162c 332 Pfam PF05175 Methyltransferase small domain 161 327 6.7E-54 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PA257_5811 168dc4bdcaee379ec0522c16a7d4162c 332 Pfam PF08468 Methyltransferase small domain N-terminal 5 153 2.6E-39 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 PA257_5811 168dc4bdcaee379ec0522c16a7d4162c 332 Gene3D G3DSA:3.40.50.150 1 146 3.4E-33 T 12-10-2018 PA257_5811 168dc4bdcaee379ec0522c16a7d4162c 332 SUPERFAMILY SSF53335 93 306 3.19E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5811 168dc4bdcaee379ec0522c16a7d4162c 332 Gene3D G3DSA:3.40.50.150 148 332 7.3E-44 T 12-10-2018 PA257_2921 23c386e72bf88d768b21d31081ac26e1 531 SUPERFAMILY SSF51621 10 514 2.42E-124 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_2921 23c386e72bf88d768b21d31081ac26e1 531 Pfam PF00463 Isocitrate lyase family 429 530 2.6E-13 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 PA257_2921 23c386e72bf88d768b21d31081ac26e1 531 Pfam PF00463 Isocitrate lyase family 81 269 3.2E-20 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 PA257_2921 23c386e72bf88d768b21d31081ac26e1 531 Pfam PF00463 Isocitrate lyase family 330 399 1.3E-9 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 PA257_2921 23c386e72bf88d768b21d31081ac26e1 531 Gene3D G3DSA:3.20.20.60 411 531 1.0E-20 T 12-10-2018 PA257_2921 23c386e72bf88d768b21d31081ac26e1 531 PIRSF PIRSF001362 290 410 6.6E-12 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 PA257_2921 23c386e72bf88d768b21d31081ac26e1 531 PIRSF PIRSF001362 1 278 6.0E-29 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 PA257_2921 23c386e72bf88d768b21d31081ac26e1 531 PIRSF PIRSF001362 412 531 5.1E-8 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 PA257_5970 e6b8616b2d5c6e134a441db2369a2381 104 SUPERFAMILY SSF75471 1 96 9.55E-28 T 12-10-2018 IPR035920 YhbY-like superfamily PA257_5970 e6b8616b2d5c6e134a441db2369a2381 104 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 2.7E-18 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 PA257_5970 e6b8616b2d5c6e134a441db2369a2381 104 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 2.4E-23 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 PA257_5970 e6b8616b2d5c6e134a441db2369a2381 104 Gene3D G3DSA:3.30.110.60 1 101 3.9E-31 T 12-10-2018 IPR035920 YhbY-like superfamily PA257_5970 e6b8616b2d5c6e134a441db2369a2381 104 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 93 2.0E-41 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 PA257_5970 e6b8616b2d5c6e134a441db2369a2381 104 SMART SM01103 3 86 1.6E-38 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 PA257_4708 93885bd433c6496b785aecf8bd467faa 237 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 236 3.5E-73 T 12-10-2018 IPR010239 Conserved hypothetical protein CHP02001 PA257_4708 93885bd433c6496b785aecf8bd467faa 237 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 55 224 6.9E-14 T 12-10-2018 IPR010239 Conserved hypothetical protein CHP02001 PA257_5113 98db2ae2f8984adb73757a6081a7c98d 395 Pfam PF04303 PrpF protein 6 391 4.5E-185 T 12-10-2018 IPR007400 PrpF protein PA257_5113 98db2ae2f8984adb73757a6081a7c98d 395 SUPERFAMILY SSF54506 3 181 3.61E-68 T 12-10-2018 PA257_5113 98db2ae2f8984adb73757a6081a7c98d 395 SUPERFAMILY SSF54506 189 393 8.63E-79 T 12-10-2018 PA257_5113 98db2ae2f8984adb73757a6081a7c98d 395 Gene3D G3DSA:3.10.310.10 181 374 3.4E-148 T 12-10-2018 PA257_5113 98db2ae2f8984adb73757a6081a7c98d 395 Gene3D G3DSA:3.10.310.10 11 388 3.4E-148 T 12-10-2018 PA257_5113 98db2ae2f8984adb73757a6081a7c98d 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 395 3.1E-237 T 12-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 PA257_2980 f83ae290afd313d07db13fddc784866c 177 Pfam PF04352 ProQ/FINO family 40 146 5.8E-32 T 12-10-2018 IPR016103 ProQ/FinO domain PA257_2980 f83ae290afd313d07db13fddc784866c 177 SUPERFAMILY SSF48657 5 148 3.66E-37 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily PA257_2980 f83ae290afd313d07db13fddc784866c 177 Gene3D G3DSA:1.10.1710.10 4 172 6.8E-19 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily PA257_2980 f83ae290afd313d07db13fddc784866c 177 SMART SM00945 36 150 1.2E-43 T 12-10-2018 IPR016103 ProQ/FinO domain PA257_1466 3d5e9d4ff5ce9885d86523dd91e405ba 64 Pfam PF06945 Protein of unknown function (DUF1289) 8 53 8.0E-19 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 PA257_4040 d5d9125be4926c9ac7d8703ded1ebcf3 273 SUPERFAMILY SSF46626 163 269 1.78E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4040 d5d9125be4926c9ac7d8703ded1ebcf3 273 Gene3D G3DSA:1.10.760.10 153 268 5.7E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4040 d5d9125be4926c9ac7d8703ded1ebcf3 273 Pfam PF00034 Cytochrome c 181 264 5.2E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3493 1c9200e8f8e5cc7899b22760cc199b7a 461 SUPERFAMILY SSF51905 2 349 1.05E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3493 1c9200e8f8e5cc7899b22760cc199b7a 461 Gene3D G3DSA:3.50.50.60 261 387 3.1E-5 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3493 1c9200e8f8e5cc7899b22760cc199b7a 461 Gene3D G3DSA:3.50.50.60 1 212 2.8E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3493 1c9200e8f8e5cc7899b22760cc199b7a 461 Pfam PF00743 Flavin-binding monooxygenase-like 38 306 9.1E-13 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 PA257_0933 630fd33e140ab7b2f23c3480a3d3e696 340 Pfam PF01032 FecCD transport family 22 334 4.2E-84 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PA257_0933 630fd33e140ab7b2f23c3480a3d3e696 340 Gene3D G3DSA:1.10.3470.10 8 338 1.0E-86 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_0933 630fd33e140ab7b2f23c3480a3d3e696 340 SUPERFAMILY SSF81345 5 334 7.19E-75 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_2478 24d96df789cdb3dc10b6f51f97c41b35 256 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 255 6.6E-50 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PA257_2478 24d96df789cdb3dc10b6f51f97c41b35 256 Gene3D G3DSA:3.40.830.10 1 256 1.4E-89 T 12-10-2018 PA257_2478 24d96df789cdb3dc10b6f51f97c41b35 256 SUPERFAMILY SSF53213 1 256 2.62E-93 T 12-10-2018 PA257_2478 24d96df789cdb3dc10b6f51f97c41b35 256 PIRSF PIRSF006157 1 256 1.6E-92 T 12-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 PA257_0698 4a1888f4f59c5cebc243ab1d0d538d93 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 6.1E-92 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PA257_0698 4a1888f4f59c5cebc243ab1d0d538d93 354 PIRSF PIRSF001359 1 329 1.4E-83 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PA257_0698 4a1888f4f59c5cebc243ab1d0d538d93 354 SUPERFAMILY SSF51569 3 328 7.77E-107 T 12-10-2018 PA257_0698 4a1888f4f59c5cebc243ab1d0d538d93 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PA257_0698 4a1888f4f59c5cebc243ab1d0d538d93 354 Gene3D G3DSA:3.20.20.70 1 354 5.5E-154 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0698 4a1888f4f59c5cebc243ab1d0d538d93 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PA257_0698 4a1888f4f59c5cebc243ab1d0d538d93 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 8.2E-98 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PA257_0698 4a1888f4f59c5cebc243ab1d0d538d93 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 7.1E-217 T 12-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 PA257_4695 e9e55b841622e6f87f6522b8b3ba58ed 279 SMART SM00316 71 133 6.9 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_4695 e9e55b841622e6f87f6522b8b3ba58ed 279 SMART SM00316 146 208 0.87 T 12-10-2018 IPR022967 RNA-binding domain, S1 PA257_4695 e9e55b841622e6f87f6522b8b3ba58ed 279 PIRSF PIRSF012524 1 279 6.5E-104 T 12-10-2018 IPR014464 Conserved virulence factor B PA257_4695 e9e55b841622e6f87f6522b8b3ba58ed 279 Gene3D G3DSA:1.10.10.10 217 277 5.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4695 e9e55b841622e6f87f6522b8b3ba58ed 279 Pfam PF13509 S1 domain 4 66 2.3E-22 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain PA257_4695 e9e55b841622e6f87f6522b8b3ba58ed 279 Pfam PF13509 S1 domain 73 131 3.6E-9 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain PA257_4695 e9e55b841622e6f87f6522b8b3ba58ed 279 Gene3D G3DSA:2.40.50.140 142 214 2.3E-5 T 12-10-2018 PA257_0079 6d9d28f719c1ce00ebf6272ed2bc9d53 77 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 74 3.0E-29 T 12-10-2018 IPR010595 Protein of unknown function DUF1161 PA257_0079 6d9d28f719c1ce00ebf6272ed2bc9d53 77 Pfam PF06649 Protein of unknown function (DUF1161) 24 74 8.9E-25 T 12-10-2018 IPR010595 Protein of unknown function DUF1161 PA257_6675 b69749103bfb67bb845d91e3afeaee2a 661 ProSitePatterns PS01303 BCCT family of transporters signature. 315 324 - T 12-10-2018 IPR018093 BCCT transporter, conserved site PA257_6675 b69749103bfb67bb845d91e3afeaee2a 661 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 15 496 4.0E-200 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 PA257_6675 b69749103bfb67bb845d91e3afeaee2a 661 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 53 497 2.3E-163 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 PA257_2838 20840bd263c9a6bb01631b8936d4a733 204 Pfam PF01810 LysE type translocator 15 203 1.8E-31 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_2838 20840bd263c9a6bb01631b8936d4a733 204 PIRSF PIRSF006324 1 204 1.8E-53 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_5017 4a00a29a52483e3ff343cafba29b6595 304 SUPERFAMILY SSF69593 39 288 2.62E-36 T 12-10-2018 PA257_5017 4a00a29a52483e3ff343cafba29b6595 304 SMART SM00563 89 231 1.2E-15 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_5017 4a00a29a52483e3ff343cafba29b6595 304 Pfam PF01553 Acyltransferase 76 221 3.1E-14 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_6904 45f94421b1599785156c0c193397700a 335 SUPERFAMILY SSF55021 262 334 9.27E-17 T 12-10-2018 PA257_6904 45f94421b1599785156c0c193397700a 335 Pfam PF00005 ABC transporter 22 170 6.9E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6904 45f94421b1599785156c0c193397700a 335 Pfam PF09383 NIL domain 264 333 5.2E-19 T 12-10-2018 IPR018449 NIL domain PA257_6904 45f94421b1599785156c0c193397700a 335 Gene3D G3DSA:3.30.70.260 247 335 2.2E-15 T 12-10-2018 PA257_6904 45f94421b1599785156c0c193397700a 335 Gene3D G3DSA:3.40.50.300 1 246 8.2E-77 T 12-10-2018 PA257_6904 45f94421b1599785156c0c193397700a 335 SMART SM00930 261 334 8.6E-25 T 12-10-2018 IPR018449 NIL domain PA257_6904 45f94421b1599785156c0c193397700a 335 SUPERFAMILY SSF52540 1 241 6.81E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6904 45f94421b1599785156c0c193397700a 335 SMART SM00382 30 219 2.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6904 45f94421b1599785156c0c193397700a 335 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6069 0f62a11c5d89843754a93b7f7c170d76 242 Pfam PF04229 GrpB protein 22 182 6.7E-49 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase PA257_6069 0f62a11c5d89843754a93b7f7c170d76 242 SUPERFAMILY SSF81301 24 186 5.89E-46 T 12-10-2018 PA257_6069 0f62a11c5d89843754a93b7f7c170d76 242 Gene3D G3DSA:3.30.460.10 17 189 1.4E-49 T 12-10-2018 PA257_4486 6cf25dbc6ec4a2c6ab97487d1da46305 275 Gene3D G3DSA:3.40.50.1000 11 272 6.2E-99 T 12-10-2018 IPR023214 HAD superfamily PA257_4486 6cf25dbc6ec4a2c6ab97487d1da46305 275 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 206 2.3E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_4486 6cf25dbc6ec4a2c6ab97487d1da46305 275 SUPERFAMILY SSF56784 10 262 6.12E-57 T 12-10-2018 IPR036412 HAD-like superfamily PA257_4486 6cf25dbc6ec4a2c6ab97487d1da46305 275 Pfam PF00702 haloacid dehalogenase-like hydrolase 13 201 3.3E-7 T 12-10-2018 PA257_4486 6cf25dbc6ec4a2c6ab97487d1da46305 275 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 9 259 5.3E-113 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 PA257_4486 6cf25dbc6ec4a2c6ab97487d1da46305 275 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 275 142.063 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 PA257_4486 6cf25dbc6ec4a2c6ab97487d1da46305 275 Gene3D G3DSA:1.10.150.240 27 104 6.2E-99 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PA257_6384 96ef8a4202aa4765628a353ca10a738e 503 Gene3D G3DSA:1.10.275.10 2 190 1.0E-51 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal PA257_6384 96ef8a4202aa4765628a353ca10a738e 503 Gene3D G3DSA:1.20.200.10 191 495 1.4E-107 T 12-10-2018 PA257_6384 96ef8a4202aa4765628a353ca10a738e 503 SUPERFAMILY SSF48557 2 487 7.06E-162 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 PA257_6384 96ef8a4202aa4765628a353ca10a738e 503 Pfam PF00221 Aromatic amino acid lyase 7 463 1.3E-160 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 PA257_3484 5bc5a9cc290bf27c4f8c590fdaf3ead4 288 Gene3D G3DSA:2.60.120.620 12 288 6.3E-102 T 12-10-2018 PA257_3484 5bc5a9cc290bf27c4f8c590fdaf3ead4 288 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 27 224 7.0E-40 T 12-10-2018 IPR008775 Phytanoyl-CoA dioxygenase PA257_3484 5bc5a9cc290bf27c4f8c590fdaf3ead4 288 SUPERFAMILY SSF51197 28 268 6.13E-43 T 12-10-2018 PA257_6109 c9fc55ea0817264ae5802f2e15ddc23f 433 PIRSF PIRSF029692 5 433 1.2E-192 T 12-10-2018 IPR016935 Staphylopine dehydrogenase PA257_6109 c9fc55ea0817264ae5802f2e15ddc23f 433 SUPERFAMILY SSF51735 10 129 7.88E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6109 c9fc55ea0817264ae5802f2e15ddc23f 433 Pfam PF10100 Staphylopine dehydrogenase 10 429 3.2E-170 T 12-10-2018 IPR016935 Staphylopine dehydrogenase PA257_5916 547d6eb5ba4b95e2ddf3396a56f4c559 265 SUPERFAMILY SSF51206 151 259 3.4E-28 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like PA257_5916 547d6eb5ba4b95e2ddf3396a56f4c559 265 Gene3D G3DSA:2.60.120.10 143 263 1.1E-28 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_5916 547d6eb5ba4b95e2ddf3396a56f4c559 265 SMART SM00100 128 246 6.7E-19 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_5916 547d6eb5ba4b95e2ddf3396a56f4c559 265 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 160 176 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site PA257_5916 547d6eb5ba4b95e2ddf3396a56f4c559 265 PRINTS PR00103 cAMP-dependent protein kinase signature 194 203 1.8E-6 T 12-10-2018 PA257_5916 547d6eb5ba4b95e2ddf3396a56f4c559 265 PRINTS PR00103 cAMP-dependent protein kinase signature 169 183 1.8E-6 T 12-10-2018 PA257_5916 547d6eb5ba4b95e2ddf3396a56f4c559 265 PRINTS PR00103 cAMP-dependent protein kinase signature 154 168 1.8E-6 T 12-10-2018 PA257_5916 547d6eb5ba4b95e2ddf3396a56f4c559 265 PRINTS PR00103 cAMP-dependent protein kinase signature 206 217 1.8E-6 T 12-10-2018 PA257_5916 547d6eb5ba4b95e2ddf3396a56f4c559 265 Pfam PF00027 Cyclic nucleotide-binding domain 152 234 1.1E-21 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_3730 b3c9f2aa649ae04f7fe72f64f1bea20d 432 Pfam PF04209 homogentisate 1,2-dioxygenase 9 427 7.4E-213 T 12-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 PA257_3730 b3c9f2aa649ae04f7fe72f64f1bea20d 432 Gene3D G3DSA:2.60.120.10 272 398 2.9E-63 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_3730 b3c9f2aa649ae04f7fe72f64f1bea20d 432 SUPERFAMILY SSF51182 8 431 6.52E-160 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_3730 b3c9f2aa649ae04f7fe72f64f1bea20d 432 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 8 426 2.5E-196 T 12-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 PA257_3730 b3c9f2aa649ae04f7fe72f64f1bea20d 432 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 9 429 70.722 T 12-10-2018 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 23 129 5.9E-22 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 SMART SM00839 138 339 1.9E-66 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 SUPERFAMILY SSF51735 138 335 4.33E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 Gene3D G3DSA:3.40.50.720 132 330 2.3E-128 T 12-10-2018 PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 Gene3D G3DSA:3.40.50.10860 11 336 2.3E-128 T 12-10-2018 PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 214 290 1.0E-8 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 64 78 2.0E-11 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 280 291 2.0E-11 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 170 190 2.0E-11 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 PIRSF PIRSF000188 1 341 1.7E-141 T 12-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 PA257_1853 57dada7d741f4d4a5e5d7f1f047aad74 341 SUPERFAMILY SSF53223 2 134 7.68E-41 T 12-10-2018 PA257_0559 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 SMART SM00867 25 189 1.3E-71 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PA257_0559 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 Pfam PF04264 YceI-like domain 26 186 1.9E-41 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PA257_0559 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 Gene3D G3DSA:2.40.128.110 24 191 4.5E-57 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PA257_0559 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 Hamap MF_00780 Protein YceI [yceI]. 2 191 45.339 T 12-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI PA257_0559 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 SUPERFAMILY SSF101874 22 191 2.88E-56 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 SUPERFAMILY SSF46689 217 264 2.91E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 258 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 Gene3D G3DSA:1.10.10.60 223 267 7.1E-15 T 12-10-2018 PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 Pfam PF02311 AraC-like ligand binding domain 13 142 5.1E-25 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 Gene3D G3DSA:1.10.10.60 165 222 5.2E-12 T 12-10-2018 PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 231 246 3.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 262 3.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 SMART SM00342 180 262 8.8E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 SUPERFAMILY SSF46689 167 214 8.06E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 Gene3D G3DSA:2.60.120.10 14 86 4.8E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 SUPERFAMILY SSF51215 22 146 1.83E-16 T 12-10-2018 IPR037923 Transcription regulator HTH-like PA257_6727 083bdf747e187c0015aa4344c5e297ce 267 Pfam PF12833 Helix-turn-helix domain 186 263 3.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4433 068f67181de1891037db40307215bd87 132 PIRSF PIRSF500687 1 132 4.4E-64 T 12-10-2018 IPR027259 Predicted 3-demethylubiquinone-9 3-methyltransferase, bacterial PA257_4433 068f67181de1891037db40307215bd87 132 Gene3D G3DSA:3.30.720.110 73 132 5.9E-32 T 12-10-2018 PA257_4433 068f67181de1891037db40307215bd87 132 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 129 7.9E-32 T 12-10-2018 IPR028973 PhnB-like PA257_4433 068f67181de1891037db40307215bd87 132 SUPERFAMILY SSF54593 2 130 3.76E-40 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4433 068f67181de1891037db40307215bd87 132 PIRSF PIRSF021700 1 132 1.6E-41 T 12-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase PA257_4433 068f67181de1891037db40307215bd87 132 Gene3D G3DSA:3.30.720.100 7 72 1.4E-30 T 12-10-2018 PA257_3954 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Gene3D G3DSA:3.10.50.40 255 390 1.6E-36 T 12-10-2018 PA257_3954 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Pfam PF13616 PPIC-type PPIASE domain 261 360 1.7E-28 T 12-10-2018 PA257_3954 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Pfam PF13624 SurA N-terminal domain 1 164 2.4E-44 T 12-10-2018 PA257_3954 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 SUPERFAMILY SSF109998 40 236 6.41E-32 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily PA257_3954 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Gene3D G3DSA:1.10.4030.30 42 188 7.4E-15 T 12-10-2018 PA257_3954 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 SUPERFAMILY SSF54534 262 362 2.42E-32 T 12-10-2018 PA257_3954 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 300 321 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 PA257_2286 9601a574169072103f80d7c4f1450863 145 SUPERFAMILY SSF52402 3 141 1.93E-36 T 12-10-2018 PA257_2286 9601a574169072103f80d7c4f1450863 145 PRINTS PR01438 Universal stress protein signature 119 141 4.6E-14 T 12-10-2018 IPR006015 Universal stress protein A PA257_2286 9601a574169072103f80d7c4f1450863 145 PRINTS PR01438 Universal stress protein signature 3 21 4.6E-14 T 12-10-2018 IPR006015 Universal stress protein A PA257_2286 9601a574169072103f80d7c4f1450863 145 PRINTS PR01438 Universal stress protein signature 102 114 4.6E-14 T 12-10-2018 IPR006015 Universal stress protein A PA257_2286 9601a574169072103f80d7c4f1450863 145 PIRSF PIRSF006276 1 144 1.6E-48 T 12-10-2018 IPR006015 Universal stress protein A PA257_2286 9601a574169072103f80d7c4f1450863 145 Pfam PF00582 Universal stress protein family 3 141 1.3E-33 T 12-10-2018 IPR006016 UspA PA257_2286 9601a574169072103f80d7c4f1450863 145 Gene3D G3DSA:3.40.50.620 3 144 8.2E-41 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2423 b5e9f13748840b414dfc2edb19aa943e 292 Gene3D G3DSA:3.40.50.720 2 264 2.0E-75 T 12-10-2018 PA257_2423 b5e9f13748840b414dfc2edb19aa943e 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2423 b5e9f13748840b414dfc2edb19aa943e 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2423 b5e9f13748840b414dfc2edb19aa943e 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 2.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2423 b5e9f13748840b414dfc2edb19aa943e 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 2.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2423 b5e9f13748840b414dfc2edb19aa943e 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2423 b5e9f13748840b414dfc2edb19aa943e 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.6E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2423 b5e9f13748840b414dfc2edb19aa943e 292 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 197 0.0012 T 12-10-2018 PA257_2423 b5e9f13748840b414dfc2edb19aa943e 292 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 253 9.0E-54 T 12-10-2018 PA257_2423 b5e9f13748840b414dfc2edb19aa943e 292 SUPERFAMILY SSF51735 13 254 3.34E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0053 b375b74436f2e2029ac5961ff3e6d702 206 Pfam PF01797 Transposase IS200 like 5 99 5.6E-13 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PA257_0053 b375b74436f2e2029ac5961ff3e6d702 206 SUPERFAMILY SSF143422 3 104 4.58E-24 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 PA257_0053 b375b74436f2e2029ac5961ff3e6d702 206 Gene3D G3DSA:3.30.70.1290 1 136 1.7E-34 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 PA257_0053 b375b74436f2e2029ac5961ff3e6d702 206 SMART SM01321 2 101 1.4E-28 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PA257_1658 c3dbacb0f173829f9b445da10b09f167 153 Hamap MF_01114 Regulatory protein RecX [recX]. 6 153 13.75 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 PA257_1658 c3dbacb0f173829f9b445da10b09f167 153 Gene3D G3DSA:1.10.10.10 57 101 1.6E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1658 c3dbacb0f173829f9b445da10b09f167 153 Gene3D G3DSA:1.10.10.10 10 55 4.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1658 c3dbacb0f173829f9b445da10b09f167 153 Pfam PF02631 RecX family 33 148 6.3E-32 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 PA257_1658 c3dbacb0f173829f9b445da10b09f167 153 Gene3D G3DSA:1.10.10.10 103 152 8.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4019 3538cf533c1251bdad3bcc2232f03a2b 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 7.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4019 3538cf533c1251bdad3bcc2232f03a2b 324 Gene3D G3DSA:1.10.10.10 1 86 1.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4019 3538cf533c1251bdad3bcc2232f03a2b 324 SUPERFAMILY SSF46785 1 112 6.01E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4019 3538cf533c1251bdad3bcc2232f03a2b 324 Pfam PF03466 LysR substrate binding domain 89 264 9.5E-39 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4019 3538cf533c1251bdad3bcc2232f03a2b 324 SUPERFAMILY SSF53850 90 321 7.7E-42 T 12-10-2018 PA257_4019 3538cf533c1251bdad3bcc2232f03a2b 324 Gene3D G3DSA:3.40.190.10 167 267 2.3E-98 T 12-10-2018 PA257_4019 3538cf533c1251bdad3bcc2232f03a2b 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4019 3538cf533c1251bdad3bcc2232f03a2b 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4019 3538cf533c1251bdad3bcc2232f03a2b 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4019 3538cf533c1251bdad3bcc2232f03a2b 324 Gene3D G3DSA:3.40.190.10 92 303 2.3E-98 T 12-10-2018 PA257_5049 f8947e8dd2415eb0be994bd406bbd81d 203 Gene3D G3DSA:1.10.530.70 23 200 3.4E-21 T 12-10-2018 PA257_5049 f8947e8dd2415eb0be994bd406bbd81d 203 Pfam PF00182 Chitinase class I 89 162 6.4E-5 T 12-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 PA257_5049 f8947e8dd2415eb0be994bd406bbd81d 203 SUPERFAMILY SSF53955 7 202 8.72E-43 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_1357 d86db32bade4d3ae220a4ae78da5ac41 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 17 171 6.9E-30 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_1357 d86db32bade4d3ae220a4ae78da5ac41 173 SUPERFAMILY SSF47144 84 173 3.92E-23 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_1357 d86db32bade4d3ae220a4ae78da5ac41 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 4 172 22.047 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_1357 d86db32bade4d3ae220a4ae78da5ac41 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 89 164 3.5E-16 T 12-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_1357 d86db32bade4d3ae220a4ae78da5ac41 173 SMART SM00271 4 69 1.1E-7 T 12-10-2018 IPR001623 DnaJ domain PA257_1357 d86db32bade4d3ae220a4ae78da5ac41 173 SUPERFAMILY SSF46565 6 77 6.02E-17 T 12-10-2018 IPR036869 Chaperone J-domain superfamily PA257_1357 d86db32bade4d3ae220a4ae78da5ac41 173 Gene3D G3DSA:1.10.287.110 2 76 6.1E-19 T 12-10-2018 IPR036869 Chaperone J-domain superfamily PA257_1357 d86db32bade4d3ae220a4ae78da5ac41 173 Gene3D G3DSA:1.20.1280.20 85 173 8.4E-22 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 PA257_1357 d86db32bade4d3ae220a4ae78da5ac41 173 Pfam PF00226 DnaJ domain 19 73 5.5E-7 T 12-10-2018 IPR001623 DnaJ domain PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 SUPERFAMILY SSF46689 241 291 1.79E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 Pfam PF12833 Helix-turn-helix domain 210 289 1.1E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 SMART SM00342 204 287 8.7E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 2.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 2.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 Pfam PF02311 AraC-like ligand binding domain 37 174 3.7E-28 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 SUPERFAMILY SSF46689 193 236 1.08E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 SUPERFAMILY SSF51215 26 177 3.27E-32 T 12-10-2018 IPR037923 Transcription regulator HTH-like PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 Gene3D G3DSA:2.60.120.280 39 177 5.7E-10 T 12-10-2018 PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 Gene3D G3DSA:1.10.10.60 187 293 4.5E-26 T 12-10-2018 PA257_1710 58eaad8c31b81fcafdc1885c5e862666 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 241 283 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_2542 38f83163b7078907aab33611053cc1c7 120 Pfam PF12833 Helix-turn-helix domain 36 114 3.3E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2542 38f83163b7078907aab33611053cc1c7 120 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 82 97 1.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_2542 38f83163b7078907aab33611053cc1c7 120 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 97 113 1.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_2542 38f83163b7078907aab33611053cc1c7 120 SMART SM00342 30 113 8.1E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2542 38f83163b7078907aab33611053cc1c7 120 SUPERFAMILY SSF46689 66 115 2.12E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2542 38f83163b7078907aab33611053cc1c7 120 Gene3D G3DSA:1.10.10.60 9 119 2.7E-23 T 12-10-2018 PA257_1083 123abd61caec8e10874139fc2c9e2fd3 232 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 224 232 - T 12-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 PA257_1083 123abd61caec8e10874139fc2c9e2fd3 232 SUPERFAMILY SSF56925 28 232 3.14E-26 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PA257_1083 123abd61caec8e10874139fc2c9e2fd3 232 Pfam PF03922 OmpW family 28 232 1.2E-76 T 12-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 PA257_1083 123abd61caec8e10874139fc2c9e2fd3 232 Gene3D G3DSA:2.40.160.20 23 232 2.4E-78 T 12-10-2018 PA257_3284 95ff13e99b56a382c53ed858dd5a35a3 361 Gene3D G3DSA:1.10.10.60 267 345 2.4E-7 T 12-10-2018 PA257_3284 95ff13e99b56a382c53ed858dd5a35a3 361 SUPERFAMILY SSF46689 234 344 2.2E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3284 95ff13e99b56a382c53ed858dd5a35a3 361 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 107 122 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_3284 95ff13e99b56a382c53ed858dd5a35a3 361 Gene3D G3DSA:1.10.8.60 193 266 9.0E-22 T 12-10-2018 PA257_3284 95ff13e99b56a382c53ed858dd5a35a3 361 Pfam PF00158 Sigma-54 interaction domain 22 188 4.9E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_3284 95ff13e99b56a382c53ed858dd5a35a3 361 SMART SM00382 41 184 8.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3284 95ff13e99b56a382c53ed858dd5a35a3 361 Gene3D G3DSA:3.40.50.300 6 192 1.3E-65 T 12-10-2018 PA257_3284 95ff13e99b56a382c53ed858dd5a35a3 361 SUPERFAMILY SSF52540 22 262 5.81E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6017 175291866bb4984d294d09574dd84b61 99 Gene3D G3DSA:1.10.10.10 6 82 6.4E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6017 175291866bb4984d294d09574dd84b61 99 Pfam PF09339 IclR helix-turn-helix domain 9 59 6.9E-9 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_6017 175291866bb4984d294d09574dd84b61 99 SUPERFAMILY SSF46785 8 80 7.59E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5156 3b27edbaaed380e5c4f11a891bb6ee98 327 SUPERFAMILY SSF53850 61 277 2.76E-11 T 12-10-2018 PA257_5156 3b27edbaaed380e5c4f11a891bb6ee98 327 Gene3D G3DSA:3.40.190.150 31 318 9.5E-58 T 12-10-2018 PA257_5156 3b27edbaaed380e5c4f11a891bb6ee98 327 PIRSF PIRSF017082 1 327 3.4E-81 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 PA257_5156 3b27edbaaed380e5c4f11a891bb6ee98 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 324 2.2E-24 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 PA257_5156 3b27edbaaed380e5c4f11a891bb6ee98 327 Gene3D G3DSA:3.40.190.10 125 253 9.5E-58 T 12-10-2018 PA257_6542 6c31e3c6f4497ddc35e8eb7c0bd24f93 200 Gene3D G3DSA:3.40.109.10 1 196 5.1E-47 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_6542 6c31e3c6f4497ddc35e8eb7c0bd24f93 200 SUPERFAMILY SSF55469 1 195 2.88E-49 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_6542 6c31e3c6f4497ddc35e8eb7c0bd24f93 200 Pfam PF00881 Nitroreductase family 7 177 1.5E-33 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 PA257_5018 a2f08a9ab69a8b648ca91800100b106b 237 Gene3D G3DSA:3.30.1330.60 84 226 5.8E-50 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_5018 a2f08a9ab69a8b648ca91800100b106b 237 PRINTS PR01021 OMPA domain signature 166 182 8.5E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_5018 a2f08a9ab69a8b648ca91800100b106b 237 PRINTS PR01021 OMPA domain signature 121 143 8.5E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_5018 a2f08a9ab69a8b648ca91800100b106b 237 PRINTS PR01021 OMPA domain signature 151 166 8.5E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_5018 a2f08a9ab69a8b648ca91800100b106b 237 SUPERFAMILY SSF103088 108 223 6.67E-40 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_5018 a2f08a9ab69a8b648ca91800100b106b 237 Pfam PF13488 Glycine zipper 48 90 3.3E-8 T 12-10-2018 IPR039567 Glycine zipper domain PA257_5018 a2f08a9ab69a8b648ca91800100b106b 237 Pfam PF00691 OmpA family 120 215 1.5E-23 T 12-10-2018 IPR006665 OmpA-like domain PA257_1685 c0371ccee962fc494934480378784253 510 SUPERFAMILY SSF51735 9 188 3.54E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1685 c0371ccee962fc494934480378784253 510 SUPERFAMILY SSF48179 188 293 3.57E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_1685 c0371ccee962fc494934480378784253 510 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 286 6.3E-32 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_1685 c0371ccee962fc494934480378784253 510 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 415 498 1.9E-21 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_1685 c0371ccee962fc494934480378784253 510 SUPERFAMILY SSF48179 415 498 1.62E-20 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_1685 c0371ccee962fc494934480378784253 510 Gene3D G3DSA:3.40.50.720 5 191 1.7E-61 T 12-10-2018 PA257_1685 c0371ccee962fc494934480378784253 510 Gene3D G3DSA:3.30.750.190 292 412 1.5E-97 T 12-10-2018 PA257_1685 c0371ccee962fc494934480378784253 510 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 186 3.2E-57 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PA257_1685 c0371ccee962fc494934480378784253 510 Gene3D G3DSA:1.10.1040.50 192 495 1.5E-97 T 12-10-2018 PA257_1252 87233c6c348c8cbc3105ea9fcdaed09f 171 PIRSF PIRSF025550 1 171 2.5E-68 T 12-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT PA257_1252 87233c6c348c8cbc3105ea9fcdaed09f 171 Pfam PF02036 SCP-2 sterol transfer family 38 131 1.1E-14 T 12-10-2018 IPR003033 SCP2 sterol-binding domain PA257_1252 87233c6c348c8cbc3105ea9fcdaed09f 171 Gene3D G3DSA:3.30.1050.10 57 135 1.9E-5 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PA257_1252 87233c6c348c8cbc3105ea9fcdaed09f 171 SUPERFAMILY SSF55718 42 135 3.06E-17 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PA257_2472 a9d437859995dd3c79fc8603bd39414e 248 SUPERFAMILY SSF53335 4 196 1.13E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2472 a9d437859995dd3c79fc8603bd39414e 248 Pfam PF01564 Spermine/spermidine synthase domain 57 171 1.1E-5 T 12-10-2018 PA257_2472 a9d437859995dd3c79fc8603bd39414e 248 Gene3D G3DSA:3.40.50.150 11 233 8.8E-38 T 12-10-2018 PA257_5220 5ff3d669d6a1edb7f1efafcbcad416d0 136 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 14 129 2.6E-42 T 12-10-2018 IPR021877 Protein of unknown function DUF3487 PA257_5220 5ff3d669d6a1edb7f1efafcbcad416d0 136 Pfam PF11990 Protein of unknown function (DUF3487) 12 130 1.2E-41 T 12-10-2018 IPR021877 Protein of unknown function DUF3487 PA257_4267 1bc99cdcd7362f44284178af1853401d 279 Pfam PF13478 XdhC Rossmann domain 106 247 2.5E-38 T 12-10-2018 IPR027051 XdhC Rossmann domain PA257_4267 1bc99cdcd7362f44284178af1853401d 279 Pfam PF02625 XdhC and CoxI family 11 71 3.0E-18 T 12-10-2018 IPR003777 XdhC- CoxI PA257_4267 1bc99cdcd7362f44284178af1853401d 279 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 18 248 7.9E-100 T 12-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC PA257_4267 1bc99cdcd7362f44284178af1853401d 279 Gene3D G3DSA:3.40.50.720 104 252 4.7E-38 T 12-10-2018 PA257_4267 1bc99cdcd7362f44284178af1853401d 279 SUPERFAMILY SSF51735 97 188 3.73E-12 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2565 eecbf92b219755a60f0b6da4a7ddc07b 143 SUPERFAMILY SSF143744 5 138 4.32E-37 T 12-10-2018 IPR038084 GlcG-like domain superfamily PA257_2565 eecbf92b219755a60f0b6da4a7ddc07b 143 Pfam PF03928 Haem-degrading 11 134 2.7E-29 T 12-10-2018 IPR005624 Haem-degrading PA257_2565 eecbf92b219755a60f0b6da4a7ddc07b 143 Gene3D G3DSA:3.30.450.150 1 140 2.0E-41 T 12-10-2018 IPR038084 GlcG-like domain superfamily PA257_5404 ce1aed3d297dc4e954554b1cf5dfb647 190 SUPERFAMILY SSF101874 18 188 8.89E-16 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PA257_5404 ce1aed3d297dc4e954554b1cf5dfb647 190 SMART SM00867 19 188 2.4E-10 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PA257_5404 ce1aed3d297dc4e954554b1cf5dfb647 190 PIRSF PIRSF029811 1 190 5.2E-62 T 12-10-2018 IPR027016 Uncharacterised protein with YceI domain PA257_5404 ce1aed3d297dc4e954554b1cf5dfb647 190 Gene3D G3DSA:2.40.128.110 16 190 8.7E-46 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PA257_5404 ce1aed3d297dc4e954554b1cf5dfb647 190 Pfam PF04264 YceI-like domain 20 160 8.2E-8 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PA257_6228 cc1a9ecd7d6c50871847d33105663bf0 313 SUPERFAMILY SSF52540 1 142 2.15E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6228 cc1a9ecd7d6c50871847d33105663bf0 313 Gene3D G3DSA:1.10.20.140 104 186 8.7E-101 T 12-10-2018 PA257_6228 cc1a9ecd7d6c50871847d33105663bf0 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 304 27.728 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PA257_6228 cc1a9ecd7d6c50871847d33105663bf0 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 1 293 2.6E-99 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PA257_6228 cc1a9ecd7d6c50871847d33105663bf0 313 Pfam PF01715 IPP transferase 31 287 9.4E-87 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PA257_6228 cc1a9ecd7d6c50871847d33105663bf0 313 Gene3D G3DSA:3.40.50.300 1 292 8.7E-101 T 12-10-2018 PA257_6783 186da5be8e9f7e1958278f52dec4d0aa 312 Gene3D G3DSA:3.40.190.100 113 222 8.9E-84 T 12-10-2018 PA257_6783 186da5be8e9f7e1958278f52dec4d0aa 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 283 3.1E-54 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PA257_6783 186da5be8e9f7e1958278f52dec4d0aa 312 Gene3D G3DSA:3.40.190.10 31 292 8.9E-84 T 12-10-2018 PA257_6783 186da5be8e9f7e1958278f52dec4d0aa 312 SUPERFAMILY SSF53850 23 299 8.96E-77 T 12-10-2018 PA257_6783 186da5be8e9f7e1958278f52dec4d0aa 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 310 5.3E-133 T 12-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 PA257_2970 3e9e617fbf1733cf55e1d1d208f1e6c4 342 SMART SM00342 245 327 9.2E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2970 3e9e617fbf1733cf55e1d1d208f1e6c4 342 Pfam PF12833 Helix-turn-helix domain 251 328 2.6E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2970 3e9e617fbf1733cf55e1d1d208f1e6c4 342 Gene3D G3DSA:1.10.10.60 229 336 1.4E-22 T 12-10-2018 PA257_2970 3e9e617fbf1733cf55e1d1d208f1e6c4 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 43 198 2.2E-15 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_2970 3e9e617fbf1733cf55e1d1d208f1e6c4 342 SUPERFAMILY SSF46689 280 329 1.76E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5096 18ba5cdc1926b8349e2b2083146495fd 233 SUPERFAMILY SSF56784 1 229 3.89E-47 T 12-10-2018 IPR036412 HAD-like superfamily PA257_5096 18ba5cdc1926b8349e2b2083146495fd 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 194 7.0E-12 T 12-10-2018 PA257_5096 18ba5cdc1926b8349e2b2083146495fd 233 Gene3D G3DSA:1.10.150.240 16 97 8.6E-87 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PA257_5096 18ba5cdc1926b8349e2b2083146495fd 233 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 1 200 4.9E-66 T 12-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 PA257_5096 18ba5cdc1926b8349e2b2083146495fd 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 5.9E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_5096 18ba5cdc1926b8349e2b2083146495fd 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 5.9E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_5096 18ba5cdc1926b8349e2b2083146495fd 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 5.9E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_5096 18ba5cdc1926b8349e2b2083146495fd 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 5.9E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_5096 18ba5cdc1926b8349e2b2083146495fd 233 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 76 187 1.2E-18 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_5096 18ba5cdc1926b8349e2b2083146495fd 233 Gene3D G3DSA:3.40.50.1000 3 209 8.6E-87 T 12-10-2018 IPR023214 HAD superfamily PA257_1760 03943f090a70791e0d5a21b1fe8a8381 339 Gene3D G3DSA:1.10.287.470 50 123 8.9E-91 T 12-10-2018 PA257_1760 03943f090a70791e0d5a21b1fe8a8381 339 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 16 240 5.8E-19 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_1760 03943f090a70791e0d5a21b1fe8a8381 339 Gene3D G3DSA:2.40.50.100 15 158 8.9E-91 T 12-10-2018 PA257_1760 03943f090a70791e0d5a21b1fe8a8381 339 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 6 312 1.3E-77 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_1760 03943f090a70791e0d5a21b1fe8a8381 339 Gene3D G3DSA:2.40.30.170 2 250 8.9E-91 T 12-10-2018 PA257_1760 03943f090a70791e0d5a21b1fe8a8381 339 Gene3D G3DSA:2.40.420.20 251 316 8.9E-91 T 12-10-2018 PA257_1760 03943f090a70791e0d5a21b1fe8a8381 339 SUPERFAMILY SSF111369 4 247 1.22E-65 T 12-10-2018 PA257_3377 4ed91f51b74b37a423f260af4a0f53c7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 65 2.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3377 4ed91f51b74b37a423f260af4a0f53c7 298 Gene3D G3DSA:3.40.190.290 101 291 2.0E-30 T 12-10-2018 PA257_3377 4ed91f51b74b37a423f260af4a0f53c7 298 Gene3D G3DSA:1.10.10.10 3 100 1.2E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3377 4ed91f51b74b37a423f260af4a0f53c7 298 SUPERFAMILY SSF46785 10 122 2.79E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3377 4ed91f51b74b37a423f260af4a0f53c7 298 SUPERFAMILY SSF53850 100 293 2.35E-26 T 12-10-2018 PA257_3377 4ed91f51b74b37a423f260af4a0f53c7 298 Pfam PF03466 LysR substrate binding domain 99 293 2.1E-28 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0091 47e462c06196c7259e17f1036752fa28 570 Pfam PF03781 Sulfatase-modifying factor enzyme 1 127 359 4.0E-30 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 PA257_0091 47e462c06196c7259e17f1036752fa28 570 SUPERFAMILY SSF56436 127 360 2.59E-27 T 12-10-2018 IPR016187 C-type lectin fold PA257_0091 47e462c06196c7259e17f1036752fa28 570 Gene3D G3DSA:3.90.1580.10 108 361 2.2E-25 T 12-10-2018 PA257_6964 7bf68f8f528bc902ec655bdd00814742 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6964 7bf68f8f528bc902ec655bdd00814742 85 SUPERFAMILY SSF81333 3 78 1.15E-18 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily PA257_6964 7bf68f8f528bc902ec655bdd00814742 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.5E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6964 7bf68f8f528bc902ec655bdd00814742 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.5E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6964 7bf68f8f528bc902ec655bdd00814742 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.5E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6964 7bf68f8f528bc902ec655bdd00814742 85 Gene3D G3DSA:1.20.20.10 1 77 1.7E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6964 7bf68f8f528bc902ec655bdd00814742 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 14.112 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PA257_6964 7bf68f8f528bc902ec655bdd00814742 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.4E-29 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PA257_6964 7bf68f8f528bc902ec655bdd00814742 85 Pfam PF00137 ATP synthase subunit C 10 72 3.7E-9 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PA257_4430 21508be9bd24c71b6e21bb47991cbd92 477 PIRSF PIRSF006603 15 469 1.0E-64 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PA257_4430 21508be9bd24c71b6e21bb47991cbd92 477 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 432 2.0E-101 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PA257_4430 21508be9bd24c71b6e21bb47991cbd92 477 Pfam PF01554 MatE 27 186 8.4E-36 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PA257_4430 21508be9bd24c71b6e21bb47991cbd92 477 Pfam PF01554 MatE 254 414 1.1E-34 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PA257_0788 4edaac4f027dfded1d5b16dcaf0d68d1 140 SUPERFAMILY SSF82784 1 137 1.83E-41 T 12-10-2018 IPR036102 OsmC/Ohr superfamily PA257_0788 4edaac4f027dfded1d5b16dcaf0d68d1 140 Gene3D G3DSA:3.30.300.20 39 137 2.2E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_0788 4edaac4f027dfded1d5b16dcaf0d68d1 140 Gene3D G3DSA:2.20.25.10 1 32 9.0E-14 T 12-10-2018 PA257_0788 4edaac4f027dfded1d5b16dcaf0d68d1 140 Pfam PF02566 OsmC-like protein 34 132 2.8E-19 T 12-10-2018 IPR003718 OsmC/Ohr family PA257_1914 9e0fda1e03a5eef14469f79b15606fdb 334 Gene3D G3DSA:2.40.50.100 26 81 3.0E-10 T 12-10-2018 PA257_1914 9e0fda1e03a5eef14469f79b15606fdb 334 Gene3D G3DSA:1.10.287.470 82 181 1.7E-6 T 12-10-2018 PA257_1914 9e0fda1e03a5eef14469f79b15606fdb 334 SUPERFAMILY SSF111369 26 147 2.35E-11 T 12-10-2018 PA257_1914 9e0fda1e03a5eef14469f79b15606fdb 334 Pfam PF13437 HlyD family secretion protein 182 261 1.9E-7 T 12-10-2018 PA257_1914 9e0fda1e03a5eef14469f79b15606fdb 334 SUPERFAMILY SSF111369 162 229 4.45E-5 T 12-10-2018 PA257_1914 9e0fda1e03a5eef14469f79b15606fdb 334 Gene3D G3DSA:2.40.30.170 197 312 8.0E-16 T 12-10-2018 PA257_1914 9e0fda1e03a5eef14469f79b15606fdb 334 Pfam PF13533 Biotin-lipoyl like 25 70 8.2E-14 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PA257_0541 9377b5f14e9778b1dd041185099f3859 297 Gene3D G3DSA:3.30.1150.10 157 281 1.5E-17 T 12-10-2018 PA257_0541 9377b5f14e9778b1dd041185099f3859 297 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 213 289 2.5E-14 T 12-10-2018 IPR006260 TonB/TolA, C-terminal PA257_0541 9377b5f14e9778b1dd041185099f3859 297 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 211 288 2.9E-16 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 PA257_0541 9377b5f14e9778b1dd041185099f3859 297 SUPERFAMILY SSF74653 107 292 8.5E-20 T 12-10-2018 PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 292 1.0E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 SUPERFAMILY SSF55874 283 444 1.31E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 SMART SM00387 338 446 2.5E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 SMART SM00388 234 293 4.5E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 Pfam PF00672 HAMP domain 178 229 9.3E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 433 3.7E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 Gene3D G3DSA:1.10.287.130 182 294 1.4E-21 T 12-10-2018 PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 SUPERFAMILY SSF47384 218 292 1.96E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 Gene3D G3DSA:3.30.450.170 27 150 1.8E-42 T 12-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 SUPERFAMILY SSF158472 178 230 4.05E-7 T 12-10-2018 PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 SMART SM00304 178 233 1.7E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 Gene3D G3DSA:3.30.565.10 322 446 1.5E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 Pfam PF16750 Sensor domain of 2-component histidine kinase 40 149 7.7E-35 T 12-10-2018 IPR031930 2-component histidine kinase, sensor domain PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 1.1E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 1.1E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4910 a9de9d87d7e27d8ab61e327fac0e2eab 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 1.1E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_6295 79994cd1c8e88959935f79661a837fe1 252 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 23 224 2.3E-70 T 12-10-2018 PA257_6295 79994cd1c8e88959935f79661a837fe1 252 PIRSF PIRSF026326 3 246 9.5E-68 T 12-10-2018 IPR027023 Putative lipopolysaccharide kinase InaA PA257_6295 79994cd1c8e88959935f79661a837fe1 252 SUPERFAMILY SSF56112 35 242 9.49E-13 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_3861 1e719d244dc4ec1b2eb16b0567a52a9b 469 Gene3D G3DSA:3.40.50.1820 70 291 6.4E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3861 1e719d244dc4ec1b2eb16b0567a52a9b 469 SUPERFAMILY SSF53474 76 225 9.76E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2360 790d492250fa79304b391ae6105343bd 233 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 2 224 1.9E-67 T 12-10-2018 IPR012666 Cobalt transporter subunit CbtA, putative PA257_2360 790d492250fa79304b391ae6105343bd 233 TIGRFAM TIGR02458 CbtA: cobalt transporter subunit CbtA (proposed) 1 226 3.8E-95 T 12-10-2018 IPR012666 Cobalt transporter subunit CbtA, putative PA257_2961 94c30bb10e00f22800c635f414321bc8 322 Gene3D G3DSA:3.40.190.10 98 197 2.2E-84 T 12-10-2018 PA257_2961 94c30bb10e00f22800c635f414321bc8 322 Gene3D G3DSA:3.40.190.10 23 291 2.2E-84 T 12-10-2018 PA257_2961 94c30bb10e00f22800c635f414321bc8 322 SUPERFAMILY SSF53850 33 248 1.79E-46 T 12-10-2018 PA257_2961 94c30bb10e00f22800c635f414321bc8 322 SMART SM00062 22 234 8.0E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2961 94c30bb10e00f22800c635f414321bc8 322 Gene3D G3DSA:1.10.8.450 229 261 2.2E-84 T 12-10-2018 PA257_2961 94c30bb10e00f22800c635f414321bc8 322 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 23 303 2.3E-95 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 PA257_2961 94c30bb10e00f22800c635f414321bc8 322 Pfam PF09084 NMT1/THI5 like 58 236 4.8E-18 T 12-10-2018 IPR015168 SsuA/THI5-like PA257_2908 a3270687efb81d0b45651a0b900fee97 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 19.323 T 12-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PA257_2908 a3270687efb81d0b45651a0b900fee97 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 96 4.4E-22 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like PA257_2092 5c23d62536a0f573f9e3b6cd54c64c34 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 4.8E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_2092 5c23d62536a0f573f9e3b6cd54c64c34 225 SMART SM00448 2 113 1.3E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2092 5c23d62536a0f573f9e3b6cd54c64c34 225 SUPERFAMILY SSF46894 123 223 1.02E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_2092 5c23d62536a0f573f9e3b6cd54c64c34 225 SUPERFAMILY SSF52172 4 128 8.25E-40 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2092 5c23d62536a0f573f9e3b6cd54c64c34 225 Gene3D G3DSA:3.40.50.2300 1 118 2.9E-33 T 12-10-2018 PA257_2092 5c23d62536a0f573f9e3b6cd54c64c34 225 Pfam PF00072 Response regulator receiver domain 5 113 1.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2092 5c23d62536a0f573f9e3b6cd54c64c34 225 Gene3D G3DSA:1.10.10.10 119 225 9.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2092 5c23d62536a0f573f9e3b6cd54c64c34 225 SMART SM00862 147 223 3.5E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 Gene3D G3DSA:3.90.380.10 15 409 1.6E-97 T 12-10-2018 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 Pfam PF00355 Rieske [2Fe-2S] domain 37 121 1.1E-18 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 157 410 4.3E-17 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 137 163 6.4E-32 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 22 47 6.4E-32 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 178 200 6.4E-32 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 52 67 6.4E-32 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 73 93 6.4E-32 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 6.4E-32 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 80 103 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 Gene3D G3DSA:2.102.10.10 37 161 1.6E-97 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 SUPERFAMILY SSF55961 156 414 2.43E-49 T 12-10-2018 PA257_3648 610ebe397d436142b9e5f1ebfb98c02c 424 SUPERFAMILY SSF50022 8 151 2.62E-42 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_1113 1b11d8536e35cf8f37c97ceaadde1700 308 SUPERFAMILY SSF52540 2 224 1.2E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1113 1b11d8536e35cf8f37c97ceaadde1700 308 Gene3D G3DSA:3.40.50.300 1 233 4.3E-64 T 12-10-2018 PA257_1113 1b11d8536e35cf8f37c97ceaadde1700 308 SMART SM00382 26 210 5.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1113 1b11d8536e35cf8f37c97ceaadde1700 308 Pfam PF00005 ABC transporter 18 160 2.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6521 6f6289d8a27f16674ee915c374f4a2b6 461 PIRSF PIRSF006060 1 459 4.4E-47 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_6521 6f6289d8a27f16674ee915c374f4a2b6 461 Gene3D G3DSA:1.20.1740.10 1 454 7.0E-55 T 12-10-2018 PA257_6521 6f6289d8a27f16674ee915c374f4a2b6 461 Pfam PF13520 Amino acid permease 1 433 3.5E-73 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_6521 6f6289d8a27f16674ee915c374f4a2b6 461 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 1 460 1.8E-210 T 12-10-2018 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 PA257_6521 6f6289d8a27f16674ee915c374f4a2b6 461 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 461 2.6E-197 T 12-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 PA257_3384 14c98d83f8c22715c895f054680e1553 260 Gene3D G3DSA:3.20.20.150 1 260 3.0E-82 T 12-10-2018 PA257_3384 14c98d83f8c22715c895f054680e1553 260 Pfam PF01261 Xylose isomerase-like TIM barrel 111 198 6.6E-8 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PA257_3384 14c98d83f8c22715c895f054680e1553 260 SUPERFAMILY SSF51658 5 250 3.89E-67 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily PA257_0423 21b0c7617b286ab416ea7f6d54fecf47 168 PIRSF PIRSF000194 1 168 1.3E-58 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 PA257_0423 21b0c7617b286ab416ea7f6d54fecf47 168 Gene3D G3DSA:3.40.430.10 4 168 9.8E-55 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PA257_0423 21b0c7617b286ab416ea7f6d54fecf47 168 Pfam PF00186 Dihydrofolate reductase 5 167 9.7E-55 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 PA257_0423 21b0c7617b286ab416ea7f6d54fecf47 168 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 16 38 - T 12-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 PA257_0423 21b0c7617b286ab416ea7f6d54fecf47 168 SUPERFAMILY SSF53597 4 168 2.11E-55 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PA257_0423 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 100 114 6.8E-16 T 12-10-2018 PA257_0423 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 30 38 6.8E-16 T 12-10-2018 PA257_0423 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 16 26 6.8E-16 T 12-10-2018 PA257_0423 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 43 54 6.8E-16 T 12-10-2018 PA257_3516 e521140593c0781b0ba04680ef7f70a8 416 Gene3D G3DSA:2.40.160.10 34 416 1.5E-166 T 12-10-2018 IPR023614 Porin domain superfamily PA257_3516 e521140593c0781b0ba04680ef7f70a8 416 Pfam PF03573 outer membrane porin, OprD family 29 414 6.8E-156 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_6635 47a1853ded0fde3717333bebeb6f30e3 233 Pfam PF04340 Protein of unknown function, DUF484 8 227 1.5E-87 T 12-10-2018 IPR007435 Protein of unknown function DUF484 PA257_6635 47a1853ded0fde3717333bebeb6f30e3 233 Gene3D G3DSA:3.30.450.40 46 233 1.7E-64 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_1755 f35890dc9ed1ff32c385b91bf416066b 224 Pfam PF00929 Exonuclease 32 206 1.6E-32 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_1755 f35890dc9ed1ff32c385b91bf416066b 224 SMART SM00479 30 215 7.7E-24 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_1755 f35890dc9ed1ff32c385b91bf416066b 224 Hamap MF_00157 Ribonuclease T [rnt]. 1 224 112.439 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 PA257_1755 f35890dc9ed1ff32c385b91bf416066b 224 TIGRFAM TIGR01298 RNaseT: ribonuclease T 22 221 1.4E-116 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 PA257_1755 f35890dc9ed1ff32c385b91bf416066b 224 SUPERFAMILY SSF53098 21 219 3.19E-57 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_1755 f35890dc9ed1ff32c385b91bf416066b 224 Gene3D G3DSA:3.30.420.10 19 224 1.3E-57 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_0392 ade2d67244294c662240fc3185300c8a 347 SUPERFAMILY SSF53850 24 346 2.54E-82 T 12-10-2018 PA257_0392 ade2d67244294c662240fc3185300c8a 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 1.6E-46 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0392 ade2d67244294c662240fc3185300c8a 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 1.6E-46 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0392 ade2d67244294c662240fc3185300c8a 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 1.6E-46 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0392 ade2d67244294c662240fc3185300c8a 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 1.6E-46 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0392 ade2d67244294c662240fc3185300c8a 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 1.6E-46 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0392 ade2d67244294c662240fc3185300c8a 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 1.6E-46 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0392 ade2d67244294c662240fc3185300c8a 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 1.6E-46 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0392 ade2d67244294c662240fc3185300c8a 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 1.6E-46 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0392 ade2d67244294c662240fc3185300c8a 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 1.6E-46 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0392 ade2d67244294c662240fc3185300c8a 347 Gene3D G3DSA:3.40.190.10 27 317 4.4E-101 T 12-10-2018 PA257_0392 ade2d67244294c662240fc3185300c8a 347 Gene3D G3DSA:3.40.190.10 129 343 4.4E-101 T 12-10-2018 PA257_0392 ade2d67244294c662240fc3185300c8a 347 Pfam PF13416 Bacterial extracellular solute-binding protein 40 301 1.8E-29 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_0392 ade2d67244294c662240fc3185300c8a 347 PIRSF PIRSF019574 5 347 4.5E-109 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_5387 be60ea22fe0e04dac6f21bb333c565db 443 Pfam PF01882 Protein of unknown function DUF58 199 283 6.2E-23 T 12-10-2018 IPR002881 Domain of unknown function DUF58 PA257_5387 be60ea22fe0e04dac6f21bb333c565db 443 SUPERFAMILY SSF53300 240 365 1.53E-7 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_5387 be60ea22fe0e04dac6f21bb333c565db 443 Gene3D G3DSA:3.40.50.410 233 393 2.2E-6 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 SUPERFAMILY SSF51905 1 304 1.3E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 Gene3D G3DSA:1.10.10.1100 331 391 2.4E-11 T 12-10-2018 PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 Gene3D G3DSA:3.50.50.60 5 285 3.0E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 2.2E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 2.2E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 100 108 2.2E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 2.2E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 288 2.1E-20 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 PIRSF PIRSF037495 1 416 1.1E-104 T 12-10-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 Gene3D G3DSA:3.50.50.60 111 243 3.0E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 8.5E-16 T 12-10-2018 PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 8.5E-16 T 12-10-2018 PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.5E-16 T 12-10-2018 PA257_4533 a3c937f26e02dec5424ecf0a9f75eb93 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 8.5E-16 T 12-10-2018 PA257_4024 22fb2a71fd5b5849ca02f823f9d6341c 358 SUPERFAMILY SSF51569 8 349 2.56E-133 T 12-10-2018 PA257_4024 22fb2a71fd5b5849ca02f823f9d6341c 358 Pfam PF00793 DAHP synthetase I family 42 339 1.8E-93 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PA257_4024 22fb2a71fd5b5849ca02f823f9d6341c 358 Gene3D G3DSA:3.20.20.70 2 351 7.6E-150 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4024 22fb2a71fd5b5849ca02f823f9d6341c 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 349 7.7E-149 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PA257_4024 22fb2a71fd5b5849ca02f823f9d6341c 358 PIRSF PIRSF001361 1 355 7.2E-156 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 TIGRFAM TIGR00746 arcC: carbamate kinase 1 301 9.9E-139 T 12-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 Pfam PF00696 Amino acid kinase family 1 283 1.2E-25 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 Gene3D G3DSA:3.40.1160.10 1 302 1.5E-114 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 PIRSF PIRSF000723 1 302 1.1E-111 T 12-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 SUPERFAMILY SSF53633 1 300 3.8E-78 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 2.6E-70 T 12-10-2018 PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 2.6E-70 T 12-10-2018 PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 2.6E-70 T 12-10-2018 PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 2.6E-70 T 12-10-2018 PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 2.6E-70 T 12-10-2018 PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 2.6E-70 T 12-10-2018 PA257_6524 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 71 89 2.6E-70 T 12-10-2018 PA257_1943 8fa5934cfc518e6e310a503dcc57e086 330 Gene3D G3DSA:3.40.47.10 1 173 4.2E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1943 8fa5934cfc518e6e310a503dcc57e086 330 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 322 2.2E-98 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_1943 8fa5934cfc518e6e310a503dcc57e086 330 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 322 63.009 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_1943 8fa5934cfc518e6e310a503dcc57e086 330 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 105 185 1.2E-24 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_1943 8fa5934cfc518e6e310a503dcc57e086 330 SUPERFAMILY SSF53901 8 323 1.14E-55 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1943 8fa5934cfc518e6e310a503dcc57e086 330 Gene3D G3DSA:3.40.47.10 174 330 3.8E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_1943 8fa5934cfc518e6e310a503dcc57e086 330 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 233 322 2.7E-31 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_5405 927a9e882bd95010e9b60d22837a786a 256 SUPERFAMILY SSF55781 85 255 1.41E-19 T 12-10-2018 PA257_5405 927a9e882bd95010e9b60d22837a786a 256 Gene3D G3DSA:3.30.450.40 83 253 9.2E-22 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_5405 927a9e882bd95010e9b60d22837a786a 256 Pfam PF09339 IclR helix-turn-helix domain 12 60 9.1E-15 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_5405 927a9e882bd95010e9b60d22837a786a 256 SUPERFAMILY SSF46785 10 70 3.61E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5405 927a9e882bd95010e9b60d22837a786a 256 Gene3D G3DSA:1.10.10.10 2 69 1.5E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5405 927a9e882bd95010e9b60d22837a786a 256 SMART SM00346 10 99 2.5E-9 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_1652 caaede5f1af05f4e82e0b1079cbe6657 267 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 227 1.7E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_1652 caaede5f1af05f4e82e0b1079cbe6657 267 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 1.1E-11 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_1652 caaede5f1af05f4e82e0b1079cbe6657 267 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 1.1E-11 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_1652 caaede5f1af05f4e82e0b1079cbe6657 267 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.1E-11 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_1652 caaede5f1af05f4e82e0b1079cbe6657 267 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 170 182 1.1E-11 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_1652 caaede5f1af05f4e82e0b1079cbe6657 267 PIRSF PIRSF000398 1 258 9.3E-43 T 12-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 PA257_1652 caaede5f1af05f4e82e0b1079cbe6657 267 SUPERFAMILY SSF53335 1 255 2.24E-60 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1652 caaede5f1af05f4e82e0b1079cbe6657 267 Gene3D G3DSA:1.10.1020.10 57 150 4.6E-40 T 12-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 PA257_1652 caaede5f1af05f4e82e0b1079cbe6657 267 Gene3D G3DSA:3.40.50.150 7 222 4.6E-40 T 12-10-2018 PA257_4549 520f90a68afe0ec536c131db47372d2b 108 PRINTS PR01274 Metalloprotease inhibitor signature 45 56 3.6E-17 T 12-10-2018 IPR022815 Protease inhibitor I38 PA257_4549 520f90a68afe0ec536c131db47372d2b 108 PRINTS PR01274 Metalloprotease inhibitor signature 3 19 3.6E-17 T 12-10-2018 IPR022815 Protease inhibitor I38 PA257_4549 520f90a68afe0ec536c131db47372d2b 108 PRINTS PR01274 Metalloprotease inhibitor signature 84 97 3.6E-17 T 12-10-2018 IPR022815 Protease inhibitor I38 PA257_4549 520f90a68afe0ec536c131db47372d2b 108 PRINTS PR01274 Metalloprotease inhibitor signature 67 80 3.6E-17 T 12-10-2018 IPR022815 Protease inhibitor I38 PA257_4549 520f90a68afe0ec536c131db47372d2b 108 SUPERFAMILY SSF50882 3 105 1.52E-26 T 12-10-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 PA257_4549 520f90a68afe0ec536c131db47372d2b 108 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 15 102 2.0E-34 T 12-10-2018 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 PA257_4549 520f90a68afe0ec536c131db47372d2b 108 Pfam PF02974 Protease inhibitor Inh 8 105 1.2E-22 T 12-10-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 PA257_4549 520f90a68afe0ec536c131db47372d2b 108 Gene3D G3DSA:2.40.128.10 3 108 2.5E-37 T 12-10-2018 PA257_6479 2ff55a9fb350a3b5ac876e6042b3fa52 605 Pfam PF12571 Phage tail-collar fibre protein 6 152 1.6E-57 T 12-10-2018 IPR022225 Phage tail fibre protein PA257_6479 2ff55a9fb350a3b5ac876e6042b3fa52 605 Gene3D G3DSA:2.60.40.3940 506 605 8.8E-10 T 12-10-2018 PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 Pfam PF00069 Protein kinase domain 160 351 1.5E-18 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 Pfam PF13086 AAA domain 952 1042 8.3E-7 T 12-10-2018 PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 SUPERFAMILY SSF56112 158 360 5.68E-31 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 SUPERFAMILY SSF52540 952 1962 4.7E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 Pfam PF13087 AAA domain 1722 1916 4.8E-22 T 12-10-2018 PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 Gene3D G3DSA:1.10.510.10 115 395 1.6E-28 T 12-10-2018 PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 Gene3D G3DSA:3.40.50.300 902 1120 2.3E-18 T 12-10-2018 PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 Gene3D G3DSA:3.40.50.300 1439 1694 3.8E-10 T 12-10-2018 PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 Gene3D G3DSA:3.40.50.300 1732 1928 3.1E-30 T 12-10-2018 PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 SMART SM00220 129 355 6.2E-9 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PA257_2818 765ce73ce4958ec8e20bab4353944f8c 2098 Pfam PF13195 Protein of unknown function (DUF4011) 741 831 3.8E-9 T 12-10-2018 IPR025103 Protein of unknown function DUF4011 PA257_2911 e01916b27c466b8a9d40dbe88b481452 331 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 212 225 - T 12-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2911 e01916b27c466b8a9d40dbe88b481452 331 Pfam PF00146 NADH dehydrogenase 17 322 7.0E-115 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2911 e01916b27c466b8a9d40dbe88b481452 331 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 329 23.413 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2196 efda637d88bd04e6a7834cec4f605885 172 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 2.8E-12 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PA257_2196 efda637d88bd04e6a7834cec4f605885 172 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 2.8E-12 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PA257_2196 efda637d88bd04e6a7834cec4f605885 172 PRINTS PR00885 Bacterial general secretion pathway protein H signature 128 143 2.8E-12 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PA257_2196 efda637d88bd04e6a7834cec4f605885 172 Pfam PF12019 Type II transport protein GspH 42 161 3.9E-10 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PA257_2196 efda637d88bd04e6a7834cec4f605885 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2196 efda637d88bd04e6a7834cec4f605885 172 SUPERFAMILY SSF54523 7 89 4.55E-13 T 12-10-2018 PA257_2196 efda637d88bd04e6a7834cec4f605885 172 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 149 2.4E-19 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PA257_2196 efda637d88bd04e6a7834cec4f605885 172 Gene3D G3DSA:3.55.40.10 35 166 1.0E-28 T 12-10-2018 PA257_2196 efda637d88bd04e6a7834cec4f605885 172 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 7.5E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2196 efda637d88bd04e6a7834cec4f605885 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.1E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_3881 c029632995daefbcbfc1fd661a9ddd6d 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.119 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PA257_3881 c029632995daefbcbfc1fd661a9ddd6d 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site PA257_3881 c029632995daefbcbfc1fd661a9ddd6d 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 2.0E-26 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PA257_3881 c029632995daefbcbfc1fd661a9ddd6d 79 Pfam PF00550 Phosphopantetheine attachment site 7 73 5.4E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_3881 c029632995daefbcbfc1fd661a9ddd6d 79 SMART SM00823 Phosphopantetheine attachment site 5 77 0.004 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PA257_3881 c029632995daefbcbfc1fd661a9ddd6d 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 51 72 3.0E-5 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PA257_3881 c029632995daefbcbfc1fd661a9ddd6d 79 SUPERFAMILY SSF47336 1 77 1.28E-20 T 12-10-2018 IPR036736 ACP-like superfamily PA257_3881 c029632995daefbcbfc1fd661a9ddd6d 79 Gene3D G3DSA:1.10.1200.10 1 76 5.0E-24 T 12-10-2018 IPR036736 ACP-like superfamily PA257_2915 0a7ff7c8344ae362a8862645147ce861 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 165 1.5E-48 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2915 0a7ff7c8344ae362a8862645147ce861 166 PIRSF PIRSF000216 3 166 5.0E-52 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2915 0a7ff7c8344ae362a8862645147ce861 166 Gene3D G3DSA:3.40.30.10 83 165 4.4E-24 T 12-10-2018 PA257_2915 0a7ff7c8344ae362a8862645147ce861 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2915 0a7ff7c8344ae362a8862645147ce861 166 Gene3D G3DSA:1.10.10.1590 13 82 1.6E-16 T 12-10-2018 PA257_2915 0a7ff7c8344ae362a8862645147ce861 166 SUPERFAMILY SSF52833 15 165 3.58E-48 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2915 0a7ff7c8344ae362a8862645147ce861 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 165 4.7E-50 T 12-10-2018 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 SUPERFAMILY SSF50249 3 123 3.48E-51 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 6.4E-70 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 PIRSF PIRSF002133 1 123 9.8E-53 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 Pfam PF00164 Ribosomal protein S12/S23 12 123 3.6E-42 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.002 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 Gene3D G3DSA:2.40.50.140 1 123 2.7E-62 T 12-10-2018 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.4E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.4E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.4E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.4E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.4E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0827 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.4E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 SMART SM00448 5 116 5.5E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 SUPERFAMILY SSF52540 140 384 2.01E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:3.40.50.2300 3 125 4.0E-37 T 12-10-2018 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 SUPERFAMILY SSF52172 5 186 4.84E-43 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:3.40.50.300 130 312 7.4E-67 T 12-10-2018 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:1.10.10.60 385 466 2.1E-25 T 12-10-2018 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 463 2.4E-243 T 12-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 Pfam PF02954 Bacterial regulatory protein, Fis family 423 463 4.7E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:1.10.8.60 313 384 9.3E-19 T 12-10-2018 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 2.7E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 2.7E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 Pfam PF00158 Sigma-54 interaction domain 141 308 3.8E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 Pfam PF00072 Response regulator receiver domain 7 115 1.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 SMART SM00382 161 304 7.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6417 52c6c342f610b5d2d564aea994e3b4ba 476 SUPERFAMILY SSF46689 381 465 6.27E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3389 df9161bb604711f997a1e8476fb5870c 500 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 281 480 1.1E-54 T 12-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal PA257_3389 df9161bb604711f997a1e8476fb5870c 500 Gene3D G3DSA:2.40.110.10 145 272 2.4E-41 T 12-10-2018 PA257_3389 df9161bb604711f997a1e8476fb5870c 500 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 11 273 6.8E-89 T 12-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal PA257_3389 df9161bb604711f997a1e8476fb5870c 500 SUPERFAMILY SSF56645 9 274 5.04E-74 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_3389 df9161bb604711f997a1e8476fb5870c 500 PIRSF PIRSF000331 7 492 1.3E-182 T 12-10-2018 IPR004925 HpaB/PvcC/4-BUDH PA257_3389 df9161bb604711f997a1e8476fb5870c 500 Gene3D G3DSA:1.10.3140.10 9 144 3.2E-42 T 12-10-2018 PA257_3389 df9161bb604711f997a1e8476fb5870c 500 Gene3D G3DSA:1.20.140.10 273 468 1.2E-54 T 12-10-2018 PA257_3389 df9161bb604711f997a1e8476fb5870c 500 PIRSF PIRSF500125 1 500 1.3E-234 T 12-10-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein PA257_3389 df9161bb604711f997a1e8476fb5870c 500 SUPERFAMILY SSF47203 265 484 2.09E-50 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_1654 a8ff0f48297d11ae016fd1f07d47e2de 302 Pfam PF06616 BsuBI/PstI restriction endonuclease C-terminus 33 289 4.5E-67 T 12-10-2018 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal GO:0000287|GO:0003677|GO:0009036|GO:0009307 PA257_1654 a8ff0f48297d11ae016fd1f07d47e2de 302 Gene3D G3DSA:3.40.1350.80 129 291 7.8E-42 T 12-10-2018 PA257_2703 0d167c2e6aea47bd5a80655431672e34 359 PIRSF PIRSF034565 5 357 1.0E-55 T 12-10-2018 IPR017029 Putative phage head morphogenesis protein PA257_6574 2df06660b0537fd57d6840868178eca6 162 Pfam PF14539 Domain of unknown function (DUF4442) 9 152 1.6E-28 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 PA257_6574 2df06660b0537fd57d6840868178eca6 162 SUPERFAMILY SSF54637 11 153 3.38E-25 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6574 2df06660b0537fd57d6840868178eca6 162 Gene3D G3DSA:3.10.129.10 15 158 5.9E-28 T 12-10-2018 PA257_6915 dd72290037d5f1dc7ab0cdd46c9c23a2 292 SUPERFAMILY SSF53474 12 288 2.57E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6915 dd72290037d5f1dc7ab0cdd46c9c23a2 292 Gene3D G3DSA:3.40.50.1820 13 290 4.9E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6915 dd72290037d5f1dc7ab0cdd46c9c23a2 292 Pfam PF12697 Alpha/beta hydrolase family 31 281 3.3E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0172 e934fd861a8f265b531b21d936ec354a 365 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 36 302 1.8E-52 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 PA257_0172 e934fd861a8f265b531b21d936ec354a 365 Gene3D G3DSA:3.40.50.2300 36 292 5.9E-128 T 12-10-2018 PA257_0172 e934fd861a8f265b531b21d936ec354a 365 Gene3D G3DSA:3.40.50.2300 139 355 5.9E-128 T 12-10-2018 PA257_0172 e934fd861a8f265b531b21d936ec354a 365 SUPERFAMILY SSF53822 174 245 7.06E-5 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_6790 a4f4476a32dd0025ee078ea46d5c440d 156 Gene3D G3DSA:3.10.450.50 12 156 7.3E-78 T 12-10-2018 PA257_6790 a4f4476a32dd0025ee078ea46d5c440d 156 Pfam PF07080 Protein of unknown function (DUF1348) 9 138 1.3E-67 T 12-10-2018 IPR009783 Protein of unknown function DUF1348 PA257_6790 a4f4476a32dd0025ee078ea46d5c440d 156 SUPERFAMILY SSF54427 4 156 4.39E-81 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_0904 f6b97eb49ece80c522f8cb3ee7d45ae9 442 SUPERFAMILY SSF103473 8 436 2.88E-72 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0904 f6b97eb49ece80c522f8cb3ee7d45ae9 442 Gene3D G3DSA:1.20.1250.20 14 441 4.6E-83 T 12-10-2018 PA257_0904 f6b97eb49ece80c522f8cb3ee7d45ae9 442 Pfam PF00083 Sugar (and other) transporter 48 438 2.0E-51 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PA257_0904 f6b97eb49ece80c522f8cb3ee7d45ae9 442 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_2244 a0548afb97d3a989d81d73aa19a88fe8 158 Gene3D G3DSA:1.10.260.40 11 94 1.5E-6 T 12-10-2018 PA257_2244 a0548afb97d3a989d81d73aa19a88fe8 158 SUPERFAMILY SSF47413 12 64 4.07E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_6128 fb789150cafe1cd4a6e2454b685ce83e 332 Pfam PF01207 Dihydrouridine synthase (Dus) 16 320 5.7E-110 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PA257_6128 fb789150cafe1cd4a6e2454b685ce83e 332 Gene3D G3DSA:3.20.20.70 10 251 7.1E-80 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_6128 fb789150cafe1cd4a6e2454b685ce83e 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 6 321 1.1E-126 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 PA257_6128 fb789150cafe1cd4a6e2454b685ce83e 332 Gene3D G3DSA:1.10.1200.80 256 328 9.6E-11 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 PA257_6128 fb789150cafe1cd4a6e2454b685ce83e 332 SUPERFAMILY SSF51395 13 322 1.3E-94 T 12-10-2018 PA257_6128 fb789150cafe1cd4a6e2454b685ce83e 332 PIRSF PIRSF006621 3 330 7.1E-107 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PA257_6128 fb789150cafe1cd4a6e2454b685ce83e 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PA257_6128 fb789150cafe1cd4a6e2454b685ce83e 332 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 4 324 50.983 T 12-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 PA257_4116 487d0851d45bcb176fb49bd1201d9a67 135 Pfam PF04965 Gene 25-like lysozyme 26 113 1.4E-15 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD PA257_4116 487d0851d45bcb176fb49bd1201d9a67 135 Gene3D G3DSA:3.10.450.40 6 123 1.1E-6 T 12-10-2018 PA257_4116 487d0851d45bcb176fb49bd1201d9a67 135 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 134 3.4E-38 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein PA257_4116 487d0851d45bcb176fb49bd1201d9a67 135 SUPERFAMILY SSF160719 24 128 4.45E-19 T 12-10-2018 PA257_2408 bdeb4fd6f7f738d995ccdcff6853e4c1 282 Gene3D G3DSA:3.40.190.10 121 217 2.7E-21 T 12-10-2018 PA257_2408 bdeb4fd6f7f738d995ccdcff6853e4c1 282 SUPERFAMILY SSF53850 34 252 1.18E-30 T 12-10-2018 PA257_2408 bdeb4fd6f7f738d995ccdcff6853e4c1 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 248 5.0E-17 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2408 bdeb4fd6f7f738d995ccdcff6853e4c1 282 Gene3D G3DSA:3.40.190.10 38 250 2.7E-21 T 12-10-2018 PA257_2408 bdeb4fd6f7f738d995ccdcff6853e4c1 282 SMART SM00062 31 262 0.0084 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_3729 d990c0d67a26fada83bca1c5d4faf11f 267 SUPERFAMILY SSF55781 82 261 5.69E-39 T 12-10-2018 PA257_3729 d990c0d67a26fada83bca1c5d4faf11f 267 SUPERFAMILY SSF46785 16 90 9.39E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3729 d990c0d67a26fada83bca1c5d4faf11f 267 SMART SM00346 16 106 6.8E-20 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_3729 d990c0d67a26fada83bca1c5d4faf11f 267 Pfam PF09339 IclR helix-turn-helix domain 18 68 2.6E-13 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_3729 d990c0d67a26fada83bca1c5d4faf11f 267 Gene3D G3DSA:1.10.10.10 13 88 4.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3729 d990c0d67a26fada83bca1c5d4faf11f 267 Pfam PF01614 Bacterial transcriptional regulator 134 257 2.5E-16 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal PA257_3729 d990c0d67a26fada83bca1c5d4faf11f 267 Gene3D G3DSA:3.30.450.40 89 264 3.4E-36 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_4595 5bd8ad4295ac255febd1d72eeb5603bc 211 SUPERFAMILY SSF53474 36 207 9.56E-22 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4595 5bd8ad4295ac255febd1d72eeb5603bc 211 Pfam PF12697 Alpha/beta hydrolase family 31 203 6.7E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_4595 5bd8ad4295ac255febd1d72eeb5603bc 211 Gene3D G3DSA:3.40.50.1820 4 210 1.0E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3780 85bbc31a6ffe24f84fd4b0c63c79c4d4 202 SUPERFAMILY SSF52218 1 199 8.22E-54 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_3780 85bbc31a6ffe24f84fd4b0c63c79c4d4 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 199 30.908 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 PA257_3780 85bbc31a6ffe24f84fd4b0c63c79c4d4 202 Pfam PF02525 Flavodoxin-like fold 1 196 3.5E-47 T 12-10-2018 IPR003680 Flavodoxin-like fold PA257_3780 85bbc31a6ffe24f84fd4b0c63c79c4d4 202 Gene3D G3DSA:3.40.50.360 1 201 4.7E-62 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_1956 794b0e4823cbb5d90b108f34545625d1 151 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 144 5.0E-36 T 12-10-2018 IPR006750 Putative inner membrane exporter, YdcZ PA257_0235 d6abc9a2ab46de7d270847ffe7d0c219 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 7.0E-39 T 12-10-2018 IPR009662 Malonate decarboxylase delta subunit PA257_0235 d6abc9a2ab46de7d270847ffe7d0c219 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 2.5E-35 T 12-10-2018 IPR009662 Malonate decarboxylase delta subunit PA257_0235 d6abc9a2ab46de7d270847ffe7d0c219 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 17 96 3.9E-26 T 12-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein PA257_0235 d6abc9a2ab46de7d270847ffe7d0c219 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 53.549 T 12-10-2018 IPR009662 Malonate decarboxylase delta subunit PA257_0836 2469a8e8ac64f8ae89c6400722106914 91 SUPERFAMILY SSF54570 3 84 1.11E-34 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0836 2469a8e8ac64f8ae89c6400722106914 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.717 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0836 2469a8e8ac64f8ae89c6400722106914 91 Pfam PF00203 Ribosomal protein S19 3 83 6.0E-35 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0836 2469a8e8ac64f8ae89c6400722106914 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.2E-22 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0836 2469a8e8ac64f8ae89c6400722106914 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.2E-22 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0836 2469a8e8ac64f8ae89c6400722106914 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.2E-22 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0836 2469a8e8ac64f8ae89c6400722106914 91 PIRSF PIRSF002144 1 91 3.3E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0836 2469a8e8ac64f8ae89c6400722106914 91 Gene3D G3DSA:3.30.860.10 1 91 3.4E-40 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0836 2469a8e8ac64f8ae89c6400722106914 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 8.3E-44 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 PA257_0836 2469a8e8ac64f8ae89c6400722106914 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_1475 dc078be22bac475e3a26082c360e3942 175 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 174 1.9E-53 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PA257_1475 dc078be22bac475e3a26082c360e3942 175 Pfam PF05239 PRC-barrel domain 98 170 3.1E-7 T 12-10-2018 IPR027275 PRC-barrel domain PA257_1475 dc078be22bac475e3a26082c360e3942 175 Pfam PF01782 RimM N-terminal domain 10 92 2.1E-26 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 PA257_1475 dc078be22bac475e3a26082c360e3942 175 SUPERFAMILY SSF50346 101 175 2.55E-21 T 12-10-2018 IPR011033 PRC-barrel-like superfamily PA257_1475 dc078be22bac475e3a26082c360e3942 175 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 8 175 24.458 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PA257_1475 dc078be22bac475e3a26082c360e3942 175 SUPERFAMILY SSF50447 7 94 1.73E-25 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_1475 dc078be22bac475e3a26082c360e3942 175 Gene3D G3DSA:2.30.30.240 101 175 9.4E-32 T 12-10-2018 PA257_1475 dc078be22bac475e3a26082c360e3942 175 Gene3D G3DSA:2.40.30.60 7 95 2.8E-35 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 PA257_3571 caad487142cb84a643d448ebdcc6d6dd 245 Gene3D G3DSA:3.60.10.10 5 244 8.9E-40 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_3571 caad487142cb84a643d448ebdcc6d6dd 245 SUPERFAMILY SSF56219 5 243 7.46E-43 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_3571 caad487142cb84a643d448ebdcc6d6dd 245 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 236 1.5E-11 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PA257_4345 f093093796e3298468cfe408fcb399ea 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.0E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PA257_4345 f093093796e3298468cfe408fcb399ea 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.0E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PA257_4345 f093093796e3298468cfe408fcb399ea 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.0E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PA257_4345 f093093796e3298468cfe408fcb399ea 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.0E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PA257_4345 f093093796e3298468cfe408fcb399ea 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 7.8E-68 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PA257_4345 f093093796e3298468cfe408fcb399ea 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 1.5E-82 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 PA257_1387 e643fae0d709ae7a55fe5597bfb07a7f 209 Pfam PF00857 Isochorismatase family 9 174 6.4E-31 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_1387 e643fae0d709ae7a55fe5597bfb07a7f 209 Gene3D G3DSA:3.40.50.850 3 209 3.2E-55 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_1387 e643fae0d709ae7a55fe5597bfb07a7f 209 SUPERFAMILY SSF52499 6 187 2.35E-45 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_1353 1df965c74fe08cf678ff5c2716a1800a 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 4.5E-47 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type PA257_1353 1df965c74fe08cf678ff5c2716a1800a 163 SUPERFAMILY SSF46785 2 132 1.82E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1353 1df965c74fe08cf678ff5c2716a1800a 163 Gene3D G3DSA:1.10.10.10 1 144 2.0E-53 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1353 1df965c74fe08cf678ff5c2716a1800a 163 Pfam PF02082 Transcriptional regulator 1 83 8.0E-28 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type PA257_1353 1df965c74fe08cf678ff5c2716a1800a 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 5.7E-67 T 12-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 PA257_4063 2dedf099b32bdb86e66c7551f49b7185 62 Gene3D G3DSA:3.30.1490.370 1 62 3.2E-37 T 12-10-2018 PA257_2580 72ff7039721dacb6d4267cdd9139d82f 302 SUPERFAMILY SSF52540 33 228 4.84E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2580 72ff7039721dacb6d4267cdd9139d82f 302 Gene3D G3DSA:3.40.50.300 24 212 9.7E-18 T 12-10-2018 PA257_2580 72ff7039721dacb6d4267cdd9139d82f 302 Pfam PF05621 Bacterial TniB protein 27 278 3.6E-103 T 12-10-2018 IPR008868 Bacterial TniB PA257_6135 cce2a82efb6ba76a14b66e80489b0f3b 421 Gene3D G3DSA:3.40.50.2300 33 375 1.1E-141 T 12-10-2018 PA257_6135 cce2a82efb6ba76a14b66e80489b0f3b 421 Gene3D G3DSA:3.40.50.2300 146 394 1.1E-141 T 12-10-2018 PA257_6135 cce2a82efb6ba76a14b66e80489b0f3b 421 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 5.7E-180 T 12-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like PA257_6135 cce2a82efb6ba76a14b66e80489b0f3b 421 SUPERFAMILY SSF53822 30 408 9.42E-94 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_6135 cce2a82efb6ba76a14b66e80489b0f3b 421 Pfam PF13433 Periplasmic binding protein domain 31 407 1.1E-174 T 12-10-2018 PA257_4105 bb1da7b0e1322156bbfe024f1ce6c899 242 SUPERFAMILY SSF81606 7 241 3.4E-60 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_4105 bb1da7b0e1322156bbfe024f1ce6c899 242 SMART SM00331 13 242 3.0E-27 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_4105 bb1da7b0e1322156bbfe024f1ce6c899 242 Gene3D G3DSA:3.60.40.10 1 242 1.6E-59 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_4105 bb1da7b0e1322156bbfe024f1ce6c899 242 SMART SM00332 4 240 5.5E-28 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_4105 bb1da7b0e1322156bbfe024f1ce6c899 242 Pfam PF13672 Protein phosphatase 2C 18 202 5.3E-15 T 12-10-2018 PA257_1010 05fd89ca047723a2985a0b61b7a9fecb 85 Pfam PF13272 Putative 2/3 transmembrane domain holin 1 56 5.0E-19 T 12-10-2018 IPR025140 Putative 2/3 transmembrane domain holin PA257_6025 05fd89ca047723a2985a0b61b7a9fecb 85 Pfam PF13272 Putative 2/3 transmembrane domain holin 1 56 5.0E-19 T 12-10-2018 IPR025140 Putative 2/3 transmembrane domain holin PA257_2198 fbda5180177b7d91178cbe10925e6701 237 SUPERFAMILY SSF54523 39 204 3.09E-46 T 12-10-2018 PA257_2198 fbda5180177b7d91178cbe10925e6701 237 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 5 199 1.3E-92 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 PA257_2198 fbda5180177b7d91178cbe10925e6701 237 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2198 fbda5180177b7d91178cbe10925e6701 237 Pfam PF11612 Type II secretion system (T2SS), protein J 57 197 4.0E-45 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 PA257_2198 fbda5180177b7d91178cbe10925e6701 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.1E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2198 fbda5180177b7d91178cbe10925e6701 237 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 5.8E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_2198 fbda5180177b7d91178cbe10925e6701 237 Gene3D G3DSA:3.10.610.10 36 143 1.1E-31 T 12-10-2018 PA257_2198 fbda5180177b7d91178cbe10925e6701 237 SUPERFAMILY SSF54523 7 47 2.67E-5 T 12-10-2018 PA257_4898 147e954a40a99554b42cab23c0b35beb 77 Pfam PF13192 Thioredoxin domain 5 66 1.9E-7 T 12-10-2018 IPR012336 Thioredoxin-like fold PA257_4898 147e954a40a99554b42cab23c0b35beb 77 Gene3D G3DSA:3.40.30.10 1 77 5.9E-21 T 12-10-2018 PA257_4898 147e954a40a99554b42cab23c0b35beb 77 SUPERFAMILY SSF52833 2 76 2.11E-9 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_0194 fde57cadd89d3e454ad76cbdc711b4d7 221 Pfam PF08362 YcdC-like protein, C-terminal region 75 216 1.7E-53 T 12-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PA257_0194 fde57cadd89d3e454ad76cbdc711b4d7 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 5.6E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0194 fde57cadd89d3e454ad76cbdc711b4d7 221 Gene3D G3DSA:1.10.10.60 8 74 7.3E-20 T 12-10-2018 PA257_0194 fde57cadd89d3e454ad76cbdc711b4d7 221 SUPERFAMILY SSF48498 92 216 2.19E-43 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_0194 fde57cadd89d3e454ad76cbdc711b4d7 221 SUPERFAMILY SSF46689 16 95 6.67E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0194 fde57cadd89d3e454ad76cbdc711b4d7 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 1.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0194 fde57cadd89d3e454ad76cbdc711b4d7 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 1.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0194 fde57cadd89d3e454ad76cbdc711b4d7 221 Gene3D G3DSA:1.10.357.10 75 215 3.5E-51 T 12-10-2018 PA257_0199 90f74b460f27b804542047bd2148dcb2 663 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 466 663 1.1E-24 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_0199 90f74b460f27b804542047bd2148dcb2 663 SMART SM00304 337 389 4.0E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_0199 90f74b460f27b804542047bd2148dcb2 663 SUPERFAMILY SSF81606 448 659 4.71E-6 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_0199 90f74b460f27b804542047bd2148dcb2 663 SUPERFAMILY SSF158472 337 386 1.01E-9 T 12-10-2018 PA257_0199 90f74b460f27b804542047bd2148dcb2 663 SMART SM00331 453 662 1.4E-9 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_0199 90f74b460f27b804542047bd2148dcb2 663 Gene3D G3DSA:1.20.1480.50 306 396 6.2E-14 T 12-10-2018 PA257_0199 90f74b460f27b804542047bd2148dcb2 663 Gene3D G3DSA:3.60.40.10 404 661 4.6E-53 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_0199 90f74b460f27b804542047bd2148dcb2 663 Pfam PF00672 HAMP domain 337 386 1.1E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_4911 c1cae8a46e6e13d2ff760b3d1e6afdaf 253 Gene3D G3DSA:1.10.10.10 152 252 1.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4911 c1cae8a46e6e13d2ff760b3d1e6afdaf 253 SMART SM00862 172 249 5.8E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_4911 c1cae8a46e6e13d2ff760b3d1e6afdaf 253 SUPERFAMILY SSF52172 21 192 2.42E-39 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4911 c1cae8a46e6e13d2ff760b3d1e6afdaf 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 178 249 3.0E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_4911 c1cae8a46e6e13d2ff760b3d1e6afdaf 253 SUPERFAMILY SSF46894 168 249 1.38E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_4911 c1cae8a46e6e13d2ff760b3d1e6afdaf 253 SMART SM00448 23 133 1.1E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4911 c1cae8a46e6e13d2ff760b3d1e6afdaf 253 Pfam PF00072 Response regulator receiver domain 26 133 1.6E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4911 c1cae8a46e6e13d2ff760b3d1e6afdaf 253 Gene3D G3DSA:3.40.50.2300 9 141 3.6E-35 T 12-10-2018 PA257_0270 5152747d19382ee65d1a514285e5fee4 214 Gene3D G3DSA:1.10.357.10 18 214 3.8E-62 T 12-10-2018 PA257_0270 5152747d19382ee65d1a514285e5fee4 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0270 5152747d19382ee65d1a514285e5fee4 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0270 5152747d19382ee65d1a514285e5fee4 214 SUPERFAMILY SSF46689 9 83 9.75E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0270 5152747d19382ee65d1a514285e5fee4 214 SUPERFAMILY SSF48498 88 213 6.67E-34 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_0270 5152747d19382ee65d1a514285e5fee4 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 5.8E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1811 a07aa27091b66e6bc2cc2096c1af2a99 589 Gene3D G3DSA:3.60.20.10 3 185 1.8E-56 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_1811 a07aa27091b66e6bc2cc2096c1af2a99 589 PIRSF PIRSF001589 1 589 1.2E-204 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PA257_1811 a07aa27091b66e6bc2cc2096c1af2a99 589 SUPERFAMILY SSF52402 234 562 9.04E-72 T 12-10-2018 PA257_1811 a07aa27091b66e6bc2cc2096c1af2a99 589 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 519 2.6E-118 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PA257_1811 a07aa27091b66e6bc2cc2096c1af2a99 589 SUPERFAMILY SSF56235 1 224 2.74E-60 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_1811 a07aa27091b66e6bc2cc2096c1af2a99 589 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 586 0.0 T 12-10-2018 IPR017535 Asparagine synthase family amidotransferase PA257_1811 a07aa27091b66e6bc2cc2096c1af2a99 589 Pfam PF13537 Glutamine amidotransferase domain 47 166 3.1E-43 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PA257_1811 a07aa27091b66e6bc2cc2096c1af2a99 589 Pfam PF00733 Asparagine synthase 246 584 1.6E-80 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PA257_0348 9e24c29ec88ddfa43963f5ef4e5e523a 60 Pfam PF10055 Uncharacterized small protein (DUF2292) 17 52 1.2E-17 T 12-10-2018 IPR018743 Protein of unknown function DUF2292 PA257_2054 28ae8211c0fac0661f30a16ebf968d75 270 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 16 259 5.4E-60 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PA257_2054 28ae8211c0fac0661f30a16ebf968d75 270 Gene3D G3DSA:3.40.190.100 98 204 6.6E-91 T 12-10-2018 PA257_2054 28ae8211c0fac0661f30a16ebf968d75 270 Gene3D G3DSA:3.40.190.10 16 269 6.6E-91 T 12-10-2018 PA257_2054 28ae8211c0fac0661f30a16ebf968d75 270 SUPERFAMILY SSF53850 8 269 1.38E-73 T 12-10-2018 PA257_5534 b1a2478387312fb65a670dc47730f730 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 83 2.2E-25 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_5534 b1a2478387312fb65a670dc47730f730 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PA257_5534 b1a2478387312fb65a670dc47730f730 90 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.9E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_5534 b1a2478387312fb65a670dc47730f730 90 PRINTS PR00107 Phosphocarrier protein signature 54 71 5.9E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_5534 b1a2478387312fb65a670dc47730f730 90 PRINTS PR00107 Phosphocarrier protein signature 39 54 5.9E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_5534 b1a2478387312fb65a670dc47730f730 90 SUPERFAMILY SSF55594 1 88 2.22E-26 T 12-10-2018 IPR035895 HPr-like superfamily PA257_5534 b1a2478387312fb65a670dc47730f730 90 Gene3D G3DSA:3.30.1340.10 1 89 7.0E-28 T 12-10-2018 IPR035895 HPr-like superfamily PA257_5534 b1a2478387312fb65a670dc47730f730 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PA257_5534 b1a2478387312fb65a670dc47730f730 90 Pfam PF00381 PTS HPr component phosphorylation site 5 83 3.5E-26 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like PA257_2872 d0aa17a24e333adc161a129f77dc0907 324 SMART SM00829 11 322 7.8E-14 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_2872 d0aa17a24e333adc161a129f77dc0907 324 SUPERFAMILY SSF51735 112 270 4.71E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2872 d0aa17a24e333adc161a129f77dc0907 324 Gene3D G3DSA:3.90.180.10 12 318 9.7E-98 T 12-10-2018 PA257_2872 d0aa17a24e333adc161a129f77dc0907 324 Pfam PF00107 Zinc-binding dehydrogenase 151 256 4.3E-21 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PA257_2872 d0aa17a24e333adc161a129f77dc0907 324 SUPERFAMILY SSF50129 10 141 1.35E-33 T 12-10-2018 IPR011032 GroES-like superfamily PA257_2872 d0aa17a24e333adc161a129f77dc0907 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 1.9E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_2872 d0aa17a24e333adc161a129f77dc0907 324 Gene3D G3DSA:3.40.50.720 123 268 9.7E-98 T 12-10-2018 PA257_1727 083e9a937b6cb5b95fd071bcfac63679 295 Pfam PF01522 Polysaccharide deacetylase 15 170 1.0E-13 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 PA257_1727 083e9a937b6cb5b95fd071bcfac63679 295 SUPERFAMILY SSF88713 14 270 1.84E-30 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PA257_1727 083e9a937b6cb5b95fd071bcfac63679 295 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 295 65.573 T 12-10-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 PA257_4185 ac5e0b5d6cbaf8f24c298a159b88ba04 241 Gene3D G3DSA:3.40.50.1820 1 241 1.3E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4185 ac5e0b5d6cbaf8f24c298a159b88ba04 241 Pfam PF01738 Dienelactone hydrolase family 29 239 2.5E-41 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 PA257_4185 ac5e0b5d6cbaf8f24c298a159b88ba04 241 SUPERFAMILY SSF53474 6 238 4.9E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4378 c477475fc5fb9d0bb289068ad3895537 460 Gene3D G3DSA:3.30.70.2190 220 334 1.2E-27 T 12-10-2018 PA257_4378 c477475fc5fb9d0bb289068ad3895537 460 Gene3D G3DSA:3.30.465.40 6 219 1.3E-57 T 12-10-2018 PA257_4378 c477475fc5fb9d0bb289068ad3895537 460 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 458 2.8E-55 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PA257_4378 c477475fc5fb9d0bb289068ad3895537 460 Gene3D G3DSA:1.10.45.10 419 459 1.8E-15 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PA257_4378 c477475fc5fb9d0bb289068ad3895537 460 SUPERFAMILY SSF56176 5 213 6.87E-55 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_4378 c477475fc5fb9d0bb289068ad3895537 460 Gene3D G3DSA:3.30.70.2740 338 418 1.2E-13 T 12-10-2018 PA257_4378 c477475fc5fb9d0bb289068ad3895537 460 SUPERFAMILY SSF55103 190 459 9.32E-46 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PA257_4378 c477475fc5fb9d0bb289068ad3895537 460 Pfam PF01565 FAD binding domain 42 175 9.6E-33 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PA257_4420 8a08b1daef3e82c755d942a01f94f019 577 PIRSF PIRSF000719 1 577 2.5E-299 T 12-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PA257_4420 8a08b1daef3e82c755d942a01f94f019 577 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 10 569 3.3E-240 T 12-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PA257_4420 8a08b1daef3e82c755d942a01f94f019 577 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 2 573 44.505 T 12-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PA257_4420 8a08b1daef3e82c755d942a01f94f019 577 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 10 566 0.0 T 12-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PA257_4247 845a7143cf128ffbfd4f4c5561493ea2 122 Pfam PF00893 Small Multidrug Resistance protein 3 93 2.4E-23 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 PA257_4247 845a7143cf128ffbfd4f4c5561493ea2 122 SUPERFAMILY SSF103481 5 105 3.66E-16 T 12-10-2018 PA257_4247 845a7143cf128ffbfd4f4c5561493ea2 122 Gene3D G3DSA:1.10.3730.20 1 109 3.5E-30 T 12-10-2018 PA257_0558 8408a7e66db378749f056b80172fee00 189 SUPERFAMILY SSF81342 4 181 4.55E-42 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PA257_0558 8408a7e66db378749f056b80172fee00 189 Pfam PF01292 Prokaryotic cytochrome b561 9 180 1.3E-31 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 Gene3D G3DSA:2.60.40.10 155 247 1.7E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 239 1.5E-12 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 150 2.8E-41 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 132 147 2.3E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 106 123 2.3E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 171 186 2.3E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 78 99 2.3E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 29 38 2.3E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 SUPERFAMILY SSF49584 154 246 2.88E-13 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 SUPERFAMILY SSF49354 24 150 1.41E-39 T 12-10-2018 IPR008962 PapD-like superfamily PA257_3602 67014f6fa2154d5fe1d9a633a2d9926f 248 Gene3D G3DSA:2.60.40.10 30 151 1.1E-39 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_6179 400e631d82f24394a9b40d00163e84af 549 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PA257_6179 400e631d82f24394a9b40d00163e84af 549 SUPERFAMILY SSF52518 25 191 5.59E-39 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_6179 400e631d82f24394a9b40d00163e84af 549 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 213 346 2.8E-17 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PA257_6179 400e631d82f24394a9b40d00163e84af 549 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 403 542 6.7E-29 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PA257_6179 400e631d82f24394a9b40d00163e84af 549 Gene3D G3DSA:3.40.50.970 365 546 6.3E-54 T 12-10-2018 PA257_6179 400e631d82f24394a9b40d00163e84af 549 Gene3D G3DSA:3.40.50.1220 203 362 2.4E-36 T 12-10-2018 PA257_6179 400e631d82f24394a9b40d00163e84af 549 Gene3D G3DSA:3.40.50.970 22 200 7.1E-58 T 12-10-2018 PA257_6179 400e631d82f24394a9b40d00163e84af 549 SUPERFAMILY SSF52467 206 362 5.61E-62 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_6179 400e631d82f24394a9b40d00163e84af 549 SUPERFAMILY SSF52518 372 546 1.22E-47 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_6179 400e631d82f24394a9b40d00163e84af 549 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 24 189 3.7E-42 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PA257_5434 b1890bbc84f5eefd09bb1ac704f70578 190 Pfam PF04011 LemA family 9 185 5.1E-57 T 12-10-2018 IPR007156 LemA PA257_5434 b1890bbc84f5eefd09bb1ac704f70578 190 SUPERFAMILY SSF140478 26 177 3.01E-45 T 12-10-2018 IPR023353 LemA-like domain superfamily PA257_5434 b1890bbc84f5eefd09bb1ac704f70578 190 Gene3D G3DSA:1.20.1440.20 16 185 2.6E-50 T 12-10-2018 IPR023353 LemA-like domain superfamily PA257_3503 b7c953f1c48f09d9a0fc68023b5d8678 549 Pfam PF00501 AMP-binding enzyme 27 443 1.1E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3503 b7c953f1c48f09d9a0fc68023b5d8678 549 Gene3D G3DSA:3.40.50.12780 7 438 1.2E-113 T 12-10-2018 PA257_3503 b7c953f1c48f09d9a0fc68023b5d8678 549 Gene3D G3DSA:3.30.300.310 439 544 2.3E-33 T 12-10-2018 PA257_3503 b7c953f1c48f09d9a0fc68023b5d8678 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3503 b7c953f1c48f09d9a0fc68023b5d8678 549 SUPERFAMILY SSF56801 16 540 2.35E-144 T 12-10-2018 PA257_3503 b7c953f1c48f09d9a0fc68023b5d8678 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 528 6.6E-21 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_0175 4587dfd91c651b1a5f3478630817cc8b 195 Gene3D G3DSA:1.10.10.10 101 184 4.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0175 4587dfd91c651b1a5f3478630817cc8b 195 SUPERFAMILY SSF88659 102 183 5.42E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_0175 4587dfd91c651b1a5f3478630817cc8b 195 Pfam PF08281 Sigma-70, region 4 127 178 5.1E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_0175 4587dfd91c651b1a5f3478630817cc8b 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 179 6.7E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_0175 4587dfd91c651b1a5f3478630817cc8b 195 Gene3D G3DSA:1.10.1740.10 17 91 1.3E-8 T 12-10-2018 PA257_0175 4587dfd91c651b1a5f3478630817cc8b 195 Pfam PF04542 Sigma-70 region 2 35 95 1.0E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_0175 4587dfd91c651b1a5f3478630817cc8b 195 SUPERFAMILY SSF88946 31 107 1.73E-13 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_5911 6284e4a489e69814997e6dede134a139 774 PIRSF PIRSF002799 1 774 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5911 6284e4a489e69814997e6dede134a139 774 Gene3D G3DSA:3.30.2060.10 69 157 8.8E-272 T 12-10-2018 PA257_5911 6284e4a489e69814997e6dede134a139 774 Gene3D G3DSA:1.10.3810.10 158 361 8.8E-272 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5911 6284e4a489e69814997e6dede134a139 774 Pfam PF14814 Bifunctional transglycosylase second domain 71 154 1.4E-24 T 12-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5911 6284e4a489e69814997e6dede134a139 774 SUPERFAMILY SSF56601 319 756 4.7E-119 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_5911 6284e4a489e69814997e6dede134a139 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 431 659 8.2E-18 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PA257_5911 6284e4a489e69814997e6dede134a139 774 Pfam PF00912 Transglycosylase 166 336 5.7E-57 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5911 6284e4a489e69814997e6dede134a139 774 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 26 752 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5911 6284e4a489e69814997e6dede134a139 774 Gene3D G3DSA:3.40.710.10 61 719 8.8E-272 T 12-10-2018 PA257_5911 6284e4a489e69814997e6dede134a139 774 SUPERFAMILY SSF53955 163 360 3.94E-66 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_3882 883806150f0c8f756d3cd7d69733e398 776 Gene3D G3DSA:3.30.1370.120 200 271 1.7E-12 T 12-10-2018 IPR038591 NolW-like superfamily PA257_3882 883806150f0c8f756d3cd7d69733e398 776 Gene3D G3DSA:3.30.1370.120 273 350 8.1E-13 T 12-10-2018 IPR038591 NolW-like superfamily PA257_3882 883806150f0c8f756d3cd7d69733e398 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 561 579 5.2E-38 T 12-10-2018 IPR001775 GspD/PilQ family PA257_3882 883806150f0c8f756d3cd7d69733e398 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 584 598 5.2E-38 T 12-10-2018 IPR001775 GspD/PilQ family PA257_3882 883806150f0c8f756d3cd7d69733e398 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 460 470 5.2E-38 T 12-10-2018 IPR001775 GspD/PilQ family PA257_3882 883806150f0c8f756d3cd7d69733e398 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 352 362 5.2E-38 T 12-10-2018 IPR001775 GspD/PilQ family PA257_3882 883806150f0c8f756d3cd7d69733e398 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 425 449 5.2E-38 T 12-10-2018 IPR001775 GspD/PilQ family PA257_3882 883806150f0c8f756d3cd7d69733e398 776 Gene3D G3DSA:3.30.1370.120 44 198 1.8E-50 T 12-10-2018 IPR038591 NolW-like superfamily PA257_3882 883806150f0c8f756d3cd7d69733e398 776 Pfam PF00263 Bacterial type II and III secretion system protein 429 597 9.3E-52 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 PA257_3882 883806150f0c8f756d3cd7d69733e398 776 Gene3D G3DSA:3.30.70.1070 687 770 6.6E-8 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_3882 883806150f0c8f756d3cd7d69733e398 776 Pfam PF03958 Bacterial type II/III secretion system short domain 277 352 7.5E-14 T 12-10-2018 IPR005644 NolW-like PA257_3882 883806150f0c8f756d3cd7d69733e398 776 Pfam PF03958 Bacterial type II/III secretion system short domain 206 271 3.3E-10 T 12-10-2018 IPR005644 NolW-like PA257_3882 883806150f0c8f756d3cd7d69733e398 776 Pfam PF03958 Bacterial type II/III secretion system short domain 141 200 2.3E-8 T 12-10-2018 IPR005644 NolW-like PA257_3882 883806150f0c8f756d3cd7d69733e398 776 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 48 605 6.3E-157 T 12-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 PA257_2496 0baa82ae484d883ccd19ac2f6e82239d 220 SUPERFAMILY SSF47616 78 209 1.91E-26 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_2496 0baa82ae484d883ccd19ac2f6e82239d 220 SUPERFAMILY SSF52833 1 102 1.7E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2496 0baa82ae484d883ccd19ac2f6e82239d 220 Pfam PF14497 Glutathione S-transferase, C-terminal domain 129 204 1.7E-12 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_2496 0baa82ae484d883ccd19ac2f6e82239d 220 Gene3D G3DSA:3.40.30.10 8 204 8.6E-56 T 12-10-2018 PA257_2496 0baa82ae484d883ccd19ac2f6e82239d 220 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 79 1.4E-25 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_2496 0baa82ae484d883ccd19ac2f6e82239d 220 Gene3D G3DSA:1.20.1050.10 81 199 8.6E-56 T 12-10-2018 PA257_3257 2c3e1f80da236138b000ea9c5d6264cf 306 Gene3D G3DSA:3.40.190.10 165 262 2.7E-36 T 12-10-2018 PA257_3257 2c3e1f80da236138b000ea9c5d6264cf 306 SUPERFAMILY SSF53850 97 294 4.71E-26 T 12-10-2018 PA257_3257 2c3e1f80da236138b000ea9c5d6264cf 306 Gene3D G3DSA:1.10.10.10 10 94 4.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3257 2c3e1f80da236138b000ea9c5d6264cf 306 Pfam PF03466 LysR substrate binding domain 95 289 5.8E-23 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3257 2c3e1f80da236138b000ea9c5d6264cf 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 3.3E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3257 2c3e1f80da236138b000ea9c5d6264cf 306 SUPERFAMILY SSF46785 5 118 8.17E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3257 2c3e1f80da236138b000ea9c5d6264cf 306 Gene3D G3DSA:3.40.190.10 107 286 2.7E-36 T 12-10-2018 PA257_2384 b161a47bb32b51e83a9da04d693a6746 255 Gene3D G3DSA:3.40.50.300 2 254 1.7E-76 T 12-10-2018 PA257_2384 b161a47bb32b51e83a9da04d693a6746 255 SMART SM00382 28 227 1.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2384 b161a47bb32b51e83a9da04d693a6746 255 SUPERFAMILY SSF52540 4 249 5.1E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2384 b161a47bb32b51e83a9da04d693a6746 255 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2384 b161a47bb32b51e83a9da04d693a6746 255 Pfam PF00005 ABC transporter 19 179 2.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_2384 b161a47bb32b51e83a9da04d693a6746 255 PIRSF PIRSF039085 1 255 1.6E-114 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PA257_4052 a405078732ab1131c91c51848439b9a2 107 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 21 107 2.5E-27 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 PA257_4052 a405078732ab1131c91c51848439b9a2 107 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 69 107 8.3E-21 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 PA257_5971 306a4f9aa56417f11316bbc92d543ffb 135 Pfam PF13664 Domain of unknown function (DUF4149) 13 97 1.7E-5 T 12-10-2018 IPR025423 Domain of unknown function DUF4149 PA257_6483 a52c152aea41c9ce4a97265f0372767f 109 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 18 96 1.2E-11 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative PA257_2805 761e016f7de0a46015df984278527fe3 792 SUPERFAMILY SSF55681 467 683 8.45E-54 T 12-10-2018 PA257_2805 761e016f7de0a46015df984278527fe3 792 Gene3D G3DSA:3.30.930.10 485 690 4.3E-66 T 12-10-2018 PA257_2805 761e016f7de0a46015df984278527fe3 792 SMART SM00874 402 471 1.8E-27 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PA257_2805 761e016f7de0a46015df984278527fe3 792 Gene3D G3DSA:2.40.50.140 39 153 3.2E-73 T 12-10-2018 PA257_2805 761e016f7de0a46015df984278527fe3 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 7.5E-31 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 PA257_2805 761e016f7de0a46015df984278527fe3 792 SMART SM00896 698 791 1.9E-46 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 PA257_2805 761e016f7de0a46015df984278527fe3 792 SUPERFAMILY SSF50249 39 190 2.08E-49 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2805 761e016f7de0a46015df984278527fe3 792 Pfam PF03484 tRNA synthetase B5 domain 405 471 4.6E-19 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PA257_2805 761e016f7de0a46015df984278527fe3 792 SUPERFAMILY SSF56037 195 394 1.73E-74 T 12-10-2018 PA257_2805 761e016f7de0a46015df984278527fe3 792 Gene3D G3DSA:3.30.56.10 400 475 3.3E-28 T 12-10-2018 PA257_2805 761e016f7de0a46015df984278527fe3 792 Gene3D G3DSA:3.30.70.380 699 792 3.0E-33 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 PA257_2805 761e016f7de0a46015df984278527fe3 792 SUPERFAMILY SSF46955 403 475 8.33E-18 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_2805 761e016f7de0a46015df984278527fe3 792 SUPERFAMILY SSF54991 692 791 2.09E-32 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 PA257_2805 761e016f7de0a46015df984278527fe3 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 46.973 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PA257_2805 761e016f7de0a46015df984278527fe3 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 8.3E-259 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PA257_2805 761e016f7de0a46015df984278527fe3 792 Gene3D G3DSA:3.30.56.10 4 181 3.2E-73 T 12-10-2018 PA257_2805 761e016f7de0a46015df984278527fe3 792 Pfam PF03483 B3/4 domain 211 383 3.8E-70 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PA257_2805 761e016f7de0a46015df984278527fe3 792 Pfam PF01588 Putative tRNA binding domain 45 144 1.2E-24 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PA257_2805 761e016f7de0a46015df984278527fe3 792 Gene3D G3DSA:3.50.40.10 196 394 1.1E-80 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 PA257_2805 761e016f7de0a46015df984278527fe3 792 SMART SM00873 211 384 5.2E-95 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PA257_5578 ac671e74e2c551619bcc51b5162eb5d8 210 PIRSF PIRSF006324 2 209 5.2E-56 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_5578 ac671e74e2c551619bcc51b5162eb5d8 210 Pfam PF01810 LysE type translocator 12 206 1.7E-37 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_1081 73338df551e2885ab9ece3ba10ad9bc8 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 243 3.9E-66 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_1081 73338df551e2885ab9ece3ba10ad9bc8 309 Gene3D G3DSA:3.90.25.10 174 305 8.2E-97 T 12-10-2018 PA257_1081 73338df551e2885ab9ece3ba10ad9bc8 309 Gene3D G3DSA:3.40.50.720 7 297 8.2E-97 T 12-10-2018 PA257_1081 73338df551e2885ab9ece3ba10ad9bc8 309 SUPERFAMILY SSF51735 5 306 2.64E-90 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2483 bf052a0fb56a586b86578fd2937a959a 305 Pfam PF03466 LysR substrate binding domain 98 291 1.9E-16 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2483 bf052a0fb56a586b86578fd2937a959a 305 Gene3D G3DSA:3.40.190.10 88 286 8.6E-48 T 12-10-2018 PA257_2483 bf052a0fb56a586b86578fd2937a959a 305 Gene3D G3DSA:3.40.190.10 163 262 8.6E-48 T 12-10-2018 PA257_2483 bf052a0fb56a586b86578fd2937a959a 305 Gene3D G3DSA:1.10.10.10 1 81 1.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2483 bf052a0fb56a586b86578fd2937a959a 305 SUPERFAMILY SSF46785 2 78 8.16E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2483 bf052a0fb56a586b86578fd2937a959a 305 SUPERFAMILY SSF53850 88 290 3.98E-31 T 12-10-2018 PA257_2483 bf052a0fb56a586b86578fd2937a959a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 59 4.7E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6434 d115299fa9442ae24ea8a295734fe41e 256 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 49.365 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 PA257_6434 d115299fa9442ae24ea8a295734fe41e 256 SUPERFAMILY SSF51366 3 256 2.67E-84 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PA257_6434 d115299fa9442ae24ea8a295734fe41e 256 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 1.9E-117 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 PA257_6434 d115299fa9442ae24ea8a295734fe41e 256 Gene3D G3DSA:3.20.20.70 1 256 2.7E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_6434 d115299fa9442ae24ea8a295734fe41e 256 Pfam PF00977 Histidine biosynthesis protein 6 240 1.3E-92 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 PA257_4583 cfc9d9e5f8ed272db92efde8d3f30483 121 Gene3D G3DSA:3.40.50.360 60 121 4.3E-5 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_1806 f79f165ed6923b7a5dd8a32f733bf73a 441 Gene3D G3DSA:1.10.575.10 201 288 1.5E-5 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 PA257_1806 f79f165ed6923b7a5dd8a32f733bf73a 441 SUPERFAMILY SSF48537 147 366 1.06E-38 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 Pfam PF02540 NAD synthase 221 293 3.3E-8 T 12-10-2018 IPR022310 NAD/GMP synthase PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 214 527 3.3E-149 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 Gene3D G3DSA:3.40.50.880 11 208 9.0E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 Gene3D G3DSA:3.40.50.620 211 407 5.9E-77 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 SUPERFAMILY SSF52317 9 239 1.02E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 Pfam PF00958 GMP synthase C terminal domain 435 526 9.1E-41 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 Pfam PF00117 Glutamine amidotransferase class-I 14 202 5.2E-36 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 PRINTS PR00097 Anthranilate synthase component II signature 56 65 1.5E-5 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 PRINTS PR00097 Anthranilate synthase component II signature 179 192 1.5E-5 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 PRINTS PR00097 Anthranilate synthase component II signature 83 94 1.5E-5 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 Gene3D G3DSA:3.30.300.10 408 527 4.2E-50 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 SUPERFAMILY SSF54810 407 527 3.4E-49 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 206 7.3E-77 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 8.9E-5 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 8.9E-5 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 8.9E-5 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 527 55.92 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 PRINTS PR00096 Glutamine amidotransferase superfamily signature 179 192 5.1E-7 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 5.1E-7 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 5.1E-7 T 12-10-2018 PA257_1402 4cdcaf086a5f077055186535e4f520b9 527 SUPERFAMILY SSF52402 199 422 9.92E-59 T 12-10-2018 PA257_0020 c658128cbff94e2d02c1c917b21384e0 183 Pfam PF03352 Methyladenine glycosylase 6 177 1.0E-69 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 PA257_0020 c658128cbff94e2d02c1c917b21384e0 183 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 3 178 1.7E-88 T 12-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 PA257_0020 c658128cbff94e2d02c1c917b21384e0 183 SUPERFAMILY SSF48150 1 181 1.7E-74 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PA257_0020 c658128cbff94e2d02c1c917b21384e0 183 Gene3D G3DSA:1.10.340.30 1 181 1.1E-74 T 12-10-2018 PA257_6276 fa6c8c75d72b4a90258c7d87993d1547 425 SUPERFAMILY SSF53756 54 413 2.51E-17 T 12-10-2018 PA257_6276 fa6c8c75d72b4a90258c7d87993d1547 425 Gene3D G3DSA:3.40.50.2000 218 404 1.1E-69 T 12-10-2018 PA257_6276 fa6c8c75d72b4a90258c7d87993d1547 425 Gene3D G3DSA:3.40.50.11720 34 209 2.8E-49 T 12-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 PA257_6276 fa6c8c75d72b4a90258c7d87993d1547 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 210 3.1E-67 T 12-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 PA257_6563 874ddc4b40f864ff6b4874081bae984e 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 2.0E-28 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain PA257_3485 41479418350853e6d934175b0faae3ba 320 Pfam PF14870 Photosynthesis system II assembly factor YCF48 76 206 3.1E-16 T 12-10-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain PA257_3485 41479418350853e6d934175b0faae3ba 320 Gene3D G3DSA:2.130.10.10 127 310 1.1E-9 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_3485 41479418350853e6d934175b0faae3ba 320 Gene3D G3DSA:2.130.10.10 26 126 1.7E-5 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_3485 41479418350853e6d934175b0faae3ba 320 SUPERFAMILY SSF110296 34 288 1.75E-48 T 12-10-2018 PA257_6451 4cf7d99660ae34415f554bbff6a72bcf 231 Gene3D G3DSA:1.10.3720.10 4 227 4.7E-52 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6451 4cf7d99660ae34415f554bbff6a72bcf 231 SUPERFAMILY SSF161098 11 208 1.74E-40 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6451 4cf7d99660ae34415f554bbff6a72bcf 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 117 1.7E-17 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_6451 4cf7d99660ae34415f554bbff6a72bcf 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 221 1.1E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_4894 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 SUPERFAMILY SSF56042 172 338 3.59E-62 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PA257_4894 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 SUPERFAMILY SSF55326 8 171 2.09E-51 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PA257_4894 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 165 3.1E-15 T 12-10-2018 IPR016188 PurM-like, N-terminal domain PA257_4894 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 Gene3D G3DSA:3.30.1330.10 7 171 5.3E-66 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PA257_4894 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 337 6.9E-39 T 12-10-2018 IPR010918 PurM-like, C-terminal domain PA257_4894 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 336 2.4E-142 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_4894 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 Gene3D G3DSA:3.90.650.10 172 347 1.5E-68 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PA257_4894 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 347 45.693 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PA257_0144 fef39cae6126816be238cb233cc6b198 244 SUPERFAMILY SSF48008 87 217 2.88E-21 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_0144 fef39cae6126816be238cb233cc6b198 244 Gene3D G3DSA:1.10.10.10 3 81 1.0E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0144 fef39cae6126816be238cb233cc6b198 244 SMART SM00895 89 212 1.1E-15 T 12-10-2018 IPR011711 GntR, C-terminal PA257_0144 fef39cae6126816be238cb233cc6b198 244 Gene3D G3DSA:1.20.120.530 82 219 6.8E-21 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_0144 fef39cae6126816be238cb233cc6b198 244 Pfam PF07729 FCD domain 89 210 1.1E-16 T 12-10-2018 IPR011711 GntR, C-terminal PA257_0144 fef39cae6126816be238cb233cc6b198 244 SUPERFAMILY SSF46785 16 83 2.38E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0144 fef39cae6126816be238cb233cc6b198 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 71 2.6E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_1889 4e0e24a9462c32c00550a26f478f0db3 278 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 250 8.5E-91 T 12-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 PA257_1889 4e0e24a9462c32c00550a26f478f0db3 278 Gene3D G3DSA:3.40.50.300 4 254 4.2E-63 T 12-10-2018 PA257_1889 4e0e24a9462c32c00550a26f478f0db3 278 SMART SM00382 29 238 9.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1889 4e0e24a9462c32c00550a26f478f0db3 278 SUPERFAMILY SSF52540 4 242 1.66E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1889 4e0e24a9462c32c00550a26f478f0db3 278 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1889 4e0e24a9462c32c00550a26f478f0db3 278 Pfam PF00005 ABC transporter 21 181 5.5E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1230 1b7e12a29b3ea6f65224d17a4c819b7d 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 259 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_1230 1b7e12a29b3ea6f65224d17a4c819b7d 277 Gene3D G3DSA:2.60.120.10 8 108 5.6E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1230 1b7e12a29b3ea6f65224d17a4c819b7d 277 SUPERFAMILY SSF46689 217 265 3.85E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1230 1b7e12a29b3ea6f65224d17a4c819b7d 277 Pfam PF02311 AraC-like ligand binding domain 27 93 6.7E-5 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_1230 1b7e12a29b3ea6f65224d17a4c819b7d 277 Pfam PF12833 Helix-turn-helix domain 190 265 7.2E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1230 1b7e12a29b3ea6f65224d17a4c819b7d 277 SMART SM00342 181 263 9.1E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1230 1b7e12a29b3ea6f65224d17a4c819b7d 277 Gene3D G3DSA:1.10.10.60 164 269 1.4E-19 T 12-10-2018 PA257_1230 1b7e12a29b3ea6f65224d17a4c819b7d 277 SUPERFAMILY SSF51182 22 188 7.41E-19 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_1390 dadd70bb4756120466cc825a34faf5d0 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 4.0E-116 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PA257_1390 dadd70bb4756120466cc825a34faf5d0 426 PIRSF PIRSF006066 1 426 7.2E-140 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PA257_1390 dadd70bb4756120466cc825a34faf5d0 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 416 9.7E-102 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PA257_0088 2accef315c41844a8dd8f6827f6d8110 352 Pfam PF04055 Radical SAM superfamily 67 245 2.9E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_0088 2accef315c41844a8dd8f6827f6d8110 352 SMART SM00729 63 288 9.4E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_0088 2accef315c41844a8dd8f6827f6d8110 352 Gene3D G3DSA:3.20.20.70 65 278 2.9E-9 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0088 2accef315c41844a8dd8f6827f6d8110 352 SUPERFAMILY SSF102114 48 261 2.22E-12 T 12-10-2018 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.7E-47 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.4E-39 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.4E-39 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.4E-39 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.4E-39 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.12 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.2E-60 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 Gene3D G3DSA:3.90.1170.10 1 137 1.2E-54 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0839 eea4470f9113d11957d63cc6a572200f 137 SUPERFAMILY SSF54686 1 134 4.19E-53 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 PA257_3769 dd1528026de2b0c3adb3209a60850948 567 Gene3D G3DSA:3.40.720.10 220 547 1.2E-84 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_3769 dd1528026de2b0c3adb3209a60850948 567 SUPERFAMILY SSF53649 234 535 4.14E-23 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_3769 dd1528026de2b0c3adb3209a60850948 567 Pfam PF00884 Sulfatase 233 521 8.3E-53 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PA257_3769 dd1528026de2b0c3adb3209a60850948 567 Pfam PF08019 Domain of unknown function (DUF1705) 54 203 3.0E-52 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 PA257_3412 6a6d4d0729204c42e719a3f2c654085a 662 Pfam PF13807 G-rich domain on putative tyrosine kinase 403 479 1.7E-6 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain PA257_3412 6a6d4d0729204c42e719a3f2c654085a 662 Gene3D G3DSA:3.40.50.300 558 649 1.6E-6 T 12-10-2018 PA257_1855 a1fe684f79c9540ce416d201c51716a4 333 Gene3D G3DSA:3.40.50.920 199 331 1.2E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_1855 a1fe684f79c9540ce416d201c51716a4 333 SMART SM00861 11 186 5.7E-59 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_1855 a1fe684f79c9540ce416d201c51716a4 333 SUPERFAMILY SSF52518 11 195 1.07E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_1855 a1fe684f79c9540ce416d201c51716a4 333 SUPERFAMILY SSF52922 197 331 4.19E-37 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_1855 a1fe684f79c9540ce416d201c51716a4 333 Gene3D G3DSA:3.40.50.970 8 198 4.3E-73 T 12-10-2018 PA257_1855 a1fe684f79c9540ce416d201c51716a4 333 Pfam PF02780 Transketolase, C-terminal domain 205 322 8.9E-35 T 12-10-2018 IPR033248 Transketolase, C-terminal domain PA257_1855 a1fe684f79c9540ce416d201c51716a4 333 Pfam PF02779 Transketolase, pyrimidine binding domain 12 186 6.7E-48 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_2350 436906dcdf3ef6daffc9e37f99b56ac3 298 SUPERFAMILY SSF102114 6 210 8.76E-32 T 12-10-2018 PA257_2350 436906dcdf3ef6daffc9e37f99b56ac3 298 Pfam PF04055 Radical SAM superfamily 27 185 2.2E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_2350 436906dcdf3ef6daffc9e37f99b56ac3 298 Gene3D G3DSA:3.20.20.70 21 205 3.1E-17 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2350 436906dcdf3ef6daffc9e37f99b56ac3 298 SMART SM00729 22 237 7.9E-30 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_4078 67e3000b2deb2eb7da280b08459caa00 158 Pfam PF07321 Type III secretion protein YscO 3 151 3.6E-45 T 12-10-2018 IPR009929 Type III secretion sytem,YscO PA257_4990 7ae98fe65c4f4f445c53cc8a1649b16d 212 Gene3D G3DSA:1.10.472.60 45 171 3.1E-69 T 12-10-2018 PA257_4990 7ae98fe65c4f4f445c53cc8a1649b16d 212 Pfam PF01323 DSBA-like thioredoxin domain 9 187 8.0E-15 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 PA257_4990 7ae98fe65c4f4f445c53cc8a1649b16d 212 SUPERFAMILY SSF52833 5 208 1.33E-40 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4990 7ae98fe65c4f4f445c53cc8a1649b16d 212 Gene3D G3DSA:3.40.30.10 8 198 3.1E-69 T 12-10-2018 PA257_3255 1049ad6f2661ea9d9b3dd421eb47071e 760 Gene3D G3DSA:2.30.120.10 290 364 9.7E-237 T 12-10-2018 PA257_3255 1049ad6f2661ea9d9b3dd421eb47071e 760 Pfam PF01804 Penicillin amidase 31 748 1.2E-143 T 12-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 PA257_3255 1049ad6f2661ea9d9b3dd421eb47071e 760 Gene3D G3DSA:3.60.20.10 215 747 9.7E-237 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_3255 1049ad6f2661ea9d9b3dd421eb47071e 760 Gene3D G3DSA:1.10.1400.10 507 688 9.7E-237 T 12-10-2018 PA257_3255 1049ad6f2661ea9d9b3dd421eb47071e 760 Gene3D G3DSA:1.10.439.10 26 190 1.0E-66 T 12-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 PA257_3255 1049ad6f2661ea9d9b3dd421eb47071e 760 SUPERFAMILY SSF56235 31 754 3.6E-184 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_3255 1049ad6f2661ea9d9b3dd421eb47071e 760 PIRSF PIRSF001227 174 757 2.4E-55 T 12-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 PA257_3255 1049ad6f2661ea9d9b3dd421eb47071e 760 PIRSF PIRSF001227 10 151 6.8E-14 T 12-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 PA257_5833 1033571216109fce47f5ef175da4b66c 427 Pfam PF00860 Permease family 12 378 1.1E-92 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PA257_5833 1033571216109fce47f5ef175da4b66c 427 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 327 347 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PA257_5833 1033571216109fce47f5ef175da4b66c 427 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 9 407 9.2E-111 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PA257_6853 02bd2ee0b4f24bb986b853e2231d6a15 304 Gene3D G3DSA:3.40.50.720 6 283 2.0E-76 T 12-10-2018 PA257_6853 02bd2ee0b4f24bb986b853e2231d6a15 304 Pfam PF16363 GDP-mannose 4,6 dehydratase 36 291 5.3E-49 T 12-10-2018 IPR016040 NAD(P)-binding domain PA257_6853 02bd2ee0b4f24bb986b853e2231d6a15 304 Gene3D G3DSA:3.90.25.10 167 290 2.0E-76 T 12-10-2018 PA257_6853 02bd2ee0b4f24bb986b853e2231d6a15 304 SUPERFAMILY SSF51735 4 299 2.08E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0201 00575e5dbbbc639c8231ad1de8d66cba 200 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 19 172 28.398 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 PA257_0201 00575e5dbbbc639c8231ad1de8d66cba 200 Gene3D G3DSA:3.30.1330.200 23 177 6.5E-51 T 12-10-2018 IPR038592 CheD-like superfamily PA257_0201 00575e5dbbbc639c8231ad1de8d66cba 200 Pfam PF03975 CheD chemotactic sensory transduction 66 168 1.9E-31 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 PA257_0201 00575e5dbbbc639c8231ad1de8d66cba 200 SUPERFAMILY SSF64438 24 169 1.1E-48 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic PA257_2324 7b60f349e2edc62aff1b7b793a8b2503 61 Pfam PF03966 Trm112p-like protein 2 41 4.1E-10 T 12-10-2018 IPR005651 Trm112-like PA257_2324 7b60f349e2edc62aff1b7b793a8b2503 61 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.286 T 12-10-2018 IPR038053 Uncharacterised protein family UPF0434 PA257_2324 7b60f349e2edc62aff1b7b793a8b2503 61 Gene3D G3DSA:2.20.25.10 8 61 3.4E-24 T 12-10-2018 PA257_2324 7b60f349e2edc62aff1b7b793a8b2503 61 SUPERFAMILY SSF158997 1 54 1.05E-20 T 12-10-2018 PA257_1444 2c4686bd6728212d604b2225740233bd 234 SUPERFAMILY SSF54427 94 226 5.26E-28 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_1444 2c4686bd6728212d604b2225740233bd 234 Gene3D G3DSA:3.10.450.230 99 226 4.2E-5 T 12-10-2018 PA257_1444 2c4686bd6728212d604b2225740233bd 234 Pfam PF04335 VirB8 protein 23 225 2.0E-70 T 12-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 PA257_3388 de25d1b97d739089ddc8643496eaab12 215 Gene3D G3DSA:1.10.760.10 120 213 2.0E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3388 de25d1b97d739089ddc8643496eaab12 215 SUPERFAMILY SSF46626 11 112 5.79E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3388 de25d1b97d739089ddc8643496eaab12 215 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 31 108 2.9E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3388 de25d1b97d739089ddc8643496eaab12 215 PIRSF PIRSF000005 2 215 8.9E-60 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 PA257_3388 de25d1b97d739089ddc8643496eaab12 215 Pfam PF00034 Cytochrome c 128 213 2.0E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3388 de25d1b97d739089ddc8643496eaab12 215 SUPERFAMILY SSF46626 123 212 2.06E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3388 de25d1b97d739089ddc8643496eaab12 215 Gene3D G3DSA:1.10.760.10 36 113 1.3E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3901 16cbf365d5811a6d634e254fd681a7d0 287 Gene3D G3DSA:1.10.10.10 1 83 2.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3901 16cbf365d5811a6d634e254fd681a7d0 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3901 16cbf365d5811a6d634e254fd681a7d0 287 Pfam PF03466 LysR substrate binding domain 87 273 1.2E-21 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3901 16cbf365d5811a6d634e254fd681a7d0 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3901 16cbf365d5811a6d634e254fd681a7d0 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3901 16cbf365d5811a6d634e254fd681a7d0 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3901 16cbf365d5811a6d634e254fd681a7d0 287 Gene3D G3DSA:3.40.190.10 85 174 9.7E-13 T 12-10-2018 PA257_3901 16cbf365d5811a6d634e254fd681a7d0 287 SUPERFAMILY SSF53850 87 275 2.02E-24 T 12-10-2018 PA257_3901 16cbf365d5811a6d634e254fd681a7d0 287 SUPERFAMILY SSF46785 1 109 1.27E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5034 fb12b8b419261ceb4c4286c8eebb5b77 139 Pfam PF16460 Phage tail tube, TTP, lambda-like 2 136 2.5E-71 T 12-10-2018 IPR032495 Phage tail tube protein, lambda-like PA257_5343 da1a89ee4e2e2eab4a6da816e5e4bbe2 1211 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1100 1169 2.4E-12 T 12-10-2018 PA257_5343 da1a89ee4e2e2eab4a6da816e5e4bbe2 1211 SUPERFAMILY SSF52540 1 288 1.9E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5343 da1a89ee4e2e2eab4a6da816e5e4bbe2 1211 Gene3D G3DSA:3.40.50.300 1 347 2.5E-38 T 12-10-2018 PA257_5343 da1a89ee4e2e2eab4a6da816e5e4bbe2 1211 SUPERFAMILY SSF52540 893 1203 7.62E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5343 da1a89ee4e2e2eab4a6da816e5e4bbe2 1211 Gene3D G3DSA:3.40.50.300 986 1211 3.6E-23 T 12-10-2018 PA257_5343 da1a89ee4e2e2eab4a6da816e5e4bbe2 1211 Pfam PF13476 AAA domain 6 330 7.3E-25 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain PA257_6256 8f0a4c67baa2854545b2329f38204e9d 627 Gene3D G3DSA:3.20.20.540 209 523 2.0E-153 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PA257_6256 8f0a4c67baa2854545b2329f38204e9d 627 Pfam PF01964 Radical SAM ThiC family 140 588 3.0E-200 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PA257_6256 8f0a4c67baa2854545b2329f38204e9d 627 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 591 3.2E-219 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PA257_6256 8f0a4c67baa2854545b2329f38204e9d 627 Pfam PF13667 ThiC-associated domain 22 99 6.9E-34 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PA257_6256 8f0a4c67baa2854545b2329f38204e9d 627 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 592 100.0 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PA257_4522 f40a8fabe61289b04c4eca5342ac0a99 324 Pfam PF00155 Aminotransferase class I and II 47 301 5.9E-31 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_4522 f40a8fabe61289b04c4eca5342ac0a99 324 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 182 195 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PA257_4522 f40a8fabe61289b04c4eca5342ac0a99 324 Gene3D G3DSA:3.90.1150.10 15 293 8.7E-52 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_4522 f40a8fabe61289b04c4eca5342ac0a99 324 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 1 315 8.5E-108 T 12-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 PA257_4522 f40a8fabe61289b04c4eca5342ac0a99 324 SUPERFAMILY SSF53383 5 306 1.64E-56 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_4522 f40a8fabe61289b04c4eca5342ac0a99 324 Gene3D G3DSA:3.40.640.10 27 230 8.7E-52 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_2609 cf06d11da3ae8f7a50cc74a07fee35c6 691 Pfam PF12696 TraM recognition site of TraD and TraG 467 594 2.8E-10 T 12-10-2018 IPR032689 TraD/TraG, TraM recognition site PA257_2609 cf06d11da3ae8f7a50cc74a07fee35c6 691 SUPERFAMILY SSF52540 104 616 1.58E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2609 cf06d11da3ae8f7a50cc74a07fee35c6 691 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 1 615 0.0 T 12-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 PA257_2609 cf06d11da3ae8f7a50cc74a07fee35c6 691 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 2 615 2.3E-252 T 12-10-2018 IPR022458 Conjugative coupling factor TraG/TraD PA257_2609 cf06d11da3ae8f7a50cc74a07fee35c6 691 Gene3D G3DSA:3.40.50.300 120 290 4.6E-8 T 12-10-2018 PA257_2609 cf06d11da3ae8f7a50cc74a07fee35c6 691 Gene3D G3DSA:3.40.50.300 378 618 8.5E-27 T 12-10-2018 PA257_1463 e930c2018e982e423413482d9f607846 184 Gene3D G3DSA:2.20.70.10 1 35 3.5E-18 T 12-10-2018 PA257_1463 e930c2018e982e423413482d9f607846 184 SUPERFAMILY SSF55811 2 165 1.14E-41 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_1463 e930c2018e982e423413482d9f607846 184 Gene3D G3DSA:3.90.79.10 36 180 1.7E-37 T 12-10-2018 PA257_1463 e930c2018e982e423413482d9f607846 184 Pfam PF00293 NUDIX domain 44 141 7.7E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_1463 e930c2018e982e423413482d9f607846 184 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PA257_1463 e930c2018e982e423413482d9f607846 184 Pfam PF14803 Nudix N-terminal 2 35 3.1E-17 T 12-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 PA257_6420 a0f69cc2d3991106ea2245f52b7db5d4 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.368 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 PA257_6420 a0f69cc2d3991106ea2245f52b7db5d4 153 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 150 1.6E-58 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 PA257_6420 a0f69cc2d3991106ea2245f52b7db5d4 153 Gene3D G3DSA:3.40.1280.10 1 153 2.6E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PA257_6420 a0f69cc2d3991106ea2245f52b7db5d4 153 Pfam PF00588 SpoU rRNA Methylase family 2 142 2.8E-32 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PA257_6420 a0f69cc2d3991106ea2245f52b7db5d4 153 SUPERFAMILY SSF75217 1 150 5.23E-47 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases PA257_6420 a0f69cc2d3991106ea2245f52b7db5d4 153 PIRSF PIRSF029256 1 153 3.7E-68 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 PA257_1944 13a30251f42851b2048a555a0b901fc9 141 Gene3D G3DSA:3.10.450.50 1 132 1.3E-41 T 12-10-2018 PA257_1944 13a30251f42851b2048a555a0b901fc9 141 Pfam PF12680 SnoaL-like domain 11 112 6.0E-12 T 12-10-2018 IPR037401 SnoaL-like domain PA257_1944 13a30251f42851b2048a555a0b901fc9 141 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 25 129 2.0E-4 T 12-10-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PA257_1944 13a30251f42851b2048a555a0b901fc9 141 SUPERFAMILY SSF54427 1 129 1.62E-38 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_6129 a876ee80015466055e3713074d021988 92 PIRSF PIRSF002097 1 92 2.7E-41 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PA257_6129 a876ee80015466055e3713074d021988 92 Gene3D G3DSA:1.10.10.60 2 91 2.4E-26 T 12-10-2018 PA257_6129 a876ee80015466055e3713074d021988 92 SUPERFAMILY SSF46689 10 91 7.17E-23 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6129 a876ee80015466055e3713074d021988 92 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 72 92 1.8E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_6129 a876ee80015466055e3713074d021988 92 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 55 72 1.8E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_6129 a876ee80015466055e3713074d021988 92 PRINTS PR01591 DNA-binding protein FIS signature 51 63 5.9E-12 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PA257_6129 a876ee80015466055e3713074d021988 92 PRINTS PR01591 DNA-binding protein FIS signature 36 51 5.9E-12 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PA257_6129 a876ee80015466055e3713074d021988 92 PRINTS PR01591 DNA-binding protein FIS signature 20 36 5.9E-12 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PA257_6129 a876ee80015466055e3713074d021988 92 Pfam PF02954 Bacterial regulatory protein, Fis family 51 89 6.0E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PA257_6239 01ccd85cd7cf4f3a810ea4b5d827d923 271 ProSitePatterns PS00380 Rhodanese signature 1. 36 47 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 PA257_6239 01ccd85cd7cf4f3a810ea4b5d827d923 271 SMART SM00450 149 267 6.1E-22 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_6239 01ccd85cd7cf4f3a810ea4b5d827d923 271 SMART SM00450 11 126 4.9E-17 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_6239 01ccd85cd7cf4f3a810ea4b5d827d923 271 Pfam PF00581 Rhodanese-like domain 151 263 1.9E-16 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_6239 01ccd85cd7cf4f3a810ea4b5d827d923 271 Pfam PF00581 Rhodanese-like domain 13 122 1.1E-13 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_6239 01ccd85cd7cf4f3a810ea4b5d827d923 271 ProSitePatterns PS00683 Rhodanese C-terminal signature. 251 261 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 PA257_6239 01ccd85cd7cf4f3a810ea4b5d827d923 271 Gene3D G3DSA:3.40.250.10 146 271 1.5E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_6239 01ccd85cd7cf4f3a810ea4b5d827d923 271 Gene3D G3DSA:3.40.250.10 2 144 1.8E-36 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_6239 01ccd85cd7cf4f3a810ea4b5d827d923 271 SUPERFAMILY SSF52821 3 132 2.1E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_6239 01ccd85cd7cf4f3a810ea4b5d827d923 271 SUPERFAMILY SSF52821 145 270 2.23E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 Gene3D G3DSA:3.40.220.10 1 160 2.8E-57 T 12-10-2018 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 346 353 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 495 41.256 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 SUPERFAMILY SSF52949 1 182 3.12E-44 T 12-10-2018 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 SUPERFAMILY SSF53187 177 493 4.08E-126 T 12-10-2018 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 486 5.7E-127 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 Gene3D G3DSA:3.40.630.10 177 495 1.6E-142 T 12-10-2018 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 PRINTS PR00481 Cytosol aminopeptidase signature 320 341 1.1E-53 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 PRINTS PR00481 Cytosol aminopeptidase signature 342 362 1.1E-53 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 PRINTS PR00481 Cytosol aminopeptidase signature 261 278 1.1E-53 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 PRINTS PR00481 Cytosol aminopeptidase signature 370 385 1.1E-53 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 PRINTS PR00481 Cytosol aminopeptidase signature 283 304 1.1E-53 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PA257_1335 8e83f8790ae800f797d5fd7e82c71839 495 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.2E-31 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PA257_1622 cc8b401d92b26f676225a68c99bdd023 174 SUPERFAMILY SSF46955 5 55 4.58E-7 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_1622 cc8b401d92b26f676225a68c99bdd023 174 Gene3D G3DSA:1.10.10.10 3 71 4.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1622 cc8b401d92b26f676225a68c99bdd023 174 Pfam PF07471 Phage DNA packaging protein Nu1 4 78 2.5E-15 T 12-10-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit PA257_0116 2ae6417fec8fb0f69d35c6238c5afc99 144 Pfam PF08786 DcrB 8 136 1.6E-34 T 12-10-2018 IPR014894 Protein DcrB PA257_0116 2ae6417fec8fb0f69d35c6238c5afc99 144 Gene3D G3DSA:3.40.1000.10 1 144 2.8E-46 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich PA257_0116 2ae6417fec8fb0f69d35c6238c5afc99 144 SUPERFAMILY SSF55724 2 141 2.14E-47 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich PA257_6629 e17b249327d3b6e53a338b0b8c34daf5 134 SUPERFAMILY SSF54534 48 125 3.66E-16 T 12-10-2018 PA257_6629 e17b249327d3b6e53a338b0b8c34daf5 134 Gene3D G3DSA:3.10.50.30 45 134 6.9E-30 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 PA257_6629 e17b249327d3b6e53a338b0b8c34daf5 134 Gene3D G3DSA:1.10.286.20 1 43 1.5E-8 T 12-10-2018 PA257_6629 e17b249327d3b6e53a338b0b8c34daf5 134 Pfam PF14760 Rnk N-terminus 4 43 4.7E-15 T 12-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain PA257_6629 e17b249327d3b6e53a338b0b8c34daf5 134 PIRSF PIRSF006092 27 126 7.4E-24 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PA257_6629 e17b249327d3b6e53a338b0b8c34daf5 134 PIRSF PIRSF006092 1 30 74.0 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PA257_6629 e17b249327d3b6e53a338b0b8c34daf5 134 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 6.9E-20 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PA257_2275 da2651adf279c035ed25f9a356b9cf0e 343 Pfam PF12833 Helix-turn-helix domain 258 336 1.4E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2275 da2651adf279c035ed25f9a356b9cf0e 343 Gene3D G3DSA:1.10.10.60 236 342 3.6E-23 T 12-10-2018 PA257_2275 da2651adf279c035ed25f9a356b9cf0e 343 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 208 3.7E-52 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_2275 da2651adf279c035ed25f9a356b9cf0e 343 SMART SM00342 252 334 2.0E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2275 da2651adf279c035ed25f9a356b9cf0e 343 SUPERFAMILY SSF46689 287 337 1.43E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2275 da2651adf279c035ed25f9a356b9cf0e 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 334 5.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_2275 da2651adf279c035ed25f9a356b9cf0e 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 318 5.7E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_0278 42659172796250759bf1eb352d931854 144 SMART SM00116 80 127 2.2E-7 T 12-10-2018 IPR000644 CBS domain PA257_0278 42659172796250759bf1eb352d931854 144 SMART SM00116 15 62 4.5E-7 T 12-10-2018 IPR000644 CBS domain PA257_0278 42659172796250759bf1eb352d931854 144 SUPERFAMILY SSF54631 10 142 5.56E-33 T 12-10-2018 PA257_0278 42659172796250759bf1eb352d931854 144 Pfam PF00571 CBS domain 74 125 1.3E-11 T 12-10-2018 IPR000644 CBS domain PA257_0278 42659172796250759bf1eb352d931854 144 Pfam PF00571 CBS domain 14 61 1.0E-10 T 12-10-2018 IPR000644 CBS domain PA257_0278 42659172796250759bf1eb352d931854 144 Gene3D G3DSA:3.10.580.10 1 143 4.7E-46 T 12-10-2018 PA257_0054 f485fcef3b1753db022a0a26f89f4ba4 1112 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 171 202 0.16 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0054 f485fcef3b1753db022a0a26f89f4ba4 1112 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 83 122 1.8E-4 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0054 f485fcef3b1753db022a0a26f89f4ba4 1112 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 102 138 0.015 T 12-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PA257_0054 f485fcef3b1753db022a0a26f89f4ba4 1112 Pfam PF04830 Possible hemagglutinin (DUF637) 544 705 1.2E-35 T 12-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative PA257_0054 f485fcef3b1753db022a0a26f89f4ba4 1112 Pfam PF13332 Haemagluttinin repeat 167 217 0.0065 T 12-10-2018 IPR025157 Hemagglutinin repeat PA257_0054 f485fcef3b1753db022a0a26f89f4ba4 1112 Pfam PF13332 Haemagluttinin repeat 365 428 1.2E-6 T 12-10-2018 IPR025157 Hemagglutinin repeat PA257_0054 f485fcef3b1753db022a0a26f89f4ba4 1112 Pfam PF13332 Haemagluttinin repeat 287 345 7.3E-6 T 12-10-2018 IPR025157 Hemagglutinin repeat PA257_0054 f485fcef3b1753db022a0a26f89f4ba4 1112 Pfam PF13332 Haemagluttinin repeat 218 284 4.4E-6 T 12-10-2018 IPR025157 Hemagglutinin repeat PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 Gene3D G3DSA:3.80.30.20 137 379 1.2E-70 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 Pfam PF04055 Radical SAM superfamily 145 322 7.6E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 SMART SM00729 139 365 2.6E-51 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 437 6.7E-104 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 SUPERFAMILY SSF102114 109 370 3.53E-53 T 12-10-2018 PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 7 436 2.0E-178 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 Gene3D G3DSA:2.40.50.140 380 440 2.9E-23 T 12-10-2018 PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 Pfam PF01938 TRAM domain 377 440 1.5E-5 T 12-10-2018 IPR002792 TRAM domain PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 439 61.878 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 Gene3D G3DSA:3.40.50.12160 7 127 7.1E-29 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 143 163 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 PA257_4926 95434972f74fc1c699aff7f0a4c35f89 440 Pfam PF00919 Uncharacterized protein family UPF0004 7 98 9.4E-21 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 PA257_6883 dc345c349d02eaa2f601eac17913cd50 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 9.0E-17 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 PA257_6883 dc345c349d02eaa2f601eac17913cd50 53 PIRSF PIRSF036466 1 53 6.5E-24 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 PA257_6883 dc345c349d02eaa2f601eac17913cd50 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 21.504 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 PA257_6637 b9cd7f95645a18cff7501f91ba5fbf18 232 SUPERFAMILY SSF56784 5 229 7.37E-47 T 12-10-2018 IPR036412 HAD-like superfamily PA257_6637 b9cd7f95645a18cff7501f91ba5fbf18 232 Gene3D G3DSA:1.20.120.1600 18 104 7.9E-85 T 12-10-2018 PA257_6637 b9cd7f95645a18cff7501f91ba5fbf18 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 200 3.6E-20 T 12-10-2018 PA257_6637 b9cd7f95645a18cff7501f91ba5fbf18 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 190 203 3.2E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_6637 b9cd7f95645a18cff7501f91ba5fbf18 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.2E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_6637 b9cd7f95645a18cff7501f91ba5fbf18 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 3.2E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_6637 b9cd7f95645a18cff7501f91ba5fbf18 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 94 195 7.9E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_6637 b9cd7f95645a18cff7501f91ba5fbf18 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 200 8.5E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_6637 b9cd7f95645a18cff7501f91ba5fbf18 232 Gene3D G3DSA:3.40.50.1000 6 221 7.9E-85 T 12-10-2018 IPR023214 HAD superfamily PA257_3251 a52870b0b55ce24dc94eb9dd09c9f41a 391 Gene3D G3DSA:1.10.287.470 94 185 1.4E-89 T 12-10-2018 PA257_3251 a52870b0b55ce24dc94eb9dd09c9f41a 391 Gene3D G3DSA:2.40.30.170 49 322 1.4E-89 T 12-10-2018 PA257_3251 a52870b0b55ce24dc94eb9dd09c9f41a 391 Gene3D G3DSA:2.40.420.20 44 381 1.4E-89 T 12-10-2018 PA257_3251 a52870b0b55ce24dc94eb9dd09c9f41a 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 264 4.3E-39 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_3251 a52870b0b55ce24dc94eb9dd09c9f41a 391 SUPERFAMILY SSF111369 51 252 1.44E-24 T 12-10-2018 PA257_3251 a52870b0b55ce24dc94eb9dd09c9f41a 391 Gene3D G3DSA:2.40.50.100 60 222 1.4E-89 T 12-10-2018 PA257_3251 a52870b0b55ce24dc94eb9dd09c9f41a 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 265 6.4E-20 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 Pfam PF00067 Cytochrome P450 307 406 3.0E-14 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 SUPERFAMILY SSF48264 32 434 1.44E-73 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 PRINTS PR00359 B-class P450 signature 182 197 6.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 PRINTS PR00359 B-class P450 signature 310 321 6.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 PRINTS PR00359 B-class P450 signature 377 386 6.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 PRINTS PR00359 B-class P450 signature 327 354 6.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 PRINTS PR00359 B-class P450 signature 119 130 6.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 PRINTS PR00359 B-class P450 signature 165 181 6.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 PRINTS PR00359 B-class P450 signature 386 397 6.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 PRINTS PR00359 B-class P450 signature 355 370 6.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PA257_3099 e3ea8b40aa91d98b41c8dca5a276bdfe 444 Gene3D G3DSA:1.10.630.10 26 442 3.2E-106 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_3187 eb724848f81b0e13511a0c7df494f605 373 Gene3D G3DSA:4.10.1250.10 235 283 1.5E-20 T 12-10-2018 PA257_3187 eb724848f81b0e13511a0c7df494f605 373 Gene3D G3DSA:3.30.70.1400 57 142 5.6E-85 T 12-10-2018 PA257_3187 eb724848f81b0e13511a0c7df494f605 373 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 257 9.1E-91 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PA257_3187 eb724848f81b0e13511a0c7df494f605 373 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 270 363 5.8E-22 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PA257_3187 eb724848f81b0e13511a0c7df494f605 373 Gene3D G3DSA:3.30.1360.120 8 234 5.6E-85 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PA257_3187 eb724848f81b0e13511a0c7df494f605 373 SUPERFAMILY SSF103025 6 286 1.11E-91 T 12-10-2018 PA257_3187 eb724848f81b0e13511a0c7df494f605 373 Gene3D G3DSA:2.40.30.110 285 361 4.9E-26 T 12-10-2018 PA257_3187 eb724848f81b0e13511a0c7df494f605 373 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 7 367 2.9E-107 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PA257_3187 eb724848f81b0e13511a0c7df494f605 373 SUPERFAMILY SSF101790 278 372 6.7E-25 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PA257_3187 eb724848f81b0e13511a0c7df494f605 373 PIRSF PIRSF006487 1 373 1.5E-82 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PA257_1829 cfed96173f0a3c07781272bfe57947fc 274 Gene3D G3DSA:3.40.50.300 21 248 8.7E-62 T 12-10-2018 PA257_1829 cfed96173f0a3c07781272bfe57947fc 274 SMART SM00382 45 219 6.2E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1829 cfed96173f0a3c07781272bfe57947fc 274 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1829 cfed96173f0a3c07781272bfe57947fc 274 SUPERFAMILY SSF52540 21 222 2.27E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1829 cfed96173f0a3c07781272bfe57947fc 274 Pfam PF00005 ABC transporter 36 169 4.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 SUPERFAMILY SSF55785 30 132 8.54E-24 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 260 1.7E-15 T 12-10-2018 IPR000014 PAS domain PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 134 6.4E-16 T 12-10-2018 IPR000014 PAS domain PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 SUPERFAMILY SSF55785 152 252 3.84E-21 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 Gene3D G3DSA:3.30.450.20 142 254 2.8E-19 T 12-10-2018 PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 SUPERFAMILY SSF58104 250 428 1.96E-49 T 12-10-2018 PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 9.7E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 352 381 9.7E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 350 9.7E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 Gene3D G3DSA:1.10.287.950 255 431 1.4E-40 T 12-10-2018 PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 298 427 5.3E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 SMART SM00086 92 134 1.6E-4 T 12-10-2018 IPR001610 PAC motif PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 SMART SM00086 212 254 0.029 T 12-10-2018 IPR001610 PAC motif PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 SMART SM00283 226 431 3.2E-16 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 SMART SM00091 17 87 8.9 T 12-10-2018 IPR000014 PAS domain PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 SMART SM00091 139 207 0.0036 T 12-10-2018 IPR000014 PAS domain PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 Gene3D G3DSA:3.30.450.20 22 141 4.9E-24 T 12-10-2018 PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 Pfam PF13426 PAS domain 36 132 1.7E-12 T 12-10-2018 IPR000014 PAS domain PA257_3811 2a1ad2cd3ed1eebba1840f9b18aeeff5 431 Pfam PF13426 PAS domain 154 253 4.0E-14 T 12-10-2018 IPR000014 PAS domain PA257_5855 cb741965c4ee38e8467187dc0d1c149a 282 Gene3D G3DSA:3.30.70.890 161 279 7.3E-28 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PA257_5855 cb741965c4ee38e8467187dc0d1c149a 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 278 3.9E-84 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PA257_5855 cb741965c4ee38e8467187dc0d1c149a 282 PIRSF PIRSF010376 3 279 1.5E-86 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PA257_5855 cb741965c4ee38e8467187dc0d1c149a 282 SUPERFAMILY SSF54211 7 158 4.93E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_5855 cb741965c4ee38e8467187dc0d1c149a 282 Gene3D G3DSA:3.30.230.10 1 160 2.2E-56 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_5855 cb741965c4ee38e8467187dc0d1c149a 282 Pfam PF00288 GHMP kinases N terminal domain 87 144 1.3E-10 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 PA257_5855 cb741965c4ee38e8467187dc0d1c149a 282 SUPERFAMILY SSF55060 160 277 3.36E-33 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PA257_5855 cb741965c4ee38e8467187dc0d1c149a 282 Pfam PF08544 GHMP kinases C terminal 203 254 5.4E-5 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain PA257_5855 cb741965c4ee38e8467187dc0d1c149a 282 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 271 33.125 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PA257_5261 c008ccce1bd6e8a32d23880da312bfd7 144 Pfam PF09278 MerR, DNA binding 51 113 2.1E-18 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding PA257_5261 c008ccce1bd6e8a32d23880da312bfd7 144 SMART SM00422 8 77 1.6E-28 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5261 c008ccce1bd6e8a32d23880da312bfd7 144 Gene3D G3DSA:1.10.1660.10 1 130 3.6E-32 T 12-10-2018 PA257_5261 c008ccce1bd6e8a32d23880da312bfd7 144 SUPERFAMILY SSF46955 8 130 3.11E-29 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_5261 c008ccce1bd6e8a32d23880da312bfd7 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 3.6E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5261 c008ccce1bd6e8a32d23880da312bfd7 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 3.6E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5261 c008ccce1bd6e8a32d23880da312bfd7 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 3.6E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5261 c008ccce1bd6e8a32d23880da312bfd7 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5261 c008ccce1bd6e8a32d23880da312bfd7 144 Pfam PF00376 MerR family regulatory protein 9 46 5.1E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5261 c008ccce1bd6e8a32d23880da312bfd7 144 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 8.3E-55 T 12-10-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 PA257_3336 ea7d123872f38c0ee8a4da99beb2d866 282 Pfam PF00005 ABC transporter 37 178 1.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3336 ea7d123872f38c0ee8a4da99beb2d866 282 Gene3D G3DSA:3.40.50.300 14 253 1.3E-63 T 12-10-2018 PA257_3336 ea7d123872f38c0ee8a4da99beb2d866 282 SUPERFAMILY SSF52540 17 230 4.9E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3336 ea7d123872f38c0ee8a4da99beb2d866 282 SMART SM00382 45 226 5.0E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3336 ea7d123872f38c0ee8a4da99beb2d866 282 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_5901 e1fa1b96cabd7d49242d3c037ee6d3ad 202 Pfam PF01794 Ferric reductase like transmembrane component 43 154 1.3E-16 T 12-10-2018 IPR013130 Ferric reductase transmembrane component-like domain PA257_5901 e1fa1b96cabd7d49242d3c037ee6d3ad 202 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 1 195 20.052 T 12-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 PA257_2256 26e9713ec4adde923c798dd755da30f3 443 SUPERFAMILY SSF109604 21 434 2.93E-64 T 12-10-2018 PA257_2256 26e9713ec4adde923c798dd755da30f3 443 Hamap MF_01213 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 440 52.737 T 12-10-2018 IPR023024 dNTP triphosphohydrolase, type 3 GO:0016793 PA257_2256 26e9713ec4adde923c798dd755da30f3 443 SMART SM00471 57 255 7.6E-10 T 12-10-2018 IPR003607 HD/PDEase domain PA257_2256 26e9713ec4adde923c798dd755da30f3 443 Gene3D G3DSA:1.10.3550.10 112 429 1.6E-163 T 12-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal PA257_2256 26e9713ec4adde923c798dd755da30f3 443 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 4.7E-98 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 PA257_2256 26e9713ec4adde923c798dd755da30f3 443 Gene3D G3DSA:1.10.3210.10 26 238 1.6E-163 T 12-10-2018 PA257_2256 26e9713ec4adde923c798dd755da30f3 443 Pfam PF01966 HD domain 61 125 9.2E-9 T 12-10-2018 IPR006674 HD domain PA257_2256 26e9713ec4adde923c798dd755da30f3 443 Gene3D G3DSA:1.10.3410.10 239 351 1.6E-163 T 12-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 PA257_0551 a14dad603266809511c8e891166f48f0 264 Gene3D G3DSA:1.10.10.60 214 263 3.3E-10 T 12-10-2018 PA257_0551 a14dad603266809511c8e891166f48f0 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 167 206 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_0551 a14dad603266809511c8e891166f48f0 264 Pfam PF02311 AraC-like ligand binding domain 12 141 1.8E-21 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_0551 a14dad603266809511c8e891166f48f0 264 Pfam PF12833 Helix-turn-helix domain 183 260 9.6E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0551 a14dad603266809511c8e891166f48f0 264 SMART SM00342 177 259 7.2E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0551 a14dad603266809511c8e891166f48f0 264 SUPERFAMILY SSF46689 213 261 4.48E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0551 a14dad603266809511c8e891166f48f0 264 Gene3D G3DSA:1.10.10.60 160 213 7.4E-16 T 12-10-2018 PA257_0551 a14dad603266809511c8e891166f48f0 264 SUPERFAMILY SSF51215 21 144 2.48E-15 T 12-10-2018 IPR037923 Transcription regulator HTH-like PA257_0551 a14dad603266809511c8e891166f48f0 264 SUPERFAMILY SSF46689 161 211 8.51E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5632 df6467b013721f913a77ebde35351d16 82 Gene3D G3DSA:1.10.1220.10 1 55 5.2E-20 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PA257_5632 df6467b013721f913a77ebde35351d16 82 Pfam PF03869 Arc-like DNA binding domain 5 43 5.8E-15 T 12-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 PA257_5632 df6467b013721f913a77ebde35351d16 82 SUPERFAMILY SSF47598 5 48 2.0E-11 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 Gene3D G3DSA:3.40.190.10 130 357 5.0E-129 T 12-10-2018 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PIRSF PIRSF019574 1 363 2.9E-131 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 Gene3D G3DSA:3.40.190.10 26 331 5.0E-129 T 12-10-2018 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 SUPERFAMILY SSF53850 26 362 5.69E-97 T 12-10-2018 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 Pfam PF13416 Bacterial extracellular solute-binding protein 39 328 8.9E-33 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 6.1E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 307 333 6.1E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 175 194 6.1E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 6.1E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 262 281 6.1E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 152 166 6.1E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 212 231 6.1E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 6.1E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 6.1E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2837 03666885472c4ecfcb5e1adad41a98ce 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 121 137 6.1E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_6094 5c8de3ed310dea6365a5434e01d40755 453 Pfam PF01554 MatE 248 406 6.1E-14 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PA257_6094 5c8de3ed310dea6365a5434e01d40755 453 Pfam PF01554 MatE 23 181 3.8E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PA257_6094 5c8de3ed310dea6365a5434e01d40755 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 2.4E-71 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 Gene3D G3DSA:2.40.30.10 239 328 1.1E-28 T 12-10-2018 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 SUPERFAMILY SSF50447 243 328 3.98E-25 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 211 2.4E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 Gene3D G3DSA:3.40.50.300 1 238 3.2E-77 T 12-10-2018 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 432 1.5E-205 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 Gene3D G3DSA:3.40.50.300 445 633 3.6E-51 T 12-10-2018 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 Gene3D G3DSA:2.40.30.10 329 434 1.2E-35 T 12-10-2018 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 463 631 32.412 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 SUPERFAMILY SSF52540 17 234 1.23E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 SUPERFAMILY SSF50465 331 433 2.21E-33 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 Pfam PF01583 Adenylylsulphate kinase 464 614 1.9E-52 T 12-10-2018 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 451 627 2.4E-41 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 Pfam PF00009 Elongation factor Tu GTP binding domain 23 225 2.5E-44 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 460 55.186 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 PRINTS PR00315 GTP-binding elongation factor signature 107 117 3.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 PRINTS PR00315 GTP-binding elongation factor signature 26 39 3.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 PRINTS PR00315 GTP-binding elongation factor signature 160 169 3.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 PRINTS PR00315 GTP-binding elongation factor signature 87 95 3.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 PRINTS PR00315 GTP-binding elongation factor signature 123 134 3.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_5509 7badec72a6e63768a19bbf88e9729e38 633 SUPERFAMILY SSF52540 463 629 1.74E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6584 578d9569aa1fb8525920631486627b62 916 SUPERFAMILY SSF52540 266 498 2.44E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6584 578d9569aa1fb8525920631486627b62 916 Pfam PF12698 ABC-2 family transporter protein 570 908 1.0E-42 T 12-10-2018 PA257_6584 578d9569aa1fb8525920631486627b62 916 Pfam PF00005 ABC transporter 291 434 9.2E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6584 578d9569aa1fb8525920631486627b62 916 Gene3D G3DSA:3.40.50.300 5 252 3.2E-62 T 12-10-2018 PA257_6584 578d9569aa1fb8525920631486627b62 916 Gene3D G3DSA:3.40.50.300 267 511 1.1E-62 T 12-10-2018 PA257_6584 578d9569aa1fb8525920631486627b62 916 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6584 578d9569aa1fb8525920631486627b62 916 Pfam PF00005 ABC transporter 25 171 9.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6584 578d9569aa1fb8525920631486627b62 916 SMART SM00382 299 490 8.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6584 578d9569aa1fb8525920631486627b62 916 SMART SM00382 33 264 2.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6584 578d9569aa1fb8525920631486627b62 916 SUPERFAMILY SSF52540 11 235 1.25E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4122 2c3d3d52483c4155997b869aeb37d784 224 Pfam PF13503 Domain of unknown function (DUF4123) 1 117 3.5E-23 T 12-10-2018 IPR025391 Domain of unknown function DUF4123 PA257_6098 6ead7fd87d796c82f4ab9695deb2e09d 258 PIRSF PIRSF029691 1 258 7.5E-116 T 12-10-2018 IPR016934 Uncharacterised conserved protein UCP029691 PA257_6195 8022d1c5d9b3074d01a563edd091a5a4 231 SUPERFAMILY SSF46785 151 217 9.68E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6195 8022d1c5d9b3074d01a563edd091a5a4 231 Gene3D G3DSA:3.90.79.10 2 139 6.3E-26 T 12-10-2018 PA257_6195 8022d1c5d9b3074d01a563edd091a5a4 231 SUPERFAMILY SSF55811 9 144 1.05E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_6195 8022d1c5d9b3074d01a563edd091a5a4 231 Gene3D G3DSA:1.10.10.10 148 229 1.1E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 3.9E-41 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 SUPERFAMILY SSF56645 5 247 1.83E-86 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 Gene3D G3DSA:1.10.540.10 2 125 6.0E-48 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 6.4E-28 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 PIRSF PIRSF016578 13 387 2.8E-14 T 12-10-2018 PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 SUPERFAMILY SSF47203 233 385 6.28E-46 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 Gene3D G3DSA:2.40.110.10 126 238 2.0E-44 T 12-10-2018 PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 123 1.9E-37 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 Gene3D G3DSA:1.20.140.10 239 383 1.1E-46 T 12-10-2018 PA257_3723 5289417b8bcae21b76034cdd7c52778b 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_4988 09a356a1c764c91504dd22fc57134f85 818 SUPERFAMILY SSF55785 232 361 3.32E-18 T 12-10-2018 IPR035965 PAS domain superfamily PA257_4988 09a356a1c764c91504dd22fc57134f85 818 SUPERFAMILY SSF141868 553 796 4.84E-73 T 12-10-2018 IPR035919 EAL domain superfamily PA257_4988 09a356a1c764c91504dd22fc57134f85 818 SMART SM00052 547 797 2.6E-69 T 12-10-2018 IPR001633 EAL domain PA257_4988 09a356a1c764c91504dd22fc57134f85 818 SUPERFAMILY SSF55073 379 537 2.35E-49 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_4988 09a356a1c764c91504dd22fc57134f85 818 SMART SM00267 363 535 2.5E-64 T 12-10-2018 IPR000160 GGDEF domain PA257_4988 09a356a1c764c91504dd22fc57134f85 818 Gene3D G3DSA:3.30.450.20 234 361 1.2E-20 T 12-10-2018 PA257_4988 09a356a1c764c91504dd22fc57134f85 818 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 534 4.9E-44 T 12-10-2018 IPR000160 GGDEF domain PA257_4988 09a356a1c764c91504dd22fc57134f85 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 251 369 1.1E-14 T 12-10-2018 IPR000014 PAS domain PA257_4988 09a356a1c764c91504dd22fc57134f85 818 SMART SM00091 245 311 3.4E-7 T 12-10-2018 IPR000014 PAS domain PA257_4988 09a356a1c764c91504dd22fc57134f85 818 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 531 2.2E-45 T 12-10-2018 IPR000160 GGDEF domain PA257_4988 09a356a1c764c91504dd22fc57134f85 818 Gene3D G3DSA:3.30.70.270 368 536 1.9E-57 T 12-10-2018 PA257_4988 09a356a1c764c91504dd22fc57134f85 818 Pfam PF00563 EAL domain 553 792 5.2E-63 T 12-10-2018 IPR001633 EAL domain PA257_4988 09a356a1c764c91504dd22fc57134f85 818 Gene3D G3DSA:3.20.20.450 537 798 2.9E-83 T 12-10-2018 IPR035919 EAL domain superfamily PA257_4988 09a356a1c764c91504dd22fc57134f85 818 Pfam PF00989 PAS fold 251 360 7.2E-12 T 12-10-2018 IPR013767 PAS fold GO:0006355 PA257_4117 95589ea6cd5599abf5c55e4c0655afec 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 65 489 1.8E-182 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PA257_4117 95589ea6cd5599abf5c55e4c0655afec 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 17 489 5.3E-217 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PA257_0661 6cd70c5ed376a551b3443eb30c54645a 260 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 174 256 2.6E-30 T 12-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal PA257_0661 6cd70c5ed376a551b3443eb30c54645a 260 Pfam PF07728 AAA domain (dynein-related subfamily) 27 161 1.7E-31 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PA257_0661 6cd70c5ed376a551b3443eb30c54645a 260 Gene3D G3DSA:3.40.50.300 11 179 6.7E-31 T 12-10-2018 PA257_0661 6cd70c5ed376a551b3443eb30c54645a 260 SUPERFAMILY SSF52540 14 232 1.45E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1251 d805815129e35234c749ffede7e53016 296 Pfam PF01136 Peptidase family U32 83 264 1.3E-11 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PA257_1897 18a671b19160b5a51ad5fa35305b0907 271 SMART SM00382 44 242 2.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1897 18a671b19160b5a51ad5fa35305b0907 271 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_1897 18a671b19160b5a51ad5fa35305b0907 271 Pfam PF00005 ABC transporter 36 192 2.5E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1897 18a671b19160b5a51ad5fa35305b0907 271 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 18 269 2.2E-117 T 12-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK PA257_1897 18a671b19160b5a51ad5fa35305b0907 271 PIRSF PIRSF037116 7 271 3.1E-144 T 12-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK PA257_1897 18a671b19160b5a51ad5fa35305b0907 271 SUPERFAMILY SSF52540 16 267 7.23E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1897 18a671b19160b5a51ad5fa35305b0907 271 Gene3D G3DSA:3.40.50.300 18 271 3.3E-67 T 12-10-2018 PA257_2062 e41367e78ff8b1824c3bc3c5685d958c 610 SUPERFAMILY SSF90123 31 343 2.88E-48 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_2062 e41367e78ff8b1824c3bc3c5685d958c 610 Gene3D G3DSA:1.20.1560.10 8 344 4.2E-25 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PA257_2062 e41367e78ff8b1824c3bc3c5685d958c 610 Pfam PF00005 ABC transporter 379 532 2.0E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_2062 e41367e78ff8b1824c3bc3c5685d958c 610 Pfam PF00664 ABC transporter transmembrane region 42 301 1.2E-14 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PA257_2062 e41367e78ff8b1824c3bc3c5685d958c 610 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_2062 e41367e78ff8b1824c3bc3c5685d958c 610 SMART SM00382 387 578 1.1E-22 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_2062 e41367e78ff8b1824c3bc3c5685d958c 610 SUPERFAMILY SSF52540 351 602 2.66E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2062 e41367e78ff8b1824c3bc3c5685d958c 610 Gene3D G3DSA:3.40.50.300 352 605 6.0E-90 T 12-10-2018 PA257_4324 bcdd04d6978e403ebfea0da8ca0d2cad 240 SUPERFAMILY SSF64438 26 224 1.52E-46 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic PA257_4324 bcdd04d6978e403ebfea0da8ca0d2cad 240 Gene3D G3DSA:3.60.140.10 4 239 1.2E-50 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily PA257_4324 bcdd04d6978e403ebfea0da8ca0d2cad 240 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 17 226 5.8E-45 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase PA257_2881 a8275d505902651d8fbb42fb1d01f77e 337 Pfam PF03934 Type II secretion system (T2SS), protein K 116 253 9.2E-7 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PA257_5494 782f88f8389411e71ec36512086af93c 135 Pfam PF04386 Stringent starvation protein B 4 135 4.1E-35 T 12-10-2018 IPR007481 Stringent starvation protein B PA257_5494 782f88f8389411e71ec36512086af93c 135 Gene3D G3DSA:2.30.30.220 1 120 1.7E-48 T 12-10-2018 IPR036760 SspB-like superfamily PA257_5494 782f88f8389411e71ec36512086af93c 135 PIRSF PIRSF005276 1 135 2.8E-55 T 12-10-2018 IPR007481 Stringent starvation protein B PA257_5494 782f88f8389411e71ec36512086af93c 135 SUPERFAMILY SSF101738 1 114 1.31E-47 T 12-10-2018 IPR036760 SspB-like superfamily PA257_4960 bc93af6c6f02bb9d195d922d5d7c379e 208 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 61 180 3.7E-20 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PA257_4889 b4f9772a60e7b5e27753ef3f14aa4e11 117 Gene3D G3DSA:3.40.30.10 1 117 3.2E-48 T 12-10-2018 PA257_4889 b4f9772a60e7b5e27753ef3f14aa4e11 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 6 116 4.7E-45 T 12-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 PA257_4889 b4f9772a60e7b5e27753ef3f14aa4e11 117 Pfam PF03960 ArsC family 9 115 2.3E-19 T 12-10-2018 IPR006660 Arsenate reductase-like PA257_4889 b4f9772a60e7b5e27753ef3f14aa4e11 117 SUPERFAMILY SSF52833 5 116 1.6E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_6001 cba87434da6123595070dedad808c1b1 393 SMART SM00471 173 324 8.6E-7 T 12-10-2018 IPR003607 HD/PDEase domain PA257_6001 cba87434da6123595070dedad808c1b1 393 SMART SM00448 11 124 3.2E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6001 cba87434da6123595070dedad808c1b1 393 Pfam PF00072 Response regulator receiver domain 13 124 7.5E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6001 cba87434da6123595070dedad808c1b1 393 Gene3D G3DSA:3.40.50.2300 4 142 1.1E-37 T 12-10-2018 PA257_6001 cba87434da6123595070dedad808c1b1 393 Gene3D G3DSA:1.10.3210.10 151 368 5.2E-70 T 12-10-2018 PA257_6001 cba87434da6123595070dedad808c1b1 393 SUPERFAMILY SSF109604 153 353 4.4E-26 T 12-10-2018 PA257_6001 cba87434da6123595070dedad808c1b1 393 SUPERFAMILY SSF52172 13 160 1.2E-38 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6001 cba87434da6123595070dedad808c1b1 393 Pfam PF13487 HD domain 236 305 5.6E-17 T 12-10-2018 PA257_2494 79975dac7d9a552fe09dd2b5eef7d304 296 SUPERFAMILY SSF52540 54 189 7.64E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2494 79975dac7d9a552fe09dd2b5eef7d304 296 Gene3D G3DSA:3.40.50.300 57 193 6.2E-10 T 12-10-2018 PA257_2494 79975dac7d9a552fe09dd2b5eef7d304 296 Pfam PF05673 Protein of unknown function (DUF815) 34 289 3.0E-104 T 12-10-2018 IPR008533 Domain of unknown function DUF815 PA257_6394 14a059e611d9ba4ecbcca01fa55c9216 340 Gene3D G3DSA:3.40.190.10 33 328 8.7E-45 T 12-10-2018 PA257_6394 14a059e611d9ba4ecbcca01fa55c9216 340 SUPERFAMILY SSF53850 27 334 4.13E-77 T 12-10-2018 PA257_6394 14a059e611d9ba4ecbcca01fa55c9216 340 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 32 318 6.6E-61 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PA257_6394 14a059e611d9ba4ecbcca01fa55c9216 340 Gene3D G3DSA:3.40.190.100 114 261 8.7E-45 T 12-10-2018 PA257_5176 ace447010d82b85ca2be88bb9984c793 358 Pfam PF09925 Predicted membrane protein (DUF2157) 60 181 2.9E-15 T 12-10-2018 IPR018677 Domain of unknown function DUF2157 PA257_4083 aef5f6e03c45c82af20bbe81156a0de3 262 Pfam PF01311 Bacterial export proteins, family 1 11 243 4.4E-51 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PA257_4083 aef5f6e03c45c82af20bbe81156a0de3 262 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 4 254 3.7E-88 T 12-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 PA257_4083 aef5f6e03c45c82af20bbe81156a0de3 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.8E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PA257_4083 aef5f6e03c45c82af20bbe81156a0de3 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.8E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PA257_4083 aef5f6e03c45c82af20bbe81156a0de3 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 1.8E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PA257_4083 aef5f6e03c45c82af20bbe81156a0de3 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 1.8E-27 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PA257_5982 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 SUPERFAMILY SSF46785 6 131 4.89E-41 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5982 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 Pfam PF01475 Ferric uptake regulator family 9 129 1.4E-45 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PA257_5982 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 Gene3D G3DSA:1.10.10.10 1 83 6.9E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5982 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 Gene3D G3DSA:3.30.1490.190 85 134 2.4E-18 T 12-10-2018 PA257_2892 4c2b1dc8288d6e8d5b3b9b16dad463f3 297 SUPERFAMILY SSF53474 88 232 1.53E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6559 03d92a750235d84cddca63b900817e25 422 Pfam PF01384 Phosphate transporter family 26 409 4.5E-113 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 PA257_2058 32dffb4da0d75d643a4050db90ee070d 208 Pfam PF00929 Exonuclease 34 194 5.6E-19 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_2058 32dffb4da0d75d643a4050db90ee070d 208 SMART SM00479 31 204 7.9E-26 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_2058 32dffb4da0d75d643a4050db90ee070d 208 Gene3D G3DSA:3.30.420.10 22 202 4.3E-34 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_2058 32dffb4da0d75d643a4050db90ee070d 208 SUPERFAMILY SSF53098 22 201 2.81E-36 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_6322 7b45b09ea33b28562766a764fab49210 309 Gene3D G3DSA:3.40.50.720 1 307 4.5E-71 T 12-10-2018 PA257_6322 7b45b09ea33b28562766a764fab49210 309 Pfam PF00106 short chain dehydrogenase 16 216 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6322 7b45b09ea33b28562766a764fab49210 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 6.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6322 7b45b09ea33b28562766a764fab49210 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 6.9E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6322 7b45b09ea33b28562766a764fab49210 309 SUPERFAMILY SSF51735 7 274 1.14E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4480 295012c46804ff795b0190a1443bed2f 513 Pfam PF07690 Major Facilitator Superfamily 13 405 6.5E-52 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4480 295012c46804ff795b0190a1443bed2f 513 Gene3D G3DSA:1.20.1720.10 9 222 7.0E-49 T 12-10-2018 PA257_4480 295012c46804ff795b0190a1443bed2f 513 SUPERFAMILY SSF103473 1 488 6.28E-66 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4480 295012c46804ff795b0190a1443bed2f 513 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_3641 55152f1679191d4281bb9769316c94c4 359 SUPERFAMILY SSF51679 30 352 1.44E-57 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_3641 55152f1679191d4281bb9769316c94c4 359 Gene3D G3DSA:3.20.20.30 17 359 2.7E-71 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_3641 55152f1679191d4281bb9769316c94c4 359 Pfam PF00296 Luciferase-like monooxygenase 37 330 3.6E-50 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_6478 1456515787e86aaed727927f40dab4b5 205 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 144 1.9E-47 T 12-10-2018 IPR006521 Tail protein I PA257_6478 1456515787e86aaed727927f40dab4b5 205 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 7 143 4.4E-61 T 12-10-2018 IPR006521 Tail protein I PA257_0955 e3b91c0d52c386fecc89e9bc3c0fbdeb 597 Gene3D G3DSA:3.30.43.10 70 146 2.9E-29 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PA257_0955 e3b91c0d52c386fecc89e9bc3c0fbdeb 597 Gene3D G3DSA:1.10.45.10 548 596 5.5E-13 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PA257_0955 e3b91c0d52c386fecc89e9bc3c0fbdeb 597 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 22 54 4.1E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PA257_0955 e3b91c0d52c386fecc89e9bc3c0fbdeb 597 Pfam PF01565 FAD binding domain 92 211 2.7E-12 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PA257_0955 e3b91c0d52c386fecc89e9bc3c0fbdeb 597 Gene3D G3DSA:3.40.462.10 275 547 2.6E-128 T 12-10-2018 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily KEGG: 00908+1.5.99.12 PA257_0955 e3b91c0d52c386fecc89e9bc3c0fbdeb 597 SUPERFAMILY SSF56176 62 271 7.01E-35 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_0955 e3b91c0d52c386fecc89e9bc3c0fbdeb 597 Gene3D G3DSA:3.30.465.10 147 274 7.4E-54 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_0955 e3b91c0d52c386fecc89e9bc3c0fbdeb 597 Pfam PF09129 Cholesterol oxidase, substrate-binding 277 597 7.2E-159 T 12-10-2018 IPR015213 Cholesterol oxidase, substrate-binding PA257_0955 e3b91c0d52c386fecc89e9bc3c0fbdeb 597 SUPERFAMILY SSF55103 277 597 5.69E-160 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PA257_1250 3efd1afac94fc8b8067bcec0f900dcb4 331 Pfam PF01136 Peptidase family U32 75 330 2.1E-63 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PA257_1250 3efd1afac94fc8b8067bcec0f900dcb4 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 PA257_2176 19e7cd6c632270b37615ef16d708edfb 212 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.554 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 PA257_2176 19e7cd6c632270b37615ef16d708edfb 212 Gene3D G3DSA:3.20.19.10 1 188 1.5E-77 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 PA257_2176 19e7cd6c632270b37615ef16d708edfb 212 Pfam PF00694 Aconitase C-terminal domain 1 132 2.9E-38 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 PA257_2176 19e7cd6c632270b37615ef16d708edfb 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.3E-89 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 PA257_2176 19e7cd6c632270b37615ef16d708edfb 212 SUPERFAMILY SSF52016 1 203 4.12E-63 T 12-10-2018 PA257_4599 109073f8ff7c56d9d90dd91be448d7c8 613 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 287 1.3E-85 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 PA257_4599 109073f8ff7c56d9d90dd91be448d7c8 613 Gene3D G3DSA:1.20.1530.20 4 391 1.9E-90 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_4599 109073f8ff7c56d9d90dd91be448d7c8 613 SUPERFAMILY SSF51735 407 543 2.8E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4599 109073f8ff7c56d9d90dd91be448d7c8 613 Pfam PF02254 TrkA-N domain 409 520 8.1E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PA257_4599 109073f8ff7c56d9d90dd91be448d7c8 613 Gene3D G3DSA:3.40.50.720 406 567 3.7E-38 T 12-10-2018 PA257_4599 109073f8ff7c56d9d90dd91be448d7c8 613 Pfam PF00999 Sodium/hydrogen exchanger family 13 377 2.7E-70 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PA257_1437 4c4169913a5b81e6a84e623a97006fa9 355 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 20 320 4.7E-123 T 12-10-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 PA257_1437 4c4169913a5b81e6a84e623a97006fa9 355 Gene3D G3DSA:3.40.50.300 130 326 1.0E-53 T 12-10-2018 PA257_1437 4c4169913a5b81e6a84e623a97006fa9 355 Gene3D G3DSA:3.30.450.90 26 129 9.4E-14 T 12-10-2018 PA257_1437 4c4169913a5b81e6a84e623a97006fa9 355 SUPERFAMILY SSF52540 30 298 4.74E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1437 4c4169913a5b81e6a84e623a97006fa9 355 Pfam PF00437 Type II/IV secretion system protein 32 299 2.1E-79 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_1151 af6617d8ca9f504f51e0180847b56b40 381 Pfam PF01098 Cell cycle protein 31 376 3.7E-113 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_1151 af6617d8ca9f504f51e0180847b56b40 381 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_1151 af6617d8ca9f504f51e0180847b56b40 381 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 28 376 9.5E-135 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_1151 af6617d8ca9f504f51e0180847b56b40 381 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 22 378 29.441 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_1767 29c399feda553e35459151998c99babf 328 SUPERFAMILY SSF48613 107 321 5.72E-25 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_1767 29c399feda553e35459151998c99babf 328 Pfam PF14515 Haem-oxygenase-associated N-terminal helices 1 93 5.1E-50 T 12-10-2018 IPR029474 Haem-oxygenase-associated, N-terminal helices PA257_1767 29c399feda553e35459151998c99babf 328 Pfam PF14518 Iron-containing redox enzyme 159 276 1.3E-13 T 12-10-2018 PA257_1767 29c399feda553e35459151998c99babf 328 Gene3D G3DSA:1.20.910.10 103 328 4.0E-53 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_1767 29c399feda553e35459151998c99babf 328 Gene3D G3DSA:1.10.1240.20 6 93 3.2E-48 T 12-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 PA257_1767 29c399feda553e35459151998c99babf 328 SMART SM01236 174 276 3.7E-21 T 12-10-2018 PA257_2894 42500bdd922b972d40696b9b59b7a585 102 Gene3D G3DSA:3.10.450.40 29 102 2.3E-10 T 12-10-2018 PA257_2894 42500bdd922b972d40696b9b59b7a585 102 Pfam PF03413 Peptidase propeptide and YPEB domain 41 98 1.4E-13 T 12-10-2018 IPR025711 PepSY domain PA257_1244 cc6d45ad6293c2951cc454ede4298ae2 142 Gene3D G3DSA:3.40.50.2300 3 134 7.2E-31 T 12-10-2018 PA257_1244 cc6d45ad6293c2951cc454ede4298ae2 142 SMART SM00226 5 133 7.4E-24 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PA257_1244 cc6d45ad6293c2951cc454ede4298ae2 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 6.4E-5 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PA257_1244 cc6d45ad6293c2951cc454ede4298ae2 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 6.4E-5 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PA257_1244 cc6d45ad6293c2951cc454ede4298ae2 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 6.4E-5 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PA257_1244 cc6d45ad6293c2951cc454ede4298ae2 142 SUPERFAMILY SSF52788 5 132 3.14E-31 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily PA257_1244 cc6d45ad6293c2951cc454ede4298ae2 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 131 1.6E-20 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PA257_0691 708d168ad454173ebc428cc880fa11ed 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 333 9.1E-166 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PA257_0691 708d168ad454173ebc428cc880fa11ed 665 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PA257_0691 708d168ad454173ebc428cc880fa11ed 665 Gene3D G3DSA:3.40.50.970 3 325 2.2E-132 T 12-10-2018 PA257_0691 708d168ad454173ebc428cc880fa11ed 665 Gene3D G3DSA:3.40.50.970 326 537 3.5E-83 T 12-10-2018 PA257_0691 708d168ad454173ebc428cc880fa11ed 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 663 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 PA257_0691 708d168ad454173ebc428cc880fa11ed 665 SUPERFAMILY SSF52518 5 320 7.23E-122 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_0691 708d168ad454173ebc428cc880fa11ed 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PA257_0691 708d168ad454173ebc428cc880fa11ed 665 SUPERFAMILY SSF52518 347 526 1.01E-67 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_0691 708d168ad454173ebc428cc880fa11ed 665 Gene3D G3DSA:3.40.50.920 538 665 1.2E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_0691 708d168ad454173ebc428cc880fa11ed 665 SUPERFAMILY SSF52922 533 664 5.1E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_0691 708d168ad454173ebc428cc880fa11ed 665 SMART SM00861 354 525 1.3E-69 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_0691 708d168ad454173ebc428cc880fa11ed 665 Pfam PF02779 Transketolase, pyrimidine binding domain 353 525 1.3E-45 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_0691 708d168ad454173ebc428cc880fa11ed 665 Pfam PF02780 Transketolase, C-terminal domain 540 655 2.4E-15 T 12-10-2018 IPR033248 Transketolase, C-terminal domain PA257_3143 6ad9ae7574a24a283228711003b1d4ed 368 PIRSF PIRSF016624 1 368 2.2E-76 T 12-10-2018 IPR012106 Protease, Mu phage/prophage I type PA257_3143 6ad9ae7574a24a283228711003b1d4ed 368 Pfam PF10123 Mu-like prophage I protein 27 363 8.6E-104 T 12-10-2018 IPR012106 Protease, Mu phage/prophage I type PA257_4701 2b282482eb5d1a0f0e7bb8c022081773 73 Pfam PF09905 DNA-binding protein VF530 6 66 6.4E-34 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 PA257_4701 2b282482eb5d1a0f0e7bb8c022081773 73 Gene3D G3DSA:1.10.720.30 12 71 1.3E-30 T 12-10-2018 IPR036361 SAP domain superfamily PA257_4775 1b1d33c0e6729ec7007981f7e67e9c66 381 Gene3D G3DSA:3.40.710.30 4 381 1.5E-122 T 12-10-2018 PA257_4775 1b1d33c0e6729ec7007981f7e67e9c66 381 SUPERFAMILY SSF56601 7 374 1.52E-77 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_4775 1b1d33c0e6729ec7007981f7e67e9c66 381 Pfam PF00144 Beta-lactamase 18 373 3.2E-78 T 12-10-2018 IPR001466 Beta-lactamase-related PA257_0734 2f979bffb9c9d75feb01564ea3123238 517 Pfam PF04293 SpoVR like protein 12 443 1.4E-177 T 12-10-2018 IPR007390 Sporulation stage V, protein R PA257_4296 b212f190c322bb5668f5b23206e972aa 304 Pfam PF03253 Urea transporter 11 282 2.8E-50 T 12-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 PA257_4296 b212f190c322bb5668f5b23206e972aa 304 PIRSF PIRSF016502 3 303 1.1E-70 T 12-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 PA257_4296 b212f190c322bb5668f5b23206e972aa 304 Gene3D G3DSA:1.10.3430.10 1 294 3.7E-53 T 12-10-2018 IPR029020 Ammonium/urea transporter PA257_4985 a5ea77eda76eef6f44380f2e487c8d24 57 TIGRFAM TIGR03510 XapX: XapX domain 2 48 1.4E-20 T 12-10-2018 IPR020017 XapX domain PA257_4985 a5ea77eda76eef6f44380f2e487c8d24 57 Pfam PF07235 Protein of unknown function (DUF1427) 2 53 1.6E-22 T 12-10-2018 IPR009872 Protein of unknown function DUF1427 PA257_2643 57be083dfb201f0bd2b803be66ac31c7 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 62 3.2E-25 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA PA257_3565 2fb2703ab860aab514a9eb02f14f4e3d 101 Pfam PF11154 Protein of unknown function (DUF2934) 4 38 1.9E-14 T 12-10-2018 IPR021327 Protein of unknown function DUF2934 PA257_6847 e899fbea9fed988fb4c8cad9c67a99c8 375 Pfam PF13439 Glycosyltransferase Family 4 16 171 8.1E-9 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PA257_6847 e899fbea9fed988fb4c8cad9c67a99c8 375 Pfam PF00534 Glycosyl transferases group 1 198 335 5.3E-26 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_6847 e899fbea9fed988fb4c8cad9c67a99c8 375 Gene3D G3DSA:3.40.50.2000 172 353 1.2E-52 T 12-10-2018 PA257_6847 e899fbea9fed988fb4c8cad9c67a99c8 375 Gene3D G3DSA:3.40.50.2000 102 369 1.2E-52 T 12-10-2018 PA257_6847 e899fbea9fed988fb4c8cad9c67a99c8 375 SUPERFAMILY SSF53756 11 373 3.1E-66 T 12-10-2018 PA257_5623 45b5f57ff7cf7b6d1797ca2c5fb0724b 235 Gene3D G3DSA:3.90.75.20 110 207 3.9E-8 T 12-10-2018 PA257_5623 45b5f57ff7cf7b6d1797ca2c5fb0724b 235 SUPERFAMILY SSF54060 132 204 3.06E-12 T 12-10-2018 PA257_5623 45b5f57ff7cf7b6d1797ca2c5fb0724b 235 Pfam PF13392 HNH endonuclease 158 201 1.1E-15 T 12-10-2018 IPR003615 HNH nuclease PA257_5262 1dcca3a61d1d6c9ebda694948d4d8a28 235 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 190 232 7.8E-10 T 12-10-2018 IPR019219 Protein of unknown function DUF2130 PA257_4217 66d19af8384e778232c488a2c226b9db 502 Pfam PF07690 Major Facilitator Superfamily 336 474 1.8E-8 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4217 66d19af8384e778232c488a2c226b9db 502 Pfam PF07690 Major Facilitator Superfamily 72 323 2.3E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4217 66d19af8384e778232c488a2c226b9db 502 Gene3D G3DSA:1.20.1250.20 57 261 5.2E-42 T 12-10-2018 PA257_4217 66d19af8384e778232c488a2c226b9db 502 SUPERFAMILY SSF103473 53 476 1.19E-56 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4217 66d19af8384e778232c488a2c226b9db 502 PIRSF PIRSF002808 43 489 3.7E-76 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 PA257_4217 66d19af8384e778232c488a2c226b9db 502 Gene3D G3DSA:1.20.1250.20 288 480 2.3E-27 T 12-10-2018 PA257_1382 8ae88345d773ecf1f393400f27aa6b57 131 Pfam PF14248 Domain of unknown function (DUF4345) 7 121 3.6E-16 T 12-10-2018 IPR025597 Protein of unknown function DUF4345 PA257_2816 a74090c3646733e84a81e83c7c3dae39 94 Pfam PF14267 Domain of unknown function (DUF4357) 34 87 1.3E-22 T 12-10-2018 IPR025579 Domain of unknown function DUF4357 PA257_1546 306fc67e9cd4f2bd706202ea4f50db2f 226 Pfam PF13852 Protein of unknown function (DUF4197) 25 223 3.2E-76 T 12-10-2018 IPR025245 Protein of unknown function DUF4197 PA257_4826 0b0a6bcade75c18c926b8c360a85d706 301 SMART SM00849 21 221 2.0E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_4826 0b0a6bcade75c18c926b8c360a85d706 301 SUPERFAMILY SSF56281 14 269 1.02E-52 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_4826 0b0a6bcade75c18c926b8c360a85d706 301 Pfam PF00753 Metallo-beta-lactamase superfamily 18 221 2.0E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_4826 0b0a6bcade75c18c926b8c360a85d706 301 Gene3D G3DSA:3.60.15.10 1 301 2.8E-124 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_6560 3bbe32fe7915080dc5f9248e72216b9a 225 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 8 224 2.9E-55 T 12-10-2018 IPR002727 Protein of unknown function DUF47 PA257_6560 3bbe32fe7915080dc5f9248e72216b9a 225 Gene3D G3DSA:1.20.58.220 1 225 6.4E-62 T 12-10-2018 IPR038078 PhoU-like domain superfamily PA257_6560 3bbe32fe7915080dc5f9248e72216b9a 225 SUPERFAMILY SSF109755 37 209 1.92E-10 T 12-10-2018 PA257_6560 3bbe32fe7915080dc5f9248e72216b9a 225 Pfam PF01865 Protein of unknown function DUF47 7 224 3.7E-60 T 12-10-2018 IPR018445 Putative phosphate transport regulator PA257_6941 a7ccff6bd3f54687dda5acd52fa7f0f0 134 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 15 123 4.5E-40 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PA257_6941 a7ccff6bd3f54687dda5acd52fa7f0f0 134 SUPERFAMILY SSF57716 93 131 2.71E-9 T 12-10-2018 PA257_6941 a7ccff6bd3f54687dda5acd52fa7f0f0 134 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 91 126 4.2E-11 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PA257_6941 a7ccff6bd3f54687dda5acd52fa7f0f0 134 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 11 132 27.461 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PA257_6941 a7ccff6bd3f54687dda5acd52fa7f0f0 134 Gene3D G3DSA:1.20.120.910 1 134 1.0E-52 T 12-10-2018 PA257_6941 a7ccff6bd3f54687dda5acd52fa7f0f0 134 SUPERFAMILY SSF109635 1 92 3.92E-24 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily PA257_3266 f4ae11b6a5cea2db882d34675be3fa09 131 Pfam PF14107 Domain of unknown function (DUF4280) 6 125 2.5E-27 T 12-10-2018 IPR025460 Protein of unknown function DUF4280 PA257_5323 34a0f8f21836bb3f008df9bf1400324b 124 Gene3D G3DSA:3.30.1300.30 39 121 5.4E-9 T 12-10-2018 PA257_5323 34a0f8f21836bb3f008df9bf1400324b 124 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5323 34a0f8f21836bb3f008df9bf1400324b 124 TIGRFAM TIGR01707 gspI: type II secretion system protein I 9 107 1.2E-36 T 12-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 PA257_5323 34a0f8f21836bb3f008df9bf1400324b 124 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 3.6E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5323 34a0f8f21836bb3f008df9bf1400324b 124 SUPERFAMILY SSF54523 41 120 2.04E-13 T 12-10-2018 PA257_5323 34a0f8f21836bb3f008df9bf1400324b 124 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 1.8E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5323 34a0f8f21836bb3f008df9bf1400324b 124 Pfam PF02501 Type II secretion system (T2SS), protein I 43 120 6.4E-19 T 12-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 PA257_5122 f7f245d696b84604a11f9ea88df3d64c 101 SUPERFAMILY SSF103481 5 100 1.96E-19 T 12-10-2018 PA257_5122 f7f245d696b84604a11f9ea88df3d64c 101 Gene3D G3DSA:1.10.3730.20 1 101 7.7E-28 T 12-10-2018 PA257_5122 f7f245d696b84604a11f9ea88df3d64c 101 Pfam PF00893 Small Multidrug Resistance protein 1 93 5.7E-24 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 PA257_6638 fd6004364752b460da32e4c8d0ab7ff3 389 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_6638 fd6004364752b460da32e4c8d0ab7ff3 389 SUPERFAMILY SSF103473 5 381 2.22E-29 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6638 fd6004364752b460da32e4c8d0ab7ff3 389 Pfam PF07690 Major Facilitator Superfamily 11 331 2.8E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6638 fd6004364752b460da32e4c8d0ab7ff3 389 Gene3D G3DSA:1.20.1250.20 1 376 3.0E-30 T 12-10-2018 PA257_5993 be397afd9649fdf08da659e07f4260b4 375 Gene3D G3DSA:3.40.50.150 110 356 7.3E-72 T 12-10-2018 PA257_5993 be397afd9649fdf08da659e07f4260b4 375 SUPERFAMILY SSF53335 58 334 2.32E-68 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5993 be397afd9649fdf08da659e07f4260b4 375 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 58 342 33.146 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PA257_5993 be397afd9649fdf08da659e07f4260b4 375 Pfam PF17284 Spermidine synthase tetramerisation domain 69 110 3.8E-9 T 12-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PA257_5993 be397afd9649fdf08da659e07f4260b4 375 Gene3D G3DSA:2.30.140.10 53 109 2.0E-9 T 12-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PA257_5993 be397afd9649fdf08da659e07f4260b4 375 Pfam PF01564 Spermine/spermidine synthase domain 114 287 7.1E-38 T 12-10-2018 PA257_5993 be397afd9649fdf08da659e07f4260b4 375 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 134 147 - T 12-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PA257_0362 8554618fbdbd87a7da82997bf3cb4521 458 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PA257_0362 8554618fbdbd87a7da82997bf3cb4521 458 Pfam PF00120 Glutamine synthetase, catalytic domain 121 454 1.8E-109 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_0362 8554618fbdbd87a7da82997bf3cb4521 458 Gene3D G3DSA:3.10.20.70 12 122 1.3E-8 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_0362 8554618fbdbd87a7da82997bf3cb4521 458 SUPERFAMILY SSF54368 14 119 3.27E-18 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_0362 8554618fbdbd87a7da82997bf3cb4521 458 SUPERFAMILY SSF55931 122 456 1.57E-101 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PA257_0362 8554618fbdbd87a7da82997bf3cb4521 458 Gene3D G3DSA:3.30.590.10 123 458 8.4E-104 T 12-10-2018 PA257_0362 8554618fbdbd87a7da82997bf3cb4521 458 SMART SM01230 120 376 4.7E-96 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PA257_2591 c782bb84e08bf7ca42af3161e4ab9c5a 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 103 1.3E-11 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_2591 c782bb84e08bf7ca42af3161e4ab9c5a 177 SUPERFAMILY SSF69118 1 175 2.76E-46 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_2591 c782bb84e08bf7ca42af3161e4ab9c5a 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 42 121 1.5E-14 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_2591 c782bb84e08bf7ca42af3161e4ab9c5a 177 Gene3D G3DSA:1.20.1290.10 14 175 1.3E-39 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_4376 8df46c9e22d53a04ab597ee3e1a2d064 463 Gene3D G3DSA:1.20.1730.10 21 461 1.7E-80 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily PA257_4376 8df46c9e22d53a04ab597ee3e1a2d064 463 Pfam PF00474 Sodium:solute symporter family 32 416 2.2E-41 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 PA257_4996 0feb2ffc39b198d6a70e1878031e434a 207 Pfam PF02525 Flavodoxin-like fold 17 202 6.3E-31 T 12-10-2018 IPR003680 Flavodoxin-like fold PA257_4996 0feb2ffc39b198d6a70e1878031e434a 207 Gene3D G3DSA:3.40.50.360 15 207 6.7E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_4996 0feb2ffc39b198d6a70e1878031e434a 207 SUPERFAMILY SSF52218 17 207 2.1E-43 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_2693 d4e6832c35a3ff554fa1317ab04b9689 116 SUPERFAMILY SSF103084 2 109 3.4E-16 T 12-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 PA257_2693 d4e6832c35a3ff554fa1317ab04b9689 116 Gene3D G3DSA:3.30.1330.70 1 113 2.6E-6 T 12-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 PA257_2693 d4e6832c35a3ff554fa1317ab04b9689 116 Pfam PF05866 Endodeoxyribonuclease RusA 2 108 4.6E-26 T 12-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 PA257_1531 225d6706996735e0176149aa1408d404 738 Gene3D G3DSA:3.40.1110.10 442 562 7.1E-83 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PA257_1531 225d6706996735e0176149aa1408d404 738 PRINTS PR00941 Cadmium-transporting ATPase signature 215 235 1.6E-10 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PA257_1531 225d6706996735e0176149aa1408d404 738 PRINTS PR00941 Cadmium-transporting ATPase signature 296 312 1.6E-10 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PA257_1531 225d6706996735e0176149aa1408d404 738 PRINTS PR00941 Cadmium-transporting ATPase signature 315 329 1.6E-10 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PA257_1531 225d6706996735e0176149aa1408d404 738 Pfam PF00702 haloacid dehalogenase-like hydrolase 429 644 2.6E-41 T 12-10-2018 PA257_1531 225d6706996735e0176149aa1408d404 738 Pfam PF00122 E1-E2 ATPase 231 410 1.9E-54 T 12-10-2018 PA257_1531 225d6706996735e0176149aa1408d404 738 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 180 733 4.2E-175 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PA257_1531 225d6706996735e0176149aa1408d404 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 431 445 6.4E-21 T 12-10-2018 PA257_1531 225d6706996735e0176149aa1408d404 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 280 294 6.4E-21 T 12-10-2018 PA257_1531 225d6706996735e0176149aa1408d404 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 577 587 6.4E-21 T 12-10-2018 PA257_1531 225d6706996735e0176149aa1408d404 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 649 6.4E-21 T 12-10-2018 PA257_1531 225d6706996735e0176149aa1408d404 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 666 6.4E-21 T 12-10-2018 PA257_1531 225d6706996735e0176149aa1408d404 738 SUPERFAMILY SSF81653 233 330 2.48E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PA257_1531 225d6706996735e0176149aa1408d404 738 SUPERFAMILY SSF55008 39 109 6.03E-10 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_1531 225d6706996735e0176149aa1408d404 738 SUPERFAMILY SSF56784 430 730 4.83E-52 T 12-10-2018 IPR036412 HAD-like superfamily PA257_1531 225d6706996735e0176149aa1408d404 738 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 433 439 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PA257_1531 225d6706996735e0176149aa1408d404 738 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 530 706 1.4E-38 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_1531 225d6706996735e0176149aa1408d404 738 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 203 456 6.5E-37 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PA257_1531 225d6706996735e0176149aa1408d404 738 Gene3D G3DSA:2.70.150.20 219 334 3.0E-34 T 12-10-2018 PA257_1531 225d6706996735e0176149aa1408d404 738 SUPERFAMILY SSF81665 181 418 3.27E-14 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PA257_1531 225d6706996735e0176149aa1408d404 738 Gene3D G3DSA:3.40.50.1000 412 683 7.1E-83 T 12-10-2018 IPR023214 HAD superfamily PA257_4137 07052f921eb76033b428f9960c5db06d 202 SUPERFAMILY SSF50475 2 198 6.42E-43 T 12-10-2018 PA257_4137 07052f921eb76033b428f9960c5db06d 202 Pfam PF01613 Flavin reductase like domain 22 165 4.5E-18 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PA257_4137 07052f921eb76033b428f9960c5db06d 202 SMART SM00903 19 174 2.5E-15 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PA257_4137 07052f921eb76033b428f9960c5db06d 202 Gene3D G3DSA:2.30.110.10 1 202 1.4E-61 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PA257_2060 178562fce6e7e0f675d25c5ba1a09eb3 374 SUPERFAMILY SSF55729 174 344 2.28E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_2060 178562fce6e7e0f675d25c5ba1a09eb3 374 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 373 1.1E-147 T 12-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition PA257_2104 72ca34737a274ccfc5ddc0a784297d3d 608 SUPERFAMILY SSF143975 1 418 1.03E-147 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PA257_2104 72ca34737a274ccfc5ddc0a784297d3d 608 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 601 0.0 T 12-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 PA257_2104 72ca34737a274ccfc5ddc0a784297d3d 608 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PA257_2104 72ca34737a274ccfc5ddc0a784297d3d 608 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 1 601 58.995 T 12-10-2018 PA257_2104 72ca34737a274ccfc5ddc0a784297d3d 608 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PA257_2104 72ca34737a274ccfc5ddc0a784297d3d 608 Gene3D G3DSA:3.50.30.80 419 568 9.2E-51 T 12-10-2018 PA257_2104 72ca34737a274ccfc5ddc0a784297d3d 608 Pfam PF00920 Dehydratase family 66 597 4.9E-162 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PA257_2104 72ca34737a274ccfc5ddc0a784297d3d 608 SUPERFAMILY SSF52016 419 600 8.63E-58 T 12-10-2018 PA257_1864 bd9afea275faf50b8d29373799549699 883 Pfam PF07715 TonB-dependent Receptor Plug Domain 142 249 4.3E-18 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_1864 bd9afea275faf50b8d29373799549699 883 Gene3D G3DSA:2.40.170.20 265 883 2.7E-146 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_1864 bd9afea275faf50b8d29373799549699 883 Pfam PF00593 TonB dependent receptor 370 881 5.9E-50 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_1864 bd9afea275faf50b8d29373799549699 883 Gene3D G3DSA:3.55.50.30 35 135 8.3E-23 T 12-10-2018 PA257_1864 bd9afea275faf50b8d29373799549699 883 Gene3D G3DSA:2.170.130.10 137 264 4.2E-48 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_1864 bd9afea275faf50b8d29373799549699 883 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 120 883 2.3E-201 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 PA257_1864 bd9afea275faf50b8d29373799549699 883 SMART SM00965 67 118 3.3E-5 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_1864 bd9afea275faf50b8d29373799549699 883 SUPERFAMILY SSF56935 130 883 7.12E-90 T 12-10-2018 PA257_1864 bd9afea275faf50b8d29373799549699 883 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 126 883 4.2E-249 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 PA257_3011 8e5ae643693f2227d3d08561ffa95313 564 Pfam PF00501 AMP-binding enzyme 24 456 7.4E-104 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3011 8e5ae643693f2227d3d08561ffa95313 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3011 8e5ae643693f2227d3d08561ffa95313 564 Gene3D G3DSA:3.40.50.12780 14 452 1.5E-118 T 12-10-2018 PA257_3011 8e5ae643693f2227d3d08561ffa95313 564 SUPERFAMILY SSF56801 16 551 1.44E-157 T 12-10-2018 PA257_3011 8e5ae643693f2227d3d08561ffa95313 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 465 540 1.6E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_3011 8e5ae643693f2227d3d08561ffa95313 564 Gene3D G3DSA:3.30.300.310 453 553 3.0E-32 T 12-10-2018 PA257_5132 50fc00becbec2943a293667f9f42a6e3 250 Gene3D G3DSA:3.40.190.10 46 239 3.8E-6 T 12-10-2018 PA257_5132 50fc00becbec2943a293667f9f42a6e3 250 Gene3D G3DSA:3.40.190.10 99 207 3.8E-6 T 12-10-2018 PA257_5132 50fc00becbec2943a293667f9f42a6e3 250 SUPERFAMILY SSF53850 21 245 1.52E-19 T 12-10-2018 PA257_6272 b63289237b1c6f44abe27962d3fa329b 363 Gene3D G3DSA:3.40.190.10 146 347 1.5E-109 T 12-10-2018 PA257_6272 b63289237b1c6f44abe27962d3fa329b 363 Gene3D G3DSA:3.40.190.10 46 341 1.5E-109 T 12-10-2018 PA257_6272 b63289237b1c6f44abe27962d3fa329b 363 Pfam PF13416 Bacterial extracellular solute-binding protein 63 327 2.4E-40 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_6272 b63289237b1c6f44abe27962d3fa329b 363 SUPERFAMILY SSF53850 44 360 2.93E-59 T 12-10-2018 PA257_5490 c2515bf1fdbaccbf4b6545f830e7e39c 604 SUPERFAMILY SSF53822 251 599 2.71E-82 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_5490 c2515bf1fdbaccbf4b6545f830e7e39c 604 Gene3D G3DSA:1.25.40.650 147 250 3.6E-17 T 12-10-2018 PA257_5490 c2515bf1fdbaccbf4b6545f830e7e39c 604 Gene3D G3DSA:3.40.50.2300 254 587 1.9E-90 T 12-10-2018 PA257_5490 c2515bf1fdbaccbf4b6545f830e7e39c 604 Gene3D G3DSA:3.40.50.2300 360 588 1.9E-90 T 12-10-2018 PA257_5490 c2515bf1fdbaccbf4b6545f830e7e39c 604 Pfam PF04348 LppC putative lipoprotein 33 594 3.7E-221 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA PA257_2405 2bb6b7a3b5abb5043e0856181e6c4a10 208 SUPERFAMILY SSF63965 1 205 3.14E-74 T 12-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 PA257_2405 2bb6b7a3b5abb5043e0856181e6c4a10 208 Gene3D G3DSA:3.40.50.10230 1 208 1.0E-85 T 12-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 PA257_2405 2bb6b7a3b5abb5043e0856181e6c4a10 208 Pfam PF02570 Precorrin-8X methylmutase 11 205 4.2E-73 T 12-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 PA257_0887 606a7f1eed59ac17302cd5b7f2f3ea95 334 Gene3D G3DSA:1.10.10.10 1 88 1.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0887 606a7f1eed59ac17302cd5b7f2f3ea95 334 Gene3D G3DSA:3.40.50.150 89 334 2.2E-65 T 12-10-2018 PA257_0887 606a7f1eed59ac17302cd5b7f2f3ea95 334 Pfam PF16864 Dimerisation domain 12 86 1.1E-6 T 12-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain PA257_0887 606a7f1eed59ac17302cd5b7f2f3ea95 334 Pfam PF00891 O-methyltransferase 100 316 1.7E-30 T 12-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 PA257_0887 606a7f1eed59ac17302cd5b7f2f3ea95 334 SUPERFAMILY SSF46785 10 89 5.99E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0887 606a7f1eed59ac17302cd5b7f2f3ea95 334 PIRSF PIRSF005739 1 332 2.0E-37 T 12-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 PA257_0887 606a7f1eed59ac17302cd5b7f2f3ea95 334 SUPERFAMILY SSF53335 95 330 2.13E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3767 34812ef0dc97ca635d7498785c29cc54 399 SUPERFAMILY SSF56935 34 398 2.75E-28 T 12-10-2018 PA257_3767 34812ef0dc97ca635d7498785c29cc54 399 Pfam PF13609 Gram-negative porin 27 378 2.2E-24 T 12-10-2018 PA257_3767 34812ef0dc97ca635d7498785c29cc54 399 Gene3D G3DSA:2.40.160.10 46 398 1.2E-11 T 12-10-2018 IPR023614 Porin domain superfamily PA257_5920 29cd1ad16127923e97d3f084abf0050a 297 Gene3D G3DSA:3.40.50.1980 148 297 7.7E-58 T 12-10-2018 PA257_5920 29cd1ad16127923e97d3f084abf0050a 297 SUPERFAMILY SSF53807 27 286 3.61E-49 T 12-10-2018 PA257_5920 29cd1ad16127923e97d3f084abf0050a 297 Gene3D G3DSA:3.40.50.1980 26 147 3.7E-43 T 12-10-2018 PA257_5920 29cd1ad16127923e97d3f084abf0050a 297 Pfam PF01497 Periplasmic binding protein 31 263 2.4E-31 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 Gene3D G3DSA:3.30.420.40 194 361 2.2E-109 T 12-10-2018 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 Gene3D G3DSA:2.60.34.10 379 518 3.6E-50 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 Gene3D G3DSA:3.30.420.40 22 374 2.2E-109 T 12-10-2018 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 SUPERFAMILY SSF100934 504 615 2.75E-33 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 1.4E-282 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 Gene3D G3DSA:3.90.640.10 238 311 2.2E-109 T 12-10-2018 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 SUPERFAMILY SSF53067 200 376 1.57E-47 T 12-10-2018 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 Gene3D G3DSA:1.20.1270.10 520 616 1.4E-25 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 45.485 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 SUPERFAMILY SSF100920 384 535 2.75E-50 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.4E-56 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.4E-56 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.4E-56 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.4E-56 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.4E-56 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.4E-56 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.4E-56 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.4E-56 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 Pfam PF00012 Hsp70 protein 21 600 1.4E-182 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_1358 ea38720499ce901a0c321f67eb04f44d 619 SUPERFAMILY SSF53067 19 197 8.74E-52 T 12-10-2018 PA257_1576 a9c7790e5cafa0a47c4ae5cecdff8410 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 145 36.125 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_1576 a9c7790e5cafa0a47c4ae5cecdff8410 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 142 4.7E-65 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_1576 a9c7790e5cafa0a47c4ae5cecdff8410 146 SUPERFAMILY SSF54637 1 142 3.67E-53 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_1576 a9c7790e5cafa0a47c4ae5cecdff8410 146 Pfam PF07977 FabA-like domain 11 137 1.2E-38 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_1576 a9c7790e5cafa0a47c4ae5cecdff8410 146 Gene3D G3DSA:3.10.129.10 3 146 5.6E-68 T 12-10-2018 PA257_3675 00a2ba51230a907ee8cace56d44ebde3 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 505 8.1E-71 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain PA257_3675 00a2ba51230a907ee8cace56d44ebde3 602 SUPERFAMILY SSF53850 48 590 3.08E-116 T 12-10-2018 PA257_3675 00a2ba51230a907ee8cace56d44ebde3 602 PIRSF PIRSF002741 5 594 2.8E-104 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PA257_3675 00a2ba51230a907ee8cace56d44ebde3 602 Gene3D G3DSA:3.10.105.10 311 569 3.5E-240 T 12-10-2018 PA257_3675 00a2ba51230a907ee8cace56d44ebde3 602 Gene3D G3DSA:3.40.190.10 24 589 3.5E-240 T 12-10-2018 PA257_4097 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Pfam PF05175 Methyltransferase small domain 122 208 9.7E-16 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PA257_4097 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_4097 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 PIRSF PIRSF037167 1 300 5.6E-140 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PA257_4097 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 8 286 4.4E-80 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PA257_4097 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 6 287 5.9E-131 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PA257_4097 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 293 52.859 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PA257_4097 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 SUPERFAMILY SSF53335 9 286 6.2E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_4097 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Gene3D G3DSA:1.10.8.10 7 99 9.9E-8 T 12-10-2018 PA257_4097 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Gene3D G3DSA:3.40.50.150 102 278 2.1E-45 T 12-10-2018 PA257_4454 f507412d903035669dae64a986e2522f 244 Pfam PF00005 ABC transporter 17 165 1.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4454 f507412d903035669dae64a986e2522f 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4454 f507412d903035669dae64a986e2522f 244 Gene3D G3DSA:3.40.50.300 1 243 1.0E-74 T 12-10-2018 PA257_4454 f507412d903035669dae64a986e2522f 244 SMART SM00382 26 213 4.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4454 f507412d903035669dae64a986e2522f 244 PIRSF PIRSF039085 1 243 1.6E-102 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PA257_4454 f507412d903035669dae64a986e2522f 244 SUPERFAMILY SSF52540 1 226 3.59E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5225 f20f9559e3efd29671875963ab2edae6 956 SUPERFAMILY SSF52540 481 870 6.54E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5225 f20f9559e3efd29671875963ab2edae6 956 Gene3D G3DSA:3.40.50.300 710 900 3.9E-17 T 12-10-2018 PA257_5225 f20f9559e3efd29671875963ab2edae6 956 Gene3D G3DSA:3.40.50.300 507 703 6.7E-9 T 12-10-2018 PA257_5225 f20f9559e3efd29671875963ab2edae6 956 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 51 946 0.0 T 12-10-2018 IPR022303 Conjugative transfer ATPase PA257_5225 f20f9559e3efd29671875963ab2edae6 956 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 62 335 1.1E-72 T 12-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase PA257_2028 35423628047c5795295414fbf817195b 103 SUPERFAMILY SSF47413 49 98 9.92E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_2028 35423628047c5795295414fbf817195b 103 SMART SM00530 49 103 1.0E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_2028 35423628047c5795295414fbf817195b 103 Pfam PF01381 Helix-turn-helix 51 99 3.4E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_2028 35423628047c5795295414fbf817195b 103 Gene3D G3DSA:1.10.260.40 47 102 6.2E-13 T 12-10-2018 PA257_3892 c1cdbce98b2c5076f04e079ae816f1e7 275 SUPERFAMILY SSF53335 13 249 1.23E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3892 c1cdbce98b2c5076f04e079ae816f1e7 275 Gene3D G3DSA:3.40.50.150 7 246 3.6E-39 T 12-10-2018 PA257_3892 c1cdbce98b2c5076f04e079ae816f1e7 275 Pfam PF04072 Leucine carboxyl methyltransferase 19 175 9.4E-19 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 PA257_3892 c1cdbce98b2c5076f04e079ae816f1e7 275 PIRSF PIRSF028177 1 274 7.1E-97 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 PA257_6368 763d15a090019a33143b4b6921deae5b 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 257 4.4E-57 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6368 763d15a090019a33143b4b6921deae5b 266 SUPERFAMILY SSF53850 1 258 1.71E-67 T 12-10-2018 PA257_6368 763d15a090019a33143b4b6921deae5b 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site PA257_6368 763d15a090019a33143b4b6921deae5b 266 SMART SM00079 35 258 1.6E-5 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PA257_6368 763d15a090019a33143b4b6921deae5b 266 Gene3D G3DSA:3.40.190.10 36 256 3.8E-69 T 12-10-2018 PA257_6368 763d15a090019a33143b4b6921deae5b 266 Gene3D G3DSA:3.40.190.10 120 218 3.8E-69 T 12-10-2018 PA257_6368 763d15a090019a33143b4b6921deae5b 266 SMART SM00062 35 259 2.2E-57 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_3984 125493eb21e869e4a47d797ebe6edaa3 402 Pfam PF13379 NMT1-like family 16 267 2.0E-89 T 12-10-2018 PA257_3984 125493eb21e869e4a47d797ebe6edaa3 402 Gene3D G3DSA:3.40.190.10 23 376 1.8E-116 T 12-10-2018 PA257_3984 125493eb21e869e4a47d797ebe6edaa3 402 Gene3D G3DSA:3.40.190.10 110 381 1.8E-116 T 12-10-2018 PA257_3984 125493eb21e869e4a47d797ebe6edaa3 402 SUPERFAMILY SSF53850 22 257 5.01E-26 T 12-10-2018 PA257_1841 c33d5ba4beb8db643a031949eb5038ce 259 Gene3D G3DSA:3.40.225.10 9 259 2.7E-72 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PA257_1841 c33d5ba4beb8db643a031949eb5038ce 259 SMART SM01007 24 203 4.8E-56 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal PA257_1841 c33d5ba4beb8db643a031949eb5038ce 259 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 25 203 3.6E-43 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal PA257_1841 c33d5ba4beb8db643a031949eb5038ce 259 SUPERFAMILY SSF53639 19 220 2.55E-57 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PA257_2575 3d7edd86039a1956a46e4db074cb5296 179 Gene3D G3DSA:3.30.1060.10 2 168 1.1E-70 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2575 3d7edd86039a1956a46e4db074cb5296 179 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 2 157 33.776 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2575 3d7edd86039a1956a46e4db074cb5296 179 Pfam PF01625 Peptide methionine sulfoxide reductase 5 151 3.5E-57 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2575 3d7edd86039a1956a46e4db074cb5296 179 SUPERFAMILY SSF55068 3 159 1.16E-63 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_2575 3d7edd86039a1956a46e4db074cb5296 179 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 151 7.6E-50 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PA257_6437 48eb1d2e7b0257e239de8edb05b3472c 212 SUPERFAMILY SSF52317 2 208 4.3E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_6437 48eb1d2e7b0257e239de8edb05b3472c 212 PIRSF PIRSF000495 2 210 4.3E-66 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PA257_6437 48eb1d2e7b0257e239de8edb05b3472c 212 Gene3D G3DSA:3.40.50.880 1 210 1.3E-71 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_6437 48eb1d2e7b0257e239de8edb05b3472c 212 Pfam PF00117 Glutamine amidotransferase class-I 6 206 1.1E-18 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_6437 48eb1d2e7b0257e239de8edb05b3472c 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 208 34.329 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PA257_6437 48eb1d2e7b0257e239de8edb05b3472c 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 207 4.9E-66 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PA257_4542 3ae4b53df71179301cbe83b5b6918dc8 214 SUPERFAMILY SSF161098 14 198 4.45E-38 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4542 3ae4b53df71179301cbe83b5b6918dc8 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 107 1.0E-14 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_4542 3ae4b53df71179301cbe83b5b6918dc8 214 Gene3D G3DSA:1.10.3720.10 7 214 1.1E-42 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4542 3ae4b53df71179301cbe83b5b6918dc8 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 212 5.8E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_5575 bce39712d7325aa04bbf0f242a4adc7b 303 SUPERFAMILY SSF161098 94 281 4.32E-29 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5575 bce39712d7325aa04bbf0f242a4adc7b 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 300 9.2E-31 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_5575 bce39712d7325aa04bbf0f242a4adc7b 303 Gene3D G3DSA:1.10.3720.10 89 296 3.2E-23 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5575 bce39712d7325aa04bbf0f242a4adc7b 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 70 8.6E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PA257_1677 14db849b327a9e00f35bd9bd222e68d0 440 PIRSF PIRSF006060 1 435 9.2E-69 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_1677 14db849b327a9e00f35bd9bd222e68d0 440 Gene3D G3DSA:1.20.1740.10 2 435 2.2E-76 T 12-10-2018 PA257_1677 14db849b327a9e00f35bd9bd222e68d0 440 Pfam PF00324 Amino acid permease 13 361 1.9E-38 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_0038 bb663b7ca54b07b36d7e23f8d94183a7 517 Gene3D G3DSA:3.30.750.24 414 508 3.0E-16 T 12-10-2018 IPR036513 STAS domain superfamily PA257_0038 bb663b7ca54b07b36d7e23f8d94183a7 517 Pfam PF13466 STAS domain 451 503 1.4E-7 T 12-10-2018 IPR002645 STAS domain PA257_0038 bb663b7ca54b07b36d7e23f8d94183a7 517 Pfam PF00916 Sulfate permease family 27 385 6.1E-72 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PA257_0038 bb663b7ca54b07b36d7e23f8d94183a7 517 SUPERFAMILY SSF52091 425 503 1.2E-13 T 12-10-2018 IPR036513 STAS domain superfamily PA257_4642 9f5498634ab24c79513ff1a9caefd255 242 SUPERFAMILY SSF56214 123 221 4.36E-13 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PA257_4642 9f5498634ab24c79513ff1a9caefd255 242 PRINTS PR01399 Enterobactin synthetase component D signature 91 109 6.8E-18 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 PA257_4642 9f5498634ab24c79513ff1a9caefd255 242 PRINTS PR01399 Enterobactin synthetase component D signature 169 185 6.8E-18 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 PA257_4642 9f5498634ab24c79513ff1a9caefd255 242 PRINTS PR01399 Enterobactin synthetase component D signature 61 81 6.8E-18 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 PA257_4642 9f5498634ab24c79513ff1a9caefd255 242 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 125 220 2.3E-9 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PA257_0008 4877d0791691fc4e3d5e45650d1148c9 361 SUPERFAMILY SSF55874 211 321 1.14E-6 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_0008 4877d0791691fc4e3d5e45650d1148c9 361 Gene3D G3DSA:3.30.565.10 181 332 1.0E-5 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_1307 a7bae52949bb5910aba923490cf0537e 341 Gene3D G3DSA:3.40.190.10 26 254 9.8E-51 T 12-10-2018 PA257_1307 a7bae52949bb5910aba923490cf0537e 341 SMART SM00062 36 258 3.5E-43 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1307 a7bae52949bb5910aba923490cf0537e 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site PA257_1307 a7bae52949bb5910aba923490cf0537e 341 Gene3D G3DSA:3.40.190.10 128 223 9.8E-51 T 12-10-2018 PA257_1307 a7bae52949bb5910aba923490cf0537e 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 250 5.1E-30 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1307 a7bae52949bb5910aba923490cf0537e 341 SUPERFAMILY SSF53850 27 256 7.76E-46 T 12-10-2018 PA257_4707 4249e2ce64a4a4571be0ef49fa6f5fe0 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 387 2.3E-52 T 12-10-2018 IPR000160 GGDEF domain PA257_4707 4249e2ce64a4a4571be0ef49fa6f5fe0 398 SMART SM00267 215 388 2.8E-66 T 12-10-2018 IPR000160 GGDEF domain PA257_4707 4249e2ce64a4a4571be0ef49fa6f5fe0 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 384 2.8E-46 T 12-10-2018 IPR000160 GGDEF domain PA257_4707 4249e2ce64a4a4571be0ef49fa6f5fe0 398 SUPERFAMILY SSF55073 231 387 1.49E-50 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_4707 4249e2ce64a4a4571be0ef49fa6f5fe0 398 Gene3D G3DSA:3.30.70.270 211 389 1.6E-61 T 12-10-2018 PA257_2171 8d665597faae18164a90f497b59f5fed 417 Gene3D G3DSA:3.40.50.1110 153 400 3.6E-35 T 12-10-2018 IPR036514 SGNH hydrolase superfamily PA257_2171 8d665597faae18164a90f497b59f5fed 417 SUPERFAMILY SSF52266 189 394 2.5E-50 T 12-10-2018 PA257_2171 8d665597faae18164a90f497b59f5fed 417 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 193 388 2.3E-27 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain PA257_4606 4fbcf690082afaae37baf0efa3cd7204 220 Pfam PF01596 O-methyltransferase 22 219 1.3E-62 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 PA257_4606 4fbcf690082afaae37baf0efa3cd7204 220 Gene3D G3DSA:3.40.50.150 1 220 1.0E-75 T 12-10-2018 PA257_4606 4fbcf690082afaae37baf0efa3cd7204 220 SUPERFAMILY SSF53335 8 220 5.19E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3341 1012d462e031c3e18221281c5d220c7d 339 Gene3D G3DSA:3.60.130.10 29 332 1.3E-96 T 12-10-2018 PA257_3341 1012d462e031c3e18221281c5d220c7d 339 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 39 330 1.1E-50 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 PA257_3341 1012d462e031c3e18221281c5d220c7d 339 SUPERFAMILY SSF51197 27 332 1.83E-84 T 12-10-2018 PA257_2893 2ab31b56daa18f55225a9e5cc00dcd0b 360 SUPERFAMILY SSF52151 48 323 1.52E-15 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PA257_0917 021249e0641c4a5e5e258f4ef62110e9 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 PA257_0917 021249e0641c4a5e5e258f4ef62110e9 93 Gene3D G3DSA:3.10.50.40 2 92 1.8E-33 T 12-10-2018 PA257_0917 021249e0641c4a5e5e258f4ef62110e9 93 Pfam PF13616 PPIC-type PPIASE domain 8 91 5.6E-21 T 12-10-2018 PA257_0917 021249e0641c4a5e5e258f4ef62110e9 93 SUPERFAMILY SSF54534 5 92 5.43E-28 T 12-10-2018 PA257_3104 41208463b33df835dd6876f6db7ee5e8 353 Gene3D G3DSA:2.60.120.10 5 352 8.3E-123 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_3104 41208463b33df835dd6876f6db7ee5e8 353 Pfam PF07883 Cupin domain 93 164 1.3E-24 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_3104 41208463b33df835dd6876f6db7ee5e8 353 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 9 348 3.6E-162 T 12-10-2018 IPR011960 Gentisate 1,2-dioxygenase PA257_3104 41208463b33df835dd6876f6db7ee5e8 353 SUPERFAMILY SSF51182 6 346 2.2E-116 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_0726 ba995d2ecf682c50e1c24b0e58bd431b 149 Pfam PF09424 Yqey-like protein 5 147 3.8E-49 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 PA257_0726 ba995d2ecf682c50e1c24b0e58bd431b 149 SUPERFAMILY SSF89095 4 148 1.26E-35 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 PA257_0726 ba995d2ecf682c50e1c24b0e58bd431b 149 Gene3D G3DSA:1.10.1510.10 1 91 1.2E-20 T 12-10-2018 PA257_0726 ba995d2ecf682c50e1c24b0e58bd431b 149 Gene3D G3DSA:1.10.10.410 92 148 1.8E-15 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PA257_5990 d45689c6b582c09144bf3ce7f881ddf8 381 SUPERFAMILY SSF51395 7 374 1.16E-98 T 12-10-2018 PA257_5990 d45689c6b582c09144bf3ce7f881ddf8 381 PIRSF PIRSF000138 2 379 9.4E-122 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 PA257_5990 d45689c6b582c09144bf3ce7f881ddf8 381 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 75.009 T 12-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 PA257_5990 d45689c6b582c09144bf3ce7f881ddf8 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 PA257_5990 d45689c6b582c09144bf3ce7f881ddf8 381 Pfam PF01070 FMN-dependent dehydrogenase 13 375 5.7E-125 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 PA257_5990 d45689c6b582c09144bf3ce7f881ddf8 381 Gene3D G3DSA:3.20.20.70 3 379 2.5E-125 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1277 2c9b6541d88d2dcd24cbefcfd84890c3 424 Pfam PF00999 Sodium/hydrogen exchanger family 8 409 1.6E-74 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PA257_1277 2c9b6541d88d2dcd24cbefcfd84890c3 424 Gene3D G3DSA:1.20.1530.20 2 415 1.5E-15 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 Gene3D G3DSA:3.40.190.10 31 333 2.8E-147 T 12-10-2018 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 Pfam PF13416 Bacterial extracellular solute-binding protein 44 331 8.2E-33 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 SUPERFAMILY SSF53850 28 366 1.7E-105 T 12-10-2018 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 3.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 3.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 3.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 266 285 3.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 198 3.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 3.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 311 337 3.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 3.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 3.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 216 235 3.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 Gene3D G3DSA:3.40.190.10 134 362 2.8E-147 T 12-10-2018 PA257_0366 ec5e8fc96601812bc889c6b5bc9a69d3 367 PIRSF PIRSF019574 1 367 1.4E-143 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 SUPERFAMILY SSF81593 840 979 1.02E-28 T 12-10-2018 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 Gene3D G3DSA:1.20.120.330 305 460 1.5E-52 T 12-10-2018 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 Gene3D G3DSA:1.20.120.1510 473 585 3.1E-33 T 12-10-2018 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 48 296 1.5E-97 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 577 830 2.1E-93 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 Gene3D G3DSA:1.20.120.330 837 980 2.7E-48 T 12-10-2018 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 45 982 19.825 T 12-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 SUPERFAMILY SSF81593 307 456 1.18E-41 T 12-10-2018 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 Gene3D G3DSA:3.30.460.100 586 836 5.4E-87 T 12-10-2018 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 Gene3D G3DSA:3.30.460.100 57 300 3.3E-79 T 12-10-2018 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 Pfam PF08335 GlnD PII-uridylyltransferase 317 456 2.8E-44 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 Pfam PF08335 GlnD PII-uridylyltransferase 852 955 2.8E-12 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 SUPERFAMILY SSF81301 549 840 1.24E-82 T 12-10-2018 PA257_6302 2eeec50995ef2b792f9b17ccc4922414 982 SUPERFAMILY SSF81301 29 306 1.8E-87 T 12-10-2018 PA257_4519 7397b457183d3dfe470753ff806bf97f 351 Gene3D G3DSA:3.40.50.10210 56 329 2.8E-128 T 12-10-2018 PA257_4519 7397b457183d3dfe470753ff806bf97f 351 SUPERFAMILY SSF52733 4 347 9.68E-120 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PA257_4519 7397b457183d3dfe470753ff806bf97f 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 346 4.9E-134 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PA257_4519 7397b457183d3dfe470753ff806bf97f 351 Pfam PF02277 Phosphoribosyltransferase 13 346 4.0E-130 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PA257_4519 7397b457183d3dfe470753ff806bf97f 351 Gene3D G3DSA:1.10.1610.10 24 346 2.8E-128 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PA257_4519 7397b457183d3dfe470753ff806bf97f 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 348 37.069 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PA257_5411 46735f1698144e55e31213c1662afee7 371 Gene3D G3DSA:3.40.710.10 52 359 6.1E-71 T 12-10-2018 PA257_5411 46735f1698144e55e31213c1662afee7 371 SUPERFAMILY SSF56601 11 360 1.04E-77 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_5411 46735f1698144e55e31213c1662afee7 371 Pfam PF00144 Beta-lactamase 58 350 1.4E-44 T 12-10-2018 IPR001466 Beta-lactamase-related PA257_2213 9f8665b62c2783d380c70090ea6327af 295 Gene3D G3DSA:3.40.50.10330 23 287 2.0E-95 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 PA257_2213 9f8665b62c2783d380c70090ea6327af 295 Hamap MF_00361 NAD kinase [nadK]. 5 287 33.952 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 PA257_2213 9f8665b62c2783d380c70090ea6327af 295 Pfam PF01513 ATP-NAD kinase 7 271 3.2E-68 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 PA257_2213 9f8665b62c2783d380c70090ea6327af 295 Gene3D G3DSA:2.60.200.30 127 264 2.0E-95 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 PA257_2213 9f8665b62c2783d380c70090ea6327af 295 SUPERFAMILY SSF111331 6 289 2.62E-89 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PA257_6515 782c3c8db7fd2db7ca3ad68be08b2036 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 177 3.4E-90 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PA257_6515 782c3c8db7fd2db7ca3ad68be08b2036 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 181 1.0E-103 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PA257_6515 782c3c8db7fd2db7ca3ad68be08b2036 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 3.6E-75 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PA257_6515 782c3c8db7fd2db7ca3ad68be08b2036 181 SUPERFAMILY SSF51182 1 178 1.57E-79 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_6515 782c3c8db7fd2db7ca3ad68be08b2036 181 Gene3D G3DSA:2.60.120.10 1 181 5.1E-77 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1468 2d913041ad68c39c3ad925b5bb665de9 249 SUPERFAMILY SSF52266 51 239 4.51E-31 T 12-10-2018 PA257_1468 2d913041ad68c39c3ad925b5bb665de9 249 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 58 229 4.9E-16 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain PA257_1468 2d913041ad68c39c3ad925b5bb665de9 249 Gene3D G3DSA:3.40.50.1110 47 239 1.4E-21 T 12-10-2018 IPR036514 SGNH hydrolase superfamily PA257_6905 9b337c935c99436850cf4fbe40075df9 225 Gene3D G3DSA:1.10.3720.10 14 224 8.7E-45 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6905 9b337c935c99436850cf4fbe40075df9 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 224 5.9E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_6905 9b337c935c99436850cf4fbe40075df9 225 SUPERFAMILY SSF161098 16 212 8.11E-42 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1636 35d7b4a58ab5227c135e23ae9e021dc0 294 Pfam PF04865 Baseplate J-like protein 113 256 2.5E-21 T 12-10-2018 IPR006949 Baseplate protein J-like PA257_1636 35d7b4a58ab5227c135e23ae9e021dc0 294 PIRSF PIRSF020481 1 294 1.7E-108 T 12-10-2018 IPR014507 Baseplate assembly protein J, predicted PA257_6834 c3e008504d65ee6a081b5de255616e1b 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 36 8.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6834 c3e008504d65ee6a081b5de255616e1b 283 SUPERFAMILY SSF46785 1 61 1.36E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6834 c3e008504d65ee6a081b5de255616e1b 283 Pfam PF03466 LysR substrate binding domain 61 265 8.6E-52 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6834 c3e008504d65ee6a081b5de255616e1b 283 Gene3D G3DSA:3.40.190.290 64 271 7.8E-43 T 12-10-2018 PA257_6834 c3e008504d65ee6a081b5de255616e1b 283 SUPERFAMILY SSF53850 63 266 1.96E-45 T 12-10-2018 PA257_6834 c3e008504d65ee6a081b5de255616e1b 283 Gene3D G3DSA:1.10.10.10 1 43 4.5E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0393 252cde817c9a5a3a9077705fbea5bd6d 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 259 2.8E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0393 252cde817c9a5a3a9077705fbea5bd6d 262 SUPERFAMILY SSF161098 6 260 2.22E-57 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0393 252cde817c9a5a3a9077705fbea5bd6d 262 Gene3D G3DSA:1.10.3720.10 13 262 8.5E-56 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5375 ceab342316ee7737469ed2568bba3ae8 253 SUPERFAMILY SSF88713 6 165 3.06E-15 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PA257_5375 ceab342316ee7737469ed2568bba3ae8 253 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 6 159 3.7E-32 T 12-10-2018 IPR018763 Protein of unknown function DUF2334 PA257_5375 ceab342316ee7737469ed2568bba3ae8 253 Gene3D G3DSA:3.20.20.370 26 244 2.9E-15 T 12-10-2018 PA257_4972 6c0b3d15759ffb390b49e3a16df8e946 88 Pfam PF10976 Protein of unknown function (DUF2790) 8 86 2.9E-34 T 12-10-2018 IPR021245 Protein of unknown function DUF2790 PA257_4972 6c0b3d15759ffb390b49e3a16df8e946 88 Gene3D G3DSA:2.30.140.50 20 88 2.7E-31 T 12-10-2018 PA257_1105 746604e592504468c140993653c812b7 265 Pfam PF01497 Periplasmic binding protein 22 218 3.2E-24 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain PA257_1105 746604e592504468c140993653c812b7 265 SUPERFAMILY SSF53807 19 261 8.24E-52 T 12-10-2018 PA257_1105 746604e592504468c140993653c812b7 265 Gene3D G3DSA:3.40.50.1980 19 138 1.7E-29 T 12-10-2018 PA257_1105 746604e592504468c140993653c812b7 265 Gene3D G3DSA:3.40.50.1980 139 262 9.2E-27 T 12-10-2018 PA257_0165 7c2e9ad40d46ceff2981b694e7965cb6 357 SUPERFAMILY SSF52540 121 307 4.07E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0165 7c2e9ad40d46ceff2981b694e7965cb6 357 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 89 316 1.0E-117 T 12-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 PA257_0165 7c2e9ad40d46ceff2981b694e7965cb6 357 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 90 316 1.7E-111 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related PA257_0165 7c2e9ad40d46ceff2981b694e7965cb6 357 Gene3D G3DSA:3.40.50.300 55 337 1.3E-103 T 12-10-2018 PA257_0165 7c2e9ad40d46ceff2981b694e7965cb6 357 PIRSF PIRSF028756 48 346 2.7E-130 T 12-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 PA257_6911 061a84ba26354370d111ef6d5685f608 449 PIRSF PIRSF006060 1 449 9.4E-68 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_6911 061a84ba26354370d111ef6d5685f608 449 Gene3D G3DSA:1.20.1740.10 10 445 2.2E-62 T 12-10-2018 PA257_6911 061a84ba26354370d111ef6d5685f608 449 Pfam PF00324 Amino acid permease 32 407 2.9E-33 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_5564 a1850f55ea833a93d3e8d7c38be761f1 236 Gene3D G3DSA:3.30.110.170 38 226 8.0E-19 T 12-10-2018 PA257_5564 a1850f55ea833a93d3e8d7c38be761f1 236 Pfam PF04402 Protein of unknown function (DUF541) 32 227 1.6E-26 T 12-10-2018 IPR007497 Protein of unknown function DUF541 PA257_5564 a1850f55ea833a93d3e8d7c38be761f1 236 Gene3D G3DSA:3.30.70.2970 43 143 8.0E-19 T 12-10-2018 PA257_3643 c1483610e838479956698034f97749fd 282 Gene3D G3DSA:3.40.50.150 6 227 1.7E-25 T 12-10-2018 PA257_3643 c1483610e838479956698034f97749fd 282 Pfam PF13649 Methyltransferase domain 41 136 1.0E-13 T 12-10-2018 PA257_3643 c1483610e838479956698034f97749fd 282 SUPERFAMILY SSF53335 12 190 5.72E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1594 e6ca6414b0b490c0e928c24fc2e72f04 157 SUPERFAMILY SSF69765 1 155 4.32E-67 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PA257_1594 e6ca6414b0b490c0e928c24fc2e72f04 157 Gene3D G3DSA:3.30.1330.50 1 157 3.4E-72 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PA257_1594 e6ca6414b0b490c0e928c24fc2e72f04 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 1.6E-73 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PA257_1594 e6ca6414b0b490c0e928c24fc2e72f04 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PA257_1594 e6ca6414b0b490c0e928c24fc2e72f04 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 37.065 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PA257_1594 e6ca6414b0b490c0e928c24fc2e72f04 157 Pfam PF02542 YgbB family 1 154 2.5E-68 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PA257_1119 a7bb8974a8556c8be1d4c715258bdd61 238 SMART SM00448 1 119 1.3E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1119 a7bb8974a8556c8be1d4c715258bdd61 238 SMART SM00862 155 231 1.3E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_1119 a7bb8974a8556c8be1d4c715258bdd61 238 SUPERFAMILY SSF52172 1 180 8.09E-32 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1119 a7bb8974a8556c8be1d4c715258bdd61 238 Gene3D G3DSA:1.10.10.10 136 237 2.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1119 a7bb8974a8556c8be1d4c715258bdd61 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 6.3E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_1119 a7bb8974a8556c8be1d4c715258bdd61 238 Pfam PF00072 Response regulator receiver domain 3 119 7.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1119 a7bb8974a8556c8be1d4c715258bdd61 238 Gene3D G3DSA:3.40.50.2300 1 135 6.1E-30 T 12-10-2018 PA257_2352 4a6d79c017d3f1833d0b2ebc16fb9a40 189 Pfam PF06938 Protein of unknown function (DUF1285) 38 182 3.6E-60 T 12-10-2018 IPR010707 Protein of unknown function DUF1285 PA257_2352 4a6d79c017d3f1833d0b2ebc16fb9a40 189 Gene3D G3DSA:2.30.270.10 89 158 9.5E-31 T 12-10-2018 IPR023361 DUF1285, beta-roll domain superfamily PA257_2352 4a6d79c017d3f1833d0b2ebc16fb9a40 189 Gene3D G3DSA:3.10.540.10 2 88 4.1E-35 T 12-10-2018 PA257_2352 4a6d79c017d3f1833d0b2ebc16fb9a40 189 PIRSF PIRSF029557 1 189 1.3E-89 T 12-10-2018 IPR010707 Protein of unknown function DUF1285 PA257_1362 f8af75b3e22b3577beba52ff79ab265c 379 Pfam PF04055 Radical SAM superfamily 112 280 2.2E-15 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_1362 f8af75b3e22b3577beba52ff79ab265c 379 Gene3D G3DSA:3.20.20.70 70 340 4.0E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1362 f8af75b3e22b3577beba52ff79ab265c 379 PIRSF PIRSF006004 4 368 1.6E-152 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 PA257_1362 f8af75b3e22b3577beba52ff79ab265c 379 Gene3D G3DSA:1.10.150.530 8 69 1.6E-26 T 12-10-2018 PA257_1362 f8af75b3e22b3577beba52ff79ab265c 379 SUPERFAMILY SSF102114 108 320 1.11E-13 T 12-10-2018 PA257_1362 f8af75b3e22b3577beba52ff79ab265c 379 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 8 355 73.213 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 PA257_1362 f8af75b3e22b3577beba52ff79ab265c 379 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 359 7.5E-144 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 PA257_1924 65702ca0236538cbcd8e504e8d1e2da9 107 SUPERFAMILY SSF101498 5 104 1.02E-19 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily PA257_1924 65702ca0236538cbcd8e504e8d1e2da9 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 49 102 1.4E-20 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal PA257_1924 65702ca0236538cbcd8e504e8d1e2da9 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 5 104 1.4E-26 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 PA257_2577 546b0eec40787b54ec123ca8b5313954 331 Gene3D G3DSA:3.40.50.1820 1 176 1.1E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2577 546b0eec40787b54ec123ca8b5313954 331 SUPERFAMILY SSF53474 3 175 1.67E-22 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2577 546b0eec40787b54ec123ca8b5313954 331 SUPERFAMILY SSF82784 152 318 1.57E-34 T 12-10-2018 IPR036102 OsmC/Ohr superfamily PA257_2577 546b0eec40787b54ec123ca8b5313954 331 Pfam PF02566 OsmC-like protein 224 316 7.7E-13 T 12-10-2018 IPR003718 OsmC/Ohr family PA257_2577 546b0eec40787b54ec123ca8b5313954 331 Gene3D G3DSA:3.30.300.20 186 324 3.8E-29 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta PA257_1569 2c3230205d6c0ef314e4a7f5f44aa8e3 234 SUPERFAMILY SSF64005 1 216 4.84E-78 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 PA257_1569 2c3230205d6c0ef314e4a7f5f44aa8e3 234 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 221 34.605 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PA257_1569 2c3230205d6c0ef314e4a7f5f44aa8e3 234 Gene3D G3DSA:3.40.1180.10 1 221 7.7E-86 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 PA257_1569 2c3230205d6c0ef314e4a7f5f44aa8e3 234 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 166 183 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 PA257_1569 2c3230205d6c0ef314e4a7f5f44aa8e3 234 Pfam PF01255 Putative undecaprenyl diphosphate synthase 1 220 3.3E-77 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PA257_1569 2c3230205d6c0ef314e4a7f5f44aa8e3 234 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 220 5.4E-85 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PA257_0137 f5c9f15e6896c9d4b9ed553ac4c76c17 211 Gene3D G3DSA:3.40.30.10 42 209 3.3E-51 T 12-10-2018 PA257_0137 f5c9f15e6896c9d4b9ed553ac4c76c17 211 Pfam PF02630 SCO1/SenC 48 185 3.2E-37 T 12-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0137 f5c9f15e6896c9d4b9ed553ac4c76c17 211 SUPERFAMILY SSF52833 50 207 2.43E-49 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_6930 b3f2208276fb8cd025f40b553fa5303d 285 SUPERFAMILY SSF54427 159 283 1.58E-5 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_6930 b3f2208276fb8cd025f40b553fa5303d 285 Pfam PF04280 Tim44-like domain 162 283 4.8E-8 T 12-10-2018 IPR007379 Tim44-like domain PA257_6930 b3f2208276fb8cd025f40b553fa5303d 285 SMART SM00978 153 284 2.0E-19 T 12-10-2018 IPR007379 Tim44-like domain PA257_4337 e4c78227121c01464a9c7be2d9dee10d 128 Gene3D G3DSA:3.40.50.2300 1 126 1.9E-39 T 12-10-2018 PA257_4337 e4c78227121c01464a9c7be2d9dee10d 128 Pfam PF00072 Response regulator receiver domain 7 120 3.6E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4337 e4c78227121c01464a9c7be2d9dee10d 128 SUPERFAMILY SSF52172 3 125 1.27E-37 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4337 e4c78227121c01464a9c7be2d9dee10d 128 SMART SM00448 5 119 4.9E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6740 e96ab0c7d565ec651f19659a98f9353f 133 Gene3D G3DSA:3.30.450.150 1 133 4.0E-38 T 12-10-2018 IPR038084 GlcG-like domain superfamily PA257_6740 e96ab0c7d565ec651f19659a98f9353f 133 Pfam PF03928 Haem-degrading 10 129 4.8E-30 T 12-10-2018 IPR005624 Haem-degrading PA257_6740 e96ab0c7d565ec651f19659a98f9353f 133 SUPERFAMILY SSF143744 2 131 1.18E-34 T 12-10-2018 IPR038084 GlcG-like domain superfamily PA257_2517 20fd50162e6e910964caf10f3d131f5b 146 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 142 1.3E-51 T 12-10-2018 IPR022262 Lipoprotein, putative PA257_3276 82ab2dd21f200e1248d36a36c2dd5558 494 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 489 2.0E-192 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PA257_3276 82ab2dd21f200e1248d36a36c2dd5558 494 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 489 1.4E-214 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PA257_6235 f29a525602ef934df8224db1785a24d0 339 SUPERFAMILY SSF52540 113 334 3.1E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6235 f29a525602ef934df8224db1785a24d0 339 Gene3D G3DSA:1.10.40.50 275 339 1.8E-21 T 12-10-2018 PA257_6235 f29a525602ef934df8224db1785a24d0 339 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 78 330 1.3E-75 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 PA257_6235 f29a525602ef934df8224db1785a24d0 339 Gene3D G3DSA:2.40.50.140 40 99 2.2E-22 T 12-10-2018 PA257_6235 f29a525602ef934df8224db1785a24d0 339 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 45 338 35.983 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 PA257_6235 f29a525602ef934df8224db1785a24d0 339 Gene3D G3DSA:3.40.50.300 102 273 8.3E-51 T 12-10-2018 PA257_6235 f29a525602ef934df8224db1785a24d0 339 Pfam PF03193 RsgA GTPase 100 273 1.5E-52 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 PA257_6235 f29a525602ef934df8224db1785a24d0 339 SUPERFAMILY SSF50249 45 103 6.17E-5 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2962 55d3fc2f2a593859801308263afd4154 318 SUPERFAMILY SSF53850 24 243 3.07E-43 T 12-10-2018 PA257_2962 55d3fc2f2a593859801308263afd4154 318 Gene3D G3DSA:3.40.190.10 26 296 2.3E-84 T 12-10-2018 PA257_2962 55d3fc2f2a593859801308263afd4154 318 Gene3D G3DSA:3.40.190.10 101 200 2.3E-84 T 12-10-2018 PA257_2962 55d3fc2f2a593859801308263afd4154 318 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 27 305 2.7E-58 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 PA257_2962 55d3fc2f2a593859801308263afd4154 318 SMART SM00062 25 239 2.2E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2962 55d3fc2f2a593859801308263afd4154 318 Pfam PF09084 NMT1/THI5 like 65 188 7.4E-11 T 12-10-2018 IPR015168 SsuA/THI5-like PA257_2962 55d3fc2f2a593859801308263afd4154 318 Gene3D G3DSA:1.10.8.450 234 266 2.3E-84 T 12-10-2018 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 SMART SM00482 671 877 5.0E-118 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 SUPERFAMILY SSF47807 168 288 1.14E-28 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily PA257_6894 fa12fb933e681da874644a308ddfbccf 913 SUPERFAMILY SSF53098 311 501 2.01E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_6894 fa12fb933e681da874644a308ddfbccf 913 Pfam PF00476 DNA polymerase family A 539 911 8.9E-153 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 TIGRFAM TIGR00593 pola: DNA polymerase I 6 913 5.0E-282 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 Gene3D G3DSA:1.10.150.20 171 251 4.6E-91 T 12-10-2018 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 SMART SM00279 170 205 6.1E-12 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 SUPERFAMILY SSF56672 506 913 4.56E-160 T 12-10-2018 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 Gene3D G3DSA:3.40.50.1010 6 282 4.6E-91 T 12-10-2018 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 Gene3D G3DSA:3.30.70.370 649 909 2.2E-113 T 12-10-2018 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 SMART SM00475 4 266 2.6E-114 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 Gene3D G3DSA:3.30.420.10 309 526 2.9E-70 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 Gene3D G3DSA:1.20.1060.10 527 643 2.8E-38 T 12-10-2018 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 Gene3D G3DSA:1.10.150.20 694 837 2.2E-113 T 12-10-2018 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 ProSitePatterns PS00447 DNA polymerase family A signature. 739 758 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 269 6.3E-27 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 776 787 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 860 873 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 663 678 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 739 764 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 830 846 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 798 809 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 640 662 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 685 708 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 715 728 1.0E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 Pfam PF01612 3'-5' exonuclease 313 501 1.4E-39 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 9.1E-51 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 SMART SM00474 312 501 4.1E-37 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PA257_6894 fa12fb933e681da874644a308ddfbccf 913 SUPERFAMILY SSF88723 5 167 2.44E-52 T 12-10-2018 IPR029060 PIN-like domain superfamily PA257_0155 8fbb2f001743a744f0352d01d2e4b3fd 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0155 8fbb2f001743a744f0352d01d2e4b3fd 448 PIRSF PIRSF000521 197 447 9.2E-14 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0155 8fbb2f001743a744f0352d01d2e4b3fd 448 PIRSF PIRSF000521 37 147 0.3 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0155 8fbb2f001743a744f0352d01d2e4b3fd 448 Gene3D G3DSA:3.90.1150.10 33 440 9.0E-157 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_0155 8fbb2f001743a744f0352d01d2e4b3fd 448 Pfam PF00202 Aminotransferase class-III 34 443 4.4E-78 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0155 8fbb2f001743a744f0352d01d2e4b3fd 448 SUPERFAMILY SSF53383 28 445 9.88E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_0155 8fbb2f001743a744f0352d01d2e4b3fd 448 Gene3D G3DSA:3.40.640.10 69 351 9.0E-157 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_1480 1567e64987c5f48b245b414892bd6f25 611 SUPERFAMILY SSF51735 403 491 1.38E-7 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1480 1567e64987c5f48b245b414892bd6f25 611 Gene3D G3DSA:3.40.50.720 401 506 2.2E-9 T 12-10-2018 PA257_1480 1567e64987c5f48b245b414892bd6f25 611 Pfam PF02254 TrkA-N domain 403 493 1.5E-5 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PA257_1480 1567e64987c5f48b245b414892bd6f25 611 Gene3D G3DSA:1.20.1530.20 3 397 1.0E-13 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_1480 1567e64987c5f48b245b414892bd6f25 611 Pfam PF00999 Sodium/hydrogen exchanger family 14 390 1.4E-36 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PA257_2635 bf7515230a7ae6fda11d608197825e0d 150 PIRSF PIRSF002070 1 149 1.5E-22 T 12-10-2018 PA257_2635 bf7515230a7ae6fda11d608197825e0d 150 Gene3D G3DSA:2.40.50.140 3 149 1.1E-21 T 12-10-2018 PA257_2635 bf7515230a7ae6fda11d608197825e0d 150 Pfam PF00436 Single-strand binding protein family 9 109 1.2E-11 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 PA257_2635 bf7515230a7ae6fda11d608197825e0d 150 SUPERFAMILY SSF50249 3 136 1.37E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_6450 e56e9aaa10da93be751989f5357be21c 250 Gene3D G3DSA:3.40.190.10 112 207 1.1E-70 T 12-10-2018 PA257_6450 e56e9aaa10da93be751989f5357be21c 250 SMART SM00062 26 248 8.0E-64 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6450 e56e9aaa10da93be751989f5357be21c 250 Gene3D G3DSA:3.40.190.10 28 244 1.1E-70 T 12-10-2018 PA257_6450 e56e9aaa10da93be751989f5357be21c 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 1.1E-65 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6450 e56e9aaa10da93be751989f5357be21c 250 SUPERFAMILY SSF53850 5 249 2.1E-73 T 12-10-2018 PA257_6450 e56e9aaa10da93be751989f5357be21c 250 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site PA257_2824 34aecabeb0665315ea7ff0ace26c671b 159 Gene3D G3DSA:3.10.180.70 1 159 1.9E-64 T 12-10-2018 PA257_2824 34aecabeb0665315ea7ff0ace26c671b 159 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 119 1.6E-46 T 12-10-2018 IPR028973 PhnB-like PA257_2824 34aecabeb0665315ea7ff0ace26c671b 159 SUPERFAMILY SSF54593 4 157 1.45E-48 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_2824 34aecabeb0665315ea7ff0ace26c671b 159 PIRSF PIRSF021700 1 159 1.6E-68 T 12-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase PA257_0316 f6f210fe22a75f4f8df7d5d4464603e9 78 Pfam PF05052 MerE protein 1 74 3.2E-48 T 12-10-2018 IPR007746 Broad mercury transporter MerE GO:0015097|GO:0015694|GO:0016020 PA257_0316 f6f210fe22a75f4f8df7d5d4464603e9 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 2.0E-27 T 12-10-2018 IPR007746 Broad mercury transporter MerE GO:0015097|GO:0015694|GO:0016020 PA257_6632 d0cc80400599e90b2cc02f6a2e2b9ff6 46 PIRSF PIRSF037657 1 46 1.5E-25 T 12-10-2018 IPR017254 Lipoprotein, LppL PA257_6632 d0cc80400599e90b2cc02f6a2e2b9ff6 46 Pfam PF13627 Prokaryotic lipoprotein-attachment site 9 30 4.9E-8 T 12-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site PA257_0355 20598497a037d46bddbfcf3a70fd219c 316 Gene3D G3DSA:3.40.190.290 99 305 1.5E-14 T 12-10-2018 PA257_0355 20598497a037d46bddbfcf3a70fd219c 316 Pfam PF03466 LysR substrate binding domain 95 297 5.0E-27 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0355 20598497a037d46bddbfcf3a70fd219c 316 Gene3D G3DSA:1.10.10.10 8 96 7.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0355 20598497a037d46bddbfcf3a70fd219c 316 SUPERFAMILY SSF46785 8 93 1.46E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0355 20598497a037d46bddbfcf3a70fd219c 316 SUPERFAMILY SSF53850 100 302 2.53E-25 T 12-10-2018 PA257_0355 20598497a037d46bddbfcf3a70fd219c 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 3.7E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2376 2363ca3d6522ce8d9f3c4009ad874293 392 Pfam PF07690 Major Facilitator Superfamily 9 340 4.3E-33 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_2376 2363ca3d6522ce8d9f3c4009ad874293 392 Gene3D G3DSA:1.20.1250.20 4 375 2.0E-40 T 12-10-2018 PA257_2376 2363ca3d6522ce8d9f3c4009ad874293 392 SUPERFAMILY SSF103473 4 379 7.32E-53 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3932 00fb90c616d608777dec85f5d39d99b2 301 SUPERFAMILY SSF46785 3 86 1.33E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3932 00fb90c616d608777dec85f5d39d99b2 301 Gene3D G3DSA:3.40.190.10 93 286 1.7E-60 T 12-10-2018 PA257_3932 00fb90c616d608777dec85f5d39d99b2 301 Pfam PF03466 LysR substrate binding domain 88 292 6.0E-42 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3932 00fb90c616d608777dec85f5d39d99b2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3932 00fb90c616d608777dec85f5d39d99b2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3932 00fb90c616d608777dec85f5d39d99b2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3932 00fb90c616d608777dec85f5d39d99b2 301 SUPERFAMILY SSF53850 90 295 1.76E-38 T 12-10-2018 PA257_3932 00fb90c616d608777dec85f5d39d99b2 301 Gene3D G3DSA:1.10.10.10 1 86 3.8E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3932 00fb90c616d608777dec85f5d39d99b2 301 Gene3D G3DSA:3.40.190.10 164 268 1.7E-60 T 12-10-2018 PA257_3932 00fb90c616d608777dec85f5d39d99b2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.7E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0230 d5f7655ec3c83af5fcc134e36f8cafe1 70 Pfam PF11278 Protein of unknown function (DUF3079) 1 49 8.2E-34 T 12-10-2018 IPR021430 Protein of unknown function DUF3079 PA257_3237 d9be006cd6544cfca828460fe8d8d63e 403 Pfam PF03929 PepSY-associated TM region 12 366 2.9E-60 T 12-10-2018 IPR005625 PepSY-associated TM protein PA257_3646 6ddf65010a25ba967ecbadeea5b9a0bc 169 Gene3D G3DSA:3.10.450.50 2 169 1.6E-42 T 12-10-2018 PA257_3646 6ddf65010a25ba967ecbadeea5b9a0bc 169 SUPERFAMILY SSF54427 7 160 2.16E-36 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_3646 6ddf65010a25ba967ecbadeea5b9a0bc 169 Pfam PF00866 Ring hydroxylating beta subunit 23 160 1.3E-38 T 12-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 PA257_3716 e7dec10f99b386d1301bf8424f165fb3 74 SUPERFAMILY SSF141447 1 74 1.83E-30 T 12-10-2018 IPR038079 PA2021-like domain superfamily PA257_3716 e7dec10f99b386d1301bf8424f165fb3 74 Gene3D G3DSA:2.30.270.30 1 74 2.2E-35 T 12-10-2018 IPR038079 PA2021-like domain superfamily PA257_3716 e7dec10f99b386d1301bf8424f165fb3 74 Pfam PF11462 Protein of unknown function (DUF3203) 1 74 8.6E-35 T 12-10-2018 IPR021564 Protein of unknown function DUF3203 PA257_2933 369e4e9b07834af497b8a61b3a4a6c1a 90 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site PA257_2933 369e4e9b07834af497b8a61b3a4a6c1a 90 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.6E-27 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_2933 369e4e9b07834af497b8a61b3a4a6c1a 90 SUPERFAMILY SSF50249 1 65 2.4E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_2933 369e4e9b07834af497b8a61b3a4a6c1a 90 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 67 6.5E-38 T 12-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 PA257_2933 369e4e9b07834af497b8a61b3a4a6c1a 90 SMART SM00357 3 67 3.9E-23 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 PA257_2933 369e4e9b07834af497b8a61b3a4a6c1a 90 PRINTS PR00050 Cold shock protein signature 25 34 1.6E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_2933 369e4e9b07834af497b8a61b3a4a6c1a 90 PRINTS PR00050 Cold shock protein signature 4 19 1.6E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_2933 369e4e9b07834af497b8a61b3a4a6c1a 90 PRINTS PR00050 Cold shock protein signature 40 58 1.6E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_2933 369e4e9b07834af497b8a61b3a4a6c1a 90 Gene3D G3DSA:2.40.50.140 1 65 5.9E-25 T 12-10-2018 PA257_2933 369e4e9b07834af497b8a61b3a4a6c1a 90 PIRSF PIRSF002599 1 84 1.9E-22 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 PA257_4665 5794a70a7c6fbafc5a28b45e7ce3f03d 444 PIRSF PIRSF002808 5 435 8.5E-80 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 PA257_4665 5794a70a7c6fbafc5a28b45e7ce3f03d 444 Pfam PF07690 Major Facilitator Superfamily 27 387 3.8E-42 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4665 5794a70a7c6fbafc5a28b45e7ce3f03d 444 SUPERFAMILY SSF103473 14 422 2.22E-57 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4665 5794a70a7c6fbafc5a28b45e7ce3f03d 444 Gene3D G3DSA:1.20.1250.20 230 423 1.9E-28 T 12-10-2018 PA257_4665 5794a70a7c6fbafc5a28b45e7ce3f03d 444 Gene3D G3DSA:1.20.1250.20 12 216 3.4E-42 T 12-10-2018 PA257_6752 8e45ca884d6d797964edce40de3682a4 300 SMART SM00448 4 119 9.1E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6752 8e45ca884d6d797964edce40de3682a4 300 Pfam PF00072 Response regulator receiver domain 7 120 5.0E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6752 8e45ca884d6d797964edce40de3682a4 300 Gene3D G3DSA:3.40.50.12740 4 189 5.0E-38 T 12-10-2018 PA257_6752 8e45ca884d6d797964edce40de3682a4 300 SUPERFAMILY SSF52172 1 132 6.26E-37 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6657 9b8b6f31f819295e5f17dcee0986593b 275 SUPERFAMILY SSF53098 101 263 1.9E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_6657 9b8b6f31f819295e5f17dcee0986593b 275 Pfam PF00665 Integrase core domain 108 223 3.2E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_6657 9b8b6f31f819295e5f17dcee0986593b 275 Pfam PF13276 HTH-like domain 31 83 1.8E-13 T 12-10-2018 IPR025948 HTH-like domain PA257_6657 9b8b6f31f819295e5f17dcee0986593b 275 Gene3D G3DSA:3.30.420.10 99 249 3.8E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_1668 44860e4925e4e6c71a1a0f649f006bc4 238 SMART SM01144 26 219 1.1E-72 T 12-10-2018 IPR005636 DTW PA257_1668 44860e4925e4e6c71a1a0f649f006bc4 238 Pfam PF03942 DTW domain 29 214 2.1E-42 T 12-10-2018 IPR005636 DTW PA257_2045 76f5f09aed02de3068fb05a54fd47f1c 271 Gene3D G3DSA:3.40.50.300 1 259 2.7E-71 T 12-10-2018 PA257_2045 76f5f09aed02de3068fb05a54fd47f1c 271 SUPERFAMILY SSF52540 2 268 6.11E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2045 76f5f09aed02de3068fb05a54fd47f1c 271 PIRSF PIRSF003092 1 271 1.3E-91 T 12-10-2018 IPR025501 ATP binding protein MinD PA257_2045 76f5f09aed02de3068fb05a54fd47f1c 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 1.3E-115 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 PA257_2045 76f5f09aed02de3068fb05a54fd47f1c 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 8.2E-20 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PA257_2768 5dc8f66a8f27d00ff8d06bc81838e06f 293 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 282 2.1E-71 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 PA257_2768 5dc8f66a8f27d00ff8d06bc81838e06f 293 Pfam PF04261 Dyp-type peroxidase family 35 281 6.9E-35 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 PA257_2768 5dc8f66a8f27d00ff8d06bc81838e06f 293 SUPERFAMILY SSF54909 1 284 1.97E-74 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_4979 6f6d2e2a17d5df651f81c5fa8b6e598f 137 Pfam PF00472 RF-1 domain 8 132 4.4E-26 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PA257_4979 6f6d2e2a17d5df651f81c5fa8b6e598f 137 Gene3D G3DSA:3.30.160.20 1 136 1.4E-40 T 12-10-2018 PA257_4979 6f6d2e2a17d5df651f81c5fa8b6e598f 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PA257_4979 6f6d2e2a17d5df651f81c5fa8b6e598f 137 SUPERFAMILY SSF75620 8 117 6.28E-13 T 12-10-2018 PA257_3273 5bcbb44870c55119d0fba76d51a71d2b 597 Pfam PF05947 Type VI secretion system, TssF 10 593 1.7E-184 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like PA257_3273 5bcbb44870c55119d0fba76d51a71d2b 597 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 9 593 2.7E-183 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like PA257_3273 5bcbb44870c55119d0fba76d51a71d2b 597 PIRSF PIRSF028304 5 596 4.2E-187 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like PA257_2449 47944d01f8053c6e496f63bc1403ab58 311 Gene3D G3DSA:3.40.50.1820 27 311 4.2E-95 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2449 47944d01f8053c6e496f63bc1403ab58 311 Pfam PF00561 alpha/beta hydrolase fold 35 280 7.4E-26 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2449 47944d01f8053c6e496f63bc1403ab58 311 SUPERFAMILY SSF53474 29 307 2.54E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6177 e1ab8dca095c611129e6a6cbbbe5791c 489 SUPERFAMILY SSF53720 15 483 3.93E-147 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_6177 e1ab8dca095c611129e6a6cbbbe5791c 489 Pfam PF00171 Aldehyde dehydrogenase family 18 475 1.8E-150 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_6177 e1ab8dca095c611129e6a6cbbbe5791c 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_6177 e1ab8dca095c611129e6a6cbbbe5791c 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_6177 e1ab8dca095c611129e6a6cbbbe5791c 489 Gene3D G3DSA:3.40.309.10 260 447 1.5E-150 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_6177 e1ab8dca095c611129e6a6cbbbe5791c 489 Gene3D G3DSA:3.40.605.10 27 467 1.5E-150 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_3091 a9af6b8f420c81547ede31607977f710 217 Gene3D G3DSA:1.10.760.10 22 107 2.4E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3091 a9af6b8f420c81547ede31607977f710 217 SUPERFAMILY SSF46626 21 103 2.22E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3091 a9af6b8f420c81547ede31607977f710 217 Gene3D G3DSA:1.10.760.10 120 210 3.7E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3091 a9af6b8f420c81547ede31607977f710 217 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 28 102 3.4E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3091 a9af6b8f420c81547ede31607977f710 217 Pfam PF00034 Cytochrome c 141 210 9.9E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3091 a9af6b8f420c81547ede31607977f710 217 PIRSF PIRSF000005 1 212 1.8E-65 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 PA257_3091 a9af6b8f420c81547ede31607977f710 217 SUPERFAMILY SSF46626 125 210 8.08E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4962 61d517cb04fc31700c31a4db976fe97f 275 SUPERFAMILY SSF51621 4 227 7.68E-58 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_4962 61d517cb04fc31700c31a4db976fe97f 275 Gene3D G3DSA:3.20.20.60 1 275 9.3E-79 T 12-10-2018 PA257_4962 61d517cb04fc31700c31a4db976fe97f 275 PIRSF PIRSF015582 1 275 2.6E-72 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like PA257_4962 61d517cb04fc31700c31a4db976fe97f 275 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 215 1.0E-28 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PA257_2356 3536b627110c00a26d72cebc04b77b8f 398 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.5E-37 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_2356 3536b627110c00a26d72cebc04b77b8f 398 Gene3D G3DSA:3.40.50.720 1 398 1.1E-181 T 12-10-2018 PA257_2356 3536b627110c00a26d72cebc04b77b8f 398 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.9E-107 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_2356 3536b627110c00a26d72cebc04b77b8f 398 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 2.4E-29 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_2356 3536b627110c00a26d72cebc04b77b8f 398 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 54.776 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_0801 448385541eb21eaba5aaf4f6d0819ad3 363 SUPERFAMILY SSF53067 3 313 1.29E-24 T 12-10-2018 PA257_0801 448385541eb21eaba5aaf4f6d0819ad3 363 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 3 363 7.4E-168 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 PA257_0801 448385541eb21eaba5aaf4f6d0819ad3 363 Gene3D G3DSA:3.30.420.40 5 354 2.7E-133 T 12-10-2018 PA257_0801 448385541eb21eaba5aaf4f6d0819ad3 363 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 363 40.789 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 PA257_0801 448385541eb21eaba5aaf4f6d0819ad3 363 Gene3D G3DSA:3.30.420.40 140 323 2.7E-133 T 12-10-2018 PA257_5332 f6c51776cd4fec67a2855f4b573cfade 183 SUPERFAMILY SSF52540 26 139 9.14E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5332 f6c51776cd4fec67a2855f4b573cfade 183 Gene3D G3DSA:3.40.50.300 25 138 5.2E-36 T 12-10-2018 PA257_5332 f6c51776cd4fec67a2855f4b573cfade 183 PIRSF PIRSF037290 2 181 1.1E-72 T 12-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 PA257_2855 c7c42cb616dc187ca2c53f6a27c1ef84 367 Pfam PF07759 Protein of unknown function (DUF1615) 49 363 6.4E-147 T 12-10-2018 IPR011673 Protein of unknown function DUF1615 PA257_2855 c7c42cb616dc187ca2c53f6a27c1ef84 367 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 14 363 0.0 T 12-10-2018 IPR011673 Protein of unknown function DUF1615 PA257_2413 3c206f778e0dccbe6a3bb60e66eb0233 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 3.3E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_2413 3c206f778e0dccbe6a3bb60e66eb0233 479 Gene3D G3DSA:3.40.640.10 144 362 6.4E-99 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_2413 3c206f778e0dccbe6a3bb60e66eb0233 479 Gene3D G3DSA:3.90.1150.10 97 465 6.4E-99 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_2413 3c206f778e0dccbe6a3bb60e66eb0233 479 SUPERFAMILY SSF53383 94 465 1.53E-89 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_2413 3c206f778e0dccbe6a3bb60e66eb0233 479 Pfam PF00155 Aminotransferase class I and II 137 450 1.7E-28 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_2413 3c206f778e0dccbe6a3bb60e66eb0233 479 Gene3D G3DSA:1.10.10.10 3 71 4.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2413 3c206f778e0dccbe6a3bb60e66eb0233 479 SMART SM00345 10 69 4.6E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_2413 3c206f778e0dccbe6a3bb60e66eb0233 479 SUPERFAMILY SSF46785 4 73 1.16E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6906 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 Gene3D G3DSA:3.40.190.10 27 258 1.9E-107 T 12-10-2018 PA257_6906 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 PIRSF PIRSF002854 1 260 4.3E-107 T 12-10-2018 IPR004872 Lipoprotein NlpA family PA257_6906 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 45 259 5.1E-70 T 12-10-2018 IPR004872 Lipoprotein NlpA family PA257_6906 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 Pfam PF03180 NLPA lipoprotein 25 260 9.8E-103 T 12-10-2018 IPR004872 Lipoprotein NlpA family PA257_6906 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 Gene3D G3DSA:3.40.190.10 106 210 1.9E-107 T 12-10-2018 PA257_6906 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 SUPERFAMILY SSF53850 25 260 2.17E-86 T 12-10-2018 PA257_5479 92b5cc879719fe3f8da63ec20b64e307 357 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 339 9.9E-36 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 PA257_5479 92b5cc879719fe3f8da63ec20b64e307 357 Gene3D G3DSA:3.40.50.2000 6 345 1.2E-130 T 12-10-2018 PA257_5479 92b5cc879719fe3f8da63ec20b64e307 357 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 141 3.6E-40 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5479 92b5cc879719fe3f8da63ec20b64e307 357 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 350 3.6E-110 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5479 92b5cc879719fe3f8da63ec20b64e307 357 SUPERFAMILY SSF53756 4 355 1.06E-115 T 12-10-2018 PA257_5479 92b5cc879719fe3f8da63ec20b64e307 357 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 355 36.737 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5479 92b5cc879719fe3f8da63ec20b64e307 357 Gene3D G3DSA:3.40.50.2000 162 339 1.2E-130 T 12-10-2018 PA257_2308 a6ad112fb16b83ef9937f49345302b92 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 201 8.9E-108 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PA257_2308 a6ad112fb16b83ef9937f49345302b92 202 PIRSF PIRSF006102 1 202 6.3E-59 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 PA257_2308 a6ad112fb16b83ef9937f49345302b92 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 3.4E-56 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 PA257_2308 a6ad112fb16b83ef9937f49345302b92 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 29.042 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PA257_6476 e8e5df86b6950f15ab69963ba600b09c 114 Gene3D G3DSA:3.10.450.40 2 113 2.1E-26 T 12-10-2018 PA257_6476 e8e5df86b6950f15ab69963ba600b09c 114 Pfam PF04965 Gene 25-like lysozyme 13 99 1.3E-18 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD PA257_6476 e8e5df86b6950f15ab69963ba600b09c 114 SUPERFAMILY SSF160719 6 111 6.93E-33 T 12-10-2018 PA257_5212 27a1097621f01c3b908dc25415c20788 201 Pfam PF01464 Transglycosylase SLT domain 41 162 3.2E-7 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 PA257_5212 27a1097621f01c3b908dc25415c20788 201 Gene3D G3DSA:1.10.530.10 36 198 5.4E-10 T 12-10-2018 PA257_5212 27a1097621f01c3b908dc25415c20788 201 SUPERFAMILY SSF53955 38 182 2.68E-16 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_0319 289ad9eb39298aaf4d7a7d604e565853 988 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 1.3E-52 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 PA257_0319 289ad9eb39298aaf4d7a7d604e565853 988 Pfam PF01526 Tn3 transposase DDE domain 580 966 2.4E-154 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 PA257_3183 668246e173fcdf56fbeb855b40c642cb 127 Pfam PF01597 Glycine cleavage H-protein 4 122 3.7E-37 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate PA257_3183 668246e173fcdf56fbeb855b40c642cb 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 122 38.365 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PA257_3183 668246e173fcdf56fbeb855b40c642cb 127 Gene3D G3DSA:2.40.50.100 1 124 1.3E-40 T 12-10-2018 PA257_3183 668246e173fcdf56fbeb855b40c642cb 127 SUPERFAMILY SSF51230 2 122 8.11E-36 T 12-10-2018 IPR011053 Single hybrid motif PA257_3183 668246e173fcdf56fbeb855b40c642cb 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 123 8.5E-42 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PA257_5932 4bdf48716dbf23b347b6be4f7d95030e 431 PIRSF PIRSF005353 1 431 2.0E-180 T 12-10-2018 IPR026033 Purine permease PbuG-like PA257_5932 4bdf48716dbf23b347b6be4f7d95030e 431 Pfam PF00860 Permease family 17 391 5.3E-54 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PA257_1156 1b70f9ba5b30266d5b24540a1af2b04c 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 28 194 1.4E-62 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PA257_1156 1b70f9ba5b30266d5b24540a1af2b04c 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 1.0E-12 T 12-10-2018 PA257_1156 1b70f9ba5b30266d5b24540a1af2b04c 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 12-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PA257_1156 1b70f9ba5b30266d5b24540a1af2b04c 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 158 3.6E-5 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PA257_1156 1b70f9ba5b30266d5b24540a1af2b04c 217 PIRSF PIRSF016262 4 215 2.1E-57 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PA257_1156 1b70f9ba5b30266d5b24540a1af2b04c 217 Gene3D G3DSA:3.30.930.10 2 203 3.0E-60 T 12-10-2018 PA257_1156 1b70f9ba5b30266d5b24540a1af2b04c 217 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 37.338 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PA257_1156 1b70f9ba5b30266d5b24540a1af2b04c 217 SUPERFAMILY SSF55681 6 204 2.57E-66 T 12-10-2018 PA257_4559 6f6fa15fe03627599bd2c968fe0bf0b9 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 56 1.2E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4559 6f6fa15fe03627599bd2c968fe0bf0b9 186 SUPERFAMILY SSF46689 5 72 2.26E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4559 6f6fa15fe03627599bd2c968fe0bf0b9 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.2E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4559 6f6fa15fe03627599bd2c968fe0bf0b9 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.2E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4559 6f6fa15fe03627599bd2c968fe0bf0b9 186 SUPERFAMILY SSF48498 79 184 8.9E-14 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_4559 6f6fa15fe03627599bd2c968fe0bf0b9 186 Gene3D G3DSA:1.10.357.10 4 184 1.9E-38 T 12-10-2018 PA257_0413 544b31da8f8934caec79cee9e0f2600f 266 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 254 1.8E-84 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PA257_0413 544b31da8f8934caec79cee9e0f2600f 266 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PA257_0413 544b31da8f8934caec79cee9e0f2600f 266 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 260 3.7E-86 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PA257_0413 544b31da8f8934caec79cee9e0f2600f 266 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 259 20.041 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PA257_6270 3d9824a0a2a714341260b8ddcace5365 245 SMART SM00448 6 121 4.7E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6270 3d9824a0a2a714341260b8ddcace5365 245 SMART SM00862 163 238 2.1E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_6270 3d9824a0a2a714341260b8ddcace5365 245 SUPERFAMILY SSF46894 139 239 3.4E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_6270 3d9824a0a2a714341260b8ddcace5365 245 Pfam PF00072 Response regulator receiver domain 8 121 4.9E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_6270 3d9824a0a2a714341260b8ddcace5365 245 Gene3D G3DSA:1.10.10.10 139 244 7.1E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6270 3d9824a0a2a714341260b8ddcace5365 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 238 6.9E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_6270 3d9824a0a2a714341260b8ddcace5365 245 SUPERFAMILY SSF52172 5 133 1.08E-36 T 12-10-2018 IPR011006 CheY-like superfamily PA257_6270 3d9824a0a2a714341260b8ddcace5365 245 Gene3D G3DSA:3.40.50.2300 3 138 3.5E-34 T 12-10-2018 PA257_6591 f923151f865cce10b43ba761bcbeb9a8 662 Pfam PF01757 Acyltransferase family 8 326 4.3E-30 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 PA257_6591 f923151f865cce10b43ba761bcbeb9a8 662 SUPERFAMILY SSF52266 425 650 5.95E-5 T 12-10-2018 PA257_2871 e83965b5e38f28e0ad9ce0dc61ddcc3e 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 8.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2871 e83965b5e38f28e0ad9ce0dc61ddcc3e 309 SUPERFAMILY SSF46785 12 117 8.17E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2871 e83965b5e38f28e0ad9ce0dc61ddcc3e 309 Gene3D G3DSA:1.10.10.10 8 92 3.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2871 e83965b5e38f28e0ad9ce0dc61ddcc3e 309 Gene3D G3DSA:3.40.190.10 168 269 5.6E-67 T 12-10-2018 PA257_2871 e83965b5e38f28e0ad9ce0dc61ddcc3e 309 Gene3D G3DSA:3.40.190.10 96 294 5.6E-67 T 12-10-2018 PA257_2871 e83965b5e38f28e0ad9ce0dc61ddcc3e 309 Pfam PF03466 LysR substrate binding domain 93 298 1.5E-46 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2871 e83965b5e38f28e0ad9ce0dc61ddcc3e 309 SUPERFAMILY SSF53850 94 300 4.16E-46 T 12-10-2018 PA257_0628 c7d8028b9b33748e39eea3b4f4efe6e8 106 PIRSF PIRSF034456 1 106 4.9E-54 T 12-10-2018 IPR017028 Uncharacterised conserved protein UCP034456 PA257_2897 72082ab5bc384efc37dd0835de12ec47 445 SUPERFAMILY SSF47384 212 280 4.71E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_2897 72082ab5bc384efc37dd0835de12ec47 445 SMART SM00387 332 438 1.2E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_2897 72082ab5bc384efc37dd0835de12ec47 445 SUPERFAMILY SSF55874 296 437 3.27E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2897 72082ab5bc384efc37dd0835de12ec47 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 3.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2897 72082ab5bc384efc37dd0835de12ec47 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 3.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_2897 72082ab5bc384efc37dd0835de12ec47 445 Gene3D G3DSA:3.30.565.10 301 441 1.1E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_2897 72082ab5bc384efc37dd0835de12ec47 445 Gene3D G3DSA:1.10.287.130 174 282 5.6E-7 T 12-10-2018 PA257_2897 72082ab5bc384efc37dd0835de12ec47 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 437 2.5E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_3312 0ea75561b8a8bab0be6fc7438b243ef3 278 Pfam PF00005 ABC transporter 27 167 1.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_3312 0ea75561b8a8bab0be6fc7438b243ef3 278 SUPERFAMILY SSF52540 9 238 1.82E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3312 0ea75561b8a8bab0be6fc7438b243ef3 278 Gene3D G3DSA:3.40.50.300 3 265 1.5E-58 T 12-10-2018 PA257_3312 0ea75561b8a8bab0be6fc7438b243ef3 278 SMART SM00382 34 217 2.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4682 3629298a72af8315406ff1d0a46a03ae 329 PRINTS PR00069 Aldo-keto reductase signature 45 69 7.4E-11 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_4682 3629298a72af8315406ff1d0a46a03ae 329 PRINTS PR00069 Aldo-keto reductase signature 109 127 7.4E-11 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_4682 3629298a72af8315406ff1d0a46a03ae 329 PRINTS PR00069 Aldo-keto reductase signature 140 157 7.4E-11 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_4682 3629298a72af8315406ff1d0a46a03ae 329 Pfam PF00248 Aldo/keto reductase family 17 309 2.6E-74 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain PA257_4682 3629298a72af8315406ff1d0a46a03ae 329 Gene3D G3DSA:3.20.20.100 1 328 6.0E-125 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_4682 3629298a72af8315406ff1d0a46a03ae 329 SUPERFAMILY SSF51430 6 317 3.8E-95 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_0465 d0ac014d0a4b0140b2de5cbd2c8406da 206 Gene3D G3DSA:3.40.50.150 3 171 1.7E-27 T 12-10-2018 PA257_0465 d0ac014d0a4b0140b2de5cbd2c8406da 206 SUPERFAMILY SSF53335 3 192 7.86E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0465 d0ac014d0a4b0140b2de5cbd2c8406da 206 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 9.0E-92 T 12-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 PA257_0465 d0ac014d0a4b0140b2de5cbd2c8406da 206 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 194 8.6E-91 T 12-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 PA257_3293 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 SUPERFAMILY SSF161098 7 200 5.23E-46 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3293 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 217 1.1E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3293 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 Gene3D G3DSA:1.10.3720.10 2 216 1.1E-52 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1079 cc39419826291fc28b9aea40c6c3aa8b 316 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 310 1.8E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_1079 cc39419826291fc28b9aea40c6c3aa8b 316 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 294 1.8E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_1079 cc39419826291fc28b9aea40c6c3aa8b 316 SUPERFAMILY SSF46689 262 312 2.24E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1079 cc39419826291fc28b9aea40c6c3aa8b 316 Pfam PF14525 AraC-binding-like domain 14 168 4.6E-10 T 12-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like PA257_1079 cc39419826291fc28b9aea40c6c3aa8b 316 Gene3D G3DSA:1.10.10.60 206 313 2.8E-26 T 12-10-2018 PA257_1079 cc39419826291fc28b9aea40c6c3aa8b 316 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 261 306 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_1079 cc39419826291fc28b9aea40c6c3aa8b 316 SMART SM00342 225 310 1.5E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_1079 cc39419826291fc28b9aea40c6c3aa8b 316 Pfam PF12833 Helix-turn-helix domain 231 311 1.3E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0131 ca6c48466a5683aa24913dcc16163538 295 Gene3D G3DSA:1.20.120.80 77 295 3.2E-68 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0131 ca6c48466a5683aa24913dcc16163538 295 Gene3D G3DSA:1.10.287.70 1 76 1.4E-24 T 12-10-2018 PA257_0131 ca6c48466a5683aa24913dcc16163538 295 SUPERFAMILY SSF81452 3 294 7.85E-85 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0131 ca6c48466a5683aa24913dcc16163538 295 Pfam PF00510 Cytochrome c oxidase subunit III 7 294 2.3E-50 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4749 5ce1a30d745d10897cafffc27b2c1716 417 Pfam PF11862 Domain of unknown function (DUF3382) 3 105 7.9E-20 T 12-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal PA257_4749 5ce1a30d745d10897cafffc27b2c1716 417 Pfam PF02653 Branched-chain amino acid transport system / permease component 114 398 1.1E-51 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PA257_5488 c57db234d356038f482f09e520d7975f 102 Gene3D G3DSA:2.40.330.20 1 90 2.8E-27 T 12-10-2018 IPR038619 MraZ superfamily PA257_5488 c57db234d356038f482f09e520d7975f 102 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 102 36.726 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PA257_5488 c57db234d356038f482f09e520d7975f 102 SUPERFAMILY SSF89447 2 87 2.62E-27 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily PA257_5488 c57db234d356038f482f09e520d7975f 102 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 83 1.0E-33 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PA257_5488 c57db234d356038f482f09e520d7975f 102 Pfam PF02381 MraZ protein, putative antitoxin-like 29 83 1.7E-15 T 12-10-2018 IPR020603 MraZ domain PA257_4721 5939820a47c2ddb5bf9539c13503c75f 478 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 12 107 1.6E-20 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 PA257_4721 5939820a47c2ddb5bf9539c13503c75f 478 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 234 459 1.3E-61 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 PA257_4721 5939820a47c2ddb5bf9539c13503c75f 478 Pfam PF07196 Flagellin hook IN motif 127 186 8.2E-13 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 PA257_2812 5f78a87fe20a4fbab6b6c348599fdfa7 922 SUPERFAMILY SSF52540 202 425 1.88E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2812 5f78a87fe20a4fbab6b6c348599fdfa7 922 Gene3D G3DSA:3.40.50.300 252 456 3.9E-23 T 12-10-2018 PA257_2812 5f78a87fe20a4fbab6b6c348599fdfa7 922 Pfam PF04851 Type III restriction enzyme, res subunit 14 235 8.2E-28 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PA257_2812 5f78a87fe20a4fbab6b6c348599fdfa7 922 Gene3D G3DSA:3.40.50.300 8 250 8.3E-10 T 12-10-2018 PA257_2812 5f78a87fe20a4fbab6b6c348599fdfa7 922 SUPERFAMILY SSF52540 13 264 1.09E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1503 96c5962c4eaddb39dbf60040678a2806 413 SUPERFAMILY SSF103473 8 395 3.66E-50 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1503 96c5962c4eaddb39dbf60040678a2806 413 Gene3D G3DSA:1.20.1250.20 17 195 1.0E-23 T 12-10-2018 PA257_1503 96c5962c4eaddb39dbf60040678a2806 413 Pfam PF07690 Major Facilitator Superfamily 25 334 3.4E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1503 96c5962c4eaddb39dbf60040678a2806 413 Gene3D G3DSA:1.20.1250.20 207 396 1.3E-18 T 12-10-2018 PA257_2568 a2878a02d2c5cc7625b5b68a5e6758a6 423 Gene3D G3DSA:1.20.1250.20 11 198 1.9E-6 T 12-10-2018 PA257_2568 a2878a02d2c5cc7625b5b68a5e6758a6 423 SUPERFAMILY SSF103473 13 388 6.41E-29 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_2568 a2878a02d2c5cc7625b5b68a5e6758a6 423 Pfam PF07690 Major Facilitator Superfamily 214 396 4.0E-10 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_2568 a2878a02d2c5cc7625b5b68a5e6758a6 423 Gene3D G3DSA:1.20.1250.20 211 396 4.8E-14 T 12-10-2018 PA257_3823 64ddc81459df03bf516301b46a74703c 675 SUPERFAMILY SSF51998 127 660 3.66E-153 T 12-10-2018 PA257_3823 64ddc81459df03bf516301b46a74703c 675 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 126 659 1.4E-133 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PA257_3823 64ddc81459df03bf516301b46a74703c 675 Gene3D G3DSA:3.20.70.20 140 671 1.9E-103 T 12-10-2018 PA257_3823 64ddc81459df03bf516301b46a74703c 675 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 127 658 4.8E-168 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PA257_3823 64ddc81459df03bf516301b46a74703c 675 Pfam PF03477 ATP cone domain 14 96 4.3E-20 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 PA257_4851 9db4fcfde9c75cf05703b87373eb69a3 483 Pfam PF00171 Aldehyde dehydrogenase family 18 478 9.9E-156 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_4851 9db4fcfde9c75cf05703b87373eb69a3 483 Gene3D G3DSA:3.40.605.10 12 477 6.2E-166 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_4851 9db4fcfde9c75cf05703b87373eb69a3 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_4851 9db4fcfde9c75cf05703b87373eb69a3 483 Gene3D G3DSA:3.40.309.10 255 449 6.2E-166 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_4851 9db4fcfde9c75cf05703b87373eb69a3 483 SUPERFAMILY SSF53720 5 479 3.4E-152 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_0139 68d43444f221e5f3c88bb7e0b0ed4c7a 157 Pfam PF01638 HxlR-like helix-turn-helix 19 104 4.0E-23 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type PA257_0139 68d43444f221e5f3c88bb7e0b0ed4c7a 157 SUPERFAMILY SSF46785 6 144 2.03E-43 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0139 68d43444f221e5f3c88bb7e0b0ed4c7a 157 Gene3D G3DSA:1.10.10.10 2 152 9.6E-52 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2271 0452ed6af940d325eddaa765779f384e 198 Pfam PF12804 MobA-like NTP transferase domain 12 165 3.0E-31 T 12-10-2018 IPR025877 MobA-like NTP transferase PA257_2271 0452ed6af940d325eddaa765779f384e 198 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 7 194 25.757 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 PA257_2271 0452ed6af940d325eddaa765779f384e 198 SUPERFAMILY SSF53448 8 189 7.77E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_2271 0452ed6af940d325eddaa765779f384e 198 Gene3D G3DSA:3.90.550.10 7 197 7.3E-49 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_2271 0452ed6af940d325eddaa765779f384e 198 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 9 191 9.8E-59 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 PA257_0871 c5a4d7e4d5a3b43c3a745dc373d341e8 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 119 5.0E-14 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PA257_0871 c5a4d7e4d5a3b43c3a745dc373d341e8 349 Gene3D G3DSA:3.40.50.720 7 327 1.2E-88 T 12-10-2018 PA257_0871 c5a4d7e4d5a3b43c3a745dc373d341e8 349 PIRSF PIRSF017494 1 349 4.2E-118 T 12-10-2018 IPR010091 Thiazolinyl imide reductase PA257_0871 c5a4d7e4d5a3b43c3a745dc373d341e8 349 Gene3D G3DSA:3.30.360.10 125 284 1.2E-88 T 12-10-2018 PA257_0871 c5a4d7e4d5a3b43c3a745dc373d341e8 349 SUPERFAMILY SSF51735 13 139 1.54E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0871 c5a4d7e4d5a3b43c3a745dc373d341e8 349 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 2 332 5.1E-144 T 12-10-2018 IPR010091 Thiazolinyl imide reductase PA257_0189 ca54607b1f7740b39c29262533082461 444 Gene3D G3DSA:2.40.160.10 34 443 7.8E-174 T 12-10-2018 IPR023614 Porin domain superfamily PA257_0189 ca54607b1f7740b39c29262533082461 444 Pfam PF03573 outer membrane porin, OprD family 29 442 2.5E-152 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_4752 19fffb0c27aaf0d672dae716fdb872b9 764 SUPERFAMILY SSF48452 195 529 1.14E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4752 19fffb0c27aaf0d672dae716fdb872b9 764 SUPERFAMILY SSF48452 469 536 4.55E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4752 19fffb0c27aaf0d672dae716fdb872b9 764 Gene3D G3DSA:1.25.40.10 48 535 2.2E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2524 94e95c55553820d3b80530352f986323 98 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 1 82 4.5E-31 T 12-10-2018 IPR019110 Uncharacterised protein family, RAQPRD PA257_2524 94e95c55553820d3b80530352f986323 98 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 7 81 2.1E-26 T 12-10-2018 IPR019110 Uncharacterised protein family, RAQPRD PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 Gene3D G3DSA:2.30.110.50 18 328 6.4E-87 T 12-10-2018 PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 SUPERFAMILY SSF69279 10 184 9.07E-57 T 12-10-2018 PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 SUPERFAMILY SSF69279 191 371 8.33E-42 T 12-10-2018 PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 SUPERFAMILY SSF69255 371 459 6.28E-34 T 12-10-2018 PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 SUPERFAMILY SSF69349 449 631 1.65E-40 T 12-10-2018 PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 Gene3D G3DSA:2.40.50.230 362 463 3.2E-44 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 511 5.4E-122 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 Pfam PF05954 Phage late control gene D protein (GPD) 29 327 1.0E-77 T 12-10-2018 PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 Gene3D G3DSA:3.55.50.10 95 188 6.4E-87 T 12-10-2018 PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 529 1.5E-202 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PA257_1988 cdb1935c2b380f28f28ee8b9dbdd6fa0 688 Gene3D G3DSA:3.30.1920.30 221 284 6.4E-87 T 12-10-2018 PA257_4862 30ddb8c949541a51119bdee10c8b2b01 215 Pfam PF13394 4Fe-4S single cluster domain 26 107 8.2E-11 T 12-10-2018 PA257_4862 30ddb8c949541a51119bdee10c8b2b01 215 Pfam PF04055 Radical SAM superfamily 28 160 5.0E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_4862 30ddb8c949541a51119bdee10c8b2b01 215 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 5 215 2.4E-111 T 12-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE PA257_4862 30ddb8c949541a51119bdee10c8b2b01 215 SUPERFAMILY SSF102114 27 106 1.44E-14 T 12-10-2018 PA257_4862 30ddb8c949541a51119bdee10c8b2b01 215 Gene3D G3DSA:3.20.20.70 4 209 1.7E-36 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_4862 30ddb8c949541a51119bdee10c8b2b01 215 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 212 35.844 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 PA257_4862 30ddb8c949541a51119bdee10c8b2b01 215 PIRSF PIRSF000370 3 215 2.6E-67 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 PA257_6315 59a4c5ccd0bdf673d21f1b01dc687407 324 Pfam PF01925 Sulfite exporter TauE/SafE 86 317 2.3E-36 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PA257_5818 62a7bfc1ade7f8c3f89021b3b93c1cd7 204 Pfam PF02586 SOS response associated peptidase (SRAP) 1 191 1.2E-33 T 12-10-2018 IPR003738 SOS response associated peptidase (SRAP) PA257_5818 62a7bfc1ade7f8c3f89021b3b93c1cd7 204 SUPERFAMILY SSF143081 3 199 1.05E-43 T 12-10-2018 IPR036590 SOS response associated peptidase-like PA257_5818 62a7bfc1ade7f8c3f89021b3b93c1cd7 204 Gene3D G3DSA:3.90.1680.10 1 204 8.2E-42 T 12-10-2018 IPR036590 SOS response associated peptidase-like PA257_5459 e125440435a4fea631adba9b7284e34a 594 Pfam PF13000 Acetyl-coenzyme A transporter 1 21 107 2.9E-7 T 12-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 PA257_5459 e125440435a4fea631adba9b7284e34a 594 TIGRFAM TIGR00901 2A0125: AmpG-like permease 29 534 2.6E-166 T 12-10-2018 PA257_5459 e125440435a4fea631adba9b7284e34a 594 SUPERFAMILY SSF103473 12 579 8.5E-20 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_5459 e125440435a4fea631adba9b7284e34a 594 Gene3D G3DSA:1.20.1250.20 11 212 1.2E-8 T 12-10-2018 PA257_5459 e125440435a4fea631adba9b7284e34a 594 Gene3D G3DSA:1.20.1250.20 368 583 9.7E-7 T 12-10-2018 PA257_3256 4d756d06b33931c371e95f2fbc889168 107 Gene3D G3DSA:1.10.10.10 4 81 3.6E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3256 4d756d06b33931c371e95f2fbc889168 107 SUPERFAMILY SSF46785 6 74 2.66E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3256 4d756d06b33931c371e95f2fbc889168 107 PIRSF PIRSF029502 1 98 1.8E-50 T 12-10-2018 IPR016921 Uncharacterised conserved protein UCP029502 PA257_5997 b25115bb68686a75a18d18d8467ccf25 132 SMART SM00422 1 70 1.0E-32 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5997 b25115bb68686a75a18d18d8467ccf25 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.0E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5997 b25115bb68686a75a18d18d8467ccf25 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.0E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5997 b25115bb68686a75a18d18d8467ccf25 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.0E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5997 b25115bb68686a75a18d18d8467ccf25 132 SUPERFAMILY SSF46955 1 126 5.13E-40 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_5997 b25115bb68686a75a18d18d8467ccf25 132 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.7E-53 T 12-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 PA257_5997 b25115bb68686a75a18d18d8467ccf25 132 Pfam PF09278 MerR, DNA binding 44 108 2.5E-21 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding PA257_5997 b25115bb68686a75a18d18d8467ccf25 132 Gene3D G3DSA:1.10.1660.10 1 125 7.9E-38 T 12-10-2018 PA257_5997 b25115bb68686a75a18d18d8467ccf25 132 Pfam PF00376 MerR family regulatory protein 2 39 6.8E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0073 daa3dfa55f7240f1b38cf959c071161f 182 Gene3D G3DSA:1.10.10.970 7 78 2.4E-16 T 12-10-2018 PA257_0073 daa3dfa55f7240f1b38cf959c071161f 182 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 8 172 8.0E-36 T 12-10-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 PA257_0073 daa3dfa55f7240f1b38cf959c071161f 182 Gene3D G3DSA:3.20.170.30 99 182 1.8E-29 T 12-10-2018 PA257_0073 daa3dfa55f7240f1b38cf959c071161f 182 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 5 179 34.899 T 12-10-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 PA257_0073 daa3dfa55f7240f1b38cf959c071161f 182 SUPERFAMILY SSF56399 9 179 8.92E-56 T 12-10-2018 PA257_1505 d792b2d434317e6b63ed98ce70753d68 568 Pfam PF14903 WG containing repeat 130 164 4.7E-4 T 12-10-2018 IPR032774 WG containing repeat PA257_1505 d792b2d434317e6b63ed98ce70753d68 568 Pfam PF14903 WG containing repeat 316 336 0.0085 T 12-10-2018 IPR032774 WG containing repeat PA257_1505 d792b2d434317e6b63ed98ce70753d68 568 Pfam PF14903 WG containing repeat 277 305 0.23 T 12-10-2018 IPR032774 WG containing repeat PA257_1320 f5da2a4c0998617391541157e069cfaf 298 Gene3D G3DSA:1.10.10.10 6 94 1.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1320 f5da2a4c0998617391541157e069cfaf 298 Gene3D G3DSA:3.40.190.10 102 282 1.7E-47 T 12-10-2018 PA257_1320 f5da2a4c0998617391541157e069cfaf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1320 f5da2a4c0998617391541157e069cfaf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1320 f5da2a4c0998617391541157e069cfaf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1320 f5da2a4c0998617391541157e069cfaf 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_1320 f5da2a4c0998617391541157e069cfaf 298 Pfam PF03466 LysR substrate binding domain 90 286 1.6E-39 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1320 f5da2a4c0998617391541157e069cfaf 298 SUPERFAMILY SSF53850 92 291 5.25E-43 T 12-10-2018 PA257_1320 f5da2a4c0998617391541157e069cfaf 298 SUPERFAMILY SSF46785 7 113 4.61E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1320 f5da2a4c0998617391541157e069cfaf 298 Gene3D G3DSA:3.40.190.10 162 255 1.7E-47 T 12-10-2018 PA257_1399 2cecbcfe90459f8894f78ebc8099b5ea 298 Pfam PF13557 Putative MetA-pathway of phenol degradation 71 294 2.3E-28 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative PA257_5942 826a981d228fba72e4ef796418101693 162 Gene3D G3DSA:3.30.70.560 2 158 2.5E-54 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PA257_5942 826a981d228fba72e4ef796418101693 162 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PA257_5942 826a981d228fba72e4ef796418101693 162 SUPERFAMILY SSF55083 3 157 1.07E-53 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PA257_5942 826a981d228fba72e4ef796418101693 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 134 4.4E-36 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PA257_5942 826a981d228fba72e4ef796418101693 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 1.8E-43 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PA257_3306 618922e87eb2a5663a95ac49507998a2 310 Gene3D G3DSA:1.10.3720.10 66 308 5.7E-53 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3306 618922e87eb2a5663a95ac49507998a2 310 SUPERFAMILY SSF161098 70 295 1.7E-48 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3306 618922e87eb2a5663a95ac49507998a2 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 306 6.6E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_2781 ba0b109136fc137d690fceb46fb7ffd2 76 Gene3D G3DSA:1.10.10.1130 1 76 7.3E-29 T 12-10-2018 PA257_2781 ba0b109136fc137d690fceb46fb7ffd2 76 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 4.1E-29 T 12-10-2018 IPR021250 Protein of unknown function DUF2789 PA257_3038 5add8a137ae63e519fb3dce1a0778f41 374 Gene3D G3DSA:3.40.640.10 55 272 9.0E-87 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_3038 5add8a137ae63e519fb3dce1a0778f41 374 SUPERFAMILY SSF53383 42 363 1.41E-62 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3038 5add8a137ae63e519fb3dce1a0778f41 374 Gene3D G3DSA:3.90.1150.10 40 354 9.0E-87 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_3038 5add8a137ae63e519fb3dce1a0778f41 374 Pfam PF00155 Aminotransferase class I and II 58 358 1.2E-37 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_2526 f968dc7b347090c376817930223ce372 202 SUPERFAMILY SSF56524 18 201 1.22E-53 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_2526 f968dc7b347090c376817930223ce372 202 Gene3D G3DSA:3.90.420.10 36 201 1.1E-38 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_2526 f968dc7b347090c376817930223ce372 202 Pfam PF00174 Oxidoreductase molybdopterin binding domain 37 184 1.9E-31 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PA257_1910 cf92238f22b39b9bdc0beb33e73b38c6 385 Gene3D G3DSA:3.40.50.2300 123 358 6.2E-136 T 12-10-2018 PA257_1910 cf92238f22b39b9bdc0beb33e73b38c6 385 SUPERFAMILY SSF53822 10 375 4.04E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_1910 cf92238f22b39b9bdc0beb33e73b38c6 385 Gene3D G3DSA:3.40.50.2300 10 338 6.2E-136 T 12-10-2018 PA257_1910 cf92238f22b39b9bdc0beb33e73b38c6 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 6.7E-8 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_1910 cf92238f22b39b9bdc0beb33e73b38c6 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 237 255 6.7E-8 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_1910 cf92238f22b39b9bdc0beb33e73b38c6 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 81 6.7E-8 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PA257_1910 cf92238f22b39b9bdc0beb33e73b38c6 385 Pfam PF13433 Periplasmic binding protein domain 10 369 1.1E-113 T 12-10-2018 PA257_3837 a175e2facfc64c2e3ed23f9c05e30f7d 383 Pfam PF03929 PepSY-associated TM region 12 360 1.2E-54 T 12-10-2018 IPR005625 PepSY-associated TM protein PA257_5851 3d2df52bd5eb26e52e47ae8eaa72fdb7 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PA257_5851 3d2df52bd5eb26e52e47ae8eaa72fdb7 360 Gene3D G3DSA:3.30.70.1660 113 344 1.0E-97 T 12-10-2018 PA257_5851 3d2df52bd5eb26e52e47ae8eaa72fdb7 360 Pfam PF03462 PCRF domain 13 205 1.3E-73 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 PA257_5851 3d2df52bd5eb26e52e47ae8eaa72fdb7 360 Gene3D G3DSA:3.30.160.20 212 299 1.0E-97 T 12-10-2018 PA257_5851 3d2df52bd5eb26e52e47ae8eaa72fdb7 360 SUPERFAMILY SSF75620 12 355 5.62E-135 T 12-10-2018 PA257_5851 3d2df52bd5eb26e52e47ae8eaa72fdb7 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 4.6E-167 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PA257_5851 3d2df52bd5eb26e52e47ae8eaa72fdb7 360 SMART SM00937 65 180 1.4E-67 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 PA257_5851 3d2df52bd5eb26e52e47ae8eaa72fdb7 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.428 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PA257_5851 3d2df52bd5eb26e52e47ae8eaa72fdb7 360 Pfam PF00472 RF-1 domain 215 323 2.8E-42 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PA257_2010 0ec8373baf9bb690b26aef2fb6b9b234 109 SUPERFAMILY SSF103481 6 106 1.16E-7 T 12-10-2018 PA257_2010 0ec8373baf9bb690b26aef2fb6b9b234 109 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 106 22.672 T 12-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 PA257_2010 0ec8373baf9bb690b26aef2fb6b9b234 109 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 3 106 1.4E-27 T 12-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 PA257_3879 5f892981c9eb9003aa68428b89efe987 418 SUPERFAMILY SSF51261 226 365 6.28E-18 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_3879 5f892981c9eb9003aa68428b89efe987 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 372 395 6.2E-57 T 12-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 PA257_3879 5f892981c9eb9003aa68428b89efe987 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 293 311 6.2E-57 T 12-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 PA257_3879 5f892981c9eb9003aa68428b89efe987 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 266 284 6.2E-57 T 12-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 PA257_3879 5f892981c9eb9003aa68428b89efe987 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 345 365 6.2E-57 T 12-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 PA257_3879 5f892981c9eb9003aa68428b89efe987 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 244 265 6.2E-57 T 12-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 PA257_3879 5f892981c9eb9003aa68428b89efe987 418 Pfam PF01551 Peptidase family M23 286 366 1.7E-11 T 12-10-2018 IPR016047 Peptidase M23 PA257_3879 5f892981c9eb9003aa68428b89efe987 418 Gene3D G3DSA:2.70.70.10 237 418 4.3E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_5992 64d0785a7c80488b736c0952be6a73d2 160 Gene3D G3DSA:3.30.160.750 73 129 5.0E-20 T 12-10-2018 PA257_5992 64d0785a7c80488b736c0952be6a73d2 160 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 11 127 31.184 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 PA257_5992 64d0785a7c80488b736c0952be6a73d2 160 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 13 123 4.0E-45 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 PA257_5992 64d0785a7c80488b736c0952be6a73d2 160 SUPERFAMILY SSF56276 13 124 3.26E-38 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 PA257_5992 64d0785a7c80488b736c0952be6a73d2 160 Pfam PF02675 S-adenosylmethionine decarboxylase 18 123 2.9E-34 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 PA257_5992 64d0785a7c80488b736c0952be6a73d2 160 Gene3D G3DSA:3.30.360.110 11 72 6.6E-24 T 12-10-2018 PA257_6548 22604c52654910a341a4635882c6ab02 166 Gene3D G3DSA:2.40.70.10 7 136 2.6E-35 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_6548 22604c52654910a341a4635882c6ab02 166 SUPERFAMILY SSF50630 9 143 9.64E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_6548 22604c52654910a341a4635882c6ab02 166 Pfam PF05618 Putative ATP-dependant zinc protease 9 146 5.2E-48 T 12-10-2018 PA257_6249 260fa6dd7329284221cbea6a2384d797 337 SUPERFAMILY SSF101898 44 276 2.88E-8 T 12-10-2018 PA257_6249 260fa6dd7329284221cbea6a2384d797 337 Pfam PF13449 Esterase-like activity of phytase 44 194 2.7E-12 T 12-10-2018 IPR027372 Phytase-like domain PA257_4692 3a35f954e8d4533f24cb2fd5256b37d1 158 Gene3D G3DSA:3.30.1330.60 20 158 3.4E-49 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_4692 3a35f954e8d4533f24cb2fd5256b37d1 158 Pfam PF00691 OmpA family 55 149 1.1E-20 T 12-10-2018 IPR006665 OmpA-like domain PA257_4692 3a35f954e8d4533f24cb2fd5256b37d1 158 SUPERFAMILY SSF103088 42 155 3.14E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_4692 3a35f954e8d4533f24cb2fd5256b37d1 158 PRINTS PR01021 OMPA domain signature 55 77 1.4E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_4692 3a35f954e8d4533f24cb2fd5256b37d1 158 PRINTS PR01021 OMPA domain signature 100 116 1.4E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_4692 3a35f954e8d4533f24cb2fd5256b37d1 158 PRINTS PR01021 OMPA domain signature 85 100 1.4E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PA257_1990 b29a963a5e1f51ba2f5eb9f2049c192d 173 Pfam PF11745 Protein of unknown function (DUF3304) 19 145 1.2E-37 T 12-10-2018 IPR021733 Protein of unknown function DUF3304 PA257_4072 04db7cfa6c17c045418a8311f03e9ee2 109 Gene3D G3DSA:1.25.40.10 1 109 6.2E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4072 04db7cfa6c17c045418a8311f03e9ee2 109 PIRSF PIRSF017117 1 109 3.2E-40 T 12-10-2018 IPR016684 Type III secretion system chaperone, YscY PA257_4072 04db7cfa6c17c045418a8311f03e9ee2 109 SUPERFAMILY SSF48452 2 109 1.54E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2041 5cd141b901caa6cac69bb02a6a50fe58 183 Gene3D G3DSA:3.40.630.30 2 176 3.2E-40 T 12-10-2018 PA257_2041 5cd141b901caa6cac69bb02a6a50fe58 183 Pfam PF13302 Acetyltransferase (GNAT) domain 20 150 7.8E-18 T 12-10-2018 IPR000182 GNAT domain PA257_2041 5cd141b901caa6cac69bb02a6a50fe58 183 SUPERFAMILY SSF55729 5 174 4.58E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6728 17baa2193a726d5c86b087e5c22822a9 283 SUPERFAMILY SSF51735 1 279 5.71E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_6728 17baa2193a726d5c86b087e5c22822a9 283 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 164 7.5E-8 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_6728 17baa2193a726d5c86b087e5c22822a9 283 Gene3D G3DSA:3.40.50.720 2 283 2.4E-86 T 12-10-2018 PA257_6127 a26cd4877b5fc3c0362472cfbb63d889 425 Pfam PF13719 zinc-ribbon domain 6 41 2.3E-10 T 12-10-2018 IPR011723 Zinc finger/thioredoxin putative PA257_6127 a26cd4877b5fc3c0362472cfbb63d889 425 Pfam PF11906 Protein of unknown function (DUF3426) 276 421 2.6E-37 T 12-10-2018 IPR021834 Protein of unknown function DUF3426 PA257_6127 a26cd4877b5fc3c0362472cfbb63d889 425 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 41 3.6E-18 T 12-10-2018 IPR011723 Zinc finger/thioredoxin putative PA257_6255 8796d34a5d0fbce08d42038e336e27ac 248 Gene3D G3DSA:3.90.640.20 154 248 6.0E-24 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily PA257_6255 8796d34a5d0fbce08d42038e336e27ac 248 Pfam PF11738 Protein of unknown function (DUF3298) 183 232 2.5E-5 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 PA257_6255 8796d34a5d0fbce08d42038e336e27ac 248 Gene3D G3DSA:3.30.565.40 23 153 5.2E-40 T 12-10-2018 PA257_0232 95da3f361c07ecbd5d07f340cbc0582f 193 Pfam PF06821 Serine hydrolase 8 178 6.8E-69 T 12-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 PA257_0232 95da3f361c07ecbd5d07f340cbc0582f 193 SUPERFAMILY SSF53474 8 180 4.2E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0232 95da3f361c07ecbd5d07f340cbc0582f 193 Gene3D G3DSA:3.40.50.1820 1 187 2.1E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6212 eb32536446e0e6cc412afa670f6097af 464 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 1.6E-37 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PA257_6212 eb32536446e0e6cc412afa670f6097af 464 Pfam PF03796 DnaB-like helicase C terminal domain 197 453 1.8E-113 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 PA257_6212 eb32536446e0e6cc412afa670f6097af 464 SUPERFAMILY SSF48024 18 129 1.31E-40 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 PA257_6212 eb32536446e0e6cc412afa670f6097af 464 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 455 4.5E-177 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 PA257_6212 eb32536446e0e6cc412afa670f6097af 464 Gene3D G3DSA:1.10.860.10 13 178 7.0E-58 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PA257_6212 eb32536446e0e6cc412afa670f6097af 464 Gene3D G3DSA:3.40.50.300 179 459 9.3E-107 T 12-10-2018 PA257_6212 eb32536446e0e6cc412afa670f6097af 464 SUPERFAMILY SSF52540 196 446 7.77E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5592 eb2ba94225fc699254944b829a0adf15 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 484 638 1.1E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5592 eb2ba94225fc699254944b829a0adf15 673 SMART SM00304 399 449 78.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5592 eb2ba94225fc699254944b829a0adf15 673 SMART SM00304 344 396 5.4E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5592 eb2ba94225fc699254944b829a0adf15 673 SUPERFAMILY SSF58104 364 673 1.44E-74 T 12-10-2018 PA257_5592 eb2ba94225fc699254944b829a0adf15 673 SMART SM00283 411 672 3.7E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_5592 eb2ba94225fc699254944b829a0adf15 673 Pfam PF00672 HAMP domain 350 391 2.8E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PA257_5592 eb2ba94225fc699254944b829a0adf15 673 Gene3D G3DSA:1.10.287.950 345 673 3.8E-72 T 12-10-2018 PA257_5071 f22d730e98780ca5dbbf60745d07805c 278 Pfam PF01145 SPFH domain / Band 7 family 21 209 1.8E-21 T 12-10-2018 IPR001107 Band 7 domain PA257_5071 f22d730e98780ca5dbbf60745d07805c 278 SUPERFAMILY SSF117892 111 196 1.15E-5 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily PA257_5281 8d49ad397f54f03d813b0c1aa5f632c3 82 ProDom PD059964 COAT CAPSID B PA0723 3D-STRUCTURE MAJOR TRANSMEMBRANE MEMBRANE DIRECT PRECURSOR 1 82 5.0E-40 T 12-10-2018 IPR008020 Capsid protein G8P PA257_5281 8d49ad397f54f03d813b0c1aa5f632c3 82 Gene3D G3DSA:1.20.5.230 37 82 2.2E-28 T 12-10-2018 PA257_5281 8d49ad397f54f03d813b0c1aa5f632c3 82 Pfam PF05356 Phage Coat protein B 1 82 2.7E-52 T 12-10-2018 IPR008020 Capsid protein G8P PA257_5281 8d49ad397f54f03d813b0c1aa5f632c3 82 SUPERFAMILY SSF57987 37 82 4.03E-24 T 12-10-2018 PA257_6349 0dd70ae705fbbd14789ba267ebeb9280 285 TIGRFAM TIGR02240 PHA_depoly_arom: poly(3-hydroxyalkanoate) depolymerase 4 279 7.2E-192 T 12-10-2018 IPR011942 Poly(3-hydroxyalkanoate) depolymerase PA257_6349 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 3.9E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_6349 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 3.9E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_6349 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 3.9E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_6349 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.9E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_6349 0dd70ae705fbbd14789ba267ebeb9280 285 Pfam PF00561 alpha/beta hydrolase fold 30 251 1.4E-28 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_6349 0dd70ae705fbbd14789ba267ebeb9280 285 Gene3D G3DSA:3.40.50.1820 7 267 4.5E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6349 0dd70ae705fbbd14789ba267ebeb9280 285 SUPERFAMILY SSF53474 3 267 9.4E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 Gene3D G3DSA:1.20.200.10 144 412 1.5E-110 T 12-10-2018 PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 SUPERFAMILY SSF48557 7 465 1.31E-144 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 8 467 1.7E-206 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 Pfam PF00206 Lyase 15 347 4.1E-97 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 Pfam PF10415 Fumarase C C-terminus 413 465 3.1E-19 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 Gene3D G3DSA:1.10.40.30 413 464 6.4E-19 T 12-10-2018 PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 1.9E-28 T 12-10-2018 IPR000362 Fumarate lyase family PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 1.9E-28 T 12-10-2018 IPR000362 Fumarate lyase family PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.9E-28 T 12-10-2018 IPR000362 Fumarate lyase family PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 1.9E-28 T 12-10-2018 IPR000362 Fumarate lyase family PA257_6825 a4bdbb1007e4faeaba40299645b7c143 474 Gene3D G3DSA:1.10.275.10 5 143 3.2E-58 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal PA257_4442 a2536d1f44639943c21688e52da97aa9 249 Pfam PF05988 Bacterial protein of unknown function (DUF899) 6 234 1.8E-96 T 12-10-2018 IPR010296 Protein of unknown function DUF899, thioredoxin-like PA257_4442 a2536d1f44639943c21688e52da97aa9 249 SUPERFAMILY SSF52833 61 200 4.93E-9 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4442 a2536d1f44639943c21688e52da97aa9 249 Gene3D G3DSA:3.40.30.10 52 202 2.0E-6 T 12-10-2018 PA257_4742 be07e366e7fef4b6c911f932c5dccd28 146 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 146 6.5E-49 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 PA257_4742 be07e366e7fef4b6c911f932c5dccd28 146 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 98 144 2.2E-14 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PA257_4742 be07e366e7fef4b6c911f932c5dccd28 146 Pfam PF00460 Flagella basal body rod protein 7 34 1.5E-9 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PA257_4742 be07e366e7fef4b6c911f932c5dccd28 146 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site PA257_5003 ee028ded598c80f8ab80c0a4b8d0aa83 246 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 9 225 7.2E-36 T 12-10-2018 PA257_5003 ee028ded598c80f8ab80c0a4b8d0aa83 246 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 3 243 27.592 T 12-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 PA257_3382 c209027b3bc9711ccd3017c047a9cee8 435 SUPERFAMILY SSF103473 5 417 5.23E-86 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3382 c209027b3bc9711ccd3017c047a9cee8 435 Gene3D G3DSA:1.20.1250.20 222 419 2.2E-37 T 12-10-2018 PA257_3382 c209027b3bc9711ccd3017c047a9cee8 435 PIRSF PIRSF002808 3 428 1.6E-35 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 PA257_3382 c209027b3bc9711ccd3017c047a9cee8 435 Gene3D G3DSA:1.20.1250.20 6 203 4.5E-39 T 12-10-2018 PA257_3382 c209027b3bc9711ccd3017c047a9cee8 435 Pfam PF07690 Major Facilitator Superfamily 18 375 3.4E-56 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4106 ed4a6ae17d9b7abbee94c399cf2330ac 1175 SUPERFAMILY SSF52540 117 332 1.15E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4106 ed4a6ae17d9b7abbee94c399cf2330ac 1175 Pfam PF14331 ImcF-related N-terminal domain 198 452 9.5E-78 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain PA257_4106 ed4a6ae17d9b7abbee94c399cf2330ac 1175 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 18 1172 0.0 T 12-10-2018 IPR017731 Type VI secretion system, IcmF PA257_4106 ed4a6ae17d9b7abbee94c399cf2330ac 1175 Pfam PF06761 Intracellular multiplication and human macrophage-killing 518 792 1.1E-69 T 12-10-2018 IPR009612 ImcF-related PA257_4106 ed4a6ae17d9b7abbee94c399cf2330ac 1175 Pfam PF06744 Type VI secretion protein IcmF C-terminal 923 1123 6.5E-57 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal PA257_1202 078c4f2d34ceb3328cd26197287799f7 238 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 235 8.8E-67 T 12-10-2018 IPR018648 Protein of unknown function DUF2076 PA257_0462 b369382ee50530c6482e17b929af1e19 363 Pfam PF06969 HemN C-terminal domain 289 351 5.6E-13 T 12-10-2018 IPR010723 HemN, C-terminal PA257_0462 b369382ee50530c6482e17b929af1e19 363 Gene3D G3DSA:3.80.30.20 1 282 1.6E-88 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PA257_0462 b369382ee50530c6482e17b929af1e19 363 SMART SM00729 1 206 2.6E-44 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PA257_0462 b369382ee50530c6482e17b929af1e19 363 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 2 325 1.7E-109 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 PA257_0462 b369382ee50530c6482e17b929af1e19 363 SUPERFAMILY SSF102114 2 362 2.75E-98 T 12-10-2018 PA257_0462 b369382ee50530c6482e17b929af1e19 363 Pfam PF04055 Radical SAM superfamily 2 161 8.8E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_3403 9ef65207394e3cf3c2f863ca53cf83e9 333 SUPERFAMILY SSF56349 90 306 1.63E-67 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_3403 9ef65207394e3cf3c2f863ca53cf83e9 333 Gene3D G3DSA:3.90.15.10 125 244 7.8E-83 T 12-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 PA257_3403 9ef65207394e3cf3c2f863ca53cf83e9 333 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 94 268 6.4E-28 T 12-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 PA257_3403 9ef65207394e3cf3c2f863ca53cf83e9 333 Gene3D G3DSA:1.10.132.120 102 325 7.8E-83 T 12-10-2018 PA257_3403 9ef65207394e3cf3c2f863ca53cf83e9 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 134 153 4.0E-7 T 12-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PA257_3403 9ef65207394e3cf3c2f863ca53cf83e9 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 178 194 4.0E-7 T 12-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PA257_3403 9ef65207394e3cf3c2f863ca53cf83e9 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 243 257 4.0E-7 T 12-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PA257_3403 9ef65207394e3cf3c2f863ca53cf83e9 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 157 171 4.0E-7 T 12-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PA257_3403 9ef65207394e3cf3c2f863ca53cf83e9 333 Gene3D G3DSA:3.30.66.10 18 101 2.0E-33 T 12-10-2018 IPR035447 DNA topoisomerase I, N-terminal PA257_3403 9ef65207394e3cf3c2f863ca53cf83e9 333 SUPERFAMILY SSF55869 34 95 3.14E-23 T 12-10-2018 IPR035447 DNA topoisomerase I, N-terminal PA257_3573 e4c7e8b3a871295ad0a2ccb61d0d64b1 331 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 30 304 9.8E-12 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PA257_0846 24c12e1bd308a74e7944f0a47a29f265 104 Gene3D G3DSA:3.30.1370.30 1 46 7.2E-13 T 12-10-2018 PA257_0846 24c12e1bd308a74e7944f0a47a29f265 104 SUPERFAMILY SSF56047 1 104 2.22E-36 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0846 24c12e1bd308a74e7944f0a47a29f265 104 Pfam PF00410 Ribosomal protein S8 1 104 2.0E-38 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0846 24c12e1bd308a74e7944f0a47a29f265 104 ProSitePatterns PS00053 Ribosomal protein S8 signature. 74 91 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PA257_0846 24c12e1bd308a74e7944f0a47a29f265 104 Gene3D G3DSA:3.30.1490.10 47 103 2.2E-24 T 12-10-2018 PA257_6683 cd1e4ac5765d647a7b351b4f3a9a1adc 142 PRINTS PR00607 Class IE cytochrome C signature 84 94 1.7E-19 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6683 cd1e4ac5765d647a7b351b4f3a9a1adc 142 PRINTS PR00607 Class IE cytochrome C signature 129 140 1.7E-19 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6683 cd1e4ac5765d647a7b351b4f3a9a1adc 142 PRINTS PR00607 Class IE cytochrome C signature 114 126 1.7E-19 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6683 cd1e4ac5765d647a7b351b4f3a9a1adc 142 PRINTS PR00607 Class IE cytochrome C signature 73 84 1.7E-19 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6683 cd1e4ac5765d647a7b351b4f3a9a1adc 142 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 63 139 2.2E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_6683 cd1e4ac5765d647a7b351b4f3a9a1adc 142 Gene3D G3DSA:1.10.760.10 60 142 3.2E-32 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6683 cd1e4ac5765d647a7b351b4f3a9a1adc 142 SUPERFAMILY SSF46626 61 141 1.32E-16 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4728 59361eeb0408287a7ff07e9e6b3423e3 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 154 1.0E-5 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_4728 59361eeb0408287a7ff07e9e6b3423e3 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 157 190 1.3E-6 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_4728 59361eeb0408287a7ff07e9e6b3423e3 210 Gene3D G3DSA:3.40.50.20 1 88 2.1E-10 T 12-10-2018 PA257_4728 59361eeb0408287a7ff07e9e6b3423e3 210 SUPERFAMILY SSF51161 49 207 3.33E-33 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_4728 59361eeb0408287a7ff07e9e6b3423e3 210 Gene3D G3DSA:2.160.10.10 89 210 3.8E-27 T 12-10-2018 PA257_0001 4ad46588d2973282f90d82411eabbe42 512 SUPERFAMILY SSF48295 408 510 6.28E-37 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 PA257_0001 4ad46588d2973282f90d82411eabbe42 512 Gene3D G3DSA:1.10.1750.10 419 512 1.7E-37 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 PA257_0001 4ad46588d2973282f90d82411eabbe42 512 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 511 34.157 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PA257_0001 4ad46588d2973282f90d82411eabbe42 512 Gene3D G3DSA:3.30.300.180 1 102 1.1E-28 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily PA257_0001 4ad46588d2973282f90d82411eabbe42 512 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 421 489 9.2E-32 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PA257_0001 4ad46588d2973282f90d82411eabbe42 512 SMART SM00382 209 418 2.3E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0001 4ad46588d2973282f90d82411eabbe42 512 SUPERFAMILY SSF52540 178 388 2.17E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0001 4ad46588d2973282f90d82411eabbe42 512 SMART SM00760 420 489 9.1E-44 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PA257_0001 4ad46588d2973282f90d82411eabbe42 512 Pfam PF11638 DnaA N-terminal domain 2 61 6.4E-21 T 12-10-2018 IPR024633 DnaA N-terminal domain PA257_0001 4ad46588d2973282f90d82411eabbe42 512 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 510 1.8E-187 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PA257_0001 4ad46588d2973282f90d82411eabbe42 512 ProSitePatterns PS01008 DnaA protein signature. 470 489 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PA257_0001 4ad46588d2973282f90d82411eabbe42 512 Gene3D G3DSA:3.40.50.300 160 341 4.9E-49 T 12-10-2018 PA257_0001 4ad46588d2973282f90d82411eabbe42 512 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 242 256 1.8E-52 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PA257_0001 4ad46588d2973282f90d82411eabbe42 512 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 274 288 1.8E-52 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PA257_0001 4ad46588d2973282f90d82411eabbe42 512 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 210 230 1.8E-52 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PA257_0001 4ad46588d2973282f90d82411eabbe42 512 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 470 489 1.8E-52 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PA257_0001 4ad46588d2973282f90d82411eabbe42 512 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 308 335 1.8E-52 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PA257_0001 4ad46588d2973282f90d82411eabbe42 512 Pfam PF00308 Bacterial dnaA protein 177 394 9.4E-100 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA PA257_0001 4ad46588d2973282f90d82411eabbe42 512 Gene3D G3DSA:1.10.8.60 343 413 1.1E-23 T 12-10-2018 PA257_3802 2ff1a2d5f84bb09ee30b49cd9f788fba 631 SUPERFAMILY SSF46626 351 599 1.27E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0874 6631c2f4a0a9345d50d85a7bdf6d2a39 714 Pfam PF00593 TonB dependent receptor 282 711 5.6E-53 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_0874 6631c2f4a0a9345d50d85a7bdf6d2a39 714 Gene3D G3DSA:2.170.130.10 48 176 2.9E-31 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_0874 6631c2f4a0a9345d50d85a7bdf6d2a39 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 168 1.1E-11 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_0874 6631c2f4a0a9345d50d85a7bdf6d2a39 714 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 714 8.9E-177 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_0874 6631c2f4a0a9345d50d85a7bdf6d2a39 714 Gene3D G3DSA:2.40.170.20 177 714 1.3E-233 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_0874 6631c2f4a0a9345d50d85a7bdf6d2a39 714 SUPERFAMILY SSF56935 37 714 4.81E-130 T 12-10-2018 PA257_0874 6631c2f4a0a9345d50d85a7bdf6d2a39 714 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 697 714 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_0896 595a9efabe03b89451eecbdd29ca133d 288 Gene3D G3DSA:3.60.15.10 2 269 2.2E-65 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_0896 595a9efabe03b89451eecbdd29ca133d 288 Pfam PF00753 Metallo-beta-lactamase superfamily 42 257 1.9E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_0896 595a9efabe03b89451eecbdd29ca133d 288 SMART SM00849 43 257 1.8E-22 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_0896 595a9efabe03b89451eecbdd29ca133d 288 SUPERFAMILY SSF56281 3 270 2.1E-40 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_6144 4c11d990bb9696ffbbc0dcfd518cca18 101 Gene3D G3DSA:2.10.150.10 1 101 1.6E-48 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6144 4c11d990bb9696ffbbc0dcfd518cca18 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 1.5E-45 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6144 4c11d990bb9696ffbbc0dcfd518cca18 101 SUPERFAMILY SSF51278 1 101 1.06E-47 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6144 4c11d990bb9696ffbbc0dcfd518cca18 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.995 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_6144 4c11d990bb9696ffbbc0dcfd518cca18 101 Pfam PF00699 Urease beta subunit 3 99 8.5E-46 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PA257_1319 ed9fcc444eb577c93e656cf8636d309f 180 SUPERFAMILY SSF52499 2 178 3.92E-46 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_1319 ed9fcc444eb577c93e656cf8636d309f 180 Pfam PF00857 Isochorismatase family 8 156 4.9E-25 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_1319 ed9fcc444eb577c93e656cf8636d309f 180 Gene3D G3DSA:3.40.50.850 2 180 1.3E-48 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_5380 e8fa322f3b6ab5d81515360ba1156d0b 478 Gene3D G3DSA:1.20.1280.70 352 412 2.2E-26 T 12-10-2018 PA257_5380 e8fa322f3b6ab5d81515360ba1156d0b 478 Gene3D G3DSA:3.30.420.10 1 194 5.8E-71 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_5380 e8fa322f3b6ab5d81515360ba1156d0b 478 Pfam PF00929 Exonuclease 7 186 7.0E-25 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_5380 e8fa322f3b6ab5d81515360ba1156d0b 478 SUPERFAMILY SSF53098 5 451 2.63E-125 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_5380 e8fa322f3b6ab5d81515360ba1156d0b 478 PIRSF PIRSF000977 1 475 3.6E-203 T 12-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 PA257_5380 e8fa322f3b6ab5d81515360ba1156d0b 478 SMART SM00479 4 196 3.9E-4 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PA257_5380 e8fa322f3b6ab5d81515360ba1156d0b 478 Gene3D G3DSA:2.30.30.450 207 346 4.0E-48 T 12-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily PA257_5380 e8fa322f3b6ab5d81515360ba1156d0b 478 Pfam PF08411 Exonuclease C-terminal 205 468 3.6E-97 T 12-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 PA257_1960 fb98b66acdaa058d60b5456b6f77ac72 256 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 9 253 3.0E-73 T 12-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 PA257_1960 fb98b66acdaa058d60b5456b6f77ac72 256 SUPERFAMILY SSF161098 61 243 1.44E-29 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1960 fb98b66acdaa058d60b5456b6f77ac72 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 250 7.3E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_1960 fb98b66acdaa058d60b5456b6f77ac72 256 Gene3D G3DSA:1.10.3720.10 52 254 4.8E-29 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5114 4300a2573087278bcf9fc89704939743 494 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 14 494 9.9E-280 T 12-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 PA257_5114 4300a2573087278bcf9fc89704939743 494 Gene3D G3DSA:1.10.4100.10 23 472 3.8E-178 T 12-10-2018 PA257_5114 4300a2573087278bcf9fc89704939743 494 Pfam PF03972 MmgE/PrpD family 18 477 2.1E-152 T 12-10-2018 IPR005656 MmgE/PrpD GO:0016829 PA257_5114 4300a2573087278bcf9fc89704939743 494 Gene3D G3DSA:3.30.1330.120 298 437 3.8E-178 T 12-10-2018 PA257_5114 4300a2573087278bcf9fc89704939743 494 SUPERFAMILY SSF103378 13 492 8.11E-153 T 12-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 PA257_2811 ac9e2c89550ca1b8826a6209808066e6 563 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 332 346 1.3E-22 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PA257_2811 ac9e2c89550ca1b8826a6209808066e6 563 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 68 80 1.3E-22 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PA257_2811 ac9e2c89550ca1b8826a6209808066e6 563 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 309 331 1.3E-22 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PA257_2811 ac9e2c89550ca1b8826a6209808066e6 563 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 102 121 1.3E-22 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PA257_2811 ac9e2c89550ca1b8826a6209808066e6 563 PIRSF PIRSF015855 2 550 6.9E-112 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 PA257_2811 ac9e2c89550ca1b8826a6209808066e6 563 SUPERFAMILY SSF53335 42 380 3.1E-69 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2811 ac9e2c89550ca1b8826a6209808066e6 563 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 71 77 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_2811 ac9e2c89550ca1b8826a6209808066e6 563 Pfam PF01555 DNA methylase 68 361 1.2E-43 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 PA257_1144 86d1d1ca944804b81bb2139f04f5e3a1 285 SUPERFAMILY SSF53335 27 260 6.13E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1144 86d1d1ca944804b81bb2139f04f5e3a1 285 Gene3D G3DSA:3.40.50.150 25 279 5.2E-26 T 12-10-2018 PA257_1144 86d1d1ca944804b81bb2139f04f5e3a1 285 Pfam PF04072 Leucine carboxyl methyltransferase 60 180 7.7E-16 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 PA257_6829 588bfd07920df6f771dadc1e72d79d02 149 SUPERFAMILY SSF55729 5 136 5.15E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6829 588bfd07920df6f771dadc1e72d79d02 149 Pfam PF00583 Acetyltransferase (GNAT) family 42 135 2.2E-13 T 12-10-2018 IPR000182 GNAT domain PA257_6829 588bfd07920df6f771dadc1e72d79d02 149 Gene3D G3DSA:3.40.630.30 2 148 1.2E-37 T 12-10-2018 PA257_6704 24581ec7a8d0038bb40341c79ac17967 224 SUPERFAMILY SSF47781 18 90 1.04E-8 T 12-10-2018 IPR010994 RuvA domain 2-like PA257_6704 24581ec7a8d0038bb40341c79ac17967 224 SUPERFAMILY SSF102712 121 197 1.83E-5 T 12-10-2018 PA257_6704 24581ec7a8d0038bb40341c79ac17967 224 Gene3D G3DSA:3.40.140.10 100 224 2.4E-41 T 12-10-2018 PA257_6704 24581ec7a8d0038bb40341c79ac17967 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site PA257_6704 24581ec7a8d0038bb40341c79ac17967 224 Pfam PF04002 RadC-like JAB domain 104 222 4.2E-43 T 12-10-2018 IPR025657 RadC-like JAB domain PA257_6704 24581ec7a8d0038bb40341c79ac17967 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 7.4E-74 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 PA257_1950 54a0ae541ff817f80c4e3037317c3122 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 12-10-2018 IPR033135 ClpP, histidine active site PA257_1950 54a0ae541ff817f80c4e3037317c3122 201 Gene3D G3DSA:3.90.226.10 13 198 1.9E-58 T 12-10-2018 PA257_1950 54a0ae541ff817f80c4e3037317c3122 201 Pfam PF00574 Clp protease 19 192 4.8E-64 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PA257_1950 54a0ae541ff817f80c4e3037317c3122 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 193 32.757 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_1950 54a0ae541ff817f80c4e3037317c3122 201 SUPERFAMILY SSF52096 16 194 1.67E-54 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_1950 54a0ae541ff817f80c4e3037317c3122 201 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 3.0E-27 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_1950 54a0ae541ff817f80c4e3037317c3122 201 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 3.0E-27 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_1950 54a0ae541ff817f80c4e3037317c3122 201 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 3.0E-27 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_1950 54a0ae541ff817f80c4e3037317c3122 201 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 3.0E-27 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PA257_1981 4a4869dab49ff482cb46de1928b5d330 562 Gene3D G3DSA:3.40.50.12780 14 462 7.8E-112 T 12-10-2018 PA257_1981 4a4869dab49ff482cb46de1928b5d330 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_1981 4a4869dab49ff482cb46de1928b5d330 562 SUPERFAMILY SSF56801 21 561 1.57E-151 T 12-10-2018 PA257_1981 4a4869dab49ff482cb46de1928b5d330 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 478 552 6.0E-19 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_1981 4a4869dab49ff482cb46de1928b5d330 562 Gene3D G3DSA:3.30.300.310 465 562 1.1E-31 T 12-10-2018 PA257_1981 4a4869dab49ff482cb46de1928b5d330 562 Pfam PF00501 AMP-binding enzyme 30 469 2.4E-108 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_0865 d84ae7bd55f937b42165f8011c442711 102 Pfam PF01817 Chorismate mutase type II 15 91 3.7E-14 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_0865 d84ae7bd55f937b42165f8011c442711 102 TIGRFAM TIGR01803 CM-like: chorismate mutase related enzymes 11 91 1.6E-39 T 12-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_0865 d84ae7bd55f937b42165f8011c442711 102 Gene3D G3DSA:1.20.59.10 2 102 6.9E-38 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_0865 d84ae7bd55f937b42165f8011c442711 102 PIRSF PIRSF029775 1 102 1.3E-40 T 12-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_0865 d84ae7bd55f937b42165f8011c442711 102 SMART SM00830 15 94 4.0E-23 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_0865 d84ae7bd55f937b42165f8011c442711 102 SUPERFAMILY SSF48600 2 95 5.49E-25 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PA257_0907 443f9e78f7187e816fb1e86599a15ba5 242 SUPERFAMILY SSF46785 18 84 6.81E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0907 443f9e78f7187e816fb1e86599a15ba5 242 SMART SM00345 22 80 4.8E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0907 443f9e78f7187e816fb1e86599a15ba5 242 Gene3D G3DSA:1.20.120.530 86 228 1.6E-20 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_0907 443f9e78f7187e816fb1e86599a15ba5 242 Pfam PF07729 FCD domain 101 219 1.8E-18 T 12-10-2018 IPR011711 GntR, C-terminal PA257_0907 443f9e78f7187e816fb1e86599a15ba5 242 SMART SM00895 90 220 5.8E-12 T 12-10-2018 IPR011711 GntR, C-terminal PA257_0907 443f9e78f7187e816fb1e86599a15ba5 242 SUPERFAMILY SSF48008 101 227 6.8E-19 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_0907 443f9e78f7187e816fb1e86599a15ba5 242 Gene3D G3DSA:1.10.10.10 20 81 5.2E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0907 443f9e78f7187e816fb1e86599a15ba5 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 77 2.1E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_2484 8ae2713345b7e29c4f5b992b28b2c774 148 PRINTS PR01438 Universal stress protein signature 100 112 4.9E-9 T 12-10-2018 IPR006015 Universal stress protein A PA257_2484 8ae2713345b7e29c4f5b992b28b2c774 148 PRINTS PR01438 Universal stress protein signature 2 20 4.9E-9 T 12-10-2018 IPR006015 Universal stress protein A PA257_2484 8ae2713345b7e29c4f5b992b28b2c774 148 PRINTS PR01438 Universal stress protein signature 118 140 4.9E-9 T 12-10-2018 IPR006015 Universal stress protein A PA257_2484 8ae2713345b7e29c4f5b992b28b2c774 148 SUPERFAMILY SSF52402 1 138 3.21E-29 T 12-10-2018 PA257_2484 8ae2713345b7e29c4f5b992b28b2c774 148 Pfam PF00582 Universal stress protein family 1 138 5.2E-28 T 12-10-2018 IPR006016 UspA PA257_2484 8ae2713345b7e29c4f5b992b28b2c774 148 Gene3D G3DSA:3.40.50.620 1 141 1.5E-28 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_6735 6ef67f0f273137b64cc28549bf24951c 90 SMART SM00411 1 90 3.5E-38 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_6735 6ef67f0f273137b64cc28549bf24951c 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.1E-16 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_6735 6ef67f0f273137b64cc28549bf24951c 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.1E-16 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_6735 6ef67f0f273137b64cc28549bf24951c 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.1E-16 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_6735 6ef67f0f273137b64cc28549bf24951c 90 SUPERFAMILY SSF47729 1 90 2.65E-31 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_6735 6ef67f0f273137b64cc28549bf24951c 90 Gene3D G3DSA:4.10.520.10 1 90 1.5E-33 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_6735 6ef67f0f273137b64cc28549bf24951c 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PA257_6735 6ef67f0f273137b64cc28549bf24951c 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-32 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_5650 3bdb13f442ed021b891414344ea8711c 513 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 308 322 - T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_5650 3bdb13f442ed021b891414344ea8711c 513 SUPERFAMILY SSF52540 91 491 1.65E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5650 3bdb13f442ed021b891414344ea8711c 513 Gene3D G3DSA:3.30.450.90 62 201 3.8E-12 T 12-10-2018 PA257_5650 3bdb13f442ed021b891414344ea8711c 513 Pfam PF00437 Type II/IV secretion system protein 99 372 1.3E-40 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_5650 3bdb13f442ed021b891414344ea8711c 513 Gene3D G3DSA:3.40.50.300 206 493 6.6E-73 T 12-10-2018 PA257_5290 2a828f0bf9d58c7d49e50a48a32c5831 98 SUPERFAMILY SSF54909 3 83 2.02E-17 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_5290 2a828f0bf9d58c7d49e50a48a32c5831 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 4.5E-16 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PA257_5290 2a828f0bf9d58c7d49e50a48a32c5831 98 Gene3D G3DSA:3.30.70.100 1 90 4.5E-19 T 12-10-2018 PA257_2020 6e6150c05bf67a22a9655f183700a548 104 Gene3D G3DSA:1.10.3730.20 1 104 6.4E-32 T 12-10-2018 PA257_2020 6e6150c05bf67a22a9655f183700a548 104 SUPERFAMILY SSF103481 5 103 2.35E-19 T 12-10-2018 PA257_2020 6e6150c05bf67a22a9655f183700a548 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.4E-28 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 PA257_5421 73f7bff3da69e24613709d1d08657228 80 Gene3D G3DSA:1.10.10.10 1 80 2.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5421 73f7bff3da69e24613709d1d08657228 80 SUPERFAMILY SSF46785 1 72 1.02E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5421 73f7bff3da69e24613709d1d08657228 80 Pfam PF09012 FeoC like transcriptional regulator 3 67 4.4E-14 T 12-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC PA257_2109 37531d42b71f4556013fbdb561dcd929 310 SUPERFAMILY SSF161098 70 296 3.27E-49 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2109 37531d42b71f4556013fbdb561dcd929 310 Gene3D G3DSA:1.10.3720.10 66 306 2.8E-56 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2109 37531d42b71f4556013fbdb561dcd929 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 301 1.3E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_1177 e5f671c04fb7a7f68665fc231006ce3a 256 Pfam PF08543 Phosphomethylpyrimidine kinase 8 244 7.1E-70 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 PA257_1177 e5f671c04fb7a7f68665fc231006ce3a 256 SUPERFAMILY SSF53613 1 246 3.27E-60 T 12-10-2018 IPR029056 Ribokinase-like PA257_1177 e5f671c04fb7a7f68665fc231006ce3a 256 Gene3D G3DSA:3.40.1190.20 1 248 5.4E-74 T 12-10-2018 IPR029056 Ribokinase-like PA257_5876 f501e9026f41b2ded393179a36f62fca 47 SUPERFAMILY SSF47413 1 38 1.18E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_5876 f501e9026f41b2ded393179a36f62fca 47 Gene3D G3DSA:1.10.260.40 1 46 8.0E-12 T 12-10-2018 PA257_6477 e68310bc6b4672a049250915b0fef2e0 305 PIRSF PIRSF020481 5 304 1.4E-119 T 12-10-2018 IPR014507 Baseplate assembly protein J, predicted PA257_6477 e68310bc6b4672a049250915b0fef2e0 305 Pfam PF04865 Baseplate J-like protein 123 267 1.3E-22 T 12-10-2018 IPR006949 Baseplate protein J-like PA257_4107 3342686c1f583f3ceb8b88a08d607be9 289 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 61 270 5.9E-73 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU PA257_4107 3342686c1f583f3ceb8b88a08d607be9 289 Gene3D G3DSA:1.25.40.590 59 217 3.4E-52 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily PA257_4107 3342686c1f583f3ceb8b88a08d607be9 289 Pfam PF09850 Type VI secretion system protein DotU 62 264 1.8E-66 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU PA257_1564 94d89c7b2d7f9dda8fb9b688b18b02eb 261 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 44.358 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_1564 94d89c7b2d7f9dda8fb9b688b18b02eb 261 Gene3D G3DSA:3.90.230.10 1 259 3.5E-126 T 12-10-2018 PA257_1564 94d89c7b2d7f9dda8fb9b688b18b02eb 261 SUPERFAMILY SSF55920 4 254 1.44E-95 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like PA257_1564 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 2.9E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_1564 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 2.9E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_1564 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_1564 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 2.9E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_1564 94d89c7b2d7f9dda8fb9b688b18b02eb 261 Pfam PF00557 Metallopeptidase family M24 12 241 1.0E-59 T 12-10-2018 IPR000994 Peptidase M24 PA257_1564 94d89c7b2d7f9dda8fb9b688b18b02eb 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_1564 94d89c7b2d7f9dda8fb9b688b18b02eb 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 1.7E-105 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PA257_4806 4c9f52a20f7e1f6870fb6a00a7c12024 288 Gene3D G3DSA:3.10.129.10 5 158 3.4E-39 T 12-10-2018 PA257_4806 4c9f52a20f7e1f6870fb6a00a7c12024 288 SUPERFAMILY SSF54637 163 277 1.83E-27 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_4806 4c9f52a20f7e1f6870fb6a00a7c12024 288 Pfam PF01575 MaoC like domain 165 272 4.1E-26 T 12-10-2018 IPR002539 MaoC-like dehydratase domain PA257_4806 4c9f52a20f7e1f6870fb6a00a7c12024 288 SUPERFAMILY SSF54637 9 159 4.86E-37 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_4806 4c9f52a20f7e1f6870fb6a00a7c12024 288 Gene3D G3DSA:3.10.129.10 162 282 5.4E-38 T 12-10-2018 PA257_4806 4c9f52a20f7e1f6870fb6a00a7c12024 288 Pfam PF13452 N-terminal half of MaoC dehydratase 51 130 6.5E-8 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 PA257_6005 088e8ee9c8a606b15ed5bedbb7301775 119 Pfam PF08765 Mor transcription activator family 11 110 1.3E-15 T 12-10-2018 IPR014875 Mor transcription activator PA257_6005 088e8ee9c8a606b15ed5bedbb7301775 119 SUPERFAMILY SSF46689 14 106 1.52E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6005 088e8ee9c8a606b15ed5bedbb7301775 119 Gene3D G3DSA:1.10.10.60 63 115 1.6E-7 T 12-10-2018 PA257_1276 e4ba4d3af2b595a13c763b8ff12e7d7d 240 SUPERFAMILY SSF161098 37 221 4.32E-33 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1276 e4ba4d3af2b595a13c763b8ff12e7d7d 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 230 7.8E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_1276 e4ba4d3af2b595a13c763b8ff12e7d7d 240 Gene3D G3DSA:1.10.3720.10 38 232 3.7E-26 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3376 1c409c0b05e22759bcda9da13dac0260 356 Pfam PF00117 Glutamine amidotransferase class-I 31 215 6.6E-10 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_3376 1c409c0b05e22759bcda9da13dac0260 356 Pfam PF03992 Antibiotic biosynthesis monooxygenase 257 321 9.7E-8 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PA257_3376 1c409c0b05e22759bcda9da13dac0260 356 SUPERFAMILY SSF54909 245 344 6.26E-30 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_3376 1c409c0b05e22759bcda9da13dac0260 356 Gene3D G3DSA:3.30.70.100 246 338 2.6E-36 T 12-10-2018 PA257_3376 1c409c0b05e22759bcda9da13dac0260 356 SUPERFAMILY SSF52317 9 238 2.75E-43 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_3376 1c409c0b05e22759bcda9da13dac0260 356 Gene3D G3DSA:3.40.50.880 7 235 5.8E-45 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_3598 e8e229f9455f4659df64cc4ecb0fa177 285 SUPERFAMILY SSF141868 29 264 3.01E-39 T 12-10-2018 IPR035919 EAL domain superfamily PA257_3598 e8e229f9455f4659df64cc4ecb0fa177 285 SMART SM00052 22 264 5.9E-13 T 12-10-2018 IPR001633 EAL domain PA257_3598 e8e229f9455f4659df64cc4ecb0fa177 285 Pfam PF00563 EAL domain 28 259 6.7E-41 T 12-10-2018 IPR001633 EAL domain PA257_3598 e8e229f9455f4659df64cc4ecb0fa177 285 Gene3D G3DSA:3.20.20.450 22 268 2.3E-44 T 12-10-2018 IPR035919 EAL domain superfamily PA257_2932 828a72de93b4d9b6c49651aa56dd5585 418 Gene3D G3DSA:3.40.718.10 1 418 2.8E-186 T 12-10-2018 PA257_2932 828a72de93b4d9b6c49651aa56dd5585 418 SMART SM01329 30 414 1.7E-180 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PA257_2932 828a72de93b4d9b6c49651aa56dd5585 418 SUPERFAMILY SSF53659 4 418 2.11E-147 T 12-10-2018 PA257_2932 828a72de93b4d9b6c49651aa56dd5585 418 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 418 4.4E-225 T 12-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PA257_2932 828a72de93b4d9b6c49651aa56dd5585 418 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 413 9.4E-118 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PA257_2932 828a72de93b4d9b6c49651aa56dd5585 418 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 305 324 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 PA257_2187 54b9dc6345f00a3994205900f151ca29 171 Pfam PF02674 Colicin V production protein 2 135 1.9E-33 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PA257_5256 06f6fd08e009e295b8d8c587092b9d4e 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 54 1.0E-14 T 12-10-2018 IPR007746 Broad mercury transporter MerE GO:0015097|GO:0015694|GO:0016020 PA257_5256 06f6fd08e009e295b8d8c587092b9d4e 78 Pfam PF05052 MerE protein 1 74 9.3E-47 T 12-10-2018 IPR007746 Broad mercury transporter MerE GO:0015097|GO:0015694|GO:0016020 PA257_5588 324faa33a64ae57e8d87db95d883a5d1 600 Pfam PF00884 Sulfatase 239 529 3.0E-49 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PA257_5588 324faa33a64ae57e8d87db95d883a5d1 600 Pfam PF08019 Domain of unknown function (DUF1705) 55 178 3.9E-6 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 PA257_5588 324faa33a64ae57e8d87db95d883a5d1 600 Gene3D G3DSA:3.40.720.10 227 562 3.7E-71 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_5588 324faa33a64ae57e8d87db95d883a5d1 600 SUPERFAMILY SSF53649 237 533 1.68E-31 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_5099 72eea03dcfd362917cd1e9cd84319128 255 SMART SM00644 7 158 1.3E-46 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_5099 72eea03dcfd362917cd1e9cd84319128 255 SUPERFAMILY SSF47090 182 253 2.98E-18 T 12-10-2018 IPR036365 PGBD-like superfamily PA257_5099 72eea03dcfd362917cd1e9cd84319128 255 SUPERFAMILY SSF55846 10 174 1.57E-43 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_5099 72eea03dcfd362917cd1e9cd84319128 255 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 159 1.1E-24 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_5099 72eea03dcfd362917cd1e9cd84319128 255 Gene3D G3DSA:3.40.80.10 17 172 7.1E-51 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PA257_5099 72eea03dcfd362917cd1e9cd84319128 255 Gene3D G3DSA:1.10.101.10 173 255 3.4E-31 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PA257_4600 03994d4a51cd85208d822064037f968c 157 Pfam PF08982 Domain of unknown function (DUF1857) 16 147 1.6E-24 T 12-10-2018 IPR015075 Acetylaranotin biosynthesis cluster protein L PA257_4600 03994d4a51cd85208d822064037f968c 157 Gene3D G3DSA:3.30.530.20 1 157 1.1E-56 T 12-10-2018 IPR023393 START-like domain superfamily PA257_4600 03994d4a51cd85208d822064037f968c 157 SUPERFAMILY SSF55961 1 149 8.79E-43 T 12-10-2018 PA257_0751 b0e42e9ec29f0151a7ef2d2153b28b9f 344 Gene3D G3DSA:3.40.190.10 127 329 7.4E-114 T 12-10-2018 PA257_0751 b0e42e9ec29f0151a7ef2d2153b28b9f 344 Gene3D G3DSA:3.40.190.10 27 322 7.4E-114 T 12-10-2018 PA257_0751 b0e42e9ec29f0151a7ef2d2153b28b9f 344 SUPERFAMILY SSF53850 25 341 7.76E-65 T 12-10-2018 PA257_0751 b0e42e9ec29f0151a7ef2d2153b28b9f 344 Pfam PF13416 Bacterial extracellular solute-binding protein 43 308 3.6E-43 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_2958 82282a46042aba67f07c12969128fdf0 314 Gene3D G3DSA:3.40.190.10 30 300 1.4E-79 T 12-10-2018 PA257_2958 82282a46042aba67f07c12969128fdf0 314 Pfam PF09084 NMT1/THI5 like 66 242 3.3E-16 T 12-10-2018 IPR015168 SsuA/THI5-like PA257_2958 82282a46042aba67f07c12969128fdf0 314 SUPERFAMILY SSF53850 33 256 4.46E-42 T 12-10-2018 PA257_2958 82282a46042aba67f07c12969128fdf0 314 SMART SM00062 28 241 0.002 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_2958 82282a46042aba67f07c12969128fdf0 314 Gene3D G3DSA:3.40.190.10 105 204 1.4E-79 T 12-10-2018 PA257_2958 82282a46042aba67f07c12969128fdf0 314 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 30 309 6.6E-65 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 PA257_2510 ece14c2466a4333b3f8b50a1b783f198 460 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 44 452 4.3E-176 T 12-10-2018 IPR021204 Integrating conjugative element protein, PFL4711 PA257_2085 cebef28434b71fdc08e67f19af7865c1 343 Pfam PF02405 Permease MlaE 127 336 6.2E-67 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 PA257_2085 cebef28434b71fdc08e67f19af7865c1 343 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 102 338 1.2E-67 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PA257_1722 8d9edbeea53f262929ca66f4cc3f10a6 585 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 123 206 1.7E-32 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 PA257_1722 8d9edbeea53f262929ca66f4cc3f10a6 585 Pfam PF02378 Phosphotransferase system, EIIC 246 508 5.4E-18 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PA257_1722 8d9edbeea53f262929ca66f4cc3f10a6 585 SUPERFAMILY SSF52794 2 97 6.93E-24 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 PA257_1722 8d9edbeea53f262929ca66f4cc3f10a6 585 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 124 209 1.3E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PA257_1722 8d9edbeea53f262929ca66f4cc3f10a6 585 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.2E-10 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PA257_1722 8d9edbeea53f262929ca66f4cc3f10a6 585 Gene3D G3DSA:3.40.50.2300 1 102 1.9E-19 T 12-10-2018 PA257_1722 8d9edbeea53f262929ca66f4cc3f10a6 585 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 233 564 2.3E-133 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 PA257_1722 8d9edbeea53f262929ca66f4cc3f10a6 585 Gene3D G3DSA:3.40.50.2300 113 221 1.8E-36 T 12-10-2018 PA257_1722 8d9edbeea53f262929ca66f4cc3f10a6 585 SUPERFAMILY SSF52794 121 218 3.31E-34 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 PA257_0034 1e507efbc130cba71613f16c11e8074b 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 87 5.1E-24 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PA257_0034 1e507efbc130cba71613f16c11e8074b 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 271 5.8E-76 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PA257_0034 1e507efbc130cba71613f16c11e8074b 274 SUPERFAMILY SSF51735 101 270 1.21E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0034 1e507efbc130cba71613f16c11e8074b 274 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 165 4.0E-7 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PA257_0034 1e507efbc130cba71613f16c11e8074b 274 SUPERFAMILY SSF53223 1 100 1.09E-30 T 12-10-2018 PA257_0034 1e507efbc130cba71613f16c11e8074b 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 270 31.372 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PA257_0034 1e507efbc130cba71613f16c11e8074b 274 Gene3D G3DSA:3.40.50.720 115 237 2.5E-85 T 12-10-2018 PA257_0034 1e507efbc130cba71613f16c11e8074b 274 Gene3D G3DSA:3.40.50.10860 6 258 2.5E-85 T 12-10-2018 PA257_6190 11611269a66d2ea2454cdcafcd7dd9ee 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 117 402 1.6E-46 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PA257_6190 11611269a66d2ea2454cdcafcd7dd9ee 425 Pfam PF11862 Domain of unknown function (DUF3382) 13 109 5.4E-20 T 12-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal PA257_5551 51f0b155cae4137b9c7a89be536d4f91 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 2.4E-29 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PA257_5551 51f0b155cae4137b9c7a89be536d4f91 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.6E-17 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PA257_5551 51f0b155cae4137b9c7a89be536d4f91 95 Gene3D G3DSA:1.10.20.60 1 93 1.4E-23 T 12-10-2018 PA257_5551 51f0b155cae4137b9c7a89be536d4f91 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 24.079 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PA257_5551 51f0b155cae4137b9c7a89be536d4f91 95 SUPERFAMILY SSF141000 3 93 1.7E-28 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 PA257_5295 ba9204f6415529bc2f6ae20495bfe14f 300 SUPERFAMILY SSF53448 17 229 1.03E-56 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_5295 ba9204f6415529bc2f6ae20495bfe14f 300 Pfam PF00535 Glycosyl transferase family 2 20 179 2.7E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_5295 ba9204f6415529bc2f6ae20495bfe14f 300 Gene3D G3DSA:3.90.550.10 1 258 3.9E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_1184 6b6a39cfb0fddecc8913b53b17c66cf4 188 Pfam PF02810 SEC-C motif 166 181 1.1E-5 T 12-10-2018 IPR004027 SEC-C motif PA257_1184 6b6a39cfb0fddecc8913b53b17c66cf4 188 SUPERFAMILY SSF103642 165 182 2.78E-5 T 12-10-2018 PA257_6888 5cd641f8b01828b3a7b8dcb7073fad79 671 SUPERFAMILY SSF55073 516 669 3.69E-48 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_6888 5cd641f8b01828b3a7b8dcb7073fad79 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 511 667 1.9E-46 T 12-10-2018 IPR000160 GGDEF domain PA257_6888 5cd641f8b01828b3a7b8dcb7073fad79 671 Gene3D G3DSA:3.30.70.270 505 671 8.6E-58 T 12-10-2018 PA257_6888 5cd641f8b01828b3a7b8dcb7073fad79 671 SMART SM00267 501 671 2.5E-56 T 12-10-2018 IPR000160 GGDEF domain PA257_6888 5cd641f8b01828b3a7b8dcb7073fad79 671 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 670 1.8E-47 T 12-10-2018 IPR000160 GGDEF domain PA257_1033 36c510aff6d48141ff5522c2717c566c 189 Gene3D G3DSA:3.90.226.10 30 188 1.5E-5 T 12-10-2018 PA257_1033 36c510aff6d48141ff5522c2717c566c 189 SUPERFAMILY SSF52096 34 186 1.79E-10 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_4036 ce807ae9ec1139a0b45cd0042a5b3cf9 304 SUPERFAMILY SSF46785 3 85 1.65E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4036 ce807ae9ec1139a0b45cd0042a5b3cf9 304 Gene3D G3DSA:3.40.190.10 166 269 8.8E-52 T 12-10-2018 PA257_4036 ce807ae9ec1139a0b45cd0042a5b3cf9 304 SUPERFAMILY SSF53850 92 294 2.53E-36 T 12-10-2018 PA257_4036 ce807ae9ec1139a0b45cd0042a5b3cf9 304 Gene3D G3DSA:3.40.190.10 94 293 8.8E-52 T 12-10-2018 PA257_4036 ce807ae9ec1139a0b45cd0042a5b3cf9 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.2E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4036 ce807ae9ec1139a0b45cd0042a5b3cf9 304 Pfam PF03466 LysR substrate binding domain 90 294 3.9E-33 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4036 ce807ae9ec1139a0b45cd0042a5b3cf9 304 Gene3D G3DSA:1.10.10.10 5 90 6.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0571 86e0202b1318c986d058150c3bfa2056 730 Gene3D G3DSA:2.170.130.10 55 174 9.6E-22 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_0571 86e0202b1318c986d058150c3bfa2056 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 167 5.0E-19 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_0571 86e0202b1318c986d058150c3bfa2056 730 SUPERFAMILY SSF56935 30 730 6.91E-122 T 12-10-2018 PA257_0571 86e0202b1318c986d058150c3bfa2056 730 Pfam PF00593 TonB dependent receptor 268 728 1.5E-53 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_0571 86e0202b1318c986d058150c3bfa2056 730 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 713 730 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site PA257_0571 86e0202b1318c986d058150c3bfa2056 730 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 730 3.2E-72 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_0571 86e0202b1318c986d058150c3bfa2056 730 Gene3D G3DSA:2.40.170.20 181 730 3.0E-105 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_0211 319432a7ca7a6d397e0af3b323bc6b26 279 SUPERFAMILY SSF52540 14 253 7.4E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0211 319432a7ca7a6d397e0af3b323bc6b26 279 Pfam PF00005 ABC transporter 34 172 1.8E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_0211 319432a7ca7a6d397e0af3b323bc6b26 279 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0211 319432a7ca7a6d397e0af3b323bc6b26 279 Gene3D G3DSA:3.40.50.300 11 254 6.5E-65 T 12-10-2018 PA257_0211 319432a7ca7a6d397e0af3b323bc6b26 279 SMART SM00382 42 223 2.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0700 45d8f5d34dfce21394ad2d5527896cde 141 Pfam PF13474 SnoaL-like domain 8 129 3.7E-19 T 12-10-2018 IPR037401 SnoaL-like domain PA257_0700 45d8f5d34dfce21394ad2d5527896cde 141 SUPERFAMILY SSF54427 1 128 2.05E-31 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_0700 45d8f5d34dfce21394ad2d5527896cde 141 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 4 124 4.7E-9 T 12-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 PA257_0700 45d8f5d34dfce21394ad2d5527896cde 141 Gene3D G3DSA:3.10.450.50 2 141 1.2E-41 T 12-10-2018 PA257_4560 068dc3b13002d3354fd44c36e97e1424 265 Gene3D G3DSA:3.90.226.10 11 238 6.7E-79 T 12-10-2018 PA257_4560 068dc3b13002d3354fd44c36e97e1424 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 264 5.4E-34 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_4560 068dc3b13002d3354fd44c36e97e1424 265 SUPERFAMILY SSF52096 10 265 7.05E-61 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_3576 6fdc4d22d02137b789a89097c40c6427 664 Gene3D G3DSA:1.20.58.280 108 185 6.1E-44 T 12-10-2018 PA257_3576 6fdc4d22d02137b789a89097c40c6427 664 SMART SM00642 213 651 7.7E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_3576 6fdc4d22d02137b789a89097c40c6427 664 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 18 661 47.366 T 12-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 PA257_3576 6fdc4d22d02137b789a89097c40c6427 664 Gene3D G3DSA:2.60.40.10 21 197 6.1E-44 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3576 6fdc4d22d02137b789a89097c40c6427 664 Pfam PF11896 Domain of unknown function (DUF3416) 21 203 3.9E-46 T 12-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 PA257_3576 6fdc4d22d02137b789a89097c40c6427 664 Gene3D G3DSA:3.20.20.80 205 567 2.3E-161 T 12-10-2018 PA257_3576 6fdc4d22d02137b789a89097c40c6427 664 Gene3D G3DSA:2.60.40.1180 570 664 5.0E-22 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta PA257_3576 6fdc4d22d02137b789a89097c40c6427 664 SUPERFAMILY SSF51445 201 565 4.47E-89 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_3576 6fdc4d22d02137b789a89097c40c6427 664 Pfam PF00128 Alpha amylase, catalytic domain 227 332 4.2E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PA257_2539 5eb8a356ff80388917d3b6109498b84d 90 SUPERFAMILY SSF52540 1 83 5.88E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2539 5eb8a356ff80388917d3b6109498b84d 90 Gene3D G3DSA:3.40.50.300 1 90 8.6E-23 T 12-10-2018 PA257_3421 97799cf02b467cea4e418e5fe6dd7a77 325 SMART SM00342 239 321 4.9E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3421 97799cf02b467cea4e418e5fe6dd7a77 325 SUPERFAMILY SSF46689 275 324 4.48E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3421 97799cf02b467cea4e418e5fe6dd7a77 325 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 53 193 6.0E-10 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_3421 97799cf02b467cea4e418e5fe6dd7a77 325 Pfam PF12833 Helix-turn-helix domain 246 322 3.4E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3421 97799cf02b467cea4e418e5fe6dd7a77 325 Gene3D G3DSA:1.10.10.60 222 324 6.4E-19 T 12-10-2018 PA257_3290 84d4025f5b83ee4ab1b01e5397910e0d 376 Gene3D G3DSA:1.10.8.60 201 277 9.8E-24 T 12-10-2018 PA257_3290 84d4025f5b83ee4ab1b01e5397910e0d 376 Gene3D G3DSA:1.10.10.60 278 354 4.8E-6 T 12-10-2018 PA257_3290 84d4025f5b83ee4ab1b01e5397910e0d 376 SMART SM00382 49 192 6.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3290 84d4025f5b83ee4ab1b01e5397910e0d 376 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 115 130 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PA257_3290 84d4025f5b83ee4ab1b01e5397910e0d 376 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 53 66 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PA257_3290 84d4025f5b83ee4ab1b01e5397910e0d 376 Gene3D G3DSA:3.40.50.300 19 200 1.1E-63 T 12-10-2018 PA257_3290 84d4025f5b83ee4ab1b01e5397910e0d 376 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 242 251 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PA257_3290 84d4025f5b83ee4ab1b01e5397910e0d 376 SUPERFAMILY SSF46689 242 350 6.27E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3290 84d4025f5b83ee4ab1b01e5397910e0d 376 Pfam PF00158 Sigma-54 interaction domain 32 195 2.0E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PA257_3290 84d4025f5b83ee4ab1b01e5397910e0d 376 SUPERFAMILY SSF52540 33 270 2.95E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1182 e2fd6cb49cc87b81d835b46a398a70ef 491 Hamap MF_01932 AMP nucleosidase [amn]. 8 491 59.128 T 12-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PA257_1182 e2fd6cb49cc87b81d835b46a398a70ef 491 Gene3D G3DSA:3.30.1730.10 10 177 1.3E-53 T 12-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PA257_1182 e2fd6cb49cc87b81d835b46a398a70ef 491 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 16 491 2.1E-251 T 12-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PA257_1182 e2fd6cb49cc87b81d835b46a398a70ef 491 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 17 171 5.4E-50 T 12-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PA257_1182 e2fd6cb49cc87b81d835b46a398a70ef 491 Gene3D G3DSA:3.40.50.1580 179 491 6.3E-103 T 12-10-2018 PA257_1182 e2fd6cb49cc87b81d835b46a398a70ef 491 Pfam PF01048 Phosphorylase superfamily 276 460 2.1E-16 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PA257_1182 e2fd6cb49cc87b81d835b46a398a70ef 491 SUPERFAMILY SSF53167 14 491 1.31E-143 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 PA257_1942 12c7720a30e28de54656955779d0fb81 79 Pfam PF00550 Phosphopantetheine attachment site 9 72 1.1E-7 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_1942 12c7720a30e28de54656955779d0fb81 79 Gene3D G3DSA:1.10.1200.10 1 79 1.4E-18 T 12-10-2018 IPR036736 ACP-like superfamily PA257_1942 12c7720a30e28de54656955779d0fb81 79 SUPERFAMILY SSF47336 3 77 3.01E-13 T 12-10-2018 IPR036736 ACP-like superfamily PA257_0277 c0d6c5481cb24099de3640e5dd9397ce 148 Gene3D G3DSA:3.40.630.30 6 147 4.1E-34 T 12-10-2018 PA257_0277 c0d6c5481cb24099de3640e5dd9397ce 148 Pfam PF13508 Acetyltransferase (GNAT) domain 53 126 3.7E-15 T 12-10-2018 IPR000182 GNAT domain PA257_0277 c0d6c5481cb24099de3640e5dd9397ce 148 SUPERFAMILY SSF55729 5 145 9.22E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_2503 0a3cf74f9aefc69b8ef1872d900c28f1 289 SUPERFAMILY SSF53098 114 278 1.52E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_2503 0a3cf74f9aefc69b8ef1872d900c28f1 289 Pfam PF13276 HTH-like domain 41 96 8.3E-16 T 12-10-2018 IPR025948 HTH-like domain PA257_2503 0a3cf74f9aefc69b8ef1872d900c28f1 289 Pfam PF00665 Integrase core domain 122 235 2.7E-26 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_2503 0a3cf74f9aefc69b8ef1872d900c28f1 289 Gene3D G3DSA:3.30.420.10 118 280 1.6E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_4312 d8335eae6a5b25b9dd8917baffb14414 155 Gene3D G3DSA:1.10.8.640 17 100 4.2E-38 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily PA257_4312 d8335eae6a5b25b9dd8917baffb14414 155 Pfam PF03918 Cytochrome C biogenesis protein 9 151 9.8E-57 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family PA257_4067 fdf3a1ad29a047bbb228b97586506408 168 PIRSF PIRSF003165 1 162 6.9E-59 T 12-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup PA257_4067 fdf3a1ad29a047bbb228b97586506408 168 SUPERFAMILY SSF48452 30 135 1.29E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4067 fdf3a1ad29a047bbb228b97586506408 168 Gene3D G3DSA:1.25.40.10 21 161 2.7E-57 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4067 fdf3a1ad29a047bbb228b97586506408 168 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 154 5.8E-43 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD PA257_4067 fdf3a1ad29a047bbb228b97586506408 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 48 67 7.0E-48 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD PA257_4067 fdf3a1ad29a047bbb228b97586506408 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 23 46 7.0E-48 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD PA257_4067 fdf3a1ad29a047bbb228b97586506408 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 104 126 7.0E-48 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD PA257_4067 fdf3a1ad29a047bbb228b97586506408 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 72 94 7.0E-48 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD PA257_0943 7650e036f9f5caf0eb2cc32f3f388a5c 339 Pfam PF02779 Transketolase, pyrimidine binding domain 4 189 5.6E-56 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_0943 7650e036f9f5caf0eb2cc32f3f388a5c 339 Gene3D G3DSA:3.40.50.920 202 335 5.8E-47 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_0943 7650e036f9f5caf0eb2cc32f3f388a5c 339 Gene3D G3DSA:3.40.50.970 3 201 7.8E-83 T 12-10-2018 PA257_0943 7650e036f9f5caf0eb2cc32f3f388a5c 339 SMART SM00861 5 189 1.5E-58 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PA257_0943 7650e036f9f5caf0eb2cc32f3f388a5c 339 SUPERFAMILY SSF52518 3 213 6.87E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_0943 7650e036f9f5caf0eb2cc32f3f388a5c 339 Pfam PF02780 Transketolase, C-terminal domain 203 325 7.1E-44 T 12-10-2018 IPR033248 Transketolase, C-terminal domain PA257_0943 7650e036f9f5caf0eb2cc32f3f388a5c 339 SUPERFAMILY SSF52922 198 333 6.02E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PA257_4119 b496d40ebdce93a2d6459165189e488d 518 Pfam PF06812 ImpA, N-terminal, type VI secretion system 17 127 8.5E-30 T 12-10-2018 IPR010657 ImpA, N-terminal PA257_4119 b496d40ebdce93a2d6459165189e488d 518 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 225 483 2.5E-77 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 PA257_4119 b496d40ebdce93a2d6459165189e488d 518 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 12 484 1.7E-134 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 PA257_4586 7ddabb9283bf9e35e34e456ce77030af 420 Gene3D G3DSA:3.30.559.10 95 236 3.6E-6 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_4586 7ddabb9283bf9e35e34e456ce77030af 420 SUPERFAMILY SSF52777 50 207 9.12E-8 T 12-10-2018 PA257_2245 2b3640106cc89ab63832f7a21e636dde 634 Pfam PF00246 Zinc carboxypeptidase 86 272 2.5E-17 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PA257_2245 2b3640106cc89ab63832f7a21e636dde 634 SUPERFAMILY SSF53187 76 348 7.61E-39 T 12-10-2018 PA257_2245 2b3640106cc89ab63832f7a21e636dde 634 Gene3D G3DSA:3.40.630.10 68 364 2.9E-28 T 12-10-2018 PA257_1741 a72176d4adce9fd48f50e48c31eb2d7f 389 Pfam PF07238 PilZ domain 16 115 2.1E-11 T 12-10-2018 IPR009875 PilZ domain GO:0035438 PA257_1741 a72176d4adce9fd48f50e48c31eb2d7f 389 Gene3D G3DSA:2.40.50.100 262 292 2.7E-7 T 12-10-2018 PA257_1741 a72176d4adce9fd48f50e48c31eb2d7f 389 Gene3D G3DSA:2.40.10.220 14 124 1.2E-44 T 12-10-2018 PA257_1741 a72176d4adce9fd48f50e48c31eb2d7f 389 Gene3D G3DSA:2.40.30.170 293 371 2.7E-7 T 12-10-2018 PA257_1741 a72176d4adce9fd48f50e48c31eb2d7f 389 SUPERFAMILY SSF141371 10 124 2.35E-10 T 12-10-2018 PA257_1741 a72176d4adce9fd48f50e48c31eb2d7f 389 Pfam PF13437 HlyD family secretion protein 262 357 2.5E-10 T 12-10-2018 PA257_5266 547a3d52f4cb279fb87faa2031abb1a1 707 Pfam PF07510 Protein of unknown function (DUF1524) 414 556 3.6E-25 T 12-10-2018 IPR011089 Domain of unknown function DUF1524 PA257_5266 547a3d52f4cb279fb87faa2031abb1a1 707 Pfam PF03235 Protein of unknown function DUF262 10 225 2.8E-35 T 12-10-2018 IPR004919 Domain of unknown function DUF262 PA257_0965 4f87b0a55f8b3356b9052c454afb6f74 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 463 6.5E-219 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PA257_0965 4f87b0a55f8b3356b9052c454afb6f74 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0965 4f87b0a55f8b3356b9052c454afb6f74 475 SUPERFAMILY SSF81442 10 466 2.62E-119 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0965 4f87b0a55f8b3356b9052c454afb6f74 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 442 1.2E-106 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0965 4f87b0a55f8b3356b9052c454afb6f74 475 Gene3D G3DSA:1.20.210.10 2 475 7.1E-205 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 Pfam PF14849 YidC periplasmic domain 208 380 4.5E-53 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 Pfam PF14849 YidC periplasmic domain 82 190 2.0E-24 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 571 24.56 T 12-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 Gene3D G3DSA:2.70.98.90 78 191 4.7E-34 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 Gene3D G3DSA:2.70.98.90 192 370 4.0E-58 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 Pfam PF02096 60Kd inner membrane protein 391 569 2.2E-61 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 255 273 6.3E-76 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.3E-76 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 452 475 6.3E-76 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 288 303 6.3E-76 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 535 558 6.3E-76 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 361 381 6.3E-76 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 499 521 6.3E-76 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 190 6.9E-42 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 208 389 1.0E-62 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 390 569 2.6E-72 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR01900 YidC translocation/secretion protein signature 505 520 7.2E-27 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR01900 YidC translocation/secretion protein signature 376 392 7.2E-27 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_6974 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR01900 YidC translocation/secretion protein signature 524 548 7.2E-27 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 PRINTS PR00139 Asparaginase/glutaminase family signature 105 123 2.1E-21 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 PRINTS PR00139 Asparaginase/glutaminase family signature 283 301 2.1E-21 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 PRINTS PR00139 Asparaginase/glutaminase family signature 25 36 2.1E-21 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 SMART SM00870 24 344 3.1E-125 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 PIRSF PIRSF500176 21 350 1.7E-77 T 12-10-2018 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 SUPERFAMILY SSF53774 22 349 1.18E-95 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 106 116 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 Gene3D G3DSA:3.40.50.40 236 350 1.6E-34 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 Gene3D G3DSA:3.40.50.1170 22 235 1.2E-82 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 Pfam PF00710 Asparaginase, N-terminal 24 215 9.1E-54 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 13 350 1.4E-113 T 12-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 27 35 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 PA257_4456 a9b99e3e9cd452f50be774971e8a2443 350 PIRSF PIRSF001220 19 350 8.9E-86 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 364 388 - T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 32 547 2.5E-155 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 Pfam PF01019 Gamma-glutamyltranspeptidase 45 550 2.2E-175 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 Gene3D G3DSA:3.60.20.40 366 549 2.2E-64 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 444 2.8E-73 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 364 382 2.8E-73 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 406 2.8E-73 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 285 2.8E-73 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 236 252 2.8E-73 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 453 470 2.8E-73 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 142 2.8E-73 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 52 77 2.8E-73 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 142 161 2.8E-73 T 12-10-2018 PA257_4455 aa8506187d1328df841a20f44c34cb03 557 SUPERFAMILY SSF56235 26 553 9.07E-172 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_4455 aa8506187d1328df841a20f44c34cb03 557 Gene3D G3DSA:1.10.246.130 252 365 4.6E-33 T 12-10-2018 PA257_5651 d174527f96c5c4203df2c081022fdda1 359 Gene3D G3DSA:1.20.81.30 216 322 1.6E-7 T 12-10-2018 PA257_5651 d174527f96c5c4203df2c081022fdda1 359 Pfam PF00482 Type II secretion system (T2SS), protein F 227 348 2.5E-14 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_5651 d174527f96c5c4203df2c081022fdda1 359 Pfam PF00482 Type II secretion system (T2SS), protein F 25 151 1.0E-16 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_5651 d174527f96c5c4203df2c081022fdda1 359 Gene3D G3DSA:1.20.81.30 11 132 1.7E-23 T 12-10-2018 PA257_4424 af3e05af603cf78c42eb5756079cf3d1 97 Pfam PF00583 Acetyltransferase (GNAT) family 9 85 3.7E-12 T 12-10-2018 IPR000182 GNAT domain PA257_4424 af3e05af603cf78c42eb5756079cf3d1 97 Gene3D G3DSA:3.40.630.30 2 96 2.1E-21 T 12-10-2018 PA257_4424 af3e05af603cf78c42eb5756079cf3d1 97 SUPERFAMILY SSF55729 2 90 1.1E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6259 687ce0a6529a4a7016b8b6157cb5e18d 482 SUPERFAMILY SSF56954 32 451 5.23E-91 T 12-10-2018 PA257_6259 687ce0a6529a4a7016b8b6157cb5e18d 482 Gene3D G3DSA:1.20.1600.10 30 458 1.8E-113 T 12-10-2018 PA257_6259 687ce0a6529a4a7016b8b6157cb5e18d 482 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 29 452 1.2E-142 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 PA257_6259 687ce0a6529a4a7016b8b6157cb5e18d 482 Pfam PF02321 Outer membrane efflux protein 244 437 1.8E-30 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_6259 687ce0a6529a4a7016b8b6157cb5e18d 482 Pfam PF02321 Outer membrane efflux protein 36 217 2.5E-24 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_0979 0e2400ff0d31ed61f031a21fd86e4542 303 SMART SM00342 210 293 3.9E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0979 0e2400ff0d31ed61f031a21fd86e4542 303 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 7 295 2.0E-145 T 12-10-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA PA257_0979 0e2400ff0d31ed61f031a21fd86e4542 303 SUPERFAMILY SSF51182 38 120 2.13E-10 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_0979 0e2400ff0d31ed61f031a21fd86e4542 303 Gene3D G3DSA:1.10.10.60 191 302 1.7E-22 T 12-10-2018 PA257_0979 0e2400ff0d31ed61f031a21fd86e4542 303 Pfam PF12833 Helix-turn-helix domain 216 295 1.3E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0979 0e2400ff0d31ed61f031a21fd86e4542 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 277 6.2E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_0979 0e2400ff0d31ed61f031a21fd86e4542 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 293 6.2E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_0979 0e2400ff0d31ed61f031a21fd86e4542 303 Pfam PF02311 AraC-like ligand binding domain 32 165 2.0E-14 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_0979 0e2400ff0d31ed61f031a21fd86e4542 303 Gene3D G3DSA:2.60.120.10 37 107 2.0E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_0979 0e2400ff0d31ed61f031a21fd86e4542 303 SUPERFAMILY SSF46689 248 295 7.62E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4506 c0f7a9c1876953dc22e356fc7546d623 284 SMART SM00450 158 278 6.1E-11 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_4506 c0f7a9c1876953dc22e356fc7546d623 284 SMART SM00450 7 135 4.3E-17 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_4506 c0f7a9c1876953dc22e356fc7546d623 284 SUPERFAMILY SSF52821 162 283 2.23E-32 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_4506 c0f7a9c1876953dc22e356fc7546d623 284 SUPERFAMILY SSF52821 2 156 1.44E-38 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_4506 c0f7a9c1876953dc22e356fc7546d623 284 Gene3D G3DSA:3.40.250.10 1 151 4.0E-43 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_4506 c0f7a9c1876953dc22e356fc7546d623 284 Gene3D G3DSA:3.40.250.10 152 284 1.7E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_4506 c0f7a9c1876953dc22e356fc7546d623 284 Pfam PF00581 Rhodanese-like domain 160 273 3.1E-11 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_4506 c0f7a9c1876953dc22e356fc7546d623 284 Pfam PF00581 Rhodanese-like domain 8 132 1.1E-15 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_0949 a227be4fd458da6209681f511865cd2a 203 Pfam PF01810 LysE type translocator 14 195 1.5E-16 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_4754 203bec700d03d3030f243532ca0b142a 304 Pfam PF03466 LysR substrate binding domain 88 292 2.0E-39 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4754 203bec700d03d3030f243532ca0b142a 304 Gene3D G3DSA:3.40.190.290 92 292 1.5E-57 T 12-10-2018 PA257_4754 203bec700d03d3030f243532ca0b142a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.0E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4754 203bec700d03d3030f243532ca0b142a 304 SUPERFAMILY SSF53850 91 295 9.59E-40 T 12-10-2018 PA257_4754 203bec700d03d3030f243532ca0b142a 304 Gene3D G3DSA:1.10.10.10 2 91 6.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4754 203bec700d03d3030f243532ca0b142a 304 SUPERFAMILY SSF46785 3 87 6.99E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6602 5d61aaac7cc3d44d4b21f3d9169db436 652 Pfam PF03239 Iron permease FTR1 family 361 494 3.0E-12 T 12-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 PA257_6602 5d61aaac7cc3d44d4b21f3d9169db436 652 Gene3D G3DSA:1.10.760.10 122 240 1.5E-16 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6602 5d61aaac7cc3d44d4b21f3d9169db436 652 SUPERFAMILY SSF46626 138 242 3.73E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6602 5d61aaac7cc3d44d4b21f3d9169db436 652 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 149 232 1.4E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_1054 8c3eda229ff97ac39fb8224e64ff259f 138 Pfam PF03061 Thioesterase superfamily 45 121 8.7E-13 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_1054 8c3eda229ff97ac39fb8224e64ff259f 138 Gene3D G3DSA:3.10.129.10 4 136 1.2E-50 T 12-10-2018 PA257_1054 8c3eda229ff97ac39fb8224e64ff259f 138 SUPERFAMILY SSF54637 7 132 6.08E-22 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_5589 49c16bfeeb0f9f8e8860af37a24a7f2b 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.2E-6 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_5589 49c16bfeeb0f9f8e8860af37a24a7f2b 141 Gene3D G3DSA:3.10.180.10 4 141 3.8E-51 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_5589 49c16bfeeb0f9f8e8860af37a24a7f2b 141 SUPERFAMILY SSF54593 4 134 2.2E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_5269 4caaeb8bfb330ac2d4b1e9a52998a75d 302 Pfam PF13280 WYL domain 122 193 3.8E-10 T 12-10-2018 IPR026881 WYL domain PA257_5269 4caaeb8bfb330ac2d4b1e9a52998a75d 302 PIRSF PIRSF015558 2 289 3.4E-84 T 12-10-2018 IPR016634 WYL domain protein, s026 type PA257_1857 5d90c79ec5695efc93786c13eba5e679 132 Pfam PF10990 Protein of unknown function (DUF2809) 40 122 5.0E-18 T 12-10-2018 IPR021257 Protein of unknown function DUF2809 PA257_2200 354c71260671ac2ff87c17d4ad64836f 382 Gene3D G3DSA:3.30.1360.100 297 382 1.9E-16 T 12-10-2018 PA257_2200 354c71260671ac2ff87c17d4ad64836f 382 SUPERFAMILY SSF53067 6 139 5.31E-26 T 12-10-2018 PA257_2200 354c71260671ac2ff87c17d4ad64836f 382 PIRSF PIRSF015761 37 382 4.2E-49 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 PA257_2200 354c71260671ac2ff87c17d4ad64836f 382 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 7 381 5.4E-107 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 PA257_2200 354c71260671ac2ff87c17d4ad64836f 382 Gene3D G3DSA:3.30.420.380 17 161 6.5E-23 T 12-10-2018 PA257_2200 354c71260671ac2ff87c17d4ad64836f 382 Pfam PF12693 GspL periplasmic domain 226 381 8.9E-46 T 12-10-2018 IPR025691 GspL periplasmic domain PA257_2200 354c71260671ac2ff87c17d4ad64836f 382 Pfam PF05134 Type II secretion system (T2SS), protein L 7 222 6.4E-57 T 12-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain PA257_3817 291f4b8ce1dbdcf731cb84d49242bc6a 158 Pfam PF01618 MotA/TolQ/ExbB proton channel family 72 138 1.9E-6 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel PA257_1587 c81cbaed0ca34733f9baac241f94407b 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 94 32.351 T 12-10-2018 IPR023081 Cell division protein FtsB PA257_1587 c81cbaed0ca34733f9baac241f94407b 94 Pfam PF04977 Septum formation initiator 17 92 2.7E-23 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC PA257_6032 18f9f1b2ba022537dbed185fd2c74e21 567 PIRSF PIRSF007056 20 556 8.4E-228 T 12-10-2018 IPR012036 Bacteriophage Mu, Gp28 PA257_6032 18f9f1b2ba022537dbed185fd2c74e21 567 Gene3D G3DSA:3.30.420.240 339 520 5.8E-6 T 12-10-2018 PA257_6032 18f9f1b2ba022537dbed185fd2c74e21 567 Gene3D G3DSA:3.40.50.300 47 234 1.5E-30 T 12-10-2018 PA257_0023 8c4e08e4d90ebb9e7b69aa62af7b74a3 217 Hamap MF_02088 Probable queuosine precursor transporter. 12 217 15.225 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 PA257_0023 8c4e08e4d90ebb9e7b69aa62af7b74a3 217 Pfam PF02592 Putative vitamin uptake transporter 43 199 2.9E-35 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 PA257_0023 8c4e08e4d90ebb9e7b69aa62af7b74a3 217 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 14 202 8.2E-56 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 PA257_3713 94169d37a4de38b01b4a1bea982e5731 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 7.1E-8 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_3713 94169d37a4de38b01b4a1bea982e5731 140 Gene3D G3DSA:3.10.180.10 5 134 6.6E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_3713 94169d37a4de38b01b4a1bea982e5731 140 SUPERFAMILY SSF54593 5 132 5.24E-26 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_6387 9798680f50dbc5f7a0fde41dec0eccb6 322 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 301 4.0E-66 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PA257_6387 9798680f50dbc5f7a0fde41dec0eccb6 322 SUPERFAMILY SSF53850 28 317 1.56E-74 T 12-10-2018 PA257_6387 9798680f50dbc5f7a0fde41dec0eccb6 322 Gene3D G3DSA:3.40.190.100 116 243 7.5E-42 T 12-10-2018 PA257_6387 9798680f50dbc5f7a0fde41dec0eccb6 322 Gene3D G3DSA:3.40.190.10 35 310 7.5E-42 T 12-10-2018 PA257_3589 ef2222cf91238ed7b0b57ef0b2a36f31 172 Gene3D G3DSA:3.90.950.20 3 166 9.4E-42 T 12-10-2018 IPR036653 CinA-like, C-terminal PA257_3589 ef2222cf91238ed7b0b57ef0b2a36f31 172 SUPERFAMILY SSF142433 5 163 9.94E-40 T 12-10-2018 IPR036653 CinA-like, C-terminal PA257_3589 ef2222cf91238ed7b0b57ef0b2a36f31 172 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 2.1E-24 T 12-10-2018 IPR008136 CinA, C-terminal PA257_3589 ef2222cf91238ed7b0b57ef0b2a36f31 172 Pfam PF02464 Competence-damaged protein 10 159 6.2E-36 T 12-10-2018 IPR008136 CinA, C-terminal PA257_0852 23900d192c3f73be4d006010650338a6 442 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 428 29.003 T 12-10-2018 IPR026593 Protein translocase subunit SecY PA257_0852 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 5.5E-90 T 12-10-2018 PA257_0852 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 5.5E-90 T 12-10-2018 PA257_0852 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 5.5E-90 T 12-10-2018 PA257_0852 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 5.5E-90 T 12-10-2018 PA257_0852 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 5.5E-90 T 12-10-2018 PA257_0852 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 5.5E-90 T 12-10-2018 PA257_0852 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 5.5E-90 T 12-10-2018 PA257_0852 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 5.5E-90 T 12-10-2018 PA257_0852 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 5.5E-90 T 12-10-2018 PA257_0852 23900d192c3f73be4d006010650338a6 442 PIRSF PIRSF004557 8 436 3.8E-119 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PA257_0852 23900d192c3f73be4d006010650338a6 442 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 424 7.8E-130 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PA257_0852 23900d192c3f73be4d006010650338a6 442 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PA257_0852 23900d192c3f73be4d006010650338a6 442 Gene3D G3DSA:1.10.3370.10 10 424 3.2E-158 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PA257_0852 23900d192c3f73be4d006010650338a6 442 SUPERFAMILY SSF103491 15 419 1.44E-128 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PA257_0852 23900d192c3f73be4d006010650338a6 442 Pfam PF00344 SecY translocase 75 412 1.1E-115 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PA257_6863 35d16456cca63b5a16e2060c2c15a56f 111 Pfam PF09498 Protein of unknown function (DUF2388) 41 110 3.1E-31 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_6863 35d16456cca63b5a16e2060c2c15a56f 111 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 6 110 7.2E-40 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_4058 ad7585a900676877851904771c7c91a3 140 Gene3D G3DSA:3.30.1460.10 1 126 1.5E-51 T 12-10-2018 PA257_4058 ad7585a900676877851904771c7c91a3 140 SUPERFAMILY SSF69635 2 126 5.65E-42 T 12-10-2018 PA257_4058 ad7585a900676877851904771c7c91a3 140 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 2 140 2.7E-58 T 12-10-2018 IPR013353 Type III secretion system chaperone YscB PA257_4058 ad7585a900676877851904771c7c91a3 140 Pfam PF05932 Tir chaperone protein (CesT) family 3 120 1.4E-28 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 2.6E-8 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 102 110 2.6E-8 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 136 2.6E-8 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 2.6E-8 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 Gene3D G3DSA:3.50.50.60 3 287 1.9E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.5E-12 T 12-10-2018 PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 268 3.5E-12 T 12-10-2018 PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 3.5E-12 T 12-10-2018 PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 Gene3D G3DSA:3.50.50.60 115 222 1.9E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 SUPERFAMILY SSF51905 1 291 4.83E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 SUPERFAMILY SSF51905 114 214 2.41E-5 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0923 5c66099a5aefdc6ff9b001bde1bb0ee1 295 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 271 4.4E-18 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_2675 937d5361786290e99e0924d5799723ca 99 Pfam PF07238 PilZ domain 10 95 3.2E-13 T 12-10-2018 IPR009875 PilZ domain GO:0035438 PA257_2675 937d5361786290e99e0924d5799723ca 99 Gene3D G3DSA:2.40.10.220 4 99 1.0E-12 T 12-10-2018 PA257_2675 937d5361786290e99e0924d5799723ca 99 SUPERFAMILY SSF141371 6 94 2.35E-16 T 12-10-2018 PA257_1337 69bc00c6cc19238850b1b5eecf920db8 307 Gene3D G3DSA:3.40.50.1820 8 276 1.0E-80 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1337 69bc00c6cc19238850b1b5eecf920db8 307 Gene3D G3DSA:1.10.10.800 138 223 1.0E-80 T 12-10-2018 PA257_1337 69bc00c6cc19238850b1b5eecf920db8 307 SUPERFAMILY SSF53474 5 296 3.71E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1337 69bc00c6cc19238850b1b5eecf920db8 307 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 12 160 1.3E-14 T 12-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 PA257_5386 b5135391a2558f535146ab51707128de 335 SMART SM00382 53 194 3.4E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5386 b5135391a2558f535146ab51707128de 335 Gene3D G3DSA:1.10.8.300 222 330 2.3E-29 T 12-10-2018 PA257_5386 b5135391a2558f535146ab51707128de 335 SUPERFAMILY SSF52540 24 307 1.51E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5386 b5135391a2558f535146ab51707128de 335 PIRSF PIRSF002849 1 335 1.2E-129 T 12-10-2018 PA257_5386 b5135391a2558f535146ab51707128de 335 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 56 186 8.7E-64 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PA257_5386 b5135391a2558f535146ab51707128de 335 Gene3D G3DSA:3.40.50.300 16 219 1.1E-50 T 12-10-2018 PA257_6877 53a1f71169181c210ce9139daa41b5d9 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 288 305 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_6877 53a1f71169181c210ce9139daa41b5d9 429 Pfam PF07690 Major Facilitator Superfamily 16 370 7.5E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6877 53a1f71169181c210ce9139daa41b5d9 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_6877 53a1f71169181c210ce9139daa41b5d9 429 Gene3D G3DSA:1.20.1250.20 9 428 1.4E-60 T 12-10-2018 PA257_6877 53a1f71169181c210ce9139daa41b5d9 429 SUPERFAMILY SSF103473 8 420 1.83E-64 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6332 f59ec9c3fe4feec4bea2083633971b3a 165 Pfam PF04351 Pilus assembly protein, PilP 17 161 5.4E-50 T 12-10-2018 IPR007446 Pilus assembly protein PilP PA257_6332 f59ec9c3fe4feec4bea2083633971b3a 165 PIRSF PIRSF016481 1 165 1.3E-70 T 12-10-2018 IPR007446 Pilus assembly protein PilP PA257_6332 f59ec9c3fe4feec4bea2083633971b3a 165 Gene3D G3DSA:2.30.30.830 70 162 1.5E-33 T 12-10-2018 PA257_4075 1a924afcd5c68606b8b171de65b5d7b5 92 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 87 5.0E-44 T 12-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA PA257_4075 1a924afcd5c68606b8b171de65b5d7b5 92 SUPERFAMILY SSF140591 2 90 3.73E-29 T 12-10-2018 PA257_4075 1a924afcd5c68606b8b171de65b5d7b5 92 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 4 84 3.1E-21 T 12-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related PA257_4075 1a924afcd5c68606b8b171de65b5d7b5 92 Gene3D G3DSA:1.20.1280.80 1 91 3.9E-31 T 12-10-2018 IPR038347 TyeA superfamily PA257_4075 1a924afcd5c68606b8b171de65b5d7b5 92 Pfam PF09059 TyeA 6 86 2.7E-32 T 12-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA PA257_2377 c8749329022a3f10ca8c0f54fc3261e9 369 SUPERFAMILY SSF51395 3 365 3.67E-130 T 12-10-2018 PA257_2377 c8749329022a3f10ca8c0f54fc3261e9 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 341 3.4E-94 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PA257_2377 c8749329022a3f10ca8c0f54fc3261e9 369 Gene3D G3DSA:3.20.20.70 3 368 7.4E-145 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_3728 38dc09edee3601b6fd4cdff8a45d8cfa 300 SUPERFAMILY SSF51569 1 289 8.61E-73 T 12-10-2018 PA257_3728 38dc09edee3601b6fd4cdff8a45d8cfa 300 Pfam PF00682 HMGL-like 6 278 3.7E-53 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PA257_3728 38dc09edee3601b6fd4cdff8a45d8cfa 300 Gene3D G3DSA:3.20.20.70 1 300 1.4E-142 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_3728 38dc09edee3601b6fd4cdff8a45d8cfa 300 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 12-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 PA257_2955 e2249aa20faee934e5bfedcfeef79ab4 201 Gene3D G3DSA:2.60.120.10 46 188 2.5E-62 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_2955 e2249aa20faee934e5bfedcfeef79ab4 201 SUPERFAMILY SSF51182 9 196 7.97E-55 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_2955 e2249aa20faee934e5bfedcfeef79ab4 201 Gene3D G3DSA:1.20.5.440 1 45 8.2E-26 T 12-10-2018 PA257_2955 e2249aa20faee934e5bfedcfeef79ab4 201 Pfam PF05995 Cysteine dioxygenase type I 45 160 6.4E-8 T 12-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 PA257_4080 addfa5526c77447e70ced1291d4761e5 309 Gene3D G3DSA:2.30.330.10 220 307 7.1E-27 T 12-10-2018 IPR036429 SpoA-like superfamily PA257_4080 addfa5526c77447e70ced1291d4761e5 309 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 234 303 2.2E-16 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) PA257_4080 addfa5526c77447e70ced1291d4761e5 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 236 248 3.9E-8 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 PA257_4080 addfa5526c77447e70ced1291d4761e5 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 280 297 3.9E-8 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 PA257_4080 addfa5526c77447e70ced1291d4761e5 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 175 185 3.9E-8 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 PA257_4080 addfa5526c77447e70ced1291d4761e5 309 SUPERFAMILY SSF101801 231 308 1.27E-18 T 12-10-2018 IPR036429 SpoA-like superfamily PA257_4080 addfa5526c77447e70ced1291d4761e5 309 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 40 303 7.1E-65 T 12-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 PA257_0891 065eafd9f15f218b5788e01cd02a4a0d 148 Pfam PF07681 DoxX 15 95 2.6E-15 T 12-10-2018 IPR032808 DoxX family PA257_5533 22d0913c307e340da25028e7b7738e13 286 Gene3D G3DSA:3.40.50.300 36 158 1.8E-6 T 12-10-2018 PA257_5533 22d0913c307e340da25028e7b7738e13 286 Pfam PF03668 P-loop ATPase protein family 1 285 9.3E-95 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 PA257_5533 22d0913c307e340da25028e7b7738e13 286 PIRSF PIRSF005052 1 286 2.0E-114 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 PA257_5533 22d0913c307e340da25028e7b7738e13 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 286 40.437 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 PA257_5533 22d0913c307e340da25028e7b7738e13 286 SUPERFAMILY SSF52540 1 154 1.88E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1770 619bb603c8d275e187d32b7d42d3e8ab 357 Pfam PF13847 Methyltransferase domain 176 334 1.4E-21 T 12-10-2018 IPR025714 Methyltransferase domain PA257_1770 619bb603c8d275e187d32b7d42d3e8ab 357 Gene3D G3DSA:1.10.10.10 14 93 5.0E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1770 619bb603c8d275e187d32b7d42d3e8ab 357 Gene3D G3DSA:3.40.50.150 142 345 4.5E-32 T 12-10-2018 PA257_1770 619bb603c8d275e187d32b7d42d3e8ab 357 SUPERFAMILY SSF53335 151 348 2.28E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1770 619bb603c8d275e187d32b7d42d3e8ab 357 SUPERFAMILY SSF46785 27 91 9.42E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6576 d4ee2d180c1386a1a60933d03857e546 444 SMART SM01011 4 138 2.6E-69 T 12-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 PA257_6576 d4ee2d180c1386a1a60933d03857e546 444 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 128 1.3E-36 T 12-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 PA257_6576 d4ee2d180c1386a1a60933d03857e546 444 Gene3D G3DSA:3.90.230.10 174 443 1.5E-101 T 12-10-2018 PA257_6576 d4ee2d180c1386a1a60933d03857e546 444 Gene3D G3DSA:3.40.350.10 4 173 2.1E-56 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PA257_6576 d4ee2d180c1386a1a60933d03857e546 444 SUPERFAMILY SSF55920 177 437 3.14E-86 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like PA257_6576 d4ee2d180c1386a1a60933d03857e546 444 Pfam PF00557 Metallopeptidase family M24 184 414 9.6E-65 T 12-10-2018 IPR000994 Peptidase M24 PA257_6576 d4ee2d180c1386a1a60933d03857e546 444 SUPERFAMILY SSF53092 4 176 1.41E-56 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PA257_0047 7b3ce6b5a610eb86429fe71f5b642b09 295 Gene3D G3DSA:1.10.10.10 7 94 2.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0047 7b3ce6b5a610eb86429fe71f5b642b09 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.5E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0047 7b3ce6b5a610eb86429fe71f5b642b09 295 SUPERFAMILY SSF46785 4 87 2.72E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0047 7b3ce6b5a610eb86429fe71f5b642b09 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0047 7b3ce6b5a610eb86429fe71f5b642b09 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0047 7b3ce6b5a610eb86429fe71f5b642b09 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0047 7b3ce6b5a610eb86429fe71f5b642b09 295 Gene3D G3DSA:3.40.190.10 103 289 3.8E-40 T 12-10-2018 PA257_0047 7b3ce6b5a610eb86429fe71f5b642b09 295 Gene3D G3DSA:3.40.190.10 164 263 3.8E-40 T 12-10-2018 PA257_0047 7b3ce6b5a610eb86429fe71f5b642b09 295 SUPERFAMILY SSF53850 95 294 2.35E-26 T 12-10-2018 PA257_0047 7b3ce6b5a610eb86429fe71f5b642b09 295 Pfam PF03466 LysR substrate binding domain 95 293 4.7E-22 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4007 95bc6050fd76e15f7ff0921a376eafb5 395 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 266 393 3.1E-27 T 12-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 PA257_4007 95bc6050fd76e15f7ff0921a376eafb5 395 Pfam PF13511 Domain of unknown function (DUF4124) 144 180 1.3E-5 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 PA257_2512 b269e43e0f0dcc6ae71d03fac7d2929a 94 Pfam PF07511 Protein of unknown function (DUF1525) 1 91 4.0E-31 T 12-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 PA257_2512 b269e43e0f0dcc6ae71d03fac7d2929a 94 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 1 90 5.7E-33 T 12-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 PA257_4153 1b39a00fb4fcb25aaffae5a01ff38bcd 261 SUPERFAMILY SSF52096 7 260 2.65E-87 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_4153 1b39a00fb4fcb25aaffae5a01ff38bcd 261 Gene3D G3DSA:3.90.226.10 6 203 1.4E-68 T 12-10-2018 PA257_4153 1b39a00fb4fcb25aaffae5a01ff38bcd 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 260 1.3E-71 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_4153 1b39a00fb4fcb25aaffae5a01ff38bcd 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PA257_4153 1b39a00fb4fcb25aaffae5a01ff38bcd 261 Gene3D G3DSA:1.10.12.10 204 260 2.7E-24 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PA257_0489 4310b67bf606d7e844cf0fed3014bd21 257 PIRSF PIRSF028589 2 257 6.0E-47 T 12-10-2018 IPR016893 Protein of unknown function UCP028589 PA257_3135 4310b67bf606d7e844cf0fed3014bd21 257 PIRSF PIRSF028589 2 257 6.0E-47 T 12-10-2018 IPR016893 Protein of unknown function UCP028589 PA257_3864 0583ea42a98d86076c08d6e089c56427 177 SUPERFAMILY SSF55729 5 173 4.56E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_3864 0583ea42a98d86076c08d6e089c56427 177 Gene3D G3DSA:3.40.630.30 3 176 9.5E-49 T 12-10-2018 PA257_3864 0583ea42a98d86076c08d6e089c56427 177 Pfam PF00583 Acetyltransferase (GNAT) family 60 146 9.4E-12 T 12-10-2018 IPR000182 GNAT domain PA257_5497 58e0e807954272da9903afe6d817e2ac 403 PIRSF PIRSF038885 1 403 6.7E-161 T 12-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 PA257_5497 58e0e807954272da9903afe6d817e2ac 403 SUPERFAMILY SSF81648 281 396 5.01E-33 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 PA257_5497 58e0e807954272da9903afe6d817e2ac 403 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 278 379 1.3E-43 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 PA257_5497 58e0e807954272da9903afe6d817e2ac 403 Gene3D G3DSA:1.20.810.10 1 403 1.7E-156 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 PA257_5497 58e0e807954272da9903afe6d817e2ac 403 Pfam PF00033 Cytochrome b/b6/petB 24 211 8.7E-68 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 PA257_5497 58e0e807954272da9903afe6d817e2ac 403 SUPERFAMILY SSF81342 13 279 1.27E-96 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PA257_1367 983a2458915415e9258f9cc3fe8cb6ab 214 Gene3D G3DSA:1.25.40.10 32 212 4.2E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1367 983a2458915415e9258f9cc3fe8cb6ab 214 PIRSF PIRSF006170 2 214 1.9E-68 T 12-10-2018 IPR026039 Uncharacterised protein family UPF0070 PA257_1367 983a2458915415e9258f9cc3fe8cb6ab 214 SUPERFAMILY SSF48452 99 196 1.48E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1367 983a2458915415e9258f9cc3fe8cb6ab 214 Pfam PF09976 Tetratricopeptide repeat-like domain 14 210 1.2E-61 T 12-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 PA257_5762 5c2dae1edc2e8bb72c61bb3ef850f518 404 SUPERFAMILY SSF103365 7 404 1.83E-141 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PA257_5762 5c2dae1edc2e8bb72c61bb3ef850f518 404 Pfam PF01139 tRNA-splicing ligase RtcB 31 404 2.1E-134 T 12-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PA257_5762 5c2dae1edc2e8bb72c61bb3ef850f518 404 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 31 60 - T 12-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PA257_5762 5c2dae1edc2e8bb72c61bb3ef850f518 404 Gene3D G3DSA:3.90.1860.10 13 404 3.5E-118 T 12-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PA257_0583 1317bd8f0f2891cb2ec5cb0ded63c1ff 427 Pfam PF07687 Peptidase dimerisation domain 220 319 3.5E-5 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain PA257_0583 1317bd8f0f2891cb2ec5cb0ded63c1ff 427 SUPERFAMILY SSF55031 221 336 1.79E-29 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PA257_0583 1317bd8f0f2891cb2ec5cb0ded63c1ff 427 Gene3D G3DSA:3.40.630.10 27 410 1.9E-152 T 12-10-2018 PA257_0583 1317bd8f0f2891cb2ec5cb0ded63c1ff 427 PIRSF PIRSF001235 12 421 7.3E-135 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 PA257_0583 1317bd8f0f2891cb2ec5cb0ded63c1ff 427 Gene3D G3DSA:3.30.70.360 221 335 1.9E-152 T 12-10-2018 PA257_0583 1317bd8f0f2891cb2ec5cb0ded63c1ff 427 Pfam PF01546 Peptidase family M20/M25/M40 88 414 8.6E-39 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 PA257_0583 1317bd8f0f2891cb2ec5cb0ded63c1ff 427 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 18 415 1.0E-136 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 PA257_0583 1317bd8f0f2891cb2ec5cb0ded63c1ff 427 SUPERFAMILY SSF53187 6 415 1.09E-99 T 12-10-2018 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 SUPERFAMILY SSF48264 27 424 6.16E-65 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 Gene3D G3DSA:1.10.630.10 14 425 9.3E-69 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 368 377 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 PRINTS PR00463 E-class P450 group I signature 375 398 3.9E-17 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 PRINTS PR00463 E-class P450 group I signature 249 275 3.9E-17 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 PRINTS PR00463 E-class P450 group I signature 291 309 3.9E-17 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 PRINTS PR00463 E-class P450 group I signature 332 356 3.9E-17 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 PRINTS PR00463 E-class P450 group I signature 365 375 3.9E-17 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 PRINTS PR00385 P450 superfamily signature 292 303 9.4E-11 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 PRINTS PR00385 P450 superfamily signature 240 257 9.4E-11 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 PRINTS PR00385 P450 superfamily signature 375 386 9.4E-11 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 PRINTS PR00385 P450 superfamily signature 366 375 9.4E-11 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1542 4eed0da5737d3d6d3f184e498d954edc 425 Pfam PF00067 Cytochrome P450 228 398 3.4E-40 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PA257_1796 128699c7f42060ccb8f3ddceda86bb0d 198 Pfam PF00877 NlpC/P60 family 75 181 4.6E-32 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain PA257_1796 128699c7f42060ccb8f3ddceda86bb0d 198 SUPERFAMILY SSF54001 58 185 2.94E-43 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_1796 128699c7f42060ccb8f3ddceda86bb0d 198 Gene3D G3DSA:3.90.1720.10 16 180 8.8E-46 T 12-10-2018 PA257_4970 525d6a4a4f0d5cb2c8d3fec43b3b85bb 731 Pfam PF04632 Fusaric acid resistance protein family 40 724 4.8E-210 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 PA257_2925 639fd08f8453096e171b4f9149e9f7bd 389 SMART SM00558 101 225 5.9E-5 T 12-10-2018 IPR003347 JmjC domain PA257_2925 639fd08f8453096e171b4f9149e9f7bd 389 Pfam PF08007 Cupin superfamily protein 16 319 4.2E-106 T 12-10-2018 IPR003347 JmjC domain PA257_2925 639fd08f8453096e171b4f9149e9f7bd 389 SUPERFAMILY SSF51197 6 300 1.0E-78 T 12-10-2018 PA257_2925 639fd08f8453096e171b4f9149e9f7bd 389 Gene3D G3DSA:2.60.120.650 1 214 6.0E-95 T 12-10-2018 PA257_2925 639fd08f8453096e171b4f9149e9f7bd 389 Gene3D G3DSA:1.10.10.2510 215 389 6.5E-44 T 12-10-2018 PA257_5979 2d844661287b9f98def46a9d20975916 186 Gene3D G3DSA:2.30.22.10 118 173 1.0E-24 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 PA257_5979 2d844661287b9f98def46a9d20975916 186 Pfam PF01025 GrpE 13 173 9.0E-52 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PA257_5979 2d844661287b9f98def46a9d20975916 186 Gene3D G3DSA:3.90.20.20 15 116 1.2E-28 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 PA257_5979 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 125 140 2.8E-25 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PA257_5979 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 42 58 2.8E-25 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PA257_5979 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 70 85 2.8E-25 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PA257_5979 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 152 171 2.8E-25 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PA257_5979 2d844661287b9f98def46a9d20975916 186 ProSitePatterns PS01071 grpE protein signature. 128 171 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PA257_5979 2d844661287b9f98def46a9d20975916 186 Hamap MF_01151 Protein GrpE [grpE]. 3 173 20.578 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PA257_5979 2d844661287b9f98def46a9d20975916 186 SUPERFAMILY SSF58014 20 115 1.16E-26 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 PA257_5979 2d844661287b9f98def46a9d20975916 186 SUPERFAMILY SSF51064 118 174 4.97E-19 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 Gene3D G3DSA:3.90.640.10 298 352 9.1E-16 T 12-10-2018 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 374 388 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 SUPERFAMILY SSF53067 9 175 7.45E-28 T 12-10-2018 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 184 197 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 Gene3D G3DSA:3.30.420.40 10 177 3.6E-34 T 12-10-2018 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 Gene3D G3DSA:3.30.420.40 178 221 3.6E-34 T 12-10-2018 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 Gene3D G3DSA:3.30.420.40 353 398 9.1E-16 T 12-10-2018 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 Pfam PF00012 Hsp70 protein 299 395 6.4E-10 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 Pfam PF00012 Hsp70 protein 10 230 4.0E-13 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 SUPERFAMILY SSF53067 179 416 4.57E-35 T 12-10-2018 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 8 21 1.2E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 190 200 1.2E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 124 144 1.2E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_6151 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 36 48 1.2E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PA257_6070 ee8eb8e7b5f4bc4328d6fe9dc659fadd 179 SUPERFAMILY SSF52540 1 101 1.13E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6070 ee8eb8e7b5f4bc4328d6fe9dc659fadd 179 Pfam PF13671 AAA domain 1 51 2.9E-6 T 12-10-2018 PA257_6070 ee8eb8e7b5f4bc4328d6fe9dc659fadd 179 Gene3D G3DSA:3.40.50.300 1 125 4.0E-11 T 12-10-2018 PA257_4856 d3ec2769200b86fec58834a97193f1f8 347 SUPERFAMILY SSF51182 7 342 5.73E-106 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4856 d3ec2769200b86fec58834a97193f1f8 347 Gene3D G3DSA:2.60.120.10 3 347 1.1E-120 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4856 d3ec2769200b86fec58834a97193f1f8 347 Pfam PF07883 Cupin domain 89 150 2.4E-22 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_4856 d3ec2769200b86fec58834a97193f1f8 347 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 7 344 1.3E-161 T 12-10-2018 IPR011960 Gentisate 1,2-dioxygenase PA257_6940 a5810862ac6d3cdc3afa5166a0ccfc8f 400 SMART SM00833 256 373 5.8E-46 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PA257_6940 a5810862ac6d3cdc3afa5166a0ccfc8f 400 Gene3D G3DSA:3.40.50.300 2 229 6.2E-71 T 12-10-2018 PA257_6940 a5810862ac6d3cdc3afa5166a0ccfc8f 400 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 210 4.1E-58 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PA257_6940 a5810862ac6d3cdc3afa5166a0ccfc8f 400 SUPERFAMILY SSF52540 3 310 4.78E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6940 a5810862ac6d3cdc3afa5166a0ccfc8f 400 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 373 4.0E-29 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PA257_5698 fbf9dfb4498baac9adf0aa2d200554f4 147 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 17 144 1.9E-54 T 12-10-2018 IPR022262 Lipoprotein, putative PA257_3320 e39b14b53d42cbd94daaba3050875b43 450 PIRSF PIRSF002746 5 450 2.6E-161 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PA257_3320 e39b14b53d42cbd94daaba3050875b43 450 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 450 3.7E-162 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PA257_3320 e39b14b53d42cbd94daaba3050875b43 450 Pfam PF02447 GntP family permease 10 449 3.0E-184 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PA257_5108 e814da73d79520adcfd0ee909a0ff95f 203 Pfam PF13489 Methyltransferase domain 29 182 1.1E-19 T 12-10-2018 PA257_5108 e814da73d79520adcfd0ee909a0ff95f 203 SUPERFAMILY SSF53335 31 199 1.31E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5108 e814da73d79520adcfd0ee909a0ff95f 203 Gene3D G3DSA:3.40.50.150 24 191 1.6E-29 T 12-10-2018 PA257_0167 417cbc8fb66db9e02d9b8793d7bfe2b5 350 SUPERFAMILY SSF53590 39 348 6.41E-98 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like PA257_0167 417cbc8fb66db9e02d9b8793d7bfe2b5 350 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 45 55 - T 12-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 PA257_0167 417cbc8fb66db9e02d9b8793d7bfe2b5 350 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 41 340 2.5E-87 T 12-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PA257_0167 417cbc8fb66db9e02d9b8793d7bfe2b5 350 Gene3D G3DSA:3.90.245.10 29 349 9.0E-105 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like PA257_4897 88352943d1ed732e57e9ba92d0418a79 186 SUPERFAMILY SSF46785 7 138 3.71E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4897 88352943d1ed732e57e9ba92d0418a79 186 Pfam PF12802 MarR family 30 89 2.9E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4897 88352943d1ed732e57e9ba92d0418a79 186 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PA257_4897 88352943d1ed732e57e9ba92d0418a79 186 SMART SM00347 23 123 1.2E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4897 88352943d1ed732e57e9ba92d0418a79 186 Gene3D G3DSA:1.10.10.10 2 133 1.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4897 88352943d1ed732e57e9ba92d0418a79 186 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4897 88352943d1ed732e57e9ba92d0418a79 186 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_4897 88352943d1ed732e57e9ba92d0418a79 186 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_2392 516d2bb8a7353c3157a361d4d852f14b 257 SUPERFAMILY SSF51735 4 256 8.12E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2392 516d2bb8a7353c3157a361d4d852f14b 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 6.1E-41 T 12-10-2018 PA257_2392 516d2bb8a7353c3157a361d4d852f14b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 7.5E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2392 516d2bb8a7353c3157a361d4d852f14b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 7.5E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2392 516d2bb8a7353c3157a361d4d852f14b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 7.5E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2392 516d2bb8a7353c3157a361d4d852f14b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.5E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2392 516d2bb8a7353c3157a361d4d852f14b 257 Gene3D G3DSA:3.40.50.720 1 257 1.8E-68 T 12-10-2018 PA257_2392 516d2bb8a7353c3157a361d4d852f14b 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 190 0.0051 T 12-10-2018 PA257_4143 7c942c88f9a8969762cb8236487c3e39 201 Pfam PF16233 Domain of unknown function (DUF4893) 67 176 9.7E-22 T 12-10-2018 IPR032609 Protein of unknown function DUF4893 PA257_4750 c9fd75a3d4673a2c884c3a9599a111c6 255 Pfam PF00005 ABC transporter 22 181 5.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_4750 c9fd75a3d4673a2c884c3a9599a111c6 255 SMART SM00382 30 231 2.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_4750 c9fd75a3d4673a2c884c3a9599a111c6 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_4750 c9fd75a3d4673a2c884c3a9599a111c6 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 1.9E-10 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PA257_4750 c9fd75a3d4673a2c884c3a9599a111c6 255 SUPERFAMILY SSF52540 4 253 2.24E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4750 c9fd75a3d4673a2c884c3a9599a111c6 255 Gene3D G3DSA:3.40.50.300 4 254 1.9E-61 T 12-10-2018 PA257_1893 9fffa0932b594799927d37a542e017aa 152 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 11 151 3.9E-54 T 12-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_1893 9fffa0932b594799927d37a542e017aa 152 Pfam PF06754 Phosphonate metabolism protein PhnG 12 150 1.1E-55 T 12-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 Gene3D G3DSA:1.20.1740.10 8 414 2.0E-8 T 12-10-2018 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 235 254 1.0E-98 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 20 43 1.0E-98 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 92 112 1.0E-98 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 330 348 1.0E-98 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 296 315 1.0E-98 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 158 178 1.0E-98 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 196 218 1.0E-98 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 47 66 1.0E-98 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 351 370 1.0E-98 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 Pfam PF03222 Tryptophan/tyrosine permease family 12 405 1.5E-146 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 17 398 2.8E-150 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PIRSF PIRSF006060 320 414 3.4 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_6831 fc9c7b4ba510fa52fe5ab687e84d0569 417 PIRSF PIRSF006060 3 311 5.2E-11 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_6056 3d1d57a7494fa15705a0ef9f0077887f 244 Gene3D G3DSA:1.10.1020.10 58 152 7.8E-41 T 12-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 PA257_6056 3d1d57a7494fa15705a0ef9f0077887f 244 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 183 5.1E-25 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_6056 3d1d57a7494fa15705a0ef9f0077887f 244 PIRSF PIRSF000398 1 213 8.6E-44 T 12-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 PA257_6056 3d1d57a7494fa15705a0ef9f0077887f 244 Gene3D G3DSA:3.40.50.150 7 204 7.8E-41 T 12-10-2018 PA257_6056 3d1d57a7494fa15705a0ef9f0077887f 244 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 1.2E-14 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_6056 3d1d57a7494fa15705a0ef9f0077887f 244 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 1.2E-14 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_6056 3d1d57a7494fa15705a0ef9f0077887f 244 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 172 184 1.2E-14 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_6056 3d1d57a7494fa15705a0ef9f0077887f 244 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 30 44 1.2E-14 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 PA257_6056 3d1d57a7494fa15705a0ef9f0077887f 244 SUPERFAMILY SSF53335 4 234 1.5E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5985 aa5b390130384873332a9dd29e8bc697 101 Gene3D G3DSA:3.10.20.280 1 90 4.2E-29 T 12-10-2018 IPR037021 RnfH superfamily PA257_5985 aa5b390130384873332a9dd29e8bc697 101 Hamap MF_00460 Protein RnfH [rnfH]. 4 96 24.984 T 12-10-2018 IPR005346 RnfH protein PA257_5985 aa5b390130384873332a9dd29e8bc697 101 SUPERFAMILY SSF54285 4 80 1.57E-21 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PA257_5985 aa5b390130384873332a9dd29e8bc697 101 Pfam PF03658 RnfH family Ubiquitin 4 88 2.0E-30 T 12-10-2018 IPR005346 RnfH protein PA257_3825 31ba3269480f9803c01e404b6315780d 232 Gene3D G3DSA:3.20.20.70 4 199 4.1E-32 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_3825 31ba3269480f9803c01e404b6315780d 232 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 7 194 2.1E-72 T 12-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein PA257_3825 31ba3269480f9803c01e404b6315780d 232 SUPERFAMILY SSF102114 18 196 2.22E-20 T 12-10-2018 PA257_3825 31ba3269480f9803c01e404b6315780d 232 Pfam PF13353 4Fe-4S single cluster domain 19 95 9.9E-9 T 12-10-2018 PA257_3825 31ba3269480f9803c01e404b6315780d 232 Pfam PF04055 Radical SAM superfamily 27 168 2.6E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PA257_2364 6aee894477ace588b849a89ff23dd2c8 1248 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1246 0.0 T 12-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 PA257_2364 6aee894477ace588b849a89ff23dd2c8 1248 Pfam PF02514 CobN/Magnesium Chelatase 138 1231 0.0 T 12-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 PA257_0945 e263a93253ec29126d2ee79576d20d5f 346 PIRSF PIRSF018567 1 346 1.0E-166 T 12-10-2018 IPR011391 Acetoin catabolism kinase AcoX PA257_0945 e263a93253ec29126d2ee79576d20d5f 346 Gene3D G3DSA:3.40.50.10330 83 153 6.4E-6 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 PA257_0945 e263a93253ec29126d2ee79576d20d5f 346 SUPERFAMILY SSF111331 92 146 6.8E-7 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PA257_0945 e263a93253ec29126d2ee79576d20d5f 346 Pfam PF01513 ATP-NAD kinase 8 232 1.1E-15 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 PA257_0928 37ca8cf228e3632b951e2ca68ee709cd 496 Gene3D G3DSA:1.10.10.10 21 103 3.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0928 37ca8cf228e3632b951e2ca68ee709cd 496 Gene3D G3DSA:3.40.640.10 126 483 3.2E-110 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_0928 37ca8cf228e3632b951e2ca68ee709cd 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 7.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0928 37ca8cf228e3632b951e2ca68ee709cd 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 7.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0928 37ca8cf228e3632b951e2ca68ee709cd 496 SUPERFAMILY SSF53383 133 491 1.55E-82 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_0928 37ca8cf228e3632b951e2ca68ee709cd 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 87 9.2E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0928 37ca8cf228e3632b951e2ca68ee709cd 496 Pfam PF00155 Aminotransferase class I and II 165 405 8.8E-18 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_0928 37ca8cf228e3632b951e2ca68ee709cd 496 SMART SM00345 28 87 2.7E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_0928 37ca8cf228e3632b951e2ca68ee709cd 496 SUPERFAMILY SSF46785 19 91 1.36E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6691 5b105919850375226c4956c483327c26 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PA257_6691 5b105919850375226c4956c483327c26 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 3.3E-20 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_6691 5b105919850375226c4956c483327c26 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 3.3E-20 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_6691 5b105919850375226c4956c483327c26 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 3.3E-20 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PA257_6691 5b105919850375226c4956c483327c26 162 SUPERFAMILY SSF46785 10 69 1.56E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6691 5b105919850375226c4956c483327c26 162 Gene3D G3DSA:1.10.10.10 1 62 1.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6691 5b105919850375226c4956c483327c26 162 Gene3D G3DSA:3.30.70.920 63 156 6.2E-22 T 12-10-2018 PA257_6691 5b105919850375226c4956c483327c26 162 SMART SM00344 11 120 5.9E-48 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PA257_6691 5b105919850375226c4956c483327c26 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 57 1.6E-19 T 12-10-2018 PA257_6691 5b105919850375226c4956c483327c26 162 SUPERFAMILY SSF54909 73 159 3.35E-20 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_6691 5b105919850375226c4956c483327c26 162 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 1.0E-20 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PA257_2148 df6cbb5fbc2150a0508ad3d00e44296e 302 Gene3D G3DSA:3.40.50.2000 94 262 2.3E-13 T 12-10-2018 PA257_2148 df6cbb5fbc2150a0508ad3d00e44296e 302 SUPERFAMILY SSF53756 12 297 7.85E-21 T 12-10-2018 PA257_2148 df6cbb5fbc2150a0508ad3d00e44296e 302 Pfam PF13692 Glycosyl transferases group 1 121 260 5.3E-10 T 12-10-2018 PA257_2148 df6cbb5fbc2150a0508ad3d00e44296e 302 Gene3D G3DSA:3.40.50.2000 49 93 2.3E-13 T 12-10-2018 PA257_5493 8aa28c0c74b1e3e9646da0cb6288190b 192 SMART SM00749 130 191 0.093 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria PA257_5493 8aa28c0c74b1e3e9646da0cb6288190b 192 SMART SM00749 53 116 0.019 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria PA257_5493 8aa28c0c74b1e3e9646da0cb6288190b 192 Pfam PF04972 BON domain 125 190 1.9E-17 T 12-10-2018 IPR007055 BON domain PA257_5493 8aa28c0c74b1e3e9646da0cb6288190b 192 Pfam PF04972 BON domain 46 115 8.3E-12 T 12-10-2018 IPR007055 BON domain PA257_0670 35019a217582e52324d72abdfeec20a5 233 Pfam PF03473 MOSC domain 49 160 4.5E-21 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PA257_0670 35019a217582e52324d72abdfeec20a5 233 Gene3D G3DSA:2.40.33.20 2 233 6.3E-76 T 12-10-2018 PA257_0670 35019a217582e52324d72abdfeec20a5 233 Pfam PF03475 3-alpha domain 171 213 3.5E-15 T 12-10-2018 IPR005163 3-alpha domain PA257_0670 35019a217582e52324d72abdfeec20a5 233 SUPERFAMILY SSF50800 4 225 1.73E-77 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PA257_1666 3cc5ee2e82d95b21cf9aca9e47a67b12 297 SUPERFAMILY SSF161098 4 283 1.44E-53 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1666 3cc5ee2e82d95b21cf9aca9e47a67b12 297 Gene3D G3DSA:1.10.3720.10 7 292 6.6E-53 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1666 3cc5ee2e82d95b21cf9aca9e47a67b12 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 286 9.8E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_2676 8577bc9a93949f98d3ea2548a610566a 394 SMART SM00331 174 391 1.6E-13 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_2676 8577bc9a93949f98d3ea2548a610566a 394 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 201 391 9.2E-31 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_2676 8577bc9a93949f98d3ea2548a610566a 394 Pfam PF00072 Response regulator receiver domain 9 110 1.5E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2676 8577bc9a93949f98d3ea2548a610566a 394 Gene3D G3DSA:3.40.50.2300 2 142 1.1E-36 T 12-10-2018 PA257_2676 8577bc9a93949f98d3ea2548a610566a 394 Gene3D G3DSA:3.60.40.10 143 394 9.8E-62 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_2676 8577bc9a93949f98d3ea2548a610566a 394 SMART SM00448 6 118 2.1E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2676 8577bc9a93949f98d3ea2548a610566a 394 SUPERFAMILY SSF52172 7 149 5.98E-40 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3307 b8268329f6f0aead27643248b137dada 436 SUPERFAMILY SSF53850 25 408 5.69E-73 T 12-10-2018 PA257_3307 b8268329f6f0aead27643248b137dada 436 Pfam PF01547 Bacterial extracellular solute-binding protein 46 327 3.4E-47 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_3307 b8268329f6f0aead27643248b137dada 436 Gene3D G3DSA:3.40.190.10 138 422 9.2E-141 T 12-10-2018 PA257_3307 b8268329f6f0aead27643248b137dada 436 Gene3D G3DSA:3.40.190.10 42 393 9.2E-141 T 12-10-2018 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 475 482 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 494 1.7E-159 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 Pfam PF04552 Sigma-54, DNA binding domain 337 495 5.1E-72 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 Gene3D G3DSA:1.10.10.60 437 494 5.5E-24 T 12-10-2018 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 PRINTS PR00045 Sigma-54 factor signature 412 423 1.4E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 PRINTS PR00045 Sigma-54 factor signature 396 408 1.4E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 PRINTS PR00045 Sigma-54 factor signature 470 488 1.4E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 PRINTS PR00045 Sigma-54 factor signature 206 223 1.4E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 384 403 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 Pfam PF04963 Sigma-54 factor, core binding domain 130 323 4.3E-63 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 PIRSF PIRSF000774 1 497 1.6E-157 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 8.3E-17 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 PA257_5530 5bf60887ecf851fdf77990d038adc04f 497 Gene3D G3DSA:1.10.10.1330 136 261 1.3E-25 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily PA257_0560 a4d6fdd2ba75406b4baf01e06feae6c4 143 Pfam PF01047 MarR family 31 88 8.6E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_0560 a4d6fdd2ba75406b4baf01e06feae6c4 143 Gene3D G3DSA:1.10.10.10 5 138 4.4E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0560 a4d6fdd2ba75406b4baf01e06feae6c4 143 SUPERFAMILY SSF46785 4 134 1.84E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0560 a4d6fdd2ba75406b4baf01e06feae6c4 143 SMART SM00347 24 124 8.8E-31 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_0560 a4d6fdd2ba75406b4baf01e06feae6c4 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 3.1E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_0560 a4d6fdd2ba75406b4baf01e06feae6c4 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 3.1E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_0560 a4d6fdd2ba75406b4baf01e06feae6c4 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.1E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_2790 ef9a626f0562bad7edc1925be3d9983b 172 Pfam PF00565 Staphylococcal nuclease homologue 61 158 8.5E-7 T 12-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 PA257_2790 ef9a626f0562bad7edc1925be3d9983b 172 SUPERFAMILY SSF50199 24 165 3.14E-16 T 12-10-2018 PA257_2790 ef9a626f0562bad7edc1925be3d9983b 172 Gene3D G3DSA:2.40.50.90 16 167 1.3E-15 T 12-10-2018 IPR035437 SNase-like, OB-fold superfamily PA257_2790 ef9a626f0562bad7edc1925be3d9983b 172 SMART SM00318 24 160 2.5E-4 T 12-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 PA257_2394 7fd54fabca906b026cd81ecb5f217809 197 Pfam PF01810 LysE type translocator 13 191 8.5E-19 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_3680 9497c932df920464d399e68ea37cb8ed 220 SMART SM00947 27 193 2.4E-68 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_3680 9497c932df920464d399e68ea37cb8ed 220 Gene3D G3DSA:3.40.1050.10 1 202 4.2E-71 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 PA257_3680 9497c932df920464d399e68ea37cb8ed 220 SUPERFAMILY SSF53056 2 204 6.41E-67 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 PA257_3680 9497c932df920464d399e68ea37cb8ed 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_3680 9497c932df920464d399e68ea37cb8ed 220 Pfam PF00484 Carbonic anhydrase 34 189 2.1E-51 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_3680 9497c932df920464d399e68ea37cb8ed 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_6457 16a071c4edc24c44346f2669ba432b27 509 Gene3D G3DSA:1.20.1720.10 16 202 2.1E-45 T 12-10-2018 PA257_6457 16a071c4edc24c44346f2669ba432b27 509 SUPERFAMILY SSF103473 8 496 3.01E-64 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6457 16a071c4edc24c44346f2669ba432b27 509 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 493 1.3E-155 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 PA257_6457 16a071c4edc24c44346f2669ba432b27 509 Gene3D G3DSA:1.20.1250.20 203 432 9.1E-17 T 12-10-2018 PA257_6457 16a071c4edc24c44346f2669ba432b27 509 Pfam PF07690 Major Facilitator Superfamily 19 413 4.9E-52 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 PIRSF PIRSF017184 12 498 1.2E-127 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 SUPERFAMILY SSF64153 14 251 1.31E-59 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 499 21.261 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 16 215 22.674 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 236 494 1.4E-65 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 Gene3D G3DSA:3.40.50.10260 11 221 5.1E-56 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 16 213 2.7E-41 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 Gene3D G3DSA:3.40.1190.20 227 497 1.6E-81 T 12-10-2018 IPR029056 Ribokinase-like PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 SUPERFAMILY SSF53613 233 495 4.58E-73 T 12-10-2018 IPR029056 Ribokinase-like PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 Pfam PF01256 Carbohydrate kinase 252 487 5.3E-60 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PA257_6232 4aa458ca08f6a9dae015bdec1ea2aab5 502 Pfam PF03853 YjeF-related protein N-terminus 36 194 1.3E-39 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PA257_4385 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 Gene3D G3DSA:3.40.800.20 1 343 8.5E-121 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_4385 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 SUPERFAMILY SSF52768 2 343 2.49E-87 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily PA257_4385 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 Pfam PF00850 Histone deacetylase domain 29 338 9.3E-64 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_4385 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 PRINTS PR01270 Histone deacetylase superfamily signature 157 180 9.2E-14 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_4385 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 PRINTS PR01270 Histone deacetylase superfamily signature 190 205 9.2E-14 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_4385 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 PRINTS PR01270 Histone deacetylase superfamily signature 276 286 9.2E-14 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_3025 5f2b7ff3d41d89d085b3688f83063556 210 Gene3D G3DSA:3.40.630.30 7 203 6.4E-27 T 12-10-2018 PA257_3025 5f2b7ff3d41d89d085b3688f83063556 210 SUPERFAMILY SSF55729 8 199 1.99E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_3025 5f2b7ff3d41d89d085b3688f83063556 210 Pfam PF13508 Acetyltransferase (GNAT) domain 130 186 6.7E-9 T 12-10-2018 IPR000182 GNAT domain PA257_4612 9e651527a7c5f9e76fda95e6fdd4ff13 472 Pfam PF13520 Amino acid permease 9 412 3.1E-61 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_4612 9e651527a7c5f9e76fda95e6fdd4ff13 472 PIRSF PIRSF006060 1 470 1.3E-44 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_4612 9e651527a7c5f9e76fda95e6fdd4ff13 472 Gene3D G3DSA:1.20.1740.10 3 445 1.9E-50 T 12-10-2018 PA257_4612 9e651527a7c5f9e76fda95e6fdd4ff13 472 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 472 8.7E-153 T 12-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 PA257_1052 5b515835fcc1f25f63195cd27409a5f7 177 Gene3D G3DSA:2.60.120.10 25 177 5.0E-49 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1052 5b515835fcc1f25f63195cd27409a5f7 177 SUPERFAMILY SSF51182 36 159 1.17E-22 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_1052 5b515835fcc1f25f63195cd27409a5f7 177 Pfam PF07883 Cupin domain 75 131 4.2E-7 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_4294 bffb1e1ea6a0dc71cc814d1da89df2a3 421 Gene3D G3DSA:3.40.50.10180 37 252 5.1E-133 T 12-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 PA257_4294 bffb1e1ea6a0dc71cc814d1da89df2a3 421 Pfam PF05161 MOFRL family 307 412 2.5E-35 T 12-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 PA257_4294 bffb1e1ea6a0dc71cc814d1da89df2a3 421 Pfam PF13660 Domain of unknown function (DUF4147) 9 228 3.9E-79 T 12-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 PA257_4294 bffb1e1ea6a0dc71cc814d1da89df2a3 421 SUPERFAMILY SSF82544 4 418 2.48E-146 T 12-10-2018 PA257_4294 bffb1e1ea6a0dc71cc814d1da89df2a3 421 Gene3D G3DSA:3.40.1480.10 253 413 5.1E-133 T 12-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily PA257_0867 de3b6b0efd8064e9cd1df60be32ee485 547 Gene3D G3DSA:3.40.50.980 190 363 5.7E-58 T 12-10-2018 PA257_0867 de3b6b0efd8064e9cd1df60be32ee485 547 Gene3D G3DSA:3.30.300.310 441 545 7.1E-30 T 12-10-2018 PA257_0867 de3b6b0efd8064e9cd1df60be32ee485 547 Gene3D G3DSA:3.40.50.980 31 185 5.8E-37 T 12-10-2018 PA257_0867 de3b6b0efd8064e9cd1df60be32ee485 547 Pfam PF00501 AMP-binding enzyme 41 445 2.6E-86 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_0867 de3b6b0efd8064e9cd1df60be32ee485 547 Gene3D G3DSA:2.30.38.10 364 439 1.3E-31 T 12-10-2018 PA257_0867 de3b6b0efd8064e9cd1df60be32ee485 547 SUPERFAMILY SSF56801 21 541 4.84E-134 T 12-10-2018 PA257_0867 de3b6b0efd8064e9cd1df60be32ee485 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 3.7E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_0867 de3b6b0efd8064e9cd1df60be32ee485 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_4309 868876c807f2ace05b69d017a359358a 268 SUPERFAMILY SSF46894 191 259 9.52E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_4309 868876c807f2ace05b69d017a359358a 268 Pfam PF00196 Bacterial regulatory proteins, luxR family 202 255 3.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4309 868876c807f2ace05b69d017a359358a 268 SMART SM00421 200 257 2.5E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4309 868876c807f2ace05b69d017a359358a 268 Gene3D G3DSA:1.10.10.10 160 266 4.3E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4309 868876c807f2ace05b69d017a359358a 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 217 233 4.9E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4309 868876c807f2ace05b69d017a359358a 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 217 4.9E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_4309 868876c807f2ace05b69d017a359358a 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 233 245 4.9E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2216 28e4a4f78843da2ac6d2ce917af693a5 87 Pfam PF07023 Protein of unknown function (DUF1315) 6 67 8.4E-29 T 12-10-2018 IPR009749 Protein of unknown function DUF1315 PA257_0108 6c4bdfbcef11da5f0697bd2bf61b7a6d 169 Pfam PF04965 Gene 25-like lysozyme 39 141 1.3E-21 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD PA257_0108 6c4bdfbcef11da5f0697bd2bf61b7a6d 169 SUPERFAMILY SSF160719 37 152 9.55E-10 T 12-10-2018 PA257_0108 6c4bdfbcef11da5f0697bd2bf61b7a6d 169 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 161 1.1E-27 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein PA257_1330 404cf74ee17344d4278a840ae14ddc1f 325 SUPERFAMILY SSF53822 37 286 1.73E-24 T 12-10-2018 IPR028082 Periplasmic binding protein-like I PA257_1330 404cf74ee17344d4278a840ae14ddc1f 325 Gene3D G3DSA:3.40.50.2300 49 295 1.2E-96 T 12-10-2018 PA257_1330 404cf74ee17344d4278a840ae14ddc1f 325 Gene3D G3DSA:3.40.50.2300 146 317 1.2E-96 T 12-10-2018 PA257_1330 404cf74ee17344d4278a840ae14ddc1f 325 Pfam PF04392 ABC transporter substrate binding protein 32 323 1.5E-123 T 12-10-2018 IPR007487 ABC transporter, substrate-binding protein PA257_4269 a47daa8571746a658ddce62cc400720e 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 85 4.3E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4269 a47daa8571746a658ddce62cc400720e 259 Pfam PF07729 FCD domain 95 217 4.5E-22 T 12-10-2018 IPR011711 GntR, C-terminal PA257_4269 a47daa8571746a658ddce62cc400720e 259 SUPERFAMILY SSF46785 22 89 1.21E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4269 a47daa8571746a658ddce62cc400720e 259 SMART SM00895 95 218 1.3E-19 T 12-10-2018 IPR011711 GntR, C-terminal PA257_4269 a47daa8571746a658ddce62cc400720e 259 Gene3D G3DSA:1.10.10.10 9 86 3.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4269 a47daa8571746a658ddce62cc400720e 259 SUPERFAMILY SSF48008 91 219 6.02E-27 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_4269 a47daa8571746a658ddce62cc400720e 259 SMART SM00345 27 85 7.6E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4269 a47daa8571746a658ddce62cc400720e 259 Gene3D G3DSA:1.20.120.530 89 228 5.1E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_1446 ae3b026f3d9a4089d50e9a50fd887a27 425 Gene3D G3DSA:1.10.1200.160 357 390 3.6E-54 T 12-10-2018 PA257_1446 ae3b026f3d9a4089d50e9a50fd887a27 425 Pfam PF03743 Bacterial conjugation TrbI-like protein 231 411 1.1E-57 T 12-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PA257_1446 ae3b026f3d9a4089d50e9a50fd887a27 425 Gene3D G3DSA:2.40.128.260 233 409 3.6E-54 T 12-10-2018 PA257_6314 a70d0ba3a60bedd40c8b3953b0745fbb 486 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 472 46.297 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 PA257_6314 a70d0ba3a60bedd40c8b3953b0745fbb 486 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 455 2.1E-151 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 PA257_0802 33c07169b9819966d3126c00a7b22551 479 Pfam PF04225 Opacity-associated protein A LysM-like domain 113 193 5.6E-11 T 12-10-2018 IPR007340 Opacity-associated protein A PA257_0802 33c07169b9819966d3126c00a7b22551 479 Gene3D G3DSA:2.70.70.10 310 441 2.0E-95 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_0802 33c07169b9819966d3126c00a7b22551 479 Pfam PF01551 Peptidase family M23 339 435 1.4E-32 T 12-10-2018 IPR016047 Peptidase M23 PA257_0802 33c07169b9819966d3126c00a7b22551 479 Gene3D G3DSA:3.10.450.350 102 196 3.2E-16 T 12-10-2018 PA257_0802 33c07169b9819966d3126c00a7b22551 479 SUPERFAMILY SSF51261 188 436 2.93E-73 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_0802 33c07169b9819966d3126c00a7b22551 479 Gene3D G3DSA:3.10.450.350 213 456 2.0E-95 T 12-10-2018 PA257_6907 8b976a20ad6d55e82d40c9a6f0133de5 285 Gene3D G3DSA:1.10.10.10 1 77 7.3E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6907 8b976a20ad6d55e82d40c9a6f0133de5 285 SUPERFAMILY SSF53697 97 266 1.82E-16 T 12-10-2018 PA257_6907 8b976a20ad6d55e82d40c9a6f0133de5 285 Gene3D G3DSA:3.40.50.10490 95 278 5.5E-27 T 12-10-2018 PA257_6907 8b976a20ad6d55e82d40c9a6f0133de5 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 72 2.3E-11 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PA257_6907 8b976a20ad6d55e82d40c9a6f0133de5 285 SUPERFAMILY SSF46689 2 78 3.05E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6907 8b976a20ad6d55e82d40c9a6f0133de5 285 Pfam PF01380 SIS domain 135 253 1.5E-12 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PA257_4764 7e3c0dd9a0cc9d1882f65dd1ae1396eb 174 Pfam PF01899 Na+/H+ ion antiporter subunit 21 168 3.5E-43 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PA257_4764 7e3c0dd9a0cc9d1882f65dd1ae1396eb 174 PIRSF PIRSF019239 10 174 1.1E-42 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PA257_3068 b99c14491fda08a383485fda77c01238 456 Gene3D G3DSA:2.40.160.10 22 456 1.5E-149 T 12-10-2018 IPR023614 Porin domain superfamily PA257_3068 b99c14491fda08a383485fda77c01238 456 Pfam PF03573 outer membrane porin, OprD family 43 454 7.6E-147 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_1247 c2e87b80dbc7175007bb15be503aeea5 150 Pfam PF02391 MoaE protein 6 119 2.5E-34 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 PA257_1247 c2e87b80dbc7175007bb15be503aeea5 150 Gene3D G3DSA:3.90.1170.40 1 148 6.7E-50 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 PA257_1247 c2e87b80dbc7175007bb15be503aeea5 150 SUPERFAMILY SSF54690 3 148 5.1E-51 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 SMART SM01091 368 446 2.7E-16 T 12-10-2018 IPR005170 Transporter-associated domain PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 SMART SM00116 305 353 0.1 T 12-10-2018 IPR000644 CBS domain PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 SMART SM00116 239 288 1.6E-7 T 12-10-2018 IPR000644 CBS domain PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF01595 Domain of unknown function DUF21 21 209 6.0E-51 T 12-10-2018 IPR002550 CNNM, transmembrane domain PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 Gene3D G3DSA:3.30.465.10 366 445 1.0E-14 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 SUPERFAMILY SSF56176 367 445 7.09E-15 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF03471 Transporter associated domain 372 444 8.9E-17 T 12-10-2018 IPR005170 Transporter-associated domain PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF00571 CBS domain 237 288 9.1E-8 T 12-10-2018 IPR000644 CBS domain PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF00571 CBS domain 304 353 7.8E-6 T 12-10-2018 IPR000644 CBS domain PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 SUPERFAMILY SSF54631 224 363 2.4E-27 T 12-10-2018 PA257_6750 22d459e575a24d58ebda4e106409c6a8 446 Gene3D G3DSA:3.10.580.10 213 361 3.5E-34 T 12-10-2018 PA257_0992 7ef4ca31ce2679b245e9ff81c02285f8 246 PIRSF PIRSF028589 2 244 6.8E-41 T 12-10-2018 IPR016893 Protein of unknown function UCP028589 PA257_3010 953bcb1f97822696a7bf37fb5b4c266c 239 Gene3D G3DSA:3.30.70.260 147 239 8.4E-17 T 12-10-2018 PA257_3010 953bcb1f97822696a7bf37fb5b4c266c 239 PRINTS PR01837 MgtC/SapB protein signature 21 40 4.8E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_3010 953bcb1f97822696a7bf37fb5b4c266c 239 PRINTS PR01837 MgtC/SapB protein signature 40 58 4.8E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_3010 953bcb1f97822696a7bf37fb5b4c266c 239 PRINTS PR01837 MgtC/SapB protein signature 66 88 4.8E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_3010 953bcb1f97822696a7bf37fb5b4c266c 239 PRINTS PR01837 MgtC/SapB protein signature 93 117 4.8E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_3010 953bcb1f97822696a7bf37fb5b4c266c 239 Pfam PF02308 MgtC family 18 138 1.1E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_4585 0dfcd473f20f2c85b96d63ef0e7ed2ee 606 Gene3D G3DSA:3.30.300.30 406 501 5.8E-23 T 12-10-2018 PA257_4585 0dfcd473f20f2c85b96d63ef0e7ed2ee 606 SUPERFAMILY SSF56801 12 524 7.98E-106 T 12-10-2018 PA257_4585 0dfcd473f20f2c85b96d63ef0e7ed2ee 606 ProSitePatterns PS00455 Putative AMP-binding domain signature. 155 166 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_4585 0dfcd473f20f2c85b96d63ef0e7ed2ee 606 Gene3D G3DSA:3.40.50.12780 4 405 2.4E-138 T 12-10-2018 PA257_4585 0dfcd473f20f2c85b96d63ef0e7ed2ee 606 Gene3D G3DSA:1.10.1200.10 509 590 2.2E-16 T 12-10-2018 IPR036736 ACP-like superfamily PA257_4585 0dfcd473f20f2c85b96d63ef0e7ed2ee 606 Pfam PF00550 Phosphopantetheine attachment site 517 577 2.0E-5 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_4585 0dfcd473f20f2c85b96d63ef0e7ed2ee 606 Pfam PF00501 AMP-binding enzyme 21 410 4.4E-62 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_4585 0dfcd473f20f2c85b96d63ef0e7ed2ee 606 SUPERFAMILY SSF47336 513 578 3.06E-7 T 12-10-2018 IPR036736 ACP-like superfamily PA257_0110 c3e11a22e0b30f255d0e175769b90b71 348 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 22 319 3.9E-111 T 12-10-2018 IPR010732 Type VI secretion, TssG-like PA257_0110 c3e11a22e0b30f255d0e175769b90b71 348 Pfam PF06996 Type VI secretion, TssG 21 319 1.5E-107 T 12-10-2018 IPR010732 Type VI secretion, TssG-like PA257_4731 2e80b52abd07e1bb525b78f411a09344 74 SUPERFAMILY SSF47336 8 72 7.59E-10 T 12-10-2018 IPR036736 ACP-like superfamily PA257_4731 2e80b52abd07e1bb525b78f411a09344 74 Pfam PF00550 Phosphopantetheine attachment site 20 72 2.2E-5 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain PA257_4731 2e80b52abd07e1bb525b78f411a09344 74 Gene3D G3DSA:1.10.1200.10 4 73 6.7E-12 T 12-10-2018 IPR036736 ACP-like superfamily PA257_0276 11641b0928ade837c87438df7ee5c30b 288 Gene3D G3DSA:1.10.10.60 184 288 7.3E-25 T 12-10-2018 PA257_0276 11641b0928ade837c87438df7ee5c30b 288 SUPERFAMILY SSF46689 241 287 8.8E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0276 11641b0928ade837c87438df7ee5c30b 288 SUPERFAMILY SSF51182 40 150 7.91E-12 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_0276 11641b0928ade837c87438df7ee5c30b 288 Pfam PF12833 Helix-turn-helix domain 208 286 8.4E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0276 11641b0928ade837c87438df7ee5c30b 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 8.2E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_0276 11641b0928ade837c87438df7ee5c30b 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 8.2E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PA257_0276 11641b0928ade837c87438df7ee5c30b 288 SMART SM00342 202 285 3.7E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0276 11641b0928ade837c87438df7ee5c30b 288 Pfam PF02311 AraC-like ligand binding domain 32 161 3.1E-8 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_0276 11641b0928ade837c87438df7ee5c30b 288 Gene3D G3DSA:2.60.120.10 27 106 5.3E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_5935 014d7c498a4d3097b8ab36de28401b02 390 Gene3D G3DSA:3.40.640.10 4 388 4.9E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_5935 014d7c498a4d3097b8ab36de28401b02 390 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PA257_5935 014d7c498a4d3097b8ab36de28401b02 390 Pfam PF00155 Aminotransferase class I and II 33 381 4.7E-53 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_5935 014d7c498a4d3097b8ab36de28401b02 390 SUPERFAMILY SSF53383 6 387 9.65E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_4948 0c9994835921e02b0384498864d7e699 340 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 333 9.4E-138 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 PA257_4948 0c9994835921e02b0384498864d7e699 340 Gene3D G3DSA:3.40.630.30 1 270 3.6E-118 T 12-10-2018 PA257_4948 0c9994835921e02b0384498864d7e699 340 SUPERFAMILY SSF55729 1 334 2.41E-128 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_4948 0c9994835921e02b0384498864d7e699 340 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 2 334 1.8E-144 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 PA257_4948 0c9994835921e02b0384498864d7e699 340 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 2 334 1.2E-155 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 PA257_4892 01b9c7502b996503e0a6b57c41545812 234 Gene3D G3DSA:3.40.50.300 1 164 8.9E-35 T 12-10-2018 PA257_4892 01b9c7502b996503e0a6b57c41545812 234 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 232 9.4E-90 T 12-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 PA257_4892 01b9c7502b996503e0a6b57c41545812 234 Gene3D G3DSA:1.10.8.60 168 233 1.2E-27 T 12-10-2018 PA257_4892 01b9c7502b996503e0a6b57c41545812 234 SUPERFAMILY SSF52540 14 213 9.68E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4892 01b9c7502b996503e0a6b57c41545812 234 Pfam PF00308 Bacterial dnaA protein 14 212 8.7E-20 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA PA257_5580 4e72418f9c0622081cfd8f39985b202a 306 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 291 1.9E-74 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PA257_5580 4e72418f9c0622081cfd8f39985b202a 306 Gene3D G3DSA:2.40.100.10 178 300 5.5E-38 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_5580 4e72418f9c0622081cfd8f39985b202a 306 SMART SM00797 22 304 6.4E-119 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PA257_5580 4e72418f9c0622081cfd8f39985b202a 306 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 23 286 1.2E-77 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PA257_5580 4e72418f9c0622081cfd8f39985b202a 306 SUPERFAMILY SSF50891 181 290 5.69E-9 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_1258 44de53bfe6be3a79e5d2daeda34cd8c4 175 Pfam PF13503 Domain of unknown function (DUF4123) 17 143 4.0E-22 T 12-10-2018 IPR025391 Domain of unknown function DUF4123 PA257_4834 4c148336c6f3500f2d117b3585bab54b 205 SUPERFAMILY SSF49401 27 205 4.03E-21 T 12-10-2018 IPR008966 Adhesion domain superfamily PA257_4834 4c148336c6f3500f2d117b3585bab54b 205 Gene3D G3DSA:2.60.40.1090 27 204 4.9E-26 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 PA257_4834 4c148336c6f3500f2d117b3585bab54b 205 Pfam PF00419 Fimbrial protein 28 204 1.2E-12 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PA257_2447 1ef84922c660fd95a85b2b6f8cf53cc6 144 Pfam PF07681 DoxX 16 103 1.8E-20 T 12-10-2018 IPR032808 DoxX family PA257_0282 7110360c47ae5d78e519455079b189df 496 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 8 455 5.4E-90 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 PA257_0282 7110360c47ae5d78e519455079b189df 496 Gene3D G3DSA:3.40.1670.10 329 457 3.8E-49 T 12-10-2018 PA257_0282 7110360c47ae5d78e519455079b189df 496 SUPERFAMILY SSF143968 317 493 6.8E-31 T 12-10-2018 PA257_0282 7110360c47ae5d78e519455079b189df 496 SUPERFAMILY SSF50475 7 314 2.2E-87 T 12-10-2018 PA257_0282 7110360c47ae5d78e519455079b189df 496 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 13 429 5.4E-114 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 PA257_0282 7110360c47ae5d78e519455079b189df 496 Hamap MF_01983 UbiD-like decarboxylase. 4 493 51.372 T 12-10-2018 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 PA257_0432 c039ace661b86d5fddb71443a305b1e3 192 Pfam PF01553 Acyltransferase 31 146 5.2E-10 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_0432 c039ace661b86d5fddb71443a305b1e3 192 SMART SM00563 38 150 8.8E-20 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_0432 c039ace661b86d5fddb71443a305b1e3 192 SUPERFAMILY SSF69593 23 164 3.01E-21 T 12-10-2018 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 5.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 5.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 5.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 5.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 410 1.5E-161 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 SUPERFAMILY SSF51419 26 282 4.97E-81 T 12-10-2018 IPR029066 PLP-binding barrel PA257_6633 56f281f43ee96d544a147d35bf94e991 415 Gene3D G3DSA:3.20.20.10 34 275 4.6E-152 T 12-10-2018 IPR029066 PLP-binding barrel PA257_6633 56f281f43ee96d544a147d35bf94e991 415 Gene3D G3DSA:2.40.37.10 16 407 4.6E-152 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 368 1.7E-24 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 9.5E-27 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 9.5E-27 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 9.5E-27 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 9.5E-27 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 9.5E-27 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 411 42.986 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 280 1.5E-80 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 SUPERFAMILY SSF50621 255 411 1.93E-52 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PA257_6633 56f281f43ee96d544a147d35bf94e991 415 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PA257_5858 60511091fa58cb0e3e49ffe818a9741b 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 190 7.7E-29 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain PA257_5858 60511091fa58cb0e3e49ffe818a9741b 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 97 1.0E-45 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PA257_5858 60511091fa58cb0e3e49ffe818a9741b 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 175 1.9E-45 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PA257_5858 60511091fa58cb0e3e49ffe818a9741b 204 Gene3D G3DSA:2.170.120.20 99 197 5.0E-26 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal PA257_5858 60511091fa58cb0e3e49ffe818a9741b 204 Gene3D G3DSA:2.40.240.10 3 97 1.2E-31 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_5858 60511091fa58cb0e3e49ffe818a9741b 204 SUPERFAMILY SSF50715 4 196 1.74E-55 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PA257_5858 60511091fa58cb0e3e49ffe818a9741b 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 188 30.687 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PA257_5858 60511091fa58cb0e3e49ffe818a9741b 204 Pfam PF01386 Ribosomal L25p family 6 94 5.4E-27 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PA257_1245 5b6267eb0e023d157e67737999c14635 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 1 155 35.449 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1245 5b6267eb0e023d157e67737999c14635 160 SUPERFAMILY SSF55040 9 152 3.79E-60 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1245 5b6267eb0e023d157e67737999c14635 160 Pfam PF01967 MoaC family 13 147 7.6E-56 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1245 5b6267eb0e023d157e67737999c14635 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 2 149 6.4E-70 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_1245 5b6267eb0e023d157e67737999c14635 160 Gene3D G3DSA:3.30.70.640 1 158 8.8E-69 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PA257_0206 9d61b2673483b9b517d6fe068afb1581 121 Gene3D G3DSA:3.40.50.12740 1 121 9.2E-38 T 12-10-2018 PA257_0206 9d61b2673483b9b517d6fe068afb1581 121 Pfam PF00072 Response regulator receiver domain 5 115 1.9E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0206 9d61b2673483b9b517d6fe068afb1581 121 SUPERFAMILY SSF52172 3 120 4.27E-37 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0206 9d61b2673483b9b517d6fe068afb1581 121 SMART SM00448 3 116 1.6E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4613 7a54ab9aea55662ffbae7bc0dd6cabd0 223 Gene3D G3DSA:1.10.340.30 34 150 7.6E-23 T 12-10-2018 PA257_4613 7a54ab9aea55662ffbae7bc0dd6cabd0 223 Pfam PF03352 Methyladenine glycosylase 39 132 2.2E-18 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 PA257_4613 7a54ab9aea55662ffbae7bc0dd6cabd0 223 SUPERFAMILY SSF48150 37 182 2.83E-39 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PA257_3034 4c5e447bdde4dac670cf893a87531cb3 331 SUPERFAMILY SSF51430 1 312 4.71E-104 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_3034 4c5e447bdde4dac670cf893a87531cb3 331 Pfam PF00248 Aldo/keto reductase family 16 310 2.0E-81 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain PA257_3034 4c5e447bdde4dac670cf893a87531cb3 331 Gene3D G3DSA:3.20.20.100 1 330 3.8E-124 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 SMART SM00387 416 527 6.0E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 SUPERFAMILY SSF47384 298 372 1.77E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 SMART SM00388 309 375 2.0E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 3.0E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 3.0E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 3.0E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 SUPERFAMILY SSF55874 365 523 3.27E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 Gene3D G3DSA:3.30.565.10 376 528 1.0E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 374 8.4E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 SMART SM00091 196 260 9.1E-4 T 12-10-2018 IPR000014 PAS domain PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 Gene3D G3DSA:1.10.287.130 296 375 9.1E-19 T 12-10-2018 PA257_5722 f9c462c0e2e66c4181cd68dfb3afe1a3 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 523 1.8E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_5792 f1dbc11260e62f354871987fd962ff57 84 Pfam PF04325 Protein of unknown function (DUF465) 29 75 2.8E-12 T 12-10-2018 IPR007420 Protein of unknown function DUF465 PA257_5792 f1dbc11260e62f354871987fd962ff57 84 Gene3D G3DSA:1.20.58.660 11 84 8.5E-17 T 12-10-2018 PA257_0775 bd32a9a3ddcff544ff20c9121a7bc899 114 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 20 94 3.2E-18 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative PA257_4189 39351695d39c61148c6c807ea33a5a32 148 Pfam PF03061 Thioesterase superfamily 62 134 5.9E-13 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_4189 39351695d39c61148c6c807ea33a5a32 148 Gene3D G3DSA:3.10.129.10 4 147 7.4E-53 T 12-10-2018 PA257_4189 39351695d39c61148c6c807ea33a5a32 148 SUPERFAMILY SSF54637 12 145 3.46E-23 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6937 83edce0510170e791aa40db96d6f5ed0 322 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 237 318 5.8E-8 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PA257_6937 83edce0510170e791aa40db96d6f5ed0 322 Gene3D G3DSA:3.40.50.300 2 191 2.2E-35 T 12-10-2018 PA257_6937 83edce0510170e791aa40db96d6f5ed0 322 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 168 2.7E-38 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PA257_6937 83edce0510170e791aa40db96d6f5ed0 322 SUPERFAMILY SSF52540 4 165 2.6E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6937 83edce0510170e791aa40db96d6f5ed0 322 SMART SM00833 235 318 1.2E-6 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PA257_2068 a48be9c8f2a75c5c4865ab3416eef199 244 Gene3D G3DSA:3.40.30.10 35 232 1.2E-56 T 12-10-2018 PA257_2068 a48be9c8f2a75c5c4865ab3416eef199 244 SUPERFAMILY SSF52833 31 240 6.49E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2068 a48be9c8f2a75c5c4865ab3416eef199 244 Gene3D G3DSA:1.10.472.60 76 204 1.2E-56 T 12-10-2018 PA257_1832 451706c194a580dc049d7c1b2a7d66e3 103 Gene3D G3DSA:1.10.3340.10 2 103 2.6E-48 T 12-10-2018 IPR036810 SMc04008-like superfamily PA257_1832 451706c194a580dc049d7c1b2a7d66e3 103 SUPERFAMILY SSF158757 5 82 4.05E-38 T 12-10-2018 IPR036810 SMc04008-like superfamily PA257_1832 451706c194a580dc049d7c1b2a7d66e3 103 Pfam PF06844 Protein of unknown function (DUF1244) 32 97 2.7E-38 T 12-10-2018 IPR023163 SMc04008-like domain PA257_3800 71834a785351cfe95fa9708f07e97267 365 SUPERFAMILY SSF55729 1 146 4.12E-33 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_3800 71834a785351cfe95fa9708f07e97267 365 Gene3D G3DSA:3.40.630.30 1 158 1.3E-34 T 12-10-2018 PA257_3800 71834a785351cfe95fa9708f07e97267 365 Pfam PF00583 Acetyltransferase (GNAT) family 15 125 1.9E-16 T 12-10-2018 IPR000182 GNAT domain PA257_3800 71834a785351cfe95fa9708f07e97267 365 Pfam PF11814 Peptidase_C39 like family 159 361 8.1E-92 T 12-10-2018 IPR021770 Protein of unknown function DUF3335 PA257_6107 571e0428d021f2c6731edbb05e75cb0f 205 Pfam PF03006 Haemolysin-III related 2 197 5.1E-45 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 PA257_6107 571e0428d021f2c6731edbb05e75cb0f 205 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 204 1.7E-63 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 PA257_6950 c3d49b8ad11e0c91833513e974b2278b 319 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 315 2.3E-117 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family PA257_6950 c3d49b8ad11e0c91833513e974b2278b 319 Pfam PF16868 NMT1-like family 31 315 8.9E-97 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family PA257_6950 c3d49b8ad11e0c91833513e974b2278b 319 Gene3D G3DSA:3.40.190.10 116 252 1.4E-99 T 12-10-2018 PA257_6950 c3d49b8ad11e0c91833513e974b2278b 319 SUPERFAMILY SSF53850 26 317 2.32E-75 T 12-10-2018 PA257_6950 c3d49b8ad11e0c91833513e974b2278b 319 Gene3D G3DSA:3.40.190.10 31 315 1.4E-99 T 12-10-2018 PA257_0878 21a4b56dd0acec433bfb93b2bd34feb0 402 SUPERFAMILY SSF51905 5 366 9.16E-66 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0878 21a4b56dd0acec433bfb93b2bd34feb0 402 SUPERFAMILY SSF54373 185 293 2.43E-31 T 12-10-2018 PA257_0878 21a4b56dd0acec433bfb93b2bd34feb0 402 Gene3D G3DSA:3.30.9.30 40 296 2.7E-146 T 12-10-2018 PA257_0878 21a4b56dd0acec433bfb93b2bd34feb0 402 Gene3D G3DSA:3.50.50.60 7 359 2.7E-146 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0878 21a4b56dd0acec433bfb93b2bd34feb0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 317 3.5E-21 T 12-10-2018 PA257_0878 21a4b56dd0acec433bfb93b2bd34feb0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.5E-21 T 12-10-2018 PA257_0878 21a4b56dd0acec433bfb93b2bd34feb0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 3.5E-21 T 12-10-2018 PA257_0878 21a4b56dd0acec433bfb93b2bd34feb0 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 333 3.5E-21 T 12-10-2018 PA257_0878 21a4b56dd0acec433bfb93b2bd34feb0 402 Pfam PF01494 FAD binding domain 6 176 2.5E-13 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 PA257_0878 21a4b56dd0acec433bfb93b2bd34feb0 402 Pfam PF01494 FAD binding domain 299 362 1.3E-9 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 PA257_3458 bad8adf1a15816b54ef8671bf14a8f96 387 Pfam PF05155 Phage X family 298 379 8.6E-13 T 12-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 PA257_3449 bad8adf1a15816b54ef8671bf14a8f96 387 Pfam PF05155 Phage X family 298 379 8.6E-13 T 12-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 PA257_2050 c46e4f0670497bae3b5a755828b27a80 267 Pfam PF04333 MlaA lipoprotein 69 262 5.0E-67 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PA257_2050 c46e4f0670497bae3b5a755828b27a80 267 PRINTS PR01805 VacJ lipoprotein signature 174 191 2.4E-24 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PA257_2050 c46e4f0670497bae3b5a755828b27a80 267 PRINTS PR01805 VacJ lipoprotein signature 70 83 2.4E-24 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PA257_2050 c46e4f0670497bae3b5a755828b27a80 267 PRINTS PR01805 VacJ lipoprotein signature 87 103 2.4E-24 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PA257_2050 c46e4f0670497bae3b5a755828b27a80 267 PRINTS PR01805 VacJ lipoprotein signature 138 155 2.4E-24 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PA257_5239 ec5ae24b4b3c6f2d03d378d154fb820a 66 Pfam PF01526 Tn3 transposase DDE domain 1 44 1.1E-12 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 Gene3D G3DSA:2.40.500.20 83 193 3.0E-44 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.8E-39 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 PIRSF PIRSF000349 1 193 3.0E-87 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 SUPERFAMILY SSF46609 1 84 1.83E-36 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 Gene3D G3DSA:1.10.287.990 20 82 8.2E-27 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 2.0E-35 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 SUPERFAMILY SSF54719 81 192 9.17E-46 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.6E-23 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 3.6E-23 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.6E-23 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.6E-23 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5431 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 3.6E-23 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_3629 103c404f40918dda6f2b04a688adb188 158 Pfam PF13628 Domain of unknown function (DUF4142) 24 152 9.4E-22 T 12-10-2018 IPR025419 Domain of unknown function DUF4142 PA257_2823 8bc7cc5c3df11878131fdd95af7124b7 130 SUPERFAMILY SSF51316 3 123 1.78E-36 T 12-10-2018 IPR011057 Mss4-like superfamily PA257_2823 8bc7cc5c3df11878131fdd95af7124b7 130 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 102 1.6E-17 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PA257_2823 8bc7cc5c3df11878131fdd95af7124b7 130 Gene3D G3DSA:2.170.150.70 4 104 3.0E-10 T 12-10-2018 PA257_0672 1f086188f7362b4ea0be1fa7bb001f16 393 Gene3D G3DSA:3.40.640.10 53 291 2.2E-113 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_0672 1f086188f7362b4ea0be1fa7bb001f16 393 Gene3D G3DSA:3.90.1150.10 20 375 2.2E-113 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_0672 1f086188f7362b4ea0be1fa7bb001f16 393 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 210 247 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0672 1f086188f7362b4ea0be1fa7bb001f16 393 PIRSF PIRSF000521 3 143 1.7E-5 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0672 1f086188f7362b4ea0be1fa7bb001f16 393 PIRSF PIRSF000521 157 385 3.2E-27 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0672 1f086188f7362b4ea0be1fa7bb001f16 393 Pfam PF00202 Aminotransferase class-III 19 382 6.3E-80 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_0672 1f086188f7362b4ea0be1fa7bb001f16 393 SUPERFAMILY SSF53383 15 384 2.75E-101 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_2096 24b216021b420ea743299ed75353efb6 295 Gene3D G3DSA:3.20.20.140 3 253 5.5E-78 T 12-10-2018 PA257_2096 24b216021b420ea743299ed75353efb6 295 SMART SM00481 3 68 1.1E-17 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal PA257_2096 24b216021b420ea743299ed75353efb6 295 Pfam PF02811 PHP domain 4 71 4.3E-10 T 12-10-2018 IPR004013 PHP domain GO:0003824 PA257_2096 24b216021b420ea743299ed75353efb6 295 SUPERFAMILY SSF89550 1 276 4.12E-50 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PA257_2096 24b216021b420ea743299ed75353efb6 295 Gene3D G3DSA:1.10.150.650 96 172 5.5E-78 T 12-10-2018 PA257_3301 2d864f3c293c714b072aa7625b0f65f1 310 Gene3D G3DSA:3.40.1190.20 2 310 2.2E-67 T 12-10-2018 IPR029056 Ribokinase-like PA257_3301 2d864f3c293c714b072aa7625b0f65f1 310 SUPERFAMILY SSF53613 3 305 1.71E-57 T 12-10-2018 IPR029056 Ribokinase-like PA257_3301 2d864f3c293c714b072aa7625b0f65f1 310 Pfam PF00294 pfkB family carbohydrate kinase 4 304 8.9E-29 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB PA257_1561 fc266c6cb3e6021e682136c03518a9ba 553 Gene3D G3DSA:1.20.1530.20 1 344 1.0E-11 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_1561 fc266c6cb3e6021e682136c03518a9ba 553 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 545 2.8E-127 T 12-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 PA257_1561 fc266c6cb3e6021e682136c03518a9ba 553 Pfam PF00999 Sodium/hydrogen exchanger family 7 419 2.6E-84 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PA257_5498 1acd546b26186a8fcea95546d5b85464 148 PRINTS PR00162 Rieske 2Fe-2S subunit signature 101 113 1.2E-9 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PA257_5498 1acd546b26186a8fcea95546d5b85464 148 PRINTS PR00162 Rieske 2Fe-2S subunit signature 114 126 1.2E-9 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PA257_5498 1acd546b26186a8fcea95546d5b85464 148 PRINTS PR00162 Rieske 2Fe-2S subunit signature 70 81 1.2E-9 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PA257_5498 1acd546b26186a8fcea95546d5b85464 148 Pfam PF00355 Rieske [2Fe-2S] domain 65 129 1.1E-10 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PA257_5498 1acd546b26186a8fcea95546d5b85464 148 Gene3D G3DSA:2.102.10.10 1 142 2.3E-47 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_5498 1acd546b26186a8fcea95546d5b85464 148 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 1 142 9.0E-55 T 12-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PA257_5498 1acd546b26186a8fcea95546d5b85464 148 SUPERFAMILY SSF50022 2 141 4.33E-38 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_3690 386043b2d58da385595c0a95725deebf 624 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 46 205 2.4E-26 T 12-10-2018 IPR024618 Domain of unknown function DUF3857 PA257_3690 386043b2d58da385595c0a95725deebf 624 Gene3D G3DSA:3.10.620.30 246 379 7.0E-28 T 12-10-2018 PA257_3690 386043b2d58da385595c0a95725deebf 624 Pfam PF01841 Transglutaminase-like superfamily 265 334 1.2E-6 T 12-10-2018 IPR002931 Transglutaminase-like PA257_3690 386043b2d58da385595c0a95725deebf 624 SUPERFAMILY SSF54001 266 420 3.93E-12 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_2949 f59b35d24b7c6bd272aebefa379b2494 101 SUPERFAMILY SSF75169 4 100 1.77E-24 T 12-10-2018 IPR027396 DsrEFH-like PA257_2949 f59b35d24b7c6bd272aebefa379b2494 101 Gene3D G3DSA:3.40.1260.10 2 101 5.2E-28 T 12-10-2018 IPR027396 DsrEFH-like PA257_2949 f59b35d24b7c6bd272aebefa379b2494 101 Pfam PF04077 DsrH like protein 10 97 1.8E-23 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 PA257_2949 f59b35d24b7c6bd272aebefa379b2494 101 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 5 100 5.1E-29 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 PA257_0339 8978c0249a36cf43c58494ee52ee73b7 228 SMART SM00100 16 134 2.3E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_0339 8978c0249a36cf43c58494ee52ee73b7 228 SUPERFAMILY SSF51206 11 141 6.42E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like PA257_0339 8978c0249a36cf43c58494ee52ee73b7 228 SMART SM00419 170 218 3.0E-8 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_0339 8978c0249a36cf43c58494ee52ee73b7 228 Gene3D G3DSA:2.60.120.10 8 155 6.8E-29 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_0339 8978c0249a36cf43c58494ee52ee73b7 228 Gene3D G3DSA:1.10.10.10 156 227 5.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0339 8978c0249a36cf43c58494ee52ee73b7 228 Pfam PF13545 Crp-like helix-turn-helix domain 154 224 3.4E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PA257_0339 8978c0249a36cf43c58494ee52ee73b7 228 SUPERFAMILY SSF46785 152 225 1.82E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0339 8978c0249a36cf43c58494ee52ee73b7 228 Pfam PF00027 Cyclic nucleotide-binding domain 35 121 7.2E-20 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain PA257_1097 bdabc59ef86cebeec4adebf4aa60e3a6 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 16 151 8.4E-54 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_1097 bdabc59ef86cebeec4adebf4aa60e3a6 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 155 30.962 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_1097 bdabc59ef86cebeec4adebf4aa60e3a6 158 Gene3D G3DSA:3.40.50.960 3 157 1.7E-59 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_1097 bdabc59ef86cebeec4adebf4aa60e3a6 158 SUPERFAMILY SSF52121 5 155 7.2E-61 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_1097 bdabc59ef86cebeec4adebf4aa60e3a6 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 152 1.7E-56 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PA257_3605 974d7a29887cfda5d4c02328e2ac9288 408 SUPERFAMILY SSF52402 5 243 3.77E-39 T 12-10-2018 PA257_3605 974d7a29887cfda5d4c02328e2ac9288 408 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 158 245 3.2E-7 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 PA257_3605 974d7a29887cfda5d4c02328e2ac9288 408 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 79 8.5E-6 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 PA257_3605 974d7a29887cfda5d4c02328e2ac9288 408 Pfam PF11922 Domain of unknown function (DUF3440) 247 348 8.8E-26 T 12-10-2018 IPR021845 Protein of unknown function DUF3440 PA257_0897 4545a64fc437be8b37126c3b13f3854e 593 Gene3D G3DSA:2.40.110.10 162 282 1.8E-93 T 12-10-2018 PA257_0897 4545a64fc437be8b37126c3b13f3854e 593 SUPERFAMILY SSF56645 38 281 2.62E-56 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_0897 4545a64fc437be8b37126c3b13f3854e 593 Gene3D G3DSA:1.10.540.10 46 161 1.8E-93 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_0897 4545a64fc437be8b37126c3b13f3854e 593 SUPERFAMILY SSF47203 289 459 2.09E-47 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_0897 4545a64fc437be8b37126c3b13f3854e 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.2E-17 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_0897 4545a64fc437be8b37126c3b13f3854e 593 Gene3D G3DSA:1.20.140.10 283 450 1.8E-93 T 12-10-2018 PA257_0897 4545a64fc437be8b37126c3b13f3854e 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 43 158 4.2E-11 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_0897 4545a64fc437be8b37126c3b13f3854e 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 3.7E-11 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PA257_0897 4545a64fc437be8b37126c3b13f3854e 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 3.0E-21 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_0897 4545a64fc437be8b37126c3b13f3854e 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 587 1.1E-34 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PA257_5160 d0174c97871f316c995d38b21e97059c 231 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 227 41.65 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PA257_5160 d0174c97871f316c995d38b21e97059c 231 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 64 73 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PA257_5160 d0174c97871f316c995d38b21e97059c 231 SMART SM00987 56 216 1.2E-38 T 12-10-2018 PA257_5160 d0174c97871f316c995d38b21e97059c 231 SUPERFAMILY SSF52141 9 228 1.09E-95 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PA257_5160 d0174c97871f316c995d38b21e97059c 231 Gene3D G3DSA:3.40.470.10 1 230 1.6E-104 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PA257_5160 d0174c97871f316c995d38b21e97059c 231 SMART SM00986 56 216 1.2E-38 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PA257_5160 d0174c97871f316c995d38b21e97059c 231 Pfam PF03167 Uracil DNA glycosylase superfamily 60 215 6.2E-25 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PA257_5160 d0174c97871f316c995d38b21e97059c 231 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 12 220 4.6E-84 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PA257_1236 3748ca3e1a7eb42f10777e4c630a0221 455 Pfam PF07044 Protein of unknown function (DUF1329) 85 450 2.0E-158 T 12-10-2018 IPR010752 Protein of unknown function DUF1329 PA257_4366 e80f32f15158f9f4c63a7d0809846cb1 143 SUPERFAMILY SSF55729 1 142 1.89E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_4366 e80f32f15158f9f4c63a7d0809846cb1 143 Gene3D G3DSA:3.40.630.30 1 143 3.9E-38 T 12-10-2018 PA257_4366 e80f32f15158f9f4c63a7d0809846cb1 143 Pfam PF13673 Acetyltransferase (GNAT) domain 50 130 3.0E-16 T 12-10-2018 IPR000182 GNAT domain PA257_4871 4430d897f9d60e4532dc991a68933bff 201 Gene3D G3DSA:1.10.150.20 67 140 1.7E-26 T 12-10-2018 PA257_4871 4430d897f9d60e4532dc991a68933bff 201 Gene3D G3DSA:2.40.50.140 1 66 4.2E-29 T 12-10-2018 PA257_4871 4430d897f9d60e4532dc991a68933bff 201 SUPERFAMILY SSF50249 2 63 5.71E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_4871 4430d897f9d60e4532dc991a68933bff 201 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.3E-18 T 12-10-2018 PA257_4871 4430d897f9d60e4532dc991a68933bff 201 Pfam PF07499 RuvA, C-terminal domain 157 200 1.7E-15 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PA257_4871 4430d897f9d60e4532dc991a68933bff 201 SUPERFAMILY SSF46929 156 200 1.2E-10 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily PA257_4871 4430d897f9d60e4532dc991a68933bff 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 199 3.2E-61 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PA257_4871 4430d897f9d60e4532dc991a68933bff 201 Pfam PF01330 RuvA N terminal domain 2 62 1.7E-22 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 PA257_4871 4430d897f9d60e4532dc991a68933bff 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 31.777 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PA257_4871 4430d897f9d60e4532dc991a68933bff 201 SMART SM00278 108 127 0.017 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PA257_4871 4430d897f9d60e4532dc991a68933bff 201 SMART SM00278 73 92 0.72 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PA257_4871 4430d897f9d60e4532dc991a68933bff 201 Gene3D G3DSA:1.10.8.10 154 201 1.5E-19 T 12-10-2018 PA257_4871 4430d897f9d60e4532dc991a68933bff 201 SUPERFAMILY SSF47781 66 137 2.54E-22 T 12-10-2018 IPR010994 RuvA domain 2-like PA257_0150 af5c54ae48a57f40bf7dc2f3759b7e3a 166 Gene3D G3DSA:2.60.40.1820 42 154 8.3E-10 T 12-10-2018 PA257_0150 af5c54ae48a57f40bf7dc2f3759b7e3a 166 Pfam PF03168 Late embryogenesis abundant protein 54 146 1.3E-21 T 12-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup PA257_0150 af5c54ae48a57f40bf7dc2f3759b7e3a 166 SUPERFAMILY SSF117070 12 153 1.02E-30 T 12-10-2018 PA257_0150 af5c54ae48a57f40bf7dc2f3759b7e3a 166 SMART SM00769 34 154 2.0E-46 T 12-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 PA257_6975 2b9745370112926b6095dad6395b2eab 135 SUPERFAMILY SSF54211 6 115 3.29E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_6975 2b9745370112926b6095dad6395b2eab 135 Pfam PF00825 Ribonuclease P 6 113 3.6E-31 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PA257_6975 2b9745370112926b6095dad6395b2eab 135 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 113 1.4E-26 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PA257_6975 2b9745370112926b6095dad6395b2eab 135 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 PA257_6975 2b9745370112926b6095dad6395b2eab 135 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 92 2.0E-37 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PA257_6975 2b9745370112926b6095dad6395b2eab 135 Gene3D G3DSA:3.30.230.10 2 119 3.0E-38 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_6975 2b9745370112926b6095dad6395b2eab 135 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 116 17.757 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PA257_4301 4be7f8f3885a4e1e2019931ddd166ebc 118 Gene3D G3DSA:3.40.50.10400 1 118 8.3E-51 T 12-10-2018 IPR027269 Hypothetical PA1492 domain superfamily PA257_4301 4be7f8f3885a4e1e2019931ddd166ebc 118 Pfam PF09152 Domain of unknown function (DUF1937) 2 112 4.3E-49 T 12-10-2018 IPR015235 Domain of unknown function DUF1937 PA257_4301 4be7f8f3885a4e1e2019931ddd166ebc 118 SUPERFAMILY SSF52309 1 117 2.38E-42 T 12-10-2018 PA257_5391 8f6f2fbf55583b94e0cfa6ffc4c89674 268 Pfam PF13174 Tetratricopeptide repeat 94 128 0.0024 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PA257_5391 8f6f2fbf55583b94e0cfa6ffc4c89674 268 SUPERFAMILY SSF81901 71 241 9.42E-6 T 12-10-2018 PA257_6862 8e9e0bd4d506477208da1f46fe0ee617 97 Pfam PF09498 Protein of unknown function (DUF2388) 28 96 3.1E-31 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_6862 8e9e0bd4d506477208da1f46fe0ee617 97 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 97 1.1E-38 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_5050 748207c8154bbda66e71a606f6292773 110 Pfam PF05106 Phage holin family (Lysis protein S) 5 100 7.7E-30 T 12-10-2018 IPR006481 Bacteriophage lambda, GpS, holin PA257_5050 748207c8154bbda66e71a606f6292773 110 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 2 102 1.2E-26 T 12-10-2018 IPR006481 Bacteriophage lambda, GpS, holin PA257_4984 1a82b94403ad8f07e3743ae6630bb1ef 262 Pfam PF02311 AraC-like ligand binding domain 24 109 8.2E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PA257_4984 1a82b94403ad8f07e3743ae6630bb1ef 262 SUPERFAMILY SSF46689 210 257 3.36E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4984 1a82b94403ad8f07e3743ae6630bb1ef 262 SMART SM00342 172 253 1.2E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4984 1a82b94403ad8f07e3743ae6630bb1ef 262 Gene3D G3DSA:1.10.10.60 157 259 2.7E-21 T 12-10-2018 PA257_4984 1a82b94403ad8f07e3743ae6630bb1ef 262 Pfam PF12833 Helix-turn-helix domain 178 254 8.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4984 1a82b94403ad8f07e3743ae6630bb1ef 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 249 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_4984 1a82b94403ad8f07e3743ae6630bb1ef 262 SUPERFAMILY SSF51182 14 177 3.26E-14 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4984 1a82b94403ad8f07e3743ae6630bb1ef 262 Gene3D G3DSA:2.60.120.10 10 99 3.6E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1464 50f9b45141fe090f1ae54922d3370156 203 SUPERFAMILY SSF55811 10 178 2.84E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_1464 50f9b45141fe090f1ae54922d3370156 203 Gene3D G3DSA:3.90.79.10 2 183 1.9E-48 T 12-10-2018 PA257_1464 50f9b45141fe090f1ae54922d3370156 203 Pfam PF00293 NUDIX domain 28 136 5.8E-11 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_5941 059e15ea857ea23aa1159cdbeaaa7fd2 467 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 215 276 1.2E-20 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PA257_5941 059e15ea857ea23aa1159cdbeaaa7fd2 467 Gene3D G3DSA:1.10.3090.10 186 433 2.6E-94 T 12-10-2018 PA257_5941 059e15ea857ea23aa1159cdbeaaa7fd2 467 Pfam PF12626 Polymerase A arginine-rich C-terminus 330 446 2.9E-44 T 12-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain PA257_5941 059e15ea857ea23aa1159cdbeaaa7fd2 467 Pfam PF01743 Poly A polymerase head domain 56 188 7.5E-38 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PA257_5941 059e15ea857ea23aa1159cdbeaaa7fd2 467 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 457 2.9E-184 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 PA257_5941 059e15ea857ea23aa1159cdbeaaa7fd2 467 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 13 459 38.005 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 PA257_5941 059e15ea857ea23aa1159cdbeaaa7fd2 467 SUPERFAMILY SSF81301 29 185 2.4E-39 T 12-10-2018 PA257_5941 059e15ea857ea23aa1159cdbeaaa7fd2 467 Gene3D G3DSA:3.30.460.10 23 184 2.6E-58 T 12-10-2018 PA257_5941 059e15ea857ea23aa1159cdbeaaa7fd2 467 SUPERFAMILY SSF81891 186 421 1.29E-50 T 12-10-2018 PA257_1494 3802ccb3d77506d1b6d5cb7034cd69ea 179 SUPERFAMILY SSF52980 2 177 2.95E-62 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PA257_1494 3802ccb3d77506d1b6d5cb7034cd69ea 179 SMART SM01322 1 174 1.0E-93 T 12-10-2018 IPR009822 YaeQ PA257_1494 3802ccb3d77506d1b6d5cb7034cd69ea 179 Pfam PF07152 YaeQ protein 1 171 4.4E-62 T 12-10-2018 IPR009822 YaeQ PA257_1494 3802ccb3d77506d1b6d5cb7034cd69ea 179 PIRSF PIRSF011484 1 178 9.1E-52 T 12-10-2018 IPR009822 YaeQ PA257_1494 3802ccb3d77506d1b6d5cb7034cd69ea 179 Gene3D G3DSA:3.10.640.10 1 177 5.5E-67 T 12-10-2018 IPR038590 YaeQ superfamily PA257_5691 354d5c0e342b9217864a3181a943993d 73 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 1 65 1.2E-24 T 12-10-2018 IPR019110 Uncharacterised protein family, RAQPRD PA257_5691 354d5c0e342b9217864a3181a943993d 73 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 1 66 7.5E-29 T 12-10-2018 IPR019110 Uncharacterised protein family, RAQPRD PA257_3700 59c01fb8ba191b0f52e90fc77d99aa98 173 Pfam PF08241 Methyltransferase domain 80 116 2.3E-4 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PA257_3700 59c01fb8ba191b0f52e90fc77d99aa98 173 SUPERFAMILY SSF53335 23 153 8.93E-11 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3700 59c01fb8ba191b0f52e90fc77d99aa98 173 Gene3D G3DSA:3.40.50.150 14 162 1.1E-10 T 12-10-2018 PA257_0868 3474be992cc7a5c63542e69d81de5d92 296 SUPERFAMILY SSF46689 198 248 5.29E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0868 3474be992cc7a5c63542e69d81de5d92 296 SMART SM00342 214 296 2.6E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0868 3474be992cc7a5c63542e69d81de5d92 296 Gene3D G3DSA:1.10.10.60 194 296 1.6E-25 T 12-10-2018 PA257_0868 3474be992cc7a5c63542e69d81de5d92 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 292 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_0868 3474be992cc7a5c63542e69d81de5d92 296 SUPERFAMILY SSF46689 250 296 3.05E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0868 3474be992cc7a5c63542e69d81de5d92 296 Pfam PF12833 Helix-turn-helix domain 220 296 1.1E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_6569 bcfd1cbb5ccd99bad38e125f4cffb62c 332 Gene3D G3DSA:3.40.190.10 124 330 3.2E-117 T 12-10-2018 PA257_6569 bcfd1cbb5ccd99bad38e125f4cffb62c 332 SUPERFAMILY SSF53850 24 328 1.84E-79 T 12-10-2018 PA257_6569 bcfd1cbb5ccd99bad38e125f4cffb62c 332 Gene3D G3DSA:3.40.190.10 27 295 3.2E-117 T 12-10-2018 PA257_6569 bcfd1cbb5ccd99bad38e125f4cffb62c 332 Pfam PF13343 Bacterial extracellular solute-binding protein 71 297 2.0E-21 T 12-10-2018 PA257_6569 bcfd1cbb5ccd99bad38e125f4cffb62c 332 PIRSF PIRSF002825 1 332 3.4E-107 T 12-10-2018 IPR026045 Ferric binding protein PA257_1334 b5a38b850b5ebfcb586fc5ade6f9a789 142 Gene3D G3DSA:3.40.50.10110 1 139 1.3E-46 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily PA257_1334 b5a38b850b5ebfcb586fc5ade6f9a789 142 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 135 3.0E-38 T 12-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PA257_1334 b5a38b850b5ebfcb586fc5ade6f9a789 142 SUPERFAMILY SSF102400 2 139 1.57E-42 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily PA257_1512 95ffa4c25c5e188db3780c067b8b78a3 539 SUPERFAMILY SSF103473 19 535 3.49E-61 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1512 95ffa4c25c5e188db3780c067b8b78a3 539 Pfam PF00083 Sugar (and other) transporter 25 333 7.6E-31 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PA257_1512 95ffa4c25c5e188db3780c067b8b78a3 539 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 321 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_1512 95ffa4c25c5e188db3780c067b8b78a3 539 Gene3D G3DSA:1.20.1250.20 414 539 1.9E-7 T 12-10-2018 PA257_1512 95ffa4c25c5e188db3780c067b8b78a3 539 Gene3D G3DSA:1.20.1250.20 20 359 9.0E-59 T 12-10-2018 PA257_1512 95ffa4c25c5e188db3780c067b8b78a3 539 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_3213 5da7dd298afc17a8598ab995ae71d532 327 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 10 315 8.4E-100 T 12-10-2018 IPR013398 CRISPR-associated protein Csy2 PA257_3213 5da7dd298afc17a8598ab995ae71d532 327 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 9 315 6.9E-90 T 12-10-2018 IPR013398 CRISPR-associated protein Csy2 PA257_5288 6d5905bc15048cb7a80eb3e4dc709306 168 Pfam PF13527 Acetyltransferase (GNAT) domain 5 129 2.5E-11 T 12-10-2018 PA257_5288 6d5905bc15048cb7a80eb3e4dc709306 168 Gene3D G3DSA:3.40.630.30 1 166 1.2E-46 T 12-10-2018 PA257_5288 6d5905bc15048cb7a80eb3e4dc709306 168 SUPERFAMILY SSF55729 1 149 1.05E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_1288 81f373d3dac4392417497c6a8a010025 431 Gene3D G3DSA:1.20.1250.20 2 186 2.6E-48 T 12-10-2018 PA257_1288 81f373d3dac4392417497c6a8a010025 431 Pfam PF07690 Major Facilitator Superfamily 17 368 8.4E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1288 81f373d3dac4392417497c6a8a010025 431 Gene3D G3DSA:1.20.1250.20 196 416 3.9E-52 T 12-10-2018 PA257_1288 81f373d3dac4392417497c6a8a010025 431 SUPERFAMILY SSF103473 5 412 3.79E-65 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4687 a46473dfa6c0e5b984a3fca751fbbf4d 106 Pfam PF09634 Protein of unknown function (DUF2025) 1 105 5.0E-58 T 12-10-2018 IPR023117 PA1123-like domain PA257_4687 a46473dfa6c0e5b984a3fca751fbbf4d 106 Gene3D G3DSA:3.90.1650.10 1 106 2.5E-65 T 12-10-2018 IPR036808 PA1123-like superfamily PA257_4687 a46473dfa6c0e5b984a3fca751fbbf4d 106 SUPERFAMILY SSF160477 1 105 4.05E-55 T 12-10-2018 IPR036808 PA1123-like superfamily PA257_6549 76b6eb5280add0950e381fc6160ab8df 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 55.391 T 12-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK PA257_6549 76b6eb5280add0950e381fc6160ab8df 301 Gene3D G3DSA:3.30.470.80 182 296 2.3E-42 T 12-10-2018 PA257_6549 76b6eb5280add0950e381fc6160ab8df 301 Gene3D G3DSA:3.30.1490.20 115 181 1.5E-26 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_6549 76b6eb5280add0950e381fc6160ab8df 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 285 8.0E-87 T 12-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 PA257_6549 76b6eb5280add0950e381fc6160ab8df 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 9.9E-69 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 PA257_6549 76b6eb5280add0950e381fc6160ab8df 301 Gene3D G3DSA:3.40.50.20 1 114 6.6E-39 T 12-10-2018 PA257_6549 76b6eb5280add0950e381fc6160ab8df 301 SUPERFAMILY SSF56059 98 288 9.43E-50 T 12-10-2018 PA257_5400 87ad753fcd26ce9781b1b71378de7979 193 Gene3D G3DSA:3.40.50.880 1 193 7.6E-56 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_5400 87ad753fcd26ce9781b1b71378de7979 193 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 187 3.5E-56 T 12-10-2018 IPR006286 Deglycase PfpI PA257_5400 87ad753fcd26ce9781b1b71378de7979 193 Pfam PF01965 DJ-1/PfpI family 4 185 3.4E-50 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_5400 87ad753fcd26ce9781b1b71378de7979 193 SUPERFAMILY SSF52317 4 188 6.88E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4069 aadb53faffec1230e31ca6fc10fb14a1 98 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 9 98 2.9E-41 T 12-10-2018 IPR009863 Type III secretion protein, LcrG PA257_4069 aadb53faffec1230e31ca6fc10fb14a1 98 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 9 98 1.0E-13 T 12-10-2018 IPR009863 Type III secretion protein, LcrG PA257_4069 aadb53faffec1230e31ca6fc10fb14a1 98 Pfam PF07216 LcrG protein 9 98 4.6E-41 T 12-10-2018 IPR009863 Type III secretion protein, LcrG PA257_3347 ff862c18051adda60fa3be6b22538987 81 Pfam PF13187 4Fe-4S dicluster domain 28 71 1.9E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_3347 ff862c18051adda60fa3be6b22538987 81 SUPERFAMILY SSF54862 9 74 1.47E-14 T 12-10-2018 PA257_3347 ff862c18051adda60fa3be6b22538987 81 Gene3D G3DSA:3.30.70.20 15 76 5.1E-17 T 12-10-2018 PA257_3347 ff862c18051adda60fa3be6b22538987 81 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_2311 00e405631ec38beed33f9db88fcb8154 75 Pfam PF04400 (Na+)-NQR maturation NqrM 21 59 4.8E-14 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 Pfam PF13416 Bacterial extracellular solute-binding protein 40 326 2.7E-27 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 Gene3D G3DSA:3.40.190.10 26 329 6.3E-113 T 12-10-2018 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 Gene3D G3DSA:3.40.190.10 130 355 6.3E-113 T 12-10-2018 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 PIRSF PIRSF019574 1 361 1.6E-108 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 SUPERFAMILY SSF53850 23 358 1.66E-82 T 12-10-2018 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 151 165 1.6E-50 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 1.6E-50 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 121 137 1.6E-50 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 260 279 1.6E-50 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 1.6E-50 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 1.6E-50 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 305 331 1.6E-50 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 1.6E-50 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_4578 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 1.6E-50 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0383 0ed828df8e2dd68b41ea2741a1847bfd 145 Pfam PF14347 Domain of unknown function (DUF4399) 54 145 1.0E-39 T 12-10-2018 IPR025512 Domain of unknown function DUF4399 PA257_6874 89fb52c9fe86eff00d43cb1a6554156d 582 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 521 4.0E-116 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 PA257_6874 89fb52c9fe86eff00d43cb1a6554156d 582 Gene3D G3DSA:1.20.58.220 333 433 2.0E-12 T 12-10-2018 IPR038078 PhoU-like domain superfamily PA257_6874 89fb52c9fe86eff00d43cb1a6554156d 582 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 1.8E-106 T 12-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 PA257_6874 89fb52c9fe86eff00d43cb1a6554156d 582 Pfam PF02690 Na+/Pi-cotransporter 13 147 2.0E-35 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 PA257_6874 89fb52c9fe86eff00d43cb1a6554156d 582 Pfam PF02690 Na+/Pi-cotransporter 158 258 1.2E-8 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 PA257_6874 89fb52c9fe86eff00d43cb1a6554156d 582 Pfam PF01895 PhoU domain 340 422 9.2E-12 T 12-10-2018 IPR026022 PhoU domain PA257_6874 89fb52c9fe86eff00d43cb1a6554156d 582 SUPERFAMILY SSF109755 320 532 3.66E-35 T 12-10-2018 PA257_3345 f697eb40c4b5cacff4a182d68d20a847 249 SMART SM00866 96 236 2.4E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_3345 f697eb40c4b5cacff4a182d68d20a847 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.5E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_3345 f697eb40c4b5cacff4a182d68d20a847 249 Gene3D G3DSA:1.10.10.10 10 78 5.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3345 f697eb40c4b5cacff4a182d68d20a847 249 Pfam PF07702 UTRA domain 97 236 4.7E-37 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_3345 f697eb40c4b5cacff4a182d68d20a847 249 SUPERFAMILY SSF64288 63 243 2.04E-47 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_3345 f697eb40c4b5cacff4a182d68d20a847 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 8.7E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_3345 f697eb40c4b5cacff4a182d68d20a847 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 8.7E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_3345 f697eb40c4b5cacff4a182d68d20a847 249 SMART SM00345 16 75 5.5E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_3345 f697eb40c4b5cacff4a182d68d20a847 249 Gene3D G3DSA:3.40.1410.10 79 245 8.5E-43 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_3345 f697eb40c4b5cacff4a182d68d20a847 249 SUPERFAMILY SSF46785 7 79 2.19E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5505 0ed0ee5e702838f652009009a6127f7e 364 SUPERFAMILY SSF52540 53 197 3.84E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5505 0ed0ee5e702838f652009009a6127f7e 364 Gene3D G3DSA:3.40.50.300 7 186 2.4E-19 T 12-10-2018 PA257_5505 0ed0ee5e702838f652009009a6127f7e 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 364 54.614 T 12-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 PA257_5505 0ed0ee5e702838f652009009a6127f7e 364 Pfam PF03969 AFG1-like ATPase 1 360 1.1E-169 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 PA257_1322 d18c55d1cbf3e7c36662c63675a2183a 330 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 12-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PA257_1322 d18c55d1cbf3e7c36662c63675a2183a 330 Gene3D G3DSA:3.90.180.10 8 314 5.4E-98 T 12-10-2018 PA257_1322 d18c55d1cbf3e7c36662c63675a2183a 330 SUPERFAMILY SSF50129 1 148 6.85E-40 T 12-10-2018 IPR011032 GroES-like superfamily PA257_1322 d18c55d1cbf3e7c36662c63675a2183a 330 SUPERFAMILY SSF51735 116 285 9.17E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1322 d18c55d1cbf3e7c36662c63675a2183a 330 SMART SM00829 10 316 7.7E-39 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PA257_1322 d18c55d1cbf3e7c36662c63675a2183a 330 Pfam PF13602 Zinc-binding dehydrogenase 186 315 9.0E-27 T 12-10-2018 PA257_1322 d18c55d1cbf3e7c36662c63675a2183a 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 99 5.0E-13 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PA257_1322 d18c55d1cbf3e7c36662c63675a2183a 330 Gene3D G3DSA:3.40.50.720 124 284 5.4E-98 T 12-10-2018 PA257_4859 d463b704ab2b1063099c5906f01a819d 427 Pfam PF00589 Phage integrase family 145 296 4.9E-24 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_4859 d463b704ab2b1063099c5906f01a819d 427 Gene3D G3DSA:1.10.443.10 127 320 1.4E-31 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_4859 d463b704ab2b1063099c5906f01a819d 427 Gene3D G3DSA:1.10.150.130 1 108 9.5E-9 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_4859 d463b704ab2b1063099c5906f01a819d 427 SUPERFAMILY SSF56349 1 303 9.12E-40 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 SUPERFAMILY SSF55008 17 89 1.23E-22 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 91 5.4E-45 T 12-10-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 Pfam PF00403 Heavy-metal-associated domain 25 85 7.8E-17 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 3.3E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 3.3E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 3.3E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 3.3E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 3.3E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 3.3E-58 T 12-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 Gene3D G3DSA:3.30.70.100 20 91 4.7E-24 T 12-10-2018 PA257_2587 6dcfeae12c67bd8e0efcc9169ccaf92d 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PA257_1676 ef7599314c074e7cd695dcd1eda38f94 271 SUPERFAMILY SSF56317 1 251 5.62E-70 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_1676 ef7599314c074e7cd695dcd1eda38f94 271 Gene3D G3DSA:3.60.110.10 1 258 3.1E-73 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_1676 ef7599314c074e7cd695dcd1eda38f94 271 Pfam PF00795 Carbon-nitrogen hydrolase 5 242 4.7E-49 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PA257_4980 11ea892646418828f5751d37ba9fc154 127 Gene3D G3DSA:2.40.128.200 41 127 2.8E-31 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily PA257_4980 11ea892646418828f5751d37ba9fc154 127 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 49 115 2.2E-21 T 12-10-2018 IPR018660 C-type lysozyme inhibitor PA257_4980 11ea892646418828f5751d37ba9fc154 127 SUPERFAMILY SSF141488 43 117 1.83E-20 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily PA257_5543 180cb7b17295af8c10ba1bc96ee9ee8a 282 Gene3D G3DSA:3.60.110.10 1 271 1.2E-88 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_5543 180cb7b17295af8c10ba1bc96ee9ee8a 282 Pfam PF00795 Carbon-nitrogen hydrolase 3 258 1.6E-51 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PA257_5543 180cb7b17295af8c10ba1bc96ee9ee8a 282 SUPERFAMILY SSF56317 1 268 4.58E-76 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_5543 180cb7b17295af8c10ba1bc96ee9ee8a 282 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site PA257_4091 4946816ba9149f85a011cc6e84ad9e68 181 Pfam PF03079 ARD/ARD' family 6 165 8.5E-36 T 12-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 PA257_4091 4946816ba9149f85a011cc6e84ad9e68 181 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 39.744 T 12-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 PA257_4091 4946816ba9149f85a011cc6e84ad9e68 181 Gene3D G3DSA:2.60.120.10 2 157 4.4E-56 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4091 4946816ba9149f85a011cc6e84ad9e68 181 SUPERFAMILY SSF51182 1 179 4.86E-42 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_1370 50ea76059b6420598c1c230a32577e0c 382 Gene3D G3DSA:3.90.1150.10 14 379 1.3E-135 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_1370 50ea76059b6420598c1c230a32577e0c 382 Pfam PF00155 Aminotransferase class I and II 27 379 1.9E-61 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_1370 50ea76059b6420598c1c230a32577e0c 382 Gene3D G3DSA:3.40.640.10 39 278 1.3E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_1370 50ea76059b6420598c1c230a32577e0c 382 SUPERFAMILY SSF53383 3 380 1.33E-103 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3529 a68c812d8200010711dcf552409e43db 531 Pfam PF00563 EAL domain 281 513 2.9E-55 T 12-10-2018 IPR001633 EAL domain PA257_3529 a68c812d8200010711dcf552409e43db 531 SUPERFAMILY SSF141868 281 527 5.1E-66 T 12-10-2018 IPR035919 EAL domain superfamily PA257_3529 a68c812d8200010711dcf552409e43db 531 SMART SM00052 274 519 2.5E-71 T 12-10-2018 IPR001633 EAL domain PA257_3529 a68c812d8200010711dcf552409e43db 531 Gene3D G3DSA:3.20.20.450 277 529 1.1E-71 T 12-10-2018 IPR035919 EAL domain superfamily PA257_3529 a68c812d8200010711dcf552409e43db 531 Pfam PF12792 CSS motif domain associated with EAL 46 242 7.8E-30 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PA257_6697 b079f00f4a6655069fefbbef7724e8bb 444 SUPERFAMILY SSF53383 4 441 3.13E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6697 b079f00f4a6655069fefbbef7724e8bb 444 Gene3D G3DSA:3.40.640.10 64 345 4.7E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6697 b079f00f4a6655069fefbbef7724e8bb 444 Gene3D G3DSA:3.90.1150.10 28 435 4.7E-145 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_6697 b079f00f4a6655069fefbbef7724e8bb 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_6697 b079f00f4a6655069fefbbef7724e8bb 444 Pfam PF00202 Aminotransferase class-III 30 440 8.6E-90 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_4810 465125fe8fd2545f1b0f1c6b4c3afac3 266 SUPERFAMILY SSF46785 15 86 4.17E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4810 465125fe8fd2545f1b0f1c6b4c3afac3 266 SMART SM00346 15 104 1.7E-12 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_4810 465125fe8fd2545f1b0f1c6b4c3afac3 266 Gene3D G3DSA:3.30.450.40 89 258 3.8E-24 T 12-10-2018 IPR029016 GAF-like domain superfamily PA257_4810 465125fe8fd2545f1b0f1c6b4c3afac3 266 Gene3D G3DSA:1.10.10.10 13 87 6.7E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4810 465125fe8fd2545f1b0f1c6b4c3afac3 266 SUPERFAMILY SSF55781 73 255 7.85E-26 T 12-10-2018 PA257_4810 465125fe8fd2545f1b0f1c6b4c3afac3 266 Pfam PF01614 Bacterial transcriptional regulator 134 253 2.7E-10 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal PA257_4810 465125fe8fd2545f1b0f1c6b4c3afac3 266 Pfam PF09339 IclR helix-turn-helix domain 17 65 1.4E-12 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PA257_6309 d5e3c55cb67a5c9d14932388998bec24 278 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 276 6.3E-112 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PA257_6309 d5e3c55cb67a5c9d14932388998bec24 278 Gene3D G3DSA:3.40.50.150 1 278 8.8E-105 T 12-10-2018 PA257_6309 d5e3c55cb67a5c9d14932388998bec24 278 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 265 39.858 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PA257_6309 d5e3c55cb67a5c9d14932388998bec24 278 SUPERFAMILY SSF53335 8 274 1.33E-89 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6671 18a14faecf1dcaee92fe42c185d51a79 452 Gene3D G3DSA:1.10.150.130 46 132 2.6E-7 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_6671 18a14faecf1dcaee92fe42c185d51a79 452 SUPERFAMILY SSF56349 178 385 8.54E-28 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_6671 18a14faecf1dcaee92fe42c185d51a79 452 Gene3D G3DSA:1.10.443.10 180 394 4.0E-27 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_6671 18a14faecf1dcaee92fe42c185d51a79 452 Pfam PF00589 Phage integrase family 184 333 3.1E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_6857 ff67715575d6d6ab22db2b59f75b111a 264 Pfam PF13489 Methyltransferase domain 28 175 1.9E-15 T 12-10-2018 PA257_6857 ff67715575d6d6ab22db2b59f75b111a 264 Gene3D G3DSA:3.40.50.150 6 181 2.1E-26 T 12-10-2018 PA257_6857 ff67715575d6d6ab22db2b59f75b111a 264 SUPERFAMILY SSF53335 23 196 3.22E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5180 31d3aeb1a13a3fd65e6c9231a3ae1f8d 354 Gene3D G3DSA:2.40.440.10 65 185 1.3E-25 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PA257_5180 31d3aeb1a13a3fd65e6c9231a3ae1f8d 354 SUPERFAMILY SSF141523 62 173 1.44E-28 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PA257_5180 31d3aeb1a13a3fd65e6c9231a3ae1f8d 354 Pfam PF03734 L,D-transpeptidase catalytic domain 66 174 2.2E-18 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PA257_5180 31d3aeb1a13a3fd65e6c9231a3ae1f8d 354 PIRSF PIRSF029342 8 346 1.4E-133 T 12-10-2018 IPR016915 Uncharacterised conserved protein UCP029342 PA257_6969 6c5948c8256910117a708182f76281d9 214 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 209 27.9 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PA257_6969 6c5948c8256910117a708182f76281d9 214 PIRSF PIRSF003078 5 214 2.8E-60 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PA257_6969 6c5948c8256910117a708182f76281d9 214 SUPERFAMILY SSF53335 14 212 3.44E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6969 6c5948c8256910117a708182f76281d9 214 Pfam PF02527 rRNA small subunit methyltransferase G 28 207 1.3E-62 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PA257_6969 6c5948c8256910117a708182f76281d9 214 Gene3D G3DSA:3.40.50.150 1 214 7.5E-68 T 12-10-2018 PA257_6969 6c5948c8256910117a708182f76281d9 214 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 211 8.5E-58 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PA257_4223 40f0e9b452475a81ced7f22398fbec4e 352 SUPERFAMILY SSF53335 181 274 2.61E-13 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_4223 40f0e9b452475a81ced7f22398fbec4e 352 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 350 75.524 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 PA257_4223 40f0e9b452475a81ced7f22398fbec4e 352 PIRSF PIRSF028774 1 352 3.4E-169 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 PA257_4223 40f0e9b452475a81ced7f22398fbec4e 352 Gene3D G3DSA:3.30.2300.20 79 171 5.4E-26 T 12-10-2018 PA257_4223 40f0e9b452475a81ced7f22398fbec4e 352 Gene3D G3DSA:3.30.70.2810 1 74 1.2E-24 T 12-10-2018 PA257_4223 40f0e9b452475a81ced7f22398fbec4e 352 Pfam PF01728 FtsJ-like methyltransferase 182 275 2.0E-8 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PA257_4223 40f0e9b452475a81ced7f22398fbec4e 352 Gene3D G3DSA:3.40.50.150 172 351 1.0E-53 T 12-10-2018 PA257_5831 ee3ccff8782c86da046a3c187c08ebac 185 SUPERFAMILY SSF53271 15 183 2.49E-43 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like PA257_5831 ee3ccff8782c86da046a3c187c08ebac 185 Gene3D G3DSA:3.40.50.2020 3 184 2.3E-51 T 12-10-2018 PA257_5831 ee3ccff8782c86da046a3c187c08ebac 185 Pfam PF00156 Phosphoribosyl transferase domain 18 145 2.2E-24 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 Gene3D G3DSA:1.10.240.10 218 326 3.2E-32 T 12-10-2018 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 315 8.9E-81 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 Gene3D G3DSA:3.40.50.620 4 217 5.5E-78 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_0803 9f5777366d839fc0d87c559621a32a93 399 SUPERFAMILY SSF52374 4 310 2.43E-99 T 12-10-2018 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 396 48.202 T 12-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 Gene3D G3DSA:3.10.290.10 327 396 1.6E-9 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 396 1.5E-119 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 SUPERFAMILY SSF55174 320 396 9.68E-14 T 12-10-2018 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 2.2E-26 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 2.2E-26 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.2E-26 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PA257_0803 9f5777366d839fc0d87c559621a32a93 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.2E-26 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PA257_6557 9c2d8f305407947c39d4cb85d861d947 233 Pfam PF01914 MarC family integral membrane protein 6 214 1.8E-49 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PA257_6557 9c2d8f305407947c39d4cb85d861d947 233 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 214 3.8E-33 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PA257_4921 8d384f49abca083e9c84bf29874907ae 881 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 566 853 2.9E-92 T 12-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal PA257_4921 8d384f49abca083e9c84bf29874907ae 881 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 42 329 1.5E-16 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PA257_4921 8d384f49abca083e9c84bf29874907ae 881 SUPERFAMILY SSF55729 676 851 9.75E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_0812 4a7d0064975acf859e14a7e4dcbac952 234 Gene3D G3DSA:3.30.70.1070 117 185 3.9E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_0812 4a7d0064975acf859e14a7e4dcbac952 234 Pfam PF05036 Sporulation related domain 78 148 2.4E-7 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 PA257_0812 4a7d0064975acf859e14a7e4dcbac952 234 SUPERFAMILY SSF110997 157 223 6.02E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_0812 4a7d0064975acf859e14a7e4dcbac952 234 SUPERFAMILY SSF110997 80 148 1.31E-8 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_4634 eb0ae3290d912ca15029afd4910ffcef 163 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 40 146 3.4E-46 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PA257_4634 eb0ae3290d912ca15029afd4910ffcef 163 PIRSF PIRSF006105 3 162 3.3E-54 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PA257_4634 eb0ae3290d912ca15029afd4910ffcef 163 SUPERFAMILY SSF48695 44 153 6.55E-43 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily PA257_4634 eb0ae3290d912ca15029afd4910ffcef 163 Gene3D G3DSA:1.10.1130.10 66 133 6.1E-28 T 12-10-2018 PA257_5791 207c1a26e5b54482d55d72cea50d0404 144 Pfam PF05425 Copper resistance protein D 44 134 5.4E-11 T 12-10-2018 IPR008457 Copper resistance protein D GO:0016021 PA257_5777 97823ba3e7313d5c4944019a4227b1fd 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 467 2.6E-117 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 PA257_5777 97823ba3e7313d5c4944019a4227b1fd 482 Gene3D G3DSA:2.20.200.10 103 356 4.6E-158 T 12-10-2018 PA257_5777 97823ba3e7313d5c4944019a4227b1fd 482 SUPERFAMILY SSF56954 5 469 8.76E-105 T 12-10-2018 PA257_5777 97823ba3e7313d5c4944019a4227b1fd 482 Gene3D G3DSA:1.20.1600.10 57 465 4.6E-158 T 12-10-2018 PA257_5777 97823ba3e7313d5c4944019a4227b1fd 482 Pfam PF02321 Outer membrane efflux protein 67 256 1.7E-20 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_5777 97823ba3e7313d5c4944019a4227b1fd 482 Pfam PF02321 Outer membrane efflux protein 285 465 2.5E-32 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PA257_4161 6379d59b23983a664ec681375c7b0693 270 Pfam PF12697 Alpha/beta hydrolase family 5 252 1.4E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_4161 6379d59b23983a664ec681375c7b0693 270 SUPERFAMILY SSF53474 5 258 4.32E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4161 6379d59b23983a664ec681375c7b0693 270 Gene3D G3DSA:3.40.50.1820 2 263 2.7E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1957 f2c8ded1488f2db5e3a0ab42f3893a0d 692 Pfam PF04185 Phosphoesterase family 48 422 2.5E-133 T 12-10-2018 IPR007312 Phosphoesterase GO:0016788 PA257_1957 f2c8ded1488f2db5e3a0ab42f3893a0d 692 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 5 686 1.1E-300 T 12-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 PA257_1957 f2c8ded1488f2db5e3a0ab42f3893a0d 692 Pfam PF05506 Domain of unknown function (DUF756) 590 672 7.1E-19 T 12-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 PA257_1957 f2c8ded1488f2db5e3a0ab42f3893a0d 692 Pfam PF05506 Domain of unknown function (DUF756) 490 577 4.7E-20 T 12-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 PA257_1957 f2c8ded1488f2db5e3a0ab42f3893a0d 692 Gene3D G3DSA:3.40.720.10 265 469 2.6E-53 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_1957 f2c8ded1488f2db5e3a0ab42f3893a0d 692 Gene3D G3DSA:3.40.720.10 38 203 3.5E-28 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_0687 1a42b573d9ffc82401a73244f79fd9db 247 SUPERFAMILY SSF56300 1 231 2.13E-24 T 12-10-2018 PA257_0687 1a42b573d9ffc82401a73244f79fd9db 247 Gene3D G3DSA:3.60.21.10 1 232 1.1E-15 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like PA257_0687 1a42b573d9ffc82401a73244f79fd9db 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 214 1.2E-9 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 SUPERFAMILY SSF54980 390 465 5.76E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 Gene3D G3DSA:3.40.50.300 12 375 1.5E-110 T 12-10-2018 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 Pfam PF03144 Elongation factor Tu domain 2 311 376 3.1E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.9E-16 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 135 144 7.6E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 13 26 7.6E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 83 93 7.6E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 99 110 7.6E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 63 71 7.6E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 Gene3D G3DSA:3.40.50.300 19 272 1.5E-110 T 12-10-2018 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 SUPERFAMILY SSF52540 8 274 3.83E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 Pfam PF00009 Elongation factor Tu GTP binding domain 11 274 2.2E-46 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 526 8.5E-262 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 524 51.441 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 Gene3D G3DSA:3.30.70.3280 387 526 7.4E-52 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 SUPERFAMILY SSF50447 259 390 5.08E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_1260 8b12186d5ac1500a2fdb3a153e39ab87 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 511 2.6E-45 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal PA257_5264 f34d2dfbf16b96f2133018b12116af89 1001 Pfam PF04851 Type III restriction enzyme, res subunit 10 251 4.8E-12 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PA257_5264 f34d2dfbf16b96f2133018b12116af89 1001 Gene3D G3DSA:3.40.50.300 73 271 4.7E-10 T 12-10-2018 PA257_5264 f34d2dfbf16b96f2133018b12116af89 1001 Gene3D G3DSA:3.40.50.300 458 600 5.1E-9 T 12-10-2018 PA257_5264 f34d2dfbf16b96f2133018b12116af89 1001 SUPERFAMILY SSF52540 89 566 1.3E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5264 f34d2dfbf16b96f2133018b12116af89 1001 SUPERFAMILY SSF52540 10 257 1.92E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0584 126a713ac3b595ffa8245a0643b2c659 407 Pfam PF02515 CoA-transferase family III 5 383 4.2E-133 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 PA257_0584 126a713ac3b595ffa8245a0643b2c659 407 Gene3D G3DSA:3.30.1540.10 243 334 9.4E-145 T 12-10-2018 PA257_0584 126a713ac3b595ffa8245a0643b2c659 407 Gene3D G3DSA:3.40.50.10540 5 401 9.4E-145 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily PA257_0584 126a713ac3b595ffa8245a0643b2c659 407 SUPERFAMILY SSF89796 3 407 8.63E-147 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily PA257_5544 3c2006ab6f7fffc29a5338317937a89f 1276 Pfam PF13502 AsmA-like C-terminal region 1020 1265 1.4E-50 T 12-10-2018 IPR032712 AsmA-like, C-terminal PA257_5544 3c2006ab6f7fffc29a5338317937a89f 1276 Pfam PF13116 Protein of unknown function 513 799 1.6E-49 T 12-10-2018 IPR025263 Domain of unknown function DUF3971 PA257_5544 3c2006ab6f7fffc29a5338317937a89f 1276 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 10 1275 5.5E-292 T 12-10-2018 IPR011836 Conserved hypothetical protein CHP02099 PA257_0963 2c54ecfd0cd8260a5d79acda80ea9c5f 140 Gene3D G3DSA:1.10.10.10 1 140 7.2E-41 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0963 2c54ecfd0cd8260a5d79acda80ea9c5f 140 SMART SM00347 25 125 7.7E-24 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_0963 2c54ecfd0cd8260a5d79acda80ea9c5f 140 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 7 136 1.5E-61 T 12-10-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 PA257_0963 2c54ecfd0cd8260a5d79acda80ea9c5f 140 Pfam PF01047 MarR family 32 90 1.5E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_0963 2c54ecfd0cd8260a5d79acda80ea9c5f 140 SUPERFAMILY SSF46785 7 137 8.85E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0963 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 5.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_0963 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 5.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_0963 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 5.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PA257_2291 33a0dc92cc54cefdac279e15357ed172 124 Gene3D G3DSA:2.30.30.320 34 116 2.1E-31 T 12-10-2018 IPR037135 DUF1653-like domain superfamily PA257_2291 33a0dc92cc54cefdac279e15357ed172 124 Pfam PF07866 Protein of unknown function (DUF1653) 44 103 4.6E-30 T 12-10-2018 IPR023387 DUF1653-like domain PA257_0938 711ebe81ee8be326130a8da4dba15bb5 694 SUPERFAMILY SSF56935 33 694 4.88E-107 T 12-10-2018 PA257_0938 711ebe81ee8be326130a8da4dba15bb5 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 171 1.3E-11 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_0938 711ebe81ee8be326130a8da4dba15bb5 694 Gene3D G3DSA:2.40.170.20 48 694 2.7E-115 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_0938 711ebe81ee8be326130a8da4dba15bb5 694 Pfam PF00593 TonB dependent receptor 263 690 9.4E-44 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_4110 023fd4d4f56174e05502bb6754d9d4c8 397 SUPERFAMILY SSF49879 19 104 2.9E-16 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 PA257_4110 023fd4d4f56174e05502bb6754d9d4c8 397 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 386 7.0E-127 T 12-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein PA257_4110 023fd4d4f56174e05502bb6754d9d4c8 397 Pfam PF00498 FHA domain 30 96 7.9E-13 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PA257_4110 023fd4d4f56174e05502bb6754d9d4c8 397 Gene3D G3DSA:2.60.200.20 4 107 1.3E-14 T 12-10-2018 PA257_4448 835eaea7051bfa2080ad057524e407d4 515 Gene3D G3DSA:3.30.1490.20 310 385 8.1E-7 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PA257_4448 835eaea7051bfa2080ad057524e407d4 515 Pfam PF08443 RimK-like ATP-grasp domain 302 478 2.5E-5 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 PA257_4448 835eaea7051bfa2080ad057524e407d4 515 SUPERFAMILY SSF56059 292 500 1.57E-34 T 12-10-2018 PA257_4448 835eaea7051bfa2080ad057524e407d4 515 Gene3D G3DSA:3.30.470.20 386 502 1.3E-18 T 12-10-2018 PA257_4448 835eaea7051bfa2080ad057524e407d4 515 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 42 192 2.2E-44 T 12-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain PA257_4005 021baa9421d6f31dbb048a4d89abeab7 508 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 184 8.2E-47 T 12-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices PA257_4005 021baa9421d6f31dbb048a4d89abeab7 508 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 260 505 1.2E-94 T 12-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase PA257_2667 0588e65543f65484ffade6dc8670a940 178 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 45 177 9.9E-11 T 12-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 PA257_2667 0588e65543f65484ffade6dc8670a940 178 Gene3D G3DSA:2.60.40.420 28 178 2.4E-37 T 12-10-2018 IPR008972 Cupredoxin PA257_2667 0588e65543f65484ffade6dc8670a940 178 SUPERFAMILY SSF49503 42 177 3.75E-31 T 12-10-2018 IPR008972 Cupredoxin PA257_4999 8e0dceccd66c24c04e436402d4de1b47 139 SUPERFAMILY SSF161084 11 136 1.27E-16 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily PA257_4999 8e0dceccd66c24c04e436402d4de1b47 139 Gene3D G3DSA:1.20.120.550 6 136 3.7E-11 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily PA257_4999 8e0dceccd66c24c04e436402d4de1b47 139 Pfam PF01124 MAPEG family 6 136 2.3E-21 T 12-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PA257_1160 ace02d04aa5629497ad86907221a2645 448 SUPERFAMILY SSF47090 377 446 3.4E-17 T 12-10-2018 IPR036365 PGBD-like superfamily PA257_1160 ace02d04aa5629497ad86907221a2645 448 Pfam PF13406 Transglycosylase SLT domain 75 369 2.0E-111 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 PA257_1160 ace02d04aa5629497ad86907221a2645 448 Gene3D G3DSA:1.10.530.10 118 368 1.1E-84 T 12-10-2018 PA257_1160 ace02d04aa5629497ad86907221a2645 448 Gene3D G3DSA:1.10.8.350 90 251 1.1E-84 T 12-10-2018 PA257_1160 ace02d04aa5629497ad86907221a2645 448 Gene3D G3DSA:1.10.101.10 389 447 3.5E-10 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PA257_1160 ace02d04aa5629497ad86907221a2645 448 Pfam PF01471 Putative peptidoglycan binding domain 391 445 3.1E-12 T 12-10-2018 IPR002477 Peptidoglycan binding-like PA257_1160 ace02d04aa5629497ad86907221a2645 448 SUPERFAMILY SSF53955 65 375 4.69E-105 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_1160 ace02d04aa5629497ad86907221a2645 448 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 75 373 7.0E-119 T 12-10-2018 IPR011970 Lytic murein transglycosylase PA257_2153 72c9a8013f32f29d92346a1747a20d18 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 7.1E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PA257_2153 72c9a8013f32f29d92346a1747a20d18 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 7.1E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PA257_2153 72c9a8013f32f29d92346a1747a20d18 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 7.1E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PA257_2153 72c9a8013f32f29d92346a1747a20d18 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 7.1E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PA257_2153 72c9a8013f32f29d92346a1747a20d18 398 SUPERFAMILY SSF53383 1 398 2.61E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_2153 72c9a8013f32f29d92346a1747a20d18 398 Gene3D G3DSA:3.40.640.10 62 302 1.7E-161 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_2153 72c9a8013f32f29d92346a1747a20d18 398 Gene3D G3DSA:3.90.1150.10 7 394 1.7E-161 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_2153 72c9a8013f32f29d92346a1747a20d18 398 Pfam PF00155 Aminotransferase class I and II 30 394 8.0E-77 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_2153 72c9a8013f32f29d92346a1747a20d18 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PA257_4145 bf78a08495a4a9fab75dca3671893ef2 230 Gene3D G3DSA:3.40.50.2300 2 127 5.3E-32 T 12-10-2018 PA257_4145 bf78a08495a4a9fab75dca3671893ef2 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 4.4E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_4145 bf78a08495a4a9fab75dca3671893ef2 230 SUPERFAMILY SSF52172 7 185 3.7E-37 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4145 bf78a08495a4a9fab75dca3671893ef2 230 Gene3D G3DSA:1.10.10.10 128 228 6.7E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4145 bf78a08495a4a9fab75dca3671893ef2 230 Pfam PF00072 Response regulator receiver domain 8 116 1.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4145 bf78a08495a4a9fab75dca3671893ef2 230 SMART SM00448 6 116 7.6E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_4145 bf78a08495a4a9fab75dca3671893ef2 230 SMART SM00862 151 227 2.8E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_4819 e0e937e41e14aec901568ae53f88a943 357 Pfam PF01594 AI-2E family transporter 20 345 3.2E-72 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like PA257_4079 ff453a550d93acdb44d7b774d8635708 137 Pfam PF02120 Flagellar hook-length control protein FliK 40 122 3.1E-10 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal PA257_4079 ff453a550d93acdb44d7b774d8635708 137 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 8 137 8.1E-48 T 12-10-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 PA257_3024 8c4d6f97232bf0386bc98681ccd93952 270 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 269 2.7E-94 T 12-10-2018 PA257_3024 8c4d6f97232bf0386bc98681ccd93952 270 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PA257_3024 8c4d6f97232bf0386bc98681ccd93952 270 Gene3D G3DSA:3.60.10.10 1 269 7.4E-77 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_3024 8c4d6f97232bf0386bc98681ccd93952 270 SUPERFAMILY SSF56219 1 269 5.1E-83 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_3024 8c4d6f97232bf0386bc98681ccd93952 270 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 269 2.6E-82 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PA257_3024 8c4d6f97232bf0386bc98681ccd93952 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 262 4.9E-17 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PA257_6357 386f1f27f4bd269042c429831d349026 533 Pfam PF03109 ABC1 family 114 233 1.7E-36 T 12-10-2018 IPR004147 UbiB domain PA257_6357 386f1f27f4bd269042c429831d349026 533 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 447 1.2E-177 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 PA257_6357 386f1f27f4bd269042c429831d349026 533 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 533 54.182 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 PA257_6357 386f1f27f4bd269042c429831d349026 533 SUPERFAMILY SSF56112 97 438 1.8E-47 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_2769 846dcd3739097b2d4502865b03cfc617 190 Pfam PF12697 Alpha/beta hydrolase family 5 179 9.3E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2769 846dcd3739097b2d4502865b03cfc617 190 Gene3D G3DSA:3.40.50.1820 1 187 2.2E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2769 846dcd3739097b2d4502865b03cfc617 190 SUPERFAMILY SSF53474 3 183 9.09E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6370 59fbcbd2d6de54fec17b3db6ae0d9d10 525 Gene3D G3DSA:2.60.40.10 411 525 9.2E-47 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_6370 59fbcbd2d6de54fec17b3db6ae0d9d10 525 Gene3D G3DSA:2.70.98.10 35 410 2.2E-171 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 PA257_6370 59fbcbd2d6de54fec17b3db6ae0d9d10 525 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 36 521 9.6E-200 T 12-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 PA257_6370 59fbcbd2d6de54fec17b3db6ae0d9d10 525 PIRSF PIRSF006281 2 525 1.7E-243 T 12-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD PA257_6370 59fbcbd2d6de54fec17b3db6ae0d9d10 525 SUPERFAMILY SSF74650 36 407 6.28E-167 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PA257_6370 59fbcbd2d6de54fec17b3db6ae0d9d10 525 SUPERFAMILY SSF81296 411 524 1.68E-30 T 12-10-2018 IPR014756 Immunoglobulin E-set PA257_6370 59fbcbd2d6de54fec17b3db6ae0d9d10 525 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 18 523 61.988 T 12-10-2018 IPR023704 Glucan biosynthesis protein G PA257_0444 ba10126147c184f74c48b1c15af73615 332 PIRSF PIRSF005211 1 332 3.0E-113 T 12-10-2018 IPR012020 AB hydrolase 4 family PA257_0444 ba10126147c184f74c48b1c15af73615 332 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 233 274 - T 12-10-2018 IPR000952 AB hydrolase 4, conserved site PA257_0444 ba10126147c184f74c48b1c15af73615 332 Pfam PF00561 alpha/beta hydrolase fold 60 308 2.2E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0444 ba10126147c184f74c48b1c15af73615 332 SUPERFAMILY SSF53474 24 310 1.67E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0444 ba10126147c184f74c48b1c15af73615 332 Gene3D G3DSA:3.40.50.1820 31 331 7.0E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_5167 d335f7287587dcb9a4c56f086c34bbe8 298 Gene3D G3DSA:3.40.50.720 1 163 1.4E-59 T 12-10-2018 PA257_5167 d335f7287587dcb9a4c56f086c34bbe8 298 SUPERFAMILY SSF51735 1 162 2.06E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5167 d335f7287587dcb9a4c56f086c34bbe8 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 3.1E-53 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PA257_5167 d335f7287587dcb9a4c56f086c34bbe8 298 PIRSF PIRSF000103 1 298 4.3E-83 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_5167 d335f7287587dcb9a4c56f086c34bbe8 298 SUPERFAMILY SSF48179 164 293 5.55E-41 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_5167 d335f7287587dcb9a4c56f086c34bbe8 298 Gene3D G3DSA:1.10.1040.10 164 298 7.1E-47 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_5167 d335f7287587dcb9a4c56f086c34bbe8 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_5167 d335f7287587dcb9a4c56f086c34bbe8 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 5.7E-33 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PA257_5167 d335f7287587dcb9a4c56f086c34bbe8 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 8.1E-125 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 PA257_1655 7abf20a080e7986101d8950ecee5174b 335 Gene3D G3DSA:2.120.10.30 41 172 3.7E-14 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PA257_1655 7abf20a080e7986101d8950ecee5174b 335 SUPERFAMILY SSF69304 45 313 1.31E-17 T 12-10-2018 PA257_1655 7abf20a080e7986101d8950ecee5174b 335 Pfam PF07676 WD40-like Beta Propeller Repeat 91 111 0.014 T 12-10-2018 IPR011659 WD40-like Beta Propeller PA257_0381 94398c5607dac139baba3951eb548f12 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 22 119 7.5E-31 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_0381 94398c5607dac139baba3951eb548f12 230 SUPERFAMILY SSF161098 22 213 3.4E-44 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0381 94398c5607dac139baba3951eb548f12 230 Gene3D G3DSA:1.10.3720.10 16 226 7.4E-52 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0381 94398c5607dac139baba3951eb548f12 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 225 1.9E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_6623 47173f8fbd970ce3508496d969e6035e 326 SUPERFAMILY SSF143865 1 265 2.35E-40 T 12-10-2018 PA257_6623 47173f8fbd970ce3508496d969e6035e 326 Gene3D G3DSA:3.30.460.20 1 130 2.7E-8 T 12-10-2018 PA257_6623 47173f8fbd970ce3508496d969e6035e 326 Gene3D G3DSA:1.20.58.340 250 326 3.1E-26 T 12-10-2018 PA257_6623 47173f8fbd970ce3508496d969e6035e 326 SUPERFAMILY SSF144083 261 323 8.5E-20 T 12-10-2018 PA257_6623 47173f8fbd970ce3508496d969e6035e 326 Pfam PF01544 CorA-like Mg2+ transporter protein 28 321 5.9E-54 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PA257_3888 07ea34bc6beeb7ee92d82a326d66cd3d 216 Pfam PF08362 YcdC-like protein, C-terminal region 59 199 2.5E-51 T 12-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PA257_3888 07ea34bc6beeb7ee92d82a326d66cd3d 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3888 07ea34bc6beeb7ee92d82a326d66cd3d 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3888 07ea34bc6beeb7ee92d82a326d66cd3d 216 SUPERFAMILY SSF46689 3 80 3.13E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3888 07ea34bc6beeb7ee92d82a326d66cd3d 216 Gene3D G3DSA:1.10.357.10 59 200 8.9E-42 T 12-10-2018 PA257_3888 07ea34bc6beeb7ee92d82a326d66cd3d 216 Gene3D G3DSA:1.10.10.60 2 58 7.1E-18 T 12-10-2018 PA257_3888 07ea34bc6beeb7ee92d82a326d66cd3d 216 SUPERFAMILY SSF48498 76 199 1.68E-33 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_3888 07ea34bc6beeb7ee92d82a326d66cd3d 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.0E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_5595 c8f89b49da6f77d66f12b17516b4e9a3 751 Pfam PF07793 Protein of unknown function (DUF1631) 24 745 8.5E-254 T 12-10-2018 IPR012434 Protein of unknown function DUF1631 PA257_2581 026ef91dccf84be2108b685dded8da41 405 Pfam PF06527 TniQ 8 165 3.5E-24 T 12-10-2018 IPR009492 TniQ PA257_5845 841b77f013646cdd757d1696a38fea67 299 SMART SM00422 11 80 1.8E-22 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5845 841b77f013646cdd757d1696a38fea67 299 Pfam PF13411 MerR HTH family regulatory protein 12 78 8.5E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_5845 841b77f013646cdd757d1696a38fea67 299 Gene3D G3DSA:1.10.1240.10 93 166 3.3E-7 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PA257_5845 841b77f013646cdd757d1696a38fea67 299 SUPERFAMILY SSF46955 12 109 8.24E-21 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_5845 841b77f013646cdd757d1696a38fea67 299 Gene3D G3DSA:1.10.1660.10 7 79 2.1E-24 T 12-10-2018 PA257_1766 438f6cf7ec6635a04e372355d124993d 330 Gene3D G3DSA:1.20.910.10 102 327 5.6E-47 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_1766 438f6cf7ec6635a04e372355d124993d 330 SUPERFAMILY SSF48613 105 319 6.82E-31 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_1766 438f6cf7ec6635a04e372355d124993d 330 Gene3D G3DSA:1.10.1240.20 8 91 3.1E-31 T 12-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 PA257_1766 438f6cf7ec6635a04e372355d124993d 330 SMART SM01236 172 274 2.7E-20 T 12-10-2018 PA257_1766 438f6cf7ec6635a04e372355d124993d 330 Pfam PF14518 Iron-containing redox enzyme 139 306 4.3E-14 T 12-10-2018 PA257_1766 438f6cf7ec6635a04e372355d124993d 330 Pfam PF14515 Haem-oxygenase-associated N-terminal helices 4 91 9.5E-44 T 12-10-2018 IPR029474 Haem-oxygenase-associated, N-terminal helices PA257_4507 35593789bf3b60ae0c4ebf85d57364ca 279 SUPERFAMILY SSF53474 5 275 7.03E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4507 35593789bf3b60ae0c4ebf85d57364ca 279 Gene3D G3DSA:3.40.50.1820 1 274 1.7E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4507 35593789bf3b60ae0c4ebf85d57364ca 279 PIRSF PIRSF037442 1 279 1.7E-76 T 12-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 PA257_4507 35593789bf3b60ae0c4ebf85d57364ca 279 Pfam PF12697 Alpha/beta hydrolase family 37 263 9.3E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_1461 ce70cf95c596ce5c328024196225289d 247 SMART SM00866 104 240 2.1E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_1461 ce70cf95c596ce5c328024196225289d 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 84 9.4E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_1461 ce70cf95c596ce5c328024196225289d 247 Pfam PF07702 UTRA domain 106 240 4.3E-34 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PA257_1461 ce70cf95c596ce5c328024196225289d 247 SUPERFAMILY SSF46785 16 87 1.13E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1461 ce70cf95c596ce5c328024196225289d 247 Gene3D G3DSA:3.40.1410.10 86 247 3.8E-40 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_1461 ce70cf95c596ce5c328024196225289d 247 SUPERFAMILY SSF64288 72 247 4.4E-44 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PA257_1461 ce70cf95c596ce5c328024196225289d 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.9E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_1461 ce70cf95c596ce5c328024196225289d 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.9E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_1461 ce70cf95c596ce5c328024196225289d 247 Gene3D G3DSA:1.10.10.10 12 85 1.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1461 ce70cf95c596ce5c328024196225289d 247 SMART SM00345 25 84 5.8E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_5010 fd6374e625fd5c2e62072eb35a2954bc 370 Gene3D G3DSA:3.20.20.70 5 360 1.8E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_5010 fd6374e625fd5c2e62072eb35a2954bc 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 354 8.4E-71 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PA257_5010 fd6374e625fd5c2e62072eb35a2954bc 370 SUPERFAMILY SSF51395 3 357 1.68E-100 T 12-10-2018 PA257_2552 1098c9abad4cc27772539306577876cf 67 Pfam PF01527 Transposase 2 50 7.0E-12 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_2552 1098c9abad4cc27772539306577876cf 67 SUPERFAMILY SSF46689 1 49 4.3E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3206 614e76c7b1393631f780016460fae7f5 254 SUPERFAMILY SSF53474 8 232 1.24E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3206 614e76c7b1393631f780016460fae7f5 254 Gene3D G3DSA:3.40.50.1820 6 233 8.2E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3206 614e76c7b1393631f780016460fae7f5 254 Pfam PF00975 Thioesterase domain 8 230 3.6E-52 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 PA257_5692 2205a58c848c5cd3d34be43b1899e32c 49 Pfam PF11660 Protein of unknown function (DUF3262) 2 48 2.9E-13 T 12-10-2018 IPR021676 Protein of unknown function DUF3262 PA257_5692 2205a58c848c5cd3d34be43b1899e32c 49 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 1 49 7.9E-15 T 12-10-2018 IPR021676 Protein of unknown function DUF3262 PA257_1331 d925f3efaeb61ecf72ce715d74d4962c 137 Pfam PF09413 Putative prokaryotic signal transducing protein 5 66 9.4E-9 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 PA257_1331 d925f3efaeb61ecf72ce715d74d4962c 137 SUPERFAMILY SSF54913 4 67 5.11E-6 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta PA257_3264 9b6bfaf069e3dceeb0b92994db732f36 401 Pfam PF13343 Bacterial extracellular solute-binding protein 131 313 3.1E-10 T 12-10-2018 PA257_3264 9b6bfaf069e3dceeb0b92994db732f36 401 Gene3D G3DSA:3.40.190.10 171 341 4.6E-21 T 12-10-2018 PA257_3264 9b6bfaf069e3dceeb0b92994db732f36 401 SUPERFAMILY SSF53850 63 352 8.69E-34 T 12-10-2018 PA257_3264 9b6bfaf069e3dceeb0b92994db732f36 401 Gene3D G3DSA:3.40.190.10 82 330 4.6E-21 T 12-10-2018 PA257_1410 e556d953d62fbb6c3af07f70c2db0acc 573 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 438 572 2.0E-37 T 12-10-2018 IPR018760 Protein of unknown function DUF2326 PA257_6206 c60db30084fe2d9622bbe1d37f594cf9 832 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 511 819 2.1E-72 T 12-10-2018 IPR007296 Domain of unknown function DUF403 PA257_6206 c60db30084fe2d9622bbe1d37f594cf9 832 Gene3D G3DSA:3.40.50.11290 218 316 2.1E-40 T 12-10-2018 PA257_6206 c60db30084fe2d9622bbe1d37f594cf9 832 Pfam PF14403 Circularly permuted ATP-grasp type 2 81 462 7.6E-156 T 12-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 PA257_6206 c60db30084fe2d9622bbe1d37f594cf9 832 SUPERFAMILY SSF56059 23 418 9.18E-24 T 12-10-2018 PA257_3622 6afc1ca582b7255f154d7ada77f8c85d 317 Pfam PF03466 LysR substrate binding domain 87 288 1.0E-35 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3622 6afc1ca582b7255f154d7ada77f8c85d 317 SUPERFAMILY SSF53850 85 275 7.71E-34 T 12-10-2018 PA257_3622 6afc1ca582b7255f154d7ada77f8c85d 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3622 6afc1ca582b7255f154d7ada77f8c85d 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3622 6afc1ca582b7255f154d7ada77f8c85d 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3622 6afc1ca582b7255f154d7ada77f8c85d 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.5E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3622 6afc1ca582b7255f154d7ada77f8c85d 317 Gene3D G3DSA:1.10.10.10 1 84 9.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3622 6afc1ca582b7255f154d7ada77f8c85d 317 Gene3D G3DSA:3.40.190.10 163 265 8.6E-29 T 12-10-2018 PA257_3622 6afc1ca582b7255f154d7ada77f8c85d 317 Gene3D G3DSA:3.40.190.10 90 274 8.6E-29 T 12-10-2018 PA257_3622 6afc1ca582b7255f154d7ada77f8c85d 317 SUPERFAMILY SSF46785 1 110 7.26E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2335 c4385b107294392e57d6b133159bf121 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.8E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2335 c4385b107294392e57d6b133159bf121 60 Pfam PF01783 Ribosomal L32p protein family 2 56 3.4E-20 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_2335 c4385b107294392e57d6b133159bf121 60 SUPERFAMILY SSF57829 2 55 9.16E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 PA257_2335 c4385b107294392e57d6b133159bf121 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.732 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_4257 8692b42ccb85a1eff9fc03b66a84bcfa 248 Gene3D G3DSA:3.40.190.10 48 247 4.3E-11 T 12-10-2018 PA257_4257 8692b42ccb85a1eff9fc03b66a84bcfa 248 Gene3D G3DSA:3.40.190.10 115 213 4.3E-11 T 12-10-2018 PA257_4257 8692b42ccb85a1eff9fc03b66a84bcfa 248 SUPERFAMILY SSF53850 28 247 1.74E-19 T 12-10-2018 PA257_4257 8692b42ccb85a1eff9fc03b66a84bcfa 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 247 2.6E-9 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_3603 42ae743d82fd5d7a119ca37e31a36521 160 Gene3D G3DSA:2.60.40.1090 2 160 3.6E-27 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 PA257_3603 42ae743d82fd5d7a119ca37e31a36521 160 SUPERFAMILY SSF49401 5 160 1.14E-24 T 12-10-2018 IPR008966 Adhesion domain superfamily PA257_3603 42ae743d82fd5d7a119ca37e31a36521 160 Pfam PF00419 Fimbrial protein 6 159 2.2E-10 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PA257_6003 3a17e2459deb16544453702d24001d99 309 SUPERFAMILY SSF103481 57 158 1.83E-11 T 12-10-2018 PA257_6003 3a17e2459deb16544453702d24001d99 309 SUPERFAMILY SSF103481 200 303 1.2E-13 T 12-10-2018 PA257_6003 3a17e2459deb16544453702d24001d99 309 Pfam PF00892 EamA-like transporter family 165 297 3.0E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_6003 3a17e2459deb16544453702d24001d99 309 Pfam PF00892 EamA-like transporter family 28 154 2.5E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_1222 b3d698228532648550b5cb209048e3f7 678 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 7 632 9.8E-113 T 12-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 PA257_1222 b3d698228532648550b5cb209048e3f7 678 Pfam PF03169 OPT oligopeptide transporter protein 13 634 4.9E-110 T 12-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 PA257_1222 b3d698228532648550b5cb209048e3f7 678 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 13 636 2.1E-214 T 12-10-2018 IPR004814 Oligopeptide transporter OPT PA257_2031 058b69be9d4c67008f191935065a2460 582 Pfam PF00990 Diguanylate cyclase, GGDEF domain 406 505 3.0E-14 T 12-10-2018 IPR000160 GGDEF domain PA257_2031 058b69be9d4c67008f191935065a2460 582 SUPERFAMILY SSF141868 8 241 3.01E-67 T 12-10-2018 IPR035919 EAL domain superfamily PA257_2031 058b69be9d4c67008f191935065a2460 582 Gene3D G3DSA:3.20.20.450 4 248 5.2E-69 T 12-10-2018 IPR035919 EAL domain superfamily PA257_2031 058b69be9d4c67008f191935065a2460 582 SUPERFAMILY SSF54631 277 406 4.43E-11 T 12-10-2018 PA257_2031 058b69be9d4c67008f191935065a2460 582 SMART SM00052 2 244 1.4E-48 T 12-10-2018 IPR001633 EAL domain PA257_2031 058b69be9d4c67008f191935065a2460 582 Gene3D G3DSA:3.30.70.270 395 573 9.6E-26 T 12-10-2018 PA257_2031 058b69be9d4c67008f191935065a2460 582 SMART SM00267 390 577 4.4E-7 T 12-10-2018 IPR000160 GGDEF domain PA257_2031 058b69be9d4c67008f191935065a2460 582 Gene3D G3DSA:3.10.580.10 275 394 9.7E-12 T 12-10-2018 PA257_2031 058b69be9d4c67008f191935065a2460 582 Pfam PF00563 EAL domain 9 239 5.1E-56 T 12-10-2018 IPR001633 EAL domain PA257_2031 058b69be9d4c67008f191935065a2460 582 Pfam PF00571 CBS domain 278 323 2.6E-5 T 12-10-2018 IPR000644 CBS domain PA257_2031 058b69be9d4c67008f191935065a2460 582 SUPERFAMILY SSF55073 407 572 1.18E-23 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_2031 058b69be9d4c67008f191935065a2460 582 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 417 492 2.1E-14 T 12-10-2018 IPR000160 GGDEF domain PA257_0072 ac88d47a37b79db70646384c0b112013 142 SUPERFAMILY SSF51182 42 132 1.67E-11 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_0072 ac88d47a37b79db70646384c0b112013 142 Gene3D G3DSA:2.60.120.10 36 127 1.1E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1042 8fda96de6806b9dfbf4421f9636f14be 397 ProSitePatterns PS00336 Beta-lactamase class-C active site. 86 93 - T 12-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 PA257_1042 8fda96de6806b9dfbf4421f9636f14be 397 Pfam PF00144 Beta-lactamase 38 385 1.2E-79 T 12-10-2018 IPR001466 Beta-lactamase-related PA257_1042 8fda96de6806b9dfbf4421f9636f14be 397 SUPERFAMILY SSF56601 32 387 1.98E-95 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_1042 8fda96de6806b9dfbf4421f9636f14be 397 Gene3D G3DSA:3.40.710.10 32 389 5.7E-121 T 12-10-2018 PA257_6843 d7827f72ac225aac24ae7b78080ca815 142 SUPERFAMILY SSF103481 46 141 5.1E-20 T 12-10-2018 PA257_6843 d7827f72ac225aac24ae7b78080ca815 142 Pfam PF00892 EamA-like transporter family 4 139 4.8E-25 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_3020 fdb6f83beaf7c4825affc16826327d60 347 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 16 321 6.4E-125 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 PA257_3020 fdb6f83beaf7c4825affc16826327d60 347 Pfam PF03741 Integral membrane protein TerC family 82 290 2.2E-60 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 PA257_3492 42a450994dd9a0d417f9f6161d8763da 193 SUPERFAMILY SSF46689 5 77 2.0E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3492 42a450994dd9a0d417f9f6161d8763da 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 5.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_3492 42a450994dd9a0d417f9f6161d8763da 193 Gene3D G3DSA:1.10.357.10 1 190 1.0E-28 T 12-10-2018 PA257_3673 63ba3b8c861f8b0306b182417516fb9c 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 337 1.4E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3673 63ba3b8c861f8b0306b182417516fb9c 338 SUPERFAMILY SSF161098 136 321 8.24E-18 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3673 63ba3b8c861f8b0306b182417516fb9c 338 Gene3D G3DSA:1.10.3720.10 130 334 1.0E-16 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1884 4347c33b83692a653ee8d844fc9c89fc 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 74 6.9E-18 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PA257_1884 4347c33b83692a653ee8d844fc9c89fc 100 Gene3D G3DSA:3.30.70.100 1 97 4.4E-24 T 12-10-2018 PA257_1884 4347c33b83692a653ee8d844fc9c89fc 100 SUPERFAMILY SSF54909 3 89 3.22E-22 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_5086 240dd1d4deb6f85346ca081201ae496a 275 Pfam PF13276 HTH-like domain 32 83 5.3E-13 T 12-10-2018 IPR025948 HTH-like domain PA257_5086 240dd1d4deb6f85346ca081201ae496a 275 Gene3D G3DSA:3.30.420.10 106 253 1.4E-15 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_5086 240dd1d4deb6f85346ca081201ae496a 275 SUPERFAMILY SSF53098 101 263 7.44E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_5086 240dd1d4deb6f85346ca081201ae496a 275 Pfam PF00665 Integrase core domain 108 223 2.2E-31 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_1611 be7dccb067702c84a455b9e18f964cbb 84 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 1 79 1.0E-23 T 12-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 PA257_1611 be7dccb067702c84a455b9e18f964cbb 84 Pfam PF11112 Pyocin activator protein PrtN 1 73 4.0E-26 T 12-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 PA257_0539 a82536b134f190752217618ec5c8626b 144 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 8 143 24.793 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PA257_0539 a82536b134f190752217618ec5c8626b 144 SMART SM00732 8 108 8.0E-40 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 PA257_0539 a82536b134f190752217618ec5c8626b 144 Gene3D G3DSA:3.30.420.140 8 142 4.9E-41 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 PA257_0539 a82536b134f190752217618ec5c8626b 144 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 11 139 2.6E-40 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PA257_0539 a82536b134f190752217618ec5c8626b 144 Pfam PF03652 Holliday junction resolvase 10 140 1.4E-39 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PA257_0539 a82536b134f190752217618ec5c8626b 144 SUPERFAMILY SSF53098 9 141 1.82E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_5363 508b69262acba7358ea2f6ddb837381b 421 Pfam PF00437 Type II/IV secretion system protein 92 368 4.2E-91 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_5363 508b69262acba7358ea2f6ddb837381b 421 Gene3D G3DSA:3.30.450.380 14 186 3.3E-40 T 12-10-2018 PA257_5363 508b69262acba7358ea2f6ddb837381b 421 Gene3D G3DSA:3.40.50.300 189 418 7.3E-66 T 12-10-2018 PA257_5363 508b69262acba7358ea2f6ddb837381b 421 SUPERFAMILY SSF52540 68 373 4.95E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5039 09548aec5fed513cb029329d7b77bf41 404 Gene3D G3DSA:3.30.2320.10 249 397 1.9E-74 T 12-10-2018 PA257_5039 09548aec5fed513cb029329d7b77bf41 404 Gene3D G3DSA:3.30.2400.10 149 392 1.9E-74 T 12-10-2018 PA257_5039 09548aec5fed513cb029329d7b77bf41 404 SUPERFAMILY SSF56563 115 404 3.4E-66 T 12-10-2018 PA257_5039 09548aec5fed513cb029329d7b77bf41 404 Pfam PF05065 Phage capsid family 123 401 3.1E-47 T 12-10-2018 IPR024455 Phage capsid PA257_5039 09548aec5fed513cb029329d7b77bf41 404 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 15 401 7.8E-48 T 12-10-2018 IPR024455 Phage capsid PA257_3667 31b674f249422f884120a332f6588794 212 Pfam PF02698 DUF218 domain 27 131 1.7E-14 T 12-10-2018 IPR003848 Domain of unknown function DUF218 PA257_3667 31b674f249422f884120a332f6588794 212 Gene3D G3DSA:3.40.50.620 16 137 7.0E-11 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_2842 f8017326a27ba6914aa470701d2d7517 131 SUPERFAMILY SSF51316 1 130 4.6E-48 T 12-10-2018 IPR011057 Mss4-like superfamily PA257_2842 f8017326a27ba6914aa470701d2d7517 131 Gene3D G3DSA:2.170.150.70 2 116 8.3E-20 T 12-10-2018 PA257_2842 f8017326a27ba6914aa470701d2d7517 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 113 2.8E-21 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PA257_5602 2e61a131381258f9a2636caad9665ed5 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 225 240 1.5E-26 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial PA257_5602 2e61a131381258f9a2636caad9665ed5 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 202 212 1.5E-26 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial PA257_5602 2e61a131381258f9a2636caad9665ed5 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 145 162 1.5E-26 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial PA257_5602 2e61a131381258f9a2636caad9665ed5 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 213 224 1.5E-26 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial PA257_5602 2e61a131381258f9a2636caad9665ed5 290 Pfam PF01478 Type IV leader peptidase family 137 245 1.8E-24 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PA257_5602 2e61a131381258f9a2636caad9665ed5 290 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 126 1.9E-33 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal PA257_2505 09da973280f687280969c9751a81bed9 105 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 8 100 1.2E-15 T 12-10-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 PA257_2505 09da973280f687280969c9751a81bed9 105 Gene3D G3DSA:2.10.260.10 2 46 1.3E-11 T 12-10-2018 PA257_2505 09da973280f687280969c9751a81bed9 105 SUPERFAMILY SSF89447 3 49 3.84E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily PA257_2505 09da973280f687280969c9751a81bed9 105 SMART SM00966 8 53 1.7E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 PA257_2505 09da973280f687280969c9751a81bed9 105 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 8 81 3.0E-7 T 12-10-2018 PA257_2505 09da973280f687280969c9751a81bed9 105 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 4.3E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 PA257_0669 5666a5a2055b728413c74514b47d1296 292 Gene3D G3DSA:3.40.190.290 92 290 1.4E-38 T 12-10-2018 PA257_0669 5666a5a2055b728413c74514b47d1296 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0669 5666a5a2055b728413c74514b47d1296 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0669 5666a5a2055b728413c74514b47d1296 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0669 5666a5a2055b728413c74514b47d1296 292 SUPERFAMILY SSF53850 91 291 9.93E-34 T 12-10-2018 PA257_0669 5666a5a2055b728413c74514b47d1296 292 Gene3D G3DSA:1.10.10.10 1 84 1.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0669 5666a5a2055b728413c74514b47d1296 292 Pfam PF03466 LysR substrate binding domain 88 288 2.1E-38 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0669 5666a5a2055b728413c74514b47d1296 292 SUPERFAMILY SSF46785 1 82 9.62E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0669 5666a5a2055b728413c74514b47d1296 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.2E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5540 e21e40ab0a14b6908f92076920fb4d75 449 SUPERFAMILY SSF111283 15 449 6.15E-128 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 PA257_5540 e21e40ab0a14b6908f92076920fb4d75 449 Gene3D G3DSA:3.30.2290.10 1 235 2.5E-105 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal PA257_5540 e21e40ab0a14b6908f92076920fb4d75 449 Pfam PF01523 Putative modulator of DNA gyrase 35 326 6.4E-62 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PA257_0650 1f34e4524d92f3129f7129d69129b07d 493 Gene3D G3DSA:2.140.10.20 100 487 1.3E-119 T 12-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily PA257_0650 1f34e4524d92f3129f7129d69129b07d 493 SUPERFAMILY SSF51004 102 485 5.62E-90 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily PA257_0650 1f34e4524d92f3129f7129d69129b07d 493 Pfam PF02239 Cytochrome D1 heme domain 129 484 2.9E-149 T 12-10-2018 PA257_0650 1f34e4524d92f3129f7129d69129b07d 493 SUPERFAMILY SSF46626 7 111 2.72E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0650 1f34e4524d92f3129f7129d69129b07d 493 Gene3D G3DSA:1.10.760.10 13 99 7.4E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0650 1f34e4524d92f3129f7129d69129b07d 493 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 21 92 1.2E-12 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_1213 9c99b8c07a6b95b18511818d4d263821 531 Gene3D G3DSA:3.40.109.10 28 254 3.4E-51 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_1213 9c99b8c07a6b95b18511818d4d263821 531 SUPERFAMILY SSF55469 100 229 2.28E-7 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_1213 9c99b8c07a6b95b18511818d4d263821 531 Gene3D G3DSA:3.40.109.10 292 512 3.8E-34 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_1213 9c99b8c07a6b95b18511818d4d263821 531 SUPERFAMILY SSF55469 416 515 1.26E-7 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_1213 9c99b8c07a6b95b18511818d4d263821 531 Pfam PF00881 Nitroreductase family 100 229 1.8E-5 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 PA257_2178 d405ba3087c78f64e14ea213f120c3da 360 Gene3D G3DSA:3.40.718.10 1 357 9.1E-152 T 12-10-2018 PA257_2178 d405ba3087c78f64e14ea213f120c3da 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 9.8E-140 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PA257_2178 d405ba3087c78f64e14ea213f120c3da 360 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 53.49 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 PA257_2178 d405ba3087c78f64e14ea213f120c3da 360 SMART SM01329 4 353 1.8E-212 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PA257_2178 d405ba3087c78f64e14ea213f120c3da 360 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 1.3E-163 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 PA257_2178 d405ba3087c78f64e14ea213f120c3da 360 SUPERFAMILY SSF53659 2 359 2.88E-126 T 12-10-2018 PA257_2178 d405ba3087c78f64e14ea213f120c3da 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 PA257_2004 f2155a42efe28ba921b6de03b95d6fe2 438 SUPERFAMILY SSF56935 49 438 1.28E-27 T 12-10-2018 PA257_2004 f2155a42efe28ba921b6de03b95d6fe2 438 Gene3D G3DSA:2.40.160.10 13 438 6.0E-175 T 12-10-2018 IPR023614 Porin domain superfamily PA257_2004 f2155a42efe28ba921b6de03b95d6fe2 438 Pfam PF07396 Phosphate-selective porin O and P 53 438 7.5E-108 T 12-10-2018 IPR010870 Phosphate-selective porin O/P PA257_3936 048904518e07d6f9e323b381cf4b4eb2 552 SUPERFAMILY SSF47226 2 115 4.83E-6 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_4032 36d30b03a2fa9489ebc15fee6915c34a 240 Pfam PF00117 Glutamine amidotransferase class-I 92 191 3.5E-10 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_4032 36d30b03a2fa9489ebc15fee6915c34a 240 Gene3D G3DSA:3.40.50.880 18 234 2.5E-39 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4032 36d30b03a2fa9489ebc15fee6915c34a 240 SUPERFAMILY SSF52317 3 229 4.43E-40 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4035 8005ebc901e866420ae60354b1d759ac 323 Gene3D G3DSA:3.20.20.100 1 323 3.8E-116 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_4035 8005ebc901e866420ae60354b1d759ac 323 SUPERFAMILY SSF51430 1 313 7.6E-99 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PA257_4035 8005ebc901e866420ae60354b1d759ac 323 Pfam PF00248 Aldo/keto reductase family 15 311 6.0E-71 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain PA257_4035 8005ebc901e866420ae60354b1d759ac 323 PRINTS PR00069 Aldo-keto reductase signature 45 69 1.6E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_4035 8005ebc901e866420ae60354b1d759ac 323 PRINTS PR00069 Aldo-keto reductase signature 142 159 1.6E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_4035 8005ebc901e866420ae60354b1d759ac 323 PRINTS PR00069 Aldo-keto reductase signature 111 129 1.6E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PA257_4565 ae9ca8bbc6d37021d2d90e68add6f674 503 SUPERFAMILY SSF103473 7 500 6.28E-60 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4565 ae9ca8bbc6d37021d2d90e68add6f674 503 Gene3D G3DSA:1.20.1720.10 19 220 4.1E-34 T 12-10-2018 PA257_4565 ae9ca8bbc6d37021d2d90e68add6f674 503 Pfam PF07690 Major Facilitator Superfamily 19 412 4.8E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4565 ae9ca8bbc6d37021d2d90e68add6f674 503 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 494 2.7E-107 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 PA257_2721 01a96065e53824e3f5fc8839bea3c9af 46 Gene3D G3DSA:1.10.1220.10 1 44 1.6E-10 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PA257_2721 01a96065e53824e3f5fc8839bea3c9af 46 Pfam PF03869 Arc-like DNA binding domain 1 37 1.1E-4 T 12-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 PA257_2721 01a96065e53824e3f5fc8839bea3c9af 46 SUPERFAMILY SSF47598 1 38 8.89E-6 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PA257_5859 44afa2024249289ada78beb586d3b3d6 154 Gene3D G3DSA:3.40.50.1470 1 154 7.3E-54 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 PA257_5859 44afa2024249289ada78beb586d3b3d6 154 Pfam PF01195 Peptidyl-tRNA hydrolase 10 149 9.5E-38 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PA257_5859 44afa2024249289ada78beb586d3b3d6 154 SUPERFAMILY SSF53178 3 151 3.4E-49 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 PA257_5859 44afa2024249289ada78beb586d3b3d6 154 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 150 1.6E-44 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PA257_5859 44afa2024249289ada78beb586d3b3d6 154 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 71 81 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PA257_1392 3aa7db152c39f52ee22d227a69c76377 346 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 45 321 3.3E-81 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PA257_1392 3aa7db152c39f52ee22d227a69c76377 346 Gene3D G3DSA:3.40.190.170 32 345 4.7E-106 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PA257_6721 4384a0796c86682593d9798bbb28a155 203 Gene3D G3DSA:3.30.63.10 34 93 3.0E-70 T 12-10-2018 PA257_6721 4384a0796c86682593d9798bbb28a155 203 SMART SM00072 2 184 8.3E-61 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PA257_6721 4384a0796c86682593d9798bbb28a155 203 SUPERFAMILY SSF52540 3 186 1.77E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6721 4384a0796c86682593d9798bbb28a155 203 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PA257_6721 4384a0796c86682593d9798bbb28a155 203 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 36.386 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 PA257_6721 4384a0796c86682593d9798bbb28a155 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 2.5E-74 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 PA257_6721 4384a0796c86682593d9798bbb28a155 203 Gene3D G3DSA:3.40.50.300 7 180 3.0E-70 T 12-10-2018 PA257_6721 4384a0796c86682593d9798bbb28a155 203 Pfam PF00625 Guanylate kinase 4 182 4.1E-54 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 Pfam PF03705 CheR methyltransferase, all-alpha domain 20 72 1.3E-15 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 Gene3D G3DSA:3.40.50.150 84 280 3.2E-63 T 12-10-2018 PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 SMART SM00138 19 280 4.8E-92 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 Gene3D G3DSA:1.10.155.10 10 83 6.9E-22 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 PRINTS PR00996 Glutamate methyltransferase family signature 220 234 1.1E-42 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 PRINTS PR00996 Glutamate methyltransferase family signature 239 262 1.1E-42 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 PRINTS PR00996 Glutamate methyltransferase family signature 41 54 1.1E-42 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 PRINTS PR00996 Glutamate methyltransferase family signature 148 164 1.1E-42 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 PRINTS PR00996 Glutamate methyltransferase family signature 78 90 1.1E-42 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 PRINTS PR00996 Glutamate methyltransferase family signature 114 134 1.1E-42 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 SUPERFAMILY SSF47757 12 84 1.57E-18 T 12-10-2018 PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 85 276 3.2E-55 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 SUPERFAMILY SSF53335 85 277 2.16E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0202 5c1a9ae42dbe507e5b1f47bb999d685e 280 PIRSF PIRSF000410 3 280 1.3E-94 T 12-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR PA257_0662 63b40831c9c5b6b98a950dc1671fe776 190 Gene3D G3DSA:1.20.120.80 10 190 2.1E-47 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0662 63b40831c9c5b6b98a950dc1671fe776 190 Pfam PF00510 Cytochrome c oxidase subunit III 16 188 2.0E-18 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_0662 63b40831c9c5b6b98a950dc1671fe776 190 SUPERFAMILY SSF81452 5 189 5.76E-49 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_6839 79fde186e83904d317ad26c4bdc7a4a3 241 Gene3D G3DSA:3.20.20.80 97 240 3.7E-5 T 12-10-2018 PA257_6839 79fde186e83904d317ad26c4bdc7a4a3 241 Pfam PF11340 Protein of unknown function (DUF3142) 99 184 2.0E-16 T 12-10-2018 IPR021488 Protein of unknown function DUF3142 PA257_6839 79fde186e83904d317ad26c4bdc7a4a3 241 SUPERFAMILY SSF51445 105 200 6.59E-7 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily PA257_0961 9a41a178e19d0108c9bf374c8d06d18f 402 SUPERFAMILY SSF103473 10 397 4.84E-64 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0961 9a41a178e19d0108c9bf374c8d06d18f 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 16 392 1.0E-93 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 PA257_0961 9a41a178e19d0108c9bf374c8d06d18f 402 Gene3D G3DSA:1.20.1720.10 17 394 1.6E-103 T 12-10-2018 PA257_0961 9a41a178e19d0108c9bf374c8d06d18f 402 Pfam PF07690 Major Facilitator Superfamily 25 237 1.1E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_5915 a2e21dfa245a3b04ed227be50bd583df 90 Gene3D G3DSA:1.10.150.20 2 86 2.5E-19 T 12-10-2018 PA257_5915 a2e21dfa245a3b04ed227be50bd583df 90 Pfam PF04994 TfoX C-terminal domain 1 80 1.0E-27 T 12-10-2018 IPR007077 TfoX, C-terminal PA257_1823 f507b8866c976ddc7ba2f7fb26321bf3 274 Gene3D G3DSA:1.10.3720.10 64 260 5.8E-22 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1823 f507b8866c976ddc7ba2f7fb26321bf3 274 SUPERFAMILY SSF161098 68 249 4.71E-30 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1823 f507b8866c976ddc7ba2f7fb26321bf3 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 261 3.5E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_6334 c5815b6e3a3f02944af6c6c094ffddd3 198 Pfam PF05137 Fimbrial assembly protein (PilN) 100 177 8.7E-21 T 12-10-2018 IPR007813 Fimbrial assembly PilN PA257_5604 bbfe392a953862f8cfd8ccbff091eb12 66 SUPERFAMILY SSF57716 2 55 1.3E-21 T 12-10-2018 PA257_5604 bbfe392a953862f8cfd8ccbff091eb12 66 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 57 19.522 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 PA257_5604 bbfe392a953862f8cfd8ccbff091eb12 66 Pfam PF03884 DNA gyrase inhibitor YacG 7 55 1.6E-26 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 PA257_5604 bbfe392a953862f8cfd8ccbff091eb12 66 Gene3D G3DSA:3.30.50.10 1 60 8.9E-25 T 12-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 PA257_0763 7c3409f527b9c1f2ec8bb6c18745363b 66 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PA257_0763 7c3409f527b9c1f2ec8bb6c18745363b 66 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 6.2E-17 T 12-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type PA257_0763 7c3409f527b9c1f2ec8bb6c18745363b 66 Gene3D G3DSA:1.20.120.910 2 66 2.9E-18 T 12-10-2018 PA257_0763 7c3409f527b9c1f2ec8bb6c18745363b 66 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 65 1.2E-13 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PA257_0763 7c3409f527b9c1f2ec8bb6c18745363b 66 SUPERFAMILY SSF57716 35 65 3.42E-7 T 12-10-2018 PA257_0763 7c3409f527b9c1f2ec8bb6c18745363b 66 PRINTS PR00618 DksA/TraR zinc finger signature 47 59 1.3E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PA257_0763 7c3409f527b9c1f2ec8bb6c18745363b 66 PRINTS PR00618 DksA/TraR zinc finger signature 35 46 1.3E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PA257_3027 c4e313a7feff69b5cbb2a992f2b00668 1221 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 900 1221 4.8E-59 T 12-10-2018 IPR007452 Translocation and assembly module TamB PA257_1696 33f92108572c09c09282b1510efcafb5 156 SUPERFAMILY SSF55826 2 153 1.27E-40 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_1696 33f92108572c09c09282b1510efcafb5 156 PIRSF PIRSF006181 1 156 5.5E-54 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PA257_1696 33f92108572c09c09282b1510efcafb5 156 Gene3D G3DSA:3.90.960.10 1 156 3.7E-55 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_1696 33f92108572c09c09282b1510efcafb5 156 Pfam PF04073 Aminoacyl-tRNA editing domain 32 142 8.3E-26 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PA257_1696 33f92108572c09c09282b1510efcafb5 156 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 153 1.3E-54 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PA257_6176 b8f724222a6b36b6d879610f43b5ff34 417 Pfam PF03573 outer membrane porin, OprD family 31 416 2.2E-147 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_6176 b8f724222a6b36b6d879610f43b5ff34 417 Gene3D G3DSA:2.40.160.10 35 417 8.1E-161 T 12-10-2018 IPR023614 Porin domain superfamily PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 248 6.9E-68 T 12-10-2018 PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 Gene3D G3DSA:3.40.50.720 2 253 2.1E-73 T 12-10-2018 PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.0E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.0E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.0E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 6.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 SUPERFAMILY SSF51735 9 249 5.0E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2190 e8ed7b3e741131cb9c8f6449f83f1cb1 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_1372 616b47d27f4b53378e4310324dade15c 198 SUPERFAMILY SSF140804 77 187 2.35E-29 T 12-10-2018 IPR027405 YidB-like PA257_1372 616b47d27f4b53378e4310324dade15c 198 Gene3D G3DSA:1.10.10.690 67 196 5.7E-31 T 12-10-2018 IPR027405 YidB-like PA257_1372 616b47d27f4b53378e4310324dade15c 198 Pfam PF06078 Bacterial protein of unknown function (DUF937) 37 180 5.2E-18 T 12-10-2018 IPR009282 Protein of unknown function DUF937 PA257_1432 ef6f4aa9cd7e86fef3f2e9a2b7ad3434 173 Gene3D G3DSA:1.10.357.40 8 171 6.6E-12 T 12-10-2018 IPR037238 YbiA-like superfamily PA257_1432 ef6f4aa9cd7e86fef3f2e9a2b7ad3434 173 Pfam PF08010 Bacteriophage protein GP30.3 29 163 1.0E-21 T 12-10-2018 IPR012596 Bacteriophage T4, Y12G PA257_1432 ef6f4aa9cd7e86fef3f2e9a2b7ad3434 173 SUPERFAMILY SSF143990 31 166 1.57E-19 T 12-10-2018 IPR037238 YbiA-like superfamily PA257_2677 bb5f2d0bb445c4b850b470ede09b6401 160 Pfam PF01740 STAS domain 7 103 4.2E-6 T 12-10-2018 IPR002645 STAS domain PA257_2677 bb5f2d0bb445c4b850b470ede09b6401 160 SUPERFAMILY SSF52091 6 106 2.75E-14 T 12-10-2018 IPR036513 STAS domain superfamily PA257_2677 bb5f2d0bb445c4b850b470ede09b6401 160 Gene3D G3DSA:3.30.750.24 3 107 1.0E-14 T 12-10-2018 IPR036513 STAS domain superfamily PA257_2677 bb5f2d0bb445c4b850b470ede09b6401 160 PIRSF PIRSF029548 1 160 2.0E-106 T 12-10-2018 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type PA257_6514 75f132d5cd41406f6909b7aafb9524cc 293 Pfam PF00483 Nucleotidyl transferase 4 240 4.1E-70 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PA257_6514 75f132d5cd41406f6909b7aafb9524cc 293 Gene3D G3DSA:3.90.550.10 1 293 3.2E-89 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6514 75f132d5cd41406f6909b7aafb9524cc 293 SUPERFAMILY SSF53448 1 288 5.85E-93 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6514 75f132d5cd41406f6909b7aafb9524cc 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 1.7E-162 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 PA257_3687 3b0469c00c5638a9f2b86428908d6c54 310 SUPERFAMILY SSF46689 204 254 8.96E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3687 3b0469c00c5638a9f2b86428908d6c54 310 Pfam PF06719 AraC-type transcriptional regulator N-terminus 41 191 1.0E-50 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal PA257_3687 3b0469c00c5638a9f2b86428908d6c54 310 SUPERFAMILY SSF46689 256 301 4.21E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3687 3b0469c00c5638a9f2b86428908d6c54 310 Gene3D G3DSA:1.10.10.60 203 308 9.0E-28 T 12-10-2018 PA257_3687 3b0469c00c5638a9f2b86428908d6c54 310 Pfam PF12833 Helix-turn-helix domain 226 300 1.1E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3687 3b0469c00c5638a9f2b86428908d6c54 310 SMART SM00342 220 303 6.5E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3687 3b0469c00c5638a9f2b86428908d6c54 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 257 299 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_5654 abfd2e80b78953b34d642df93900d9f6 442 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 35 350 2.4E-82 T 12-10-2018 IPR007001 Bacterial shufflon protein, N-terminal PA257_5654 abfd2e80b78953b34d642df93900d9f6 442 SUPERFAMILY SSF54523 12 77 2.83E-6 T 12-10-2018 PA257_1233 f1b970eb5b18ecca4c70cda08031cf72 560 SUPERFAMILY SSF56801 29 546 2.75E-131 T 12-10-2018 PA257_1233 f1b970eb5b18ecca4c70cda08031cf72 560 Pfam PF00501 AMP-binding enzyme 34 447 4.5E-89 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_1233 f1b970eb5b18ecca4c70cda08031cf72 560 Gene3D G3DSA:3.30.300.310 443 551 1.2E-29 T 12-10-2018 PA257_1233 f1b970eb5b18ecca4c70cda08031cf72 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 536 1.0E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PA257_1233 f1b970eb5b18ecca4c70cda08031cf72 560 Gene3D G3DSA:3.40.50.12780 14 442 6.4E-109 T 12-10-2018 PA257_0132 5bff5e48a661b647e616302b656e2e4c 69 Pfam PF11137 Protein of unknown function (DUF2909) 2 60 1.4E-20 T 12-10-2018 IPR021313 Protein of unknown function DUF2909 PA257_0472 a93945545a393f8ff423720c7e3c3baf 344 SUPERFAMILY SSF52540 5 335 1.69E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0472 a93945545a393f8ff423720c7e3c3baf 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_0472 a93945545a393f8ff423720c7e3c3baf 344 Gene3D G3DSA:3.30.450.90 1 100 9.9E-38 T 12-10-2018 PA257_0472 a93945545a393f8ff423720c7e3c3baf 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 6.8E-153 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 PA257_0472 a93945545a393f8ff423720c7e3c3baf 344 SMART SM00382 122 256 0.0063 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0472 a93945545a393f8ff423720c7e3c3baf 344 Pfam PF00437 Type II/IV secretion system protein 11 269 1.7E-45 T 12-10-2018 IPR001482 Type II/IV secretion system protein PA257_0472 a93945545a393f8ff423720c7e3c3baf 344 Gene3D G3DSA:3.40.50.300 101 344 2.4E-110 T 12-10-2018 PA257_6433 441e4340d31d66c3f3c176b22162d459 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 248 7.2E-21 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6433 441e4340d31d66c3f3c176b22162d459 248 Gene3D G3DSA:3.40.190.10 118 209 3.0E-27 T 12-10-2018 PA257_6433 441e4340d31d66c3f3c176b22162d459 248 Gene3D G3DSA:3.40.190.10 48 248 3.0E-27 T 12-10-2018 PA257_6433 441e4340d31d66c3f3c176b22162d459 248 SUPERFAMILY SSF53850 25 248 3.1E-37 T 12-10-2018 PA257_4315 76768c6a81cef4d77da2fa049f374904 162 Gene3D G3DSA:2.40.50.140 30 137 3.1E-40 T 12-10-2018 PA257_4315 76768c6a81cef4d77da2fa049f374904 162 SUPERFAMILY SSF82093 30 137 2.22E-40 T 12-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 PA257_4315 76768c6a81cef4d77da2fa049f374904 162 Pfam PF03100 CcmE 5 131 1.3E-47 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 PA257_4315 76768c6a81cef4d77da2fa049f374904 162 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 141 33.684 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 PA257_2977 e08ed41b13c96631e7b4f33fc7ff10d1 94 Gene3D G3DSA:2.60.40.1090 1 93 8.9E-13 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 PA257_2977 e08ed41b13c96631e7b4f33fc7ff10d1 94 Pfam PF00419 Fimbrial protein 7 93 4.4E-7 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PA257_2977 e08ed41b13c96631e7b4f33fc7ff10d1 94 SUPERFAMILY SSF49401 1 94 6.96E-12 T 12-10-2018 IPR008966 Adhesion domain superfamily PA257_4108 4d4a29e0d262254ce4a0710a85266ece 443 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 441 5.2E-142 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 PA257_4108 4d4a29e0d262254ce4a0710a85266ece 443 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.2E-152 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 PA257_4367 740d1fef58984f6f8ac92e90a10ae83a 529 Gene3D G3DSA:2.130.10.10 404 522 1.8E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_4367 740d1fef58984f6f8ac92e90a10ae83a 529 SUPERFAMILY SSF50998 19 511 1.18E-21 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PA257_4367 740d1fef58984f6f8ac92e90a10ae83a 529 Gene3D G3DSA:2.130.10.10 14 148 2.6E-5 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_4290 07c4964980d1706293e9224e826bc650 143 SUPERFAMILY SSF143744 2 136 2.22E-34 T 12-10-2018 IPR038084 GlcG-like domain superfamily PA257_4290 07c4964980d1706293e9224e826bc650 143 Pfam PF03928 Haem-degrading 4 133 8.3E-27 T 12-10-2018 IPR005624 Haem-degrading PA257_4290 07c4964980d1706293e9224e826bc650 143 Gene3D G3DSA:3.30.450.150 1 138 7.4E-34 T 12-10-2018 IPR038084 GlcG-like domain superfamily PA257_5948 10133a69f441ffc2c4a179aa206b2f2b 293 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 42 272 2.5E-57 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 PA257_3054 87b9fc3ba54fc739867886a000aa8b48 162 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 9 162 4.8E-84 T 12-10-2018 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0055114 PA257_3054 87b9fc3ba54fc739867886a000aa8b48 162 Pfam PF00866 Ring hydroxylating beta subunit 14 154 8.6E-48 T 12-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 PA257_3054 87b9fc3ba54fc739867886a000aa8b48 162 Gene3D G3DSA:3.10.450.50 2 162 2.0E-46 T 12-10-2018 PA257_3054 87b9fc3ba54fc739867886a000aa8b48 162 SUPERFAMILY SSF54427 5 161 5.2E-53 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_1899 86a8c777e8f49e583210282c7cc5ca06 387 Gene3D G3DSA:3.20.20.140 1 267 8.4E-13 T 12-10-2018 PA257_1899 86a8c777e8f49e583210282c7cc5ca06 387 SUPERFAMILY SSF51338 3 385 7.44E-11 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_1899 86a8c777e8f49e583210282c7cc5ca06 387 Gene3D G3DSA:2.30.40.10 313 387 4.6E-5 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_1899 86a8c777e8f49e583210282c7cc5ca06 387 PIRSF PIRSF038971 3 387 2.3E-146 T 12-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_1899 86a8c777e8f49e583210282c7cc5ca06 387 SUPERFAMILY SSF51556 54 353 8.85E-16 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_1899 86a8c777e8f49e583210282c7cc5ca06 387 Pfam PF07969 Amidohydrolase family 179 387 3.1E-7 T 12-10-2018 IPR013108 Amidohydrolase 3 PA257_1899 86a8c777e8f49e583210282c7cc5ca06 387 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 387 2.4E-149 T 12-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_0156 88ef7ef97b92cde4e92600ec88258018 305 Pfam PF03466 LysR substrate binding domain 101 302 2.6E-25 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0156 88ef7ef97b92cde4e92600ec88258018 305 Gene3D G3DSA:3.40.190.290 104 304 2.9E-12 T 12-10-2018 PA257_0156 88ef7ef97b92cde4e92600ec88258018 305 SUPERFAMILY SSF53850 97 302 4.71E-24 T 12-10-2018 PA257_0156 88ef7ef97b92cde4e92600ec88258018 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 76 3.8E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_0156 88ef7ef97b92cde4e92600ec88258018 305 Gene3D G3DSA:1.10.10.10 15 102 5.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0156 88ef7ef97b92cde4e92600ec88258018 305 SUPERFAMILY SSF46785 16 101 3.44E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5409 f5fe987eedb44ea36dd005bb18d817c8 196 SUPERFAMILY SSF101874 19 188 4.05E-22 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PA257_5409 f5fe987eedb44ea36dd005bb18d817c8 196 PIRSF PIRSF029811 1 191 2.8E-69 T 12-10-2018 IPR027016 Uncharacterised protein with YceI domain PA257_5409 f5fe987eedb44ea36dd005bb18d817c8 196 Gene3D G3DSA:2.40.128.110 16 194 5.4E-47 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PA257_5409 f5fe987eedb44ea36dd005bb18d817c8 196 Pfam PF04264 YceI-like domain 21 162 1.2E-12 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PA257_5409 f5fe987eedb44ea36dd005bb18d817c8 196 SMART SM00867 20 189 7.3E-19 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PA257_6767 fc3106fe9ccc82ad0c6b1ffaef82c35e 490 Gene3D G3DSA:3.40.309.10 255 486 6.9E-82 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_6767 fc3106fe9ccc82ad0c6b1ffaef82c35e 490 Gene3D G3DSA:3.40.605.10 2 254 4.1E-110 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_6767 fc3106fe9ccc82ad0c6b1ffaef82c35e 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 59.136 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 PA257_6767 fc3106fe9ccc82ad0c6b1ffaef82c35e 490 SUPERFAMILY SSF53720 5 483 3.93E-178 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_6767 fc3106fe9ccc82ad0c6b1ffaef82c35e 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 7.9E-182 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_6767 fc3106fe9ccc82ad0c6b1ffaef82c35e 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PA257_6767 fc3106fe9ccc82ad0c6b1ffaef82c35e 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_6767 fc3106fe9ccc82ad0c6b1ffaef82c35e 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 1.1E-227 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 PA257_4730 0b045ffad4d3ed12fd6d2a1293375829 314 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 214 302 9.1E-26 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_4730 0b045ffad4d3ed12fd6d2a1293375829 314 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 82 152 3.2E-7 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PA257_4730 0b045ffad4d3ed12fd6d2a1293375829 314 SUPERFAMILY SSF53901 10 302 1.0E-41 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_4730 0b045ffad4d3ed12fd6d2a1293375829 314 Gene3D G3DSA:3.40.47.10 2 314 6.1E-95 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 PA257_3277 d2d6d094b126aaecc3ea215749e2db76 181 PIRSF PIRSF028301 1 175 6.1E-65 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PA257_3277 d2d6d094b126aaecc3ea215749e2db76 181 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 160 4.1E-54 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PA257_3277 d2d6d094b126aaecc3ea215749e2db76 181 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 163 1.4E-58 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PA257_6033 bb326d1f71e4173dfb9d0bf82c2f8ab3 492 Pfam PF06074 Protein of unknown function (DUF935) 51 480 3.0E-80 T 12-10-2018 IPR009279 Protein of unknown function DUF935 PA257_6730 935590f0a244a1c748ceaae8427e68fb 310 Gene3D G3DSA:1.10.10.10 1 85 2.2E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_6730 935590f0a244a1c748ceaae8427e68fb 310 Gene3D G3DSA:3.40.190.10 92 291 4.1E-89 T 12-10-2018 PA257_6730 935590f0a244a1c748ceaae8427e68fb 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6730 935590f0a244a1c748ceaae8427e68fb 310 SUPERFAMILY SSF46785 1 85 6.2E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_6730 935590f0a244a1c748ceaae8427e68fb 310 Gene3D G3DSA:3.40.190.10 161 268 4.1E-89 T 12-10-2018 PA257_6730 935590f0a244a1c748ceaae8427e68fb 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6730 935590f0a244a1c748ceaae8427e68fb 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6730 935590f0a244a1c748ceaae8427e68fb 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_6730 935590f0a244a1c748ceaae8427e68fb 310 Pfam PF03466 LysR substrate binding domain 88 294 7.7E-44 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_6730 935590f0a244a1c748ceaae8427e68fb 310 SUPERFAMILY SSF53850 88 294 1.02E-37 T 12-10-2018 PA257_2270 78cd30d6bfad44c993df279ff032d902 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 2.0E-21 T 12-10-2018 IPR010305 Protein of unknown function DUF903 PA257_2270 78cd30d6bfad44c993df279ff032d902 73 Gene3D G3DSA:2.30.30.100 21 73 1.7E-20 T 12-10-2018 PA257_2270 78cd30d6bfad44c993df279ff032d902 73 SUPERFAMILY SSF50182 22 72 2.29E-16 T 12-10-2018 IPR010920 LSM domain superfamily PA257_0109 d4f1aa74b152b51b328b2b2e1be3ed85 619 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 618 7.4E-211 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like PA257_0109 d4f1aa74b152b51b328b2b2e1be3ed85 619 PIRSF PIRSF028304 1 619 1.4E-191 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like PA257_0109 d4f1aa74b152b51b328b2b2e1be3ed85 619 Pfam PF05947 Type VI secretion system, TssF 6 617 4.2E-229 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like PA257_5091 b9a4e525153d0624e3ed754b29dcd643 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.5E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5091 b9a4e525153d0624e3ed754b29dcd643 317 Gene3D G3DSA:3.40.190.10 94 285 8.9E-14 T 12-10-2018 PA257_5091 b9a4e525153d0624e3ed754b29dcd643 317 Gene3D G3DSA:1.10.10.10 1 93 7.7E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5091 b9a4e525153d0624e3ed754b29dcd643 317 SUPERFAMILY SSF46785 3 88 4.15E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5091 b9a4e525153d0624e3ed754b29dcd643 317 Gene3D G3DSA:3.40.190.10 176 279 8.9E-14 T 12-10-2018 PA257_5091 b9a4e525153d0624e3ed754b29dcd643 317 Pfam PF03466 LysR substrate binding domain 89 303 2.3E-34 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_5091 b9a4e525153d0624e3ed754b29dcd643 317 SUPERFAMILY SSF53850 90 307 2.71E-24 T 12-10-2018 PA257_2119 7eaee7cc209bb0298f20d37119bafb8b 220 Gene3D G3DSA:3.20.20.70 1 215 2.7E-74 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2119 7eaee7cc209bb0298f20d37119bafb8b 220 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 131 144 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PA257_2119 7eaee7cc209bb0298f20d37119bafb8b 220 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 43 52 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PA257_2119 7eaee7cc209bb0298f20d37119bafb8b 220 Pfam PF01081 KDPG and KHG aldolase 11 206 1.6E-79 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PA257_2119 7eaee7cc209bb0298f20d37119bafb8b 220 SUPERFAMILY SSF51569 10 213 2.56E-67 T 12-10-2018 PA257_2119 7eaee7cc209bb0298f20d37119bafb8b 220 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 12 213 2.7E-86 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PA257_3477 1c3f8035e6524fe801110ddc3ae9af2e 41 Pfam PF01527 Transposase 3 35 1.0E-6 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_5744 afffc16d668532bfbdd991c41758b044 103 SUPERFAMILY SSF141091 1 102 9.03E-39 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5744 afffc16d668532bfbdd991c41758b044 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 7.6E-43 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5744 afffc16d668532bfbdd991c41758b044 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_5744 afffc16d668532bfbdd991c41758b044 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.193 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5744 afffc16d668532bfbdd991c41758b044 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 4.0E-40 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_5923 9d7cdfddb4f3e69e021de84d9b3ea3fa 764 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 34 761 3.1E-161 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 PA257_5923 9d7cdfddb4f3e69e021de84d9b3ea3fa 764 SUPERFAMILY SSF56935 35 760 2.38E-122 T 12-10-2018 PA257_5923 9d7cdfddb4f3e69e021de84d9b3ea3fa 764 Pfam PF00593 TonB dependent receptor 273 761 1.3E-64 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_5923 9d7cdfddb4f3e69e021de84d9b3ea3fa 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 155 5.9E-28 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_5923 9d7cdfddb4f3e69e021de84d9b3ea3fa 764 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 33 760 3.8E-126 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 PA257_5923 9d7cdfddb4f3e69e021de84d9b3ea3fa 764 Gene3D G3DSA:2.170.130.10 33 160 1.1E-36 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_5923 9d7cdfddb4f3e69e021de84d9b3ea3fa 764 Gene3D G3DSA:2.40.170.20 171 763 3.1E-129 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_3061 c8745e52b3bb21105dcc2d90ec96876e 333 SUPERFAMILY SSF46689 225 275 1.21E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3061 c8745e52b3bb21105dcc2d90ec96876e 333 Pfam PF12833 Helix-turn-helix domain 249 328 3.4E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3061 c8745e52b3bb21105dcc2d90ec96876e 333 Gene3D G3DSA:1.10.10.60 225 330 6.1E-30 T 12-10-2018 PA257_3061 c8745e52b3bb21105dcc2d90ec96876e 333 SMART SM00342 241 326 5.0E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_3061 c8745e52b3bb21105dcc2d90ec96876e 333 Pfam PF14525 AraC-binding-like domain 23 204 3.1E-36 T 12-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like PA257_3061 c8745e52b3bb21105dcc2d90ec96876e 333 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 278 322 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_6586 a74263dbd29225d8b08ee6dbba11892e 139 Pfam PF03748 Flagellar basal body-associated protein FliL 37 138 2.6E-21 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PA257_4212 a91d3c009cd1c88c0bf469dbfbe66e99 381 SUPERFAMILY SSF111331 91 174 2.14E-5 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PA257_4212 a91d3c009cd1c88c0bf469dbfbe66e99 381 Pfam PF01513 ATP-NAD kinase 5 367 1.2E-67 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 PA257_4212 a91d3c009cd1c88c0bf469dbfbe66e99 381 PIRSF PIRSF016907 2 371 1.6E-145 T 12-10-2018 IPR011386 Putative ATP-NAD kinase PA257_0474 22e083329ea532558f91a9122437bb21 299 SUPERFAMILY SSF160240 213 286 1.57E-8 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 PA257_0474 22e083329ea532558f91a9122437bb21 299 Gene3D G3DSA:1.20.1510.10 15 208 9.5E-45 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PA257_0474 22e083329ea532558f91a9122437bb21 299 Pfam PF01545 Cation efflux family 19 208 3.1E-45 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PA257_0474 22e083329ea532558f91a9122437bb21 299 SUPERFAMILY SSF161111 13 209 1.22E-55 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PA257_0474 22e083329ea532558f91a9122437bb21 299 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 289 2.9E-88 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PA257_4184 42de58b804f01ef02b766a2ccf32a7d3 273 Gene3D G3DSA:3.20.20.60 8 273 7.8E-95 T 12-10-2018 PA257_4184 42de58b804f01ef02b766a2ccf32a7d3 273 SUPERFAMILY SSF51621 10 269 3.51E-94 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_4184 42de58b804f01ef02b766a2ccf32a7d3 273 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 264 2.1E-99 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PA257_4184 42de58b804f01ef02b766a2ccf32a7d3 273 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.55 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PA257_4184 42de58b804f01ef02b766a2ccf32a7d3 273 PIRSF PIRSF000388 1 272 2.3E-99 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PA257_4184 42de58b804f01ef02b766a2ccf32a7d3 273 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 15 269 9.8E-93 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PA257_2240 a6c93fe059722e6483e76a17b6a148da 507 Gene3D G3DSA:3.40.50.2000 21 310 6.8E-9 T 12-10-2018 PA257_2240 a6c93fe059722e6483e76a17b6a148da 507 Pfam PF13692 Glycosyl transferases group 1 318 468 6.6E-22 T 12-10-2018 PA257_2240 a6c93fe059722e6483e76a17b6a148da 507 Gene3D G3DSA:3.40.50.2000 311 488 1.3E-33 T 12-10-2018 PA257_2240 a6c93fe059722e6483e76a17b6a148da 507 Pfam PF11997 Domain of unknown function (DUF3492) 12 290 5.7E-92 T 12-10-2018 IPR022622 Domain of unknown function DUF3492 PA257_2240 a6c93fe059722e6483e76a17b6a148da 507 SUPERFAMILY SSF53756 16 502 5.58E-59 T 12-10-2018 PA257_1751 670a8f342c47841e89fce46e222d406d 383 Pfam PF07690 Major Facilitator Superfamily 14 318 4.7E-18 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1751 670a8f342c47841e89fce46e222d406d 383 Gene3D G3DSA:1.20.1250.20 10 193 2.9E-13 T 12-10-2018 PA257_1751 670a8f342c47841e89fce46e222d406d 383 Gene3D G3DSA:1.20.1250.20 199 376 3.5E-21 T 12-10-2018 PA257_1751 670a8f342c47841e89fce46e222d406d 383 SUPERFAMILY SSF103473 11 381 3.4E-39 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4896 f1064be2661426b38260d1e0419f8782 238 Pfam PF11306 Protein of unknown function (DUF3108) 19 220 2.7E-19 T 12-10-2018 IPR021457 Protein of unknown function DUF3108 PA257_4374 10e510fd2ecaa4ce00b37e638af9fa11 139 Gene3D G3DSA:3.10.450.50 4 134 2.4E-19 T 12-10-2018 PA257_4374 10e510fd2ecaa4ce00b37e638af9fa11 139 SUPERFAMILY SSF54427 2 131 1.35E-22 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_4374 10e510fd2ecaa4ce00b37e638af9fa11 139 Pfam PF13474 SnoaL-like domain 9 131 2.4E-16 T 12-10-2018 IPR037401 SnoaL-like domain PA257_3614 a24b25155d1f8fa3b699eb44982d6702 142 Gene3D G3DSA:3.10.450.50 1 142 2.6E-51 T 12-10-2018 PA257_3614 a24b25155d1f8fa3b699eb44982d6702 142 Pfam PF12680 SnoaL-like domain 16 111 4.7E-9 T 12-10-2018 IPR037401 SnoaL-like domain PA257_3614 a24b25155d1f8fa3b699eb44982d6702 142 SUPERFAMILY SSF54427 10 118 6.86E-20 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_2798 209f83a5d5ac4f112a5195fb36fcff86 287 Pfam PF12697 Alpha/beta hydrolase family 26 268 1.8E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2798 209f83a5d5ac4f112a5195fb36fcff86 287 SUPERFAMILY SSF53474 7 277 9.19E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2798 209f83a5d5ac4f112a5195fb36fcff86 287 Gene3D G3DSA:3.40.50.1820 5 283 6.4E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2131 90ced376993022f571b94c57a2b69bb9 444 Gene3D G3DSA:3.20.20.140 67 357 9.2E-177 T 12-10-2018 PA257_2131 90ced376993022f571b94c57a2b69bb9 444 SUPERFAMILY SSF51338 9 438 3.38E-25 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_2131 90ced376993022f571b94c57a2b69bb9 444 Gene3D G3DSA:2.30.40.10 17 432 9.2E-177 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_2131 90ced376993022f571b94c57a2b69bb9 444 SUPERFAMILY SSF51556 66 365 1.77E-94 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_2131 90ced376993022f571b94c57a2b69bb9 444 Pfam PF01979 Amidohydrolase family 64 412 1.9E-68 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_0538 a3694ff9795a41c914356700453ce477 170 SUPERFAMILY SSF53271 8 155 7.53E-35 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like PA257_0538 a3694ff9795a41c914356700453ce477 170 Gene3D G3DSA:3.40.50.2020 7 164 2.8E-39 T 12-10-2018 PA257_0538 a3694ff9795a41c914356700453ce477 170 Pfam PF00156 Phosphoribosyl transferase domain 20 136 1.1E-16 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PA257_0538 a3694ff9795a41c914356700453ce477 170 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 1 168 28.031 T 12-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PA257_4627 f1016aa9a8f1ad42db733ab51b452e23 448 SMART SM00388 238 300 5.6E-4 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PA257_4627 f1016aa9a8f1ad42db733ab51b452e23 448 SMART SM00387 343 448 1.0E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4627 f1016aa9a8f1ad42db733ab51b452e23 448 SUPERFAMILY SSF47384 221 292 1.37E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PA257_4627 f1016aa9a8f1ad42db733ab51b452e23 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 6.2E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4627 f1016aa9a8f1ad42db733ab51b452e23 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 6.2E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PA257_4627 f1016aa9a8f1ad42db733ab51b452e23 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 445 1.6E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PA257_4627 f1016aa9a8f1ad42db733ab51b452e23 448 SUPERFAMILY SSF55874 308 445 2.23E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4627 f1016aa9a8f1ad42db733ab51b452e23 448 Gene3D G3DSA:1.10.287.130 190 300 1.4E-9 T 12-10-2018 PA257_4627 f1016aa9a8f1ad42db733ab51b452e23 448 Gene3D G3DSA:3.30.565.10 305 447 5.1E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PA257_4167 79ecd4a80c29b2a6a5c46ab7477fdd65 113 Pfam PF14333 Domain of unknown function (DUF4389) 8 83 2.6E-29 T 12-10-2018 IPR025498 Protein of unknown function DUF4389 PA257_4419 19c448ca179a669e4b7b67db39b3d523 177 Gene3D G3DSA:3.40.630.30 1 177 3.9E-54 T 12-10-2018 PA257_4419 19c448ca179a669e4b7b67db39b3d523 177 SUPERFAMILY SSF55729 1 169 1.6E-39 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_4419 19c448ca179a669e4b7b67db39b3d523 177 Pfam PF00583 Acetyltransferase (GNAT) family 43 143 1.6E-15 T 12-10-2018 IPR000182 GNAT domain PA257_2918 6ab86feb224a51179bda043ce2ef2b5a 137 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 1.0E-33 T 12-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2918 6ab86feb224a51179bda043ce2ef2b5a 137 Gene3D G3DSA:1.20.58.1610 2 124 6.1E-42 T 12-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2918 6ab86feb224a51179bda043ce2ef2b5a 137 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 20.119 T 12-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 PA257_4387 cc93d0659df514c971c66bb409e8e9d7 807 SUPERFAMILY SSF82861 540 624 3.92E-13 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PA257_4387 cc93d0659df514c971c66bb409e8e9d7 807 SUPERFAMILY SSF50182 626 691 6.21E-16 T 12-10-2018 IPR010920 LSM domain superfamily PA257_4387 cc93d0659df514c971c66bb409e8e9d7 807 Gene3D G3DSA:3.30.70.100 699 786 5.2E-11 T 12-10-2018 PA257_4387 cc93d0659df514c971c66bb409e8e9d7 807 Pfam PF00924 Mechanosensitive ion channel 584 781 4.3E-42 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PA257_4387 cc93d0659df514c971c66bb409e8e9d7 807 SUPERFAMILY SSF82689 700 792 4.18E-14 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PA257_4387 cc93d0659df514c971c66bb409e8e9d7 807 Gene3D G3DSA:2.30.30.60 641 689 1.1E-12 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PA257_4387 cc93d0659df514c971c66bb409e8e9d7 807 Pfam PF12607 Protein of unknown function (DUF3772) 140 200 4.3E-19 T 12-10-2018 IPR022249 Domain of unknown function DUF3772 PA257_3960 a9351ee97561429920cc14370b0ed064 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 1.6E-42 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PA257_3960 a9351ee97561429920cc14370b0ed064 436 SUPERFAMILY SSF102735 1 130 1.31E-40 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 PA257_3960 a9351ee97561429920cc14370b0ed064 436 Gene3D G3DSA:3.10.50.40 150 246 6.6E-97 T 12-10-2018 PA257_3960 a9351ee97561429920cc14370b0ed064 436 SUPERFAMILY SSF54534 90 241 2.75E-34 T 12-10-2018 PA257_3960 a9351ee97561429920cc14370b0ed064 436 Hamap MF_00303 Trigger factor [tig]. 1 417 21.484 T 12-10-2018 IPR005215 Trigger factor GO:0015031 PA257_3960 a9351ee97561429920cc14370b0ed064 436 PIRSF PIRSF003095 1 432 3.3E-123 T 12-10-2018 IPR005215 Trigger factor GO:0015031 PA257_3960 a9351ee97561429920cc14370b0ed064 436 Gene3D G3DSA:1.10.3120.10 116 416 6.6E-97 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 PA257_3960 a9351ee97561429920cc14370b0ed064 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 236 2.2E-12 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PA257_3960 a9351ee97561429920cc14370b0ed064 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 411 3.1E-36 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PA257_3960 a9351ee97561429920cc14370b0ed064 436 TIGRFAM TIGR00115 tig: trigger factor 11 410 1.5E-138 T 12-10-2018 IPR005215 Trigger factor GO:0015031 PA257_3960 a9351ee97561429920cc14370b0ed064 436 Gene3D G3DSA:3.30.70.1050 1 115 4.8E-41 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 PA257_3960 a9351ee97561429920cc14370b0ed064 436 SUPERFAMILY SSF109998 248 428 8.63E-47 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily PA257_6859 b827eb23fdb485bc9459b50aa04f9e9c 278 Pfam PF08241 Methyltransferase domain 64 158 1.5E-17 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PA257_6859 b827eb23fdb485bc9459b50aa04f9e9c 278 Gene3D G3DSA:3.40.50.150 32 275 4.5E-32 T 12-10-2018 PA257_6859 b827eb23fdb485bc9459b50aa04f9e9c 278 SUPERFAMILY SSF53335 49 229 4.41E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1327 e2cc4b703f1a3ec447c8127efcf7fd5f 610 Pfam PF03600 Citrate transporter 17 555 4.2E-58 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 PA257_1327 e2cc4b703f1a3ec447c8127efcf7fd5f 610 Pfam PF02080 TrkA-C domain 232 300 2.3E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PA257_1327 e2cc4b703f1a3ec447c8127efcf7fd5f 610 Pfam PF02080 TrkA-C domain 326 392 4.0E-12 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PA257_1327 e2cc4b703f1a3ec447c8127efcf7fd5f 610 SUPERFAMILY SSF116726 317 393 2.75E-17 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PA257_1327 e2cc4b703f1a3ec447c8127efcf7fd5f 610 Gene3D G3DSA:3.30.70.1450 323 398 4.8E-15 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PA257_1327 e2cc4b703f1a3ec447c8127efcf7fd5f 610 SUPERFAMILY SSF116726 232 307 8.89E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PA257_1327 e2cc4b703f1a3ec447c8127efcf7fd5f 610 Gene3D G3DSA:3.30.70.1450 231 302 3.5E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PA257_1327 e2cc4b703f1a3ec447c8127efcf7fd5f 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 12-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 PA257_1215 b4e3cdf7dcb74bc003ad80259969a060 198 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 170 9.3E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_1215 b4e3cdf7dcb74bc003ad80259969a060 198 Pfam PF13419 Haloacid dehalogenase-like hydrolase 42 170 2.5E-17 T 12-10-2018 PA257_1215 b4e3cdf7dcb74bc003ad80259969a060 198 Gene3D G3DSA:3.40.50.1000 7 186 5.5E-68 T 12-10-2018 IPR023214 HAD superfamily PA257_1215 b4e3cdf7dcb74bc003ad80259969a060 198 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 10 164 2.9E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PA257_1215 b4e3cdf7dcb74bc003ad80259969a060 198 SUPERFAMILY SSF56784 5 195 2.04E-38 T 12-10-2018 IPR036412 HAD-like superfamily PA257_1215 b4e3cdf7dcb74bc003ad80259969a060 198 Gene3D G3DSA:1.10.260.80 19 69 5.5E-68 T 12-10-2018 PA257_3631 cc97fc3ac195b91ba935b7bd318ff50c 132 Gene3D G3DSA:1.20.1270.360 31 132 5.0E-44 T 12-10-2018 PA257_3631 cc97fc3ac195b91ba935b7bd318ff50c 132 Pfam PF03860 Domain of Unknown Function (DUF326) 111 128 5.2E-5 T 12-10-2018 IPR005560 Protein of unknown function DUF326 PA257_3590 a0df7ed1934f15c1fcdb3eb498b2184c 79 Gene3D G3DSA:2.30.170.10 1 51 9.4E-11 T 12-10-2018 PA257_3590 a0df7ed1934f15c1fcdb3eb498b2184c 79 Pfam PF02069 Prokaryotic metallothionein 5 49 1.4E-12 T 12-10-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 PA257_3590 a0df7ed1934f15c1fcdb3eb498b2184c 79 SUPERFAMILY SSF57868 5 50 1.65E-11 T 12-10-2018 IPR017854 Metallothionein domain superfamily GO:0046872 PA257_3590 a0df7ed1934f15c1fcdb3eb498b2184c 79 ProDom PD019076 METALLOTHIONEIN METALLOTHIONEIN ZINC METAL-BINDING CADMIUM CLUSTER MT METAL-THIOLATE COPPER SMTA 6 49 8.0E-18 T 12-10-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 PA257_3109 2f1c3781b1d9a216ad320789d77e7ff3 820 Gene3D G3DSA:2.40.170.20 288 820 3.1E-148 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_3109 2f1c3781b1d9a216ad320789d77e7ff3 820 Pfam PF07715 TonB-dependent Receptor Plug Domain 173 277 2.7E-21 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_3109 2f1c3781b1d9a216ad320789d77e7ff3 820 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 174 820 2.3E-147 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PA257_3109 2f1c3781b1d9a216ad320789d77e7ff3 820 Gene3D G3DSA:3.55.50.30 57 127 2.8E-24 T 12-10-2018 PA257_3109 2f1c3781b1d9a216ad320789d77e7ff3 820 Gene3D G3DSA:2.170.130.10 150 287 7.2E-37 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_3109 2f1c3781b1d9a216ad320789d77e7ff3 820 Pfam PF00593 TonB dependent receptor 355 819 4.5E-70 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_3109 2f1c3781b1d9a216ad320789d77e7ff3 820 SUPERFAMILY SSF56935 135 820 1.36E-144 T 12-10-2018 PA257_3109 2f1c3781b1d9a216ad320789d77e7ff3 820 SMART SM00965 78 129 2.9E-9 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PA257_0549 29efb729e234e29ba48f005ead315332 343 Pfam PF01339 CheB methylesterase 153 328 1.3E-39 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_0549 29efb729e234e29ba48f005ead315332 343 Gene3D G3DSA:3.40.50.180 145 332 3.3E-45 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal PA257_0549 29efb729e234e29ba48f005ead315332 343 SUPERFAMILY SSF52172 4 61 3.56E-5 T 12-10-2018 IPR011006 CheY-like superfamily PA257_0549 29efb729e234e29ba48f005ead315332 343 SUPERFAMILY SSF52738 149 332 6.15E-46 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal PA257_0549 29efb729e234e29ba48f005ead315332 343 PIRSF PIRSF000876 4 337 3.2E-65 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PA257_0375 e0f7549190d8e9cde56e794c5e379297 191 SUPERFAMILY SSF52833 44 189 1.59E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_0375 e0f7549190d8e9cde56e794c5e379297 191 Gene3D G3DSA:3.40.30.10 35 190 3.5E-9 T 12-10-2018 PA257_3366 af7b72a9df760aedd77c7630957429fd 427 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 1.3E-201 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PA257_3366 af7b72a9df760aedd77c7630957429fd 427 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 2.7E-109 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PA257_3366 af7b72a9df760aedd77c7630957429fd 427 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 2.7E-109 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PA257_3366 af7b72a9df760aedd77c7630957429fd 427 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 2.7E-109 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PA257_3366 af7b72a9df760aedd77c7630957429fd 427 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 2.7E-109 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PA257_3366 af7b72a9df760aedd77c7630957429fd 427 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 2.7E-109 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PA257_3366 af7b72a9df760aedd77c7630957429fd 427 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 2.7E-109 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PA257_3366 af7b72a9df760aedd77c7630957429fd 427 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 2.7E-109 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PA257_3366 af7b72a9df760aedd77c7630957429fd 427 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 2.7E-109 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PA257_3366 af7b72a9df760aedd77c7630957429fd 427 Pfam PF02040 Arsenical pump membrane protein 4 422 6.9E-150 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PA257_6077 80a33e96a8e076dabb786dcec3e72b81 468 Gene3D G3DSA:3.40.640.10 74 353 2.9E-158 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6077 80a33e96a8e076dabb786dcec3e72b81 468 PIRSF PIRSF000521 17 458 1.2E-24 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_6077 80a33e96a8e076dabb786dcec3e72b81 468 Pfam PF00202 Aminotransferase class-III 39 452 1.7E-83 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_6077 80a33e96a8e076dabb786dcec3e72b81 468 Gene3D G3DSA:3.90.1150.10 20 455 2.9E-158 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_6077 80a33e96a8e076dabb786dcec3e72b81 468 SUPERFAMILY SSF53383 20 457 9.85E-114 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_1580 b92a688c2b6b44ecaaea7d93df9b0c10 471 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 437 1.5E-152 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_1580 b92a688c2b6b44ecaaea7d93df9b0c10 471 Pfam PF01235 Sodium:alanine symporter family 53 448 1.2E-160 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_1580 b92a688c2b6b44ecaaea7d93df9b0c10 471 PRINTS PR00175 Sodium/alanine symporter signature 210 229 9.2E-59 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_1580 b92a688c2b6b44ecaaea7d93df9b0c10 471 PRINTS PR00175 Sodium/alanine symporter signature 406 426 9.2E-59 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_1580 b92a688c2b6b44ecaaea7d93df9b0c10 471 PRINTS PR00175 Sodium/alanine symporter signature 345 367 9.2E-59 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_1580 b92a688c2b6b44ecaaea7d93df9b0c10 471 PRINTS PR00175 Sodium/alanine symporter signature 182 200 9.2E-59 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_1580 b92a688c2b6b44ecaaea7d93df9b0c10 471 PRINTS PR00175 Sodium/alanine symporter signature 91 113 9.2E-59 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_1580 b92a688c2b6b44ecaaea7d93df9b0c10 471 PRINTS PR00175 Sodium/alanine symporter signature 303 321 9.2E-59 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PA257_6286 5fbef520ae5fa18edd6d9abcb419fd92 216 Gene3D G3DSA:1.10.510.10 94 181 2.4E-5 T 12-10-2018 PA257_6286 5fbef520ae5fa18edd6d9abcb419fd92 216 SUPERFAMILY SSF56112 15 157 7.46E-16 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_5684 f4af64d574cf9f2693157b374e46d323 166 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 63 166 5.4E-39 T 12-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 PA257_5684 f4af64d574cf9f2693157b374e46d323 166 Pfam PF11072 Protein of unknown function (DUF2859) 26 163 1.1E-42 T 12-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 PA257_4177 1440e71d334cc287f17fffc6e3228eb5 344 Pfam PF04909 Amidohydrolase 32 334 1.2E-11 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PA257_4177 1440e71d334cc287f17fffc6e3228eb5 344 SUPERFAMILY SSF51556 32 334 1.53E-23 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_4177 1440e71d334cc287f17fffc6e3228eb5 344 Gene3D G3DSA:3.20.20.140 31 336 1.9E-31 T 12-10-2018 PA257_0841 808061b58de0b6b1035bd0d56932bf94 88 Gene3D G3DSA:2.40.50.140 4 87 2.3E-37 T 12-10-2018 PA257_0841 808061b58de0b6b1035bd0d56932bf94 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 2.0E-35 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0841 808061b58de0b6b1035bd0d56932bf94 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 83 25.574 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0841 808061b58de0b6b1035bd0d56932bf94 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 1.7E-37 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0841 808061b58de0b6b1035bd0d56932bf94 88 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 2.1E-13 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0841 808061b58de0b6b1035bd0d56932bf94 88 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 2.1E-13 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0841 808061b58de0b6b1035bd0d56932bf94 88 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 2.1E-13 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0841 808061b58de0b6b1035bd0d56932bf94 88 SUPERFAMILY SSF50249 9 85 3.47E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_0841 808061b58de0b6b1035bd0d56932bf94 88 Pfam PF00366 Ribosomal protein S17 13 79 8.8E-34 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_1355 a8afbd032277a9587e7dfab3f481d1bd 128 Pfam PF01592 NifU-like N terminal domain 2 125 3.5E-58 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 PA257_1355 a8afbd032277a9587e7dfab3f481d1bd 128 Gene3D G3DSA:3.90.1010.10 1 128 2.7E-60 T 12-10-2018 PA257_1355 a8afbd032277a9587e7dfab3f481d1bd 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.5E-69 T 12-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 PA257_1355 a8afbd032277a9587e7dfab3f481d1bd 128 SUPERFAMILY SSF82649 1 125 3.66E-49 T 12-10-2018 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 134 467 3.1E-111 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 133 243 1.9E-20 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 SUPERFAMILY SSF55347 293 456 2.38E-55 T 12-10-2018 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 287 305 1.1E-18 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 370 387 1.1E-18 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 412 427 1.1E-18 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 251 264 1.1E-18 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 314 330 1.1E-18 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 Gene3D G3DSA:3.30.360.10 292 457 9.9E-115 T 12-10-2018 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 291 298 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 SUPERFAMILY SSF51735 133 309 7.76E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 SMART SM00846 132 293 5.1E-53 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 298 455 1.1E-47 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PA257_2302 5bbe759ce685c6a321a391b3096a98bd 482 Gene3D G3DSA:3.40.50.720 134 468 9.9E-115 T 12-10-2018 PA257_0864 4e0b3c4cba94b9845bea5485647b2885 476 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 108 460 6.7E-122 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 PA257_0864 4e0b3c4cba94b9845bea5485647b2885 476 Gene3D G3DSA:3.60.120.10 10 463 2.5E-101 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_0864 4e0b3c4cba94b9845bea5485647b2885 476 SUPERFAMILY SSF56322 33 460 9.03E-101 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_0864 4e0b3c4cba94b9845bea5485647b2885 476 Pfam PF00425 chorismate binding enzyme 200 452 2.0E-73 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PA257_6870 33dd3a22a212644c7bbd4cc26b7c5bf3 204 SUPERFAMILY SSF75620 3 196 8.11E-43 T 12-10-2018 PA257_6870 33dd3a22a212644c7bbd4cc26b7c5bf3 204 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 2 201 3.9E-97 T 12-10-2018 IPR017509 Putative peptide chain release factor H PA257_6870 33dd3a22a212644c7bbd4cc26b7c5bf3 204 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 115 131 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PA257_6870 33dd3a22a212644c7bbd4cc26b7c5bf3 204 Pfam PF00472 RF-1 domain 107 191 1.4E-22 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PA257_6870 33dd3a22a212644c7bbd4cc26b7c5bf3 204 Gene3D G3DSA:3.30.160.20 103 187 8.9E-26 T 12-10-2018 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 331 1.5E-136 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 PIRSF PIRSF001415 3 336 2.3E-149 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 Gene3D G3DSA:3.20.20.70 1 337 1.9E-153 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 SUPERFAMILY SSF51569 8 334 4.54E-141 T 12-10-2018 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.5E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.5E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.5E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.5E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.5E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.5E-56 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PA257_6597 27bc69e242d58c65006826ba0f00904c 337 SMART SM01004 10 333 3.6E-240 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PA257_5236 4ceca3f1c560218d906762a19258c458 105 SMART SM00966 8 53 3.8E-9 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 PA257_5236 4ceca3f1c560218d906762a19258c458 105 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 9 48 5.4E-9 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 PA257_5236 4ceca3f1c560218d906762a19258c458 105 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 8 68 3.0E-7 T 12-10-2018 PA257_5236 4ceca3f1c560218d906762a19258c458 105 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 8 101 3.9E-15 T 12-10-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 PA257_5236 4ceca3f1c560218d906762a19258c458 105 SUPERFAMILY SSF89447 3 49 1.55E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily PA257_5236 4ceca3f1c560218d906762a19258c458 105 Gene3D G3DSA:2.10.260.10 2 46 5.9E-12 T 12-10-2018 PA257_4406 fadb29ae8a7d1c38c74fbcb26fc4657c 404 Gene3D G3DSA:3.90.550.10 35 281 2.7E-56 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4406 fadb29ae8a7d1c38c74fbcb26fc4657c 404 SUPERFAMILY SSF53448 52 280 1.88E-54 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4406 fadb29ae8a7d1c38c74fbcb26fc4657c 404 Pfam PF00535 Glycosyl transferase family 2 60 164 8.6E-30 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_4416 d83d385f36ab4757df79bcd8a413aa17 321 SMART SM00342 216 299 4.4E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4416 d83d385f36ab4757df79bcd8a413aa17 321 Pfam PF06719 AraC-type transcriptional regulator N-terminus 38 187 1.7E-39 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal PA257_4416 d83d385f36ab4757df79bcd8a413aa17 321 SUPERFAMILY SSF46689 201 249 2.69E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4416 d83d385f36ab4757df79bcd8a413aa17 321 SUPERFAMILY SSF46689 253 303 2.69E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4416 d83d385f36ab4757df79bcd8a413aa17 321 Gene3D G3DSA:1.10.10.60 197 304 4.2E-25 T 12-10-2018 PA257_4416 d83d385f36ab4757df79bcd8a413aa17 321 Pfam PF12833 Helix-turn-helix domain 222 297 1.5E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0448 678d785582477452b3abc2b15daf26cc 465 Gene3D G3DSA:3.30.830.10 258 454 1.0E-55 T 12-10-2018 PA257_0448 678d785582477452b3abc2b15daf26cc 465 Pfam PF05193 Peptidase M16 inactive domain 204 387 3.5E-28 T 12-10-2018 IPR007863 Peptidase M16, C-terminal PA257_0448 678d785582477452b3abc2b15daf26cc 465 Pfam PF00675 Insulinase (Peptidase family M16) 50 188 7.3E-21 T 12-10-2018 IPR011765 Peptidase M16, N-terminal PA257_0448 678d785582477452b3abc2b15daf26cc 465 SUPERFAMILY SSF63411 37 254 8.17E-61 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PA257_0448 678d785582477452b3abc2b15daf26cc 465 SUPERFAMILY SSF63411 264 459 3.83E-34 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PA257_0448 678d785582477452b3abc2b15daf26cc 465 Gene3D G3DSA:3.30.830.10 33 257 3.4E-92 T 12-10-2018 PA257_3021 08d11d006abfb9490479dfd0de0ea3c4 464 Pfam PF00691 OmpA family 363 457 5.1E-9 T 12-10-2018 IPR006665 OmpA-like domain PA257_3021 08d11d006abfb9490479dfd0de0ea3c4 464 Pfam PF12849 PBP superfamily domain 104 313 4.0E-26 T 12-10-2018 IPR024370 PBP domain PA257_3021 08d11d006abfb9490479dfd0de0ea3c4 464 SUPERFAMILY SSF53850 51 374 4.94E-60 T 12-10-2018 PA257_3021 08d11d006abfb9490479dfd0de0ea3c4 464 SUPERFAMILY SSF103088 340 463 3.27E-20 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_3021 08d11d006abfb9490479dfd0de0ea3c4 464 Gene3D G3DSA:3.30.1330.60 336 464 5.6E-18 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_3021 08d11d006abfb9490479dfd0de0ea3c4 464 Gene3D G3DSA:3.40.190.10 103 327 4.3E-54 T 12-10-2018 PA257_3021 08d11d006abfb9490479dfd0de0ea3c4 464 Gene3D G3DSA:3.40.190.10 160 291 4.3E-54 T 12-10-2018 PA257_1724 c48fa0712195a8bef5bec5551a1082cf 137 Gene3D G3DSA:1.10.3730.20 40 127 3.4E-9 T 12-10-2018 PA257_1724 c48fa0712195a8bef5bec5551a1082cf 137 SUPERFAMILY SSF103481 37 122 1.31E-11 T 12-10-2018 PA257_1724 c48fa0712195a8bef5bec5551a1082cf 137 Pfam PF00893 Small Multidrug Resistance protein 44 112 1.2E-6 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 PA257_1724 c48fa0712195a8bef5bec5551a1082cf 137 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 5 125 20.855 T 12-10-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF PA257_4635 93cbbfc2387d81fcbdd27bc22c2e4f05 198 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 18 192 2.4E-76 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal PA257_4635 93cbbfc2387d81fcbdd27bc22c2e4f05 198 Gene3D G3DSA:1.10.3820.10 19 195 1.0E-35 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily PA257_4635 93cbbfc2387d81fcbdd27bc22c2e4f05 198 SUPERFAMILY SSF48695 15 198 5.85E-67 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily PA257_4635 93cbbfc2387d81fcbdd27bc22c2e4f05 198 PIRSF PIRSF000013 1 198 6.4E-109 T 12-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 PA257_4635 93cbbfc2387d81fcbdd27bc22c2e4f05 198 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 8 193 8.8E-104 T 12-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 PA257_0418 e98f60e8e31e99025f42b5b99111d4cd 461 Pfam PF11067 Protein of unknown function (DUF2868) 148 444 8.6E-89 T 12-10-2018 IPR021296 Protein of unknown function DUF2868 PA257_2489 02a76c47c9db83d9d3ad2d14c3463b27 403 SUPERFAMILY SSF53383 6 401 3.36E-95 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_2489 02a76c47c9db83d9d3ad2d14c3463b27 403 Pfam PF00155 Aminotransferase class I and II 35 385 5.2E-48 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_2489 02a76c47c9db83d9d3ad2d14c3463b27 403 Gene3D G3DSA:3.90.1150.10 20 397 9.8E-143 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_2489 02a76c47c9db83d9d3ad2d14c3463b27 403 Gene3D G3DSA:3.40.640.10 52 293 9.8E-143 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_4517 5916de0f970728f78572bf3a8f2fc527 245 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 245 49.342 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 PA257_4517 5916de0f970728f78572bf3a8f2fc527 245 Pfam PF02654 Cobalamin-5-phosphate synthase 11 241 3.5E-52 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 PA257_4517 5916de0f970728f78572bf3a8f2fc527 245 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 7 243 1.2E-40 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 PA257_2848 b0c2e3dd99eca6b60bacf7fdaf160bb2 529 SUPERFAMILY SSF103473 15 399 1.7E-49 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_2848 b0c2e3dd99eca6b60bacf7fdaf160bb2 529 Gene3D G3DSA:1.20.1250.20 10 399 1.5E-38 T 12-10-2018 PA257_2848 b0c2e3dd99eca6b60bacf7fdaf160bb2 529 Pfam PF05977 Transmembrane secretion effector 6 523 4.7E-220 T 12-10-2018 IPR010290 Transmembrane secretion effector PA257_5306 eb1e66b5c8de0f3f64596cc8b22e696e 568 Pfam PF16930 Putative porin 32 568 1.3E-225 T 12-10-2018 IPR032638 Putative bacterial porin PA257_5306 eb1e66b5c8de0f3f64596cc8b22e696e 568 Gene3D G3DSA:2.40.160.20 193 361 1.2E-6 T 12-10-2018 PA257_5306 eb1e66b5c8de0f3f64596cc8b22e696e 568 SUPERFAMILY SSF56935 128 568 3.48E-12 T 12-10-2018 PA257_2967 3490480969accbd125edebeea80c4d1f 268 SUPERFAMILY SSF46894 189 257 2.01E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_2967 3490480969accbd125edebeea80c4d1f 268 SMART SM00421 199 256 2.7E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2967 3490480969accbd125edebeea80c4d1f 268 Gene3D G3DSA:1.10.10.10 157 263 3.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2967 3490480969accbd125edebeea80c4d1f 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 216 2.0E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2967 3490480969accbd125edebeea80c4d1f 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 232 244 2.0E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2967 3490480969accbd125edebeea80c4d1f 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 232 2.0E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2967 3490480969accbd125edebeea80c4d1f 268 Pfam PF00196 Bacterial regulatory proteins, luxR family 201 253 7.7E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_2967 3490480969accbd125edebeea80c4d1f 268 ProSitePatterns PS00622 LuxR-type HTH domain signature. 216 243 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_0999 c339ba717572370ce902c646fe4bd531 369 PIRSF PIRSF016624 1 369 9.5E-76 T 12-10-2018 IPR012106 Protease, Mu phage/prophage I type PA257_0999 c339ba717572370ce902c646fe4bd531 369 Pfam PF10123 Mu-like prophage I protein 31 364 3.0E-104 T 12-10-2018 IPR012106 Protease, Mu phage/prophage I type PA257_2807 2fae860ee3c6072969059c1ae09686d7 118 Pfam PF13411 MerR HTH family regulatory protein 19 87 1.0E-22 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2807 2fae860ee3c6072969059c1ae09686d7 118 SMART SM00422 19 89 5.3E-9 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_2807 2fae860ee3c6072969059c1ae09686d7 118 SUPERFAMILY SSF46955 17 111 3.02E-20 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_2807 2fae860ee3c6072969059c1ae09686d7 118 Gene3D G3DSA:1.10.1660.10 14 118 9.8E-22 T 12-10-2018 PA257_2669 a32f8f98ff7d1f7198a5e53e482826ad 87 Pfam PF14357 Domain of unknown function (DUF4404) 7 87 4.0E-27 T 12-10-2018 IPR025516 Protein of unknown function DUF4404 PA257_5389 3f480d2857afb1849dd80c82a45f86bf 140 Pfam PF13511 Domain of unknown function (DUF4124) 8 57 8.6E-15 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 PA257_3539 07811f868fa8e6f7f5da6f3dd27bc0ac 353 Gene3D G3DSA:3.90.1760.10 42 186 7.5E-43 T 12-10-2018 IPR037017 Anthrax toxin, edema factor, central domain superfamily GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 PA257_3539 07811f868fa8e6f7f5da6f3dd27bc0ac 353 SUPERFAMILY SSF81298 1 353 2.75E-139 T 12-10-2018 IPR035099 Anthrax toxin, edema factor, C-terminal KEGG: 00230+4.6.1.1 PA257_3539 07811f868fa8e6f7f5da6f3dd27bc0ac 353 Pfam PF03497 Anthrax toxin LF subunit 15 178 3.6E-66 T 12-10-2018 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 PA257_2265 30227dbeb8149616708dcfad53fc4ed7 198 SUPERFAMILY SSF47616 71 194 1.64E-21 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_2265 30227dbeb8149616708dcfad53fc4ed7 198 Gene3D G3DSA:3.40.30.10 1 87 6.3E-21 T 12-10-2018 PA257_2265 30227dbeb8149616708dcfad53fc4ed7 198 Pfam PF02798 Glutathione S-transferase, N-terminal domain 8 74 6.3E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_2265 30227dbeb8149616708dcfad53fc4ed7 198 Gene3D G3DSA:1.20.1050.10 88 193 4.3E-27 T 12-10-2018 PA257_2265 30227dbeb8149616708dcfad53fc4ed7 198 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 190 1.1E-7 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_2265 30227dbeb8149616708dcfad53fc4ed7 198 SUPERFAMILY SSF52833 1 83 7.63E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2065 4c41bf983e8dc9617c02dfbcf9f0b87d 309 SUPERFAMILY SSF53850 92 293 3.98E-27 T 12-10-2018 PA257_2065 4c41bf983e8dc9617c02dfbcf9f0b87d 309 SUPERFAMILY SSF46785 5 87 1.03E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2065 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Pfam PF03466 LysR substrate binding domain 92 290 1.1E-25 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_2065 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2065 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Gene3D G3DSA:1.10.10.10 1 87 7.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2065 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Gene3D G3DSA:3.40.190.290 97 292 7.4E-17 T 12-10-2018 PA257_1203 c66535535e1005efa870161cf3f674c3 167 Pfam PF01936 NYN domain 11 159 5.0E-35 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type PA257_1203 c66535535e1005efa870161cf3f674c3 167 Gene3D G3DSA:3.40.50.1010 4 165 5.7E-49 T 12-10-2018 PA257_1091 9379aded6bb83aec8898dea210f09bbd 152 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 46 128 4.6E-5 T 12-10-2018 IPR039366 YscW/ExsB PA257_1270 764e0030648caee1074bd08a4e43b6a4 731 Pfam PF04632 Fusaric acid resistance protein family 30 714 9.5E-216 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 PA257_2018 7ce95685ade5cbb40c301623aeb2384b 624 Pfam PF01553 Acyltransferase 443 570 1.5E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_2018 7ce95685ade5cbb40c301623aeb2384b 624 SMART SM00563 457 573 3.5E-28 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PA257_2018 7ce95685ade5cbb40c301623aeb2384b 624 SUPERFAMILY SSF69593 385 573 2.62E-28 T 12-10-2018 PA257_2018 7ce95685ade5cbb40c301623aeb2384b 624 Gene3D G3DSA:1.20.1250.20 11 421 1.3E-25 T 12-10-2018 PA257_2018 7ce95685ade5cbb40c301623aeb2384b 624 Pfam PF07690 Major Facilitator Superfamily 19 387 8.6E-17 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_2018 7ce95685ade5cbb40c301623aeb2384b 624 SUPERFAMILY SSF103473 12 426 2.49E-26 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4680 ff857fa5973642fd6776c61138f78efa 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 110 1.3E-13 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_4680 ff857fa5973642fd6776c61138f78efa 135 SUPERFAMILY SSF54593 1 123 3.89E-33 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4680 ff857fa5973642fd6776c61138f78efa 135 Gene3D G3DSA:3.10.180.10 1 135 1.6E-43 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_5603 eabea2c0dee8d167c385f92aa9b86966 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 189 2.0E-52 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 PA257_5603 eabea2c0dee8d167c385f92aa9b86966 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 4 198 26.74 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 PA257_5603 eabea2c0dee8d167c385f92aa9b86966 203 SUPERFAMILY SSF52540 4 196 2.15E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5603 eabea2c0dee8d167c385f92aa9b86966 203 Gene3D G3DSA:3.40.50.300 1 200 2.3E-66 T 12-10-2018 PA257_5603 eabea2c0dee8d167c385f92aa9b86966 203 Pfam PF01121 Dephospho-CoA kinase 5 181 1.7E-68 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 PA257_6287 e77438762a81accb147cff276f1df965 399 Pfam PF04932 O-Antigen ligase 262 323 1.1E-6 T 12-10-2018 IPR007016 O-antigen ligase-related PA257_1863 1708a79d9b3fbc3f8d5e00b09935ad55 328 Gene3D G3DSA:2.60.120.1440 101 242 6.7E-19 T 12-10-2018 PA257_1863 1708a79d9b3fbc3f8d5e00b09935ad55 328 Gene3D G3DSA:3.55.50.30 255 328 1.6E-7 T 12-10-2018 PA257_1863 1708a79d9b3fbc3f8d5e00b09935ad55 328 Pfam PF04773 FecR protein 115 210 5.8E-16 T 12-10-2018 IPR006860 FecR protein PA257_1863 1708a79d9b3fbc3f8d5e00b09935ad55 328 Pfam PF16220 Domain of unknown function (DUF4880) 12 53 6.7E-10 T 12-10-2018 IPR032623 FecR, N-terminal PA257_1863 1708a79d9b3fbc3f8d5e00b09935ad55 328 PIRSF PIRSF018266 2 327 5.6E-80 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_2844 b7904277f0329ded0a7a2e6925da178e 339 SMART SM00342 256 338 4.0E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2844 b7904277f0329ded0a7a2e6925da178e 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 213 5.0E-44 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_2844 b7904277f0329ded0a7a2e6925da178e 339 Gene3D G3DSA:1.10.10.60 236 339 2.3E-25 T 12-10-2018 PA257_2844 b7904277f0329ded0a7a2e6925da178e 339 SUPERFAMILY SSF46689 291 338 2.9E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2844 b7904277f0329ded0a7a2e6925da178e 339 Pfam PF12833 Helix-turn-helix domain 262 339 2.7E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_0894 1a805774afda2e1d68ee284eef85cb77 351 Pfam PF03060 Nitronate monooxygenase 5 348 8.2E-81 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PA257_0894 1a805774afda2e1d68ee284eef85cb77 351 Gene3D G3DSA:3.20.20.70 1 351 7.8E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0894 1a805774afda2e1d68ee284eef85cb77 351 SUPERFAMILY SSF51412 4 349 1.13E-61 T 12-10-2018 PA257_0657 cee956fe6fec56d09849cca8568badc2 392 SUPERFAMILY SSF51004 26 390 3.53E-75 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily PA257_0657 cee956fe6fec56d09849cca8568badc2 392 Pfam PF02239 Cytochrome D1 heme domain 25 386 2.9E-147 T 12-10-2018 PA257_0657 cee956fe6fec56d09849cca8568badc2 392 Gene3D G3DSA:2.140.10.20 19 390 7.6E-53 T 12-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily PA257_1524 76fa3ddb33517a56549782d01c98fc13 431 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 21 412 3.9E-131 T 12-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA PA257_1524 76fa3ddb33517a56549782d01c98fc13 431 Pfam PF08014 Domain of unknown function (DUF1704) 42 416 3.1E-133 T 12-10-2018 IPR012548 Protein of unknown function DUF1704 PA257_1524 76fa3ddb33517a56549782d01c98fc13 431 SMART SM01154 41 419 8.4E-183 T 12-10-2018 IPR012548 Protein of unknown function DUF1704 PA257_1753 62b7e4add30efee3d1f783f2f85cd2e7 73 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 49 1.1E-11 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain PA257_1753 62b7e4add30efee3d1f783f2f85cd2e7 73 Gene3D G3DSA:1.10.10.1100 1 57 2.8E-25 T 12-10-2018 PA257_2835 c17656194e426017e7d3998077a84e71 287 SUPERFAMILY SSF103481 194 285 9.68E-13 T 12-10-2018 PA257_2835 c17656194e426017e7d3998077a84e71 287 SUPERFAMILY SSF103481 44 143 1.1E-9 T 12-10-2018 PA257_2835 c17656194e426017e7d3998077a84e71 287 Pfam PF00892 EamA-like transporter family 14 140 8.8E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_2835 c17656194e426017e7d3998077a84e71 287 Pfam PF00892 EamA-like transporter family 153 283 3.8E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_6864 02b1780ddc0efb94f153f8303b8f606e 652 Pfam PF13387 Domain of unknown function (DUF4105) 271 441 7.2E-31 T 12-10-2018 IPR025178 Domain of unknown function DUF4105 PA257_6316 a5d469f3b8b6f92dee2c4b17c771ce66 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PA257_6316 a5d469f3b8b6f92dee2c4b17c771ce66 425 Gene3D G3DSA:3.40.640.10 1 285 2.4E-106 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_6316 a5d469f3b8b6f92dee2c4b17c771ce66 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 421 2.3E-207 T 12-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 PA257_6316 a5d469f3b8b6f92dee2c4b17c771ce66 425 SUPERFAMILY SSF53383 1 421 6.18E-134 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_6316 a5d469f3b8b6f92dee2c4b17c771ce66 425 PIRSF PIRSF001434 1 424 2.4E-135 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PA257_6316 a5d469f3b8b6f92dee2c4b17c771ce66 425 Gene3D G3DSA:3.90.1150.10 289 425 1.1E-52 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_6316 a5d469f3b8b6f92dee2c4b17c771ce66 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 9.6E-144 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PA257_3173 6438d8e4a09660ce4f60fccba38ac029 211 Gene3D G3DSA:1.10.10.10 90 164 2.2E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0528 6438d8e4a09660ce4f60fccba38ac029 211 Gene3D G3DSA:1.10.10.10 90 164 2.2E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3741 162594c6474fa0e7d8a81cbfb6e48a76 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.6E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3741 162594c6474fa0e7d8a81cbfb6e48a76 306 Pfam PF03466 LysR substrate binding domain 91 289 6.1E-43 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3741 162594c6474fa0e7d8a81cbfb6e48a76 306 SUPERFAMILY SSF46785 1 84 1.18E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_3741 162594c6474fa0e7d8a81cbfb6e48a76 306 Gene3D G3DSA:3.40.190.290 91 293 3.0E-49 T 12-10-2018 PA257_3741 162594c6474fa0e7d8a81cbfb6e48a76 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3741 162594c6474fa0e7d8a81cbfb6e48a76 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3741 162594c6474fa0e7d8a81cbfb6e48a76 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3741 162594c6474fa0e7d8a81cbfb6e48a76 306 SUPERFAMILY SSF53850 91 290 3.86E-41 T 12-10-2018 PA257_3741 162594c6474fa0e7d8a81cbfb6e48a76 306 Gene3D G3DSA:1.10.10.10 1 84 1.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0380 ad5d7fd42800ac50e021de43494997d6 164 Pfam PF04463 Protein of unknown function (DUF523) 4 149 1.3E-39 T 12-10-2018 IPR007553 Domain of unknown function DUF523 PA257_3000 d2261cce23e9229230dfbea6eb1da618 395 Gene3D G3DSA:3.50.50.60 4 328 8.1E-87 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3000 d2261cce23e9229230dfbea6eb1da618 395 SUPERFAMILY SSF51905 2 149 3.51E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3000 d2261cce23e9229230dfbea6eb1da618 395 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 137 1.2E-7 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_3000 d2261cce23e9229230dfbea6eb1da618 395 Gene3D G3DSA:3.50.50.60 115 270 8.1E-87 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3000 d2261cce23e9229230dfbea6eb1da618 395 SUPERFAMILY SSF51905 119 261 1.11E-22 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1413 dc238f727206166801115c9e4458d8be 83 Pfam PF05284 Protein of unknown function (DUF736) 3 42 1.5E-10 T 12-10-2018 IPR007948 Protein of unknown function DUF736 PA257_0279 14d7232927cbd3ec65295de1256a16dd 213 Pfam PF05076 Suppressor of fused protein (SUFU) 49 196 5.3E-21 T 12-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 PA257_0279 14d7232927cbd3ec65295de1256a16dd 213 SUPERFAMILY SSF103359 47 201 1.31E-5 T 12-10-2018 IPR037181 Suppressor of fused, N-terminal Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 PA257_4666 2962d75b7830b1ccd30e5c34b2a1d722 217 Gene3D G3DSA:3.40.50.1000 3 214 1.1E-71 T 12-10-2018 IPR023214 HAD superfamily PA257_4666 2962d75b7830b1ccd30e5c34b2a1d722 217 SUPERFAMILY SSF56784 2 205 2.24E-29 T 12-10-2018 IPR036412 HAD-like superfamily PA257_4666 2962d75b7830b1ccd30e5c34b2a1d722 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 190 3.4E-41 T 12-10-2018 PA257_4666 2962d75b7830b1ccd30e5c34b2a1d722 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 201 5.8E-51 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like PA257_4666 2962d75b7830b1ccd30e5c34b2a1d722 217 Gene3D G3DSA:1.20.1440.100 15 88 1.1E-71 T 12-10-2018 PA257_4666 2962d75b7830b1ccd30e5c34b2a1d722 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 1.4E-35 T 12-10-2018 PA257_5724 17931654e7624ff2b8e14ab64ebd977a 365 SUPERFAMILY SSF54373 220 307 7.46E-21 T 12-10-2018 PA257_5724 17931654e7624ff2b8e14ab64ebd977a 365 SUPERFAMILY SSF51905 5 361 8.42E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5724 17931654e7624ff2b8e14ab64ebd977a 365 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 6 350 3.4E-81 T 12-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 PA257_5724 17931654e7624ff2b8e14ab64ebd977a 365 Gene3D G3DSA:3.50.50.60 7 347 1.4E-93 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5724 17931654e7624ff2b8e14ab64ebd977a 365 Pfam PF01266 FAD dependent oxidoreductase 5 346 4.0E-70 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_5724 17931654e7624ff2b8e14ab64ebd977a 365 Gene3D G3DSA:3.30.9.10 91 306 1.4E-93 T 12-10-2018 PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 170 188 4.0E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 92 110 4.0E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 204 218 4.0E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 137 155 4.0E-29 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 Gene3D G3DSA:1.10.8.60 276 369 2.4E-16 T 12-10-2018 PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 Gene3D G3DSA:3.40.50.300 28 274 1.5E-56 T 12-10-2018 PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 279 347 8.1E-18 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 SUPERFAMILY SSF52540 47 346 7.02E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 SMART SM00382 88 237 3.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 SMART SM01086 276 368 4.3E-17 T 12-10-2018 IPR019489 Clp ATPase, C-terminal PA257_1909 beaae0a61326d92c0ac0258ff3bc106c 371 Pfam PF07724 AAA domain (Cdc48 subfamily) 87 269 2.0E-39 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_5729 6bdbe93712f766458f8e9cd153a4d0cf 201 Pfam PF14341 PilX N-terminal 10 60 1.1E-8 T 12-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain PA257_1086 4e37f5edcbc97594c50ff9897d1fc60b 234 SMART SM00382 30 226 2.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1086 4e37f5edcbc97594c50ff9897d1fc60b 234 Gene3D G3DSA:3.40.50.300 1 229 9.8E-54 T 12-10-2018 PA257_1086 4e37f5edcbc97594c50ff9897d1fc60b 234 Pfam PF00005 ABC transporter 24 178 2.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_1086 4e37f5edcbc97594c50ff9897d1fc60b 234 SUPERFAMILY SSF52540 4 224 4.65E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1642 52b0227d1caeb8661b820102b4d66411 98 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 17 92 9.3E-15 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative PA257_4129 d614349d393754799024dcab30124907 398 TIGRFAM TIGR00843 benE: benzoate transporter 18 393 6.8E-129 T 12-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PA257_4129 d614349d393754799024dcab30124907 398 Pfam PF03594 Benzoate membrane transport protein 16 392 4.8E-168 T 12-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PA257_1584 9c609c5ee078836afc904ffc096c6562 542 SUPERFAMILY SSF52317 287 538 2.22E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_1584 9c609c5ee078836afc904ffc096c6562 542 Pfam PF06418 CTP synthase N-terminus 3 265 9.8E-125 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PA257_1584 9c609c5ee078836afc904ffc096c6562 542 Gene3D G3DSA:3.40.50.300 1 284 2.1E-130 T 12-10-2018 PA257_1584 9c609c5ee078836afc904ffc096c6562 542 Pfam PF00117 Glutamine amidotransferase class-I 300 533 9.3E-59 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_1584 9c609c5ee078836afc904ffc096c6562 542 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.562 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PA257_1584 9c609c5ee078836afc904ffc096c6562 542 Gene3D G3DSA:3.40.50.880 285 542 1.2E-104 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_1584 9c609c5ee078836afc904ffc096c6562 542 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 5.5E-253 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PA257_1584 9c609c5ee078836afc904ffc096c6562 542 SUPERFAMILY SSF52540 1 267 1.52E-121 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0529 066c304319aeaf1dc50f1d71cfd19236 250 Gene3D G3DSA:3.40.50.300 20 170 6.3E-9 T 12-10-2018 PA257_0529 066c304319aeaf1dc50f1d71cfd19236 250 Pfam PF13401 AAA domain 38 147 1.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_0529 066c304319aeaf1dc50f1d71cfd19236 250 SUPERFAMILY SSF52540 33 232 8.79E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3174 066c304319aeaf1dc50f1d71cfd19236 250 Gene3D G3DSA:3.40.50.300 20 170 6.3E-9 T 12-10-2018 PA257_3174 066c304319aeaf1dc50f1d71cfd19236 250 Pfam PF13401 AAA domain 38 147 1.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_3174 066c304319aeaf1dc50f1d71cfd19236 250 SUPERFAMILY SSF52540 33 232 8.79E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3138 e1a94526e698ab957edf9b7545a30400 138 Pfam PF07030 Protein of unknown function (DUF1320) 3 127 1.8E-30 T 12-10-2018 IPR009752 Bacteriophage Mu, Gp36 PA257_0492 e1a94526e698ab957edf9b7545a30400 138 Pfam PF07030 Protein of unknown function (DUF1320) 3 127 1.8E-30 T 12-10-2018 IPR009752 Bacteriophage Mu, Gp36 PA257_6388 752f549014124b8ad8016c967e14dbf7 467 Pfam PF00324 Amino acid permease 15 446 2.4E-102 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_6388 752f549014124b8ad8016c967e14dbf7 467 Gene3D G3DSA:1.20.1740.10 7 458 7.1E-66 T 12-10-2018 PA257_6388 752f549014124b8ad8016c967e14dbf7 467 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PA257_6388 752f549014124b8ad8016c967e14dbf7 467 PIRSF PIRSF006060 1 459 2.8E-70 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_2321 dbd1ae8ba85b261002113ed3b38f7e1e 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 187 7.4E-35 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel PA257_3062 86590bb891f63361d905949bc28225c7 290 Gene3D G3DSA:1.10.10.10 1 92 1.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3062 86590bb891f63361d905949bc28225c7 290 SUPERFAMILY SSF53850 86 285 1.49E-32 T 12-10-2018 PA257_3062 86590bb891f63361d905949bc28225c7 290 Gene3D G3DSA:3.40.190.10 94 284 3.2E-64 T 12-10-2018 PA257_3062 86590bb891f63361d905949bc28225c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3062 86590bb891f63361d905949bc28225c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3062 86590bb891f63361d905949bc28225c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3062 86590bb891f63361d905949bc28225c7 290 Pfam PF03466 LysR substrate binding domain 86 287 2.0E-35 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3062 86590bb891f63361d905949bc28225c7 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.1E-23 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3062 86590bb891f63361d905949bc28225c7 290 Gene3D G3DSA:3.40.190.10 161 264 3.2E-64 T 12-10-2018 PA257_3062 86590bb891f63361d905949bc28225c7 290 SUPERFAMILY SSF46785 1 86 2.64E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0591 53abed55d4245c486e69b8e870c5ff84 243 SMART SM00062 21 243 6.7E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_0591 53abed55d4245c486e69b8e870c5ff84 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 241 1.6E-22 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_0591 53abed55d4245c486e69b8e870c5ff84 243 Gene3D G3DSA:3.40.190.10 28 240 3.1E-28 T 12-10-2018 PA257_0591 53abed55d4245c486e69b8e870c5ff84 243 SUPERFAMILY SSF53850 22 240 3.82E-39 T 12-10-2018 PA257_0591 53abed55d4245c486e69b8e870c5ff84 243 Gene3D G3DSA:3.40.190.10 103 202 3.1E-28 T 12-10-2018 PA257_1452 f431e81530cf50f5761f7dd57ceee266 194 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 9 189 1.1E-80 T 12-10-2018 IPR018715 Protein of unknown function DUF2239 PA257_4359 fb5fed13ee20cf46e79df6cf5462d1a4 237 SUPERFAMILY SSF54001 71 137 4.76E-7 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_4359 fb5fed13ee20cf46e79df6cf5462d1a4 237 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 74 181 1.6E-17 T 12-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted PA257_4359 fb5fed13ee20cf46e79df6cf5462d1a4 237 Gene3D G3DSA:3.10.620.30 35 231 1.3E-80 T 12-10-2018 PA257_1471 3b2e3244b27a94faf6b6e3fd2f7d0ec5 266 Pfam PF01578 Cytochrome C assembly protein 38 263 2.6E-41 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PA257_5928 faa177adffb208e3343f803b328be996 411 Gene3D G3DSA:3.40.640.10 70 293 1.2E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_5928 faa177adffb208e3343f803b328be996 411 SUPERFAMILY SSF53383 10 394 1.88E-106 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_5928 faa177adffb208e3343f803b328be996 411 Pfam PF00155 Aminotransferase class I and II 37 386 4.9E-59 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_5928 faa177adffb208e3343f803b328be996 411 Gene3D G3DSA:3.90.1150.10 294 391 1.2E-135 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_4414 323a14db0000c0f887ddae4b89f02a5e 669 Pfam PF00263 Bacterial type II and III secretion system protein 462 636 2.2E-44 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 PA257_4414 323a14db0000c0f887ddae4b89f02a5e 669 PRINTS PR00811 Bacterial general secretion pathway protein D signature 601 619 8.6E-13 T 12-10-2018 IPR001775 GspD/PilQ family PA257_4414 323a14db0000c0f887ddae4b89f02a5e 669 PRINTS PR00811 Bacterial general secretion pathway protein D signature 458 482 8.6E-13 T 12-10-2018 IPR001775 GspD/PilQ family PA257_4414 323a14db0000c0f887ddae4b89f02a5e 669 PRINTS PR00811 Bacterial general secretion pathway protein D signature 624 638 8.6E-13 T 12-10-2018 IPR001775 GspD/PilQ family PA257_4414 323a14db0000c0f887ddae4b89f02a5e 669 PRINTS PR00811 Bacterial general secretion pathway protein D signature 400 410 8.6E-13 T 12-10-2018 IPR001775 GspD/PilQ family PA257_4414 323a14db0000c0f887ddae4b89f02a5e 669 Gene3D G3DSA:3.30.1370.120 274 401 2.8E-6 T 12-10-2018 IPR038591 NolW-like superfamily PA257_4414 323a14db0000c0f887ddae4b89f02a5e 669 Gene3D G3DSA:3.30.1370.120 11 178 2.8E-10 T 12-10-2018 IPR038591 NolW-like superfamily PA257_4414 323a14db0000c0f887ddae4b89f02a5e 669 Pfam PF03958 Bacterial type II/III secretion system short domain 275 400 7.4E-10 T 12-10-2018 IPR005644 NolW-like PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Pfam PF01839 FG-GAP repeat 189 230 9.6E-5 T 12-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 SUPERFAMILY SSF51120 2099 2287 8.11E-11 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 413 489 1.0E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 986 1061 2.7E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 1233 1308 4.5E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 741 816 4.6E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 1725 1802 1.1E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 1643 1718 1.3E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 1315 1390 9.5E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 823 897 3.9E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 905 981 4.3E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 1561 1636 2.5E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 1397 1472 6.8E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 164 244 4.7E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 1479 1555 2.0E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 331 407 1.4E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 577 651 5.3E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 495 571 2.9E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 1069 1145 4.3E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 1151 1227 1.2E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 247 325 1.5E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_3875 8430a8b406e1cf1c0c04108b46cb5849 2296 Gene3D G3DSA:2.60.40.10 659 735 5.8E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_6172 15854bec62b105c9c1a3f600f0488ae8 190 Pfam PF04955 HupE / UreJ protein 11 187 7.7E-61 T 12-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PA257_6172 15854bec62b105c9c1a3f600f0488ae8 190 PIRSF PIRSF016919 1 190 8.3E-64 T 12-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PA257_3227 47a11dc569ed7092d2fc5e67dc6d6a45 469 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 273 310 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_3227 47a11dc569ed7092d2fc5e67dc6d6a45 469 Pfam PF00202 Aminotransferase class-III 49 463 9.9E-89 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_3227 47a11dc569ed7092d2fc5e67dc6d6a45 469 PIRSF PIRSF000521 33 154 3.5E-4 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_3227 47a11dc569ed7092d2fc5e67dc6d6a45 469 PIRSF PIRSF000521 141 466 1.7E-29 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_3227 47a11dc569ed7092d2fc5e67dc6d6a45 469 Gene3D G3DSA:3.40.640.10 85 354 6.1E-137 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_3227 47a11dc569ed7092d2fc5e67dc6d6a45 469 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 32 467 1.9E-174 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 PA257_3227 47a11dc569ed7092d2fc5e67dc6d6a45 469 SUPERFAMILY SSF53383 39 463 1.73E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_3227 47a11dc569ed7092d2fc5e67dc6d6a45 469 Gene3D G3DSA:3.90.1150.10 36 456 6.1E-137 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_1508 a57421e3323b35fc0da7299ada1a635a 620 Pfam PF13450 NAD(P)-binding Rossmann-like domain 78 137 8.8E-13 T 12-10-2018 PA257_1508 a57421e3323b35fc0da7299ada1a635a 620 SUPERFAMILY SSF51905 67 441 8.3E-24 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1508 a57421e3323b35fc0da7299ada1a635a 620 Gene3D G3DSA:3.50.50.60 74 166 1.8E-10 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6120 e37b0634594d6c9489be1abcfe859da9 657 SMART SM00283 395 656 3.1E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_6120 e37b0634594d6c9489be1abcfe859da9 657 SUPERFAMILY SSF58104 358 657 1.7E-66 T 12-10-2018 PA257_6120 e37b0634594d6c9489be1abcfe859da9 657 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 423 452 2.3E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_6120 e37b0634594d6c9489be1abcfe859da9 657 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 2.3E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_6120 e37b0634594d6c9489be1abcfe859da9 657 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 469 622 3.4E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_6120 e37b0634594d6c9489be1abcfe859da9 657 Gene3D G3DSA:1.10.287.950 327 657 3.3E-67 T 12-10-2018 PA257_1060 66812ffd3252299ba6c88af12544bb49 274 Pfam PF17409 MoaF C-terminal domain 158 270 7.6E-50 T 12-10-2018 IPR035348 MoaF, C-terminal domain PA257_1060 66812ffd3252299ba6c88af12544bb49 274 Pfam PF10703 MoaF N-terminal domain 8 116 6.4E-34 T 12-10-2018 IPR024724 Molybdenum cofactor biosynthesis protein F, N-terminal PA257_5572 84b74afa657060338b1bf85ffb92a08a 483 Pfam PF03573 outer membrane porin, OprD family 61 481 5.7E-123 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_5572 84b74afa657060338b1bf85ffb92a08a 483 Gene3D G3DSA:2.40.160.10 25 483 1.3E-185 T 12-10-2018 IPR023614 Porin domain superfamily PA257_3867 507b335de04ca5c3e6bf9b1010eecac4 107 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.4E-29 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 PA257_3867 507b335de04ca5c3e6bf9b1010eecac4 107 Gene3D G3DSA:1.10.3730.20 1 106 9.5E-34 T 12-10-2018 PA257_3867 507b335de04ca5c3e6bf9b1010eecac4 107 SUPERFAMILY SSF103481 4 104 2.48E-22 T 12-10-2018 PA257_3782 44bde488957edfcac77e48403aca145c 222 Gene3D G3DSA:2.40.50.140 1 68 2.7E-14 T 12-10-2018 PA257_3782 44bde488957edfcac77e48403aca145c 222 Pfam PF06961 Protein of unknown function (DUF1294) 135 189 1.8E-23 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 PA257_3782 44bde488957edfcac77e48403aca145c 222 SUPERFAMILY SSF50249 5 60 5.14E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_3782 44bde488957edfcac77e48403aca145c 222 Pfam PF00313 'Cold-shock' DNA-binding domain 5 55 4.8E-9 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PA257_3782 44bde488957edfcac77e48403aca145c 222 ProSitePatterns PS00352 'Cold-shock' domain signature. 11 30 - T 12-10-2018 IPR019844 Cold-shock conserved site PA257_6035 d52063a33b1fa5a43bd1d12cd7e8539c 189 Pfam PF05069 Phage virion morphogenesis family 11 181 1.6E-29 T 12-10-2018 IPR006522 Phage virion morphogensis protein PA257_6035 d52063a33b1fa5a43bd1d12cd7e8539c 189 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 11 121 5.0E-13 T 12-10-2018 IPR006522 Phage virion morphogensis protein PA257_5169 5e7f9927c6b6c769b81fe4653381bc06 213 Pfam PF13460 NAD(P)H-binding 7 198 4.2E-35 T 12-10-2018 IPR016040 NAD(P)-binding domain PA257_5169 5e7f9927c6b6c769b81fe4653381bc06 213 SUPERFAMILY SSF51735 1 211 3.85E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5169 5e7f9927c6b6c769b81fe4653381bc06 213 Gene3D G3DSA:3.40.50.720 2 213 7.3E-60 T 12-10-2018 PA257_4180 07e202b974d5d8009d780c7c55f48f5a 163 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 55 2.9E-6 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_4180 07e202b974d5d8009d780c7c55f48f5a 163 SUPERFAMILY SSF47741 86 155 1.1E-29 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily PA257_4180 07e202b974d5d8009d780c7c55f48f5a 163 Gene3D G3DSA:1.10.150.120 77 163 7.6E-29 T 12-10-2018 PA257_4180 07e202b974d5d8009d780c7c55f48f5a 163 SUPERFAMILY SSF54292 6 90 7.08E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_4180 07e202b974d5d8009d780c7c55f48f5a 163 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PA257_4180 07e202b974d5d8009d780c7c55f48f5a 163 Pfam PF01799 [2Fe-2S] binding domain 75 147 2.8E-27 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PA257_4180 07e202b974d5d8009d780c7c55f48f5a 163 Gene3D G3DSA:3.10.20.30 2 76 2.8E-27 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_2533 af6f813d497e433d784047467db74fe5 262 PRINTS PR00406 Cytochrome B5 reductase signature 118 137 2.5E-6 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_2533 af6f813d497e433d784047467db74fe5 262 PRINTS PR00406 Cytochrome B5 reductase signature 58 65 2.5E-6 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_2533 af6f813d497e433d784047467db74fe5 262 PRINTS PR00406 Cytochrome B5 reductase signature 94 108 2.5E-6 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PA257_2533 af6f813d497e433d784047467db74fe5 262 Gene3D G3DSA:2.40.30.10 9 108 1.3E-21 T 12-10-2018 PA257_2533 af6f813d497e433d784047467db74fe5 262 SUPERFAMILY SSF63380 9 109 1.28E-21 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PA257_2533 af6f813d497e433d784047467db74fe5 262 Pfam PF00970 Oxidoreductase FAD-binding domain 15 104 5.8E-10 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PA257_2533 af6f813d497e433d784047467db74fe5 262 SUPERFAMILY SSF52343 97 257 1.31E-27 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_2533 af6f813d497e433d784047467db74fe5 262 Pfam PF00175 Oxidoreductase NAD-binding domain 119 241 1.7E-13 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PA257_2533 af6f813d497e433d784047467db74fe5 262 Gene3D G3DSA:3.40.50.80 114 261 9.0E-27 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PA257_3678 cb3e0a50d561a201988e7adc6245fc7d 471 SUPERFAMILY SSF103473 9 462 1.18E-64 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3678 cb3e0a50d561a201988e7adc6245fc7d 471 Gene3D G3DSA:1.20.1250.20 259 467 9.1E-20 T 12-10-2018 PA257_3678 cb3e0a50d561a201988e7adc6245fc7d 471 Gene3D G3DSA:1.20.1720.10 11 242 6.1E-46 T 12-10-2018 PA257_3678 cb3e0a50d561a201988e7adc6245fc7d 471 Pfam PF07690 Major Facilitator Superfamily 15 409 8.4E-54 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0119 1fa4aff2f1cd37be937240057de52e2c 370 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 20 318 1.2E-93 T 12-10-2018 IPR018683 Domain of unknown function DUF2169 PA257_2253 e5442117c9c1700bb6b15fab40186e85 114 Pfam PF04320 Protein with unknown function (DUF469) 7 105 3.3E-36 T 12-10-2018 IPR007416 Protein of unknown function DUF469 PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 475 489 5.7E-5 T 12-10-2018 PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 511 527 5.7E-5 T 12-10-2018 PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 SUPERFAMILY SSF52317 437 624 1.12E-22 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 511 522 2.8E-9 T 12-10-2018 PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 478 487 2.8E-9 T 12-10-2018 PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 597 610 2.8E-9 T 12-10-2018 PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 Pfam PF00425 chorismate binding enzyme 122 381 1.7E-47 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 Gene3D G3DSA:3.40.50.880 436 625 2.6E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 Pfam PF00117 Glutamine amidotransferase class-I 439 618 1.6E-25 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 SUPERFAMILY SSF56322 66 390 3.53E-67 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 PRINTS PR00097 Anthranilate synthase component II signature 511 522 3.6E-8 T 12-10-2018 PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 PRINTS PR00097 Anthranilate synthase component II signature 597 610 3.6E-8 T 12-10-2018 PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 PRINTS PR00097 Anthranilate synthase component II signature 437 451 3.6E-8 T 12-10-2018 PA257_3844 6a830db49f02c0842e94f888ae16ff12 627 Gene3D G3DSA:3.60.120.10 2 391 5.1E-135 T 12-10-2018 IPR005801 ADC synthase GO:0009058 PA257_1689 48386c3e23a1bf5201842ff275325fab 293 Pfam PF00561 alpha/beta hydrolase fold 14 264 2.9E-18 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_1689 48386c3e23a1bf5201842ff275325fab 293 SUPERFAMILY SSF53474 1 282 5.36E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1689 48386c3e23a1bf5201842ff275325fab 293 Gene3D G3DSA:3.40.50.1820 1 283 3.7E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0498 105ea06fd706c04f785adb2c9654d9c8 298 Pfam PF10123 Mu-like prophage I protein 2 267 5.0E-82 T 12-10-2018 IPR012106 Protease, Mu phage/prophage I type PA257_0498 105ea06fd706c04f785adb2c9654d9c8 298 PIRSF PIRSF016624 1 271 3.7E-57 T 12-10-2018 IPR012106 Protease, Mu phage/prophage I type PA257_1108 6b217a10f7fda159a50473a7c2a6e6d4 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 48 3.0E-11 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PA257_1108 6b217a10f7fda159a50473a7c2a6e6d4 80 SUPERFAMILY SSF116842 3 68 4.18E-21 T 12-10-2018 PA257_1108 6b217a10f7fda159a50473a7c2a6e6d4 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 16.08 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PA257_1108 6b217a10f7fda159a50473a7c2a6e6d4 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 63 7.4E-22 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PA257_1108 6b217a10f7fda159a50473a7c2a6e6d4 80 Gene3D G3DSA:1.10.287.1040 2 79 1.3E-23 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 PA257_1108 6b217a10f7fda159a50473a7c2a6e6d4 80 PIRSF PIRSF006488 1 80 2.1E-22 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PA257_1108 6b217a10f7fda159a50473a7c2a6e6d4 80 Pfam PF02609 Exonuclease VII small subunit 9 60 4.8E-20 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PA257_3764 17f2e2afb9d34bd880258c71a9e51b00 287 SUPERFAMILY SSF103481 182 278 8.89E-9 T 12-10-2018 PA257_3764 17f2e2afb9d34bd880258c71a9e51b00 287 SUPERFAMILY SSF103481 42 139 2.75E-8 T 12-10-2018 PA257_3764 17f2e2afb9d34bd880258c71a9e51b00 287 Pfam PF00892 EamA-like transporter family 7 135 3.6E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_3764 17f2e2afb9d34bd880258c71a9e51b00 287 Pfam PF00892 EamA-like transporter family 146 275 5.2E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_0096 fdfa4acfd0c6928b633e2e38f831e5c4 226 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 5 139 1.3E-47 T 12-10-2018 IPR017748 T6S-associated protein TagF PA257_0096 fdfa4acfd0c6928b633e2e38f831e5c4 226 Gene3D G3DSA:3.40.1730.10 1 226 4.9E-94 T 12-10-2018 IPR038225 T6S-associated protein TagF superfamily PA257_0096 fdfa4acfd0c6928b633e2e38f831e5c4 226 PIRSF PIRSF029287 1 219 9.1E-99 T 12-10-2018 IPR017748 T6S-associated protein TagF PA257_0096 fdfa4acfd0c6928b633e2e38f831e5c4 226 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 5 139 5.9E-49 T 12-10-2018 IPR017748 T6S-associated protein TagF PA257_6153 faab9f432fdf1dff14e78eae25ed06b7 179 Pfam PF03473 MOSC domain 56 164 4.8E-6 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PA257_6153 faab9f432fdf1dff14e78eae25ed06b7 179 Gene3D G3DSA:2.40.33.20 1 178 2.7E-33 T 12-10-2018 PA257_6153 faab9f432fdf1dff14e78eae25ed06b7 179 SUPERFAMILY SSF50800 2 169 1.41E-41 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PA257_4172 98c8393825506dc495d9f23416708f3c 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 4.6E-98 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_4172 98c8393825506dc495d9f23416708f3c 171 Pfam PF07977 FabA-like domain 28 158 1.3E-52 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_4172 98c8393825506dc495d9f23416708f3c 171 Gene3D G3DSA:3.10.129.10 1 171 3.0E-74 T 12-10-2018 PA257_4172 98c8393825506dc495d9f23416708f3c 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 51.643 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PA257_4172 98c8393825506dc495d9f23416708f3c 171 SUPERFAMILY SSF54637 2 168 4.97E-58 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_0147 3a49395301bc83c4db96dab2a678da88 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 87 3.7E-8 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PA257_0147 3a49395301bc83c4db96dab2a678da88 93 Gene3D G3DSA:3.30.2310.20 1 90 1.3E-11 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PA257_1403 cc9567b7a90ca3756f37f283609e2da9 418 Pfam PF00589 Phage integrase family 214 375 1.2E-19 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_1403 cc9567b7a90ca3756f37f283609e2da9 418 SUPERFAMILY SSF56349 98 385 2.59E-57 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_1403 cc9567b7a90ca3756f37f283609e2da9 418 Gene3D G3DSA:1.10.150.130 90 196 1.4E-19 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_1403 cc9567b7a90ca3756f37f283609e2da9 418 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 98 147 1.2E-7 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PA257_1403 cc9567b7a90ca3756f37f283609e2da9 418 Gene3D G3DSA:1.10.443.10 208 386 5.3E-19 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_1403 cc9567b7a90ca3756f37f283609e2da9 418 Pfam PF13356 Arm DNA-binding domain 2 89 2.2E-16 T 12-10-2018 IPR025166 Integrase, DNA-binding domain PA257_1403 cc9567b7a90ca3756f37f283609e2da9 418 Gene3D G3DSA:3.30.160.390 1 89 1.0E-23 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily PA257_5436 cd039ce804cc0c8c2310e681b46a0084 473 PIRSF PIRSF028099 3 473 2.6E-190 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase PA257_5436 cd039ce804cc0c8c2310e681b46a0084 473 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 36 473 3.1E-140 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase PA257_5436 cd039ce804cc0c8c2310e681b46a0084 473 SUPERFAMILY SSF46626 330 473 3.58E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5436 cd039ce804cc0c8c2310e681b46a0084 473 Gene3D G3DSA:1.10.760.10 331 473 6.5E-9 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4916 1aa1bf708f6474278116b7b568f76092 642 Gene3D G3DSA:3.40.720.10 246 540 1.9E-50 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_4916 1aa1bf708f6474278116b7b568f76092 642 SUPERFAMILY SSF53649 251 580 8.77E-56 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_4916 1aa1bf708f6474278116b7b568f76092 642 Pfam PF00884 Sulfatase 256 534 3.1E-29 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PA257_4916 1aa1bf708f6474278116b7b568f76092 642 Pfam PF11893 Domain of unknown function (DUF3413) 76 247 1.2E-18 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal PA257_4916 1aa1bf708f6474278116b7b568f76092 642 PIRSF PIRSF004950 1 625 7.1E-207 T 12-10-2018 IPR012159 Inner membrane protein YejM PA257_2451 1286839fcf7a5e766e889fa65c6e5610 182 SUPERFAMILY SSF55144 7 173 2.27E-39 T 12-10-2018 IPR009097 Cyclic phosphodiesterase PA257_2451 1286839fcf7a5e766e889fa65c6e5610 182 Pfam PF13563 2'-5' RNA ligase superfamily 15 156 1.3E-10 T 12-10-2018 PA257_2451 1286839fcf7a5e766e889fa65c6e5610 182 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 7 171 2.4E-29 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 PA257_2451 1286839fcf7a5e766e889fa65c6e5610 182 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 6 171 18.705 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 PA257_2451 1286839fcf7a5e766e889fa65c6e5610 182 Gene3D G3DSA:3.90.1140.10 3 172 1.7E-42 T 12-10-2018 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 417 505 1.7E-13 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 Gene3D G3DSA:1.10.8.870 412 523 4.1E-21 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 Pfam PF01266 FAD dependent oxidoreductase 23 345 1.6E-48 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 Gene3D G3DSA:3.30.9.10 104 341 5.9E-112 T 12-10-2018 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 334 340 2.0E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 63 2.0E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 96 108 2.0E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 365 377 2.0E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 45 2.0E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 34 2.0E-22 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 SUPERFAMILY SSF51905 22 345 6.15E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2277 9430fd8385b19e6385007d1d86c18e89 526 Gene3D G3DSA:3.50.50.60 20 377 5.9E-112 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4042 96dd6c7fb68306a157c3b737dd5f382c 266 SMART SM00460 153 215 6.1E-16 T 12-10-2018 IPR002931 Transglutaminase-like PA257_4042 96dd6c7fb68306a157c3b737dd5f382c 266 Pfam PF01841 Transglutaminase-like superfamily 111 212 1.0E-21 T 12-10-2018 IPR002931 Transglutaminase-like PA257_4042 96dd6c7fb68306a157c3b737dd5f382c 266 SUPERFAMILY SSF54001 51 258 9.81E-48 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_4042 96dd6c7fb68306a157c3b737dd5f382c 266 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 1.8E-19 T 12-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal PA257_4042 96dd6c7fb68306a157c3b737dd5f382c 266 Gene3D G3DSA:3.10.620.30 71 244 6.5E-46 T 12-10-2018 PA257_4392 55da9826a9d9388670bd4f5076cd1add 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4392 55da9826a9d9388670bd4f5076cd1add 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4392 55da9826a9d9388670bd4f5076cd1add 210 Gene3D G3DSA:1.10.357.10 21 210 4.7E-80 T 12-10-2018 PA257_4392 55da9826a9d9388670bd4f5076cd1add 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 4.2E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_4392 55da9826a9d9388670bd4f5076cd1add 210 SUPERFAMILY SSF46689 16 90 9.71E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5950 063d4c163e08336f3cac47799ec312cd 73 Pfam PF11006 Protein of unknown function (DUF2845) 1 70 2.9E-17 T 12-10-2018 IPR021268 Protein of unknown function DUF2845 PA257_5360 49378014f65e4ece68400cf75bc0e444 245 PIRSF PIRSF029658 1 245 5.3E-75 T 12-10-2018 IPR016931 Uncharacterised conserved protein UCP029658, TPR PA257_5360 49378014f65e4ece68400cf75bc0e444 245 Gene3D G3DSA:1.25.40.10 35 211 6.2E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5360 49378014f65e4ece68400cf75bc0e444 245 SUPERFAMILY SSF48452 53 203 1.18E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5554 b71cc716924269ce5e2b4e4127763985 125 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 34 124 4.7E-43 T 12-10-2018 IPR012997 Rare lipoprotein A PA257_5554 b71cc716924269ce5e2b4e4127763985 125 Pfam PF03330 Lytic transglycolase 33 121 1.7E-28 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain PA257_5554 b71cc716924269ce5e2b4e4127763985 125 SUPERFAMILY SSF50685 30 121 1.88E-13 T 12-10-2018 IPR036908 RlpA-like domain superfamily PA257_5554 b71cc716924269ce5e2b4e4127763985 125 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 5 124 23.732 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 PA257_5554 b71cc716924269ce5e2b4e4127763985 125 Gene3D G3DSA:2.40.40.10 31 125 3.4E-40 T 12-10-2018 IPR036908 RlpA-like domain superfamily PA257_6471 db410a9a1a34f49324763f950b582f0c 268 Pfam PF11860 N-acetylmuramidase 89 260 7.5E-66 T 12-10-2018 IPR024408 N-acetylmuramidase PA257_6471 db410a9a1a34f49324763f950b582f0c 268 Pfam PF01471 Putative peptidoglycan binding domain 9 64 1.0E-16 T 12-10-2018 IPR002477 Peptidoglycan binding-like PA257_6471 db410a9a1a34f49324763f950b582f0c 268 SUPERFAMILY SSF47090 2 64 2.38E-20 T 12-10-2018 IPR036365 PGBD-like superfamily PA257_6471 db410a9a1a34f49324763f950b582f0c 268 Gene3D G3DSA:1.10.101.10 1 67 1.3E-22 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PA257_2432 72d22c5317040bac53b6247212dd00e1 189 Gene3D G3DSA:1.20.58.320 11 89 4.2E-24 T 12-10-2018 PA257_2432 72d22c5317040bac53b6247212dd00e1 189 Pfam PF06041 Bacterial protein of unknown function (DUF924) 21 186 3.9E-49 T 12-10-2018 IPR010323 Protein of unknown function DUF924 PA257_2432 72d22c5317040bac53b6247212dd00e1 189 Gene3D G3DSA:1.25.40.10 90 189 4.2E-35 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2432 72d22c5317040bac53b6247212dd00e1 189 SUPERFAMILY SSF48452 15 185 4.17E-59 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 SUPERFAMILY SSF49354 20 141 2.88E-39 T 12-10-2018 IPR008962 PapD-like superfamily PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 PRINTS PR00969 Pili chaperone signature 123 138 1.5E-25 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 PRINTS PR00969 Pili chaperone signature 162 177 1.5E-25 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 PRINTS PR00969 Pili chaperone signature 26 35 1.5E-25 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 PRINTS PR00969 Pili chaperone signature 72 93 1.5E-25 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 PRINTS PR00969 Pili chaperone signature 100 117 1.5E-25 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 229 1.3E-17 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 Gene3D G3DSA:2.60.40.10 25 142 5.9E-38 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 SUPERFAMILY SSF49584 135 232 1.28E-16 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 141 6.7E-40 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PA257_4833 7aaf90a3e9283e4ba93fed0347f534e8 237 Gene3D G3DSA:2.60.40.10 145 237 2.6E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_5438 5045e6441d95c22e832fd23442f4d576 364 SUPERFAMILY SSF50969 52 345 2.94E-21 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PA257_5438 5045e6441d95c22e832fd23442f4d576 364 Gene3D G3DSA:2.130.10.10 59 248 3.5E-6 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_5438 5045e6441d95c22e832fd23442f4d576 364 Pfam PF07433 Protein of unknown function (DUF1513) 60 363 8.3E-113 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 PA257_5438 5045e6441d95c22e832fd23442f4d576 364 PIRSF PIRSF028101 1 364 8.0E-158 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 PA257_2826 4b9833dc4fae7e087e519580f319a248 311 Pfam PF16220 Domain of unknown function (DUF4880) 9 51 7.1E-14 T 12-10-2018 IPR032623 FecR, N-terminal PA257_2826 4b9833dc4fae7e087e519580f319a248 311 PIRSF PIRSF018266 2 310 2.2E-85 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_2826 4b9833dc4fae7e087e519580f319a248 311 Gene3D G3DSA:2.60.120.1440 99 229 3.1E-17 T 12-10-2018 PA257_2826 4b9833dc4fae7e087e519580f319a248 311 Pfam PF04773 FecR protein 108 196 7.1E-17 T 12-10-2018 IPR006860 FecR protein PA257_4785 5bea338b0b8865b0c64ebeeca5032ff6 206 Pfam PF03458 UPF0126 domain 5 79 6.1E-20 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 PA257_4785 5bea338b0b8865b0c64ebeeca5032ff6 206 Pfam PF03458 UPF0126 domain 91 163 1.2E-21 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 PA257_1707 53c71997256cd993f41becbc30245582 392 SUPERFAMILY SSF103473 3 385 4.19E-58 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1707 53c71997256cd993f41becbc30245582 392 Gene3D G3DSA:1.20.1720.10 5 384 2.0E-108 T 12-10-2018 PA257_1707 53c71997256cd993f41becbc30245582 392 Pfam PF07690 Major Facilitator Superfamily 15 348 9.1E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1707 53c71997256cd993f41becbc30245582 392 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 380 1.4E-89 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 PA257_5904 2afdc47e3ac5616a06a5e098e3a4b0d2 338 PIRSF PIRSF000116 2 203 6.4E-45 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PA257_5904 2afdc47e3ac5616a06a5e098e3a4b0d2 338 PIRSF PIRSF000116 201 332 1.0E-14 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PA257_5904 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.862 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PA257_5904 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 3.4E-75 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PA257_5904 2afdc47e3ac5616a06a5e098e3a4b0d2 338 SUPERFAMILY SSF48179 183 332 1.55E-69 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_5904 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Gene3D G3DSA:3.40.50.720 1 182 1.9E-78 T 12-10-2018 PA257_5904 2afdc47e3ac5616a06a5e098e3a4b0d2 338 SUPERFAMILY SSF51735 1 182 6.95E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5904 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Gene3D G3DSA:1.10.3730.40 183 338 2.7E-75 T 12-10-2018 PA257_5904 2afdc47e3ac5616a06a5e098e3a4b0d2 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 2.3E-130 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PA257_5904 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 4.3E-63 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PA257_1504 24bd9f9005bb8ab50b2ebd3b9d0ae307 113 Gene3D G3DSA:3.10.50.40 1 112 5.3E-41 T 12-10-2018 PA257_1504 24bd9f9005bb8ab50b2ebd3b9d0ae307 113 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 17 106 3.1E-32 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PA257_1504 24bd9f9005bb8ab50b2ebd3b9d0ae307 113 SUPERFAMILY SSF54534 2 108 6.48E-40 T 12-10-2018 PA257_3745 33fea516beb1b69fcfbcf013d4eb6d8d 187 SUPERFAMILY SSF159275 5 187 5.1E-57 T 12-10-2018 PA257_3745 33fea516beb1b69fcfbcf013d4eb6d8d 187 Pfam PF06475 Putative glycolipid-binding 17 186 6.4E-55 T 12-10-2018 IPR009467 Putative glycolipid-binding protein PA257_5123 18abf97813205ff63ffe2d0a5a7671e4 212 SUPERFAMILY SSF52218 1 210 2.1E-48 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_5123 18abf97813205ff63ffe2d0a5a7671e4 212 Pfam PF02525 Flavodoxin-like fold 3 207 1.3E-43 T 12-10-2018 IPR003680 Flavodoxin-like fold PA257_5123 18abf97813205ff63ffe2d0a5a7671e4 212 Gene3D G3DSA:3.40.50.360 1 212 1.3E-64 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_5123 18abf97813205ff63ffe2d0a5a7671e4 212 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 209 29.224 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 PA257_1359 0d83393a0151cdca5df4206f9281d85d 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.2E-58 T 12-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 PA257_1359 0d83393a0151cdca5df4206f9281d85d 112 SUPERFAMILY SSF54292 4 106 1.39E-34 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_1359 0d83393a0151cdca5df4206f9281d85d 112 PRINTS PR00355 Adrenodoxin signature 42 52 7.6E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PA257_1359 0d83393a0151cdca5df4206f9281d85d 112 PRINTS PR00355 Adrenodoxin signature 60 74 7.6E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PA257_1359 0d83393a0151cdca5df4206f9281d85d 112 PRINTS PR00355 Adrenodoxin signature 83 91 7.6E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PA257_1359 0d83393a0151cdca5df4206f9281d85d 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 12-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PA257_1359 0d83393a0151cdca5df4206f9281d85d 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 5.4E-17 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_1359 0d83393a0151cdca5df4206f9281d85d 112 Gene3D G3DSA:3.10.20.30 1 111 2.1E-36 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_0918 e35445cb27bde5b2ebb8bc056aaf4961 462 SUPERFAMILY SSF50494 222 459 2.71E-34 T 12-10-2018 IPR009003 Peptidase S1, PA clan PA257_0918 e35445cb27bde5b2ebb8bc056aaf4961 462 Gene3D G3DSA:2.40.10.10 246 349 4.8E-46 T 12-10-2018 PA257_0918 e35445cb27bde5b2ebb8bc056aaf4961 462 Gene3D G3DSA:2.40.10.10 221 449 4.8E-46 T 12-10-2018 PA257_5518 e8ce8d0217dc95389f1892fc4e4ae7ca 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 3.9E-119 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 PA257_5518 e8ce8d0217dc95389f1892fc4e4ae7ca 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 5.2E-178 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5518 e8ce8d0217dc95389f1892fc4e4ae7ca 421 SUPERFAMILY SSF55205 1 419 2.78E-142 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PA257_5518 e8ce8d0217dc95389f1892fc4e4ae7ca 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 45.313 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PA257_5518 e8ce8d0217dc95389f1892fc4e4ae7ca 421 Gene3D G3DSA:3.65.10.10 21 231 2.8E-178 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PA257_5518 e8ce8d0217dc95389f1892fc4e4ae7ca 421 Gene3D G3DSA:3.65.10.10 6 416 2.8E-178 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PA257_6406 6c66abc2c8af483754b78d8a7b6f95b9 194 Pfam PF13649 Methyltransferase domain 32 124 6.5E-12 T 12-10-2018 PA257_6406 6c66abc2c8af483754b78d8a7b6f95b9 194 Gene3D G3DSA:3.40.50.150 1 194 4.9E-47 T 12-10-2018 PA257_6406 6c66abc2c8af483754b78d8a7b6f95b9 194 SUPERFAMILY SSF53335 2 161 2.41E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_4028 2755af2505e318438ee9ca2f5c92e0a1 168 Pfam PF01661 Macro domain 28 137 4.0E-6 T 12-10-2018 IPR002589 Macro domain PA257_4028 2755af2505e318438ee9ca2f5c92e0a1 168 SUPERFAMILY SSF52949 1 155 3.36E-32 T 12-10-2018 PA257_4028 2755af2505e318438ee9ca2f5c92e0a1 168 Gene3D G3DSA:3.40.220.10 1 156 1.8E-25 T 12-10-2018 PA257_4028 2755af2505e318438ee9ca2f5c92e0a1 168 SMART SM00506 1 140 3.2E-5 T 12-10-2018 IPR002589 Macro domain PA257_2385 944634fcd3b84aae49989bf8cab20294 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 1.4E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PA257_2385 944634fcd3b84aae49989bf8cab20294 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 207 1.9E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_2385 944634fcd3b84aae49989bf8cab20294 237 Gene3D G3DSA:1.10.3720.10 9 229 3.3E-40 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2385 944634fcd3b84aae49989bf8cab20294 237 SUPERFAMILY SSF161098 17 217 4.19E-37 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2439 c0c672958b9ccf28e91fa3723fcfca0c 265 Pfam PF13622 Thioesterase-like superfamily 20 263 3.1E-52 T 12-10-2018 PA257_2439 c0c672958b9ccf28e91fa3723fcfca0c 265 SUPERFAMILY SSF54637 1 108 1.23E-25 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_2439 c0c672958b9ccf28e91fa3723fcfca0c 265 Gene3D G3DSA:3.10.129.90 4 264 2.9E-71 T 12-10-2018 PA257_2439 c0c672958b9ccf28e91fa3723fcfca0c 265 SUPERFAMILY SSF54637 123 263 2.4E-27 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6887 5f178c4ee5b8cedaa0741692f4ecddb9 197 Pfam PF01914 MarC family integral membrane protein 4 192 1.7E-42 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PA257_1078 85af4187815bdf312dd1c912b21bc64d 192 Pfam PF11354 Protein of unknown function (DUF3156) 31 189 1.7E-55 T 12-10-2018 IPR021500 Protein of unknown function DUF3156 PA257_4711 5f2b6cd3d3504aaa2bd349cbf5ab7187 268 Pfam PF02108 Flagellar assembly protein FliH 112 234 5.6E-34 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PA257_4711 5f2b6cd3d3504aaa2bd349cbf5ab7187 268 SUPERFAMILY SSF160527 141 240 1.11E-7 T 12-10-2018 PA257_1788 6ddb749ed148fefdad374cff3a595247 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 2.4E-51 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 PA257_1788 6ddb749ed148fefdad374cff3a595247 188 Pfam PF00692 dUTPase 76 184 9.1E-9 T 12-10-2018 IPR029054 dUTPase-like PA257_1788 6ddb749ed148fefdad374cff3a595247 188 Gene3D G3DSA:2.70.40.10 1 159 2.5E-54 T 12-10-2018 IPR036157 dUTPase-like superfamily PA257_1788 6ddb749ed148fefdad374cff3a595247 188 SUPERFAMILY SSF51283 3 187 1.83E-53 T 12-10-2018 IPR036157 dUTPase-like superfamily PA257_1788 6ddb749ed148fefdad374cff3a595247 188 Hamap MF_00146 dCTP deaminase [dcd]. 1 188 28.976 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 PA257_4636 b71c8bd80bc97f308fb9c0a27deb819e 398 SUPERFAMILY SSF47090 324 393 3.14E-14 T 12-10-2018 IPR036365 PGBD-like superfamily PA257_4636 b71c8bd80bc97f308fb9c0a27deb819e 398 Pfam PF01471 Putative peptidoglycan binding domain 339 393 6.3E-11 T 12-10-2018 IPR002477 Peptidoglycan binding-like PA257_4636 b71c8bd80bc97f308fb9c0a27deb819e 398 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 25 319 1.3E-110 T 12-10-2018 IPR011970 Lytic murein transglycosylase PA257_4636 b71c8bd80bc97f308fb9c0a27deb819e 398 Gene3D G3DSA:1.10.530.10 67 315 1.1E-80 T 12-10-2018 PA257_4636 b71c8bd80bc97f308fb9c0a27deb819e 398 SUPERFAMILY SSF53955 10 322 1.63E-98 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_4636 b71c8bd80bc97f308fb9c0a27deb819e 398 Gene3D G3DSA:1.10.8.350 34 200 1.1E-80 T 12-10-2018 PA257_4636 b71c8bd80bc97f308fb9c0a27deb819e 398 Gene3D G3DSA:1.10.101.10 331 398 3.3E-10 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PA257_4636 b71c8bd80bc97f308fb9c0a27deb819e 398 Pfam PF13406 Transglycosylase SLT domain 25 316 6.5E-104 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 PA257_2123 3f93faa637cedce0fba13bbabe7f34a2 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 303 2.0E-46 T 12-10-2018 IPR000160 GGDEF domain PA257_2123 3f93faa637cedce0fba13bbabe7f34a2 307 SMART SM00267 136 307 3.8E-58 T 12-10-2018 IPR000160 GGDEF domain PA257_2123 3f93faa637cedce0fba13bbabe7f34a2 307 Gene3D G3DSA:3.30.70.270 143 307 4.1E-55 T 12-10-2018 PA257_2123 3f93faa637cedce0fba13bbabe7f34a2 307 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 305 7.1E-49 T 12-10-2018 IPR000160 GGDEF domain PA257_2123 3f93faa637cedce0fba13bbabe7f34a2 307 SUPERFAMILY SSF55073 152 305 1.18E-47 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_4501 ed37b5c0cd66ff00fcf55fd1382af57b 310 Gene3D G3DSA:3.40.50.720 19 302 7.9E-87 T 12-10-2018 PA257_4501 ed37b5c0cd66ff00fcf55fd1382af57b 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 275 2.8E-41 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PA257_4501 ed37b5c0cd66ff00fcf55fd1382af57b 310 Gene3D G3DSA:3.40.50.720 95 279 7.9E-87 T 12-10-2018 PA257_4501 ed37b5c0cd66ff00fcf55fd1382af57b 310 SUPERFAMILY SSF51735 97 275 1.89E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3927 c7f04675c200a332bf4c9b03279abbd6 236 Gene3D G3DSA:3.40.50.1240 2 228 5.3E-36 T 12-10-2018 IPR029033 Histidine phosphatase superfamily PA257_3927 c7f04675c200a332bf4c9b03279abbd6 236 SMART SM00855 3 179 6.1E-12 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PA257_3927 c7f04675c200a332bf4c9b03279abbd6 236 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 219 5.5E-23 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PA257_3927 c7f04675c200a332bf4c9b03279abbd6 236 SUPERFAMILY SSF53254 4 226 1.21E-38 T 12-10-2018 IPR029033 Histidine phosphatase superfamily PA257_0475 5720834efb8e6b1a5a6b3ed0246f3e9d 134 Pfam PF05154 TM2 domain 74 119 7.7E-15 T 12-10-2018 IPR007829 TM2 domain PA257_0475 5720834efb8e6b1a5a6b3ed0246f3e9d 134 Pfam PF05154 TM2 domain 8 54 5.1E-15 T 12-10-2018 IPR007829 TM2 domain PA257_1152 5480736588bf778ddb965ad6156ee14b 299 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 3 291 4.0E-119 T 12-10-2018 IPR011757 Lytic transglycosylase MltB PA257_1152 5480736588bf778ddb965ad6156ee14b 299 Gene3D G3DSA:1.10.8.350 6 174 5.6E-124 T 12-10-2018 PA257_1152 5480736588bf778ddb965ad6156ee14b 299 Pfam PF13406 Transglycosylase SLT domain 2 289 4.1E-101 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 PA257_1152 5480736588bf778ddb965ad6156ee14b 299 SUPERFAMILY SSF53955 3 293 1.05E-94 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_1152 5480736588bf778ddb965ad6156ee14b 299 Gene3D G3DSA:1.10.530.10 40 289 5.6E-124 T 12-10-2018 PA257_3521 52bae7afccf6f3c8f9652fafe18a8664 176 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 159 1.9E-16 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 PA257_3191 b563fdaabfc3232e99203f83a48edf4a 341 Pfam PF01145 SPFH domain / Band 7 family 55 240 6.7E-30 T 12-10-2018 IPR001107 Band 7 domain PA257_3191 b563fdaabfc3232e99203f83a48edf4a 341 Gene3D G3DSA:3.30.479.30 86 230 1.6E-9 T 12-10-2018 PA257_3191 b563fdaabfc3232e99203f83a48edf4a 341 SUPERFAMILY SSF117892 87 230 1.96E-13 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily PA257_3191 b563fdaabfc3232e99203f83a48edf4a 341 PIRSF PIRSF005651 29 333 6.8E-90 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 PA257_3191 b563fdaabfc3232e99203f83a48edf4a 341 SMART SM00244 51 225 3.4E-9 T 12-10-2018 IPR001107 Band 7 domain PA257_2983 0fcbbd76bbb5f1b75159072bc6beb324 196 SUPERFAMILY SSF52218 1 193 6.9E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_2983 0fcbbd76bbb5f1b75159072bc6beb324 196 Gene3D G3DSA:3.40.50.360 1 192 5.4E-56 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_2983 0fcbbd76bbb5f1b75159072bc6beb324 196 Pfam PF02525 Flavodoxin-like fold 2 188 2.7E-35 T 12-10-2018 IPR003680 Flavodoxin-like fold PA257_5933 725266cd61ab578ea8efafc7bac2f730 363 Gene3D G3DSA:3.40.1350.30 45 186 4.0E-129 T 12-10-2018 PA257_5933 725266cd61ab578ea8efafc7bac2f730 363 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 345 355 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site PA257_5933 725266cd61ab578ea8efafc7bac2f730 363 SUPERFAMILY SSF53335 10 362 1.47E-57 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5933 725266cd61ab578ea8efafc7bac2f730 363 Gene3D G3DSA:3.40.50.150 13 359 4.0E-129 T 12-10-2018 PA257_5933 725266cd61ab578ea8efafc7bac2f730 363 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 363 5.4E-178 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 PA257_5933 725266cd61ab578ea8efafc7bac2f730 363 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 363 3.7E-171 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PA257_5933 725266cd61ab578ea8efafc7bac2f730 363 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 296 325 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site PA257_5933 725266cd61ab578ea8efafc7bac2f730 363 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 363 41.264 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 PA257_4761 f42e6733d40e9be635fc4d377327e716 306 SUPERFAMILY SSF103481 195 296 9.68E-15 T 12-10-2018 PA257_4761 f42e6733d40e9be635fc4d377327e716 306 Pfam PF00892 EamA-like transporter family 14 144 4.7E-26 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_4761 f42e6733d40e9be635fc4d377327e716 306 Pfam PF00892 EamA-like transporter family 158 290 3.3E-25 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_4761 f42e6733d40e9be635fc4d377327e716 306 SUPERFAMILY SSF103481 47 147 1.12E-17 T 12-10-2018 PA257_6527 6ee94c3f13bceb4d1c9d5d12cb905be6 188 Pfam PF00293 NUDIX domain 48 164 1.5E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_6527 6ee94c3f13bceb4d1c9d5d12cb905be6 188 Gene3D G3DSA:3.90.79.10 5 187 7.3E-45 T 12-10-2018 PA257_6527 6ee94c3f13bceb4d1c9d5d12cb905be6 188 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PA257_6527 6ee94c3f13bceb4d1c9d5d12cb905be6 188 SUPERFAMILY SSF55811 5 178 3.38E-36 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_2105 4703f8fa8594be18e23f96de6cb65e7a 333 Gene3D G3DSA:3.30.420.40 16 321 2.4E-92 T 12-10-2018 PA257_2105 4703f8fa8594be18e23f96de6cb65e7a 333 Hamap MF_00524 Glucokinase [glk]. 14 328 32.132 T 12-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 PA257_2105 4703f8fa8594be18e23f96de6cb65e7a 333 TIGRFAM TIGR00749 glk: glucokinase 16 322 1.0E-75 T 12-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 PA257_2105 4703f8fa8594be18e23f96de6cb65e7a 333 SUPERFAMILY SSF53067 16 329 1.45E-52 T 12-10-2018 PA257_2105 4703f8fa8594be18e23f96de6cb65e7a 333 Pfam PF02685 Glucokinase 16 327 1.1E-105 T 12-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 PA257_2105 4703f8fa8594be18e23f96de6cb65e7a 333 Gene3D G3DSA:3.40.367.20 111 311 2.4E-92 T 12-10-2018 PA257_0353 3df2f6207d4c82364fd3be6fa16df26f 461 Gene3D G3DSA:1.20.1730.10 21 459 8.8E-75 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily PA257_0353 3df2f6207d4c82364fd3be6fa16df26f 461 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 395 415 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site PA257_0353 3df2f6207d4c82364fd3be6fa16df26f 461 Pfam PF00474 Sodium:solute symporter family 32 413 1.9E-34 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 PA257_2586 cf0814209b547b371a6bdf6e478e5ea6 81 Pfam PF11431 Membrane transport protein MerF 24 67 6.0E-26 T 12-10-2018 IPR021091 Mercury ion transport, MerF PA257_2586 cf0814209b547b371a6bdf6e478e5ea6 81 Gene3D G3DSA:1.20.58.2000 1 81 1.7E-44 T 12-10-2018 PA257_0746 1ebfc759e60116f826a4991321a33a43 224 Pfam PF00483 Nucleotidyl transferase 2 117 2.8E-15 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PA257_0746 1ebfc759e60116f826a4991321a33a43 224 Gene3D G3DSA:3.90.550.10 1 224 2.2E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_0746 1ebfc759e60116f826a4991321a33a43 224 SUPERFAMILY SSF53448 1 220 1.04E-56 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_2747 75cc62808791960fdf4ff13d8460b863 599 Gene3D G3DSA:3.40.390.10 2 196 3.4E-16 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 PA257_2747 75cc62808791960fdf4ff13d8460b863 599 Gene3D G3DSA:2.60.120.260 297 445 6.6E-11 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily PA257_2747 75cc62808791960fdf4ff13d8460b863 599 Gene3D G3DSA:2.60.120.260 456 599 6.1E-19 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily PA257_2747 75cc62808791960fdf4ff13d8460b863 599 SUPERFAMILY SSF49785 455 598 4.82E-24 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily PA257_2747 75cc62808791960fdf4ff13d8460b863 599 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 46 175 6.4E-25 T 12-10-2018 PA257_2747 75cc62808791960fdf4ff13d8460b863 599 SUPERFAMILY SSF55486 22 220 4.81E-20 T 12-10-2018 PA257_2747 75cc62808791960fdf4ff13d8460b863 599 Pfam PF02018 Carbohydrate binding domain 458 583 1.8E-9 T 12-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 PA257_2747 75cc62808791960fdf4ff13d8460b863 599 SUPERFAMILY SSF49785 306 440 5.95E-14 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily PA257_0416 c89522991f9bf1b6edb7147599976672 265 Gene3D G3DSA:3.40.50.150 16 185 3.5E-20 T 12-10-2018 PA257_0416 c89522991f9bf1b6edb7147599976672 265 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 27 164 2.2E-25 T 12-10-2018 IPR006342 Methyltransferase FkbM PA257_0416 c89522991f9bf1b6edb7147599976672 265 Pfam PF05050 Methyltransferase FkbM domain 29 176 8.4E-19 T 12-10-2018 IPR006342 Methyltransferase FkbM PA257_0416 c89522991f9bf1b6edb7147599976672 265 SUPERFAMILY SSF53335 17 191 3.32E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2655 8b750a2916d250a9303af3835c2c1064 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 178 4.9E-16 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_2655 8b750a2916d250a9303af3835c2c1064 197 SUPERFAMILY SSF88659 104 178 1.05E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_2655 8b750a2916d250a9303af3835c2c1064 197 SUPERFAMILY SSF88946 13 100 9.02E-5 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_2655 8b750a2916d250a9303af3835c2c1064 197 Pfam PF08281 Sigma-70, region 4 126 178 6.4E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_2655 8b750a2916d250a9303af3835c2c1064 197 Gene3D G3DSA:1.10.10.10 103 183 3.1E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1167 d6541582194c0a2ceade3731a3fbed45 253 Pfam PF02698 DUF218 domain 81 243 1.4E-26 T 12-10-2018 IPR003848 Domain of unknown function DUF218 PA257_3380 674ddbd4cae7dfb201bedc6123a5b8fe 238 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 57 211 3.6E-36 T 12-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 PA257_1873 a195eccf3e3de5067f81a29ccf4dc601 377 Gene3D G3DSA:3.40.1710.10 37 173 4.8E-6 T 12-10-2018 PA257_1873 a195eccf3e3de5067f81a29ccf4dc601 377 Pfam PF12698 ABC-2 family transporter protein 22 361 5.1E-28 T 12-10-2018 PA257_3683 1b0ac13ef1e4be3fa7150e76209d3ca6 166 Gene3D G3DSA:1.10.1740.10 6 74 3.2E-6 T 12-10-2018 PA257_3683 1b0ac13ef1e4be3fa7150e76209d3ca6 166 Gene3D G3DSA:1.10.10.10 89 166 2.6E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3683 1b0ac13ef1e4be3fa7150e76209d3ca6 166 Pfam PF08281 Sigma-70, region 4 108 160 5.4E-11 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_3683 1b0ac13ef1e4be3fa7150e76209d3ca6 166 SUPERFAMILY SSF88659 88 164 1.4E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_3683 1b0ac13ef1e4be3fa7150e76209d3ca6 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 161 5.3E-16 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_3683 1b0ac13ef1e4be3fa7150e76209d3ca6 166 SUPERFAMILY SSF88946 4 74 5.49E-11 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3683 1b0ac13ef1e4be3fa7150e76209d3ca6 166 Pfam PF04542 Sigma-70 region 2 17 77 3.4E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_3848 4d6aaf47f37834a2cb1689766148e5bc 175 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 28 175 5.0E-85 T 12-10-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PA257_3848 4d6aaf47f37834a2cb1689766148e5bc 175 Gene3D G3DSA:3.10.450.50 25 165 2.2E-45 T 12-10-2018 PA257_3848 4d6aaf47f37834a2cb1689766148e5bc 175 SUPERFAMILY SSF54427 33 162 6.67E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_3848 4d6aaf47f37834a2cb1689766148e5bc 175 Pfam PF03284 Phenazine biosynthesis protein A/B 23 175 1.4E-88 T 12-10-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PA257_0930 6440f6fa77379d524e4d0cf81d8c6f85 569 Pfam PF01425 Amidase 459 544 4.4E-6 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_0930 6440f6fa77379d524e4d0cf81d8c6f85 569 Pfam PF01425 Amidase 25 291 5.5E-45 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_0930 6440f6fa77379d524e4d0cf81d8c6f85 569 Gene3D G3DSA:3.90.1300.10 1 565 8.4E-100 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_0930 6440f6fa77379d524e4d0cf81d8c6f85 569 SUPERFAMILY SSF75304 1 561 2.35E-89 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_6323 bb12a56da790ba07a500a4fa55cb61be 357 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 206 1.5E-36 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_6323 bb12a56da790ba07a500a4fa55cb61be 357 Gene3D G3DSA:1.10.10.60 231 336 6.5E-24 T 12-10-2018 PA257_6323 bb12a56da790ba07a500a4fa55cb61be 357 SUPERFAMILY SSF46689 287 336 4.48E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6323 bb12a56da790ba07a500a4fa55cb61be 357 Pfam PF12833 Helix-turn-helix domain 258 335 3.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_6323 bb12a56da790ba07a500a4fa55cb61be 357 SMART SM00342 251 333 1.2E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_2211 3b178788f94f812d1ba95c958fa11258 299 Gene3D G3DSA:3.40.50.1100 114 299 4.3E-30 T 12-10-2018 PA257_2211 3b178788f94f812d1ba95c958fa11258 299 PIRSF PIRSF006278 1 298 4.6E-72 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase PA257_2211 3b178788f94f812d1ba95c958fa11258 299 SUPERFAMILY SSF53686 8 294 3.18E-55 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PA257_2211 3b178788f94f812d1ba95c958fa11258 299 Gene3D G3DSA:3.40.50.1100 31 113 1.0E-15 T 12-10-2018 PA257_2211 3b178788f94f812d1ba95c958fa11258 299 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 283 7.8E-15 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 Pfam PF02119 Flagellar P-ring protein 24 368 4.0E-146 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 6 369 42.04 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 24 39 8.1E-90 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 59 74 8.1E-90 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 39 54 8.1E-90 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 86 105 8.1E-90 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 192 210 8.1E-90 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 166 184 8.1E-90 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 108 125 8.1E-90 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 256 268 8.1E-90 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4736 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 125 143 8.1E-90 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PA257_4668 15b5c1f35071bc52973b9fa003d52f36 300 Gene3D G3DSA:3.40.190.10 104 270 2.7E-46 T 12-10-2018 PA257_4668 15b5c1f35071bc52973b9fa003d52f36 300 Pfam PF03466 LysR substrate binding domain 101 288 1.4E-28 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4668 15b5c1f35071bc52973b9fa003d52f36 300 SUPERFAMILY SSF46785 6 119 1.74E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4668 15b5c1f35071bc52973b9fa003d52f36 300 SUPERFAMILY SSF53850 101 291 6.52E-27 T 12-10-2018 PA257_4668 15b5c1f35071bc52973b9fa003d52f36 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 3.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4668 15b5c1f35071bc52973b9fa003d52f36 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4668 15b5c1f35071bc52973b9fa003d52f36 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4668 15b5c1f35071bc52973b9fa003d52f36 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_4668 15b5c1f35071bc52973b9fa003d52f36 300 Gene3D G3DSA:3.40.190.10 170 263 2.7E-46 T 12-10-2018 PA257_4668 15b5c1f35071bc52973b9fa003d52f36 300 Gene3D G3DSA:1.10.10.10 8 94 5.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5144 753bd7e8864635d70bace60fe3991d78 151 PIRSF PIRSF004923 1 150 1.6E-42 T 12-10-2018 IPR026268 Protein RseC PA257_5144 753bd7e8864635d70bace60fe3991d78 151 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 141 5.1E-32 T 12-10-2018 PA257_5999 2af3760d77c90e66b0cef9df02bfb0b3 297 Pfam PF00892 EamA-like transporter family 142 280 1.5E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_5999 2af3760d77c90e66b0cef9df02bfb0b3 297 Pfam PF00892 EamA-like transporter family 6 130 3.1E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_5999 2af3760d77c90e66b0cef9df02bfb0b3 297 SUPERFAMILY SSF103481 185 282 2.48E-13 T 12-10-2018 PA257_5999 2af3760d77c90e66b0cef9df02bfb0b3 297 SUPERFAMILY SSF103481 39 134 3.66E-12 T 12-10-2018 PA257_3092 105ada00ef5bafc76b58b4b5ca66e475 291 Gene3D G3DSA:1.10.760.10 161 271 1.9E-40 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3092 105ada00ef5bafc76b58b4b5ca66e475 291 SUPERFAMILY SSF46626 157 276 3.11E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3092 105ada00ef5bafc76b58b4b5ca66e475 291 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 167 246 5.8E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3092 105ada00ef5bafc76b58b4b5ca66e475 291 Gene3D G3DSA:1.10.760.10 23 153 2.8E-38 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3092 105ada00ef5bafc76b58b4b5ca66e475 291 SUPERFAMILY SSF46626 39 146 1.79E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_5289 027b952dca25ec146a563bf0696276e5 131 SUPERFAMILY SSF54593 1 126 5.91E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_5289 027b952dca25ec146a563bf0696276e5 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 1.3E-19 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_5289 027b952dca25ec146a563bf0696276e5 131 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 1.7E-54 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PA257_5289 027b952dca25ec146a563bf0696276e5 131 Gene3D G3DSA:3.10.180.10 1 131 6.0E-44 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_3722 83162269403b9575e9041b2095f1f7cc 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_3722 83162269403b9575e9041b2095f1f7cc 134 Gene3D G3DSA:1.10.1660.10 1 127 1.6E-25 T 12-10-2018 PA257_3722 83162269403b9575e9041b2095f1f7cc 134 SUPERFAMILY SSF46955 5 121 2.64E-24 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_3722 83162269403b9575e9041b2095f1f7cc 134 Pfam PF13411 MerR HTH family regulatory protein 5 70 4.2E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_3722 83162269403b9575e9041b2095f1f7cc 134 SMART SM00422 5 72 2.4E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 SMART SM00562 3 140 1.8E-91 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 5.3E-58 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 Gene3D G3DSA:3.30.70.141 1 141 5.1E-60 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 SUPERFAMILY SSF54919 1 140 6.29E-59 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.436 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.8E-41 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.8E-41 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.8E-41 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.8E-41 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_1361 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.8E-41 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PA257_5473 4c5afba7d803b5dbd2d90ff6fdb78903 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 47.077 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 PA257_5473 4c5afba7d803b5dbd2d90ff6fdb78903 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 7.5E-122 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 PA257_5473 4c5afba7d803b5dbd2d90ff6fdb78903 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 4.1E-109 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 PA257_5473 4c5afba7d803b5dbd2d90ff6fdb78903 303 SUPERFAMILY SSF54211 3 124 6.98E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_5473 4c5afba7d803b5dbd2d90ff6fdb78903 303 SUPERFAMILY SSF54211 134 277 1.82E-52 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_5473 4c5afba7d803b5dbd2d90ff6fdb78903 303 Gene3D G3DSA:3.30.230.20 1 127 2.5E-51 T 12-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 PA257_5473 4c5afba7d803b5dbd2d90ff6fdb78903 303 Gene3D G3DSA:3.30.1700.10 128 299 4.3E-71 T 12-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 PA257_5023 fea97424cbd1e6daac8550f31562b92e 227 ProSitePatterns PS01081 TetR-type HTH domain signature. 54 85 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PA257_5023 fea97424cbd1e6daac8550f31562b92e 227 SUPERFAMILY SSF46689 39 99 4.29E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5023 fea97424cbd1e6daac8550f31562b92e 227 Gene3D G3DSA:1.10.357.10 37 216 1.1E-22 T 12-10-2018 PA257_5023 fea97424cbd1e6daac8550f31562b92e 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 45 87 1.8E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1173 8e048150e10378ba929df78e280fbb3d 110 Pfam PF08850 Domain of unknown function (DUF1820) 8 103 1.5E-43 T 12-10-2018 IPR014949 Protein of unknown function DUF1820 PA257_1173 8e048150e10378ba929df78e280fbb3d 110 PIRSF PIRSF028538 2 109 9.3E-53 T 12-10-2018 IPR014949 Protein of unknown function DUF1820 PA257_0642 abbf3be982e4fb73fdcbfaffc54c2df4 274 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 26 272 1.3E-69 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 PA257_0642 abbf3be982e4fb73fdcbfaffc54c2df4 274 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 18 272 32.134 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 PA257_0642 abbf3be982e4fb73fdcbfaffc54c2df4 274 Pfam PF08241 Methyltransferase domain 62 155 3.0E-24 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PA257_0642 abbf3be982e4fb73fdcbfaffc54c2df4 274 SUPERFAMILY SSF53335 24 272 2.15E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_0642 abbf3be982e4fb73fdcbfaffc54c2df4 274 Gene3D G3DSA:3.40.50.150 23 230 5.9E-36 T 12-10-2018 PA257_2402 dfab8a11ef36bd44d3f18fd41aa40a97 366 SUPERFAMILY SSF111342 6 288 4.58E-83 T 12-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 PA257_2402 dfab8a11ef36bd44d3f18fd41aa40a97 366 PIRSF PIRSF026782 9 366 1.6E-122 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 PA257_2402 dfab8a11ef36bd44d3f18fd41aa40a97 366 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 361 27.553 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 PA257_2402 dfab8a11ef36bd44d3f18fd41aa40a97 366 Pfam PF01888 CbiD 12 271 1.2E-89 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 PA257_2402 dfab8a11ef36bd44d3f18fd41aa40a97 366 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 19 321 3.4E-57 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 PA257_2402 dfab8a11ef36bd44d3f18fd41aa40a97 366 Gene3D G3DSA:3.30.2110.10 14 186 4.8E-48 T 12-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 PA257_3265 a8d627a72c9e735486ecd5fdf6cd994e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.8E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3265 a8d627a72c9e735486ecd5fdf6cd994e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.8E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3265 a8d627a72c9e735486ecd5fdf6cd994e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.8E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3265 a8d627a72c9e735486ecd5fdf6cd994e 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 2.8E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_3265 a8d627a72c9e735486ecd5fdf6cd994e 213 SMART SM00448 9 125 2.2E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3265 a8d627a72c9e735486ecd5fdf6cd994e 213 Pfam PF00072 Response regulator receiver domain 11 125 3.7E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_3265 a8d627a72c9e735486ecd5fdf6cd994e 213 SUPERFAMILY SSF52172 9 131 9.68E-19 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3265 a8d627a72c9e735486ecd5fdf6cd994e 213 SUPERFAMILY SSF46894 146 212 4.76E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PA257_3265 a8d627a72c9e735486ecd5fdf6cd994e 213 Gene3D G3DSA:3.40.50.12740 9 213 4.4E-43 T 12-10-2018 PA257_3265 a8d627a72c9e735486ecd5fdf6cd994e 213 SMART SM00421 151 208 1.2E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PA257_5406 7f63a42920cba2dfa4ec583f53f03861 494 Gene3D G3DSA:3.90.1300.10 8 487 1.9E-135 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_5406 7f63a42920cba2dfa4ec583f53f03861 494 Pfam PF01425 Amidase 35 466 1.0E-88 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_5406 7f63a42920cba2dfa4ec583f53f03861 494 SUPERFAMILY SSF75304 13 484 3.14E-126 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PA257_1607 7aa48e88e60f2e4cd19a9246f2263064 482 SUPERFAMILY SSF53335 1 465 1.88E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5943 47c6aff6252669f9073a300921ffc100 266 Gene3D G3DSA:3.20.20.60 2 266 8.6E-105 T 12-10-2018 PA257_5943 47c6aff6252669f9073a300921ffc100 266 PIRSF PIRSF000388 2 266 1.5E-97 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PA257_5943 47c6aff6252669f9073a300921ffc100 266 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 4 264 6.8E-100 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PA257_5943 47c6aff6252669f9073a300921ffc100 266 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 259 1.2E-105 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PA257_5943 47c6aff6252669f9073a300921ffc100 266 SUPERFAMILY SSF51621 4 264 1.94E-101 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_5943 47c6aff6252669f9073a300921ffc100 266 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 264 41.269 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PA257_0412 5c3d7885b82d7b2b199066f111576f4e 267 Pfam PF01925 Sulfite exporter TauE/SafE 7 257 3.2E-56 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PA257_3909 be565780ffee0d8feaf16c3025416f71 762 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 79 761 1.9E-288 T 12-10-2018 IPR010706 Fatty acid cis-trans isomerase PA257_0973 0d075a54993e5ac553aa16fbde595973 434 Pfam PF07690 Major Facilitator Superfamily 30 392 7.4E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0973 0d075a54993e5ac553aa16fbde595973 434 Gene3D G3DSA:1.20.1250.20 13 428 5.2E-83 T 12-10-2018 PA257_0973 0d075a54993e5ac553aa16fbde595973 434 SUPERFAMILY SSF103473 18 426 3.66E-81 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0145 1390ea82a480edee6beef0faaff31c2d 128 PIRSF PIRSF007951 1 128 5.7E-55 T 12-10-2018 IPR009413 Hemolysin, aegerolysin type GO:0019836 PA257_0145 1390ea82a480edee6beef0faaff31c2d 128 Pfam PF06355 Aegerolysin 2 126 6.4E-42 T 12-10-2018 IPR009413 Hemolysin, aegerolysin type GO:0019836 PA257_0145 1390ea82a480edee6beef0faaff31c2d 128 Gene3D G3DSA:2.60.270.50 1 127 5.1E-36 T 12-10-2018 PA257_6872 0d7f5844f9a691130cf0a46494b03b9c 264 Gene3D G3DSA:3.40.190.10 120 211 1.3E-7 T 12-10-2018 PA257_6872 0d7f5844f9a691130cf0a46494b03b9c 264 SUPERFAMILY SSF53850 51 251 2.92E-19 T 12-10-2018 PA257_6872 0d7f5844f9a691130cf0a46494b03b9c 264 Gene3D G3DSA:3.40.190.10 52 250 1.3E-7 T 12-10-2018 PA257_1196 7b9c99b68434cebe6974064b915c2ca1 379 SUPERFAMILY SSF56219 73 375 4.19E-27 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_1196 7b9c99b68434cebe6974064b915c2ca1 379 Gene3D G3DSA:3.60.10.10 71 379 4.3E-41 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PA257_1196 7b9c99b68434cebe6974064b915c2ca1 379 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 76 357 6.9E-11 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PA257_5347 f32c4994125703e8730af875ff65003c 227 SUPERFAMILY SSF55681 6 214 3.23E-45 T 12-10-2018 PA257_5347 f32c4994125703e8730af875ff65003c 227 Gene3D G3DSA:3.30.930.10 3 221 1.3E-47 T 12-10-2018 PA257_4307 fe90f5d273927a4daeec44d72f7cfdef 366 SUPERFAMILY SSF56266 1 362 2.54E-115 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PA257_4307 fe90f5d273927a4daeec44d72f7cfdef 366 Pfam PF03576 Peptidase family S58 19 344 1.4E-109 T 12-10-2018 IPR005321 Peptidase S58, DmpA PA257_4307 fe90f5d273927a4daeec44d72f7cfdef 366 Gene3D G3DSA:3.60.70.12 1 363 3.0E-130 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PA257_5417 c319c1a95ecd54434c9dcbe4e1921677 190 PIRSF PIRSF011489 1 190 3.1E-82 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 PA257_5417 c319c1a95ecd54434c9dcbe4e1921677 190 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 184 1.9E-34 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 PA257_3530 5e346d3bab84623ea11c7cb58d4f813a 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 283 2.6E-18 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PA257_3530 5e346d3bab84623ea11c7cb58d4f813a 291 SUPERFAMILY SSF48179 164 287 5.89E-26 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PA257_3530 5e346d3bab84623ea11c7cb58d4f813a 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_3530 5e346d3bab84623ea11c7cb58d4f813a 291 Gene3D G3DSA:1.10.1040.10 159 290 1.1E-33 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PA257_3530 5e346d3bab84623ea11c7cb58d4f813a 291 PIRSF PIRSF000103 1 290 1.1E-75 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PA257_3530 5e346d3bab84623ea11c7cb58d4f813a 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 155 3.8E-34 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PA257_3530 5e346d3bab84623ea11c7cb58d4f813a 291 SUPERFAMILY SSF51735 1 159 4.76E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3530 5e346d3bab84623ea11c7cb58d4f813a 291 Gene3D G3DSA:3.40.50.720 1 158 1.8E-42 T 12-10-2018 PA257_4588 9dfd9a11f84565c37610529fc261c1e1 292 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 7 197 9.6E-31 T 12-10-2018 IPR008775 Phytanoyl-CoA dioxygenase PA257_4588 9dfd9a11f84565c37610529fc261c1e1 292 Gene3D G3DSA:2.60.120.620 2 208 2.4E-27 T 12-10-2018 PA257_4588 9dfd9a11f84565c37610529fc261c1e1 292 SUPERFAMILY SSF51197 5 215 5.4E-27 T 12-10-2018 PA257_5808 2afcd2d5bbc112543e79cfc9fa011bbb 568 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 208 528 1.7E-21 T 12-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal PA257_5808 2afcd2d5bbc112543e79cfc9fa011bbb 568 Gene3D G3DSA:3.10.20.310 59 146 1.7E-18 T 12-10-2018 PA257_5808 2afcd2d5bbc112543e79cfc9fa011bbb 568 Gene3D G3DSA:2.40.160.50 184 565 8.1E-70 T 12-10-2018 PA257_5808 2afcd2d5bbc112543e79cfc9fa011bbb 568 Pfam PF08479 POTRA domain, ShlB-type 71 146 1.3E-22 T 12-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type PA257_2189 f03a55b0de50664762580258dde70547 403 SUPERFAMILY SSF53383 41 401 1.29E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_2189 f03a55b0de50664762580258dde70547 403 Gene3D G3DSA:3.40.640.10 16 266 2.7E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_2189 f03a55b0de50664762580258dde70547 403 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 20 400 2.7E-203 T 12-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 PA257_2189 f03a55b0de50664762580258dde70547 403 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 21 401 54.903 T 12-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 PA257_2189 f03a55b0de50664762580258dde70547 403 PIRSF PIRSF001434 7 403 2.3E-134 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PA257_2189 f03a55b0de50664762580258dde70547 403 Gene3D G3DSA:3.90.1150.10 270 403 9.6E-52 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_2189 f03a55b0de50664762580258dde70547 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 211 225 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PA257_2189 f03a55b0de50664762580258dde70547 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 400 3.6E-144 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PA257_2487 17e8844812d8c4de75793de330b794ea 291 Hamap MF_00188 Protease HtpX [htpX]. 1 289 25.075 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 PA257_2487 17e8844812d8c4de75793de330b794ea 291 Gene3D G3DSA:3.30.2010.10 67 160 1.3E-33 T 12-10-2018 PA257_2487 17e8844812d8c4de75793de330b794ea 291 Pfam PF01435 Peptidase family M48 77 288 1.7E-37 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PA257_5998 3f188727c2e7eeaa105dbea3f227d13e 188 Pfam PF06042 Nucleotidyltransferase 28 179 1.5E-50 T 12-10-2018 IPR009267 Putative nucleotidyltransferase PA257_1109 7e680b0665270e26c03c45beaabee2c4 389 SUPERFAMILY SSF54826 1 136 5.38E-27 T 12-10-2018 PA257_1109 7e680b0665270e26c03c45beaabee2c4 389 SMART SM00922 162 259 3.0E-12 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PA257_1109 7e680b0665270e26c03c45beaabee2c4 389 Gene3D G3DSA:3.30.390.10 1 126 1.0E-49 T 12-10-2018 IPR029017 Enolase-like, N-terminal PA257_1109 7e680b0665270e26c03c45beaabee2c4 389 Gene3D G3DSA:3.20.20.120 127 381 6.4E-51 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PA257_1109 7e680b0665270e26c03c45beaabee2c4 389 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 44 133 3.6E-5 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PA257_1109 7e680b0665270e26c03c45beaabee2c4 389 Pfam PF13378 Enolase C-terminal domain-like 166 374 1.5E-31 T 12-10-2018 IPR029065 Enolase C-terminal domain-like PA257_1109 7e680b0665270e26c03c45beaabee2c4 389 SUPERFAMILY SSF51604 122 376 2.15E-43 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PA257_2931 4d7f511935de660e53780aba88cc3714 741 SUPERFAMILY SSF53659 5 740 0.0 T 12-10-2018 PA257_2931 4d7f511935de660e53780aba88cc3714 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 4 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PA257_2931 4d7f511935de660e53780aba88cc3714 741 PIRSF PIRSF009407 1 741 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PA257_2931 4d7f511935de660e53780aba88cc3714 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PA257_1887 daab11788386497e7048ad15b939db6f 121 Pfam PF10861 Protein of Unknown function (DUF2784) 4 111 1.9E-40 T 12-10-2018 IPR021218 Protein of unknown function DUF2784 PA257_4964 23c3ae92022592a67a3a1690af80b0e7 450 Pfam PF03972 MmgE/PrpD family 5 440 1.1E-135 T 12-10-2018 IPR005656 MmgE/PrpD GO:0016829 PA257_4964 23c3ae92022592a67a3a1690af80b0e7 450 SUPERFAMILY SSF103378 2 446 1.57E-121 T 12-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 PA257_4964 23c3ae92022592a67a3a1690af80b0e7 450 Gene3D G3DSA:3.30.1330.120 268 400 4.7E-100 T 12-10-2018 PA257_4964 23c3ae92022592a67a3a1690af80b0e7 450 Gene3D G3DSA:1.10.4100.10 25 417 4.7E-100 T 12-10-2018 PA257_6169 8e1703156a0c8c2e1327bcfa813ef313 167 Pfam PF05194 UreE urease accessory protein, C-terminal domain 73 150 3.8E-28 T 12-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 PA257_6169 8e1703156a0c8c2e1327bcfa813ef313 167 SMART SM00988 1 66 2.9E-24 T 12-10-2018 IPR004029 UreE urease accessory, N-terminal PA257_6169 8e1703156a0c8c2e1327bcfa813ef313 167 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 140 24.207 T 12-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 PA257_6169 8e1703156a0c8c2e1327bcfa813ef313 167 Gene3D G3DSA:3.30.70.790 73 143 1.1E-29 T 12-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 PA257_6169 8e1703156a0c8c2e1327bcfa813ef313 167 SUPERFAMILY SSF69737 73 139 7.98E-22 T 12-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 PA257_6169 8e1703156a0c8c2e1327bcfa813ef313 167 Gene3D G3DSA:2.60.260.20 1 71 3.5E-22 T 12-10-2018 PA257_6169 8e1703156a0c8c2e1327bcfa813ef313 167 Pfam PF02814 UreE urease accessory protein, N-terminal domain 6 66 7.6E-21 T 12-10-2018 IPR004029 UreE urease accessory, N-terminal PA257_6169 8e1703156a0c8c2e1327bcfa813ef313 167 SUPERFAMILY SSF69287 1 71 1.23E-16 T 12-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily PA257_6169 8e1703156a0c8c2e1327bcfa813ef313 167 PIRSF PIRSF036402 1 151 5.6E-52 T 12-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 PA257_5735 1b1f2cf79628cceb0f3380e111889368 169 Pfam PF01252 Signal peptidase (SPase) II 16 158 3.3E-39 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PA257_5735 1b1f2cf79628cceb0f3380e111889368 169 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 4.6E-42 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PA257_5735 1b1f2cf79628cceb0f3380e111889368 169 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PA257_5735 1b1f2cf79628cceb0f3380e111889368 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 5.1E-19 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PA257_5735 1b1f2cf79628cceb0f3380e111889368 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 139 155 5.1E-19 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PA257_5735 1b1f2cf79628cceb0f3380e111889368 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 5.1E-19 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PA257_5735 1b1f2cf79628cceb0f3380e111889368 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 164 17.719 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PA257_1538 d606e2220c45da534c86a6674a10bb8c 288 Pfam PF01904 Protein of unknown function DUF72 23 261 2.5E-51 T 12-10-2018 IPR002763 Protein of unknown function DUF72 PA257_1538 d606e2220c45da534c86a6674a10bb8c 288 SUPERFAMILY SSF117396 5 264 6.93E-69 T 12-10-2018 IPR036520 UPF0759 superfamily PA257_1538 d606e2220c45da534c86a6674a10bb8c 288 Gene3D G3DSA:3.20.20.410 3 267 6.0E-42 T 12-10-2018 IPR036520 UPF0759 superfamily PA257_5316 9d92a700d479f2fe67ed50dd40063354 404 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 1.4E-31 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_5316 9d92a700d479f2fe67ed50dd40063354 404 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.6E-28 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_5316 9d92a700d479f2fe67ed50dd40063354 404 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 5.0E-173 T 12-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 PA257_5316 9d92a700d479f2fe67ed50dd40063354 404 Gene3D G3DSA:1.20.81.30 256 367 3.0E-25 T 12-10-2018 PA257_5316 9d92a700d479f2fe67ed50dd40063354 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 7.0E-29 T 12-10-2018 IPR003004 GspF/PilC family PA257_5316 9d92a700d479f2fe67ed50dd40063354 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 7.0E-29 T 12-10-2018 IPR003004 GspF/PilC family PA257_5316 9d92a700d479f2fe67ed50dd40063354 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 7.0E-29 T 12-10-2018 IPR003004 GspF/PilC family PA257_5316 9d92a700d479f2fe67ed50dd40063354 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 7.0E-29 T 12-10-2018 IPR003004 GspF/PilC family PA257_5316 9d92a700d479f2fe67ed50dd40063354 404 Gene3D G3DSA:1.20.81.30 55 172 2.3E-28 T 12-10-2018 PA257_4054 988e1490f8c4a04bd74ba9d2ca304236 115 Gene3D G3DSA:1.25.40.10 1 115 1.8E-56 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4054 988e1490f8c4a04bd74ba9d2ca304236 115 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 114 2.0E-42 T 12-10-2018 IPR013348 Type III secretion system YscG GO:0009405 PA257_4054 988e1490f8c4a04bd74ba9d2ca304236 115 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 115 8.2E-57 T 12-10-2018 IPR013348 Type III secretion system YscG GO:0009405 PA257_5226 72f48bc614677700929360f161a6fdf3 205 SUPERFAMILY SSF52833 15 180 3.31E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_5226 72f48bc614677700929360f161a6fdf3 205 Pfam PF13462 Thioredoxin 16 162 8.2E-15 T 12-10-2018 IPR012336 Thioredoxin-like fold PA257_5226 72f48bc614677700929360f161a6fdf3 205 Gene3D G3DSA:3.40.30.10 15 186 1.9E-34 T 12-10-2018 PA257_4003 8b1f490aa3ba253d5ba167e349708427 272 Pfam PF03618 Kinase/pyrophosphorylase 6 262 7.6E-77 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 PA257_4003 8b1f490aa3ba253d5ba167e349708427 272 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 271 77.752 T 12-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein PA257_2037 136bae3326b77687cabfbf4e132820e9 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 270 5.5E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_2037 136bae3326b77687cabfbf4e132820e9 279 SUPERFAMILY SSF161098 7 275 8.11E-43 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2037 136bae3326b77687cabfbf4e132820e9 279 Gene3D G3DSA:1.10.3720.10 4 268 4.5E-36 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1556 2ec4c26e71c474e30f0ef162282ea8a7 207 Pfam PF01810 LysE type translocator 14 203 1.8E-26 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_1556 2ec4c26e71c474e30f0ef162282ea8a7 207 PIRSF PIRSF006324 1 205 2.9E-49 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_4103 75c247153b9c75422fcb70ef55cc7c66 109 SUPERFAMILY SSF54593 2 102 4.51E-13 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4103 75c247153b9c75422fcb70ef55cc7c66 109 Gene3D G3DSA:3.10.180.10 1 105 5.6E-15 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_1593 c4239cb061ab2a3f25887fc2cb8a2cc3 283 SUPERFAMILY SSF53474 5 282 2.39E-94 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1593 c4239cb061ab2a3f25887fc2cb8a2cc3 283 Gene3D G3DSA:3.40.50.1820 5 282 9.8E-95 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1593 c4239cb061ab2a3f25887fc2cb8a2cc3 283 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 281 1.7E-127 T 12-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 PA257_1593 c4239cb061ab2a3f25887fc2cb8a2cc3 283 Pfam PF00756 Putative esterase 25 275 4.8E-63 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PIRSF PIRSF019574 1 365 3.6E-143 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 4.0E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 4.0E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 4.0E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 4.0E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 4.0E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 4.0E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 4.0E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 4.0E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 4.0E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 4.0E-65 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0367 5391c0ddf46cb86674335997bb110489 365 Pfam PF13416 Bacterial extracellular solute-binding protein 43 326 1.8E-35 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_0367 5391c0ddf46cb86674335997bb110489 365 Gene3D G3DSA:3.40.190.10 133 360 7.9E-138 T 12-10-2018 PA257_0367 5391c0ddf46cb86674335997bb110489 365 SUPERFAMILY SSF53850 27 364 3.83E-103 T 12-10-2018 PA257_0367 5391c0ddf46cb86674335997bb110489 365 Gene3D G3DSA:3.40.190.10 30 331 7.9E-138 T 12-10-2018 PA257_2429 bfd14d9373f9737c142e1f76b9dccab9 303 Gene3D G3DSA:3.40.50.2300 2 128 1.7E-28 T 12-10-2018 PA257_2429 bfd14d9373f9737c142e1f76b9dccab9 303 Gene3D G3DSA:3.40.50.2300 134 266 2.4E-13 T 12-10-2018 PA257_2429 bfd14d9373f9737c142e1f76b9dccab9 303 SMART SM00448 141 253 0.051 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2429 bfd14d9373f9737c142e1f76b9dccab9 303 SMART SM00448 6 117 2.0E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2429 bfd14d9373f9737c142e1f76b9dccab9 303 SUPERFAMILY SSF52172 4 123 4.13E-30 T 12-10-2018 IPR011006 CheY-like superfamily PA257_2429 bfd14d9373f9737c142e1f76b9dccab9 303 Pfam PF00072 Response regulator receiver domain 143 247 1.3E-7 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2429 bfd14d9373f9737c142e1f76b9dccab9 303 Pfam PF00072 Response regulator receiver domain 8 114 7.9E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2429 bfd14d9373f9737c142e1f76b9dccab9 303 SUPERFAMILY SSF52172 140 265 2.99E-15 T 12-10-2018 IPR011006 CheY-like superfamily PA257_4611 8d84f9356b5b13c6fec958c0dbf37d9f 254 Pfam PF02274 Amidinotransferase 31 251 2.5E-16 T 12-10-2018 PA257_4611 8d84f9356b5b13c6fec958c0dbf37d9f 254 SUPERFAMILY SSF55909 2 253 1.59E-58 T 12-10-2018 PA257_4611 8d84f9356b5b13c6fec958c0dbf37d9f 254 Gene3D G3DSA:3.75.10.10 1 254 2.6E-77 T 12-10-2018 PA257_5903 e41b080caf28c9fa1bbb5aca29a54b4b 271 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 50 210 2.3E-38 T 12-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 PA257_5903 e41b080caf28c9fa1bbb5aca29a54b4b 271 Pfam PF01066 CDP-alcohol phosphatidyltransferase 43 106 5.7E-13 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PA257_5903 e41b080caf28c9fa1bbb5aca29a54b4b 271 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 84 106 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PA257_5903 e41b080caf28c9fa1bbb5aca29a54b4b 271 Gene3D G3DSA:1.20.120.1760 35 181 3.5E-14 T 12-10-2018 PA257_0146 1540818b96c0d69f94c2890eda60fa72 302 SUPERFAMILY SSF53850 90 295 7.78E-39 T 12-10-2018 PA257_0146 1540818b96c0d69f94c2890eda60fa72 302 SUPERFAMILY SSF46785 4 111 1.75E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0146 1540818b96c0d69f94c2890eda60fa72 302 Gene3D G3DSA:3.40.190.290 91 292 6.9E-54 T 12-10-2018 PA257_0146 1540818b96c0d69f94c2890eda60fa72 302 Gene3D G3DSA:1.10.10.10 3 89 8.1E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_0146 1540818b96c0d69f94c2890eda60fa72 302 Pfam PF03466 LysR substrate binding domain 88 293 7.0E-41 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_0146 1540818b96c0d69f94c2890eda60fa72 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.7E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_2922 355d166b7b05a5032c76f06b0991e74f 273 Pfam PF03958 Bacterial type II/III secretion system short domain 26 83 3.2E-10 T 12-10-2018 IPR005644 NolW-like PA257_2922 355d166b7b05a5032c76f06b0991e74f 273 Gene3D G3DSA:3.30.1370.120 11 86 2.3E-9 T 12-10-2018 IPR038591 NolW-like superfamily PA257_2922 355d166b7b05a5032c76f06b0991e74f 273 Pfam PF00263 Bacterial type II and III secretion system protein 137 248 1.4E-7 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 PA257_5640 31707848eae549efa64212c66f066be9 162 Gene3D G3DSA:2.40.50.140 4 154 7.8E-22 T 12-10-2018 PA257_5640 31707848eae549efa64212c66f066be9 162 Pfam PF00436 Single-strand binding protein family 5 110 1.9E-12 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 PA257_5640 31707848eae549efa64212c66f066be9 162 SUPERFAMILY SSF50249 4 162 1.06E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_5640 31707848eae549efa64212c66f066be9 162 PIRSF PIRSF002070 1 160 1.7E-17 T 12-10-2018 PA257_5640 31707848eae549efa64212c66f066be9 162 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 8 161 1.8E-16 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 PA257_1396 0c41c59c930b8d8a4b863f1829301bbf 260 Pfam PF01925 Sulfite exporter TauE/SafE 25 252 3.2E-29 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PA257_6245 d5471ac3b534e2c06739515375078758 178 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 5 166 1.7E-29 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase PA257_3404 7fab702c59f88420487fcb7338d6568b 577 SUPERFAMILY SSF51905 7 567 4.22E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3404 7fab702c59f88420487fcb7338d6568b 577 SUPERFAMILY SSF56425 324 502 7.67E-35 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_3404 7fab702c59f88420487fcb7338d6568b 577 Pfam PF00890 FAD binding domain 14 549 3.0E-116 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PA257_1526 a7c96bfa9f540923dfef1813cf29e47f 301 Pfam PF12146 Serine aminopeptidase, S33 67 171 4.3E-15 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 PA257_1526 a7c96bfa9f540923dfef1813cf29e47f 301 Gene3D G3DSA:3.40.50.1820 25 277 2.3E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1526 a7c96bfa9f540923dfef1813cf29e47f 301 SUPERFAMILY SSF53474 26 276 4.97E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1526 a7c96bfa9f540923dfef1813cf29e47f 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 98 109 3.0E-6 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PA257_1526 a7c96bfa9f540923dfef1813cf29e47f 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 142 156 3.0E-6 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PA257_1526 a7c96bfa9f540923dfef1813cf29e47f 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 71 79 3.0E-6 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PA257_1526 a7c96bfa9f540923dfef1813cf29e47f 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 156 169 7.0E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_1526 a7c96bfa9f540923dfef1813cf29e47f 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 110 7.0E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_1526 a7c96bfa9f540923dfef1813cf29e47f 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 7.0E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_3418 317b177ca35b036b882eaaffad075727 198 SUPERFAMILY SSF53955 12 158 3.21E-24 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_3418 317b177ca35b036b882eaaffad075727 198 Gene3D G3DSA:1.10.530.10 31 193 1.4E-13 T 12-10-2018 PA257_6722 2f7b9e0750b55a019522f844daf10501 88 SMART SM01409 8 61 4.8E-17 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PA257_6722 2f7b9e0750b55a019522f844daf10501 88 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 8.0E-23 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_6722 2f7b9e0750b55a019522f844daf10501 88 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.792 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PA257_6722 2f7b9e0750b55a019522f844daf10501 88 SUPERFAMILY SSF63562 1 77 2.79E-25 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PA257_6722 2f7b9e0750b55a019522f844daf10501 88 Gene3D G3DSA:3.90.940.10 1 86 3.5E-26 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PA257_6722 2f7b9e0750b55a019522f844daf10501 88 Pfam PF01192 RNA polymerase Rpb6 8 59 4.7E-17 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PA257_0173 ffb1a6e99850737152c298032f0f601c 320 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 174 274 7.1E-25 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PA257_0173 ffb1a6e99850737152c298032f0f601c 320 PRINTS PR00682 Isopenicillin N synthase signature 149 165 6.2E-14 T 12-10-2018 PA257_0173 ffb1a6e99850737152c298032f0f601c 320 PRINTS PR00682 Isopenicillin N synthase signature 234 260 6.2E-14 T 12-10-2018 PA257_0173 ffb1a6e99850737152c298032f0f601c 320 PRINTS PR00682 Isopenicillin N synthase signature 27 44 6.2E-14 T 12-10-2018 PA257_0173 ffb1a6e99850737152c298032f0f601c 320 Gene3D G3DSA:2.60.120.330 1 319 1.3E-112 T 12-10-2018 IPR027443 Isopenicillin N synthase-like PA257_0173 ffb1a6e99850737152c298032f0f601c 320 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 4 128 4.5E-32 T 12-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain PA257_0173 ffb1a6e99850737152c298032f0f601c 320 SUPERFAMILY SSF51197 3 314 1.99E-101 T 12-10-2018 PA257_6896 3b2dea4e5c5f059c87a759343cca0f01 316 Pfam PF01636 Phosphotransferase enzyme family 28 254 1.4E-36 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase PA257_6896 3b2dea4e5c5f059c87a759343cca0f01 316 Gene3D G3DSA:3.90.1200.10 105 314 4.0E-65 T 12-10-2018 PA257_6896 3b2dea4e5c5f059c87a759343cca0f01 316 Gene3D G3DSA:3.30.200.20 1 101 9.4E-33 T 12-10-2018 PA257_6896 3b2dea4e5c5f059c87a759343cca0f01 316 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 303 3.4E-86 T 12-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 PA257_6896 3b2dea4e5c5f059c87a759343cca0f01 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 147.122 T 12-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 PA257_6896 3b2dea4e5c5f059c87a759343cca0f01 316 SUPERFAMILY SSF56112 5 306 8.89E-68 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_4064 d8c990a47abf17ccc85615887163d034 145 Pfam PF05932 Tir chaperone protein (CesT) family 9 126 2.0E-24 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 PA257_4064 d8c990a47abf17ccc85615887163d034 145 Gene3D G3DSA:3.30.1460.10 1 133 2.8E-35 T 12-10-2018 PA257_4064 d8c990a47abf17ccc85615887163d034 145 SUPERFAMILY SSF69635 4 129 5.23E-28 T 12-10-2018 PA257_0934 df436de628992cb39e7d59055c89c197 301 SUPERFAMILY SSF53807 29 287 6.28E-38 T 12-10-2018 PA257_0934 df436de628992cb39e7d59055c89c197 301 Gene3D G3DSA:3.40.50.1980 131 301 2.3E-58 T 12-10-2018 PA257_0934 df436de628992cb39e7d59055c89c197 301 Pfam PF01497 Periplasmic binding protein 33 280 1.4E-41 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain PA257_0934 df436de628992cb39e7d59055c89c197 301 Gene3D G3DSA:3.40.50.1980 24 130 1.3E-18 T 12-10-2018 PA257_5703 f0fc821df98cf248403c7cc690ee3024 59 Gene3D G3DSA:3.40.30.10 2 59 2.2E-7 T 12-10-2018 PA257_2165 4a0bbaba02a8dfd986aa66cbbdfdf721 215 Pfam PF01081 KDPG and KHG aldolase 10 201 1.6E-68 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PA257_2165 4a0bbaba02a8dfd986aa66cbbdfdf721 215 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 38 47 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PA257_2165 4a0bbaba02a8dfd986aa66cbbdfdf721 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 207 1.0E-85 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PA257_2165 4a0bbaba02a8dfd986aa66cbbdfdf721 215 Gene3D G3DSA:3.20.20.70 7 210 1.5E-71 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2165 4a0bbaba02a8dfd986aa66cbbdfdf721 215 SUPERFAMILY SSF51569 10 208 3.3E-66 T 12-10-2018 PA257_6666 89f960787b9d04930f370f3e0363db6e 303 Pfam PF06114 IrrE N-terminal-like domain 98 216 8.0E-18 T 12-10-2018 IPR010359 IrrE N-terminal-like domain PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 Gene3D G3DSA:1.10.760.10 195 287 1.5E-76 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 SUPERFAMILY SSF46626 55 219 2.47E-32 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 140 214 5.6E-14 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 229 307 2.8E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 Gene3D G3DSA:1.10.760.10 116 310 1.5E-76 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 Gene3D G3DSA:1.20.58.1490 1 94 1.7E-37 T 12-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 SUPERFAMILY SSF46626 225 313 1.69E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 4.4E-23 T 12-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 33 314 1.1E-80 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 PIRSF PIRSF000006 1 314 2.4E-106 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 PRINTS PR00605 Class IC cytochrome C signature 192 214 2.8E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PA257_4235 f6fca4d1ebe70dff01776022797e8420 318 PRINTS PR00605 Class IC cytochrome C signature 150 161 2.8E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PA257_0058 87c311eccf800952f68b3f7c3a84290b 68 Gene3D G3DSA:3.30.70.1290 1 65 3.7E-6 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 PA257_0058 87c311eccf800952f68b3f7c3a84290b 68 SUPERFAMILY SSF143422 3 42 1.26E-5 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 PA257_4100 15f016a84706a87f90eb0783d3d83d02 185 SUPERFAMILY SSF160443 94 176 1.7E-15 T 12-10-2018 IPR036063 Smr domain superfamily PA257_4100 15f016a84706a87f90eb0783d3d83d02 185 Gene3D G3DSA:3.30.1370.110 46 180 7.4E-41 T 12-10-2018 PA257_4100 15f016a84706a87f90eb0783d3d83d02 185 SMART SM00463 92 176 1.0E-8 T 12-10-2018 IPR002625 Smr domain PA257_4100 15f016a84706a87f90eb0783d3d83d02 185 Pfam PF01713 Smr domain 95 176 2.3E-21 T 12-10-2018 IPR002625 Smr domain PA257_2491 6418c0f43374c5dd3d8c5df23126d87f 161 SUPERFAMILY SSF52833 5 160 2.05E-60 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2491 6418c0f43374c5dd3d8c5df23126d87f 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 PA257_2491 6418c0f43374c5dd3d8c5df23126d87f 161 Gene3D G3DSA:3.40.30.10 2 161 1.3E-65 T 12-10-2018 PA257_2491 6418c0f43374c5dd3d8c5df23126d87f 161 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.7E-20 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_2491 6418c0f43374c5dd3d8c5df23126d87f 161 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.7E-20 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_2491 6418c0f43374c5dd3d8c5df23126d87f 161 PRINTS PR01011 Glutathione peroxidase family signature 124 133 2.7E-20 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_2491 6418c0f43374c5dd3d8c5df23126d87f 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 12-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 PA257_2491 6418c0f43374c5dd3d8c5df23126d87f 161 PIRSF PIRSF000303 1 161 4.1E-64 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_2491 6418c0f43374c5dd3d8c5df23126d87f 161 Pfam PF00255 Glutathione peroxidase 8 112 6.8E-40 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_1214 293bdae383efa8c5c0aef6ab6611e4cc 289 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.9E-91 T 12-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 PA257_1214 293bdae383efa8c5c0aef6ab6611e4cc 289 SUPERFAMILY SSF54637 117 285 1.45E-60 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_1214 293bdae383efa8c5c0aef6ab6611e4cc 289 SUPERFAMILY SSF54637 5 114 7.46E-41 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_1214 293bdae383efa8c5c0aef6ab6611e4cc 289 Gene3D G3DSA:3.10.129.90 2 286 1.4E-109 T 12-10-2018 PA257_1214 293bdae383efa8c5c0aef6ab6611e4cc 289 Pfam PF13622 Thioesterase-like superfamily 33 282 2.4E-62 T 12-10-2018 PA257_4616 a441fb16cf0ec1c7bad2dc191d099e24 199 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 8.0E-57 T 12-10-2018 IPR009698 Protein of unknown function DUF1282 PA257_4661 2c8a8a70a6492d41108c7ef391d9aa85 496 Pfam PF13520 Amino acid permease 27 463 1.0E-40 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_4661 2c8a8a70a6492d41108c7ef391d9aa85 496 PIRSF PIRSF006060 9 488 4.3E-54 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_4661 2c8a8a70a6492d41108c7ef391d9aa85 496 Gene3D G3DSA:1.20.1740.10 22 417 2.6E-41 T 12-10-2018 PA257_2701 c7a16e259bc6c006292782240a2bd72c 400 Pfam PF03237 Terminase-like family 2 201 2.3E-21 T 12-10-2018 IPR004921 Terminase large subunit, T4likevirus-type PA257_2701 c7a16e259bc6c006292782240a2bd72c 400 Gene3D G3DSA:3.30.420.280 203 388 9.0E-8 T 12-10-2018 PA257_2701 c7a16e259bc6c006292782240a2bd72c 400 Gene3D G3DSA:3.40.50.300 1 193 2.5E-17 T 12-10-2018 PA257_2701 c7a16e259bc6c006292782240a2bd72c 400 Pfam PF17289 Terminase RNaseH-like domain 223 384 4.3E-6 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like PA257_4654 9c759dc521928857d9ec92623672aead 177 Gene3D G3DSA:3.30.70.1290 1 177 3.0E-51 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 PA257_4654 9c759dc521928857d9ec92623672aead 177 SUPERFAMILY SSF143422 1 138 1.7E-36 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 PA257_4654 9c759dc521928857d9ec92623672aead 177 Pfam PF01797 Transposase IS200 like 14 130 8.6E-9 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PA257_4654 9c759dc521928857d9ec92623672aead 177 SMART SM01321 9 132 2.3E-40 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PA257_4602 0de0460f16c07376e88de9af2c2f51e4 185 SUPERFAMILY SSF52218 6 176 1.04E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_4602 0de0460f16c07376e88de9af2c2f51e4 185 Gene3D G3DSA:3.40.50.360 1 184 3.6E-65 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_4602 0de0460f16c07376e88de9af2c2f51e4 185 Pfam PF03358 NADPH-dependent FMN reductase 6 150 2.8E-39 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PA257_1805 4532ea4dfb8d133d64bed24ab113429a 571 SUPERFAMILY SSF103473 36 418 5.89E-49 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1805 4532ea4dfb8d133d64bed24ab113429a 571 Gene3D G3DSA:1.20.1250.20 31 418 9.8E-38 T 12-10-2018 PA257_1805 4532ea4dfb8d133d64bed24ab113429a 571 Pfam PF05977 Transmembrane secretion effector 26 543 1.0E-219 T 12-10-2018 IPR010290 Transmembrane secretion effector PA257_4726 8a606a119268f0d52f90eb3b6c53a52e 204 SUPERFAMILY SSF51161 47 175 3.19E-19 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_4726 8a606a119268f0d52f90eb3b6c53a52e 204 Gene3D G3DSA:2.160.10.10 85 177 1.6E-15 T 12-10-2018 PA257_4726 8a606a119268f0d52f90eb3b6c53a52e 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 129 160 8.7E-5 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_5206 da9f57bcd6792d0413d575c115c6c7b2 373 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 108 114 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_5206 da9f57bcd6792d0413d575c115c6c7b2 373 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 105 117 4.3E-8 T 12-10-2018 PA257_5206 da9f57bcd6792d0413d575c115c6c7b2 373 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 134 158 4.3E-8 T 12-10-2018 PA257_5206 da9f57bcd6792d0413d575c115c6c7b2 373 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 45 59 4.3E-8 T 12-10-2018 PA257_5206 da9f57bcd6792d0413d575c115c6c7b2 373 SUPERFAMILY SSF53335 18 204 5.02E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5206 da9f57bcd6792d0413d575c115c6c7b2 373 Gene3D G3DSA:3.40.50.150 20 210 4.4E-17 T 12-10-2018 PA257_1181 c9b6acb87369188b306172fb5e7d8f62 143 SUPERFAMILY SSF54637 2 139 5.27E-29 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_1181 c9b6acb87369188b306172fb5e7d8f62 143 Gene3D G3DSA:3.10.129.10 3 140 4.2E-34 T 12-10-2018 PA257_1181 c9b6acb87369188b306172fb5e7d8f62 143 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 1.5E-18 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PA257_1181 c9b6acb87369188b306172fb5e7d8f62 143 Pfam PF03061 Thioesterase superfamily 50 124 6.4E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_5364 4f04c44d66a718dbb743dc4d99feeb43 394 Gene3D G3DSA:3.40.50.300 149 373 5.9E-29 T 12-10-2018 PA257_5364 4f04c44d66a718dbb743dc4d99feeb43 394 Gene3D G3DSA:3.40.50.2300 1 130 2.0E-51 T 12-10-2018 PA257_5364 4f04c44d66a718dbb743dc4d99feeb43 394 SUPERFAMILY SSF52540 150 372 7.54E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5364 4f04c44d66a718dbb743dc4d99feeb43 394 Pfam PF16968 Pilus assembly protein TadZ N-terminal 1 133 4.2E-87 T 12-10-2018 IPR031580 Pilus assembly protein TadZ, N-terminal PA257_4873 96bd86c41b7f9036d273a1e8368e7d84 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.6E-102 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4873 96bd86c41b7f9036d273a1e8368e7d84 248 SUPERFAMILY SSF75625 3 246 3.79E-96 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4873 96bd86c41b7f9036d273a1e8368e7d84 248 Gene3D G3DSA:3.30.70.980 86 236 2.8E-57 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4873 96bd86c41b7f9036d273a1e8368e7d84 248 Pfam PF01709 Transcriptional regulator 5 237 6.4E-94 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4873 96bd86c41b7f9036d273a1e8368e7d84 248 Gene3D G3DSA:1.10.10.200 1 81 9.6E-34 T 12-10-2018 IPR017856 Integrase-like, N-terminal PA257_4873 96bd86c41b7f9036d273a1e8368e7d84 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.288 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4873 96bd86c41b7f9036d273a1e8368e7d84 248 Gene3D G3DSA:3.30.70.980 130 205 2.8E-57 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_1209 5a7430a5132ab923f04e5db7e089dedf 396 Pfam PF00072 Response regulator receiver domain 10 124 4.1E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1209 5a7430a5132ab923f04e5db7e089dedf 396 SMART SM00052 143 388 2.7E-70 T 12-10-2018 IPR001633 EAL domain PA257_1209 5a7430a5132ab923f04e5db7e089dedf 396 SUPERFAMILY SSF52172 5 186 6.69E-21 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1209 5a7430a5132ab923f04e5db7e089dedf 396 SUPERFAMILY SSF141868 150 393 1.06E-72 T 12-10-2018 IPR035919 EAL domain superfamily PA257_1209 5a7430a5132ab923f04e5db7e089dedf 396 Pfam PF00563 EAL domain 150 383 1.2E-63 T 12-10-2018 IPR001633 EAL domain PA257_1209 5a7430a5132ab923f04e5db7e089dedf 396 SMART SM00448 8 126 1.2E-9 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_1209 5a7430a5132ab923f04e5db7e089dedf 396 Gene3D G3DSA:3.20.20.450 145 395 7.5E-83 T 12-10-2018 IPR035919 EAL domain superfamily PA257_1209 5a7430a5132ab923f04e5db7e089dedf 396 Gene3D G3DSA:3.40.50.2300 5 143 6.2E-28 T 12-10-2018 PA257_5836 fac06e5c46a451ab64b2b32315c72dcb 181 SMART SM00972 120 178 7.4E-22 T 12-10-2018 IPR007893 Spore coat protein U PA257_5836 fac06e5c46a451ab64b2b32315c72dcb 181 Pfam PF05229 Spore Coat Protein U domain 32 178 2.7E-36 T 12-10-2018 IPR007893 Spore coat protein U PA257_5093 1d682ff894121dc6053f59031fb2af85 415 Pfam PF00266 Aminotransferase class-V 34 401 2.4E-31 T 12-10-2018 IPR000192 Aminotransferase class V domain PA257_5093 1d682ff894121dc6053f59031fb2af85 415 Gene3D G3DSA:3.90.1150.10 29 401 1.5E-76 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_5093 1d682ff894121dc6053f59031fb2af85 415 SUPERFAMILY SSF53383 17 411 1.08E-57 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_5093 1d682ff894121dc6053f59031fb2af85 415 Gene3D G3DSA:3.40.640.10 42 304 1.5E-76 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_4520 c69580582664cf5e45012e68bc065452 173 PIRSF PIRSF006135 1 171 4.2E-52 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 PA257_4520 c69580582664cf5e45012e68bc065452 173 SUPERFAMILY SSF52540 4 169 2.12E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4520 c69580582664cf5e45012e68bc065452 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 167 6.7E-59 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 PA257_4520 c69580582664cf5e45012e68bc065452 173 Gene3D G3DSA:3.40.50.300 3 169 1.2E-55 T 12-10-2018 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 SUPERFAMILY SSF53850 20 348 3.23E-78 T 12-10-2018 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 PIRSF PIRSF019574 4 352 1.1E-97 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 Pfam PF13416 Bacterial extracellular solute-binding protein 36 310 2.5E-27 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_0361 70f1ad2c0da8d91864761584534ed532 353 Gene3D G3DSA:3.40.190.10 126 346 7.2E-105 T 12-10-2018 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 117 133 1.1E-38 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 63 1.1E-38 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 84 97 1.1E-38 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 147 161 1.1E-38 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 170 189 1.1E-38 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 296 322 1.1E-38 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 207 226 1.1E-38 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 251 270 1.1E-38 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 26 42 1.1E-38 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0361 70f1ad2c0da8d91864761584534ed532 353 Gene3D G3DSA:3.40.190.10 23 320 7.2E-105 T 12-10-2018 PA257_4059 9def27a768548eb752c0d279fbfaa189 236 Pfam PF16806 Antiactivator protein ExsD 2 234 3.2E-101 T 12-10-2018 IPR031835 Antiactivator protein ExsD PA257_4059 9def27a768548eb752c0d279fbfaa189 236 Gene3D G3DSA:1.20.1270.190 167 236 8.9E-32 T 12-10-2018 PA257_4059 9def27a768548eb752c0d279fbfaa189 236 Gene3D G3DSA:1.10.8.520 1 68 9.1E-36 T 12-10-2018 PA257_4059 9def27a768548eb752c0d279fbfaa189 236 Gene3D G3DSA:1.10.287.1060 98 166 1.6E-48 T 12-10-2018 PA257_0463 205029d1904f1920ce09ac3bbda1eefa 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 5 197 48.896 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 PA257_0463 205029d1904f1920ce09ac3bbda1eefa 197 SUPERFAMILY SSF52972 4 195 2.88E-68 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PA257_0463 205029d1904f1920ce09ac3bbda1eefa 197 Gene3D G3DSA:3.90.950.10 1 196 1.5E-71 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PA257_0463 205029d1904f1920ce09ac3bbda1eefa 197 Pfam PF01725 Ham1 family 7 193 8.3E-56 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 PA257_0463 205029d1904f1920ce09ac3bbda1eefa 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 7 195 7.9E-57 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 PA257_2343 0ab95a6bc6f8b4bb53a60af22c67e197 349 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 1 334 32.306 T 12-10-2018 IPR003770 Endolytic murein transglycosylase PA257_2343 0ab95a6bc6f8b4bb53a60af22c67e197 349 Pfam PF02618 YceG-like family 43 327 3.0E-76 T 12-10-2018 IPR003770 Endolytic murein transglycosylase PA257_2343 0ab95a6bc6f8b4bb53a60af22c67e197 349 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 329 3.5E-81 T 12-10-2018 IPR003770 Endolytic murein transglycosylase PA257_2343 0ab95a6bc6f8b4bb53a60af22c67e197 349 Gene3D G3DSA:3.30.160.60 302 337 8.7E-13 T 12-10-2018 PA257_1176 3ad1a7df1c941b93fa06d8e53fedacef 209 SUPERFAMILY SSF51391 3 200 6.41E-58 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PA257_1176 3ad1a7df1c941b93fa06d8e53fedacef 209 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 197 6.3E-61 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PA257_1176 3ad1a7df1c941b93fa06d8e53fedacef 209 Pfam PF02581 Thiamine monophosphate synthase 6 186 6.3E-54 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PA257_1176 3ad1a7df1c941b93fa06d8e53fedacef 209 Gene3D G3DSA:3.20.20.70 1 207 2.3E-57 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1176 3ad1a7df1c941b93fa06d8e53fedacef 209 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 207 25.083 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PA257_6882 7a5b17038fa4c881f96c81528fb53ca4 155 Gene3D G3DSA:3.40.1420.10 27 155 4.1E-40 T 12-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily PA257_6882 7a5b17038fa4c881f96c81528fb53ca4 155 PIRSF PIRSF009103 1 155 1.2E-67 T 12-10-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PA257_6882 7a5b17038fa4c881f96c81528fb53ca4 155 SUPERFAMILY SSF89872 27 155 4.58E-50 T 12-10-2018 IPR036501 Inhibitor of vertebrate lysozyme superfamily PA257_6882 7a5b17038fa4c881f96c81528fb53ca4 155 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 38 153 2.8E-46 T 12-10-2018 PA257_0345 c96f930fd7129c977e11b68f9b359d09 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 280 1.8E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0345 c96f930fd7129c977e11b68f9b359d09 289 Gene3D G3DSA:1.10.3720.10 23 282 4.4E-63 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0345 c96f930fd7129c977e11b68f9b359d09 289 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 22 279 4.7E-122 T 12-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 PA257_0345 c96f930fd7129c977e11b68f9b359d09 289 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 25 276 4.5E-97 T 12-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 PA257_0345 c96f930fd7129c977e11b68f9b359d09 289 SUPERFAMILY SSF161098 23 274 2.09E-53 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1856 f06ea6b00ba6ef8a56e25c625ff8fbf6 370 Gene3D G3DSA:4.10.320.10 104 155 4.1E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PA257_1856 f06ea6b00ba6ef8a56e25c625ff8fbf6 370 SUPERFAMILY SSF52777 155 368 9.78E-55 T 12-10-2018 PA257_1856 f06ea6b00ba6ef8a56e25c625ff8fbf6 370 Gene3D G3DSA:2.40.50.100 2 79 8.3E-23 T 12-10-2018 PA257_1856 f06ea6b00ba6ef8a56e25c625ff8fbf6 370 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 163 369 6.0E-47 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 PA257_1856 f06ea6b00ba6ef8a56e25c625ff8fbf6 370 Pfam PF00364 Biotin-requiring enzyme 3 73 1.6E-19 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_1856 f06ea6b00ba6ef8a56e25c625ff8fbf6 370 SUPERFAMILY SSF51230 2 84 1.44E-24 T 12-10-2018 IPR011053 Single hybrid motif PA257_1856 f06ea6b00ba6ef8a56e25c625ff8fbf6 370 Gene3D G3DSA:3.30.559.10 165 370 7.8E-51 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PA257_1856 f06ea6b00ba6ef8a56e25c625ff8fbf6 370 Pfam PF02817 e3 binding domain 115 149 2.6E-13 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 PA257_1856 f06ea6b00ba6ef8a56e25c625ff8fbf6 370 SUPERFAMILY SSF47005 112 153 8.5E-10 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PA257_5519 c0b82c26858270dedeab9e498ba386cd 79 Gene3D G3DSA:3.30.300.90 1 79 1.9E-23 T 12-10-2018 PA257_5519 c0b82c26858270dedeab9e498ba386cd 79 Pfam PF01722 BolA-like protein 22 70 9.5E-8 T 12-10-2018 IPR002634 BolA protein PA257_5519 c0b82c26858270dedeab9e498ba386cd 79 SUPERFAMILY SSF82657 1 78 1.22E-21 T 12-10-2018 IPR036065 BolA-like superfamily PA257_5519 c0b82c26858270dedeab9e498ba386cd 79 PIRSF PIRSF003113 1 79 7.1E-16 T 12-10-2018 IPR002634 BolA protein PA257_5012 331d11dac7fddef80b58f05229102e4f 160 PIRSF PIRSF000303 1 160 1.9E-60 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_5012 331d11dac7fddef80b58f05229102e4f 160 Gene3D G3DSA:3.40.30.10 1 160 6.3E-59 T 12-10-2018 PA257_5012 331d11dac7fddef80b58f05229102e4f 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 PA257_5012 331d11dac7fddef80b58f05229102e4f 160 Pfam PF00255 Glutathione peroxidase 4 110 3.9E-38 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_5012 331d11dac7fddef80b58f05229102e4f 160 PRINTS PR01011 Glutathione peroxidase family signature 121 130 2.0E-19 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_5012 331d11dac7fddef80b58f05229102e4f 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 2.0E-19 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_5012 331d11dac7fddef80b58f05229102e4f 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 2.0E-19 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PA257_5012 331d11dac7fddef80b58f05229102e4f 160 SUPERFAMILY SSF52833 4 159 7.97E-57 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_6795 ea98099ef9d51e3ee1dc4cc37ebc6f89 410 Pfam PF01012 Electron transfer flavoprotein domain 101 244 2.8E-15 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PA257_6795 ea98099ef9d51e3ee1dc4cc37ebc6f89 410 SMART SM00893 95 269 8.9E-5 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PA257_6795 ea98099ef9d51e3ee1dc4cc37ebc6f89 410 Gene3D G3DSA:3.40.50.620 94 219 2.8E-14 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_6795 ea98099ef9d51e3ee1dc4cc37ebc6f89 410 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 283 358 4.6E-24 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 PA257_6795 ea98099ef9d51e3ee1dc4cc37ebc6f89 410 PIRSF PIRSF000089 92 403 6.9E-69 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 PA257_6795 ea98099ef9d51e3ee1dc4cc37ebc6f89 410 SUPERFAMILY SSF52467 281 396 2.17E-33 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_6795 ea98099ef9d51e3ee1dc4cc37ebc6f89 410 SUPERFAMILY SSF52402 95 219 3.45E-19 T 12-10-2018 PA257_6795 ea98099ef9d51e3ee1dc4cc37ebc6f89 410 Gene3D G3DSA:3.40.50.1220 276 408 2.8E-37 T 12-10-2018 PA257_1511 773da7c8d99027c18e4e841c1256cc0e 557 SUPERFAMILY SSF51905 7 535 3.4E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1511 773da7c8d99027c18e4e841c1256cc0e 557 Gene3D G3DSA:3.30.560.10 46 471 2.5E-167 T 12-10-2018 PA257_1511 773da7c8d99027c18e4e841c1256cc0e 557 Pfam PF00732 GMC oxidoreductase 8 298 3.1E-76 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_1511 773da7c8d99027c18e4e841c1256cc0e 557 SUPERFAMILY SSF54373 293 476 2.06E-58 T 12-10-2018 PA257_1511 773da7c8d99027c18e4e841c1256cc0e 557 PIRSF PIRSF000137 3 541 7.5E-146 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_1511 773da7c8d99027c18e4e841c1256cc0e 557 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 257 271 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_1511 773da7c8d99027c18e4e841c1256cc0e 557 Gene3D G3DSA:3.50.50.60 9 524 2.5E-167 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1511 773da7c8d99027c18e4e841c1256cc0e 557 Pfam PF05199 GMC oxidoreductase 390 526 6.1E-39 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PA257_3230 43f5b977e7b97e588bd4076e02ad74c9 305 Gene3D G3DSA:3.40.50.1980 137 198 3.0E-5 T 12-10-2018 PA257_3230 43f5b977e7b97e588bd4076e02ad74c9 305 Pfam PF01297 Zinc-uptake complex component A periplasmic 85 284 2.2E-13 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PA257_3230 43f5b977e7b97e588bd4076e02ad74c9 305 SUPERFAMILY SSF53807 35 300 5.4E-31 T 12-10-2018 PA257_3555 166893e342d8fa0a59e84184e5057662 156 Gene3D G3DSA:1.20.120.520 1 146 4.5E-18 T 12-10-2018 PA257_3555 166893e342d8fa0a59e84184e5057662 156 Pfam PF01814 Hemerythrin HHE cation binding domain 3 124 7.3E-18 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 PA257_1552 6ae95e50392e82721d27c5afd9d0770a 326 Pfam PF14238 Domain of unknown function (DUF4340) 72 246 1.3E-17 T 12-10-2018 IPR025641 Domain of unknown function DUF4340 PA257_5230 a97ff918c6ce60e621281c2f05c3c4af 315 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 29 313 5.7E-131 T 12-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 PA257_5230 a97ff918c6ce60e621281c2f05c3c4af 315 Pfam PF06834 TraU protein 37 303 2.9E-73 T 12-10-2018 IPR009649 TraU PA257_0592 fa2c81def30fd5182ee6d24ab43fd043 733 Pfam PF12805 FUSC-like inner membrane protein yccS 71 354 3.6E-114 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal PA257_0592 fa2c81def30fd5182ee6d24ab43fd043 733 Pfam PF13515 Fusaric acid resistance protein-like 412 529 2.1E-21 T 12-10-2018 PA257_0592 fa2c81def30fd5182ee6d24ab43fd043 733 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 14 715 4.0E-235 T 12-10-2018 IPR010019 Integral membrane protein, YccS PA257_0592 fa2c81def30fd5182ee6d24ab43fd043 733 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 717 0.0 T 12-10-2018 IPR010020 Integral membrane protein, YccS/YhfK PA257_2599 0009a405060531cc5855dd0d3e992971 57 SUPERFAMILY SSF46689 11 48 3.4E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_3120 d3625b61715cd3eec78bed9aa6f64bd5 283 Pfam PF13649 Methyltransferase domain 55 151 3.7E-11 T 12-10-2018 PA257_3120 d3625b61715cd3eec78bed9aa6f64bd5 283 SUPERFAMILY SSF53335 31 248 4.3E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_3120 d3625b61715cd3eec78bed9aa6f64bd5 283 Gene3D G3DSA:3.40.50.150 37 247 6.8E-31 T 12-10-2018 PA257_1888 c262e2ba9ae710c86af2bfb531827c04 108 SUPERFAMILY SSF47598 14 59 1.04E-13 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PA257_1888 c262e2ba9ae710c86af2bfb531827c04 108 Gene3D G3DSA:1.10.1220.10 1 66 2.3E-35 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PA257_1888 c262e2ba9ae710c86af2bfb531827c04 108 Pfam PF03869 Arc-like DNA binding domain 13 62 1.4E-28 T 12-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 PA257_2615 269a52d8032f0e46870892618ff06636 759 Gene3D G3DSA:3.40.50.300 64 179 5.2E-8 T 12-10-2018 PA257_2615 269a52d8032f0e46870892618ff06636 759 Pfam PF00271 Helicase conserved C-terminal domain 585 695 4.3E-6 T 12-10-2018 IPR001650 Helicase, C-terminal PA257_2615 269a52d8032f0e46870892618ff06636 759 Gene3D G3DSA:3.40.50.300 495 749 1.4E-23 T 12-10-2018 PA257_2615 269a52d8032f0e46870892618ff06636 759 SUPERFAMILY SSF52540 68 411 6.81E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2615 269a52d8032f0e46870892618ff06636 759 SUPERFAMILY SSF52540 351 736 4.18E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2615 269a52d8032f0e46870892618ff06636 759 SMART SM00487 69 413 3.2E-10 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PA257_2615 269a52d8032f0e46870892618ff06636 759 Gene3D G3DSA:3.40.50.10810 312 454 1.9E-6 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PA257_2166 5116dea1729aedca1c877166ec120c83 145 SUPERFAMILY SSF54637 3 139 2.8E-39 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_2166 5116dea1729aedca1c877166ec120c83 145 Gene3D G3DSA:3.10.129.10 5 138 6.9E-33 T 12-10-2018 PA257_2166 5116dea1729aedca1c877166ec120c83 145 Pfam PF13279 Thioesterase-like superfamily 15 134 3.1E-12 T 12-10-2018 PA257_4601 c1c1817dc612b22a1d22826bca3c5ecf 315 Pfam PF05726 Pirin C-terminal cupin domain 191 288 3.4E-23 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 PA257_4601 c1c1817dc612b22a1d22826bca3c5ecf 315 Gene3D G3DSA:2.60.120.10 19 264 4.4E-63 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4601 c1c1817dc612b22a1d22826bca3c5ecf 315 SUPERFAMILY SSF51182 25 297 5.44E-70 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4601 c1c1817dc612b22a1d22826bca3c5ecf 315 Pfam PF02678 Pirin 40 139 1.8E-30 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 PA257_4601 c1c1817dc612b22a1d22826bca3c5ecf 315 PIRSF PIRSF006232 19 300 3.4E-81 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 PA257_4451 bf8ddda57a24b61f417d911a5c01880e 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 269 7.5E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_4451 bf8ddda57a24b61f417d911a5c01880e 302 SUPERFAMILY SSF53850 8 272 4.15E-64 T 12-10-2018 PA257_4451 bf8ddda57a24b61f417d911a5c01880e 302 Gene3D G3DSA:3.40.190.10 28 274 3.1E-100 T 12-10-2018 PA257_4451 bf8ddda57a24b61f417d911a5c01880e 302 SMART SM00062 38 271 1.1E-56 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_4451 bf8ddda57a24b61f417d911a5c01880e 302 Gene3D G3DSA:3.40.190.10 133 228 3.1E-100 T 12-10-2018 PA257_5699 f263f04a1fe41463cf50d78086c769d4 980 SUPERFAMILY SSF52540 492 906 1.39E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5699 f263f04a1fe41463cf50d78086c769d4 980 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 73 348 2.0E-68 T 12-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase PA257_5699 f263f04a1fe41463cf50d78086c769d4 980 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 62 961 0.0 T 12-10-2018 IPR022303 Conjugative transfer ATPase PA257_3978 61a3e6540a6532be613dffa9f9ffc506 443 Pfam PF01145 SPFH domain / Band 7 family 33 287 1.4E-38 T 12-10-2018 IPR001107 Band 7 domain PA257_0786 4b5237f9907f2f6750c9cc80a66d93f1 278 Gene3D G3DSA:3.20.20.70 2 268 3.3E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0786 4b5237f9907f2f6750c9cc80a66d93f1 278 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 5 265 36.629 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 PA257_0786 4b5237f9907f2f6750c9cc80a66d93f1 278 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 263 4.5E-101 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 PA257_0786 4b5237f9907f2f6750c9cc80a66d93f1 278 SUPERFAMILY SSF51366 14 265 2.0E-86 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PA257_0786 4b5237f9907f2f6750c9cc80a66d93f1 278 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 58 76 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 PA257_2523 6057cdfcaaa5cb0c0a80d40319466701 77 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 77 6.3E-32 T 12-10-2018 IPR021676 Protein of unknown function DUF3262 PA257_2523 6057cdfcaaa5cb0c0a80d40319466701 77 Pfam PF11660 Protein of unknown function (DUF3262) 1 76 4.6E-26 T 12-10-2018 IPR021676 Protein of unknown function DUF3262 PA257_4572 fcd87624cecd2fde25c72e0167dc1e2f 268 Pfam PF12833 Helix-turn-helix domain 183 260 2.3E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4572 fcd87624cecd2fde25c72e0167dc1e2f 268 SUPERFAMILY SSF51182 32 186 9.78E-14 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4572 fcd87624cecd2fde25c72e0167dc1e2f 268 Gene3D G3DSA:2.60.120.10 7 100 2.8E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4572 fcd87624cecd2fde25c72e0167dc1e2f 268 Gene3D G3DSA:1.10.10.60 161 266 4.0E-17 T 12-10-2018 PA257_4572 fcd87624cecd2fde25c72e0167dc1e2f 268 SMART SM00342 177 259 4.6E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_4572 fcd87624cecd2fde25c72e0167dc1e2f 268 SUPERFAMILY SSF46689 216 261 1.57E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_4572 fcd87624cecd2fde25c72e0167dc1e2f 268 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 214 255 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PA257_0604 fdaabba6ea53e527e781ffb2082019bb 452 PIRSF PIRSF004548 1 451 1.1E-178 T 12-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD PA257_0604 fdaabba6ea53e527e781ffb2082019bb 452 Pfam PF06123 Inner membrane protein CreD 5 438 5.2E-167 T 12-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD PA257_2088 9ced716585e844d7439375387a95e5d8 186 PIRSF PIRSF000232 1 186 1.1E-66 T 12-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like PA257_2088 9ced716585e844d7439375387a95e5d8 186 Pfam PF00881 Nitroreductase family 9 163 9.3E-24 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 PA257_2088 9ced716585e844d7439375387a95e5d8 186 SUPERFAMILY SSF55469 1 182 3.4E-39 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_2088 9ced716585e844d7439375387a95e5d8 186 Gene3D G3DSA:3.40.109.10 1 179 3.0E-39 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PA257_4066 b2929b46107efa60c40a70963188264e 390 Pfam PF04888 Secretion system effector C (SseC) like family 111 385 7.1E-54 T 12-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 PA257_2710 fd04c8043c5750f76e798853dc094b6b 136 Pfam PF13554 Bacteriophage related domain of unknown function 6 131 2.0E-28 T 12-10-2018 IPR025395 Protein of unknown function DUF4128 PA257_2710 fd04c8043c5750f76e798853dc094b6b 136 Gene3D G3DSA:3.30.2000.20 1 136 8.4E-42 T 12-10-2018 PA257_5273 0e9493ce04a0900c5862bab7272c47ca 836 Pfam PF00082 Subtilase family 289 622 9.3E-37 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PA257_5273 0e9493ce04a0900c5862bab7272c47ca 836 PRINTS PR00723 Subtilisin serine protease family (S8) signature 324 337 1.1E-5 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related PA257_5273 0e9493ce04a0900c5862bab7272c47ca 836 PRINTS PR00723 Subtilisin serine protease family (S8) signature 285 304 1.1E-5 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related PA257_5273 0e9493ce04a0900c5862bab7272c47ca 836 PRINTS PR00723 Subtilisin serine protease family (S8) signature 556 572 1.1E-5 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related PA257_5273 0e9493ce04a0900c5862bab7272c47ca 836 SUPERFAMILY SSF52743 270 637 1.02E-36 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 PA257_5273 0e9493ce04a0900c5862bab7272c47ca 836 Gene3D G3DSA:3.40.50.200 283 631 2.2E-29 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 PA257_2388 e324b52819dded35563a94d59ce59c81 389 Gene3D G3DSA:3.30.70.360 183 297 1.6E-135 T 12-10-2018 PA257_2388 e324b52819dded35563a94d59ce59c81 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 376 3.0E-108 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 PA257_2388 e324b52819dded35563a94d59ce59c81 389 SUPERFAMILY SSF55031 186 293 3.53E-29 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PA257_2388 e324b52819dded35563a94d59ce59c81 389 Gene3D G3DSA:3.40.630.10 17 373 1.6E-135 T 12-10-2018 PA257_2388 e324b52819dded35563a94d59ce59c81 389 SUPERFAMILY SSF53187 6 388 4.4E-90 T 12-10-2018 PA257_2388 e324b52819dded35563a94d59ce59c81 389 Pfam PF01546 Peptidase family M20/M25/M40 75 385 8.9E-35 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 PA257_2388 e324b52819dded35563a94d59ce59c81 389 Pfam PF07687 Peptidase dimerisation domain 187 280 2.5E-8 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain PA257_2388 e324b52819dded35563a94d59ce59c81 389 PIRSF PIRSF005962 3 389 6.1E-126 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 PA257_2834 7c58b5a7e86d7bd82ad216258e158262 159 Gene3D G3DSA:1.10.10.10 2 158 1.7E-54 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2834 7c58b5a7e86d7bd82ad216258e158262 159 Pfam PF01638 HxlR-like helix-turn-helix 19 106 7.4E-25 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type PA257_2834 7c58b5a7e86d7bd82ad216258e158262 159 SUPERFAMILY SSF46785 7 145 4.59E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1324 796bca554ff1fc0c14841845162fa2e8 159 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 9 158 1.6E-24 T 12-10-2018 IPR018681 Protein of unknown function DUF2165, transmembrane PA257_1908 5605432c01009b0de177a3866dff1899 346 Pfam PF00795 Carbon-nitrogen hydrolase 15 267 9.4E-54 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PA257_1908 5605432c01009b0de177a3866dff1899 346 Hamap MF_01242 Aliphatic amidase [amiE]. 1 340 87.899 T 12-10-2018 IPR023719 Aliphatic amidase GO:0004040 KEGG: 00330+3.5.1.4|KEGG: 00360+3.5.1.4|KEGG: 00380+3.5.1.4|KEGG: 00627+3.5.1.4|KEGG: 00643+3.5.1.4|MetaCyc: PWY-3161|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PA257_1908 5605432c01009b0de177a3866dff1899 346 Gene3D G3DSA:3.60.110.10 1 341 7.2E-162 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_1908 5605432c01009b0de177a3866dff1899 346 SUPERFAMILY SSF56317 11 275 8.63E-57 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_1913 3c51bf3197c1a3a9e17ef323cfa391f2 115 Gene3D G3DSA:2.60.120.400 2 115 1.2E-45 T 12-10-2018 IPR036684 Calcium-mediated lectin superfamily PA257_1913 3c51bf3197c1a3a9e17ef323cfa391f2 115 Pfam PF07472 Fucose-binding lectin II (PA-IIL) 7 114 2.7E-42 T 12-10-2018 IPR010907 Calcium-mediated lectin PA257_1913 3c51bf3197c1a3a9e17ef323cfa391f2 115 SUPERFAMILY SSF82026 3 115 6.28E-43 T 12-10-2018 IPR036684 Calcium-mediated lectin superfamily PA257_6006 e80d2870679ddcbef02bbe88ff4c5e42 187 Pfam PF06252 Protein of unknown function (DUF1018) 20 131 1.6E-20 T 12-10-2018 IPR009363 Bacteriophage Mu, Gp16 PA257_3313 af77637df312c178fe39d59e289140bf 399 Gene3D G3DSA:3.40.190.10 159 386 7.1E-41 T 12-10-2018 PA257_3313 af77637df312c178fe39d59e289140bf 399 Gene3D G3DSA:3.40.190.10 40 123 4.1E-15 T 12-10-2018 PA257_3313 af77637df312c178fe39d59e289140bf 399 Pfam PF13379 NMT1-like family 38 279 4.1E-44 T 12-10-2018 PA257_3313 af77637df312c178fe39d59e289140bf 399 SUPERFAMILY SSF53213 285 359 5.49E-5 T 12-10-2018 PA257_3313 af77637df312c178fe39d59e289140bf 399 SUPERFAMILY SSF53850 42 276 8.54E-35 T 12-10-2018 PA257_4109 9dc499cffac87fe82dab4205933f7a35 168 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 154 1.2E-46 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN PA257_4109 9dc499cffac87fe82dab4205933f7a35 168 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 20 151 3.6E-42 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN PA257_4109 9dc499cffac87fe82dab4205933f7a35 168 Gene3D G3DSA:2.60.40.4150 33 158 4.1E-40 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily PA257_6385 e7a0599bd2c2f32c6922533871ceeb49 276 SMART SM00382 57 245 3.8E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6385 e7a0599bd2c2f32c6922533871ceeb49 276 Pfam PF00005 ABC transporter 49 196 4.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6385 e7a0599bd2c2f32c6922533871ceeb49 276 SUPERFAMILY SSF52540 47 270 1.61E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6385 e7a0599bd2c2f32c6922533871ceeb49 276 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 41 271 2.7E-109 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PA257_6385 e7a0599bd2c2f32c6922533871ceeb49 276 Gene3D G3DSA:3.40.50.300 40 275 7.4E-75 T 12-10-2018 PA257_6385 e7a0599bd2c2f32c6922533871ceeb49 276 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_0311 6ecf8311f8423fbd2c3c1e3f1582b200 144 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 6.6E-55 T 12-10-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 PA257_0311 6ecf8311f8423fbd2c3c1e3f1582b200 144 SUPERFAMILY SSF46955 8 130 1.54E-29 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_0311 6ecf8311f8423fbd2c3c1e3f1582b200 144 SMART SM00422 8 77 1.1E-29 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0311 6ecf8311f8423fbd2c3c1e3f1582b200 144 Pfam PF09278 MerR, DNA binding 51 113 4.1E-18 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding PA257_0311 6ecf8311f8423fbd2c3c1e3f1582b200 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 3.6E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0311 6ecf8311f8423fbd2c3c1e3f1582b200 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 3.6E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0311 6ecf8311f8423fbd2c3c1e3f1582b200 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 3.6E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0311 6ecf8311f8423fbd2c3c1e3f1582b200 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0311 6ecf8311f8423fbd2c3c1e3f1582b200 144 Gene3D G3DSA:1.10.1660.10 1 131 1.5E-32 T 12-10-2018 PA257_0311 6ecf8311f8423fbd2c3c1e3f1582b200 144 Pfam PF00376 MerR family regulatory protein 9 46 1.0E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_1635 b9fea9d12611199400d1d46b91961afd 74 Pfam PF04965 Gene 25-like lysozyme 1 48 4.7E-10 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD PA257_1635 b9fea9d12611199400d1d46b91961afd 74 Gene3D G3DSA:3.10.450.40 1 66 8.6E-12 T 12-10-2018 PA257_1635 b9fea9d12611199400d1d46b91961afd 74 SUPERFAMILY SSF160719 1 71 5.62E-16 T 12-10-2018 PA257_1139 b2e206ea47d3d70851130c44b908f974 120 Pfam PF03788 LrgA family 13 106 1.5E-20 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 PA257_4136 fb5856cd480c013d3b446b492a391e4a 135 Gene3D G3DSA:2.30.30.900 20 135 4.4E-52 T 12-10-2018 PA257_4136 fb5856cd480c013d3b446b492a391e4a 135 Pfam PF16985 Domain of unknown function (DUF5086) 5 133 3.3E-61 T 12-10-2018 IPR031561 Protein of unknown function DUF5086 PA257_0346 f32c298990118010e9c90480e2c0a2c0 272 SUPERFAMILY SSF161098 15 267 1.7E-56 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0346 f32c298990118010e9c90480e2c0a2c0 272 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 270 2.6E-128 T 12-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 PA257_0346 f32c298990118010e9c90480e2c0a2c0 272 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 268 2.1E-93 T 12-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 PA257_0346 f32c298990118010e9c90480e2c0a2c0 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 270 2.5E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0346 f32c298990118010e9c90480e2c0a2c0 272 Gene3D G3DSA:1.10.3720.10 13 271 4.9E-67 T 12-10-2018 IPR035906 MetI-like superfamily PA257_4016 9acc0f9567e4d0e4da55c0833a7a9dfb 205 Pfam PF12710 haloacid dehalogenase-like hydrolase 64 160 8.6E-10 T 12-10-2018 PA257_4016 9acc0f9567e4d0e4da55c0833a7a9dfb 205 SUPERFAMILY SSF56784 2 191 1.15E-44 T 12-10-2018 IPR036412 HAD-like superfamily PA257_4016 9acc0f9567e4d0e4da55c0833a7a9dfb 205 Gene3D G3DSA:3.90.1470.10 13 128 4.2E-85 T 12-10-2018 PA257_4016 9acc0f9567e4d0e4da55c0833a7a9dfb 205 Gene3D G3DSA:3.40.50.1000 3 191 4.2E-85 T 12-10-2018 IPR023214 HAD superfamily PA257_4016 9acc0f9567e4d0e4da55c0833a7a9dfb 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 2 203 4.2E-125 T 12-10-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 PA257_5902 bf563031fb8d31d537254b390602cd10 337 Pfam PF00174 Oxidoreductase molybdopterin binding domain 114 271 7.9E-31 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PA257_5902 bf563031fb8d31d537254b390602cd10 337 Gene3D G3DSA:3.90.420.10 71 337 4.1E-107 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_5902 bf563031fb8d31d537254b390602cd10 337 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 3 337 55.392 T 12-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 PA257_5902 bf563031fb8d31d537254b390602cd10 337 SUPERFAMILY SSF56524 83 333 7.06E-92 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_6568 af7c0ee738cf3554e2f74afff9e2c73a 539 Gene3D G3DSA:1.10.3720.10 9 263 1.3E-54 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6568 af7c0ee738cf3554e2f74afff9e2c73a 539 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 8.2E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_6568 af7c0ee738cf3554e2f74afff9e2c73a 539 SUPERFAMILY SSF161098 8 252 5.45E-46 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6568 af7c0ee738cf3554e2f74afff9e2c73a 539 Gene3D G3DSA:1.10.3720.10 280 537 2.9E-30 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6568 af7c0ee738cf3554e2f74afff9e2c73a 539 SUPERFAMILY SSF161098 281 531 3.79E-34 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5936 0e7c1ab49f2658f52944309cbfb9f33f 148 Gene3D G3DSA:1.20.120.910 17 147 1.0E-36 T 12-10-2018 PA257_5936 0e7c1ab49f2658f52944309cbfb9f33f 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 7.6E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PA257_5936 0e7c1ab49f2658f52944309cbfb9f33f 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 7.6E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PA257_5936 0e7c1ab49f2658f52944309cbfb9f33f 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PA257_5936 0e7c1ab49f2658f52944309cbfb9f33f 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 7.6E-52 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PA257_5936 0e7c1ab49f2658f52944309cbfb9f33f 148 SUPERFAMILY SSF57716 108 145 2.71E-10 T 12-10-2018 PA257_5936 0e7c1ab49f2658f52944309cbfb9f33f 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.0E-11 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PA257_5936 0e7c1ab49f2658f52944309cbfb9f33f 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 31.087 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PA257_5936 0e7c1ab49f2658f52944309cbfb9f33f 148 SUPERFAMILY SSF109635 11 106 6.8E-34 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily PA257_4466 2252dbe268b5343a1cbbb2ada78c019f 138 SUPERFAMILY SSF143744 3 134 1.57E-34 T 12-10-2018 IPR038084 GlcG-like domain superfamily PA257_4466 2252dbe268b5343a1cbbb2ada78c019f 138 Pfam PF03928 Haem-degrading 5 131 3.4E-30 T 12-10-2018 IPR005624 Haem-degrading PA257_4466 2252dbe268b5343a1cbbb2ada78c019f 138 Gene3D G3DSA:3.30.450.150 1 137 9.7E-43 T 12-10-2018 IPR038084 GlcG-like domain superfamily PA257_2383 ea4f5bd223cedbbed59490f7632cb92f 60 SUPERFAMILY SSF55729 2 48 6.25E-5 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_2383 ea4f5bd223cedbbed59490f7632cb92f 60 Gene3D G3DSA:3.40.630.30 1 55 3.9E-9 T 12-10-2018 PA257_5879 adcdc37346100db5f9d39e883bc36f1f 215 SMART SM00947 30 193 3.6E-65 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_5879 adcdc37346100db5f9d39e883bc36f1f 215 Pfam PF00484 Carbonic anhydrase 37 187 7.5E-50 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_5879 adcdc37346100db5f9d39e883bc36f1f 215 SUPERFAMILY SSF53056 1 202 4.32E-73 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 PA257_5879 adcdc37346100db5f9d39e883bc36f1f 215 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PA257_5879 adcdc37346100db5f9d39e883bc36f1f 215 Gene3D G3DSA:3.40.1050.10 3 211 1.4E-84 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 PA257_3600 9f9febada229867738199695dce33a03 453 Gene3D G3DSA:2.60.40.1090 273 451 3.2E-6 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 PA257_3600 9f9febada229867738199695dce33a03 453 Pfam PF00419 Fimbrial protein 268 453 9.2E-28 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PA257_3600 9f9febada229867738199695dce33a03 453 PIRSF PIRSF029766 7 453 7.7E-199 T 12-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 PA257_3600 9f9febada229867738199695dce33a03 453 SUPERFAMILY SSF49401 274 451 9.11E-9 T 12-10-2018 IPR008966 Adhesion domain superfamily PA257_6664 98d2dd1fd06ba728e602ca1b8ac581a6 97 Gene3D G3DSA:1.10.10.60 9 89 6.4E-10 T 12-10-2018 PA257_6664 98d2dd1fd06ba728e602ca1b8ac581a6 97 Pfam PF01527 Transposase 3 76 1.9E-15 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_6664 98d2dd1fd06ba728e602ca1b8ac581a6 97 SUPERFAMILY SSF46689 4 94 1.29E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2537 0cee75b7a92bce943249e729fb9e4837 183 Gene3D G3DSA:3.20.20.70 1 183 6.6E-70 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2537 0cee75b7a92bce943249e729fb9e4837 183 SUPERFAMILY SSF51569 2 182 3.66E-54 T 12-10-2018 PA257_0756 66d94483da397e4f92f50c44fae48e39 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 4.6E-99 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PA257_0756 66d94483da397e4f92f50c44fae48e39 224 SUPERFAMILY SSF51366 4 217 7.85E-76 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PA257_0756 66d94483da397e4f92f50c44fae48e39 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PA257_0756 66d94483da397e4f92f50c44fae48e39 224 Gene3D G3DSA:3.20.20.70 4 221 2.2E-84 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0756 66d94483da397e4f92f50c44fae48e39 224 PIRSF PIRSF001461 1 224 7.7E-103 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PA257_0756 66d94483da397e4f92f50c44fae48e39 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 3.9E-89 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PA257_0756 66d94483da397e4f92f50c44fae48e39 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PA257_1469 6b75468705f289bbeee7b10da292e032 437 Pfam PF00083 Sugar (and other) transporter 23 232 2.7E-24 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PA257_1469 6b75468705f289bbeee7b10da292e032 437 Pfam PF00083 Sugar (and other) transporter 234 429 3.7E-13 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PA257_1469 6b75468705f289bbeee7b10da292e032 437 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 28 419 1.0E-135 T 12-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 PA257_1469 6b75468705f289bbeee7b10da292e032 437 SUPERFAMILY SSF103473 18 432 1.31E-64 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1469 6b75468705f289bbeee7b10da292e032 437 Gene3D G3DSA:1.20.1250.20 18 437 3.6E-69 T 12-10-2018 PA257_1469 6b75468705f289bbeee7b10da292e032 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 302 319 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_3240 adb4d4294b4f5159b13e468354b2ab8a 321 SUPERFAMILY SSF53474 43 315 1.62E-73 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3240 adb4d4294b4f5159b13e468354b2ab8a 321 Pfam PF07859 alpha/beta hydrolase fold 88 295 5.8E-70 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 PA257_3240 adb4d4294b4f5159b13e468354b2ab8a 321 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 88 104 - T 12-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 PA257_3240 adb4d4294b4f5159b13e468354b2ab8a 321 Gene3D G3DSA:3.40.50.1820 2 320 6.4E-90 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4531 05e5ca2d56306e035124a4d2d0a9e037 371 SUPERFAMILY SSF51905 4 363 1.15E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4531 05e5ca2d56306e035124a4d2d0a9e037 371 Gene3D G3DSA:3.30.9.10 81 304 2.5E-73 T 12-10-2018 PA257_4531 05e5ca2d56306e035124a4d2d0a9e037 371 SUPERFAMILY SSF54373 204 304 4.58E-12 T 12-10-2018 PA257_4531 05e5ca2d56306e035124a4d2d0a9e037 371 Pfam PF01266 FAD dependent oxidoreductase 5 343 3.4E-59 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_4531 05e5ca2d56306e035124a4d2d0a9e037 371 Gene3D G3DSA:3.50.50.60 5 343 2.5E-73 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6880 dbbbbf124553b6f914ac8488d6bd1bbe 409 PIRSF PIRSF036542 1 409 1.2E-206 T 12-10-2018 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB PA257_6880 dbbbbf124553b6f914ac8488d6bd1bbe 409 Pfam PF07670 Nucleoside recognition 52 157 1.1E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PA257_3248 27faddb95b7ab6af4b1cd6447724d9a1 548 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 21 5.5E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PA257_3248 27faddb95b7ab6af4b1cd6447724d9a1 548 SUPERFAMILY SSF48056 254 448 1.01E-7 T 12-10-2018 IPR008922 Uncharacterised domain, di-copper centre Reactome: R-HSA-5662702 PA257_0043 1d0db0760aea54d3d05f1a3a9deb1e49 121 Gene3D G3DSA:1.20.120.160 1 114 3.7E-15 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_0043 1d0db0760aea54d3d05f1a3a9deb1e49 121 Pfam PF01627 Hpt domain 24 99 4.2E-9 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_0043 1d0db0760aea54d3d05f1a3a9deb1e49 121 SUPERFAMILY SSF47226 9 111 1.19E-15 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_2785 4f93a907d0617b14eab71c163b90c44b 147 Pfam PF09335 SNARE associated Golgi protein 30 141 6.7E-14 T 12-10-2018 IPR032816 SNARE associated Golgi protein PA257_2785 4f93a907d0617b14eab71c163b90c44b 147 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 8 117 8.0E-7 T 12-10-2018 IPR020143 Uncharacterised protein family, RP436 PA257_1954 81b45c4040d8ea6ef87b522f26c3366c 270 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 27 38 2.2E-6 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_1954 81b45c4040d8ea6ef87b522f26c3366c 270 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 61 81 2.2E-6 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_1954 81b45c4040d8ea6ef87b522f26c3366c 270 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 51 2.2E-6 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_1954 81b45c4040d8ea6ef87b522f26c3366c 270 SUPERFAMILY SSF46955 26 97 3.19E-15 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_1954 81b45c4040d8ea6ef87b522f26c3366c 270 Pfam PF13411 MerR HTH family regulatory protein 26 93 4.6E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_1954 81b45c4040d8ea6ef87b522f26c3366c 270 SMART SM00422 26 94 4.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PA257_0095 f59051079055cca55d9aed6104ace21b 242 SUPERFAMILY SSF81606 9 240 3.14E-58 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_0095 f59051079055cca55d9aed6104ace21b 242 Pfam PF13672 Protein phosphatase 2C 21 207 1.7E-11 T 12-10-2018 PA257_0095 f59051079055cca55d9aed6104ace21b 242 Gene3D G3DSA:3.60.40.10 4 241 8.9E-55 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_0095 f59051079055cca55d9aed6104ace21b 242 SMART SM00331 15 241 6.2E-28 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_0095 f59051079055cca55d9aed6104ace21b 242 SMART SM00332 6 239 3.0E-25 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PA257_3674 f7c6ec672c30eafb4873a17c00b3bc55 357 SUPERFAMILY SSF161098 120 334 1.7E-12 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3674 f7c6ec672c30eafb4873a17c00b3bc55 357 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 143 350 3.7E-33 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3674 f7c6ec672c30eafb4873a17c00b3bc55 357 Gene3D G3DSA:1.10.3720.10 113 345 3.6E-16 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5036 c3a0ce7b5bf8281b2a0928b7df184a77 142 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 3 134 1.1E-20 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component PA257_5036 c3a0ce7b5bf8281b2a0928b7df184a77 142 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 3 102 6.5E-8 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component PA257_0370 6a16a763926a27df7b16c4098fbdf5b5 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 262 1.1E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0370 6a16a763926a27df7b16c4098fbdf5b5 289 Gene3D G3DSA:1.10.3720.10 6 266 5.6E-45 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0370 6a16a763926a27df7b16c4098fbdf5b5 289 SUPERFAMILY SSF161098 3 261 3.36E-50 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1644 aa8cbed560ff6b42bb7b1f9f51a2866b 896 Pfam PF10145 Phage-related minor tail protein 297 496 6.8E-19 T 12-10-2018 IPR010090 Phage tail tape measure protein PA257_5085 775766fc139f03a0bfc1ea7bc93383ca 270 Pfam PF01844 HNH endonuclease 187 242 3.7E-6 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PA257_3870 f78103f1661d20f171982ab9c0141716 184 SMART SM00530 13 68 2.4E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_3870 f78103f1661d20f171982ab9c0141716 184 SUPERFAMILY SSF47413 9 66 5.63E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_3870 f78103f1661d20f171982ab9c0141716 184 SUPERFAMILY SSF55785 69 128 3.05E-5 T 12-10-2018 IPR035965 PAS domain superfamily PA257_3870 f78103f1661d20f171982ab9c0141716 184 Gene3D G3DSA:1.10.260.40 5 75 4.3E-9 T 12-10-2018 PA257_3870 f78103f1661d20f171982ab9c0141716 184 Pfam PF13560 Helix-turn-helix domain 10 67 3.2E-8 T 12-10-2018 PA257_3742 d63021373695b0226a672906401a7500 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 269 280 - T 12-10-2018 IPR020845 AMP-binding, conserved site PA257_3742 d63021373695b0226a672906401a7500 651 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 2 651 4.1E-278 T 12-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 PA257_3742 d63021373695b0226a672906401a7500 651 Gene3D G3DSA:3.30.300.30 524 646 2.3E-12 T 12-10-2018 PA257_3742 d63021373695b0226a672906401a7500 651 Pfam PF00501 AMP-binding enzyme 95 525 2.6E-43 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PA257_3742 d63021373695b0226a672906401a7500 651 SUPERFAMILY SSF56801 19 643 3.66E-128 T 12-10-2018 PA257_3742 d63021373695b0226a672906401a7500 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 36 91 6.1E-12 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 PA257_3742 d63021373695b0226a672906401a7500 651 Gene3D G3DSA:3.40.50.12780 71 521 4.8E-57 T 12-10-2018 PA257_1558 0b101ee26c576a813c77d6b4b5d52867 117 Pfam PF03692 Putative zinc- or iron-chelating domain 20 81 4.7E-10 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein PA257_1558 0b101ee26c576a813c77d6b4b5d52867 117 PIRSF PIRSF029611 1 117 1.2E-70 T 12-10-2018 IPR016928 Uncharacterised conserved protein UCP029611 PA257_4903 c0182ab5c2ee0f629858947c01e7290b 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 179 1.8E-61 T 12-10-2018 IPR018636 Protein of unknown function DUF2058 PA257_0823 82b085c3289986888f34905f67156a75 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 27.953 T 12-10-2018 IPR022973 Ribosomal protein L10 PA257_0823 82b085c3289986888f34905f67156a75 166 Pfam PF00466 Ribosomal protein L10 6 101 2.6E-26 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 PA257_0823 82b085c3289986888f34905f67156a75 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 12-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0823 82b085c3289986888f34905f67156a75 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 75 154 1.0E-5 T 12-10-2018 PA257_0823 82b085c3289986888f34905f67156a75 166 SUPERFAMILY SSF160369 4 160 2.35E-49 T 12-10-2018 PA257_0823 82b085c3289986888f34905f67156a75 166 Gene3D G3DSA:3.30.70.1730 1 124 3.5E-35 T 12-10-2018 PA257_0183 13115c6f1e24c0dc58aca2092cceba82 390 Gene3D G3DSA:2.40.420.20 297 367 8.2E-64 T 12-10-2018 PA257_0183 13115c6f1e24c0dc58aca2092cceba82 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 369 2.2E-69 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_0183 13115c6f1e24c0dc58aca2092cceba82 390 Gene3D G3DSA:2.40.50.100 74 220 8.2E-64 T 12-10-2018 PA257_0183 13115c6f1e24c0dc58aca2092cceba82 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 277 1.6E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_0183 13115c6f1e24c0dc58aca2092cceba82 390 Gene3D G3DSA:2.40.30.170 62 296 8.2E-64 T 12-10-2018 PA257_0183 13115c6f1e24c0dc58aca2092cceba82 390 SUPERFAMILY SSF111369 64 292 3.53E-25 T 12-10-2018 PA257_0183 13115c6f1e24c0dc58aca2092cceba82 390 Gene3D G3DSA:1.10.287.470 108 173 8.2E-64 T 12-10-2018 PA257_6966 d5d17b7cf27e1147c5e521aa62aee494 85 Pfam PF03899 ATP synthase I chain 1 64 1.9E-16 T 12-10-2018 IPR005598 ATP synthase protein I PA257_4689 8c96ec9bf6d23dbbcea50b89f368e19b 179 Hamap MF_00163 Peptide deformylase [def]. 1 172 27.944 T 12-10-2018 IPR023635 Peptide deformylase PA257_4689 8c96ec9bf6d23dbbcea50b89f368e19b 179 Gene3D G3DSA:3.90.45.10 1 179 9.8E-65 T 12-10-2018 IPR036821 Peptide deformylase superfamily PA257_4689 8c96ec9bf6d23dbbcea50b89f368e19b 179 Pfam PF01327 Polypeptide deformylase 3 160 1.1E-47 T 12-10-2018 IPR023635 Peptide deformylase PA257_4689 8c96ec9bf6d23dbbcea50b89f368e19b 179 PIRSF PIRSF004749 1 172 9.9E-48 T 12-10-2018 IPR023635 Peptide deformylase PA257_4689 8c96ec9bf6d23dbbcea50b89f368e19b 179 PRINTS PR01576 Peptide deformylase signature 111 129 1.5E-31 T 12-10-2018 IPR023635 Peptide deformylase PA257_4689 8c96ec9bf6d23dbbcea50b89f368e19b 179 PRINTS PR01576 Peptide deformylase signature 130 159 1.5E-31 T 12-10-2018 IPR023635 Peptide deformylase PA257_4689 8c96ec9bf6d23dbbcea50b89f368e19b 179 PRINTS PR01576 Peptide deformylase signature 99 110 1.5E-31 T 12-10-2018 IPR023635 Peptide deformylase PA257_4689 8c96ec9bf6d23dbbcea50b89f368e19b 179 PRINTS PR01576 Peptide deformylase signature 35 64 1.5E-31 T 12-10-2018 IPR023635 Peptide deformylase PA257_4689 8c96ec9bf6d23dbbcea50b89f368e19b 179 SUPERFAMILY SSF56420 1 167 2.62E-57 T 12-10-2018 IPR036821 Peptide deformylase superfamily PA257_4689 8c96ec9bf6d23dbbcea50b89f368e19b 179 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 6.7E-35 T 12-10-2018 IPR023635 Peptide deformylase PA257_3645 305e8fde696f7425b4cbd74a25ce7358 300 SUPERFAMILY SSF53474 4 295 4.59E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3645 305e8fde696f7425b4cbd74a25ce7358 300 PRINTS PR00412 Epoxide hydrolase signature 269 291 1.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_3645 305e8fde696f7425b4cbd74a25ce7358 300 PRINTS PR00412 Epoxide hydrolase signature 37 55 1.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_3645 305e8fde696f7425b4cbd74a25ce7358 300 PRINTS PR00412 Epoxide hydrolase signature 103 116 1.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_3645 305e8fde696f7425b4cbd74a25ce7358 300 PRINTS PR00412 Epoxide hydrolase signature 117 130 1.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 PA257_3645 305e8fde696f7425b4cbd74a25ce7358 300 Gene3D G3DSA:3.40.50.1820 1 300 5.7E-92 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3645 305e8fde696f7425b4cbd74a25ce7358 300 Pfam PF00561 alpha/beta hydrolase fold 31 145 3.8E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_6472 2016431b1a2cd4dbd08bb1bb35198912 153 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 10 141 1.5E-44 T 12-10-2018 IPR020000 Bacteriophage P2, LysB PA257_3721 2c0ea2fae519e7dd46bca4482cb70146 309 SUPERFAMILY SSF50956 11 304 2.75E-46 T 12-10-2018 PA257_3721 2c0ea2fae519e7dd46bca4482cb70146 309 Pfam PF06977 SdiA-regulated 51 302 8.6E-96 T 12-10-2018 IPR009722 SdiA-regulated PA257_4490 106cfaec7969c6f80029b25f3a08d723 257 Gene3D G3DSA:3.60.20.10 1 257 3.9E-107 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_4490 106cfaec7969c6f80029b25f3a08d723 257 Pfam PF13230 Glutamine amidotransferases class-II 1 254 7.0E-107 T 12-10-2018 IPR026869 Putative glutamine amidotransferase type 2 PA257_4490 106cfaec7969c6f80029b25f3a08d723 257 SUPERFAMILY SSF56235 2 251 8.93E-49 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_3350 10778d9df5cccb56c1df0d527bfbb538 93 Gene3D G3DSA:3.30.2020.30 1 92 1.3E-23 T 12-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 PA257_3350 10778d9df5cccb56c1df0d527bfbb538 93 Pfam PF06155 Protein of unknown function (DUF971) 13 90 2.5E-22 T 12-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 PA257_2217 4513a0d893a73e04f920e9f4793aaa5c 277 Pfam PF10977 Protein of unknown function (DUF2797) 40 273 2.8E-98 T 12-10-2018 IPR021246 Protein of unknown function DUF2797 PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 5.4E-73 T 12-10-2018 PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 SUPERFAMILY SSF51735 2 252 9.6E-84 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 Gene3D G3DSA:3.40.50.720 1 252 5.6E-87 T 12-10-2018 PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.0E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.0E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.0E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.0E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.0E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_4131 1f561e81c2bc52c4522c29555c06d10f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 Pfam PF13654 AAA domain 30 540 1.5E-179 T 12-10-2018 PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 Gene3D G3DSA:3.40.50.300 247 453 2.8E-56 T 12-10-2018 PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 Gene3D G3DSA:3.40.50.300 12 168 1.6E-30 T 12-10-2018 PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 SUPERFAMILY SSF54211 565 757 3.07E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 Gene3D G3DSA:3.30.230.10 543 784 5.2E-91 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 650 754 1.4E-7 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 6.1E-13 T 12-10-2018 PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 566 582 6.1E-13 T 12-10-2018 PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 647 666 6.1E-13 T 12-10-2018 PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 725 6.1E-13 T 12-10-2018 PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 66 85 6.1E-13 T 12-10-2018 PA257_5752 c1185b2a06250a978b9aea1cd905f424 817 SUPERFAMILY SSF52540 35 536 9.58E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3725 888c3625c0936528bc1504de3305187e 535 SUPERFAMILY SSF52096 237 517 5.97E-91 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_3725 888c3625c0936528bc1504de3305187e 535 SUPERFAMILY SSF52096 23 270 2.99E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_3725 888c3625c0936528bc1504de3305187e 535 Pfam PF01039 Carboxyl transferase domain 48 525 1.2E-155 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PA257_3725 888c3625c0936528bc1504de3305187e 535 Gene3D G3DSA:3.90.226.10 1 272 1.4E-102 T 12-10-2018 PA257_3725 888c3625c0936528bc1504de3305187e 535 Gene3D G3DSA:3.90.226.10 275 535 2.0E-105 T 12-10-2018 PA257_5414 ebe5f2f352ba7414878cfdc38dd2a3e0 251 SUPERFAMILY SSF55729 23 223 3.55E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_5414 ebe5f2f352ba7414878cfdc38dd2a3e0 251 Pfam PF13444 Acetyltransferase (GNAT) domain 33 133 1.0E-29 T 12-10-2018 PA257_5414 ebe5f2f352ba7414878cfdc38dd2a3e0 251 Gene3D G3DSA:3.40.630.30 16 184 5.7E-24 T 12-10-2018 PA257_1283 2891068abcb2a1361b39c59dc2ba74b5 249 SUPERFAMILY SSF53335 3 171 1.32E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_1283 2891068abcb2a1361b39c59dc2ba74b5 249 Gene3D G3DSA:1.10.10.2560 134 233 2.6E-77 T 12-10-2018 PA257_1283 2891068abcb2a1361b39c59dc2ba74b5 249 Pfam PF08241 Methyltransferase domain 41 128 1.5E-16 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PA257_1283 2891068abcb2a1361b39c59dc2ba74b5 249 Gene3D G3DSA:3.40.50.150 18 243 2.6E-77 T 12-10-2018 PA257_6609 0f05c9ffab36b3f85442b5e87841ad2f 209 Gene3D G3DSA:1.10.287.460 21 76 8.2E-8 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 PA257_6609 0f05c9ffab36b3f85442b5e87841ad2f 209 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 22 107 5.9E-6 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PA257_6609 0f05c9ffab36b3f85442b5e87841ad2f 209 Gene3D G3DSA:3.10.50.40 77 209 1.3E-30 T 12-10-2018 PA257_6609 0f05c9ffab36b3f85442b5e87841ad2f 209 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 127 206 1.6E-17 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PA257_6609 0f05c9ffab36b3f85442b5e87841ad2f 209 SUPERFAMILY SSF54534 22 208 4.32E-37 T 12-10-2018 PA257_1141 4ded22c348d9b3b047c87fb00ab5e786 197 SUPERFAMILY SSF88697 1 188 6.46E-45 T 12-10-2018 IPR015947 PUA-like superfamily PA257_1141 4ded22c348d9b3b047c87fb00ab5e786 197 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 2 188 8.6E-20 T 12-10-2018 IPR003111 Lon, substrate-binding domain PA257_1141 4ded22c348d9b3b047c87fb00ab5e786 197 Gene3D G3DSA:2.30.130.40 1 111 4.0E-37 T 12-10-2018 PA257_1141 4ded22c348d9b3b047c87fb00ab5e786 197 SMART SM00464 2 192 4.1E-9 T 12-10-2018 IPR003111 Lon, substrate-binding domain PA257_6892 4a1b744abf8d94a3c517682460a10160 97 Gene3D G3DSA:1.10.760.10 18 97 4.8E-29 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_6892 4a1b744abf8d94a3c517682460a10160 97 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 19 94 1.4E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_6892 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 84 95 1.5E-8 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6892 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 41 51 1.5E-8 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6892 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 30 41 1.5E-8 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6892 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 69 81 1.5E-8 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PA257_6892 4a1b744abf8d94a3c517682460a10160 97 SUPERFAMILY SSF46626 20 95 1.0E-16 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 446 1.9E-35 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 5.3E-30 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 5.3E-30 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 5.3E-30 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.3E-30 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 5.3E-30 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 Gene3D G3DSA:3.50.50.60 5 317 1.2E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 SUPERFAMILY SSF51905 1 358 1.94E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 Gene3D G3DSA:3.50.50.60 143 260 1.2E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 Gene3D G3DSA:3.30.390.30 337 451 8.0E-45 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 4.2E-70 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PIRSF PIRSF000350 1 444 7.1E-88 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 1.8E-68 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.8E-68 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.8E-68 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.8E-68 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.8E-68 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.8E-68 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 1.8E-68 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 1.8E-68 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 1.8E-68 T 12-10-2018 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 SUPERFAMILY SSF55424 335 447 3.95E-36 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PA257_3712 1f86c94a4ded301abbe3f1a47ba5cafe 451 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 3 447 2.5E-183 T 12-10-2018 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 PA257_6289 9cf78a7b96c7924d90b99a90f4795f28 330 Gene3D G3DSA:3.40.50.2000 48 297 2.4E-6 T 12-10-2018 PA257_6289 9cf78a7b96c7924d90b99a90f4795f28 330 Pfam PF13524 Glycosyl transferases group 1 224 299 2.6E-8 T 12-10-2018 PA257_6289 9cf78a7b96c7924d90b99a90f4795f28 330 SUPERFAMILY SSF53756 57 307 1.19E-9 T 12-10-2018 PA257_1275 808a1f3f26d271dfa81360f428dec77e 311 Gene3D G3DSA:3.40.190.10 28 299 2.1E-90 T 12-10-2018 PA257_1275 808a1f3f26d271dfa81360f428dec77e 311 Gene3D G3DSA:3.40.190.120 124 238 2.1E-90 T 12-10-2018 PA257_1275 808a1f3f26d271dfa81360f428dec77e 311 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 25 296 3.2E-68 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PA257_1275 808a1f3f26d271dfa81360f428dec77e 311 SUPERFAMILY SSF53850 25 299 9.06E-69 T 12-10-2018 PA257_2149 7f80f98b3a38bbf2e7c0212ebff05d6e 227 SUPERFAMILY SSF51735 1 224 2.53E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2149 7f80f98b3a38bbf2e7c0212ebff05d6e 227 Gene3D G3DSA:3.40.50.720 1 218 1.5E-38 T 12-10-2018 PA257_2149 7f80f98b3a38bbf2e7c0212ebff05d6e 227 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 134 5.0E-12 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PA257_1227 19b5839ab3153430c29cd405e1c61df4 488 PIRSF PIRSF006446 2 464 1.4E-233 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 PA257_1227 19b5839ab3153430c29cd405e1c61df4 488 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 439 1.8E-168 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 PA257_2886 1d1b7be7cd6f8c35ee81d0cfcf558547 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 2 94 2.0E-34 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 PA257_2886 1d1b7be7cd6f8c35ee81d0cfcf558547 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 117 1.1E-38 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 PA257_2886 1d1b7be7cd6f8c35ee81d0cfcf558547 118 Gene3D G3DSA:3.30.479.10 1 118 5.4E-51 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 PA257_2886 1d1b7be7cd6f8c35ee81d0cfcf558547 118 PIRSF PIRSF006113 1 118 1.8E-51 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 PA257_2886 1d1b7be7cd6f8c35ee81d0cfcf558547 118 SUPERFAMILY SSF55620 2 117 5.34E-43 T 12-10-2018 PA257_4930 ea0204fbbbfb4561af4f67f6398fa9d9 171 Pfam PF13511 Domain of unknown function (DUF4124) 8 57 5.6E-10 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 PA257_5145 f6fa5e1313115d5aee99b1fe68e7195b 316 Pfam PF03888 MucB/RseB N-terminal domain 23 194 9.4E-56 T 12-10-2018 IPR033434 MucB/RseB, N-terminal PA257_5145 f6fa5e1313115d5aee99b1fe68e7195b 316 Gene3D G3DSA:3.30.200.100 210 314 1.3E-23 T 12-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily PA257_5145 f6fa5e1313115d5aee99b1fe68e7195b 316 PIRSF PIRSF005427 1 315 9.8E-98 T 12-10-2018 IPR005588 MucB/RseB PA257_5145 f6fa5e1313115d5aee99b1fe68e7195b 316 Pfam PF17188 MucB/RseB C-terminal domain 210 309 8.0E-24 T 12-10-2018 IPR033436 MucB/RseB, C-terminal PA257_5145 f6fa5e1313115d5aee99b1fe68e7195b 316 Gene3D G3DSA:2.50.20.10 21 198 1.8E-51 T 12-10-2018 PA257_4348 95e2f68a34a36c6cfd233e206404abf4 150 Pfam PF04347 Flagellar biosynthesis protein, FliO 63 142 1.1E-19 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PA257_4348 95e2f68a34a36c6cfd233e206404abf4 150 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 51 118 1.9E-22 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PA257_4500 d36046b22c996d172d76084d11bce7a3 320 SUPERFAMILY SSF161111 22 241 5.89E-51 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PA257_4500 d36046b22c996d172d76084d11bce7a3 320 Gene3D G3DSA:1.20.1510.10 23 240 3.2E-30 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PA257_4500 d36046b22c996d172d76084d11bce7a3 320 Pfam PF01545 Cation efflux family 30 240 1.1E-41 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PA257_4500 d36046b22c996d172d76084d11bce7a3 320 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 314 1.5E-65 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PA257_5908 6e5d15b490cdf4b8460e6e850678e86a 150 Pfam PF13511 Domain of unknown function (DUF4124) 10 67 1.6E-15 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 PA257_2516 ea4b798f087188a0f5550b4a7c5c5c7f 963 Gene3D G3DSA:3.40.50.300 509 656 7.7E-9 T 12-10-2018 PA257_2516 ea4b798f087188a0f5550b4a7c5c5c7f 963 Gene3D G3DSA:3.40.50.300 722 912 1.4E-16 T 12-10-2018 PA257_2516 ea4b798f087188a0f5550b4a7c5c5c7f 963 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 62 339 4.4E-73 T 12-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase PA257_2516 ea4b798f087188a0f5550b4a7c5c5c7f 963 SUPERFAMILY SSF52540 482 877 1.0E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2516 ea4b798f087188a0f5550b4a7c5c5c7f 963 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 51 953 0.0 T 12-10-2018 IPR022303 Conjugative transfer ATPase PA257_3314 8620921c04c85475c750090892490b9d 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 246 3.3E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3314 8620921c04c85475c750090892490b9d 254 SUPERFAMILY SSF161098 56 239 1.7E-29 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3314 8620921c04c85475c750090892490b9d 254 Gene3D G3DSA:1.10.3720.10 55 248 2.5E-24 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5499 52e8b4b61635dfaa9791524f7549dd69 130 Gene3D G3DSA:3.30.230.10 1 130 2.2E-53 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PA257_5499 52e8b4b61635dfaa9791524f7549dd69 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.1E-46 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PA257_5499 52e8b4b61635dfaa9791524f7549dd69 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.217 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid PA257_5499 52e8b4b61635dfaa9791524f7549dd69 130 SUPERFAMILY SSF54211 6 130 1.93E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PA257_5499 52e8b4b61635dfaa9791524f7549dd69 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 PA257_3133 68ebcefb0a1a10b99bd631e552ec28ac 1234 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 157 228 2.6E-25 T 12-10-2018 IPR013491 Caudovirus, tape measure, N-terminal PA257_0487 68ebcefb0a1a10b99bd631e552ec28ac 1234 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 157 228 2.6E-25 T 12-10-2018 IPR013491 Caudovirus, tape measure, N-terminal PA257_2625 d24de9c74060bedb04a5b9946d2d0573 117 Pfam PF11284 Protein of unknown function (DUF3085) 22 111 2.0E-32 T 12-10-2018 IPR021436 Protein of unknown function DUF3085 PA257_0754 34ab9de7a89191583c922a4203cfc3eb 415 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 216 407 2.8E-10 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0754 34ab9de7a89191583c922a4203cfc3eb 415 Gene3D G3DSA:1.10.3720.10 163 413 2.3E-48 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0754 34ab9de7a89191583c922a4203cfc3eb 415 SUPERFAMILY SSF161098 189 403 9.94E-44 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5193 7e808965b3a231a92c4ccd4754b917e5 175 Pfam PF11358 Protein of unknown function (DUF3158) 11 165 1.2E-71 T 12-10-2018 IPR021502 Protein of unknown function DUF3158 PA257_1371 59a8706e6bf65679c27fa8d2c570c0ca 264 SUPERFAMILY SSF56317 6 258 3.01E-65 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_1371 59a8706e6bf65679c27fa8d2c570c0ca 264 Pfam PF00795 Carbon-nitrogen hydrolase 12 249 2.0E-31 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PA257_1371 59a8706e6bf65679c27fa8d2c570c0ca 264 Gene3D G3DSA:3.60.110.10 7 264 1.0E-87 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PA257_4305 9d930f55eb9fdb95031be86e0a6fa8f3 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.2E-8 T 12-10-2018 PA257_4305 9d930f55eb9fdb95031be86e0a6fa8f3 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.2E-8 T 12-10-2018 PA257_4305 9d930f55eb9fdb95031be86e0a6fa8f3 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 1.2E-8 T 12-10-2018 PA257_4305 9d930f55eb9fdb95031be86e0a6fa8f3 412 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 206 222 1.1E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_4305 9d930f55eb9fdb95031be86e0a6fa8f3 412 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.1E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_4305 9d930f55eb9fdb95031be86e0a6fa8f3 412 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.1E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PA257_4305 9d930f55eb9fdb95031be86e0a6fa8f3 412 Gene3D G3DSA:3.50.50.60 125 249 2.8E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4305 9d930f55eb9fdb95031be86e0a6fa8f3 412 Gene3D G3DSA:3.50.50.60 8 304 2.8E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4305 9d930f55eb9fdb95031be86e0a6fa8f3 412 SUPERFAMILY SSF51905 2 315 9.33E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4305 9d930f55eb9fdb95031be86e0a6fa8f3 412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 294 2.6E-18 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PA257_1997 fc4e7b90eb217e892011275708ddf1ec 203 SUPERFAMILY SSF88946 4 97 7.26E-23 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_1997 fc4e7b90eb217e892011275708ddf1ec 203 SUPERFAMILY SSF88659 120 194 6.54E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_1997 fc4e7b90eb217e892011275708ddf1ec 203 Pfam PF08281 Sigma-70, region 4 137 189 4.7E-11 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_1997 fc4e7b90eb217e892011275708ddf1ec 203 Pfam PF04542 Sigma-70 region 2 24 90 2.1E-12 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_1997 fc4e7b90eb217e892011275708ddf1ec 203 Gene3D G3DSA:1.10.10.10 119 197 2.9E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1997 fc4e7b90eb217e892011275708ddf1ec 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 189 4.1E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_1997 fc4e7b90eb217e892011275708ddf1ec 203 Gene3D G3DSA:1.10.1740.10 2 114 1.3E-25 T 12-10-2018 PA257_1155 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 Pfam PF04359 Protein of unknown function (DUF493) 10 93 2.1E-27 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 PA257_1155 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 Gene3D G3DSA:3.30.70.260 6 93 4.1E-27 T 12-10-2018 PA257_1155 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 93 25.298 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 PA257_1155 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 SUPERFAMILY SSF117991 7 93 4.32E-25 T 12-10-2018 IPR027471 YbeD-like domain superfamily PA257_6564 05ada302382ebc976de892abc795aad2 109 Pfam PF09498 Protein of unknown function (DUF2388) 31 100 3.2E-32 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_6564 05ada302382ebc976de892abc795aad2 109 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 100 2.0E-33 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_6104 19af9010db30c3e1958118dfec750d57 179 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 78 173 1.4E-23 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PA257_6104 19af9010db30c3e1958118dfec750d57 179 Pfam PF03061 Thioesterase superfamily 88 165 1.1E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_6104 19af9010db30c3e1958118dfec750d57 179 Gene3D G3DSA:3.10.129.10 53 178 3.0E-38 T 12-10-2018 PA257_6104 19af9010db30c3e1958118dfec750d57 179 SUPERFAMILY SSF54637 7 173 6.06E-37 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_2420 97ae7a834a447abd3c6487aa9771f637 264 Gene3D G3DSA:1.10.12.10 208 264 5.4E-24 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PA257_2420 97ae7a834a447abd3c6487aa9771f637 264 SUPERFAMILY SSF52096 5 263 6.49E-69 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_2420 97ae7a834a447abd3c6487aa9771f637 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 264 5.1E-53 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_2420 97ae7a834a447abd3c6487aa9771f637 264 Gene3D G3DSA:3.90.226.10 1 207 8.2E-63 T 12-10-2018 PA257_0153 279fd18557dcb2de7c978a27209ef2bf 497 SUPERFAMILY SSF53720 3 483 3.67E-149 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_0153 279fd18557dcb2de7c978a27209ef2bf 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_0153 279fd18557dcb2de7c978a27209ef2bf 497 Gene3D G3DSA:3.40.605.10 22 458 1.0E-155 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_0153 279fd18557dcb2de7c978a27209ef2bf 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 1.7E-210 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 PA257_0153 279fd18557dcb2de7c978a27209ef2bf 497 Pfam PF00171 Aldehyde dehydrogenase family 15 477 5.5E-140 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_0153 279fd18557dcb2de7c978a27209ef2bf 497 Gene3D G3DSA:3.40.309.10 248 450 1.0E-155 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_3070 b21fd42042bce8bc854d8a69e5d7b391 417 SUPERFAMILY SSF140860 247 325 4.32E-8 T 12-10-2018 PA257_3070 b21fd42042bce8bc854d8a69e5d7b391 417 Gene3D G3DSA:1.25.40.20 227 392 1.1E-5 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 Pfam PF13416 Bacterial extracellular solute-binding protein 38 317 3.1E-30 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 Gene3D G3DSA:3.40.190.10 25 320 9.9E-106 T 12-10-2018 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 Gene3D G3DSA:3.40.190.10 125 349 9.9E-106 T 12-10-2018 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PIRSF PIRSF019574 1 353 4.1E-99 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 298 324 6.9E-41 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 63 6.9E-41 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 85 98 6.9E-41 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 144 158 6.9E-41 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 116 132 6.9E-41 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 6.9E-41 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 69 83 6.9E-41 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 253 272 6.9E-41 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 26 42 6.9E-41 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 6.9E-41 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_1664 b967fc293f592dbf0c9627bcc3ca9db4 353 SUPERFAMILY SSF53850 21 351 2.4E-83 T 12-10-2018 PA257_6782 9dfe4dd834806c4f85da8d254b490c49 294 Pfam PF05853 beta-keto acid cleavage enzyme 5 291 5.0E-97 T 12-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 PA257_6782 9dfe4dd834806c4f85da8d254b490c49 294 Gene3D G3DSA:3.20.20.70 2 293 1.1E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 Gene3D G3DSA:3.30.70.20 364 485 4.0E-11 T 12-10-2018 PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 275 2.3E-48 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 Pfam PF13183 4Fe-4S dicluster domain 367 422 3.9E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 SUPERFAMILY SSF46548 325 437 2.51E-17 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 Pfam PF10531 SLBB domain 290 337 7.8E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 Gene3D G3DSA:3.40.50.11540 136 283 1.6E-13 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 408 419 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 774 193.025 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 SUPERFAMILY SSF142019 87 294 7.45E-57 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 Pfam PF13375 RnfC Barrel sandwich hybrid domain 6 106 4.7E-32 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain PA257_1776 f82e13d3bbb97d58345d018564d43b4c 774 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 438 2.2E-192 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 PA257_4734 031c5ec358f867f12749b64263c2e539 682 PRINTS PR01005 Flagellar hook-associated protein signature 362 384 4.4E-14 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PA257_4734 031c5ec358f867f12749b64263c2e539 682 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 4.4E-14 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PA257_4734 031c5ec358f867f12749b64263c2e539 682 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 4.4E-14 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PA257_4734 031c5ec358f867f12749b64263c2e539 682 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 4.4E-14 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PA257_4734 031c5ec358f867f12749b64263c2e539 682 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 4.4E-14 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PA257_4734 031c5ec358f867f12749b64263c2e539 682 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 346 5.3E-76 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PA257_4734 031c5ec358f867f12749b64263c2e539 682 SUPERFAMILY SSF64518 145 455 1.44E-16 T 12-10-2018 PA257_4734 031c5ec358f867f12749b64263c2e539 682 SUPERFAMILY SSF64518 502 682 9.15E-22 T 12-10-2018 PA257_4734 031c5ec358f867f12749b64263c2e539 682 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 625 679 1.4E-8 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PA257_2654 bdf7a1caff6bec8f20527b26649dff0c 80 Pfam PF11747 Killing trait 11 76 7.1E-26 T 12-10-2018 IPR021070 Killing trait, RebB PA257_1220 20937510944275851098ed62954bd555 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 268 1.3E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_1220 20937510944275851098ed62954bd555 272 Gene3D G3DSA:1.10.3720.10 73 269 3.0E-28 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1220 20937510944275851098ed62954bd555 272 SUPERFAMILY SSF161098 76 261 6.8E-36 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3275 3e07f7a4078a9fabab8089875016bf61 165 Pfam PF05638 Type VI secretion system effector, Hcp 11 138 5.3E-29 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp PA257_3275 3e07f7a4078a9fabab8089875016bf61 165 SUPERFAMILY SSF141452 10 162 4.05E-42 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_3275 3e07f7a4078a9fabab8089875016bf61 165 Gene3D G3DSA:2.30.110.20 1 164 7.2E-45 T 12-10-2018 IPR036624 Hcp1-like superfamily PA257_1623 027ad4d9e32fd885aedc88dfa4e71689 628 Pfam PF05876 Phage terminase large subunit (GpA) 13 583 1.2E-155 T 12-10-2018 IPR008866 Bacteriophage lambda, GpA PA257_0755 88ab17f73e1471c92999ea5a57ca2d9d 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 258 3.5E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0755 88ab17f73e1471c92999ea5a57ca2d9d 276 SUPERFAMILY SSF161098 11 267 3.08E-59 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0755 88ab17f73e1471c92999ea5a57ca2d9d 276 Gene3D G3DSA:1.10.3720.10 11 272 1.1E-57 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3868 164701c37ea6952ef8a6ee31559e9080 153 SUPERFAMILY SSF54292 2 78 7.73E-26 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_3868 164701c37ea6952ef8a6ee31559e9080 153 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PA257_3868 164701c37ea6952ef8a6ee31559e9080 153 Gene3D G3DSA:3.10.20.30 1 74 5.8E-28 T 12-10-2018 IPR012675 Beta-grasp domain superfamily PA257_3868 164701c37ea6952ef8a6ee31559e9080 153 Pfam PF01799 [2Fe-2S] binding domain 73 144 3.7E-25 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PA257_3868 164701c37ea6952ef8a6ee31559e9080 153 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 59 8.2E-9 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PA257_3868 164701c37ea6952ef8a6ee31559e9080 153 Gene3D G3DSA:1.10.150.120 75 153 1.3E-24 T 12-10-2018 PA257_3868 164701c37ea6952ef8a6ee31559e9080 153 SUPERFAMILY SSF47741 73 151 4.06E-30 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily PA257_1098 2dc0859e4533e7c3d3f9b09f400300cc 159 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 21 147 4.2E-44 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 PA257_1098 2dc0859e4533e7c3d3f9b09f400300cc 159 Gene3D G3DSA:1.10.940.10 15 154 2.0E-48 T 12-10-2018 IPR035926 NusB-like superfamily PA257_1098 2dc0859e4533e7c3d3f9b09f400300cc 159 SUPERFAMILY SSF48013 19 150 3.14E-43 T 12-10-2018 IPR035926 NusB-like superfamily PA257_1098 2dc0859e4533e7c3d3f9b09f400300cc 159 Pfam PF01029 NusB family 22 146 6.5E-34 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PA257_1098 2dc0859e4533e7c3d3f9b09f400300cc 159 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 19 150 22.445 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 PA257_6922 4bfa13b914e7389c477be88d078d6c6a 247 Gene3D G3DSA:1.25.40.10 31 175 2.8E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6922 4bfa13b914e7389c477be88d078d6c6a 247 SUPERFAMILY SSF48452 32 106 1.46E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1649 a767e6d203cdf745c591a3df6914d399 209 Pfam PF00182 Chitinase class I 99 167 1.0E-4 T 12-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 PA257_1649 a767e6d203cdf745c591a3df6914d399 209 Gene3D G3DSA:1.10.530.70 29 208 3.1E-21 T 12-10-2018 PA257_1649 a767e6d203cdf745c591a3df6914d399 209 SUPERFAMILY SSF53955 3 208 1.43E-45 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_3697 82d7fd30e52ff67a532a36b5618f2cfd 252 Pfam PF03591 AzlC protein 36 173 3.4E-36 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease PA257_3829 2a91b6ef87e06cabc61c065b2f2bd828 410 Gene3D G3DSA:1.20.1740.10 13 406 4.0E-6 T 12-10-2018 PA257_3829 2a91b6ef87e06cabc61c065b2f2bd828 410 Pfam PF03222 Tryptophan/tyrosine permease family 23 371 5.3E-35 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 PA257_3829 2a91b6ef87e06cabc61c065b2f2bd828 410 PRINTS PR00166 Aromatic amino acid permease signature 341 360 1.4E-13 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_3829 2a91b6ef87e06cabc61c065b2f2bd828 410 PRINTS PR00166 Aromatic amino acid permease signature 284 303 1.4E-13 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_3829 2a91b6ef87e06cabc61c065b2f2bd828 410 PRINTS PR00166 Aromatic amino acid permease signature 97 117 1.4E-13 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_3829 2a91b6ef87e06cabc61c065b2f2bd828 410 PRINTS PR00166 Aromatic amino acid permease signature 320 338 1.4E-13 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_3829 2a91b6ef87e06cabc61c065b2f2bd828 410 PRINTS PR00166 Aromatic amino acid permease signature 25 48 1.4E-13 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_3829 2a91b6ef87e06cabc61c065b2f2bd828 410 PRINTS PR00166 Aromatic amino acid permease signature 52 71 1.4E-13 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PA257_5043 bed6c561f4e46a5f7c191ad0ae859119 163 Pfam PF03592 Terminase small subunit 3 61 1.4E-6 T 12-10-2018 IPR005335 Terminase small subunit GO:0006323 PA257_5043 bed6c561f4e46a5f7c191ad0ae859119 163 Gene3D G3DSA:1.10.10.1400 1 62 2.4E-7 T 12-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily PA257_2083 1c91b8d921ab6f788fb72ad2a09c4d64 312 Gene3D G3DSA:1.10.287.950 129 271 1.9E-5 T 12-10-2018 PA257_2083 1c91b8d921ab6f788fb72ad2a09c4d64 312 Pfam PF02470 MlaD protein 39 116 4.8E-11 T 12-10-2018 IPR003399 Mce/MlaD PA257_2083 1c91b8d921ab6f788fb72ad2a09c4d64 312 SUPERFAMILY SSF58104 159 295 5.75E-5 T 12-10-2018 PA257_2610 d781aad8c1ff662cb68eba692bea9a35 182 Pfam PF11072 Protein of unknown function (DUF2859) 34 180 4.9E-55 T 12-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 PA257_2610 d781aad8c1ff662cb68eba692bea9a35 182 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 78 182 5.1E-42 T 12-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 PA257_6436 b25a1cbd0d0469398b96dead1d10b017 86 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 11 84 1.0E-26 T 12-10-2018 IPR018680 Protein of unknown function DUF2164 PA257_1029 8b29d917769d7bf8e2a9f2beb4824052 188 Pfam PF06252 Protein of unknown function (DUF1018) 20 131 5.0E-22 T 12-10-2018 IPR009363 Bacteriophage Mu, Gp16 PA257_3244 a498ec2a40c720b3299ddf0d74b83730 291 Pfam PF00551 Formyl transferase 137 267 7.2E-5 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_3244 a498ec2a40c720b3299ddf0d74b83730 291 SUPERFAMILY SSF53328 63 290 1.57E-16 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PA257_3244 a498ec2a40c720b3299ddf0d74b83730 291 Gene3D G3DSA:3.40.50.170 111 290 1.7E-11 T 12-10-2018 PA257_4817 565e643b18a769b6be672bc6e2e3b762 185 Gene3D G3DSA:3.30.70.260 93 178 2.9E-10 T 12-10-2018 PA257_4817 565e643b18a769b6be672bc6e2e3b762 185 PIRSF PIRSF028103 7 182 2.9E-67 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 PA257_4817 565e643b18a769b6be672bc6e2e3b762 185 Gene3D G3DSA:3.30.70.260 7 90 3.0E-7 T 12-10-2018 PA257_4817 565e643b18a769b6be672bc6e2e3b762 185 Pfam PF13740 ACT domain 9 83 1.3E-14 T 12-10-2018 PA257_4817 565e643b18a769b6be672bc6e2e3b762 185 SUPERFAMILY SSF55021 7 87 5.49E-9 T 12-10-2018 PA257_4817 565e643b18a769b6be672bc6e2e3b762 185 SUPERFAMILY SSF55021 95 181 7.67E-15 T 12-10-2018 PA257_5910 2bb4edd22b0b3eb6546423167e59d636 259 SUPERFAMILY SSF48452 159 255 1.28E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5910 2bb4edd22b0b3eb6546423167e59d636 259 Gene3D G3DSA:1.25.40.10 136 257 1.7E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_4657 0994ddd6f9e569338a589f863c8a62f5 717 Pfam PF06958 S-type Pyocin 439 583 3.8E-36 T 12-10-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 PA257_4657 0994ddd6f9e569338a589f863c8a62f5 717 PRINTS PR01300 Pyocin S killer protein signature 340 361 3.4E-10 T 12-10-2018 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 PA257_4657 0994ddd6f9e569338a589f863c8a62f5 717 PRINTS PR01300 Pyocin S killer protein signature 386 404 3.4E-10 T 12-10-2018 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 PA257_4657 0994ddd6f9e569338a589f863c8a62f5 717 PRINTS PR01300 Pyocin S killer protein signature 421 444 3.4E-10 T 12-10-2018 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 PA257_4657 0994ddd6f9e569338a589f863c8a62f5 717 SUPERFAMILY SSF69369 377 613 2.62E-44 T 12-10-2018 IPR036302 Pyosin/cloacin translocation domain superfamily GO:0009405 PA257_1759 4d9da3fad9ba6a7c5e3509937b38dd26 137 ProSitePatterns PS00934 Glyoxalase I signature 1. 14 35 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PA257_1759 4d9da3fad9ba6a7c5e3509937b38dd26 137 Gene3D G3DSA:3.10.180.10 9 137 1.8E-48 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_1759 4d9da3fad9ba6a7c5e3509937b38dd26 137 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 9 136 2.7E-66 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PA257_1759 4d9da3fad9ba6a7c5e3509937b38dd26 137 ProSitePatterns PS00935 Glyoxalase I signature 2. 78 90 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PA257_1759 4d9da3fad9ba6a7c5e3509937b38dd26 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 132 4.1E-23 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_1759 4d9da3fad9ba6a7c5e3509937b38dd26 137 SUPERFAMILY SSF54593 10 135 1.48E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_4534 70ae3aeead0f0d520c0f51bab268ffe7 300 SUPERFAMILY SSF103481 50 147 1.83E-11 T 12-10-2018 PA257_4534 70ae3aeead0f0d520c0f51bab268ffe7 300 SUPERFAMILY SSF103481 214 298 3.53E-8 T 12-10-2018 PA257_4534 70ae3aeead0f0d520c0f51bab268ffe7 300 Pfam PF00892 EamA-like transporter family 162 294 2.8E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_4534 70ae3aeead0f0d520c0f51bab268ffe7 300 Pfam PF00892 EamA-like transporter family 22 146 5.6E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_3898 53ef1e04a56efadfa398a6386c217ae3 480 SUPERFAMILY SSF81442 11 469 1.28E-118 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3898 53ef1e04a56efadfa398a6386c217ae3 480 Gene3D G3DSA:1.20.210.10 6 475 2.9E-201 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_3898 53ef1e04a56efadfa398a6386c217ae3 480 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 13 468 5.1E-214 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PA257_3898 53ef1e04a56efadfa398a6386c217ae3 480 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 446 6.0E-110 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_1603 21be25a81a8b53ba21e923d8085716ba 65 Pfam PF14213 STAS-like domain of unknown function (DUF4325) 1 44 2.5E-8 T 12-10-2018 IPR025474 Domain of unknown function DUF4325 PA257_3991 c77d31df05a86199efbe60637790bb2a 108 SUPERFAMILY SSF50022 1 103 1.96E-34 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_3991 c77d31df05a86199efbe60637790bb2a 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 99 1.3E-32 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PA257_3991 c77d31df05a86199efbe60637790bb2a 108 Gene3D G3DSA:2.102.10.10 1 105 1.6E-27 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PA257_3991 c77d31df05a86199efbe60637790bb2a 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 2 98 2.4E-15 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PA257_6363 1c487ba5084526922d05365b66a4759c 235 PIRSF PIRSF015601 2 235 3.2E-46 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PA257_6363 1c487ba5084526922d05365b66a4759c 235 SUPERFAMILY SSF75217 72 234 6.28E-35 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases PA257_6363 1c487ba5084526922d05365b66a4759c 235 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 232 1.4E-21 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PA257_6363 1c487ba5084526922d05365b66a4759c 235 Pfam PF04452 RNA methyltransferase 19 234 8.2E-42 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PA257_6363 1c487ba5084526922d05365b66a4759c 235 Gene3D G3DSA:3.40.1280.10 6 235 3.0E-30 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PA257_4362 69c83907b5584af1a258a29b25084bab 69 SUPERFAMILY SSF47413 6 47 6.82E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_1833 d243245aec86c699a165b8d264972dab 123 Gene3D G3DSA:3.30.1130.10 6 123 4.7E-43 T 12-10-2018 PA257_1833 d243245aec86c699a165b8d264972dab 123 SUPERFAMILY SSF55620 7 120 2.48E-30 T 12-10-2018 PA257_1833 d243245aec86c699a165b8d264972dab 123 SMART SM00905 11 121 1.1E-32 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PA257_1833 d243245aec86c699a165b8d264972dab 123 TIGRFAM TIGR00526 folB_dom: FolB domain 8 119 1.5E-31 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PA257_1833 d243245aec86c699a165b8d264972dab 123 Pfam PF02152 Dihydroneopterin aldolase 11 119 2.1E-25 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PA257_2226 0e091fee5841e36fb1c8539f03e612c7 359 Pfam PF12740 Chlorophyllase enzyme 61 188 8.3E-14 T 12-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 PA257_2226 0e091fee5841e36fb1c8539f03e612c7 359 SUPERFAMILY SSF53474 26 253 1.13E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2226 0e091fee5841e36fb1c8539f03e612c7 359 Gene3D G3DSA:3.40.50.1820 25 282 3.9E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 Gene3D G3DSA:3.40.50.720 4 245 9.7E-71 T 12-10-2018 PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 9.8E-52 T 12-10-2018 PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_6447 15dc52e09b588afee068ebbd8a1ac832 245 SUPERFAMILY SSF51735 4 245 8.63E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_5964 9a944d568df604d032fc4a74b40c55b1 129 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 5 74 1.2E-24 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PA257_5964 9a944d568df604d032fc4a74b40c55b1 129 Pfam PF03840 Preprotein translocase SecG subunit 5 74 6.4E-20 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PA257_5964 9a944d568df604d032fc4a74b40c55b1 129 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 7.0E-41 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PA257_5964 9a944d568df604d032fc4a74b40c55b1 129 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 7.0E-41 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PA257_5964 9a944d568df604d032fc4a74b40c55b1 129 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 7.0E-41 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PA257_5964 9a944d568df604d032fc4a74b40c55b1 129 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 7.0E-41 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PA257_5116 6cfeebebaa7d972da2533ece58973064 271 Pfam PF01925 Sulfite exporter TauE/SafE 6 268 1.5E-37 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PA257_0504 20ac118568494d7509ef161050560fc6 428 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 62 176 4.4E-12 T 12-10-2018 IPR006528 Phage head morphogenesis domain PA257_0504 20ac118568494d7509ef161050560fc6 428 Pfam PF04233 Phage Mu protein F like protein 59 179 1.5E-23 T 12-10-2018 IPR006528 Phage head morphogenesis domain PA257_4675 b19c9f38645804d19c79616f69251b00 137 Pfam PF04134 Protein of unknown function, DUF393 14 122 7.6E-21 T 12-10-2018 IPR007263 Protein of unknown function DUF393 PA257_2448 3924013ca32ca084b3b92700fb5ce693 340 SUPERFAMILY SSF158855 63 335 1.06E-78 T 12-10-2018 PA257_2448 3924013ca32ca084b3b92700fb5ce693 340 Hamap MF_00790 Lipase chaperone [lifO]. 1 333 24.217 T 12-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 PA257_2448 3924013ca32ca084b3b92700fb5ce693 340 Pfam PF03280 Proteobacterial lipase chaperone protein 135 325 1.5E-54 T 12-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 PA257_0613 46bdab3f2e9e61fcd5f5a96a269cc776 443 Gene3D G3DSA:1.20.1050.10 276 394 2.0E-47 T 12-10-2018 PA257_0613 46bdab3f2e9e61fcd5f5a96a269cc776 443 Pfam PF13417 Glutathione S-transferase, N-terminal domain 202 274 2.5E-20 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_0613 46bdab3f2e9e61fcd5f5a96a269cc776 443 SUPERFAMILY SSF47616 266 401 1.74E-16 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_0613 46bdab3f2e9e61fcd5f5a96a269cc776 443 Gene3D G3DSA:3.40.30.10 204 398 2.0E-47 T 12-10-2018 PA257_0613 46bdab3f2e9e61fcd5f5a96a269cc776 443 SUPERFAMILY SSF52833 199 298 1.89E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 Gene3D G3DSA:3.40.50.720 1 256 7.0E-85 T 12-10-2018 PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 255 3.7E-54 T 12-10-2018 PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.7E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.7E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.7E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 SUPERFAMILY SSF51735 4 256 8.0E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1886 ae0d60f701e2992eeb8adb252146decf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.7E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_6333 f01c2bd282731cc602621051a8fbf56b 207 Pfam PF04350 Pilus assembly protein, PilO 58 202 5.6E-57 T 12-10-2018 IPR007445 Pilus assembly protein, PilO PA257_6333 f01c2bd282731cc602621051a8fbf56b 207 PIRSF PIRSF016482 1 206 1.6E-88 T 12-10-2018 IPR007445 Pilus assembly protein, PilO PA257_6333 f01c2bd282731cc602621051a8fbf56b 207 Gene3D G3DSA:1.10.287.540 67 102 3.6E-20 T 12-10-2018 PA257_6333 f01c2bd282731cc602621051a8fbf56b 207 Gene3D G3DSA:3.30.70.60 103 207 9.5E-42 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PA257_5480 cc9a4ef7e24080549f7553173ddecc6c 399 Pfam PF01098 Cell cycle protein 25 380 2.8E-103 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5480 cc9a4ef7e24080549f7553173ddecc6c 399 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 337 361 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5480 cc9a4ef7e24080549f7553173ddecc6c 399 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 19 388 40.121 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5480 cc9a4ef7e24080549f7553173ddecc6c 399 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 378 4.4E-129 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PA257_5238 bed5743836682e61a0c4ff9445275e23 193 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 1 172 9.6E-65 T 12-10-2018 IPR019219 Protein of unknown function DUF2130 PA257_5865 7cc1b59ec83b2ba8c1e7c498380728a8 118 Pfam PF10734 Protein of unknown function (DUF2523) 37 111 3.5E-9 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 PA257_5279 7cc1b59ec83b2ba8c1e7c498380728a8 118 Pfam PF10734 Protein of unknown function (DUF2523) 37 111 3.5E-9 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 PA257_1317 0aa80802092e3fdef38eec9d4790df77 451 Gene3D G3DSA:3.40.190.10 122 263 2.9E-35 T 12-10-2018 PA257_1317 0aa80802092e3fdef38eec9d4790df77 451 SUPERFAMILY SSF53850 41 319 5.02E-41 T 12-10-2018 PA257_1317 0aa80802092e3fdef38eec9d4790df77 451 Gene3D G3DSA:3.40.190.10 46 319 2.9E-35 T 12-10-2018 PA257_1317 0aa80802092e3fdef38eec9d4790df77 451 Pfam PF16868 NMT1-like family 46 319 2.5E-20 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family PA257_6861 f3e4ed4e8cce02ff4386ad2a7da049fb 105 Pfam PF09498 Protein of unknown function (DUF2388) 37 104 5.0E-32 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_6861 f3e4ed4e8cce02ff4386ad2a7da049fb 105 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 104 2.5E-42 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_2258 647f0be76057b411ed207e60bbe866f0 126 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 14 123 2.1E-19 T 12-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PA257_3037 cf8096f28a1c54530dfa1b92f9582272 165 Pfam PF08534 Redoxin 19 162 1.1E-27 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 PA257_3037 cf8096f28a1c54530dfa1b92f9582272 165 SUPERFAMILY SSF52833 1 163 1.64E-42 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_3037 cf8096f28a1c54530dfa1b92f9582272 165 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 38.273 T 12-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 PA257_3037 cf8096f28a1c54530dfa1b92f9582272 165 Gene3D G3DSA:3.40.30.10 1 165 5.2E-47 T 12-10-2018 PA257_3037 cf8096f28a1c54530dfa1b92f9582272 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 12-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 PA257_0300 7c6848dd468e3076d1240469378ff1ec 217 SUPERFAMILY SSF48592 100 196 3.79E-22 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily PA257_0300 7c6848dd468e3076d1240469378ff1ec 217 Gene3D G3DSA:1.10.560.10 99 202 3.0E-16 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily PA257_0300 7c6848dd468e3076d1240469378ff1ec 217 Pfam PF00118 TCP-1/cpn60 chaperonin family 103 194 2.0E-18 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PA257_0300 7c6848dd468e3076d1240469378ff1ec 217 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 6.1E-24 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PA257_0300 7c6848dd468e3076d1240469378ff1ec 217 Gene3D G3DSA:1.10.150.130 13 98 3.6E-31 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_5252 7c6848dd468e3076d1240469378ff1ec 217 SUPERFAMILY SSF48592 100 196 3.79E-22 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily PA257_5252 7c6848dd468e3076d1240469378ff1ec 217 Gene3D G3DSA:1.10.560.10 99 202 3.0E-16 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily PA257_5252 7c6848dd468e3076d1240469378ff1ec 217 Pfam PF00118 TCP-1/cpn60 chaperonin family 103 194 2.0E-18 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PA257_5252 7c6848dd468e3076d1240469378ff1ec 217 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 6.1E-24 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PA257_5252 7c6848dd468e3076d1240469378ff1ec 217 Gene3D G3DSA:1.10.150.130 13 98 3.6E-31 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_6630 c9a22964239eacf6319ed14826e721a3 56 Pfam PF06945 Protein of unknown function (DUF1289) 3 48 9.7E-16 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 PA257_5127 e49afe9b8769c44888a51bb66f2d324f 687 Pfam PF00593 TonB dependent receptor 208 685 5.4E-43 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_5127 e49afe9b8769c44888a51bb66f2d324f 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 156 4.4E-20 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_5127 e49afe9b8769c44888a51bb66f2d324f 687 Gene3D G3DSA:2.40.170.20 168 687 8.8E-70 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_5127 e49afe9b8769c44888a51bb66f2d324f 687 SUPERFAMILY SSF56935 55 687 9.16E-95 T 12-10-2018 PA257_5127 e49afe9b8769c44888a51bb66f2d324f 687 Gene3D G3DSA:2.170.130.10 50 166 8.1E-27 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_1831 17b341176dee7ffa3ef1cc41de27c208 112 Pfam PF08888 HopJ type III effector protein 4 108 2.7E-38 T 12-10-2018 IPR014984 HopJ type III effector protein PA257_1831 17b341176dee7ffa3ef1cc41de27c208 112 Gene3D G3DSA:3.20.160.10 1 111 9.8E-39 T 12-10-2018 IPR038604 Type III effector HopJ superfamily PA257_4088 b86d19132f860ac4158314496ce9000c 297 Gene3D G3DSA:1.10.340.30 128 243 1.2E-35 T 12-10-2018 PA257_4088 b86d19132f860ac4158314496ce9000c 297 Gene3D G3DSA:3.30.310.20 9 126 7.5E-30 T 12-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily PA257_4088 b86d19132f860ac4158314496ce9000c 297 SUPERFAMILY SSF48150 117 293 1.47E-45 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PA257_4088 b86d19132f860ac4158314496ce9000c 297 SUPERFAMILY SSF55945 9 107 1.88E-27 T 12-10-2018 PA257_4088 b86d19132f860ac4158314496ce9000c 297 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 132 259 5.0E-8 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PA257_4088 b86d19132f860ac4158314496ce9000c 297 Gene3D G3DSA:1.10.1670.10 245 295 2.8E-11 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 PA257_4088 b86d19132f860ac4158314496ce9000c 297 SMART SM01009 9 126 8.4E-49 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal PA257_4088 b86d19132f860ac4158314496ce9000c 297 SMART SM00478 136 294 3.6E-15 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PA257_4088 b86d19132f860ac4158314496ce9000c 297 Pfam PF06029 AlkA N-terminal domain 9 126 9.0E-32 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal PA257_1874 d16ba9260a3c6529cf5151beb1fb3802 113 Pfam PF07119 Protein of unknown function (DUF1375) 11 99 4.4E-21 T 12-10-2018 IPR010780 Protein of unknown function DUF1375 PA257_1121 ab5a9c660dafc2f9cb3cf004aa02f5f1 276 SUPERFAMILY SSF55486 39 251 4.83E-38 T 12-10-2018 PA257_1121 ab5a9c660dafc2f9cb3cf004aa02f5f1 276 Pfam PF06167 Glucose-regulated metallo-peptidase M90 5 249 6.8E-88 T 12-10-2018 IPR010384 MtfA family PA257_1121 ab5a9c660dafc2f9cb3cf004aa02f5f1 276 Gene3D G3DSA:1.10.472.150 19 142 1.2E-36 T 12-10-2018 PA257_1121 ab5a9c660dafc2f9cb3cf004aa02f5f1 276 Gene3D G3DSA:3.40.390.10 146 270 4.9E-41 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 PA257_4915 309780e641439109f302572d65c2d7a2 135 Pfam PF03724 META domain 28 129 2.9E-27 T 12-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ PA257_4915 309780e641439109f302572d65c2d7a2 135 Gene3D G3DSA:2.40.128.270 17 132 4.9E-22 T 12-10-2018 IPR038670 HslJ-like superfamily PA257_2569 093ba281ca6f5ece09de46302695507b 102 Gene3D G3DSA:3.30.1330.40 1 102 3.2E-20 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_2569 093ba281ca6f5ece09de46302695507b 102 SUPERFAMILY SSF55298 2 101 2.83E-21 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_2569 093ba281ca6f5ece09de46302695507b 102 Pfam PF01042 Endoribonuclease L-PSP 1 100 1.1E-16 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PA257_1540 8ff8a23c7a15dac52a89855a5f414b41 231 Pfam PF06904 Extensin-like protein C-terminus 60 231 2.0E-59 T 12-10-2018 IPR009683 Extensin-like, C-terminal PA257_5930 61335bac7a38688e5aec3bf526e2070b 297 Pfam PF04228 Putative neutral zinc metallopeptidase 1 292 2.1E-136 T 12-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PA257_3624 4749f681d2ecf33ef1805c7337d749e6 423 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PA257_3624 4749f681d2ecf33ef1805c7337d749e6 423 Pfam PF07690 Major Facilitator Superfamily 35 289 3.0E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3624 4749f681d2ecf33ef1805c7337d749e6 423 SUPERFAMILY SSF103473 20 422 1.07E-73 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3624 4749f681d2ecf33ef1805c7337d749e6 423 Gene3D G3DSA:1.20.1250.20 25 423 1.1E-69 T 12-10-2018 PA257_5402 5c7514f106e134c499d3507f86e95295 426 Pfam PF01757 Acyltransferase family 12 397 2.6E-30 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 PA257_2021 234e8a451449b9de1c49dc98813f5971 311 Pfam PF01758 Sodium Bile acid symporter family 42 218 1.1E-43 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PA257_2021 234e8a451449b9de1c49dc98813f5971 311 Gene3D G3DSA:1.20.1530.20 1 306 7.6E-109 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_5106 78b69eb23a24440dbd8101f74865bff3 98 Pfam PF12365 Protein of unknown function (DUF3649) 64 90 1.8E-7 T 12-10-2018 IPR022109 Protein of unknown function DUF3649 PA257_2305 093caa195848d9a6f5173344849079dc 403 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 398 1.0E-197 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 PA257_2305 093caa195848d9a6f5173344849079dc 403 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 402 37.626 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 PA257_2305 093caa195848d9a6f5173344849079dc 403 PIRSF PIRSF016055 1 403 1.8E-204 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 PA257_2305 093caa195848d9a6f5173344849079dc 403 Pfam PF03116 NQR2, RnfD, RnfE family 41 395 3.1E-110 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 PA257_4045 70ce0ddaacb7f5e9cefb01a1f5a9970e 232 Gene3D G3DSA:3.40.50.880 1 232 1.1E-65 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4045 70ce0ddaacb7f5e9cefb01a1f5a9970e 232 SUPERFAMILY SSF52317 4 193 8.22E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_4045 70ce0ddaacb7f5e9cefb01a1f5a9970e 232 Pfam PF00117 Glutamine amidotransferase class-I 24 178 2.6E-17 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_4924 ba46943f1446c012c8b63a5893e18252 634 Pfam PF02705 K+ potassium transporter 24 556 3.6E-205 T 12-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 PA257_4924 ba46943f1446c012c8b63a5893e18252 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 15 634 34.238 T 12-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup PA257_0254 6694f8a07393a2dfb213778d0ad4267e 260 SUPERFAMILY SSF100950 2 245 3.87E-72 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_0254 6694f8a07393a2dfb213778d0ad4267e 260 Pfam PF01144 Coenzyme A transferase 8 217 1.6E-48 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PA257_0254 6694f8a07393a2dfb213778d0ad4267e 260 SMART SM00882 8 217 9.4E-41 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PA257_0254 6694f8a07393a2dfb213778d0ad4267e 260 Gene3D G3DSA:3.40.1080.10 1 249 7.6E-82 T 12-10-2018 PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 Hamap MF_01987 Ribokinase [rbsK]. 3 303 27.896 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 Gene3D G3DSA:3.40.1190.20 1 307 1.3E-108 T 12-10-2018 IPR029056 Ribokinase-like PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 SUPERFAMILY SSF53613 3 303 4.05E-89 T 12-10-2018 IPR029056 Ribokinase-like PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 PRINTS PR00990 Ribokinase signature 175 190 3.6E-36 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 PRINTS PR00990 Ribokinase signature 106 119 3.6E-36 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 PRINTS PR00990 Ribokinase signature 219 230 3.6E-36 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 PRINTS PR00990 Ribokinase signature 34 53 3.6E-36 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 PRINTS PR00990 Ribokinase signature 7 28 3.6E-36 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 301 7.7E-119 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PA257_3792 670e066b473a0e93d574d1b51beb7acf 308 Pfam PF00294 pfkB family carbohydrate kinase 3 296 2.0E-74 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB PA257_6157 0ebcae395eea5f6f3bc393a46d84b50d 689 Pfam PF05170 AsmA family 1 575 7.1E-182 T 12-10-2018 IPR007844 AsmA PA257_1421 22c6191aab7cc8c2022cb90c997920d4 90 SUPERFAMILY SSF47598 46 85 1.78E-7 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PA257_4084 69f2e74ee303c40d95ada0d82a1d8dcb 349 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 340 2.4E-110 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4084 69f2e74ee303c40d95ada0d82a1d8dcb 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 8.4E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4084 69f2e74ee303c40d95ada0d82a1d8dcb 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 8.4E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4084 69f2e74ee303c40d95ada0d82a1d8dcb 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 8.4E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4084 69f2e74ee303c40d95ada0d82a1d8dcb 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 8.4E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4084 69f2e74ee303c40d95ada0d82a1d8dcb 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 8.4E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PA257_4084 69f2e74ee303c40d95ada0d82a1d8dcb 349 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 3.9E-142 T 12-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 PA257_4084 69f2e74ee303c40d95ada0d82a1d8dcb 349 Gene3D G3DSA:3.40.1690.10 211 348 1.6E-53 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal PA257_4084 69f2e74ee303c40d95ada0d82a1d8dcb 349 SUPERFAMILY SSF160544 238 343 1.44E-31 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal PA257_5416 cb1a17577243ca5e970b4aa19c9db57d 286 Pfam PF00582 Universal stress protein family 139 282 5.3E-23 T 12-10-2018 IPR006016 UspA PA257_5416 cb1a17577243ca5e970b4aa19c9db57d 286 Pfam PF00582 Universal stress protein family 1 129 3.5E-31 T 12-10-2018 IPR006016 UspA PA257_5416 cb1a17577243ca5e970b4aa19c9db57d 286 SUPERFAMILY SSF52402 1 129 1.59E-30 T 12-10-2018 PA257_5416 cb1a17577243ca5e970b4aa19c9db57d 286 PRINTS PR01438 Universal stress protein signature 1 18 4.7E-12 T 12-10-2018 IPR006015 Universal stress protein A PA257_5416 cb1a17577243ca5e970b4aa19c9db57d 286 PRINTS PR01438 Universal stress protein signature 92 104 4.7E-12 T 12-10-2018 IPR006015 Universal stress protein A PA257_5416 cb1a17577243ca5e970b4aa19c9db57d 286 PRINTS PR01438 Universal stress protein signature 110 132 4.7E-12 T 12-10-2018 IPR006015 Universal stress protein A PA257_5416 cb1a17577243ca5e970b4aa19c9db57d 286 Gene3D G3DSA:3.40.50.620 1 133 1.3E-29 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_5416 cb1a17577243ca5e970b4aa19c9db57d 286 SUPERFAMILY SSF52402 139 284 3.43E-25 T 12-10-2018 PA257_5416 cb1a17577243ca5e970b4aa19c9db57d 286 Gene3D G3DSA:3.40.50.620 137 281 2.3E-24 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PA257_1101 1c98fd24ee16c2e18472f7f6969d2232 248 SUPERFAMILY SSF53850 26 234 5.61E-28 T 12-10-2018 PA257_1101 1c98fd24ee16c2e18472f7f6969d2232 248 Gene3D G3DSA:3.40.190.10 104 193 1.9E-11 T 12-10-2018 PA257_1101 1c98fd24ee16c2e18472f7f6969d2232 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 233 1.6E-10 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1101 1c98fd24ee16c2e18472f7f6969d2232 248 Gene3D G3DSA:3.40.190.10 36 233 1.9E-11 T 12-10-2018 PA257_3491 aa0511acc8da72b8135c3c88c62adaf5 290 Gene3D G3DSA:2.60.120.620 1 277 2.3E-84 T 12-10-2018 PA257_3491 aa0511acc8da72b8135c3c88c62adaf5 290 SUPERFAMILY SSF51197 12 257 3.66E-46 T 12-10-2018 PA257_3491 aa0511acc8da72b8135c3c88c62adaf5 290 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 18 216 3.1E-40 T 12-10-2018 IPR008775 Phytanoyl-CoA dioxygenase PA257_3570 8b5a467541562d3c2ea3cfe0bc8f97da 312 Pfam PF01904 Protein of unknown function DUF72 24 288 2.5E-67 T 12-10-2018 IPR002763 Protein of unknown function DUF72 PA257_3570 8b5a467541562d3c2ea3cfe0bc8f97da 312 Gene3D G3DSA:3.20.20.410 2 292 3.8E-66 T 12-10-2018 IPR036520 UPF0759 superfamily PA257_3570 8b5a467541562d3c2ea3cfe0bc8f97da 312 SUPERFAMILY SSF117396 6 291 1.96E-79 T 12-10-2018 IPR036520 UPF0759 superfamily PA257_3439 5807632eb97dab03d699d66211f98bdc 235 Pfam PF05155 Phage X family 143 228 1.8E-18 T 12-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 PA257_3429 5807632eb97dab03d699d66211f98bdc 235 Pfam PF05155 Phage X family 143 228 1.8E-18 T 12-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 PA257_0241 c694cd5edfb4c6aed8a8e03b64c4ac8c 134 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 120 4.5E-46 T 12-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 PA257_0241 c694cd5edfb4c6aed8a8e03b64c4ac8c 134 Pfam PF03817 Malonate transporter MadL subunit 1 117 2.7E-50 T 12-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 PA257_0876 1c795383c3934b361744880a84f5ae77 501 Pfam PF03929 PepSY-associated TM region 9 360 5.7E-38 T 12-10-2018 IPR005625 PepSY-associated TM protein PA257_3980 43d6ed368d8b4b31f6ffef4fe7846ec9 287 Pfam PF00582 Universal stress protein family 133 272 1.0E-13 T 12-10-2018 IPR006016 UspA PA257_3980 43d6ed368d8b4b31f6ffef4fe7846ec9 287 SUPERFAMILY SSF52402 2 124 6.53E-15 T 12-10-2018 PA257_3980 43d6ed368d8b4b31f6ffef4fe7846ec9 287 Gene3D G3DSA:3.40.50.12370 1 287 8.5E-116 T 12-10-2018 PA257_3980 43d6ed368d8b4b31f6ffef4fe7846ec9 287 SUPERFAMILY SSF52402 133 276 1.34E-16 T 12-10-2018 PA257_2861 9dd420ebba75948399dee152dd3f7781 304 Gene3D G3DSA:3.40.50.1820 36 301 9.7E-66 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2861 9dd420ebba75948399dee152dd3f7781 304 Pfam PF00756 Putative esterase 62 212 1.1E-12 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 PA257_2861 9dd420ebba75948399dee152dd3f7781 304 SUPERFAMILY SSF53474 39 293 4.55E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0595 eb5d23adf3fe34698e915be419258518 174 Pfam PF05618 Putative ATP-dependant zinc protease 30 166 5.2E-49 T 12-10-2018 PA257_0595 eb5d23adf3fe34698e915be419258518 174 Gene3D G3DSA:2.40.70.10 28 157 2.8E-37 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_0595 eb5d23adf3fe34698e915be419258518 174 SUPERFAMILY SSF50630 31 163 3.75E-36 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_6605 c8970dfe5ceef2738b2336025d55d18e 192 Pfam PF00924 Mechanosensitive ion channel 60 181 4.0E-14 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PA257_6605 c8970dfe5ceef2738b2336025d55d18e 192 SUPERFAMILY SSF82861 19 96 3.27E-6 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PA257_6605 c8970dfe5ceef2738b2336025d55d18e 192 SUPERFAMILY SSF50182 104 179 6.87E-10 T 12-10-2018 IPR010920 LSM domain superfamily PA257_0540 025ea774c477859da6eaf9644f1c334d 189 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 7 189 37.01 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 PA257_0540 025ea774c477859da6eaf9644f1c334d 189 Pfam PF02622 Uncharacterized ACR, COG1678 18 176 4.4E-47 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 PA257_0540 025ea774c477859da6eaf9644f1c334d 189 SUPERFAMILY SSF143456 7 189 9.68E-62 T 12-10-2018 PA257_0540 025ea774c477859da6eaf9644f1c334d 189 Gene3D G3DSA:3.40.1740.10 1 189 3.4E-77 T 12-10-2018 PA257_0673 e62913573abfe5d9418f7474e95dce25 238 Pfam PF00117 Glutamine amidotransferase class-I 41 181 9.9E-13 T 12-10-2018 IPR017926 Glutamine amidotransferase PA257_0673 e62913573abfe5d9418f7474e95dce25 238 Gene3D G3DSA:3.40.50.880 1 230 4.2E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_0673 e62913573abfe5d9418f7474e95dce25 238 SUPERFAMILY SSF52317 1 187 4.16E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_5820 fc722838f4533248afced06ee678610b 87 SUPERFAMILY SSF54913 1 68 2.89E-5 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta PA257_5820 fc722838f4533248afced06ee678610b 87 Pfam PF09413 Putative prokaryotic signal transducing protein 1 63 1.7E-12 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 PA257_5399 255c87940e4ea8c1e7926da69a08adba 102 Gene3D G3DSA:1.10.3990.20 8 100 2.7E-34 T 12-10-2018 IPR038268 Ribbon-helix-helix domain superfamily PA257_5399 255c87940e4ea8c1e7926da69a08adba 102 Pfam PF13467 Ribbon-helix-helix domain 16 83 1.4E-24 T 12-10-2018 IPR027373 Ribbon-helix-helix domain PA257_1514 00101c4c4bfe86ceff43edb6df7e1c19 169 Pfam PF01584 CheW-like domain 15 153 6.1E-25 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_1514 00101c4c4bfe86ceff43edb6df7e1c19 169 SUPERFAMILY SSF50341 15 156 3.14E-25 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_1514 00101c4c4bfe86ceff43edb6df7e1c19 169 SMART SM00260 10 151 1.6E-10 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_1514 00101c4c4bfe86ceff43edb6df7e1c19 169 Gene3D G3DSA:2.40.50.180 33 105 3.7E-17 T 12-10-2018 PA257_1514 00101c4c4bfe86ceff43edb6df7e1c19 169 Gene3D G3DSA:2.30.30.40 17 120 3.7E-17 T 12-10-2018 PA257_0160 62178024022623dceeaf31bfe7472405 365 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 338 3.2E-47 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PA257_1019 2c0acece7dd1b6d577d156a08bcd79ca 388 SUPERFAMILY SSF52540 135 348 1.52E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1019 2c0acece7dd1b6d577d156a08bcd79ca 388 Pfam PF13401 AAA domain 147 283 3.1E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1019 2c0acece7dd1b6d577d156a08bcd79ca 388 Gene3D G3DSA:3.40.50.300 131 297 2.0E-7 T 12-10-2018 PA257_2611 53257da17d10901ba3b7c6474ca19ad5 183 Pfam PF01464 Transglycosylase SLT domain 23 144 1.5E-6 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 PA257_2611 53257da17d10901ba3b7c6474ca19ad5 183 SUPERFAMILY SSF53955 20 164 8.61E-16 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_2611 53257da17d10901ba3b7c6474ca19ad5 183 Gene3D G3DSA:1.10.530.10 18 182 1.2E-8 T 12-10-2018 PA257_2138 9d8ecff34df2b664f362bd657b81c67b 229 Hamap MF_00238 Cytidylate kinase [cmk]. 6 226 34.665 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 PA257_2138 9d8ecff34df2b664f362bd657b81c67b 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 220 1.4E-81 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 PA257_2138 9d8ecff34df2b664f362bd657b81c67b 229 Pfam PF02224 Cytidylate kinase 9 223 6.2E-77 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 PA257_2138 9d8ecff34df2b664f362bd657b81c67b 229 Gene3D G3DSA:3.40.50.300 2 226 7.9E-83 T 12-10-2018 PA257_2138 9d8ecff34df2b664f362bd657b81c67b 229 SUPERFAMILY SSF52540 7 223 9.46E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6679 d0f8eee8530e827093e487787e4735d1 658 Pfam PF00580 UvrD/REP helicase N-terminal domain 2 254 1.1E-69 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PA257_6679 d0f8eee8530e827093e487787e4735d1 658 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 1 657 0.0 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 PA257_6679 d0f8eee8530e827093e487787e4735d1 658 Gene3D G3DSA:1.10.10.160 98 170 7.2E-89 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily PA257_6679 d0f8eee8530e827093e487787e4735d1 658 Pfam PF13361 UvrD-like helicase C-terminal domain 260 602 1.7E-66 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PA257_6679 d0f8eee8530e827093e487787e4735d1 658 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 657 39.2 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 PA257_6679 d0f8eee8530e827093e487787e4735d1 658 SUPERFAMILY SSF52540 2 629 2.36E-160 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6679 d0f8eee8530e827093e487787e4735d1 658 Gene3D G3DSA:1.10.486.10 366 534 1.7E-120 T 12-10-2018 PA257_6679 d0f8eee8530e827093e487787e4735d1 658 Gene3D G3DSA:3.40.50.300 1 255 7.2E-89 T 12-10-2018 PA257_6679 d0f8eee8530e827093e487787e4735d1 658 Gene3D G3DSA:3.40.50.300 263 622 1.7E-120 T 12-10-2018 PA257_1422 e6994645511f97b04835c9416a9a63a9 181 Pfam PF11000 Protein of unknown function (DUF2840) 32 178 6.5E-55 T 12-10-2018 IPR021263 Protein of unknown function DUF2840 PA257_5934 6b4e98327eb99553c4bbd656ca75c4a4 235 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 233 3.6E-64 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein PA257_5934 6b4e98327eb99553c4bbd656ca75c4a4 235 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 235 56.604 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein PA257_5934 6b4e98327eb99553c4bbd656ca75c4a4 235 Gene3D G3DSA:2.40.50.580 1 80 4.3E-28 T 12-10-2018 PA257_5934 6b4e98327eb99553c4bbd656ca75c4a4 235 Pfam PF03749 Sugar fermentation stimulation protein 13 226 2.5E-72 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein PA257_5934 6b4e98327eb99553c4bbd656ca75c4a4 235 Gene3D G3DSA:3.40.1350.60 81 235 5.2E-52 T 12-10-2018 PA257_6125 40f14fb1380249dbac9e7c72a5b15b33 288 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 21 258 5.0E-15 T 12-10-2018 PA257_3490 c1cb31710cc73a168f16af55e3e11df5 455 Pfam PF01266 FAD dependent oxidoreductase 41 400 2.2E-52 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_3490 c1cb31710cc73a168f16af55e3e11df5 455 SUPERFAMILY SSF51905 39 421 1.14E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3490 c1cb31710cc73a168f16af55e3e11df5 455 Gene3D G3DSA:3.30.9.10 134 360 3.1E-61 T 12-10-2018 PA257_3490 c1cb31710cc73a168f16af55e3e11df5 455 Gene3D G3DSA:3.50.50.60 41 401 3.1E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0087 b896da09e0ed331c49a8d53b17fc00d8 91 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 80 1.2E-36 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 PA257_0087 b896da09e0ed331c49a8d53b17fc00d8 91 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 5 54 2.4E-25 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 PA257_4303 0e4b145d825a2c058febe7712c316d76 258 SMART SM01134 73 232 4.9E-63 T 12-10-2018 PA257_4303 0e4b145d825a2c058febe7712c316d76 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PA257_4303 0e4b145d825a2c058febe7712c316d76 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.6E-17 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_4303 0e4b145d825a2c058febe7712c316d76 258 SUPERFAMILY SSF100950 75 232 4.71E-26 T 12-10-2018 IPR037171 NagB/RpiA transferase-like PA257_4303 0e4b145d825a2c058febe7712c316d76 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.3E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_4303 0e4b145d825a2c058febe7712c316d76 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.3E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_4303 0e4b145d825a2c058febe7712c316d76 258 Pfam PF00455 DeoR C terminal sensor domain 75 231 2.4E-47 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain PA257_4303 0e4b145d825a2c058febe7712c316d76 258 SMART SM00420 6 58 9.2E-16 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PA257_4303 0e4b145d825a2c058febe7712c316d76 258 Gene3D G3DSA:1.10.10.10 1 54 1.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4303 0e4b145d825a2c058febe7712c316d76 258 SUPERFAMILY SSF46785 4 77 2.25E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_0633 4d3e4bdcede3d43838fc175077643249 82 Gene3D G3DSA:2.40.50.100 1 78 4.3E-22 T 12-10-2018 PA257_0633 4d3e4bdcede3d43838fc175077643249 82 Pfam PF00364 Biotin-requiring enzyme 5 78 1.4E-14 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_0633 4d3e4bdcede3d43838fc175077643249 82 SUPERFAMILY SSF51230 5 78 3.66E-18 T 12-10-2018 IPR011053 Single hybrid motif PA257_0633 4d3e4bdcede3d43838fc175077643249 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 40 53 4.4E-9 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PA257_0633 4d3e4bdcede3d43838fc175077643249 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 8 21 4.4E-9 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PA257_0633 4d3e4bdcede3d43838fc175077643249 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 25 39 4.4E-9 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PA257_2113 e4175cc08548d8ab0b8701c9298fe0ae 430 Pfam PF04966 Carbohydrate-selective porin, OprB family 56 430 1.4E-119 T 12-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 PA257_2113 e4175cc08548d8ab0b8701c9298fe0ae 430 Gene3D G3DSA:2.40.160.180 11 430 3.3E-168 T 12-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily PA257_1046 d5c54aad1dd5ca25117cf5388931a96b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 4.6E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1046 d5c54aad1dd5ca25117cf5388931a96b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 4.6E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1046 d5c54aad1dd5ca25117cf5388931a96b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.6E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1046 d5c54aad1dd5ca25117cf5388931a96b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 4.6E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1046 d5c54aad1dd5ca25117cf5388931a96b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.6E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1046 d5c54aad1dd5ca25117cf5388931a96b 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.6E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1046 d5c54aad1dd5ca25117cf5388931a96b 250 Gene3D G3DSA:3.40.50.720 1 248 6.0E-61 T 12-10-2018 PA257_1046 d5c54aad1dd5ca25117cf5388931a96b 250 SUPERFAMILY SSF51735 8 245 4.91E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_1046 d5c54aad1dd5ca25117cf5388931a96b 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 9.9E-51 T 12-10-2018 PA257_0286 e731943f11cc26924bc2a524e44bff2d 67 Pfam PF13683 Integrase core domain 1 60 4.3E-20 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_0286 e731943f11cc26924bc2a524e44bff2d 67 SUPERFAMILY SSF53098 2 64 1.14E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_1500 b2d4033e91aeffc8429de0d7bd594ad1 195 Gene3D G3DSA:1.10.10.60 1 47 2.5E-15 T 12-10-2018 PA257_1500 b2d4033e91aeffc8429de0d7bd594ad1 195 Gene3D G3DSA:1.10.357.10 53 191 4.5E-23 T 12-10-2018 PA257_1500 b2d4033e91aeffc8429de0d7bd594ad1 195 SUPERFAMILY SSF46689 2 64 8.21E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1500 b2d4033e91aeffc8429de0d7bd594ad1 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 1 14 1.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1500 b2d4033e91aeffc8429de0d7bd594ad1 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 45 1.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1500 b2d4033e91aeffc8429de0d7bd594ad1 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 47 3.8E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_1125 6fec77ce5111534bf227debb041f57da 297 Gene3D G3DSA:3.40.190.10 108 206 3.9E-20 T 12-10-2018 PA257_1125 6fec77ce5111534bf227debb041f57da 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 245 5.4E-17 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1125 6fec77ce5111534bf227debb041f57da 297 Gene3D G3DSA:3.40.190.10 34 244 3.9E-20 T 12-10-2018 PA257_1125 6fec77ce5111534bf227debb041f57da 297 SUPERFAMILY SSF53850 27 245 6.42E-35 T 12-10-2018 PA257_1407 28250b2ba17e521492da2b82bbbe8a2a 271 TIGRFAM TIGR02391 hypoth_ymh: TIGR02391 family protein 142 262 1.0E-37 T 12-10-2018 IPR012654 Conserved hypothetical protein CHP02391 PA257_1407 28250b2ba17e521492da2b82bbbe8a2a 271 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 140 260 5.8E-43 T 12-10-2018 IPR012654 Conserved hypothetical protein CHP02391 PA257_3607 83d33c65efcbddfe8081a62ea05a8a71 191 SMART SM00470 32 130 2.5E-7 T 12-10-2018 IPR003115 ParB/Sulfiredoxin PA257_3607 83d33c65efcbddfe8081a62ea05a8a71 191 Pfam PF02195 ParB-like nuclease domain 33 129 9.2E-13 T 12-10-2018 IPR003115 ParB/Sulfiredoxin PA257_3607 83d33c65efcbddfe8081a62ea05a8a71 191 SUPERFAMILY SSF110849 30 163 4.71E-19 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PA257_5105 d311c7cacb7129353f1a0a5483095a06 506 Pfam PF03929 PepSY-associated TM region 10 356 3.8E-59 T 12-10-2018 IPR005625 PepSY-associated TM protein PA257_5740 a4041d29f3bd2b2423d85998f8e74521 154 Pfam PF05981 CreA protein 23 150 2.6E-59 T 12-10-2018 IPR010292 Uncharacterised protein family CreA PA257_5740 a4041d29f3bd2b2423d85998f8e74521 154 PIRSF PIRSF003174 1 154 1.1E-69 T 12-10-2018 IPR010292 Uncharacterised protein family CreA PA257_3818 fd19e1440f7ab50ce465e449f42658f0 1281 Pfam PF02514 CobN/Magnesium Chelatase 124 1177 4.4E-288 T 12-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 PA257_3280 f039362b6ec66084d1ef2ffb1748586d 430 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 7 373 1.2E-33 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 PA257_3280 f039362b6ec66084d1ef2ffb1748586d 430 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 1 399 3.1E-69 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 PA257_0663 8be4a8745f41fc9d1c06195fe7758d8e 85 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 6 74 2.0E-12 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 PA257_5664 10e69b03b3a181c06d2bd66681ac2c7d 263 Pfam PF11679 Protein of unknown function (DUF3275) 2 206 3.2E-80 T 12-10-2018 IPR021693 Protein of unknown function DUF3275 PA257_1553 526f1b9f5eb060e575df91b016ef7f44 140 Pfam PF02657 Fe-S metabolism associated domain 15 133 1.6E-38 T 12-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like PA257_1553 526f1b9f5eb060e575df91b016ef7f44 140 SUPERFAMILY SSF82649 6 136 7.32E-43 T 12-10-2018 PA257_1553 526f1b9f5eb060e575df91b016ef7f44 140 Gene3D G3DSA:3.90.1010.10 4 139 2.0E-41 T 12-10-2018 PA257_5507 3999e4332b6b541a8a6ca2e2d4a46ef1 209 SUPERFAMILY SSF53474 7 203 3.33E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_5507 3999e4332b6b541a8a6ca2e2d4a46ef1 209 Gene3D G3DSA:3.40.50.1820 1 208 2.4E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_5507 3999e4332b6b541a8a6ca2e2d4a46ef1 209 Pfam PF00975 Thioesterase domain 88 139 3.3E-8 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 PA257_0411 33a68240f574e5c26f02d1baf32b9b49 251 Pfam PF05742 Transport and Golgi organisation 2 1 234 2.4E-57 T 12-10-2018 IPR008551 Transport and Golgi organisation protein 2 PA257_3560 c59a8347a5674da3118e7b1f3702d1a1 121 Pfam PF12021 Protein of unknown function (DUF3509) 11 79 1.2E-14 T 12-10-2018 IPR021898 Protein of unknown function DUF3509 PA257_2319 06b8f912def34b59a1cef6952b4fa835 177 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 163 2.2E-50 T 12-10-2018 IPR018639 Domain of unknown function DUF2062 PA257_1896 aa8334e8661c7c335b0339525189e242 294 Pfam PF06007 Phosphonate metabolism protein PhnJ 14 285 3.0E-145 T 12-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_1896 aa8334e8661c7c335b0339525189e242 294 PIRSF PIRSF011468 5 294 3.2E-159 T 12-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PA257_6876 41c5a7c0ab6581ca77894934407add6f 186 SUPERFAMILY SSF55729 28 169 1.44E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6876 41c5a7c0ab6581ca77894934407add6f 186 Gene3D G3DSA:3.40.630.30 23 185 1.2E-34 T 12-10-2018 PA257_0927 d41eeacd5afbea1937d4f748e40c802c 152 Gene3D G3DSA:3.40.630.30 6 149 1.9E-39 T 12-10-2018 PA257_0927 d41eeacd5afbea1937d4f748e40c802c 152 SUPERFAMILY SSF55729 9 137 8.97E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_0927 d41eeacd5afbea1937d4f748e40c802c 152 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 3.5E-17 T 12-10-2018 IPR000182 GNAT domain PA257_1316 529278bd16a783354aed7e63da559c9d 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 326 3.6E-88 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 PA257_3349 f6636041362240040837f032da39e893 321 SMART SM00567 E-Z type HEAT repeats 86 115 90.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PA257_3349 f6636041362240040837f032da39e893 321 SMART SM00567 E-Z type HEAT repeats 23 52 0.5 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PA257_3349 f6636041362240040837f032da39e893 321 SMART SM00567 E-Z type HEAT repeats 242 271 1.3E-5 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PA257_3349 f6636041362240040837f032da39e893 321 SMART SM00567 E-Z type HEAT repeats 148 177 4.5 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PA257_3349 f6636041362240040837f032da39e893 321 SMART SM00567 E-Z type HEAT repeats 117 146 1.6 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PA257_3349 f6636041362240040837f032da39e893 321 SMART SM00567 E-Z type HEAT repeats 55 84 0.0057 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PA257_3349 f6636041362240040837f032da39e893 321 SMART SM00567 E-Z type HEAT repeats 273 302 1.1 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PA257_3349 f6636041362240040837f032da39e893 321 SMART SM00567 E-Z type HEAT repeats 211 240 6.6E-8 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PA257_3349 f6636041362240040837f032da39e893 321 SMART SM00567 E-Z type HEAT repeats 180 209 0.41 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PA257_3349 f6636041362240040837f032da39e893 321 SUPERFAMILY SSF48371 63 310 6.31E-46 T 12-10-2018 IPR016024 Armadillo-type fold PA257_3349 f6636041362240040837f032da39e893 321 Gene3D G3DSA:1.25.10.10 173 321 2.7E-31 T 12-10-2018 IPR011989 Armadillo-like helical PA257_3349 f6636041362240040837f032da39e893 321 Gene3D G3DSA:1.25.10.10 4 172 1.2E-26 T 12-10-2018 IPR011989 Armadillo-like helical PA257_3349 f6636041362240040837f032da39e893 321 Pfam PF13646 HEAT repeats 231 315 1.1E-14 T 12-10-2018 PA257_3349 f6636041362240040837f032da39e893 321 Pfam PF13646 HEAT repeats 138 221 2.1E-14 T 12-10-2018 PA257_3349 f6636041362240040837f032da39e893 321 Pfam PF13646 HEAT repeats 14 97 5.3E-13 T 12-10-2018 PA257_2726 622703d7bf93ba2ea1aa0543c0b94b5a 209 Pfam PF00182 Chitinase class I 114 167 2.1E-6 T 12-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 PA257_2726 622703d7bf93ba2ea1aa0543c0b94b5a 209 Gene3D G3DSA:1.10.530.70 22 208 3.6E-23 T 12-10-2018 PA257_2726 622703d7bf93ba2ea1aa0543c0b94b5a 209 SUPERFAMILY SSF53955 1 208 1.66E-49 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_2751 4ab1c49aad8e69cdb7c669d232d2a4f4 132 PIRSF PIRSF029543 1 131 4.1E-58 T 12-10-2018 IPR016924 Uncharacterised conserved protein UCP029543 PA257_1562 2a65c7b592d35c4925803bcb88ca5d31 402 Pfam PF00155 Aminotransferase class I and II 32 395 5.7E-44 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PA257_1562 2a65c7b592d35c4925803bcb88ca5d31 402 Gene3D G3DSA:3.40.640.10 43 296 3.4E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_1562 2a65c7b592d35c4925803bcb88ca5d31 402 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 398 2.4E-202 T 12-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 PA257_1562 2a65c7b592d35c4925803bcb88ca5d31 402 SUPERFAMILY SSF53383 2 400 9.08E-89 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_1562 2a65c7b592d35c4925803bcb88ca5d31 402 Gene3D G3DSA:3.90.1150.10 13 387 3.4E-115 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_3749 03e0c62081cffffec1f36253802a0413 608 Gene3D G3DSA:3.40.50.1820 341 606 3.9E-70 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3749 03e0c62081cffffec1f36253802a0413 608 Pfam PF00326 Prolyl oligopeptidase family 399 606 3.6E-37 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PA257_3749 03e0c62081cffffec1f36253802a0413 608 SUPERFAMILY SSF82171 68 294 1.37E-5 T 12-10-2018 PA257_3749 03e0c62081cffffec1f36253802a0413 608 SUPERFAMILY SSF53474 350 602 2.54E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0405 77e0bd2083c4a787ccb1090b21723f62 155 Pfam PF10027 Predicted integral membrane protein (DUF2269) 5 154 6.3E-60 T 12-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane PA257_5412 4d4854571d6a00e9b009fa274398efd5 261 Gene3D G3DSA:3.60.15.10 3 242 5.5E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_5412 4d4854571d6a00e9b009fa274398efd5 261 SUPERFAMILY SSF56281 12 243 8.65E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PA257_5412 4d4854571d6a00e9b009fa274398efd5 261 SMART SM00849 29 225 3.7E-22 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_5412 4d4854571d6a00e9b009fa274398efd5 261 Pfam PF00753 Metallo-beta-lactamase superfamily 27 225 2.2E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase PA257_6022 299bb010a32c16051bbc2dda478a7aa9 69 SUPERFAMILY SSF47413 10 63 6.68E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_6022 299bb010a32c16051bbc2dda478a7aa9 69 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 8 62 3.4E-27 T 12-10-2018 IPR026365 Phage-associated protein, BcepMu gp16 family PA257_4470 fd78aa19772f39eaeb6a64e88029b7e1 135 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 4 116 3.1E-9 T 12-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 PA257_4470 fd78aa19772f39eaeb6a64e88029b7e1 135 SUPERFAMILY SSF54427 5 122 1.21E-27 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_4470 fd78aa19772f39eaeb6a64e88029b7e1 135 Gene3D G3DSA:3.10.450.50 2 133 8.5E-35 T 12-10-2018 PA257_4470 fd78aa19772f39eaeb6a64e88029b7e1 135 Pfam PF13474 SnoaL-like domain 14 113 1.1E-9 T 12-10-2018 IPR037401 SnoaL-like domain PA257_1733 216e44a7d0841ce6f19b6c1adf898564 391 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 85 355 6.9E-100 T 12-10-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain PA257_2873 c9f0d96b854adec331d2bba6c7af9561 250 Gene3D G3DSA:3.40.50.150 20 245 2.1E-84 T 12-10-2018 PA257_2873 c9f0d96b854adec331d2bba6c7af9561 250 SUPERFAMILY SSF53335 1 196 3.16E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2873 c9f0d96b854adec331d2bba6c7af9561 250 Gene3D G3DSA:1.10.10.2560 136 235 2.1E-84 T 12-10-2018 PA257_2873 c9f0d96b854adec331d2bba6c7af9561 250 Pfam PF08241 Methyltransferase domain 42 130 1.2E-16 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PA257_5203 9be1da937cfd40a2d1fc96a3b14e69e2 232 Pfam PF11679 Protein of unknown function (DUF3275) 14 225 7.0E-93 T 12-10-2018 IPR021693 Protein of unknown function DUF3275 PA257_5921 1dd63787fd3b628e746bfcf17e849ee1 354 Pfam PF05171 Haemin-degrading HemS.ChuX domain 38 167 2.2E-42 T 12-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 PA257_5921 1dd63787fd3b628e746bfcf17e849ee1 354 Pfam PF05171 Haemin-degrading HemS.ChuX domain 220 351 1.7E-42 T 12-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 PA257_5921 1dd63787fd3b628e746bfcf17e849ee1 354 Gene3D G3DSA:3.40.1570.10 91 347 2.0E-150 T 12-10-2018 PA257_5921 1dd63787fd3b628e746bfcf17e849ee1 354 Gene3D G3DSA:3.40.1570.10 17 294 2.0E-150 T 12-10-2018 PA257_5921 1dd63787fd3b628e746bfcf17e849ee1 354 SUPERFAMILY SSF144064 14 351 3.24E-126 T 12-10-2018 PA257_5953 ed6cb0d3e417c58befec829429760ef5 114 SMART SM00749 50 113 7.1E-10 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria PA257_5953 ed6cb0d3e417c58befec829429760ef5 114 Pfam PF04972 BON domain 45 107 2.4E-18 T 12-10-2018 IPR007055 BON domain PA257_3292 1997550641222088793561337fed9c68 375 SUPERFAMILY SSF51695 41 357 2.62E-59 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PA257_3292 1997550641222088793561337fed9c68 375 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 48 351 3.2E-35 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PA257_3292 1997550641222088793561337fed9c68 375 Gene3D G3DSA:3.20.20.190 37 358 5.6E-75 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PA257_1930 1b5f01e6e04daf9f8893278bffc47d6c 116 SUPERFAMILY SSF47226 3 113 4.84E-26 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_1930 1b5f01e6e04daf9f8893278bffc47d6c 116 Gene3D G3DSA:1.20.120.160 1 110 5.8E-25 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 PA257_1930 1b5f01e6e04daf9f8893278bffc47d6c 116 Pfam PF01627 Hpt domain 25 100 1.6E-14 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PA257_5350 ea576d4c5a5cbe0060f531544523a7e4 401 Pfam PF02417 Chromate transporter 13 177 5.8E-34 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 PA257_5350 ea576d4c5a5cbe0060f531544523a7e4 401 Pfam PF02417 Chromate transporter 228 394 1.8E-40 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 PA257_5350 ea576d4c5a5cbe0060f531544523a7e4 401 PIRSF PIRSF004810 2 400 4.8E-130 T 12-10-2018 IPR014047 Chromate transporter, long chain PA257_5350 ea576d4c5a5cbe0060f531544523a7e4 401 TIGRFAM TIGR00937 2A51: chromate efflux transporter 18 394 8.4E-103 T 12-10-2018 IPR014047 Chromate transporter, long chain PA257_6137 e877d5206ca44984a72d62dbf0224ff6 359 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 44 352 8.3E-134 T 12-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC PA257_6137 e877d5206ca44984a72d62dbf0224ff6 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 341 8.7E-42 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PA257_6617 09b02508b4446bef68a4bc20fbbd606d 358 Pfam PF06580 Histidine kinase 163 241 6.1E-23 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 PA257_5055 54143fa80535decf3ea88bb74a0f1e21 206 SUPERFAMILY SSF52540 43 185 2.05E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5055 54143fa80535decf3ea88bb74a0f1e21 206 Gene3D G3DSA:3.40.50.300 6 189 2.0E-38 T 12-10-2018 PA257_5055 54143fa80535decf3ea88bb74a0f1e21 206 SMART SM00382 60 188 6.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5055 54143fa80535decf3ea88bb74a0f1e21 206 Pfam PF01695 IstB-like ATP binding protein 59 182 1.7E-16 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 PA257_4437 537fe15e7803afacb69f1a2f4494f70b 141 Gene3D G3DSA:3.30.70.1060 1 117 6.0E-35 T 12-10-2018 PA257_4437 537fe15e7803afacb69f1a2f4494f70b 141 SUPERFAMILY SSF54909 1 118 4.83E-37 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_4437 537fe15e7803afacb69f1a2f4494f70b 141 Pfam PF03795 YCII-related domain 1 114 2.9E-31 T 12-10-2018 IPR005545 YCII-related PA257_6866 37efecf2b84c1b6d07a2f2fa5141d99d 321 Gene3D G3DSA:1.20.1530.20 178 320 1.4E-6 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_6866 37efecf2b84c1b6d07a2f2fa5141d99d 321 Pfam PF03547 Membrane transport protein 172 306 5.4E-8 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 PA257_2562 bbf965cd06ad99560fd7fe4c78632a5b 144 SUPERFAMILY SSF56524 1 142 5.23E-47 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_2562 bbf965cd06ad99560fd7fe4c78632a5b 144 Pfam PF00174 Oxidoreductase molybdopterin binding domain 3 124 9.0E-30 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PA257_2562 bbf965cd06ad99560fd7fe4c78632a5b 144 Gene3D G3DSA:3.90.420.10 1 144 4.4E-35 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_5867 48d50cc1b7f318b3414767e622139608 82 Pfam PF05356 Phage Coat protein B 1 82 1.1E-50 T 12-10-2018 IPR008020 Capsid protein G8P PA257_5867 48d50cc1b7f318b3414767e622139608 82 SUPERFAMILY SSF57987 37 82 7.05E-21 T 12-10-2018 PA257_5867 48d50cc1b7f318b3414767e622139608 82 ProDom PD059964 COAT CAPSID B PA0723 3D-STRUCTURE MAJOR TRANSMEMBRANE MEMBRANE DIRECT PRECURSOR 1 82 6.0E-40 T 12-10-2018 IPR008020 Capsid protein G8P PA257_5867 48d50cc1b7f318b3414767e622139608 82 Gene3D G3DSA:1.20.5.230 37 82 3.8E-26 T 12-10-2018 PA257_1847 df8fbcb008271aa9ba8dbc63121e1a2a 468 SUPERFAMILY SSF51905 3 307 1.38E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1847 df8fbcb008271aa9ba8dbc63121e1a2a 468 Gene3D G3DSA:3.30.9.10 125 354 1.2E-59 T 12-10-2018 PA257_1847 df8fbcb008271aa9ba8dbc63121e1a2a 468 Gene3D G3DSA:3.50.50.60 31 394 1.2E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1847 df8fbcb008271aa9ba8dbc63121e1a2a 468 Pfam PF01266 FAD dependent oxidoreductase 31 393 6.5E-48 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_3685 d8f6e0dc7c834389c36b52f8407ead17 98 Gene3D G3DSA:3.30.70.100 5 95 7.9E-12 T 12-10-2018 PA257_3685 d8f6e0dc7c834389c36b52f8407ead17 98 SUPERFAMILY SSF54909 10 89 8.23E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_3685 d8f6e0dc7c834389c36b52f8407ead17 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 11 80 2.2E-13 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PA257_5804 7688a0d518492d1bf99a8c62a4afefa8 943 Gene3D G3DSA:3.30.365.10 29 607 1.1E-60 T 12-10-2018 PA257_5804 7688a0d518492d1bf99a8c62a4afefa8 943 SUPERFAMILY SSF54665 52 174 4.53E-12 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily PA257_5804 7688a0d518492d1bf99a8c62a4afefa8 943 Gene3D G3DSA:3.30.365.10 760 942 4.0E-40 T 12-10-2018 PA257_5804 7688a0d518492d1bf99a8c62a4afefa8 943 SUPERFAMILY SSF56003 264 942 1.7E-122 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PA257_5804 7688a0d518492d1bf99a8c62a4afefa8 943 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 690 881 1.9E-16 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_5804 7688a0d518492d1bf99a8c62a4afefa8 943 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 265 602 1.3E-52 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PA257_3731 a578ef2741f2ca8dbd5888335dea23ee 432 Gene3D G3DSA:2.30.30.230 1 117 3.4E-28 T 12-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 PA257_3731 a578ef2741f2ca8dbd5888335dea23ee 432 SUPERFAMILY SSF56529 121 426 1.83E-94 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_3731 a578ef2741f2ca8dbd5888335dea23ee 432 Pfam PF09298 Fumarylacetoacetase N-terminal 23 119 2.6E-22 T 12-10-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 PA257_3731 a578ef2741f2ca8dbd5888335dea23ee 432 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 9 426 1.3E-209 T 12-10-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 PA257_3731 a578ef2741f2ca8dbd5888335dea23ee 432 Gene3D G3DSA:3.90.850.10 118 428 7.1E-120 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_3731 a578ef2741f2ca8dbd5888335dea23ee 432 SUPERFAMILY SSF63433 8 119 2.48E-29 T 12-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 PA257_3731 a578ef2741f2ca8dbd5888335dea23ee 432 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 125 423 7.7E-58 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PA257_6482 a7831a7c115f9f2ba8edaec33aaaf53e 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 3.7E-52 T 12-10-2018 IPR006498 Tail tube protein PA257_6482 a7831a7c115f9f2ba8edaec33aaaf53e 171 Pfam PF04985 Phage tail tube protein FII 4 170 7.2E-62 T 12-10-2018 IPR006498 Tail tube protein PA257_3494 ac92e42938ba863a8d13ebab8699cebe 291 Gene3D G3DSA:3.40.50.1820 10 287 4.8E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3494 ac92e42938ba863a8d13ebab8699cebe 291 SUPERFAMILY SSF53474 8 276 6.68E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3494 ac92e42938ba863a8d13ebab8699cebe 291 Pfam PF00561 alpha/beta hydrolase fold 26 273 2.8E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_5847 ebb018dcdc515346be203367494fbafd 173 SUPERFAMILY SSF56925 33 147 6.54E-6 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PA257_5847 ebb018dcdc515346be203367494fbafd 173 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 37 171 2.4E-41 T 12-10-2018 IPR018550 Lipid A 3-O-deacylase-related PA257_5847 ebb018dcdc515346be203367494fbafd 173 Gene3D G3DSA:2.40.160.20 24 173 1.9E-62 T 12-10-2018 PA257_5847 ebb018dcdc515346be203367494fbafd 173 PIRSF PIRSF029681 1 173 9.1E-54 T 12-10-2018 IPR018550 Lipid A 3-O-deacylase-related PA257_6653 927bf05a45470ed5551ec655eab086eb 189 Pfam PF13289 SIR2-like domain 28 169 5.9E-24 T 12-10-2018 IPR039444 SIR2-like domain PA257_6653 927bf05a45470ed5551ec655eab086eb 189 SUPERFAMILY SSF52467 15 138 4.47E-7 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PA257_6653 927bf05a45470ed5551ec655eab086eb 189 PIRSF PIRSF033541 1 188 2.6E-81 T 12-10-2018 IPR014583 Uncharacterised protein family, Sir2-like PA257_0978 ec910b6fbe045e9c2450b673e0f9c963 219 SUPERFAMILY SSF56529 11 217 6.8E-61 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_0978 ec910b6fbe045e9c2450b673e0f9c963 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 14 216 5.2E-51 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PA257_0978 ec910b6fbe045e9c2450b673e0f9c963 219 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 11 216 6.3E-96 T 12-10-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 PA257_0978 ec910b6fbe045e9c2450b673e0f9c963 219 Gene3D G3DSA:3.90.850.10 9 219 4.0E-61 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PA257_5361 9217e8e8e10d704dd4fadd5d9d32775b 303 Pfam PF00482 Type II secretion system (T2SS), protein F 159 287 3.1E-15 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_0744 eb089b75344aa49203e1cc496e1c5e26 933 Pfam PF04453 Organic solvent tolerance protein 403 840 3.4E-118 T 12-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 PA257_0744 eb089b75344aa49203e1cc496e1c5e26 933 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 15 908 20.727 T 12-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 PA257_0744 eb089b75344aa49203e1cc496e1c5e26 933 Gene3D G3DSA:2.60.450.10 151 258 1.1E-7 T 12-10-2018 PA257_0744 eb089b75344aa49203e1cc496e1c5e26 933 Pfam PF03968 OstA-like protein 158 291 6.4E-11 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal PA257_6288 91cee88dacbc47da6df048029c480800 294 Gene3D G3DSA:3.90.550.10 3 256 2.0E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6288 91cee88dacbc47da6df048029c480800 294 SUPERFAMILY SSF53448 8 225 1.22E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_6288 91cee88dacbc47da6df048029c480800 294 Pfam PF00535 Glycosyl transferase family 2 13 180 1.3E-29 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_4049 8900b6276825539b9a73d1415eb5ab1d 214 Pfam PF02108 Flagellar assembly protein FliH 74 194 6.0E-17 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PA257_4049 8900b6276825539b9a73d1415eb5ab1d 214 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 3.9E-40 T 12-10-2018 IPR012842 Type III secretion system HrpE/YscL PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 PIRSF PIRSF016578 4 194 1.9E-13 T 12-10-2018 PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 PIRSF PIRSF016578 217 375 9.8E-12 T 12-10-2018 PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 SUPERFAMILY SSF47203 225 375 6.93E-58 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 Gene3D G3DSA:1.10.540.10 2 118 1.1E-44 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 Gene3D G3DSA:2.40.110.10 119 232 9.0E-43 T 12-10-2018 PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 SUPERFAMILY SSF56645 5 240 1.18E-84 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 Gene3D G3DSA:1.20.140.10 233 375 3.2E-55 T 12-10-2018 PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 2.6E-51 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 115 1.9E-37 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PA257_3016 b6ffbafa1970a9fe1756e8517278f1cc 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 3.1E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PA257_5801 d99c1b141f181badc755d88f9f5a87ec 323 Gene3D G3DSA:3.40.50.720 168 317 1.2E-37 T 12-10-2018 PA257_5801 d99c1b141f181badc755d88f9f5a87ec 323 Pfam PF02625 XdhC and CoxI family 19 69 1.1E-14 T 12-10-2018 IPR003777 XdhC- CoxI PA257_5801 d99c1b141f181badc755d88f9f5a87ec 323 Pfam PF13478 XdhC Rossmann domain 169 311 7.1E-35 T 12-10-2018 IPR027051 XdhC Rossmann domain PA257_1195 6a013ce210ece2afc16a0113f8902cd8 244 Gene3D G3DSA:3.40.190.10 38 238 1.0E-13 T 12-10-2018 PA257_1195 6a013ce210ece2afc16a0113f8902cd8 244 Gene3D G3DSA:3.40.190.10 115 206 1.0E-13 T 12-10-2018 PA257_1195 6a013ce210ece2afc16a0113f8902cd8 244 SUPERFAMILY SSF53850 32 238 5.43E-23 T 12-10-2018 PA257_1690 8c8b34a972bc4199f3f7db30ab25fb2f 112 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 21 87 6.0E-27 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC PA257_1690 8c8b34a972bc4199f3f7db30ab25fb2f 112 Pfam PF06942 GlpM protein 5 111 1.2E-49 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC PA257_3373 cf3347d996e404fd25e7fba784904cbb 171 Gene3D G3DSA:3.40.630.30 1 152 1.6E-24 T 12-10-2018 PA257_3373 cf3347d996e404fd25e7fba784904cbb 171 Pfam PF13673 Acetyltransferase (GNAT) domain 49 139 1.3E-12 T 12-10-2018 IPR000182 GNAT domain PA257_3373 cf3347d996e404fd25e7fba784904cbb 171 SUPERFAMILY SSF55729 1 138 2.4E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_2532 06b5c87550b3a5ce9395adafc012da7e 202 Gene3D G3DSA:3.90.420.10 22 201 1.7E-32 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_2532 06b5c87550b3a5ce9395adafc012da7e 202 SUPERFAMILY SSF56524 10 201 3.53E-52 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_2532 06b5c87550b3a5ce9395adafc012da7e 202 Pfam PF00174 Oxidoreductase molybdopterin binding domain 35 181 4.5E-26 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PA257_3406 a428c1576bd09e4a8132e6291f65297a 469 Pfam PF03023 MviN-like protein 30 443 5.1E-42 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_3406 a428c1576bd09e4a8132e6291f65297a 469 PRINTS PR01806 Virulence factor MviN signature 50 66 2.3E-10 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_3406 a428c1576bd09e4a8132e6291f65297a 469 PRINTS PR01806 Virulence factor MviN signature 419 436 2.3E-10 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_3406 a428c1576bd09e4a8132e6291f65297a 469 PRINTS PR01806 Virulence factor MviN signature 31 50 2.3E-10 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_3406 a428c1576bd09e4a8132e6291f65297a 469 PRINTS PR01806 Virulence factor MviN signature 248 274 2.3E-10 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PA257_5439 7684e0a8e272dbb6bdce47270d9d8c31 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 269 1.0E-34 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_5439 7684e0a8e272dbb6bdce47270d9d8c31 376 Gene3D G3DSA:2.40.30.170 59 279 1.6E-74 T 12-10-2018 PA257_5439 7684e0a8e272dbb6bdce47270d9d8c31 376 Gene3D G3DSA:2.40.420.20 280 364 1.6E-74 T 12-10-2018 PA257_5439 7684e0a8e272dbb6bdce47270d9d8c31 376 SUPERFAMILY SSF111369 60 273 4.05E-45 T 12-10-2018 PA257_5439 7684e0a8e272dbb6bdce47270d9d8c31 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 366 2.3E-79 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_5439 7684e0a8e272dbb6bdce47270d9d8c31 376 Gene3D G3DSA:1.10.287.470 103 162 1.6E-74 T 12-10-2018 PA257_5439 7684e0a8e272dbb6bdce47270d9d8c31 376 Gene3D G3DSA:2.40.50.100 68 196 1.6E-74 T 12-10-2018 PA257_6480 74fafbe1c167dd1c49ddc759a780a622 144 Pfam PF16778 Phage tail assembly chaperone protein 72 136 1.1E-9 T 12-10-2018 IPR031893 Phage tail assembly chaperone protein PA257_5720 fa6ae1f2ea2bd43fe64f4296d04f4132 341 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 241 40.593 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD PA257_5720 fa6ae1f2ea2bd43fe64f4296d04f4132 341 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 245 2.8E-86 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD PA257_5720 fa6ae1f2ea2bd43fe64f4296d04f4132 341 Gene3D G3DSA:1.25.40.10 30 252 1.3E-56 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_5720 fa6ae1f2ea2bd43fe64f4296d04f4132 341 Pfam PF13525 Outer membrane lipoprotein 29 233 2.4E-80 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like PA257_0029 e0adbf0c836c3cd09f6fb730e80ecdfb 341 SMART SM00257 30 78 0.0023 T 12-10-2018 IPR018392 LysM domain PA257_0029 e0adbf0c836c3cd09f6fb730e80ecdfb 341 SUPERFAMILY SSF54106 30 77 3.4E-7 T 12-10-2018 PA257_0029 e0adbf0c836c3cd09f6fb730e80ecdfb 341 Gene3D G3DSA:3.10.350.10 30 76 1.4E-14 T 12-10-2018 IPR036779 LysM domain superfamily PA257_0029 e0adbf0c836c3cd09f6fb730e80ecdfb 341 Pfam PF01476 LysM domain 31 76 5.6E-13 T 12-10-2018 IPR018392 LysM domain PA257_2502 6a571f5382c9c8d1323024795970216e 111 Pfam PF01527 Transposase 5 82 2.8E-13 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_2502 6a571f5382c9c8d1323024795970216e 111 SUPERFAMILY SSF46689 6 101 5.73E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2502 6a571f5382c9c8d1323024795970216e 111 Gene3D G3DSA:1.10.10.60 11 96 5.9E-9 T 12-10-2018 PA257_4670 85054de1cec7bb5a8b827ea7fe3517cd 282 Pfam PF00188 Cysteine-rich secretory protein family 152 279 4.3E-20 T 12-10-2018 IPR014044 CAP domain PA257_4670 85054de1cec7bb5a8b827ea7fe3517cd 282 Gene3D G3DSA:3.40.33.10 143 280 3.6E-41 T 12-10-2018 IPR035940 CAP superfamily PA257_4670 85054de1cec7bb5a8b827ea7fe3517cd 282 SUPERFAMILY SSF55797 145 280 2.62E-22 T 12-10-2018 IPR035940 CAP superfamily PA257_5118 954cb16192e1efcb32957bbb25c62912 221 Pfam PF13847 Methyltransferase domain 49 153 3.2E-13 T 12-10-2018 IPR025714 Methyltransferase domain PA257_5118 954cb16192e1efcb32957bbb25c62912 221 Gene3D G3DSA:3.40.50.150 1 218 4.4E-66 T 12-10-2018 PA257_5118 954cb16192e1efcb32957bbb25c62912 221 SUPERFAMILY SSF53335 3 199 9.49E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6108 876dee3149c1b10cd6d0ce88bf97d77c 284 SUPERFAMILY SSF103481 182 282 1.83E-15 T 12-10-2018 PA257_6108 876dee3149c1b10cd6d0ce88bf97d77c 284 SUPERFAMILY SSF103481 42 139 5.1E-13 T 12-10-2018 PA257_6108 876dee3149c1b10cd6d0ce88bf97d77c 284 Pfam PF00892 EamA-like transporter family 8 138 9.2E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_6108 876dee3149c1b10cd6d0ce88bf97d77c 284 Pfam PF00892 EamA-like transporter family 151 279 3.0E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_6734 ffe24c214affeab2dbfc90d10437fe4a 130 Gene3D G3DSA:3.30.1050.10 10 124 7.9E-12 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PA257_6734 ffe24c214affeab2dbfc90d10437fe4a 130 SUPERFAMILY SSF55718 11 116 4.71E-5 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PA257_2424 13c86d4ae4a1f801f7a8a7e36ae7b443 600 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 7 348 2.3E-127 T 12-10-2018 IPR010839 Acyclic terpene utilisation PA257_0916 225a446ebc71f7be5f3be679f2ceaee7 133 SUPERFAMILY SSF51316 1 132 2.51E-44 T 12-10-2018 IPR011057 Mss4-like superfamily PA257_0916 225a446ebc71f7be5f3be679f2ceaee7 133 Gene3D G3DSA:3.90.1590.10 1 121 2.3E-18 T 12-10-2018 PA257_0916 225a446ebc71f7be5f3be679f2ceaee7 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 112 4.8E-17 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PA257_1646 dfe8630bef4a0836ee08dccc95b7f000 41 Pfam PF05489 Phage Tail Protein X 1 31 6.9E-7 T 12-10-2018 IPR008861 Phage Tail Protein X-like PA257_1646 dfe8630bef4a0836ee08dccc95b7f000 41 Gene3D G3DSA:3.10.350.10 1 41 6.4E-9 T 12-10-2018 IPR036779 LysM domain superfamily PA257_3481 9e3913e5ab3f1bca030465c14fb813a6 87 Pfam PF01527 Transposase 2 70 1.5E-22 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_3481 9e3913e5ab3f1bca030465c14fb813a6 87 SUPERFAMILY SSF46689 2 68 7.7E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_1783 98bae6285402c13898be42456b36411b 145 Gene3D G3DSA:3.40.1000.60 23 145 2.2E-83 T 12-10-2018 PA257_1744 6b909ce0db5b92674e6970e478797816 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.721 T 12-10-2018 IPR005583 Peroxide stress protein YaaA PA257_1744 6b909ce0db5b92674e6970e478797816 259 Pfam PF03883 Peroxide stress protein YaaA 1 243 5.7E-90 T 12-10-2018 IPR005583 Peroxide stress protein YaaA PA257_5124 082e3322ffa08c5bbdbac3fc8d64afed 305 Gene3D G3DSA:3.40.190.10 163 260 8.9E-39 T 12-10-2018 PA257_5124 082e3322ffa08c5bbdbac3fc8d64afed 305 Gene3D G3DSA:3.40.190.10 102 288 8.9E-39 T 12-10-2018 PA257_5124 082e3322ffa08c5bbdbac3fc8d64afed 305 Gene3D G3DSA:1.10.10.10 5 92 6.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5124 082e3322ffa08c5bbdbac3fc8d64afed 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.5E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5124 082e3322ffa08c5bbdbac3fc8d64afed 305 SUPERFAMILY SSF53850 83 293 4.34E-31 T 12-10-2018 PA257_5124 082e3322ffa08c5bbdbac3fc8d64afed 305 SUPERFAMILY SSF46785 3 86 4.65E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5124 082e3322ffa08c5bbdbac3fc8d64afed 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5124 082e3322ffa08c5bbdbac3fc8d64afed 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5124 082e3322ffa08c5bbdbac3fc8d64afed 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5124 082e3322ffa08c5bbdbac3fc8d64afed 305 Pfam PF03466 LysR substrate binding domain 89 289 6.4E-26 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_4499 39eb78c5e7bede4df3dde134ab513b25 91 Pfam PF02583 Metal-sensitive transcriptional repressor 8 86 4.7E-22 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 PA257_4499 39eb78c5e7bede4df3dde134ab513b25 91 Gene3D G3DSA:1.20.58.1000 1 91 9.1E-30 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily PA257_1441 a2db41a7ddd41f9d68fd1db017623e38 245 SUPERFAMILY SSF101082 29 207 3.53E-5 T 12-10-2018 PA257_1441 a2db41a7ddd41f9d68fd1db017623e38 245 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 5 243 1.6E-73 T 12-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ PA257_1451 ab2b252a43bef20d36064b47cc9e073a 418 Gene3D G3DSA:1.20.1740.10 23 416 5.3E-12 T 12-10-2018 PA257_1451 ab2b252a43bef20d36064b47cc9e073a 418 PIRSF PIRSF006060 10 418 2.5E-10 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_1451 ab2b252a43bef20d36064b47cc9e073a 418 Pfam PF03222 Tryptophan/tyrosine permease family 29 382 1.2E-28 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 PA257_6462 ff9a0d3c92c7574921018d400140d82e 351 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 60 337 2.3E-63 T 12-10-2018 IPR006430 Phage portal protein PBSX family PA257_6462 ff9a0d3c92c7574921018d400140d82e 351 PIRSF PIRSF018494 1 351 1.1E-152 T 12-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria PA257_1589 9d967f9019d28f375d7fc8f41695c385 82 Pfam PF01206 Sulfurtransferase TusA 11 77 2.8E-18 T 12-10-2018 IPR001455 TusA-like domain PA257_1589 9d967f9019d28f375d7fc8f41695c385 82 SUPERFAMILY SSF64307 5 77 3.79E-20 T 12-10-2018 IPR036868 TusA-like domain superfamily PA257_1589 9d967f9019d28f375d7fc8f41695c385 82 Gene3D G3DSA:3.30.110.40 7 77 6.5E-23 T 12-10-2018 IPR036868 TusA-like domain superfamily PA257_2180 2ffafa9ec15e79c356b2a6e10af41e43 336 SMART SM00859 6 120 2.4E-22 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PA257_2180 2ffafa9ec15e79c356b2a6e10af41e43 336 SUPERFAMILY SSF51735 5 154 6.27E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2180 2ffafa9ec15e79c356b2a6e10af41e43 336 PIRSF PIRSF000148 4 336 2.8E-86 T 12-10-2018 PA257_2180 2ffafa9ec15e79c356b2a6e10af41e43 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 318 3.9E-33 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PA257_2180 2ffafa9ec15e79c356b2a6e10af41e43 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 118 1.0E-23 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PA257_2180 2ffafa9ec15e79c356b2a6e10af41e43 336 Gene3D G3DSA:3.30.360.10 131 314 7.2E-116 T 12-10-2018 PA257_2180 2ffafa9ec15e79c356b2a6e10af41e43 336 Gene3D G3DSA:3.40.50.720 7 331 7.2E-116 T 12-10-2018 PA257_2180 2ffafa9ec15e79c356b2a6e10af41e43 336 SUPERFAMILY SSF55347 135 319 1.47E-47 T 12-10-2018 PA257_3149 e9de721b8d20cdb1040874d992bea824 428 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 62 192 8.0E-21 T 12-10-2018 IPR006528 Phage head morphogenesis domain PA257_3149 e9de721b8d20cdb1040874d992bea824 428 Pfam PF04233 Phage Mu protein F like protein 59 189 1.1E-32 T 12-10-2018 IPR006528 Phage head morphogenesis domain PA257_1640 f7fc57171b0c8d03e25b6ce0c5138fcf 386 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 106 272 7.5E-34 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain PA257_1640 f7fc57171b0c8d03e25b6ce0c5138fcf 386 Pfam PF17482 Phage tail sheath C-terminal domain 273 375 5.7E-20 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain PA257_2813 f6b3a99b0ba6e7069ec007369e3ce6f3 193 SUPERFAMILY SSF53098 101 151 6.07E-8 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_2813 f6b3a99b0ba6e7069ec007369e3ce6f3 193 Pfam PF13276 HTH-like domain 39 91 5.0E-12 T 12-10-2018 IPR025948 HTH-like domain PA257_0272 3099c1f9f66af573283a2fa2e540345a 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_0272 3099c1f9f66af573283a2fa2e540345a 148 Pfam PF01220 Dehydroquinase class II 5 140 1.2E-61 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_0272 3099c1f9f66af573283a2fa2e540345a 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 142 6.6E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_0272 3099c1f9f66af573283a2fa2e540345a 148 Gene3D G3DSA:3.40.50.9100 1 147 4.5E-66 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_0272 3099c1f9f66af573283a2fa2e540345a 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 142 2.0E-61 T 12-10-2018 PA257_0272 3099c1f9f66af573283a2fa2e540345a 148 PIRSF PIRSF001399 1 147 3.2E-63 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_0272 3099c1f9f66af573283a2fa2e540345a 148 SUPERFAMILY SSF52304 4 145 1.27E-62 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_0272 3099c1f9f66af573283a2fa2e540345a 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 73.13 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PA257_4050 98e2808e3c4768bf479bb63262988b80 206 Pfam PF06578 YOP proteins translocation protein K (YscK) 3 206 5.8E-91 T 12-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 PA257_4050 98e2808e3c4768bf479bb63262988b80 206 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 1 206 5.0E-99 T 12-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 PA257_0417 f70296c646e5cf5f14e44fcb800ebdb9 459 Pfam PF11981 Domain of unknown function (DUF3482) 165 450 1.8E-109 T 12-10-2018 IPR021871 Protein of unknown function DUF3482 PA257_0417 f70296c646e5cf5f14e44fcb800ebdb9 459 SUPERFAMILY SSF52540 4 168 7.5E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0417 f70296c646e5cf5f14e44fcb800ebdb9 459 Gene3D G3DSA:3.40.50.300 2 182 8.8E-25 T 12-10-2018 PA257_0417 f70296c646e5cf5f14e44fcb800ebdb9 459 Pfam PF01926 50S ribosome-binding GTPase 8 152 1.0E-15 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 PA257_2186 f2023fcd7be0b169d366d5fb53e58db9 217 Pfam PF05036 Sporulation related domain 141 211 1.3E-17 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 PA257_2186 f2023fcd7be0b169d366d5fb53e58db9 217 Gene3D G3DSA:3.30.70.1070 135 211 1.7E-14 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_2186 f2023fcd7be0b169d366d5fb53e58db9 217 SUPERFAMILY SSF110997 141 213 2.09E-18 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_6510 b6c5a5f5fed32ac7fc6b00b523588df0 518 SUPERFAMILY SSF52540 52 238 8.91E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1828 1df10065ac59f0982ce5e688fbde8c29 262 Gene3D G3DSA:1.10.3720.10 51 247 4.8E-29 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1828 1df10065ac59f0982ce5e688fbde8c29 262 SUPERFAMILY SSF161098 55 236 1.11E-36 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1828 1df10065ac59f0982ce5e688fbde8c29 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 245 1.8E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0357 6bb206f5691c8e003a14819d12801c18 460 Pfam PF03573 outer membrane porin, OprD family 30 458 7.7E-154 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_0357 6bb206f5691c8e003a14819d12801c18 460 Gene3D G3DSA:2.40.160.10 35 460 1.1E-192 T 12-10-2018 IPR023614 Porin domain superfamily PA257_3318 908affbd10e2969df05321a492f0b312 582 Gene3D G3DSA:3.40.605.10 109 542 5.0E-103 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_3318 908affbd10e2969df05321a492f0b312 582 Gene3D G3DSA:3.40.309.10 330 521 5.0E-103 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_3318 908affbd10e2969df05321a492f0b312 582 SUPERFAMILY SSF53720 62 552 1.01E-105 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_3318 908affbd10e2969df05321a492f0b312 582 Pfam PF00171 Aldehyde dehydrogenase family 105 546 2.7E-94 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_3318 908affbd10e2969df05321a492f0b312 582 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 354 365 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PA257_4298 573289e873c0e40ebe88818f0a197911 208 SUPERFAMILY SSF109604 23 194 3.98E-19 T 12-10-2018 PA257_4298 573289e873c0e40ebe88818f0a197911 208 PIRSF PIRSF035170 1 207 1.7E-82 T 12-10-2018 IPR009218 Predicted HD phosphohydrolase PA257_3215 a686b75682409273e543ad3f276b59b8 1076 Gene3D G3DSA:1.10.3210.30 90 319 1.5E-11 T 12-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily PA257_3215 a686b75682409273e543ad3f276b59b8 1076 SUPERFAMILY SSF52540 416 858 5.33E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3215 a686b75682409273e543ad3f276b59b8 1076 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1072 0.0 T 12-10-2018 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type PA257_2194 725a4e44737cb118285958432b70f27c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.1E-34 T 12-10-2018 IPR003004 GspF/PilC family PA257_2194 725a4e44737cb118285958432b70f27c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.1E-34 T 12-10-2018 IPR003004 GspF/PilC family PA257_2194 725a4e44737cb118285958432b70f27c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.1E-34 T 12-10-2018 IPR003004 GspF/PilC family PA257_2194 725a4e44737cb118285958432b70f27c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.1E-34 T 12-10-2018 IPR003004 GspF/PilC family PA257_2194 725a4e44737cb118285958432b70f27c 405 Gene3D G3DSA:1.20.81.30 257 367 1.2E-28 T 12-10-2018 PA257_2194 725a4e44737cb118285958432b70f27c 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 PA257_2194 725a4e44737cb118285958432b70f27c 405 Gene3D G3DSA:1.20.81.30 56 173 3.5E-28 T 12-10-2018 PA257_2194 725a4e44737cb118285958432b70f27c 405 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 1.4E-28 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_2194 725a4e44737cb118285958432b70f27c 405 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 8.1E-28 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_2194 725a4e44737cb118285958432b70f27c 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 1.2E-153 T 12-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 PA257_6431 70394b6f889b7968cce56619dac237e9 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 250 3.3E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6431 70394b6f889b7968cce56619dac237e9 251 SUPERFAMILY SSF53850 30 250 5.25E-36 T 12-10-2018 PA257_6431 70394b6f889b7968cce56619dac237e9 251 SMART SM00062 29 251 0.0032 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_6431 70394b6f889b7968cce56619dac237e9 251 Gene3D G3DSA:3.40.190.10 120 211 2.2E-25 T 12-10-2018 PA257_6431 70394b6f889b7968cce56619dac237e9 251 Gene3D G3DSA:3.40.190.10 35 248 2.2E-25 T 12-10-2018 PA257_3662 85b5cd9b1b2a8aaecff8f752472de542 880 Pfam PF00593 TonB dependent receptor 366 879 8.8E-55 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_3662 85b5cd9b1b2a8aaecff8f752472de542 880 Gene3D G3DSA:2.170.130.10 40 175 1.6E-36 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_3662 85b5cd9b1b2a8aaecff8f752472de542 880 SUPERFAMILY SSF56935 43 880 8.85E-108 T 12-10-2018 PA257_3662 85b5cd9b1b2a8aaecff8f752472de542 880 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 170 1.9E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_5304 b78293e1618bc151ba96293ed8f55f2a 159 Pfam PF10722 Putative bacterial sensory transduction regulator 11 135 2.9E-17 T 12-10-2018 IPR019660 Putative sensory transduction regulator YbjN PA257_6583 1a870bfa16a95824bf88b9c5e0d08a41 374 Pfam PF12698 ABC-2 family transporter protein 28 363 2.1E-29 T 12-10-2018 PA257_5045 d4ad59f370916d1e85a88633c29e9e10 54 Pfam PF01844 HNH endonuclease 2 44 9.5E-10 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PA257_0767 76069c5e384a9d63c4bfaa5481d9067f 185 Pfam PF04717 Type VI secretion system, phage-baseplate injector 6 116 2.2E-44 T 12-10-2018 IPR006531 Gp5 N-terminal PA257_0767 76069c5e384a9d63c4bfaa5481d9067f 185 Gene3D G3DSA:2.40.50.230 4 87 1.0E-25 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily PA257_0767 76069c5e384a9d63c4bfaa5481d9067f 185 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 185 3.5E-57 T 12-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 PA257_1401 9a682aef3e301f9476152cddaa253426 489 PIRSF PIRSF000130 1 489 1.9E-203 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 PA257_1401 9a682aef3e301f9476152cddaa253426 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 83.898 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 PA257_1401 9a682aef3e301f9476152cddaa253426 489 SMART SM01240 7 475 0.0 T 12-10-2018 PA257_1401 9a682aef3e301f9476152cddaa253426 489 SUPERFAMILY SSF51412 2 479 3.53E-127 T 12-10-2018 PA257_1401 9a682aef3e301f9476152cddaa253426 489 Pfam PF00571 CBS domain 95 139 3.4E-10 T 12-10-2018 IPR000644 CBS domain PA257_1401 9a682aef3e301f9476152cddaa253426 489 Pfam PF00571 CBS domain 148 200 1.3E-5 T 12-10-2018 IPR000644 CBS domain PA257_1401 9a682aef3e301f9476152cddaa253426 489 SMART SM00116 157 205 6.7E-4 T 12-10-2018 IPR000644 CBS domain PA257_1401 9a682aef3e301f9476152cddaa253426 489 SMART SM00116 96 143 7.1E-11 T 12-10-2018 IPR000644 CBS domain PA257_1401 9a682aef3e301f9476152cddaa253426 489 SUPERFAMILY SSF54631 94 202 7.07E-26 T 12-10-2018 PA257_1401 9a682aef3e301f9476152cddaa253426 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 1.1E-164 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 PA257_1401 9a682aef3e301f9476152cddaa253426 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 9.5E-191 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 PA257_1401 9a682aef3e301f9476152cddaa253426 489 Gene3D G3DSA:3.20.20.70 1 488 1.7E-211 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_1401 9a682aef3e301f9476152cddaa253426 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 PA257_1025 349365adafa0c5898da86a342bf856d2 207 Pfam PF11363 Protein of unknown function (DUF3164) 12 205 1.4E-81 T 12-10-2018 IPR021505 Bacteriophage B3, Orf6 PA257_6010 349365adafa0c5898da86a342bf856d2 207 Pfam PF11363 Protein of unknown function (DUF3164) 12 205 1.4E-81 T 12-10-2018 IPR021505 Bacteriophage B3, Orf6 PA257_2426 9fc214fada44864f4863611dd6639a2f 254 Pfam PF02517 CAAX protease self-immunity 150 239 9.2E-14 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 PA257_3327 fa4ab85f64706fad0d5b37433de99df7 391 Gene3D G3DSA:3.40.710.10 8 387 1.2E-108 T 12-10-2018 PA257_3327 fa4ab85f64706fad0d5b37433de99df7 391 SUPERFAMILY SSF56601 12 385 1.11E-89 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_3327 fa4ab85f64706fad0d5b37433de99df7 391 Pfam PF00144 Beta-lactamase 16 376 8.9E-72 T 12-10-2018 IPR001466 Beta-lactamase-related PA257_5423 5a26a56179be21107ea821788695ead6 75 Gene3D G3DSA:2.30.30.90 8 75 7.3E-30 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain PA257_5423 5a26a56179be21107ea821788695ead6 75 SMART SM00899 1 73 5.1E-12 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PA257_5423 5a26a56179be21107ea821788695ead6 75 Pfam PF04023 FeoA domain 2 65 2.7E-11 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PA257_5423 5a26a56179be21107ea821788695ead6 75 SUPERFAMILY SSF50037 3 71 2.98E-17 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal PA257_4720 6f5666942ffb9cf1e19ff13d7252d8d4 132 Pfam PF02561 Flagellar protein FliS 6 119 2.6E-28 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 PA257_4720 6f5666942ffb9cf1e19ff13d7252d8d4 132 SUPERFAMILY SSF101116 13 121 2.35E-28 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 PA257_4720 6f5666942ffb9cf1e19ff13d7252d8d4 132 Gene3D G3DSA:1.20.120.340 1 124 5.8E-31 T 12-10-2018 PA257_4720 6f5666942ffb9cf1e19ff13d7252d8d4 132 PIRSF PIRSF039090 1 130 1.5E-35 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 PA257_4720 6f5666942ffb9cf1e19ff13d7252d8d4 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 119 7.2E-17 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 PA257_3851 9436461e40ce5a991af281035c88775f 255 Pfam PF04116 Fatty acid hydroxylase superfamily 76 206 1.6E-28 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 PA257_5333 5ff25edf1f3521412fff7c3a846b5b39 471 SUPERFAMILY SSF56672 2 228 4.11E-33 T 12-10-2018 PA257_5333 5ff25edf1f3521412fff7c3a846b5b39 471 Pfam PF00817 impB/mucB/samB family 24 150 4.4E-6 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PA257_6694 cfa800cda8deb502d3d41a60c3c639aa 387 SUPERFAMILY SSF103473 3 369 1.7E-37 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_6694 cfa800cda8deb502d3d41a60c3c639aa 387 Pfam PF07690 Major Facilitator Superfamily 11 238 2.0E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_6694 cfa800cda8deb502d3d41a60c3c639aa 387 Gene3D G3DSA:1.20.1250.20 2 177 7.1E-16 T 12-10-2018 PA257_6694 cfa800cda8deb502d3d41a60c3c639aa 387 Gene3D G3DSA:1.20.1250.20 196 384 1.6E-13 T 12-10-2018 PA257_3283 c29cb87a7f891fdfc454cdf3d14ae2ed 366 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 11 363 2.0E-125 T 12-10-2018 IPR017740 Type VI secretion system-associated, ImpA PA257_3283 c29cb87a7f891fdfc454cdf3d14ae2ed 366 Pfam PF06812 ImpA, N-terminal, type VI secretion system 16 138 1.8E-37 T 12-10-2018 IPR010657 ImpA, N-terminal PA257_4993 e08d9e019c9cea14e08abab0950cb854 167 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 86 143 4.0E-21 T 12-10-2018 IPR018637 Domain of unknown function DUF2059 PA257_6166 2104b35e338d9077814986d386882737 362 Pfam PF00487 Fatty acid desaturase 64 332 1.0E-30 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PA257_2264 c8e852847557abada7b2f0faedf68e7d 310 Gene3D G3DSA:2.30.110.10 160 268 1.3E-9 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PA257_2264 c8e852847557abada7b2f0faedf68e7d 310 SUPERFAMILY SSF50475 168 264 1.09E-6 T 12-10-2018 PA257_2264 c8e852847557abada7b2f0faedf68e7d 310 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 167 262 2.7E-12 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_2264 c8e852847557abada7b2f0faedf68e7d 310 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 37 123 3.4E-10 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PA257_6771 5dec5f8cbdc633cc57dbed4e4e8337f0 392 SUPERFAMILY SSF52540 34 274 8.69E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6771 5dec5f8cbdc633cc57dbed4e4e8337f0 392 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 389 5.7E-180 T 12-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 PA257_6771 5dec5f8cbdc633cc57dbed4e4e8337f0 392 Pfam PF00005 ABC transporter 46 195 9.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6771 5dec5f8cbdc633cc57dbed4e4e8337f0 392 SMART SM00382 52 253 3.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6771 5dec5f8cbdc633cc57dbed4e4e8337f0 392 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PA257_6771 5dec5f8cbdc633cc57dbed4e4e8337f0 392 Gene3D G3DSA:3.40.50.300 30 292 1.4E-69 T 12-10-2018 PA257_3597 efc2e8d09c95df4f92238469e421112c 174 Pfam PF13628 Domain of unknown function (DUF4142) 34 167 1.2E-40 T 12-10-2018 IPR025419 Domain of unknown function DUF4142 PA257_2371 fe303f7e33e3446a6600b25dca6aa7b8 509 Pfam PF00860 Permease family 25 404 3.6E-90 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PA257_2371 fe303f7e33e3446a6600b25dca6aa7b8 509 TIGRFAM TIGR03173 pbuX: xanthine permease 27 437 1.5E-152 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 PA257_2371 fe303f7e33e3446a6600b25dca6aa7b8 509 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 352 372 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PA257_2371 fe303f7e33e3446a6600b25dca6aa7b8 509 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 24 434 1.6E-100 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PA257_1862 9b2e82534227e4b1fb69443ba4f953b3 171 Gene3D G3DSA:1.10.1740.10 4 82 2.2E-13 T 12-10-2018 PA257_1862 9b2e82534227e4b1fb69443ba4f953b3 171 Pfam PF08281 Sigma-70, region 4 112 162 2.0E-18 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_1862 9b2e82534227e4b1fb69443ba4f953b3 171 Pfam PF04542 Sigma-70 region 2 13 80 2.8E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PA257_1862 9b2e82534227e4b1fb69443ba4f953b3 171 Gene3D G3DSA:1.10.10.10 95 170 3.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1862 9b2e82534227e4b1fb69443ba4f953b3 171 SUPERFAMILY SSF88946 8 85 4.71E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_1862 9b2e82534227e4b1fb69443ba4f953b3 171 SUPERFAMILY SSF88659 96 169 4.58E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_1862 9b2e82534227e4b1fb69443ba4f953b3 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 166 9.2E-27 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_3496 6617a28100424efac3459abb5fdd16d1 443 PIRSF PIRSF006060 1 434 2.5E-62 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_3496 6617a28100424efac3459abb5fdd16d1 443 Gene3D G3DSA:1.20.1740.10 9 437 1.2E-63 T 12-10-2018 PA257_3496 6617a28100424efac3459abb5fdd16d1 443 Pfam PF00324 Amino acid permease 31 373 2.3E-41 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_6202 751306040b19d0181cb427310ed7bcca 195 Gene3D G3DSA:3.40.50.450 1 194 6.6E-79 T 12-10-2018 PA257_6202 751306040b19d0181cb427310ed7bcca 195 Pfam PF03641 Possible lysine decarboxylase 48 177 5.8E-42 T 12-10-2018 IPR031100 LOG family PA257_6202 751306040b19d0181cb427310ed7bcca 195 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 179 1.3E-63 T 12-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PA257_6202 751306040b19d0181cb427310ed7bcca 195 SUPERFAMILY SSF102405 2 180 3.51E-64 T 12-10-2018 PA257_4353 06eaa8e12853c0913c1ecfbd58f78c69 195 Pfam PF03695 Uncharacterised protein family (UPF0149) 9 181 2.3E-32 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 PA257_4353 06eaa8e12853c0913c1ecfbd58f78c69 195 Gene3D G3DSA:1.20.120.740 5 141 9.9E-6 T 12-10-2018 PA257_4353 06eaa8e12853c0913c1ecfbd58f78c69 195 SUPERFAMILY SSF101327 9 181 2.48E-19 T 12-10-2018 IPR036255 YgfB-like superfamily PA257_4353 06eaa8e12853c0913c1ecfbd58f78c69 195 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 7 179 8.6E-44 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 PA257_0148 b19694ac2978716d8727e919f36f309c 75 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 4.2E-12 T 12-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PA257_0148 b19694ac2978716d8727e919f36f309c 75 SUPERFAMILY SSF48092 16 72 4.32E-12 T 12-10-2018 IPR036535 STAT transcription factor, N-terminal domain superfamily Reactome: R-HSA-8854691 PA257_0773 8b03fd0da0c12192e295103a3d904e12 386 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 106 272 3.5E-32 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain PA257_0773 8b03fd0da0c12192e295103a3d904e12 386 Pfam PF17482 Phage tail sheath C-terminal domain 273 375 2.7E-20 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain PA257_1431 e6af656086781782a291e2c22f03d8d0 330 Gene3D G3DSA:1.20.1250.20 1 320 6.1E-23 T 12-10-2018 PA257_1431 e6af656086781782a291e2c22f03d8d0 330 Pfam PF07690 Major Facilitator Superfamily 6 278 1.9E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1431 e6af656086781782a291e2c22f03d8d0 330 SUPERFAMILY SSF103473 5 317 2.75E-33 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1073 0024fe1adc0aa93b24b9b04d5d1e34e8 278 Gene3D G3DSA:3.40.50.150 48 203 1.8E-11 T 12-10-2018 PA257_1073 0024fe1adc0aa93b24b9b04d5d1e34e8 278 SUPERFAMILY SSF53335 53 192 3.02E-13 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_2080 34fcf131b7a7fbb12715bbf792b3b28c 105 Pfam PF06127 Protein of unknown function (DUF962) 9 102 1.5E-38 T 12-10-2018 IPR009305 Protein of unknown function DUF962 PA257_5927 61c46cb4c3dbe890092c91ae7c2ea6a9 149 Pfam PF04214 Protein of unknown function, DUF 53 120 1.5E-27 T 12-10-2018 IPR007332 Protein of unknown function DUF411 PA257_0387 0bde01aeb5768b28c2bf31778acfcab3 310 SUPERFAMILY SSF50956 20 299 4.71E-41 T 12-10-2018 PA257_0387 0bde01aeb5768b28c2bf31778acfcab3 310 Gene3D G3DSA:2.120.10.30 70 303 6.8E-11 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PA257_0387 0bde01aeb5768b28c2bf31778acfcab3 310 Pfam PF06977 SdiA-regulated 51 297 8.0E-92 T 12-10-2018 IPR009722 SdiA-regulated PA257_1082 bf4f0bdd2a948d0d9f3a89e450486358 118 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 115 1.2E-21 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB PA257_3181 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 SUPERFAMILY SSF51338 22 577 1.07E-24 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_3181 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 Gene3D G3DSA:3.10.310.70 101 227 3.0E-115 T 12-10-2018 PA257_3181 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 SUPERFAMILY SSF51556 82 536 1.36E-30 T 12-10-2018 IPR032466 Metal-dependent hydrolase PA257_3181 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 Pfam PF07969 Amidohydrolase family 71 576 6.1E-75 T 12-10-2018 IPR013108 Amidohydrolase 3 PA257_3181 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 Gene3D G3DSA:2.30.40.10 29 552 3.0E-115 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PA257_3181 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 Gene3D G3DSA:3.20.20.140 83 535 3.0E-115 T 12-10-2018 PA257_5131 593ac63caf3136dfce44e3e2f6c2f67b 134 SUPERFAMILY SSF141066 32 133 1.31E-27 T 12-10-2018 IPR036331 Chagasin-like superfamily PA257_5131 593ac63caf3136dfce44e3e2f6c2f67b 134 Gene3D G3DSA:2.60.40.2020 38 134 1.3E-29 T 12-10-2018 IPR036331 Chagasin-like superfamily PA257_5131 593ac63caf3136dfce44e3e2f6c2f67b 134 Pfam PF09394 Chagasin family peptidase inhibitor I42 41 130 6.2E-22 T 12-10-2018 IPR018990 Proteinase inhibitor I42, chagasin PA257_3939 6a63105b7bdc5c73ce481eff111d760a 500 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 500 320.704 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 PA257_3939 6a63105b7bdc5c73ce481eff111d760a 500 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 5 497 1.6E-227 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 PA257_6041 c3a08efebfeea6acadf1a2536261cb13 169 Pfam PF07030 Protein of unknown function (DUF1320) 2 154 2.2E-26 T 12-10-2018 IPR009752 Bacteriophage Mu, Gp36 PA257_5787 32d330268378b897713161652821c056 688 Pfam PF02554 Carbon starvation protein CstA 35 411 9.5E-169 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 PA257_5787 32d330268378b897713161652821c056 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 466 594 1.3E-35 T 12-10-2018 IPR025299 CstA, C-terminal domain PA257_1687 80c40b3cd22e166ad2213692454616dd 416 Pfam PF03573 outer membrane porin, OprD family 25 414 1.9E-146 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_1687 80c40b3cd22e166ad2213692454616dd 416 Gene3D G3DSA:2.40.160.10 30 416 1.1E-166 T 12-10-2018 IPR023614 Porin domain superfamily PA257_1579 69ba1fd660bfb80dc370490483d7df47 201 Hamap MF_00052_B Ribonuclease HII [rnhB]. 13 192 39.545 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 PA257_1579 69ba1fd660bfb80dc370490483d7df47 201 Gene3D G3DSA:3.30.420.10 6 200 1.4E-77 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_1579 69ba1fd660bfb80dc370490483d7df47 201 Pfam PF01351 Ribonuclease HII 15 191 1.8E-42 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain PA257_1579 69ba1fd660bfb80dc370490483d7df47 201 SUPERFAMILY SSF53098 13 197 2.73E-71 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_1679 686f08b51b92080abbcccfce68ec14de 469 Pfam PF00083 Sugar (and other) transporter 21 218 1.2E-17 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PA257_1679 686f08b51b92080abbcccfce68ec14de 469 SUPERFAMILY SSF103473 6 426 4.32E-53 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1679 686f08b51b92080abbcccfce68ec14de 469 Gene3D G3DSA:1.20.1250.20 18 444 4.7E-49 T 12-10-2018 PA257_6751 77ef3dabcf9509a9d627e8c33e4c0748 299 Pfam PF13511 Domain of unknown function (DUF4124) 11 44 2.1E-10 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 PA257_6751 77ef3dabcf9509a9d627e8c33e4c0748 299 Pfam PF01551 Peptidase family M23 177 271 2.6E-24 T 12-10-2018 IPR016047 Peptidase M23 PA257_6751 77ef3dabcf9509a9d627e8c33e4c0748 299 SUPERFAMILY SSF51261 159 271 5.75E-30 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_6751 77ef3dabcf9509a9d627e8c33e4c0748 299 Gene3D G3DSA:2.70.70.10 152 285 1.6E-35 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_3528 a7d05833a4236578fe5d7287808f45bd 294 SUPERFAMILY SSF140486 6 129 4.84E-61 T 12-10-2018 IPR028997 PA2201-like, N-terminal PA257_3528 a7d05833a4236578fe5d7287808f45bd 294 Pfam PF08929 Domain of unknown function (DUF1911) 177 284 3.2E-23 T 12-10-2018 IPR015025 Domain of unknown function DUF1911 PA257_3528 a7d05833a4236578fe5d7287808f45bd 294 SUPERFAMILY SSF140731 137 291 4.71E-44 T 12-10-2018 IPR028983 PA2201-like, C-terminal PA257_3528 a7d05833a4236578fe5d7287808f45bd 294 Gene3D G3DSA:1.10.3920.10 135 294 1.2E-59 T 12-10-2018 IPR028983 PA2201-like, C-terminal PA257_3528 a7d05833a4236578fe5d7287808f45bd 294 Gene3D G3DSA:1.20.1440.70 1 130 8.2E-73 T 12-10-2018 IPR028997 PA2201-like, N-terminal PA257_5686 216a85f91e541935757e45b1a0793450 743 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 683 0.0 T 12-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 PA257_5686 216a85f91e541935757e45b1a0793450 743 SUPERFAMILY SSF52540 152 688 2.3E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5686 216a85f91e541935757e45b1a0793450 743 Pfam PF12696 TraM recognition site of TraD and TraG 536 662 4.2E-11 T 12-10-2018 IPR032689 TraD/TraG, TraM recognition site PA257_5686 216a85f91e541935757e45b1a0793450 743 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 8 683 9.2E-252 T 12-10-2018 IPR022458 Conjugative coupling factor TraG/TraD PA257_5686 216a85f91e541935757e45b1a0793450 743 Gene3D G3DSA:3.40.50.300 451 688 8.5E-25 T 12-10-2018 PA257_2248 990692e884e9d8754661023ea6a61bae 73 Pfam PF11197 Protein of unknown function (DUF2835) 5 71 6.2E-26 T 12-10-2018 IPR021363 Protein of unknown function DUF2835 PA257_1462 54029caa2f936d9ceb35701a7e186b61 166 SUPERFAMILY SSF141523 30 165 4.19E-24 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PA257_1462 54029caa2f936d9ceb35701a7e186b61 166 Pfam PF03734 L,D-transpeptidase catalytic domain 31 164 1.3E-18 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PA257_1462 54029caa2f936d9ceb35701a7e186b61 166 Gene3D G3DSA:2.40.440.10 10 166 3.5E-18 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PA257_2381 7b3486e8d4d01f14ce3845835856dddd 502 SUPERFAMILY SSF50998 67 481 8.89E-5 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PA257_5761 1a4b8bd701fa36f4c5935eb2c0e31226 381 SMART SM00244 148 307 6.4E-15 T 12-10-2018 IPR001107 Band 7 domain PA257_5761 1a4b8bd701fa36f4c5935eb2c0e31226 381 Pfam PF01145 SPFH domain / Band 7 family 152 323 3.8E-22 T 12-10-2018 IPR001107 Band 7 domain PA257_5761 1a4b8bd701fa36f4c5935eb2c0e31226 381 Gene3D G3DSA:3.30.479.30 185 309 1.5E-23 T 12-10-2018 PA257_5761 1a4b8bd701fa36f4c5935eb2c0e31226 381 SUPERFAMILY SSF117892 187 313 9.02E-26 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily PA257_5761 1a4b8bd701fa36f4c5935eb2c0e31226 381 PRINTS PR00721 Stomatin signature 239 256 4.7E-16 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_5761 1a4b8bd701fa36f4c5935eb2c0e31226 381 PRINTS PR00721 Stomatin signature 283 301 4.7E-16 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_5761 1a4b8bd701fa36f4c5935eb2c0e31226 381 PRINTS PR00721 Stomatin signature 302 323 4.7E-16 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_5761 1a4b8bd701fa36f4c5935eb2c0e31226 381 PRINTS PR00721 Stomatin signature 204 225 4.7E-16 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_5761 1a4b8bd701fa36f4c5935eb2c0e31226 381 PRINTS PR00721 Stomatin signature 327 350 4.7E-16 T 12-10-2018 IPR001972 Stomatin family GO:0016020 PA257_2856 0ae68533ed27187145ec4822bc7b2e1b 108 SUPERFAMILY SSF52833 19 106 7.72E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2856 0ae68533ed27187145ec4822bc7b2e1b 108 Gene3D G3DSA:3.40.30.10 1 108 2.6E-25 T 12-10-2018 PA257_2856 0ae68533ed27187145ec4822bc7b2e1b 108 Pfam PF00085 Thioredoxin 19 99 3.1E-14 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 PA257_5291 f2dad3bd3a4a78ab95c72c635ab743b4 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 7.2E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_5291 f2dad3bd3a4a78ab95c72c635ab743b4 284 Gene3D G3DSA:3.40.190.290 89 283 5.3E-31 T 12-10-2018 PA257_5291 f2dad3bd3a4a78ab95c72c635ab743b4 284 Gene3D G3DSA:1.10.10.10 1 88 2.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5291 f2dad3bd3a4a78ab95c72c635ab743b4 284 SUPERFAMILY SSF46785 3 109 5.05E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5291 f2dad3bd3a4a78ab95c72c635ab743b4 284 SUPERFAMILY SSF53850 86 281 3.8E-37 T 12-10-2018 PA257_5291 f2dad3bd3a4a78ab95c72c635ab743b4 284 Pfam PF03466 LysR substrate binding domain 85 281 1.0E-42 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_1412 02ef72d1ec3b5297f31e6d547ea84ece 273 Pfam PF06067 Domain of unknown function (DUF932) 37 262 1.6E-58 T 12-10-2018 IPR026325 Protein of unknown function DUF932 PA257_4227 834b3b3e1387f01de9fdfc8a02b52dc3 210 SUPERFAMILY SSF53474 4 182 6.29E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4227 834b3b3e1387f01de9fdfc8a02b52dc3 210 Gene3D G3DSA:3.40.50.1820 13 193 5.0E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0599 cb787a167dc840e02f0dee4f891d3a84 192 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 13 178 1.8E-43 T 12-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE PA257_4604 192172f69608d0f6b6c8dcf076e3919a 205 SUPERFAMILY SSF52499 4 200 4.06E-53 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_4604 192172f69608d0f6b6c8dcf076e3919a 205 Gene3D G3DSA:3.40.50.850 1 205 5.5E-59 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_4604 192172f69608d0f6b6c8dcf076e3919a 205 Pfam PF00857 Isochorismatase family 14 164 5.1E-22 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_2716 c67aed11965c29b5fad10d5a3cac559d 249 Pfam PF05100 Phage minor tail protein L 25 244 8.8E-71 T 12-10-2018 IPR006487 Bacteriophage lambda, GpL, minor tail PA257_2716 c67aed11965c29b5fad10d5a3cac559d 249 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 6 244 9.2E-60 T 12-10-2018 IPR006487 Bacteriophage lambda, GpL, minor tail PA257_5031 a3dcbda0fa97b0e77bd57a5ded68e0a3 1129 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 142 216 1.1E-24 T 12-10-2018 IPR013491 Caudovirus, tape measure, N-terminal PA257_5031 a3dcbda0fa97b0e77bd57a5ded68e0a3 1129 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 870 956 2.3E-14 T 12-10-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal PA257_2702 522d19be977522d41636627173041bbf 451 Pfam PF13264 Domain of unknown function (DUF4055) 245 375 3.9E-37 T 12-10-2018 IPR025129 Domain of unknown function DUF4055 PA257_4085 99167ec96bce282365b81722877a9013 700 PIRSF PIRSF005091 16 695 3.4E-133 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like PA257_4085 99167ec96bce282365b81722877a9013 700 Gene3D G3DSA:3.40.720.10 313 598 9.4E-53 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PA257_4085 99167ec96bce282365b81722877a9013 700 Pfam PF00884 Sulfatase 315 594 2.1E-45 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PA257_4085 99167ec96bce282365b81722877a9013 700 SUPERFAMILY SSF53649 315 677 8.72E-64 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PA257_4302 f672dc0792ce7e38f25b5779a91a1455 411 Pfam PF04346 Ethanolamine utilisation protein, EutH 5 384 9.2E-116 T 12-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 PA257_4302 f672dc0792ce7e38f25b5779a91a1455 411 PIRSF PIRSF019466 2 407 2.6E-135 T 12-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 PA257_5864 e02219ef4af6303174312a25a427e6b9 427 Pfam PF05707 Zonular occludens toxin (Zot) 2 213 9.6E-68 T 12-10-2018 IPR008900 Zona occludens toxin PA257_5864 e02219ef4af6303174312a25a427e6b9 427 Gene3D G3DSA:3.40.50.300 1 212 5.1E-36 T 12-10-2018 PA257_5637 d7882c5b2d67a19292cfa01128ea56ee 242 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 10 225 2.6E-92 T 12-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 PA257_5637 d7882c5b2d67a19292cfa01128ea56ee 242 Pfam PF08900 Domain of unknown function (DUF1845) 8 222 1.0E-78 T 12-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 PA257_2346 8f8a4d1fd04e7227af180edbfabf906b 118 Pfam PF07238 PilZ domain 17 106 2.4E-13 T 12-10-2018 IPR009875 PilZ domain GO:0035438 PA257_2346 8f8a4d1fd04e7227af180edbfabf906b 118 Gene3D G3DSA:2.40.10.220 6 118 2.3E-48 T 12-10-2018 PA257_4793 a8f1ddf5bd7532ad59a4022dac55ca30 122 SUPERFAMILY SSF47413 15 56 5.9E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_4793 a8f1ddf5bd7532ad59a4022dac55ca30 122 Gene3D G3DSA:1.10.260.40 6 73 9.6E-9 T 12-10-2018 PA257_4793 a8f1ddf5bd7532ad59a4022dac55ca30 122 Pfam PF09722 Protein of unknown function (DUF2384) 71 120 4.5E-14 T 12-10-2018 IPR024467 Domain of unknown function DUF2384 PA257_4793 a8f1ddf5bd7532ad59a4022dac55ca30 122 Pfam PF01381 Helix-turn-helix 21 48 1.1E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_1077 bedb7ac3ef972d2b2965a5223845a877 496 Pfam PF13520 Amino acid permease 16 427 1.6E-31 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_1077 bedb7ac3ef972d2b2965a5223845a877 496 Gene3D G3DSA:1.20.1740.10 12 463 5.1E-45 T 12-10-2018 PA257_1077 bedb7ac3ef972d2b2965a5223845a877 496 PIRSF PIRSF006060 1 487 1.7E-65 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_5669 c368299bed6e13c248d973a365d1f7c8 386 SUPERFAMILY SSF53335 5 83 2.99E-8 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_5669 c368299bed6e13c248d973a365d1f7c8 386 Gene3D G3DSA:3.40.50.150 2 119 4.8E-8 T 12-10-2018 PA257_5669 c368299bed6e13c248d973a365d1f7c8 386 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 10 16 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PA257_6356 59a6c98f48bedf0cc98cc02f2c3cdf26 208 SUPERFAMILY SSF55718 29 122 1.61E-5 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PA257_6356 59a6c98f48bedf0cc98cc02f2c3cdf26 208 Pfam PF02036 SCP-2 sterol transfer family 17 114 8.2E-13 T 12-10-2018 IPR003033 SCP2 sterol-binding domain PA257_1971 b70cdda120a74cc49e73f42a0bd189b0 200 Gene3D G3DSA:2.60.120.590 9 199 1.2E-64 T 12-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily PA257_1971 b70cdda120a74cc49e73f42a0bd189b0 200 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 16 194 3.1E-34 T 12-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PA257_1971 b70cdda120a74cc49e73f42a0bd189b0 200 SUPERFAMILY SSF51197 8 198 7.0E-63 T 12-10-2018 PA257_6445 c4292341cf593f6db5ceb6a074df35bf 360 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 11 124 5.8E-22 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PA257_6445 c4292341cf593f6db5ceb6a074df35bf 360 Gene3D G3DSA:3.40.50.720 12 320 2.8E-121 T 12-10-2018 PA257_6445 c4292341cf593f6db5ceb6a074df35bf 360 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 144 219 6.5E-9 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PA257_6445 c4292341cf593f6db5ceb6a074df35bf 360 Gene3D G3DSA:3.30.360.10 134 342 2.8E-121 T 12-10-2018 PA257_6445 c4292341cf593f6db5ceb6a074df35bf 360 SUPERFAMILY SSF51735 10 203 7.09E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_3776 6c3af658e6503c1f01e3b44f031ff245 123 Gene3D G3DSA:3.30.429.10 1 123 6.6E-41 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily PA257_3776 6c3af658e6503c1f01e3b44f031ff245 123 SUPERFAMILY SSF55331 2 122 6.5E-30 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily PA257_3776 6c3af658e6503c1f01e3b44f031ff245 123 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 117 2.1E-5 T 12-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 PA257_3541 96c51431097f76425604a2919bb27d97 140 Pfam PF04120 Low affinity iron permease 3 125 4.9E-50 T 12-10-2018 IPR007251 Low affinity iron permease, Fet4 GO:0055085 PA257_3379 cce931195ef1ba6dade1395a558b9e02 584 Gene3D G3DSA:3.50.50.60 1 170 5.3E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3379 cce931195ef1ba6dade1395a558b9e02 584 Gene3D G3DSA:3.50.50.60 465 576 1.7E-10 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3379 cce931195ef1ba6dade1395a558b9e02 584 SUPERFAMILY SSF54373 411 487 2.08E-10 T 12-10-2018 PA257_3379 cce931195ef1ba6dade1395a558b9e02 584 Pfam PF05199 GMC oxidoreductase 439 564 1.8E-26 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PA257_3379 cce931195ef1ba6dade1395a558b9e02 584 Gene3D G3DSA:3.50.50.60 240 342 1.3E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3379 cce931195ef1ba6dade1395a558b9e02 584 Pfam PF00732 GMC oxidoreductase 192 337 7.2E-9 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PA257_3379 cce931195ef1ba6dade1395a558b9e02 584 SUPERFAMILY SSF51905 1 575 3.56E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3759 9bfa0c3f58583dc40ea1153166ae6562 215 Gene3D G3DSA:2.160.20.80 114 210 2.1E-21 T 12-10-2018 PA257_3759 9bfa0c3f58583dc40ea1153166ae6562 215 Gene3D G3DSA:2.160.20.80 15 113 5.4E-22 T 12-10-2018 PA257_3759 9bfa0c3f58583dc40ea1153166ae6562 215 SUPERFAMILY SSF141571 36 209 1.88E-39 T 12-10-2018 PA257_3759 9bfa0c3f58583dc40ea1153166ae6562 215 Pfam PF00805 Pentapeptide repeats (8 copies) 167 206 5.6E-10 T 12-10-2018 IPR001646 Pentapeptide repeat PA257_3759 9bfa0c3f58583dc40ea1153166ae6562 215 Pfam PF00805 Pentapeptide repeats (8 copies) 72 107 3.0E-11 T 12-10-2018 IPR001646 Pentapeptide repeat PA257_3759 9bfa0c3f58583dc40ea1153166ae6562 215 Pfam PF00805 Pentapeptide repeats (8 copies) 127 166 2.3E-8 T 12-10-2018 IPR001646 Pentapeptide repeat PA257_3695 40be66e21af4e490c5b82a5c04b53fd5 456 Pfam PF00324 Amino acid permease 22 380 8.0E-39 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_3695 40be66e21af4e490c5b82a5c04b53fd5 456 Gene3D G3DSA:1.20.1740.10 12 446 5.7E-72 T 12-10-2018 PA257_3695 40be66e21af4e490c5b82a5c04b53fd5 456 PIRSF PIRSF006060 1 454 3.2E-78 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_2438 7c2eecc9923d06aa9b4a9765438f6cb3 256 SMART SM00880 11 253 1.9E-41 T 12-10-2018 IPR007899 CHAD domain PA257_2438 7c2eecc9923d06aa9b4a9765438f6cb3 256 Gene3D G3DSA:1.40.20.10 4 252 7.0E-26 T 12-10-2018 IPR038186 CHAD domain superfamily PA257_2438 7c2eecc9923d06aa9b4a9765438f6cb3 256 Pfam PF05235 CHAD domain 23 214 2.5E-27 T 12-10-2018 IPR007899 CHAD domain PA257_4407 57455d45e7cdece0395ce8926c471046 494 Gene3D G3DSA:3.40.50.2000 289 457 1.4E-23 T 12-10-2018 PA257_4407 57455d45e7cdece0395ce8926c471046 494 Pfam PF13692 Glycosyl transferases group 1 305 439 7.2E-14 T 12-10-2018 PA257_4407 57455d45e7cdece0395ce8926c471046 494 SUPERFAMILY SSF53756 123 467 5.23E-38 T 12-10-2018 PA257_0425 fc83a4ca9910cbd9e371c34f70303f53 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 25 448 1.3E-121 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PA257_0425 fc83a4ca9910cbd9e371c34f70303f53 461 Pfam PF00860 Permease family 29 420 2.4E-94 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PA257_0425 fc83a4ca9910cbd9e371c34f70303f53 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 368 388 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PA257_0425 fc83a4ca9910cbd9e371c34f70303f53 461 TIGRFAM TIGR03173 pbuX: xanthine permease 33 452 4.0E-128 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 PA257_4428 2e19ed5c0d2ee197a52ba47d4008734e 174 SUPERFAMILY SSF88659 105 168 3.49E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PA257_4428 2e19ed5c0d2ee197a52ba47d4008734e 174 Pfam PF08281 Sigma-70, region 4 111 163 1.9E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PA257_4428 2e19ed5c0d2ee197a52ba47d4008734e 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 167 2.2E-20 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PA257_4428 2e19ed5c0d2ee197a52ba47d4008734e 174 SUPERFAMILY SSF88946 14 92 1.57E-6 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PA257_4428 2e19ed5c0d2ee197a52ba47d4008734e 174 Gene3D G3DSA:1.10.10.10 96 170 9.8E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_1187 afef880c6c6908ecdd5be6871086af77 130 Gene3D G3DSA:1.10.490.10 1 130 1.2E-37 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PA257_1187 afef880c6c6908ecdd5be6871086af77 130 SUPERFAMILY SSF46458 5 130 7.57E-34 T 12-10-2018 IPR009050 Globin-like superfamily PA257_6430 719eeb3e4b736c69e5f258d07196eb94 486 SUPERFAMILY SSF50939 142 482 1.63E-9 T 12-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 PA257_0312 d6609aea9c95a5213a2253593ee3e7fe 73 Pfam PF02411 MerT mercuric transport protein 1 73 1.7E-36 T 12-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 PA257_1619 316a64e10edc06b67e96414dce1d006c 732 Pfam PF13662 Toprim domain 203 278 1.2E-5 T 12-10-2018 IPR006171 TOPRIM domain PA257_1619 316a64e10edc06b67e96414dce1d006c 732 Pfam PF05272 Virulence-associated protein E 429 619 2.7E-65 T 12-10-2018 IPR007936 Virulence-associated E PA257_2773 6254d8eb5766cc47d494be25ee825e84 114 SUPERFAMILY SSF51182 16 113 1.69E-20 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_2773 6254d8eb5766cc47d494be25ee825e84 114 Gene3D G3DSA:2.60.120.10 5 114 5.3E-28 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_2773 6254d8eb5766cc47d494be25ee825e84 114 Pfam PF05899 Protein of unknown function (DUF861) 39 111 6.2E-28 T 12-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PA257_0220 214236511d417d22e5fd4585d4671fd2 300 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 16 280 7.1E-53 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 PA257_0220 214236511d417d22e5fd4585d4671fd2 300 Gene3D G3DSA:3.60.130.10 3 300 1.3E-94 T 12-10-2018 PA257_0220 214236511d417d22e5fd4585d4671fd2 300 SUPERFAMILY SSF51197 13 296 4.53E-89 T 12-10-2018 PA257_3826 19a865fbb5d11ca3dfc1910d5c5d1639 212 Gene3D G3DSA:3.50.50.60 21 207 2.7E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3826 19a865fbb5d11ca3dfc1910d5c5d1639 212 Gene3D G3DSA:3.30.9.10 115 171 2.7E-37 T 12-10-2018 PA257_3826 19a865fbb5d11ca3dfc1910d5c5d1639 212 SUPERFAMILY SSF51905 20 207 1.2E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_3826 19a865fbb5d11ca3dfc1910d5c5d1639 212 Pfam PF01266 FAD dependent oxidoreductase 21 204 4.6E-34 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_5472 e257e692b35143fa508462b203234c2d 153 Pfam PF05258 Protein of unknown function (DUF721) 15 96 1.5E-9 T 12-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 PA257_5287 9c323fde22a696c8ed99709c075a9746 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 28.922 T 12-10-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair PA257_5287 9c323fde22a696c8ed99709c075a9746 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 2.2E-39 T 12-10-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair PA257_1067 62ee541668b94a2381c746376aa844f3 381 Gene3D G3DSA:2.60.40.1090 241 380 6.7E-19 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 PA257_1067 62ee541668b94a2381c746376aa844f3 381 SUPERFAMILY SSF49401 242 380 1.84E-17 T 12-10-2018 IPR008966 Adhesion domain superfamily PA257_1067 62ee541668b94a2381c746376aa844f3 381 Pfam PF00419 Fimbrial protein 242 380 4.2E-6 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PA257_6603 62baf695bdfc83589bcac5dee3e38736 209 PIRSF PIRSF006324 1 206 1.9E-51 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_6603 62baf695bdfc83589bcac5dee3e38736 209 Pfam PF01810 LysE type translocator 16 203 7.9E-33 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_0714 b7d38647baed3c6d4455712434610615 204 Pfam PF14300 Domain of unknown function (DUF4375) 73 194 2.3E-25 T 12-10-2018 IPR025402 Domain of unknown function DUF4375 PA257_4489 adef9a9c3627007ed7631b3185878442 174 Pfam PF11157 Protein of unknown function (DUF2937) 2 159 1.7E-62 T 12-10-2018 IPR022584 Protein of unknown function DUF2937 PA257_4489 adef9a9c3627007ed7631b3185878442 174 PIRSF PIRSF029393 1 172 3.3E-82 T 12-10-2018 IPR016917 Uncharacterised conserved protein UCP029393 PA257_1940 7f88842f073269674b31b6d5f87062dd 388 Pfam PF07690 Major Facilitator Superfamily 10 310 8.1E-36 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1940 7f88842f073269674b31b6d5f87062dd 388 Gene3D G3DSA:1.20.1250.20 199 376 1.7E-15 T 12-10-2018 PA257_1940 7f88842f073269674b31b6d5f87062dd 388 SUPERFAMILY SSF103473 3 373 4.84E-50 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1940 7f88842f073269674b31b6d5f87062dd 388 Gene3D G3DSA:1.20.1250.20 2 198 1.6E-22 T 12-10-2018 PA257_2612 09fd87a3aafe4542865c94802b82b0a2 241 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 45 238 5.8E-85 T 12-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 PA257_3732 3009c3e802e9ee80a2bb860b855466c2 212 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 209 2.1E-88 T 12-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 PA257_3732 3009c3e802e9ee80a2bb860b855466c2 212 SUPERFAMILY SSF52833 1 92 6.73E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_3732 3009c3e802e9ee80a2bb860b855466c2 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 82 1.6E-17 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_3732 3009c3e802e9ee80a2bb860b855466c2 212 SUPERFAMILY SSF47616 84 210 9.33E-29 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_3732 3009c3e802e9ee80a2bb860b855466c2 212 Gene3D G3DSA:3.40.30.10 1 90 9.9E-28 T 12-10-2018 PA257_3732 3009c3e802e9ee80a2bb860b855466c2 212 Pfam PF13410 Glutathione S-transferase, C-terminal domain 138 196 4.1E-7 T 12-10-2018 PA257_3732 3009c3e802e9ee80a2bb860b855466c2 212 Gene3D G3DSA:1.20.1050.10 91 212 6.4E-43 T 12-10-2018 PA257_3608 55a5eb3aafa0b2d9ec3baa632f874730 482 SUPERFAMILY SSF53720 4 477 1.26E-137 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PA257_3608 55a5eb3aafa0b2d9ec3baa632f874730 482 Pfam PF00171 Aldehyde dehydrogenase family 13 475 1.9E-139 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PA257_3608 55a5eb3aafa0b2d9ec3baa632f874730 482 Gene3D G3DSA:3.40.605.10 18 469 9.5E-143 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PA257_3608 55a5eb3aafa0b2d9ec3baa632f874730 482 Gene3D G3DSA:3.40.309.10 252 445 9.5E-143 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PA257_2671 fd0f85fef7ee16187a5c7563a74081d3 247 SUPERFAMILY SSF56784 11 236 3.36E-28 T 12-10-2018 IPR036412 HAD-like superfamily PA257_4404 803175eac5eaceba091014f1934a4f4d 407 Gene3D G3DSA:3.40.50.300 1 250 5.4E-8 T 12-10-2018 PA257_4404 803175eac5eaceba091014f1934a4f4d 407 SUPERFAMILY SSF52540 3 209 2.24E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_4404 803175eac5eaceba091014f1934a4f4d 407 PIRSF PIRSF029407 1 404 6.3E-190 T 12-10-2018 IPR014556 Uncharacterised conserved protein UCP029407 PA257_2661 3da66da9afd078b74ab996f33d91ce2f 206 SUPERFAMILY SSF52833 1 85 9.49E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2661 3da66da9afd078b74ab996f33d91ce2f 206 SUPERFAMILY SSF47616 80 201 1.81E-31 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_2661 3da66da9afd078b74ab996f33d91ce2f 206 Gene3D G3DSA:3.40.30.10 1 83 4.8E-33 T 12-10-2018 PA257_2661 3da66da9afd078b74ab996f33d91ce2f 206 Gene3D G3DSA:1.20.1050.10 84 200 8.0E-44 T 12-10-2018 PA257_2661 3da66da9afd078b74ab996f33d91ce2f 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.9E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_2661 3da66da9afd078b74ab996f33d91ce2f 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 119 195 1.9E-7 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal PA257_3487 4215d1b8f6a4e3bd5c4fb6fcd842fd1b 528 Pfam PF06980 Protein of unknown function (DUF1302) 5 527 1.7E-141 T 12-10-2018 IPR010727 Protein of unknown function DUF1302 PA257_0582 247239d471cfc1fd34a6ef8d48537d51 496 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 38 455 7.2E-92 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 PA257_0582 247239d471cfc1fd34a6ef8d48537d51 496 Gene3D G3DSA:1.10.4160.10 23 478 3.7E-115 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily PA257_3258 1d059b608c7cb02db9c30e3c500e3543 383 PIRSF PIRSF000138 1 380 3.2E-128 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 PA257_3258 1d059b608c7cb02db9c30e3c500e3543 383 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 274 280 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 PA257_3258 1d059b608c7cb02db9c30e3c500e3543 383 SUPERFAMILY SSF51395 4 376 1.22E-104 T 12-10-2018 PA257_3258 1d059b608c7cb02db9c30e3c500e3543 383 Gene3D G3DSA:3.20.20.70 3 379 1.4E-134 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_3258 1d059b608c7cb02db9c30e3c500e3543 383 Pfam PF01070 FMN-dependent dehydrogenase 14 376 5.3E-136 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 PA257_1216 1f51be8b5f25b377479cee1b71978da1 93 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.6E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_1216 1f51be8b5f25b377479cee1b71978da1 93 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.6E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_1216 1f51be8b5f25b377479cee1b71978da1 93 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.6E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_1216 1f51be8b5f25b377479cee1b71978da1 93 SMART SM00411 3 92 1.2E-28 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_1216 1f51be8b5f25b377479cee1b71978da1 93 SUPERFAMILY SSF47729 3 92 7.65E-28 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_1216 1f51be8b5f25b377479cee1b71978da1 93 Gene3D G3DSA:4.10.520.10 1 93 2.8E-31 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PA257_1216 1f51be8b5f25b377479cee1b71978da1 93 Pfam PF00216 Bacterial DNA-binding protein 3 92 3.1E-28 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PA257_1715 8dfbf68bff020940547f580fb1ebb354 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 79 4.3E-23 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PA257_1715 8dfbf68bff020940547f580fb1ebb354 97 SUPERFAMILY SSF54909 1 95 1.61E-29 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_1715 8dfbf68bff020940547f580fb1ebb354 97 Gene3D G3DSA:3.30.70.100 1 97 7.4E-40 T 12-10-2018 PA257_5072 41360086101b273b4058bac938d4ee95 76 Pfam PF03869 Arc-like DNA binding domain 15 54 1.4E-10 T 12-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 PA257_5072 41360086101b273b4058bac938d4ee95 76 Gene3D G3DSA:1.10.1220.10 2 69 1.3E-18 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PA257_5072 41360086101b273b4058bac938d4ee95 76 SUPERFAMILY SSF47598 16 67 1.43E-14 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PA257_5646 002e46bd47c649ac926526afaf4eb778 374 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 55 159 1.3E-44 T 12-10-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 PA257_5646 002e46bd47c649ac926526afaf4eb778 374 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 292 370 4.2E-21 T 12-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal PA257_0765 f7075e74d2e033f7050e338489493a48 117 Pfam PF16085 Bacteriophage holin Hol, superfamily III 1 112 2.5E-62 T 12-10-2018 IPR032128 Pyocin R2, holin PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 1.2E-51 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 198 1.2E-51 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 216 235 1.2E-51 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 1.2E-51 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 1.2E-51 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 1.2E-51 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 1.2E-51 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 311 337 1.2E-51 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 1.2E-51 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 266 285 1.2E-51 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 SUPERFAMILY SSF53850 29 366 9.32E-90 T 12-10-2018 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 Pfam PF13416 Bacterial extracellular solute-binding protein 45 319 1.8E-26 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 Gene3D G3DSA:3.40.190.10 31 333 1.4E-120 T 12-10-2018 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 Gene3D G3DSA:3.40.190.10 134 361 1.4E-120 T 12-10-2018 PA257_2965 8058aa8cd668ec5777dab32fb16018b6 367 PIRSF PIRSF019574 1 367 1.9E-117 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PA257_0042 cdb24be0b673d70d9f2777e63ba15443 125 Pfam PF08883 Dopa 4,5-dioxygenase family 12 111 6.8E-34 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase PA257_0042 cdb24be0b673d70d9f2777e63ba15443 125 PIRSF PIRSF028139 2 115 2.0E-47 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase PA257_0042 cdb24be0b673d70d9f2777e63ba15443 125 Gene3D G3DSA:3.30.70.1240 2 120 8.9E-40 T 12-10-2018 IPR023389 DOPA-like superfamily PA257_0042 cdb24be0b673d70d9f2777e63ba15443 125 SUPERFAMILY SSF143410 2 113 3.01E-45 T 12-10-2018 IPR023389 DOPA-like superfamily PA257_2375 769795433bda0b2ec5ecc5c59eba3196 319 Pfam PF12697 Alpha/beta hydrolase family 57 302 1.2E-18 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2375 769795433bda0b2ec5ecc5c59eba3196 319 Gene3D G3DSA:3.40.50.1820 33 316 7.8E-118 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2375 769795433bda0b2ec5ecc5c59eba3196 319 SUPERFAMILY SSF53474 31 317 1.51E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6614 24493688c939210274733bc17a4d6305 251 Gene3D G3DSA:3.40.50.10090 35 169 8.1E-92 T 12-10-2018 PA257_6614 24493688c939210274733bc17a4d6305 251 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 244 3.6E-37 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6614 24493688c939210274733bc17a4d6305 251 SUPERFAMILY SSF69618 3 249 5.75E-55 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PA257_6614 24493688c939210274733bc17a4d6305 251 Gene3D G3DSA:3.40.50.10090 6 243 8.1E-92 T 12-10-2018 PA257_3830 9d27948391cc5bf02ab8232e63107bab 515 Pfam PF13556 PucR C-terminal helix-turn-helix domain 429 487 7.2E-19 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain PA257_3830 9d27948391cc5bf02ab8232e63107bab 515 Pfam PF07905 Purine catabolism regulatory protein-like family 8 123 3.7E-31 T 12-10-2018 IPR012914 Purine catabolism PurC-like domain PA257_3830 9d27948391cc5bf02ab8232e63107bab 515 Gene3D G3DSA:1.10.10.2840 362 492 4.0E-18 T 12-10-2018 PA257_1750 80d5fdf6347d0133c58bb3867e1d0d88 108 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.8E-46 T 12-10-2018 IPR004480 Monothiol glutaredoxin-related PA257_1750 80d5fdf6347d0133c58bb3867e1d0d88 108 PIRSF PIRSF005894 1 107 2.2E-50 T 12-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 PA257_1750 80d5fdf6347d0133c58bb3867e1d0d88 108 Pfam PF00462 Glutaredoxin 16 80 1.5E-18 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PA257_1750 80d5fdf6347d0133c58bb3867e1d0d88 108 Gene3D G3DSA:3.40.30.10 2 107 1.1E-31 T 12-10-2018 PA257_1750 80d5fdf6347d0133c58bb3867e1d0d88 108 SUPERFAMILY SSF52833 1 103 1.53E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_3028 18ef204df3e1d1d6e3e18c9b50dee967 211 Gene3D G3DSA:1.20.120.1760 9 202 9.8E-22 T 12-10-2018 PA257_3028 18ef204df3e1d1d6e3e18c9b50dee967 211 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 96 9.9E-10 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PA257_2406 4e6c46798f76019ab4f18f9e3a7b0d13 250 Gene3D G3DSA:3.40.1010.10 5 139 1.5E-30 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PA257_2406 4e6c46798f76019ab4f18f9e3a7b0d13 250 SUPERFAMILY SSF53790 2 240 3.4E-49 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PA257_2406 4e6c46798f76019ab4f18f9e3a7b0d13 250 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 7 239 2.8E-66 T 12-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 PA257_2406 4e6c46798f76019ab4f18f9e3a7b0d13 250 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 221 2.6E-47 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PA257_2406 4e6c46798f76019ab4f18f9e3a7b0d13 250 PIRSF PIRSF036427 5 246 2.4E-69 T 12-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 PA257_2406 4e6c46798f76019ab4f18f9e3a7b0d13 250 Gene3D G3DSA:3.30.950.10 140 245 6.4E-17 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PA257_3321 a6d40290994ced2e834a9e4a5886b953 173 Gene3D G3DSA:3.40.50.300 5 171 1.8E-54 T 12-10-2018 PA257_3321 a6d40290994ced2e834a9e4a5886b953 173 Pfam PF13671 AAA domain 9 139 2.3E-10 T 12-10-2018 PA257_3321 a6d40290994ced2e834a9e4a5886b953 173 SUPERFAMILY SSF52540 8 167 2.18E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3321 a6d40290994ced2e834a9e4a5886b953 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 8 168 1.5E-65 T 12-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 PA257_1456 7d1f5cf0e8a7b7c931393b703fe5468a 105 SUPERFAMILY SSF102705 2 101 7.85E-23 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily PA257_1456 7d1f5cf0e8a7b7c931393b703fe5468a 105 Gene3D G3DSA:3.30.70.120 1 103 3.7E-41 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PA257_6343 3974c7774f7d6094cb9f4a803c30daf9 231 SUPERFAMILY SSF110997 152 225 3.14E-17 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_6343 3974c7774f7d6094cb9f4a803c30daf9 231 Pfam PF05036 Sporulation related domain 152 222 3.3E-16 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 PA257_6343 3974c7774f7d6094cb9f4a803c30daf9 231 Gene3D G3DSA:3.30.70.1070 148 228 1.4E-18 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PA257_1948 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 3.3E-15 T 12-10-2018 PA257_1948 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 3.3E-15 T 12-10-2018 PA257_1948 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.3E-15 T 12-10-2018 PA257_1948 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.3E-15 T 12-10-2018 PA257_1948 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 Gene3D G3DSA:3.30.9.30 40 273 5.0E-94 T 12-10-2018 PA257_1948 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 Gene3D G3DSA:3.50.50.60 9 345 5.0E-94 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1948 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 Pfam PF01494 FAD binding domain 7 343 2.3E-24 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 PA257_1948 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 SUPERFAMILY SSF51905 6 371 5.18E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_4144 18bd32c94b7832943fa7cede502cb9bc 302 Hamap MF_00313 Glutaminase [glsA]. 1 302 47.144 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 PA257_4144 18bd32c94b7832943fa7cede502cb9bc 302 Pfam PF04960 Glutaminase 19 302 4.3E-111 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 PA257_4144 18bd32c94b7832943fa7cede502cb9bc 302 Gene3D G3DSA:3.40.710.10 1 302 1.5E-108 T 12-10-2018 PA257_4144 18bd32c94b7832943fa7cede502cb9bc 302 TIGRFAM TIGR03814 Gln_ase: glutaminase A 5 302 9.7E-129 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 PA257_4144 18bd32c94b7832943fa7cede502cb9bc 302 SUPERFAMILY SSF56601 1 302 4.38E-109 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PA257_6787 66f65526e605639ca22f8ae7fd9ef315 140 Gene3D G3DSA:3.30.1330.40 8 139 3.2E-34 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_6787 66f65526e605639ca22f8ae7fd9ef315 140 Pfam PF01042 Endoribonuclease L-PSP 26 133 6.6E-22 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PA257_6787 66f65526e605639ca22f8ae7fd9ef315 140 SUPERFAMILY SSF55298 24 137 2.83E-32 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PA257_1344 58ef00506a67534ba1c9276a1b566c8a 319 Gene3D G3DSA:3.40.1780.10 2 308 3.2E-110 T 12-10-2018 PA257_1344 58ef00506a67534ba1c9276a1b566c8a 319 SUPERFAMILY SSF111337 2 308 8.24E-126 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PA257_1344 58ef00506a67534ba1c9276a1b566c8a 319 Gene3D G3DSA:2.40.10.240 36 131 3.2E-110 T 12-10-2018 PA257_1344 58ef00506a67534ba1c9276a1b566c8a 319 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 309 41.325 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PA257_1344 58ef00506a67534ba1c9276a1b566c8a 319 Pfam PF02547 Queuosine biosynthesis protein 2 308 6.4E-123 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PA257_1344 58ef00506a67534ba1c9276a1b566c8a 319 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 309 8.0E-137 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PA257_3639 2fef0990f190be6e90b2129e273296c2 388 Pfam PF07690 Major Facilitator Superfamily 9 229 9.9E-24 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_3639 2fef0990f190be6e90b2129e273296c2 388 SUPERFAMILY SSF103473 3 375 5.75E-53 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3639 2fef0990f190be6e90b2129e273296c2 388 Gene3D G3DSA:1.20.1250.20 2 371 2.6E-45 T 12-10-2018 PA257_3495 8de07e387122b88e97a5e4c9f558541e 385 Gene3D G3DSA:1.20.1090.10 185 383 2.9E-62 T 12-10-2018 PA257_3495 8de07e387122b88e97a5e4c9f558541e 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PA257_3495 8de07e387122b88e97a5e4c9f558541e 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 371 6.5E-113 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 PA257_3495 8de07e387122b88e97a5e4c9f558541e 385 SUPERFAMILY SSF56796 3 381 7.46E-115 T 12-10-2018 PA257_3495 8de07e387122b88e97a5e4c9f558541e 385 Gene3D G3DSA:3.40.50.1970 1 183 2.5E-55 T 12-10-2018 PA257_0685 dd3961a70d251896170b07c891e9a6e7 139 Pfam PF06476 Protein of unknown function (DUF1090) 29 128 2.4E-34 T 12-10-2018 IPR009468 Protein of unknown function DUF1090 PA257_3582 14a172047736140b84ada895cf2cfa37 55 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 1.2E-9 T 12-10-2018 IPR019626 Stress-induced protein, KGG, repeat PA257_3582 14a172047736140b84ada895cf2cfa37 55 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 4.8E-9 T 12-10-2018 IPR019626 Stress-induced protein, KGG, repeat PA257_0557 b6f9f92e232572fdf2cc930855c6e74f 496 SUPERFAMILY SSF54373 297 401 1.5E-17 T 12-10-2018 PA257_0557 b6f9f92e232572fdf2cc930855c6e74f 496 Gene3D G3DSA:3.50.50.60 24 460 4.4E-84 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0557 b6f9f92e232572fdf2cc930855c6e74f 496 PRINTS PR00757 Flavin-containing amine oxidase signature 29 48 1.6E-10 T 12-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PA257_0557 b6f9f92e232572fdf2cc930855c6e74f 496 PRINTS PR00757 Flavin-containing amine oxidase signature 403 425 1.6E-10 T 12-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PA257_0557 b6f9f92e232572fdf2cc930855c6e74f 496 PRINTS PR00757 Flavin-containing amine oxidase signature 434 451 1.6E-10 T 12-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PA257_0557 b6f9f92e232572fdf2cc930855c6e74f 496 Pfam PF01593 Flavin containing amine oxidoreductase 37 452 2.6E-47 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 PA257_0557 b6f9f92e232572fdf2cc930855c6e74f 496 SUPERFAMILY SSF51905 26 456 1.78E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_2640 f291ffd469cf4d296b0982f6f85ab5b3 556 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 25 287 5.4E-119 T 12-10-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB PA257_2640 f291ffd469cf4d296b0982f6f85ab5b3 556 SUPERFAMILY SSF110849 34 137 5.23E-10 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PA257_3375 57db0b079963a2bbcec5bbdcba7e246f 401 Gene3D G3DSA:1.20.1250.20 209 392 4.4E-11 T 12-10-2018 PA257_3375 57db0b079963a2bbcec5bbdcba7e246f 401 Gene3D G3DSA:1.20.1250.20 16 194 8.0E-11 T 12-10-2018 PA257_3375 57db0b079963a2bbcec5bbdcba7e246f 401 SUPERFAMILY SSF103473 17 389 3.27E-29 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3375 57db0b079963a2bbcec5bbdcba7e246f 401 Pfam PF07690 Major Facilitator Superfamily 20 229 1.3E-8 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_0546 5797163efe7734cd5454190d8b7d54e7 682 SMART SM00283 413 674 2.0E-96 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_0546 5797163efe7734cd5454190d8b7d54e7 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 538 4.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_0546 5797163efe7734cd5454190d8b7d54e7 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 4.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_0546 5797163efe7734cd5454190d8b7d54e7 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 540 569 4.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PA257_0546 5797163efe7734cd5454190d8b7d54e7 682 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 39 148 9.4E-26 T 12-10-2018 IPR029095 NarX-like, N-terminal PA257_0546 5797163efe7734cd5454190d8b7d54e7 682 SUPERFAMILY SSF58104 374 675 2.09E-67 T 12-10-2018 PA257_0546 5797163efe7734cd5454190d8b7d54e7 682 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 459 642 1.0E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PA257_0546 5797163efe7734cd5454190d8b7d54e7 682 Gene3D G3DSA:1.10.287.950 350 676 5.4E-65 T 12-10-2018 PA257_0071 28651907ed0e6320af188d2655dcd4b4 610 Pfam PF00733 Asparagine synthase 242 604 5.2E-82 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PA257_0071 28651907ed0e6320af188d2655dcd4b4 610 Gene3D G3DSA:3.60.20.10 3 186 8.0E-62 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_0071 28651907ed0e6320af188d2655dcd4b4 610 Pfam PF13537 Glutamine amidotransferase domain 48 170 5.9E-44 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PA257_0071 28651907ed0e6320af188d2655dcd4b4 610 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 537 1.7E-176 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PA257_0071 28651907ed0e6320af188d2655dcd4b4 610 SUPERFAMILY SSF52402 231 578 1.2E-59 T 12-10-2018 PA257_0071 28651907ed0e6320af188d2655dcd4b4 610 PIRSF PIRSF001589 1 610 4.4E-140 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PA257_0071 28651907ed0e6320af188d2655dcd4b4 610 SUPERFAMILY SSF56235 1 226 3.26E-62 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_5892 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 395 463 2.0E-8 T 12-10-2018 IPR003399 Mce/MlaD PA257_5892 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 280 369 2.5E-11 T 12-10-2018 IPR003399 Mce/MlaD PA257_5892 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 516 602 3.8E-10 T 12-10-2018 IPR003399 Mce/MlaD PA257_5892 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 156 216 4.7E-11 T 12-10-2018 IPR003399 Mce/MlaD PA257_5892 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 41 131 1.8E-11 T 12-10-2018 IPR003399 Mce/MlaD PA257_5892 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 631 691 2.8E-7 T 12-10-2018 IPR003399 Mce/MlaD PA257_0397 211b825fdb459bb325e73113f9e66c59 309 Gene3D G3DSA:2.120.10.30 45 297 3.1E-8 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PA257_0397 211b825fdb459bb325e73113f9e66c59 309 SUPERFAMILY SSF50956 13 304 2.35E-57 T 12-10-2018 PA257_0397 211b825fdb459bb325e73113f9e66c59 309 Pfam PF06977 SdiA-regulated 51 302 8.2E-107 T 12-10-2018 IPR009722 SdiA-regulated PA257_3461 bbb41dbc48dc8695ae194bab2d36ceac 68 Pfam PF10389 Bacteriophage coat protein B 24 68 1.4E-16 T 12-10-2018 IPR008020 Capsid protein G8P PA257_3452 bbb41dbc48dc8695ae194bab2d36ceac 68 Pfam PF10389 Bacteriophage coat protein B 24 68 1.4E-16 T 12-10-2018 IPR008020 Capsid protein G8P PA257_3433 bbb41dbc48dc8695ae194bab2d36ceac 68 Pfam PF10389 Bacteriophage coat protein B 24 68 1.4E-16 T 12-10-2018 IPR008020 Capsid protein G8P PA257_3443 bbb41dbc48dc8695ae194bab2d36ceac 68 Pfam PF10389 Bacteriophage coat protein B 24 68 1.4E-16 T 12-10-2018 IPR008020 Capsid protein G8P PA257_4046 356f3a3dadef5372d1f3352c1605cc17 113 Pfam PF06877 Regulator of ribonuclease activity B 9 104 7.5E-21 T 12-10-2018 IPR009671 Regulator of ribonuclease activity B domain PA257_4046 356f3a3dadef5372d1f3352c1605cc17 113 SUPERFAMILY SSF89946 5 107 3.4E-23 T 12-10-2018 IPR036701 RraB-like superfamily PA257_1547 55910d155b5e7f8354db6aaf1e1dff17 132 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 25 118 2.3E-33 T 12-10-2018 IPR039366 YscW/ExsB PA257_4086 cedc92548bfc18e0f550eb13d4a3be2e 289 Gene3D G3DSA:2.120.10.30 30 284 3.2E-12 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PA257_4086 cedc92548bfc18e0f550eb13d4a3be2e 289 SUPERFAMILY SSF101898 41 283 4.18E-18 T 12-10-2018 PA257_4086 cedc92548bfc18e0f550eb13d4a3be2e 289 Pfam PF03088 Strictosidine synthase 144 189 1.2E-4 T 12-10-2018 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 PA257_5713 cb542259079f1ee362b9b7fe4954eac1 426 Gene3D G3DSA:1.10.443.10 127 320 1.4E-31 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_5713 cb542259079f1ee362b9b7fe4954eac1 426 Pfam PF00589 Phage integrase family 145 296 3.6E-24 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_5713 cb542259079f1ee362b9b7fe4954eac1 426 SUPERFAMILY SSF56349 1 303 1.32E-39 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_5713 cb542259079f1ee362b9b7fe4954eac1 426 Gene3D G3DSA:1.10.150.130 1 108 1.3E-8 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal PA257_6139 e83e19a45df3cfe049da5b26841e418a 232 Pfam PF00005 ABC transporter 17 161 1.8E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_6139 e83e19a45df3cfe049da5b26841e418a 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 4.6E-106 T 12-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE PA257_6139 e83e19a45df3cfe049da5b26841e418a 232 SUPERFAMILY SSF52540 2 221 3.22E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6139 e83e19a45df3cfe049da5b26841e418a 232 Gene3D G3DSA:3.40.50.300 1 226 1.1E-60 T 12-10-2018 PA257_6139 e83e19a45df3cfe049da5b26841e418a 232 SMART SM00382 26 211 1.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_1479 8f20f1317b94b201dae343e472d57a44 228 SUPERFAMILY SSF160246 4 68 1.2E-13 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily PA257_6359 bfc68d8633dcd3e11146c7eb01e5754d 111 SUPERFAMILY SSF101386 3 96 6.32E-25 T 12-10-2018 PA257_6359 bfc68d8633dcd3e11146c7eb01e5754d 111 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 92 20.982 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 PA257_6359 bfc68d8633dcd3e11146c7eb01e5754d 111 Gene3D G3DSA:1.10.287.1080 1 98 2.6E-29 T 12-10-2018 PA257_6359 bfc68d8633dcd3e11146c7eb01e5754d 111 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 95 1.6E-17 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 PA257_6359 bfc68d8633dcd3e11146c7eb01e5754d 111 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 92 4.1E-29 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 PA257_6051 ea5137dee3e61fa880e21489d2481ef2 272 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 27 156 4.3E-8 T 12-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal PA257_6051 ea5137dee3e61fa880e21489d2481ef2 272 Pfam PF09356 Phage conserved hypothetical protein BR0599 188 263 2.8E-17 T 12-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal PA257_6051 ea5137dee3e61fa880e21489d2481ef2 272 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 21 263 1.7E-38 T 12-10-2018 IPR011928 Bacteriophage phiJL001, Gp84 PA257_0236 001cebb64f2c2e0a7b3b1b4066861275 287 Pfam PF01039 Carboxyl transferase domain 18 235 1.8E-14 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PA257_0236 001cebb64f2c2e0a7b3b1b4066861275 287 SUPERFAMILY SSF52096 4 236 8.71E-37 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_0236 001cebb64f2c2e0a7b3b1b4066861275 287 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 11 281 3.2E-117 T 12-10-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 PA257_0236 001cebb64f2c2e0a7b3b1b4066861275 287 Gene3D G3DSA:3.90.226.10 3 240 3.8E-50 T 12-10-2018 PA257_3682 2a286a18f145559875538c0221186788 317 Gene3D G3DSA:2.60.120.1440 112 232 7.5E-20 T 12-10-2018 PA257_3682 2a286a18f145559875538c0221186788 317 Pfam PF04773 FecR protein 114 205 9.4E-20 T 12-10-2018 IPR006860 FecR protein PA257_3682 2a286a18f145559875538c0221186788 317 PIRSF PIRSF018266 1 317 2.6E-81 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_3682 2a286a18f145559875538c0221186788 317 Pfam PF16220 Domain of unknown function (DUF4880) 11 50 4.2E-12 T 12-10-2018 IPR032623 FecR, N-terminal PA257_0169 42a61321e9aa06bca657ece4e0aaf5c4 208 SUPERFAMILY SSF52309 40 197 3.36E-45 T 12-10-2018 PA257_0169 42a61321e9aa06bca657ece4e0aaf5c4 208 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 42 183 5.0E-49 T 12-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 PA257_0169 42a61321e9aa06bca657ece4e0aaf5c4 208 Gene3D G3DSA:3.40.50.450 33 206 6.2E-55 T 12-10-2018 PA257_2614 c91e40316ad8e781f22dcf6ba1641bda 199 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 64 167 4.2E-43 T 12-10-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 PA257_4981 f1d8a9eea06bc62e6183c693e27ecff5 472 PIRSF PIRSF006060 1 469 2.4E-75 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_4981 f1d8a9eea06bc62e6183c693e27ecff5 472 Gene3D G3DSA:1.20.1740.10 11 459 3.2E-57 T 12-10-2018 PA257_4981 f1d8a9eea06bc62e6183c693e27ecff5 472 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PA257_4981 f1d8a9eea06bc62e6183c693e27ecff5 472 Pfam PF00324 Amino acid permease 19 453 2.1E-114 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_3536 1045e4073706a424bbe88be22322151c 104 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 95 1.7E-22 T 12-10-2018 PA257_3536 1045e4073706a424bbe88be22322151c 104 SUPERFAMILY SSF54292 18 100 8.65E-24 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_3536 1045e4073706a424bbe88be22322151c 104 Gene3D G3DSA:3.10.20.440 3 102 8.5E-18 T 12-10-2018 PA257_1280 52d3b17e26582e978685178a42b4bac0 218 Pfam PF03162 Tyrosine phosphatase family 51 164 9.9E-10 T 12-10-2018 IPR004861 Atypical dual-specificity phosphatase Siw14-like PA257_1280 52d3b17e26582e978685178a42b4bac0 218 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 130 140 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 PA257_1280 52d3b17e26582e978685178a42b4bac0 218 SUPERFAMILY SSF52799 44 165 1.5E-23 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like PA257_1280 52d3b17e26582e978685178a42b4bac0 218 Gene3D G3DSA:3.90.190.10 35 195 1.1E-43 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like PA257_2637 7da764d03e77cc9928b3957ee0313f21 264 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 13 224 3.0E-88 T 12-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 PA257_2637 7da764d03e77cc9928b3957ee0313f21 264 Pfam PF08900 Domain of unknown function (DUF1845) 12 222 1.0E-78 T 12-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 PA257_1274 4413f6a438fa04d19d0f1ab9bce98c22 220 SUPERFAMILY SSF161098 12 203 9.81E-36 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1274 4413f6a438fa04d19d0f1ab9bce98c22 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 213 3.7E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_1274 4413f6a438fa04d19d0f1ab9bce98c22 220 Gene3D G3DSA:1.10.3720.10 14 212 1.5E-30 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1162 95345d610ae3968f7f6db3a07e3cacf1 50 Pfam PF03889 Domain of unknown function 5 40 2.3E-18 T 12-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 PA257_0321 8f6a7337ca14f080818a6ff72d0b64ab 47 Pfam PF12728 Helix-turn-helix domain 2 41 1.5E-6 T 12-10-2018 PA257_4597 8d242739cbbb7f7c05d89ba7bb3a9fb3 311 Gene3D G3DSA:3.40.250.10 193 310 6.1E-16 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_4597 8d242739cbbb7f7c05d89ba7bb3a9fb3 311 SMART SM00450 209 306 2.3E-8 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_4597 8d242739cbbb7f7c05d89ba7bb3a9fb3 311 Pfam PF00581 Rhodanese-like domain 209 302 1.6E-8 T 12-10-2018 IPR001763 Rhodanese-like domain PA257_4597 8d242739cbbb7f7c05d89ba7bb3a9fb3 311 Pfam PF09335 SNARE associated Golgi protein 29 155 4.1E-14 T 12-10-2018 IPR032816 SNARE associated Golgi protein PA257_4597 8d242739cbbb7f7c05d89ba7bb3a9fb3 311 SUPERFAMILY SSF52821 192 307 7.2E-20 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily PA257_1298 904d2473613dd43d7d72d40c811dd252 667 Gene3D G3DSA:2.40.170.20 158 667 1.9E-54 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PA257_1298 904d2473613dd43d7d72d40c811dd252 667 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 144 4.8E-19 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain PA257_1298 904d2473613dd43d7d72d40c811dd252 667 Pfam PF00593 TonB dependent receptor 219 666 8.7E-29 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PA257_1298 904d2473613dd43d7d72d40c811dd252 667 SUPERFAMILY SSF56935 44 667 4.71E-82 T 12-10-2018 PA257_1298 904d2473613dd43d7d72d40c811dd252 667 Gene3D G3DSA:2.170.130.10 47 156 1.5E-21 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PA257_6161 77cdefbbc8df2671676ca1ee4ff9d940 204 SUPERFAMILY SSF81342 5 197 2.98E-33 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PA257_6161 77cdefbbc8df2671676ca1ee4ff9d940 204 Gene3D G3DSA:1.20.950.20 1 183 9.2E-19 T 12-10-2018 PA257_6161 77cdefbbc8df2671676ca1ee4ff9d940 204 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 159 181 3.4E-5 T 12-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 PA257_6161 77cdefbbc8df2671676ca1ee4ff9d940 204 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 8 31 3.4E-5 T 12-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 PA257_6161 77cdefbbc8df2671676ca1ee4ff9d940 204 Pfam PF01292 Prokaryotic cytochrome b561 6 185 1.0E-22 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PA257_5435 4782a3d3b48ab8160ead0ec53b9f56fb 446 Gene3D G3DSA:1.20.1420.20 30 429 9.8E-83 T 12-10-2018 IPR038352 Imelysin-like domain superfamily PA257_5435 4782a3d3b48ab8160ead0ec53b9f56fb 446 Pfam PF09375 Imelysin 67 423 3.9E-97 T 12-10-2018 IPR018976 Imelysin-like domain PA257_2681 663569d7963fd3a21f8a9fe257a1d90c 91 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 7 83 2.0E-6 T 12-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 PA257_2681 663569d7963fd3a21f8a9fe257a1d90c 91 Pfam PF11112 Pyocin activator protein PrtN 3 77 5.8E-31 T 12-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 PA257_2053 72b1692138093c6e467f4e807a46aeaf 73 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 7.7E-22 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane PA257_6203 04df5e6187f32b81922140b3213cc99c 231 SMART SM00257 35 79 3.5E-11 T 12-10-2018 IPR018392 LysM domain PA257_6203 04df5e6187f32b81922140b3213cc99c 231 Gene3D G3DSA:3.10.350.10 35 77 6.8E-13 T 12-10-2018 IPR036779 LysM domain superfamily PA257_6203 04df5e6187f32b81922140b3213cc99c 231 SUPERFAMILY SSF51261 36 228 2.04E-45 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_6203 04df5e6187f32b81922140b3213cc99c 231 Pfam PF01551 Peptidase family M23 131 224 7.8E-28 T 12-10-2018 IPR016047 Peptidase M23 PA257_6203 04df5e6187f32b81922140b3213cc99c 231 Pfam PF01476 LysM domain 36 76 3.1E-14 T 12-10-2018 IPR018392 LysM domain PA257_6203 04df5e6187f32b81922140b3213cc99c 231 Gene3D G3DSA:2.70.70.10 106 228 4.8E-32 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_2521 f95ed9f8952c3944baf5d3960b9960dd 132 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 14 129 2.7E-43 T 12-10-2018 IPR021877 Protein of unknown function DUF3487 PA257_2521 f95ed9f8952c3944baf5d3960b9960dd 132 Pfam PF11990 Protein of unknown function (DUF3487) 12 130 5.4E-42 T 12-10-2018 IPR021877 Protein of unknown function DUF3487 PA257_5211 3a063235eceff1e1383b0215287972d1 245 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 45 242 1.7E-82 T 12-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 PA257_4571 a798d52ca1ce288cab75ef45eaffc6b9 62 Pfam PF07869 Protein of unknown function (DUF1656) 4 56 2.2E-11 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 PA257_3832 dda3deae263e830ff22023f3bfdd5dea 408 Pfam PF10783 Protein of unknown function (DUF2599) 302 408 2.4E-27 T 12-10-2018 IPR019719 Protein of unknown function DUF2599 PA257_1048 1caaa87e302e4a29bcb73647bff84733 434 Gene3D G3DSA:2.40.160.180 23 427 3.2E-60 T 12-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily PA257_1048 1caaa87e302e4a29bcb73647bff84733 434 Pfam PF04966 Carbohydrate-selective porin, OprB family 64 427 5.7E-68 T 12-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 PA257_2905 b180eee267a422bd6af96f5ecc0a8a76 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 473 1.5E-128 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PA257_2905 b180eee267a422bd6af96f5ecc0a8a76 486 Pfam PF00361 Proton-conducting membrane transporter 122 419 1.7E-80 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PA257_2905 b180eee267a422bd6af96f5ecc0a8a76 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 474 17.864 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PA257_6470 99e5fd91052248bfc8526b2a84ce4262 90 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 87 6.6E-18 T 12-10-2018 IPR008473 Putative 3TM holin, Phage holin 3 PA257_1895 5d214d7559473fbe60d877393770424f 366 PIRSF PIRSF007313 1 360 8.8E-157 T 12-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 PA257_1895 5d214d7559473fbe60d877393770424f 366 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 1.3E-161 T 12-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 PA257_3752 5a6ed574a8829eba3c47f046def9a14d 245 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 245 141.502 T 12-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 PA257_3752 5a6ed574a8829eba3c47f046def9a14d 245 Gene3D G3DSA:1.20.910.10 1 244 2.2E-78 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_3752 5a6ed574a8829eba3c47f046def9a14d 245 Pfam PF03070 TENA/THI-4/PQQC family 9 217 1.6E-69 T 12-10-2018 IPR004305 Thiaminase-2/PQQC PA257_3752 5a6ed574a8829eba3c47f046def9a14d 245 SUPERFAMILY SSF48613 1 243 5.56E-78 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_3752 5a6ed574a8829eba3c47f046def9a14d 245 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 1 236 3.1E-124 T 12-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 PA257_5233 924bed6bd83f2389df6f50f5755109d2 507 Pfam PF07916 TraG-like protein, N-terminal region 10 488 3.6E-96 T 12-10-2018 IPR012931 TraG-like, N-terminal PA257_5219 847b4a831ae3a8935ca5e956056a628f 119 Pfam PF11190 Protein of unknown function (DUF2976) 32 118 1.3E-32 T 12-10-2018 IPR021356 Integrating conjugative element protein PFL4702 PA257_5219 847b4a831ae3a8935ca5e956056a628f 119 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 16 119 1.3E-44 T 12-10-2018 IPR021356 Integrating conjugative element protein PFL4702 PA257_5161 55da7dc938f034ccf415d5c5317b2a9c 273 Pfam PF04294 VanW like protein 70 203 2.8E-33 T 12-10-2018 IPR007391 Vancomycin resistance VanW PA257_1704 fa0d7c7ed66ae7083de53031413b67c5 176 SUPERFAMILY SSF81342 2 172 8.63E-29 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PA257_1704 fa0d7c7ed66ae7083de53031413b67c5 176 Pfam PF01292 Prokaryotic cytochrome b561 5 172 6.1E-27 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PA257_2830 6819ac26c117e44347677bdb0f398c47 276 Pfam PF00561 alpha/beta hydrolase fold 24 256 1.6E-24 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2830 6819ac26c117e44347677bdb0f398c47 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 6.2E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2830 6819ac26c117e44347677bdb0f398c47 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 6.2E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2830 6819ac26c117e44347677bdb0f398c47 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 6.2E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_2830 6819ac26c117e44347677bdb0f398c47 276 Gene3D G3DSA:3.40.50.1820 1 275 1.6E-91 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2830 6819ac26c117e44347677bdb0f398c47 276 SUPERFAMILY SSF53474 1 275 5.09E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_6386 0229a2302441b6c2cb73e60df59b997f 283 Gene3D G3DSA:1.10.3720.10 85 277 4.5E-39 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6386 0229a2302441b6c2cb73e60df59b997f 283 SUPERFAMILY SSF161098 87 271 9.42E-43 T 12-10-2018 IPR035906 MetI-like superfamily PA257_6386 0229a2302441b6c2cb73e60df59b997f 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 268 2.0E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_2957 84994d8bcba8b6bacb65b5a7b7c34982 362 SUPERFAMILY SSF51679 14 350 1.57E-79 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_2957 84994d8bcba8b6bacb65b5a7b7c34982 362 Gene3D G3DSA:3.20.20.30 9 357 1.8E-105 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_2957 84994d8bcba8b6bacb65b5a7b7c34982 362 Pfam PF00296 Luciferase-like monooxygenase 21 324 7.7E-76 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_3466 dc1d9f907364e31d610d78680606c90f 333 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 118 1.6E-25 T 12-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain PA257_5951 3d97ccf014f605f84f5b177ca4508628 104 Pfam PF11006 Protein of unknown function (DUF2845) 25 100 1.5E-21 T 12-10-2018 IPR021268 Protein of unknown function DUF2845 PA257_6253 c3d57792d30b8422a8afc242d0db6228 152 Pfam PF06853 Protein of unknown function (DUF1249) 27 145 6.1E-44 T 12-10-2018 IPR009659 Protein of unknown function DUF1249 PA257_6465 a5977b7217cf4b3a70e0a965c80d3c82 338 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 6 336 1.8E-135 T 12-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid PA257_6465 a5977b7217cf4b3a70e0a965c80d3c82 338 Pfam PF05125 Phage major capsid protein, P2 family 8 334 8.2E-147 T 12-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid PA257_5385 0a0790f6dbf7a2b36e5dff0017c33009 421 Pfam PF14258 Domain of unknown function (DUF4350) 44 113 3.8E-13 T 12-10-2018 IPR025646 Domain of unknown function DUF4350 PA257_4332 15704a0f5adf481eb987eb14fe23d700 296 Pfam PF00691 OmpA family 145 234 2.8E-17 T 12-10-2018 IPR006665 OmpA-like domain PA257_4332 15704a0f5adf481eb987eb14fe23d700 296 Gene3D G3DSA:3.30.1330.60 84 249 1.9E-44 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_4332 15704a0f5adf481eb987eb14fe23d700 296 SUPERFAMILY SSF103088 127 240 1.7E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_4332 15704a0f5adf481eb987eb14fe23d700 296 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 7.2E-22 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain PA257_1455 34c88d17435732d362d76a7c80b37fbe 92 Pfam PF09360 Iron-binding zinc finger CDGSH type 55 76 1.9E-9 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 PA257_1455 34c88d17435732d362d76a7c80b37fbe 92 Gene3D G3DSA:3.40.5.90 50 83 2.5E-9 T 12-10-2018 PA257_2316 0265ee7715a479146d7bbc4e015131c4 416 Pfam PF12704 MacB-like periplasmic core domain 27 232 1.3E-16 T 12-10-2018 IPR025857 MacB-like periplasmic core domain PA257_2316 0265ee7715a479146d7bbc4e015131c4 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 416 1.3E-161 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 PA257_2316 0265ee7715a479146d7bbc4e015131c4 416 Pfam PF02687 FtsX-like permease family 301 409 4.4E-14 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PA257_4771 985c6423bef39a33b537cdec963f3e06 452 Pfam PF02447 GntP family permease 1 450 3.0E-95 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PA257_3030 a4599e7b4eee9050a87aac199e41a78f 449 Gene3D G3DSA:3.90.190.10 290 433 3.0E-18 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like PA257_3030 a4599e7b4eee9050a87aac199e41a78f 449 SMART SM00195 302 435 1.2E-7 T 12-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 PA257_3030 a4599e7b4eee9050a87aac199e41a78f 449 SUPERFAMILY SSF52799 296 429 2.58E-19 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like PA257_3030 a4599e7b4eee9050a87aac199e41a78f 449 Pfam PF00782 Dual specificity phosphatase, catalytic domain 342 430 1.1E-8 T 12-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 PA257_2192 92beee7600ae1b6dd88f7064a0bb8e05 235 Gene3D G3DSA:2.30.30.830 99 165 1.0E-10 T 12-10-2018 PA257_2192 92beee7600ae1b6dd88f7064a0bb8e05 235 Pfam PF11356 Type II secretion system protein C 36 164 5.3E-22 T 12-10-2018 IPR024961 Type II secretion system protein C, N-terminal PA257_1792 706ffa985546d4d7efc90b493612c911 201 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 51 - T 12-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_1792 706ffa985546d4d7efc90b493612c911 201 Gene3D G3DSA:3.40.630.30 1 201 4.1E-44 T 12-10-2018 PA257_1792 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 115 136 2.7E-25 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_1792 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 97 109 2.7E-25 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_1792 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 65 83 2.7E-25 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_1792 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 137 158 2.7E-25 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_1792 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 159 176 2.7E-25 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_1792 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 2.7E-25 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_1792 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 42 64 2.7E-25 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_1792 706ffa985546d4d7efc90b493612c911 201 SUPERFAMILY SSF55729 1 193 1.82E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_1792 706ffa985546d4d7efc90b493612c911 201 Pfam PF00765 Autoinducer synthase 13 179 9.7E-21 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PA257_0215 865b061068973b8829137a0d744cc892 235 SMART SM00014 104 209 0.0052 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PA257_0215 865b061068973b8829137a0d744cc892 235 Pfam PF01569 PAP2 superfamily 114 206 2.3E-12 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PA257_0215 865b061068973b8829137a0d744cc892 235 Gene3D G3DSA:1.20.144.10 48 228 5.6E-45 T 12-10-2018 PA257_0215 865b061068973b8829137a0d744cc892 235 SUPERFAMILY SSF48317 87 227 4.71E-29 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PA257_5359 91a5bde4301a60cd3c44dca9788ac803 94 Pfam PF12266 Protein of unknown function (DUF3613) 21 87 1.5E-29 T 12-10-2018 IPR022053 Protein of unknown function DUF3613 PA257_6340 2728aa6aa959f51dfa169f7dfbbf72b1 71 Pfam PF01197 Ribosomal protein L31 1 65 1.0E-30 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6340 2728aa6aa959f51dfa169f7dfbbf72b1 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 1.5E-33 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6340 2728aa6aa959f51dfa169f7dfbbf72b1 71 Gene3D G3DSA:2.30.170.50 1 70 5.8E-33 T 12-10-2018 PA257_6340 2728aa6aa959f51dfa169f7dfbbf72b1 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6340 2728aa6aa959f51dfa169f7dfbbf72b1 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.0E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6340 2728aa6aa959f51dfa169f7dfbbf72b1 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.0E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6340 2728aa6aa959f51dfa169f7dfbbf72b1 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6340 2728aa6aa959f51dfa169f7dfbbf72b1 71 SUPERFAMILY SSF143800 1 67 5.49E-28 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6340 2728aa6aa959f51dfa169f7dfbbf72b1 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.851 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_3480 f339ba283ef8968cceff0b472adf2d4d 135 Pfam PF13276 HTH-like domain 39 91 2.4E-12 T 12-10-2018 IPR025948 HTH-like domain PA257_6015 9dfb7f03af05db1ed1d397a27466401c 592 Pfam PF00665 Integrase core domain 151 297 2.2E-15 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PA257_6015 9dfb7f03af05db1ed1d397a27466401c 592 SUPERFAMILY SSF53098 147 343 4.55E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily PA257_6015 9dfb7f03af05db1ed1d397a27466401c 592 Gene3D G3DSA:3.30.420.10 146 355 1.5E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PA257_3141 8d2ab35f4509174169603fb52c4b313b 302 Pfam PF10124 Mu-like prophage major head subunit gpT 160 227 2.6E-10 T 12-10-2018 IPR018774 Bacteriophage Mu, GpT PA257_3141 8d2ab35f4509174169603fb52c4b313b 302 Pfam PF10124 Mu-like prophage major head subunit gpT 8 161 1.2E-56 T 12-10-2018 IPR018774 Bacteriophage Mu, GpT PA257_3141 8d2ab35f4509174169603fb52c4b313b 302 Pfam PF10124 Mu-like prophage major head subunit gpT 232 298 1.5E-22 T 12-10-2018 IPR018774 Bacteriophage Mu, GpT PA257_3883 f0281c6a34c6740e614824c52b24022f 163 Pfam PF11356 Type II secretion system protein C 26 150 8.3E-13 T 12-10-2018 IPR024961 Type II secretion system protein C, N-terminal PA257_3647 165e27c3e0f935c5ca0cd086338892d2 610 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 532 4.9E-149 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PA257_3647 165e27c3e0f935c5ca0cd086338892d2 610 Pfam PF13537 Glutamine amidotransferase domain 48 167 1.3E-45 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PA257_3647 165e27c3e0f935c5ca0cd086338892d2 610 SUPERFAMILY SSF56235 1 224 1.54E-62 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_3647 165e27c3e0f935c5ca0cd086338892d2 610 Pfam PF00733 Asparagine synthase 243 580 1.1E-95 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PA257_3647 165e27c3e0f935c5ca0cd086338892d2 610 PIRSF PIRSF001589 1 609 8.3E-142 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PA257_3647 165e27c3e0f935c5ca0cd086338892d2 610 Gene3D G3DSA:3.60.20.10 2 182 2.3E-61 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_3647 165e27c3e0f935c5ca0cd086338892d2 610 SUPERFAMILY SSF52402 233 574 3.45E-69 T 12-10-2018 PA257_0105 1505677bb7b9248868b4ab143d1a7cfb 498 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 493 1.1E-190 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PA257_0105 1505677bb7b9248868b4ab143d1a7cfb 498 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 493 3.3E-219 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PA257_0442 73c3fc670ed040a57ace31b147910e8c 215 Gene3D G3DSA:1.10.357.10 4 214 5.4E-71 T 12-10-2018 PA257_0442 73c3fc670ed040a57ace31b147910e8c 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0442 73c3fc670ed040a57ace31b147910e8c 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0442 73c3fc670ed040a57ace31b147910e8c 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 3.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PA257_0442 73c3fc670ed040a57ace31b147910e8c 215 SUPERFAMILY SSF46689 7 68 2.19E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0442 73c3fc670ed040a57ace31b147910e8c 215 Pfam PF13972 Bacterial transcriptional repressor 60 203 1.2E-46 T 12-10-2018 IPR025722 Bacterial transcriptional repressor TetR PA257_2361 5559bdc47d6a4b689c9b8795436c98fb 60 TIGRFAM TIGR02459 CbtB: cobalt transporter subunit CbtB (proposed) 3 60 3.7E-25 T 12-10-2018 IPR012667 Cobalt transporter subunit CbtB, putative PA257_2361 5559bdc47d6a4b689c9b8795436c98fb 60 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 11 60 4.7E-23 T 12-10-2018 IPR012667 Cobalt transporter subunit CbtB, putative PA257_6818 57cf0a45b46f71b9396a34decd39f52f 182 Pfam PF11736 Protein of unknown function (DUF3299) 29 175 9.3E-46 T 12-10-2018 IPR021727 Protein of unknown function DUF3299 PA257_6818 57cf0a45b46f71b9396a34decd39f52f 182 Gene3D G3DSA:2.40.50.870 23 181 1.0E-43 T 12-10-2018 PA257_1907 58fae6fac08769dfd27b37ed54edce45 112 ProDom PD052090 YDCA PRECURSOR SIGNAL ECS2024 8 57 7.0E-21 T 12-10-2018 PA257_2504 84398b9280ac09268103ddaf34abcfa1 622 Gene3D G3DSA:1.10.3210.40 32 250 3.7E-40 T 12-10-2018 PA257_2504 84398b9280ac09268103ddaf34abcfa1 622 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 26 243 1.3E-87 T 12-10-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class PA257_2504 84398b9280ac09268103ddaf34abcfa1 622 Pfam PF07514 Putative helicase 27 339 2.9E-128 T 12-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative PA257_2504 84398b9280ac09268103ddaf34abcfa1 622 Gene3D G3DSA:1.10.10.10 490 560 2.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2504 84398b9280ac09268103ddaf34abcfa1 622 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 489 611 2.0E-47 T 12-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal PA257_2504 84398b9280ac09268103ddaf34abcfa1 622 SUPERFAMILY SSF46785 488 612 7.62E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2504 84398b9280ac09268103ddaf34abcfa1 622 Gene3D G3DSA:2.40.10.200 506 606 2.0E-25 T 12-10-2018 PA257_2714 c9b99f0308b7f8fc4656c174162f0fca 1063 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 834 907 2.5E-28 T 12-10-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal PA257_2714 c9b99f0308b7f8fc4656c174162f0fca 1063 Pfam PF06791 Prophage tail length tape measure protein 222 415 1.0E-43 T 12-10-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal PA257_2714 c9b99f0308b7f8fc4656c174162f0fca 1063 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 691 1012 4.3E-54 T 12-10-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal PA257_5582 516ebbe2fa5c1e662f7f3b705b24f87c 251 Pfam PF03746 LamB/YcsF family 8 249 9.4E-93 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PA257_5582 516ebbe2fa5c1e662f7f3b705b24f87c 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 42.581 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PA257_5582 516ebbe2fa5c1e662f7f3b705b24f87c 251 Gene3D G3DSA:3.20.20.370 1 251 8.3E-106 T 12-10-2018 PA257_5582 516ebbe2fa5c1e662f7f3b705b24f87c 251 SUPERFAMILY SSF88713 7 249 1.56E-89 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PA257_6652 a86475788e12356ee9a55f054a84125e 57 Pfam PF09722 Protein of unknown function (DUF2384) 13 54 2.8E-4 T 12-10-2018 IPR024467 Domain of unknown function DUF2384 PA257_6811 47acaaeb4e7fdc17ed844fc5d8897685 416 SUPERFAMILY SSF51905 33 403 2.14E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6811 47acaaeb4e7fdc17ed844fc5d8897685 416 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 408 3.8E-233 T 12-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PA257_6811 47acaaeb4e7fdc17ed844fc5d8897685 416 Gene3D G3DSA:3.30.9.10 115 346 3.5E-110 T 12-10-2018 PA257_6811 47acaaeb4e7fdc17ed844fc5d8897685 416 Gene3D G3DSA:3.50.50.60 34 390 3.5E-110 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_6811 47acaaeb4e7fdc17ed844fc5d8897685 416 Pfam PF01266 FAD dependent oxidoreductase 34 380 1.4E-55 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_5693 0e107014e8b45397b1f0d8015c997f21 73 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 1 73 4.8E-29 T 12-10-2018 IPR021356 Integrating conjugative element protein PFL4702 PA257_5693 0e107014e8b45397b1f0d8015c997f21 73 Pfam PF11190 Protein of unknown function (DUF2976) 1 72 3.7E-22 T 12-10-2018 IPR021356 Integrating conjugative element protein PFL4702 PA257_5862 e611dafdf4219a5c9281fc2623f218cd 333 Gene3D G3DSA:1.10.443.10 154 325 2.1E-41 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_5862 e611dafdf4219a5c9281fc2623f218cd 333 SUPERFAMILY SSF56349 57 316 8.24E-50 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_5862 e611dafdf4219a5c9281fc2623f218cd 333 Pfam PF00589 Phage integrase family 159 308 1.5E-19 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_6701 1fccd6e3293b7cee4f3434398a7ff5c1 78 Gene3D G3DSA:2.30.170.40 2 78 1.0E-34 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6701 1fccd6e3293b7cee4f3434398a7ff5c1 78 SUPERFAMILY SSF143800 2 77 1.67E-31 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6701 1fccd6e3293b7cee4f3434398a7ff5c1 78 Pfam PF00830 Ribosomal L28 family 3 61 1.2E-28 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_6701 1fccd6e3293b7cee4f3434398a7ff5c1 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 22.188 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_6701 1fccd6e3293b7cee4f3434398a7ff5c1 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.5E-29 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0382 1d7794156aef8aa11356bfbe72b42634 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 53 66 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site PA257_0382 1d7794156aef8aa11356bfbe72b42634 256 SMART SM00062 31 250 3.1E-63 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_0382 1d7794156aef8aa11356bfbe72b42634 256 SUPERFAMILY SSF53850 2 250 7.02E-65 T 12-10-2018 PA257_0382 1d7794156aef8aa11356bfbe72b42634 256 Gene3D G3DSA:3.40.190.10 114 212 6.8E-63 T 12-10-2018 PA257_0382 1d7794156aef8aa11356bfbe72b42634 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 248 3.1E-60 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_0382 1d7794156aef8aa11356bfbe72b42634 256 Gene3D G3DSA:3.40.190.10 29 247 6.8E-63 T 12-10-2018 PA257_4768 77462f223b16f4ff0a085f40d6a4923d 154 Pfam PF05433 Glycine zipper 2TM domain 61 100 2.0E-7 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 PA257_4150 755d1cd8ea09f46ce00752b2e1b2eba6 47 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 24 46 5.9E-8 T 12-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PA257_4150 755d1cd8ea09f46ce00752b2e1b2eba6 47 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 24 46 3.1E-10 T 12-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PA257_6319 7ae430ed7126c0d978fe492a1f070331 255 SUPERFAMILY SSF52540 1 254 2.15E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6319 7ae430ed7126c0d978fe492a1f070331 255 Pfam PF13614 AAA domain 5 183 2.1E-37 T 12-10-2018 IPR025669 AAA domain PA257_6319 7ae430ed7126c0d978fe492a1f070331 255 Gene3D G3DSA:3.40.50.300 3 254 2.4E-59 T 12-10-2018 PA257_0974 ae27e42a67db6db51a2ddbca37c0a94f 130 Gene3D G3DSA:3.30.429.10 2 126 4.9E-48 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily PA257_0974 ae27e42a67db6db51a2ddbca37c0a94f 130 SUPERFAMILY SSF55331 2 125 2.43E-43 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily PA257_0974 ae27e42a67db6db51a2ddbca37c0a94f 130 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 122 1.9E-25 T 12-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 PA257_2214 a6fa885903c372c70336bc91ee7cc49d 326 Gene3D G3DSA:3.60.21.10 10 315 7.2E-41 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like PA257_2214 a6fa885903c372c70336bc91ee7cc49d 326 SUPERFAMILY SSF56300 8 305 1.17E-33 T 12-10-2018 PA257_2214 a6fa885903c372c70336bc91ee7cc49d 326 Pfam PF00149 Calcineurin-like phosphoesterase 11 149 6.1E-10 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PA257_0451 e667c065fcbf385370f4db841f3527ba 335 PIRSF PIRSF003097 37 331 6.2E-64 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 PA257_3413 c726372d37a93bcedc09de8f421ef076 256 Pfam PF02563 Polysaccharide biosynthesis/export protein 49 129 5.7E-14 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 PA257_3413 c726372d37a93bcedc09de8f421ef076 256 Gene3D G3DSA:3.10.560.10 115 221 1.4E-12 T 12-10-2018 PA257_5566 01606650b176834851c90094e563301a 532 Gene3D G3DSA:3.90.76.10 42 208 3.2E-157 T 12-10-2018 PA257_5566 01606650b176834851c90094e563301a 532 Gene3D G3DSA:3.10.105.10 290 507 3.2E-157 T 12-10-2018 PA257_5566 01606650b176834851c90094e563301a 532 SUPERFAMILY SSF53850 27 531 6.22E-147 T 12-10-2018 PA257_5566 01606650b176834851c90094e563301a 532 PIRSF PIRSF002741 13 529 1.2E-104 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PA257_5566 01606650b176834851c90094e563301a 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 449 1.5E-97 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain PA257_5566 01606650b176834851c90094e563301a 532 Gene3D G3DSA:3.40.190.10 209 520 3.2E-157 T 12-10-2018 PA257_5763 a98ab066d7ec97c2ba3b3991ebd4a7d0 270 Pfam PF10127 Predicted nucleotidyltransferase 13 260 1.1E-91 T 12-10-2018 IPR018775 Nucleotidyltransferase, predicted PA257_6143 b55bc1fc5a8b4f6937a02a73815e3730 172 Gene3D G3DSA:3.40.630.30 1 172 3.3E-56 T 12-10-2018 PA257_6143 b55bc1fc5a8b4f6937a02a73815e3730 172 SUPERFAMILY SSF55729 5 169 1.37E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6143 b55bc1fc5a8b4f6937a02a73815e3730 172 Pfam PF13420 Acetyltransferase (GNAT) domain 5 157 1.4E-22 T 12-10-2018 PA257_3813 0d0cfdb55c98b4357516a400b319f4fb 207 SUPERFAMILY SSF55729 30 202 1.42E-38 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_3813 0d0cfdb55c98b4357516a400b319f4fb 207 Pfam PF13302 Acetyltransferase (GNAT) domain 35 179 2.4E-17 T 12-10-2018 IPR000182 GNAT domain PA257_3813 0d0cfdb55c98b4357516a400b319f4fb 207 Gene3D G3DSA:3.40.630.30 30 206 8.4E-41 T 12-10-2018 PA257_5181 692f23fbce9f418116d4785f6112dfa4 245 Pfam PF13645 L,D-transpeptidase catalytic domain 44 210 1.1E-63 T 12-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase PA257_1002 7d3451b7d75bfd866e7e3c2d197b9e4d 521 Pfam PF06074 Protein of unknown function (DUF935) 4 511 3.8E-188 T 12-10-2018 IPR009279 Protein of unknown function DUF935 PA257_2665 551f22e353ab2643cece1fd5ff6c53d3 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 1.1E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_2665 551f22e353ab2643cece1fd5ff6c53d3 228 Pfam PF00072 Response regulator receiver domain 6 114 3.7E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2665 551f22e353ab2643cece1fd5ff6c53d3 228 Gene3D G3DSA:3.40.50.2300 1 123 9.4E-40 T 12-10-2018 PA257_2665 551f22e353ab2643cece1fd5ff6c53d3 228 SMART SM00862 148 223 2.4E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_2665 551f22e353ab2643cece1fd5ff6c53d3 228 SMART SM00448 3 114 8.3E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_2665 551f22e353ab2643cece1fd5ff6c53d3 228 Gene3D G3DSA:1.10.10.10 126 228 2.3E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_2665 551f22e353ab2643cece1fd5ff6c53d3 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 5 223 5.9E-103 T 12-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PA257_2665 551f22e353ab2643cece1fd5ff6c53d3 228 SUPERFAMILY SSF52172 2 177 6.34E-39 T 12-10-2018 IPR011006 CheY-like superfamily PA257_1174 c3e16461332868e5c06d72f0e985b33f 182 Pfam PF08238 Sel1 repeat 61 96 6.2E-9 T 12-10-2018 IPR006597 Sel1-like repeat PA257_1174 c3e16461332868e5c06d72f0e985b33f 182 Pfam PF08238 Sel1 repeat 97 128 5.8E-4 T 12-10-2018 IPR006597 Sel1-like repeat PA257_1174 c3e16461332868e5c06d72f0e985b33f 182 Gene3D G3DSA:1.25.40.10 28 161 1.1E-31 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1174 c3e16461332868e5c06d72f0e985b33f 182 SMART SM00671 61 96 3.5E-9 T 12-10-2018 IPR006597 Sel1-like repeat PA257_1174 c3e16461332868e5c06d72f0e985b33f 182 SMART SM00671 97 132 1.0E-6 T 12-10-2018 IPR006597 Sel1-like repeat PA257_1174 c3e16461332868e5c06d72f0e985b33f 182 SUPERFAMILY SSF81901 34 135 4.84E-22 T 12-10-2018 PA257_2430 3fdfa9bc9e087988d2e585802ff83331 171 Pfam PF05232 Chlorhexidine efflux transporter 93 156 9.9E-24 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter PA257_2430 3fdfa9bc9e087988d2e585802ff83331 171 Pfam PF05232 Chlorhexidine efflux transporter 25 88 9.3E-25 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter PA257_1397 263d2fe120b94c464f30774e8a53d624 380 SUPERFAMILY SSF52768 2 355 9.59E-105 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily PA257_1397 263d2fe120b94c464f30774e8a53d624 380 Pfam PF00850 Histone deacetylase domain 42 328 2.8E-77 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_1397 263d2fe120b94c464f30774e8a53d624 380 PRINTS PR01270 Histone deacetylase superfamily signature 140 163 8.9E-15 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_1397 263d2fe120b94c464f30774e8a53d624 380 PRINTS PR01270 Histone deacetylase superfamily signature 259 269 8.9E-15 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_1397 263d2fe120b94c464f30774e8a53d624 380 PRINTS PR01270 Histone deacetylase superfamily signature 174 189 8.9E-15 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_1397 263d2fe120b94c464f30774e8a53d624 380 Gene3D G3DSA:3.40.800.20 2 380 4.8E-157 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PA257_3118 2963d442c3f9d5256e6163a03c5ded48 326 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 302 324 0.0024 T 12-10-2018 IPR006530 YD repeat PA257_3118 2963d442c3f9d5256e6163a03c5ded48 326 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 240 264 8.1E-5 T 12-10-2018 IPR006530 YD repeat PA257_3118 2963d442c3f9d5256e6163a03c5ded48 326 Pfam PF05593 RHS Repeat 245 281 4.8E-8 T 12-10-2018 IPR031325 RHS repeat PA257_1295 0b2ce0ff58e7641a01c144e74dd74e14 272 SUPERFAMILY SSF109998 19 142 1.65E-5 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily PA257_1295 0b2ce0ff58e7641a01c144e74dd74e14 272 Pfam PF00639 PPIC-type PPIASE domain 122 214 8.4E-21 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 PA257_1295 0b2ce0ff58e7641a01c144e74dd74e14 272 SUPERFAMILY SSF54534 109 215 3.99E-22 T 12-10-2018 PA257_1295 0b2ce0ff58e7641a01c144e74dd74e14 272 Gene3D G3DSA:3.10.50.40 114 222 4.7E-21 T 12-10-2018 PA257_0636 569c3b21ff1ca0f8865d10423c4c29f5 325 SMART SM00797 24 312 2.1E-133 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PA257_0636 569c3b21ff1ca0f8865d10423c4c29f5 325 SUPERFAMILY SSF50891 180 304 1.52E-9 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_0636 569c3b21ff1ca0f8865d10423c4c29f5 325 Gene3D G3DSA:2.40.100.10 177 324 1.3E-40 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily PA257_0636 569c3b21ff1ca0f8865d10423c4c29f5 325 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 320 7.6E-77 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PA257_0636 569c3b21ff1ca0f8865d10423c4c29f5 325 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 298 4.0E-83 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PA257_5042 2f3c14b230b28bd86005961f925c94a3 501 Gene3D G3DSA:3.40.50.300 11 178 3.3E-12 T 12-10-2018 PA257_5042 2f3c14b230b28bd86005961f925c94a3 501 Pfam PF03354 Phage Terminase 6 476 3.0E-20 T 12-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type PA257_1309 8fd7315b6c3ff2573a36fc5d22c27aef 160 Pfam PF12680 SnoaL-like domain 9 110 1.0E-17 T 12-10-2018 IPR037401 SnoaL-like domain PA257_1309 8fd7315b6c3ff2573a36fc5d22c27aef 160 SUPERFAMILY SSF54427 2 133 2.6E-30 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_1309 8fd7315b6c3ff2573a36fc5d22c27aef 160 Gene3D G3DSA:3.10.450.50 5 129 3.0E-26 T 12-10-2018 PA257_3807 bea4b387df0204ab39141ab4a2286e42 126 Gene3D G3DSA:2.60.40.4110 21 126 1.1E-41 T 12-10-2018 PA257_3807 bea4b387df0204ab39141ab4a2286e42 126 Pfam PF14263 Domain of unknown function (DUF4354) 1 123 5.1E-48 T 12-10-2018 IPR025581 Protein of unknown function DUF4354 PA257_2952 7217a17509ca7dd46210612a8c323a8c 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 215 3.0E-44 T 12-10-2018 IPR006214 Bax inhibitor 1-related PA257_2952 7217a17509ca7dd46210612a8c323a8c 222 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 119 - T 12-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 PA257_0090 9bae234b3f3f0ff2bac471194a2ec32e 304 Pfam PF13488 Glycine zipper 71 116 6.7E-7 T 12-10-2018 IPR039567 Glycine zipper domain PA257_2787 cf60317fd949f0309639db274d5ea9c4 299 PIRSF PIRSF035875 7 296 9.1E-88 T 12-10-2018 IPR017039 Virulence factor BrkB PA257_2787 cf60317fd949f0309639db274d5ea9c4 299 Pfam PF03631 Virulence factor BrkB 24 276 3.1E-70 T 12-10-2018 IPR017039 Virulence factor BrkB PA257_2787 cf60317fd949f0309639db274d5ea9c4 299 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 16 275 5.4E-44 T 12-10-2018 IPR017039 Virulence factor BrkB PA257_6393 6aa80585a4eba45ea27f934b34541d30 312 Pfam PF00487 Fatty acid desaturase 49 282 5.0E-33 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PA257_5449 9d2948cb61d1ff78f66b0cade758a56d 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.042 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PA257_5449 9d2948cb61d1ff78f66b0cade758a56d 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 4.1E-24 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PA257_5449 9d2948cb61d1ff78f66b0cade758a56d 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 119 2.1E-32 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PA257_2486 f45753eeaf9579ff8e31b56acf617b56 375 Gene3D G3DSA:2.60.40.3120 1 113 9.3E-49 T 12-10-2018 PA257_2486 f45753eeaf9579ff8e31b56acf617b56 375 SUPERFAMILY SSF53187 107 373 4.81E-52 T 12-10-2018 PA257_2486 f45753eeaf9579ff8e31b56acf617b56 375 Pfam PF00246 Zinc carboxypeptidase 134 340 4.1E-18 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PA257_2486 f45753eeaf9579ff8e31b56acf617b56 375 Gene3D G3DSA:3.40.630.10 114 375 1.7E-68 T 12-10-2018 PA257_4382 6dddf44baf3155974a9a5c18a2fa4606 397 Gene3D G3DSA:1.20.1250.20 9 204 1.2E-9 T 12-10-2018 PA257_4382 6dddf44baf3155974a9a5c18a2fa4606 397 SUPERFAMILY SSF103473 9 379 3.53E-22 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_4382 6dddf44baf3155974a9a5c18a2fa4606 397 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 20 379 1.3E-126 T 12-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB PA257_4382 6dddf44baf3155974a9a5c18a2fa4606 397 Gene3D G3DSA:1.20.1250.20 206 386 1.5E-6 T 12-10-2018 PA257_6598 5f797f6bec9ce3208ddc48b846ea1901 196 Pfam PF09335 SNARE associated Golgi protein 23 139 3.6E-18 T 12-10-2018 IPR032816 SNARE associated Golgi protein PA257_3035 bde0f0e124bb4b1a1beb64f53d5c4e89 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.9E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PA257_3035 bde0f0e124bb4b1a1beb64f53d5c4e89 303 Gene3D G3DSA:1.10.10.10 3 86 3.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_3035 bde0f0e124bb4b1a1beb64f53d5c4e89 303 Gene3D G3DSA:3.40.190.290 92 294 1.9E-65 T 12-10-2018 PA257_3035 bde0f0e124bb4b1a1beb64f53d5c4e89 303 SUPERFAMILY SSF53850 89 297 1.03E-46 T 12-10-2018 PA257_3035 bde0f0e124bb4b1a1beb64f53d5c4e89 303 Pfam PF03466 LysR substrate binding domain 89 293 1.1E-44 T 12-10-2018 IPR005119 LysR, substrate-binding PA257_3035 bde0f0e124bb4b1a1beb64f53d5c4e89 303 SUPERFAMILY SSF46785 4 83 1.54E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_1059 8a62a384d0ad85adf510a28b64a008f4 461 Gene3D G3DSA:3.40.640.10 93 351 8.5E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PA257_1059 8a62a384d0ad85adf510a28b64a008f4 461 Gene3D G3DSA:3.90.1150.10 27 440 8.5E-115 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PA257_1059 8a62a384d0ad85adf510a28b64a008f4 461 Pfam PF00202 Aminotransferase class-III 53 435 4.0E-41 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PA257_1059 8a62a384d0ad85adf510a28b64a008f4 461 SUPERFAMILY SSF53383 45 456 5.28E-78 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PA257_2086 663e795c6b979d60e3e3f622ed618ccb 484 Pfam PF02386 Cation transport protein 41 476 2.4E-56 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PA257_2086 663e795c6b979d60e3e3f622ed618ccb 484 PIRSF PIRSF006247 1 484 3.2E-169 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 PA257_5082 e0f9099b00ebdae8f92522fc79c8ca9d 172 Pfam PF05488 PAAR motif 2 54 1.7E-16 T 12-10-2018 IPR008727 PAAR motif PA257_5082 e0f9099b00ebdae8f92522fc79c8ca9d 172 Gene3D G3DSA:2.60.200.60 54 90 8.9E-6 T 12-10-2018 PA257_5082 e0f9099b00ebdae8f92522fc79c8ca9d 172 Gene3D G3DSA:2.60.200.60 1 53 2.2E-13 T 12-10-2018 PA257_1107 4d8ccfaff917f0028da0b9b70fcc8e4e 295 Gene3D G3DSA:1.10.600.10 1 295 5.0E-123 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily PA257_1107 4d8ccfaff917f0028da0b9b70fcc8e4e 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site PA257_1107 4d8ccfaff917f0028da0b9b70fcc8e4e 295 Pfam PF00348 Polyprenyl synthetase 29 259 2.3E-58 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 PA257_1107 4d8ccfaff917f0028da0b9b70fcc8e4e 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site PA257_1107 4d8ccfaff917f0028da0b9b70fcc8e4e 295 SUPERFAMILY SSF48576 5 287 6.24E-87 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily PA257_5255 b2cc8fee14a2f8868286613578ba4cae 289 SUPERFAMILY SSF141868 13 258 3.66E-85 T 12-10-2018 IPR035919 EAL domain superfamily PA257_5255 b2cc8fee14a2f8868286613578ba4cae 289 SMART SM00052 6 250 1.0E-126 T 12-10-2018 IPR001633 EAL domain PA257_5255 b2cc8fee14a2f8868286613578ba4cae 289 Pfam PF00563 EAL domain 13 245 6.4E-71 T 12-10-2018 IPR001633 EAL domain PA257_5255 b2cc8fee14a2f8868286613578ba4cae 289 Gene3D G3DSA:3.20.20.450 10 257 2.1E-94 T 12-10-2018 IPR035919 EAL domain superfamily PA257_6518 1e65914c30b94322be4e074e5c44ae77 331 PIRSF PIRSF006470 1 330 3.3E-133 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 PA257_6518 1e65914c30b94322be4e074e5c44ae77 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 272 3.4E-82 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 PA257_6518 1e65914c30b94322be4e074e5c44ae77 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 313 1.1E-113 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PA257_6518 1e65914c30b94322be4e074e5c44ae77 331 Gene3D G3DSA:3.40.190.170 26 327 6.4E-100 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PA257_1953 fd5d600b68d1aab3617453feeff46334 291 Pfam PF00557 Metallopeptidase family M24 15 262 7.9E-25 T 12-10-2018 IPR000994 Peptidase M24 PA257_1953 fd5d600b68d1aab3617453feeff46334 291 SUPERFAMILY SSF55920 7 268 4.84E-22 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like PA257_1953 fd5d600b68d1aab3617453feeff46334 291 Gene3D G3DSA:3.90.230.10 9 281 1.1E-20 T 12-10-2018 PA257_6317 3ece613d43d96b06272b3328ef71eee8 150 SUPERFAMILY SSF54637 11 145 2.35E-26 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_6317 3ece613d43d96b06272b3328ef71eee8 150 Pfam PF14539 Domain of unknown function (DUF4442) 13 137 1.0E-19 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 PA257_6317 3ece613d43d96b06272b3328ef71eee8 150 Gene3D G3DSA:3.10.129.10 1 150 2.7E-46 T 12-10-2018 PA257_0258 619d9bfef0cb931694d238a1a063363e 263 Pfam PF00561 alpha/beta hydrolase fold 22 246 2.1E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0258 619d9bfef0cb931694d238a1a063363e 263 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 260 5.2E-98 T 12-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 PA257_0258 619d9bfef0cb931694d238a1a063363e 263 Gene3D G3DSA:3.40.50.1820 2 261 5.4E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0258 619d9bfef0cb931694d238a1a063363e 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 207 221 2.2E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0258 619d9bfef0cb931694d238a1a063363e 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.2E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0258 619d9bfef0cb931694d238a1a063363e 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.2E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0258 619d9bfef0cb931694d238a1a063363e 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.2E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_0258 619d9bfef0cb931694d238a1a063363e 263 SUPERFAMILY SSF53474 2 260 6.15E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1218 8b2fc0f928b38f205fe4d54ba331977f 337 SMART SM00062 27 250 2.8E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PA257_1218 8b2fc0f928b38f205fe4d54ba331977f 337 Gene3D G3DSA:3.40.190.10 28 237 1.4E-53 T 12-10-2018 PA257_1218 8b2fc0f928b38f205fe4d54ba331977f 337 Gene3D G3DSA:1.10.8.450 238 276 1.4E-53 T 12-10-2018 PA257_1218 8b2fc0f928b38f205fe4d54ba331977f 337 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 28 326 8.2E-132 T 12-10-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 PA257_1218 8b2fc0f928b38f205fe4d54ba331977f 337 SUPERFAMILY SSF53850 28 247 5.67E-46 T 12-10-2018 PA257_1218 8b2fc0f928b38f205fe4d54ba331977f 337 Gene3D G3DSA:3.40.190.10 105 202 1.4E-53 T 12-10-2018 PA257_1218 8b2fc0f928b38f205fe4d54ba331977f 337 Pfam PF09084 NMT1/THI5 like 62 243 1.8E-20 T 12-10-2018 IPR015168 SsuA/THI5-like PA257_5178 15bee1cf73c35a4d918917a242231689 70 Pfam PF14375 Cysteine-rich CWC 10 62 7.6E-14 T 12-10-2018 IPR032720 Cysteine-rich CWC PA257_1799 fe7302cb7a818e1f5d3d617edb389d34 152 SUPERFAMILY SSF55811 9 132 9.21E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PA257_1799 fe7302cb7a818e1f5d3d617edb389d34 152 Pfam PF00293 NUDIX domain 10 119 1.7E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PA257_1799 fe7302cb7a818e1f5d3d617edb389d34 152 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PA257_1799 fe7302cb7a818e1f5d3d617edb389d34 152 Gene3D G3DSA:3.90.79.10 2 148 2.9E-19 T 12-10-2018 PA257_1794 6f406665b324d8c41983b2acb767056a 286 Pfam PF00892 EamA-like transporter family 139 277 2.8E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_1794 6f406665b324d8c41983b2acb767056a 286 Pfam PF00892 EamA-like transporter family 3 128 1.1E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PA257_1794 6f406665b324d8c41983b2acb767056a 286 SUPERFAMILY SSF103481 35 131 3.53E-9 T 12-10-2018 PA257_1794 6f406665b324d8c41983b2acb767056a 286 SUPERFAMILY SSF103481 176 282 1.7E-9 T 12-10-2018 PA257_1794 6f406665b324d8c41983b2acb767056a 286 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 5.5E-90 T 12-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 PA257_1417 4a44a9de5883c9763357637a11e9d674 256 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 127 249 1.2E-31 T 12-10-2018 IPR018754 Protein of unknown function DUF2285 PA257_3424 01125bfe99da5615466dfd27c1e7d93f 257 Gene3D G3DSA:1.10.530.40 72 256 2.9E-22 T 12-10-2018 PA257_3424 01125bfe99da5615466dfd27c1e7d93f 257 Pfam PF16754 Bacterial toxin homologue of phage lysozyme, C-term 69 217 4.5E-18 T 12-10-2018 IPR031922 Bacterial toxin homologue of phage lysozyme, C-terminal PA257_3424 01125bfe99da5615466dfd27c1e7d93f 257 SUPERFAMILY SSF53955 72 254 1.95E-18 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_5413 3c6024e92bd36c7e4d4525ac5c6f6c5e 298 Gene3D G3DSA:2.40.110.10 83 171 6.3E-8 T 12-10-2018 PA257_5413 3c6024e92bd36c7e4d4525ac5c6f6c5e 298 SUPERFAMILY SSF56645 50 165 1.57E-11 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_6720 0c066e2e70e9547a7a28a2c737101a64 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.7E-34 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 PA257_6720 0c066e2e70e9547a7a28a2c737101a64 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.7E-40 T 12-10-2018 IPR013527 YicC-like, N-terminal PA257_6720 0c066e2e70e9547a7a28a2c737101a64 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.8E-90 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 PA257_1084 7866e7f7fe273a92e28010ca36e7a1a1 172 Gene3D G3DSA:2.40.50.870 23 172 1.3E-60 T 12-10-2018 PA257_1084 7866e7f7fe273a92e28010ca36e7a1a1 172 Pfam PF11736 Protein of unknown function (DUF3299) 30 165 3.3E-46 T 12-10-2018 IPR021727 Protein of unknown function DUF3299 PA257_1854 f36587eeebe96079961e39d5d588e03a 365 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 10 350 5.4E-141 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PA257_1854 f36587eeebe96079961e39d5d588e03a 365 Pfam PF00676 Dehydrogenase E1 component 38 320 3.3E-80 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 PA257_1854 f36587eeebe96079961e39d5d588e03a 365 SUPERFAMILY SSF52518 30 352 3.34E-96 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold PA257_1854 f36587eeebe96079961e39d5d588e03a 365 Gene3D G3DSA:3.40.50.970 2 357 9.2E-108 T 12-10-2018 PA257_0970 ba5da04e561b039d4c8813459d4ca84b 162 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 159 1.1E-38 T 12-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 PA257_0970 ba5da04e561b039d4c8813459d4ca84b 162 PIRSF PIRSF030820 1 162 5.5E-62 T 12-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 PA257_4349 6a3863419ff7d96e882de88b4e0339cb 157 Gene3D G3DSA:2.30.330.10 67 157 2.4E-34 T 12-10-2018 IPR036429 SpoA-like superfamily PA257_4349 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 110 123 2.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PA257_4349 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 93 2.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PA257_4349 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 94 110 2.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PA257_4349 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 123 138 2.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PA257_4349 6a3863419ff7d96e882de88b4e0339cb 157 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 74 149 3.3E-33 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 PA257_4349 6a3863419ff7d96e882de88b4e0339cb 157 SUPERFAMILY SSF101801 74 155 1.2E-25 T 12-10-2018 IPR036429 SpoA-like superfamily PA257_4349 6a3863419ff7d96e882de88b4e0339cb 157 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 78 147 6.6E-25 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) PA257_5168 45c07028364557af0cc253a27c91904d 214 Gene3D G3DSA:1.10.287.70 103 209 1.1E-14 T 12-10-2018 PA257_5168 45c07028364557af0cc253a27c91904d 214 Pfam PF07885 Ion channel 126 207 3.0E-12 T 12-10-2018 IPR013099 Potassium channel domain PA257_5168 45c07028364557af0cc253a27c91904d 214 SUPERFAMILY SSF81324 117 209 2.88E-16 T 12-10-2018 PA257_1217 41891bc226ef9f39fedf609418969e4f 290 Gene3D G3DSA:1.10.540.10 3 82 9.0E-11 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PA257_1217 41891bc226ef9f39fedf609418969e4f 290 SUPERFAMILY SSF56645 4 179 1.41E-12 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PA257_4130 c6b3e5ca1b095b28527ca39c8c9e9867 297 Gene3D G3DSA:1.20.1530.20 3 289 6.8E-76 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily PA257_4130 c6b3e5ca1b095b28527ca39c8c9e9867 297 Pfam PF01758 Sodium Bile acid symporter family 12 194 5.4E-33 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PA257_5117 87d56d4976b540f4812c5fa0c8a0c921 471 ProSitePatterns PS00218 Amino acid permeases signature. 47 77 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PA257_5117 87d56d4976b540f4812c5fa0c8a0c921 471 PIRSF PIRSF006060 1 462 1.2E-74 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_5117 87d56d4976b540f4812c5fa0c8a0c921 471 Pfam PF00324 Amino acid permease 22 450 9.5E-118 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_5117 87d56d4976b540f4812c5fa0c8a0c921 471 Gene3D G3DSA:1.20.1740.10 13 461 2.6E-67 T 12-10-2018 PA257_5492 e0faa9e547b3acea6f5fb48ca75ece89 197 Gene3D G3DSA:3.40.50.10490 1 197 4.9E-76 T 12-10-2018 PA257_5492 e0faa9e547b3acea6f5fb48ca75ece89 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 37.873 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 PA257_5492 e0faa9e547b3acea6f5fb48ca75ece89 197 SUPERFAMILY SSF53697 2 193 3.03E-58 T 12-10-2018 PA257_5492 e0faa9e547b3acea6f5fb48ca75ece89 197 Pfam PF13580 SIS domain 14 146 1.0E-35 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PA257_0104 a0c8fc5bd00646490e62458c1fb6d04d 172 PIRSF PIRSF028301 3 172 9.4E-59 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PA257_0104 a0c8fc5bd00646490e62458c1fb6d04d 172 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 163 4.4E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PA257_0104 a0c8fc5bd00646490e62458c1fb6d04d 172 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 4.5E-58 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PA257_5468 564362d3dfe65e4556fe467bb034416f 405 Gene3D G3DSA:3.10.20.340 276 405 1.7E-40 T 12-10-2018 PA257_5468 564362d3dfe65e4556fe467bb034416f 405 SUPERFAMILY SSF56266 14 402 2.49E-131 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PA257_5468 564362d3dfe65e4556fe467bb034416f 405 Gene3D G3DSA:3.60.70.12 9 275 2.4E-86 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PA257_5468 564362d3dfe65e4556fe467bb034416f 405 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 405 153.127 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PA257_5468 564362d3dfe65e4556fe467bb034416f 405 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 405 0.0 T 12-10-2018 PA257_5468 564362d3dfe65e4556fe467bb034416f 405 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 14 405 5.9E-114 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PA257_5468 564362d3dfe65e4556fe467bb034416f 405 Pfam PF01960 ArgJ family 21 405 2.3E-136 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PA257_1961 1322e7c05eccdb28b9d4e4938b8233a9 277 SUPERFAMILY SSF161098 70 268 1.44E-24 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1961 1322e7c05eccdb28b9d4e4938b8233a9 277 Gene3D G3DSA:1.10.3720.10 64 276 1.6E-27 T 12-10-2018 IPR035906 MetI-like superfamily PA257_1961 1322e7c05eccdb28b9d4e4938b8233a9 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 274 4.2E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3771 881604a873e0d15e7d297c48dbb1fffc 437 Pfam PF05525 Branched-chain amino acid transport protein 7 427 6.6E-157 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PA257_3771 881604a873e0d15e7d297c48dbb1fffc 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 4.0E-164 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PA257_6404 9a3f76d02ba8b6b717387494ca96e7e6 464 Pfam PF13163 Protein of unknown function (DUF3999) 31 456 2.4E-149 T 12-10-2018 IPR025060 Protein of unknown function DUF3999 PA257_1530 43a8a3ac84058f13a7a4cc6967c62a42 134 Gene3D G3DSA:1.20.1270.390 35 131 5.6E-32 T 12-10-2018 PA257_1530 43a8a3ac84058f13a7a4cc6967c62a42 134 Pfam PF14346 Domain of unknown function (DUF4398) 28 125 3.5E-30 T 12-10-2018 IPR025511 Domain of unknown function DUF4398 PA257_5843 cde9f55d625e1161f70f5278951e45bc 327 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 68 2.1E-15 T 12-10-2018 PA257_5843 cde9f55d625e1161f70f5278951e45bc 327 Gene3D G3DSA:3.90.660.10 43 286 1.1E-122 T 12-10-2018 PA257_5843 cde9f55d625e1161f70f5278951e45bc 327 Hamap MF_02074 Renalase. 1 327 59.253 T 12-10-2018 IPR034721 Bacterial renalase GO:0000166|GO:0016491 PA257_5843 cde9f55d625e1161f70f5278951e45bc 327 SUPERFAMILY SSF51905 2 327 8.06E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5843 cde9f55d625e1161f70f5278951e45bc 327 Gene3D G3DSA:3.50.50.60 5 321 1.1E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_5843 cde9f55d625e1161f70f5278951e45bc 327 Pfam PF01593 Flavin containing amine oxidoreductase 109 324 1.8E-10 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 PA257_2382 5477dce31426a6b060ddb5d7e1ad19ff 443 SUPERFAMILY SSF53474 3 192 1.5E-18 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2382 5477dce31426a6b060ddb5d7e1ad19ff 443 Gene3D G3DSA:3.40.50.1820 5 175 6.6E-13 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3633 10eea89718a6c80e0343a61bbfd4c4e7 309 Pfam PF07859 alpha/beta hydrolase fold 76 276 4.4E-59 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 PA257_3633 10eea89718a6c80e0343a61bbfd4c4e7 309 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 144 156 - T 12-10-2018 IPR033140 Lipase, GDXG, putative serine active site PA257_3633 10eea89718a6c80e0343a61bbfd4c4e7 309 SUPERFAMILY SSF53474 48 296 4.41E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3633 10eea89718a6c80e0343a61bbfd4c4e7 309 Gene3D G3DSA:3.40.50.1820 31 302 6.5E-80 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3633 10eea89718a6c80e0343a61bbfd4c4e7 309 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 76 92 - T 12-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 PA257_3917 a1641407c7ef435de3302e2e9f42f368 75 Pfam PF11174 Protein of unknown function (DUF2970) 15 70 3.3E-25 T 12-10-2018 IPR021344 Protein of unknown function DUF2970 PA257_4528 df105a24dfd498d84bb7293ec8b9b7e0 679 Pfam PF04632 Fusaric acid resistance protein family 23 660 1.8E-186 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 PA257_1628 fb38045f799ddf8112a387692971b2ff 345 Pfam PF03864 Phage major capsid protein E 5 343 6.2E-80 T 12-10-2018 IPR005564 Major capsid protein GpE PA257_1628 fb38045f799ddf8112a387692971b2ff 345 Gene3D G3DSA:3.30.1930.10 157 284 2.0E-96 T 12-10-2018 PA257_1628 fb38045f799ddf8112a387692971b2ff 345 Gene3D G3DSA:3.15.30.10 33 330 2.0E-96 T 12-10-2018 PA257_5331 da6a19a6457e0a139d7e60b73d6f4395 198 SUPERFAMILY SSF48613 14 196 2.57E-54 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_5331 da6a19a6457e0a139d7e60b73d6f4395 198 Gene3D G3DSA:1.20.910.10 1 198 8.4E-51 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_5331 da6a19a6457e0a139d7e60b73d6f4395 198 Pfam PF01126 Heme oxygenase 15 194 1.3E-34 T 12-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 PA257_5711 791443141996827e838d9a01f847ffc2 116 Gene3D G3DSA:3.30.2310.20 1 113 5.5E-23 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PA257_5711 791443141996827e838d9a01f847ffc2 116 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 108 7.2E-18 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PA257_5542 028edf4ce2648cdaa417cc4fc4e9e384 480 Pfam PF01523 Putative modulator of DNA gyrase 38 330 1.3E-69 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PA257_5542 028edf4ce2648cdaa417cc4fc4e9e384 480 SUPERFAMILY SSF111283 26 478 7.98E-132 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 PA257_5542 028edf4ce2648cdaa417cc4fc4e9e384 480 Gene3D G3DSA:3.30.2290.10 21 238 1.4E-19 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal PA257_5542 028edf4ce2648cdaa417cc4fc4e9e384 480 PIRSF PIRSF004919 20 479 1.7E-140 T 12-10-2018 IPR025502 TldD PA257_2108 71c02ee7fa5fe8331e7af1cff528a6ea 420 Gene3D G3DSA:3.40.190.10 28 375 2.3E-165 T 12-10-2018 PA257_2108 71c02ee7fa5fe8331e7af1cff528a6ea 420 SUPERFAMILY SSF53850 24 418 3.62E-64 T 12-10-2018 PA257_2108 71c02ee7fa5fe8331e7af1cff528a6ea 420 Gene3D G3DSA:3.40.190.10 143 400 2.3E-165 T 12-10-2018 PA257_2108 71c02ee7fa5fe8331e7af1cff528a6ea 420 Pfam PF01547 Bacterial extracellular solute-binding protein 43 322 1.9E-26 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein PA257_4809 498cf7b4804763a27cffaa872c9cd308 128 SUPERFAMILY SSF50249 14 114 2.91E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold PA257_4809 498cf7b4804763a27cffaa872c9cd308 128 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 20 53 7.0E-6 T 12-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal PA257_4809 498cf7b4804763a27cffaa872c9cd308 128 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 54 109 7.3E-12 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal PA257_0354 d80df7f8bafa10b1925e138ebc95c73f 318 Pfam PF00491 Arginase family 36 307 8.2E-87 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 PA257_0354 d80df7f8bafa10b1925e138ebc95c73f 318 PIRSF PIRSF036979 14 314 3.9E-92 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 PA257_0354 d80df7f8bafa10b1925e138ebc95c73f 318 TIGRFAM TIGR01230 agmatinase: agmatinase 39 308 1.3E-54 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 PA257_0354 d80df7f8bafa10b1925e138ebc95c73f 318 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 PA257_0354 d80df7f8bafa10b1925e138ebc95c73f 318 SUPERFAMILY SSF52768 15 311 2.88E-95 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily PA257_0354 d80df7f8bafa10b1925e138ebc95c73f 318 Gene3D G3DSA:3.40.800.10 1 318 3.8E-133 T 12-10-2018 PA257_0354 d80df7f8bafa10b1925e138ebc95c73f 318 PRINTS PR00116 Arginase signature 122 137 5.9E-11 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 PA257_0354 d80df7f8bafa10b1925e138ebc95c73f 318 PRINTS PR00116 Arginase signature 235 264 5.9E-11 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 PA257_2555 88b707f288c8d686829c67fdb33dca9f 83 Pfam PF01609 Transposase DDE domain 9 71 7.1E-9 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PA257_2022 a2d8731874e3ffd4285f0dcc50ac1ecf 306 Pfam PF04381 Putative exonuclease, RdgC 1 300 2.1E-115 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 PA257_2022 a2d8731874e3ffd4285f0dcc50ac1ecf 306 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 302 44.932 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 PA257_0697 4c346e45de1b5465b3dc2d2a3d1eea84 113 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 36 104 1.4E-12 T 12-10-2018 IPR018660 C-type lysozyme inhibitor PA257_0697 4c346e45de1b5465b3dc2d2a3d1eea84 113 SUPERFAMILY SSF141488 32 111 1.44E-15 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily PA257_0697 4c346e45de1b5465b3dc2d2a3d1eea84 113 Gene3D G3DSA:2.40.128.200 31 113 9.9E-8 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily PA257_6487 bb2d1967f3a4d9e3e4811a909534271b 424 SUPERFAMILY SSF69279 29 200 2.1E-19 T 12-10-2018 PA257_6487 bb2d1967f3a4d9e3e4811a909534271b 424 Pfam PF05954 Phage late control gene D protein (GPD) 63 320 1.7E-13 T 12-10-2018 PA257_5800 133f21042eb5f45957aa6ad759815fc8 191 Pfam PF12804 MobA-like NTP transferase domain 9 167 2.6E-37 T 12-10-2018 IPR025877 MobA-like NTP transferase PA257_5800 133f21042eb5f45957aa6ad759815fc8 191 Gene3D G3DSA:3.90.550.10 4 191 8.3E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_5800 133f21042eb5f45957aa6ad759815fc8 191 SUPERFAMILY SSF53448 8 190 3.99E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_3896 c356d73bd433291b0be70af56611e0ba 307 PIRSF PIRSF016660 1 305 2.3E-123 T 12-10-2018 IPR008526 Inner membrane protein YedI PA257_3896 c356d73bd433291b0be70af56611e0ba 307 Pfam PF05661 Protein of unknown function (DUF808) 4 291 3.9E-118 T 12-10-2018 IPR008526 Inner membrane protein YedI PA257_5989 fa9ee274865c78883ef5cb427909e7ba 560 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 552 2.0E-221 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PA257_5989 fa9ee274865c78883ef5cb427909e7ba 560 Pfam PF02652 L-lactate permease 16 548 1.0E-203 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PA257_0905 bfe5bea9eb45ff833b91795753468c56 402 Gene3D G3DSA:3.50.50.60 1 357 3.3E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0905 bfe5bea9eb45ff833b91795753468c56 402 SUPERFAMILY SSF51905 1 364 1.04E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_0905 bfe5bea9eb45ff833b91795753468c56 402 Pfam PF01266 FAD dependent oxidoreductase 1 356 1.5E-36 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_0905 bfe5bea9eb45ff833b91795753468c56 402 Gene3D G3DSA:3.30.9.10 93 318 3.3E-48 T 12-10-2018 PA257_6928 d8964095ae6b02053a7f96847fc5df8d 70 Pfam PF06004 Bacterial protein of unknown function (DUF903) 22 68 4.9E-16 T 12-10-2018 IPR010305 Protein of unknown function DUF903 PA257_6928 d8964095ae6b02053a7f96847fc5df8d 70 SUPERFAMILY SSF50182 19 69 6.0E-12 T 12-10-2018 IPR010920 LSM domain superfamily PA257_6928 d8964095ae6b02053a7f96847fc5df8d 70 Gene3D G3DSA:2.30.30.100 18 70 1.4E-14 T 12-10-2018 PA257_1000 0934b04f05e17cb6601175ad2a7f7645 158 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 2 86 1.1E-11 T 12-10-2018 IPR006522 Phage virion morphogensis protein PA257_1000 0934b04f05e17cb6601175ad2a7f7645 158 Pfam PF05069 Phage virion morphogenesis family 1 150 3.3E-30 T 12-10-2018 IPR006522 Phage virion morphogensis protein PA257_5272 f519ceebd4874a63f53c79f6d9d9c4e4 343 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 125 248 5.4E-28 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PA257_5272 f519ceebd4874a63f53c79f6d9d9c4e4 343 SMART SM00382 121 253 1.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5272 f519ceebd4874a63f53c79f6d9d9c4e4 343 Gene3D G3DSA:3.40.50.300 76 269 1.7E-43 T 12-10-2018 PA257_5272 f519ceebd4874a63f53c79f6d9d9c4e4 343 SUPERFAMILY SSF52540 79 320 1.83E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_5803 ec313e96fc64c9fecab6baf67d8d30c7 179 SUPERFAMILY SSF54292 4 87 2.1E-17 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_5803 ec313e96fc64c9fecab6baf67d8d30c7 179 SUPERFAMILY SSF47741 99 174 2.22E-19 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily PA257_5803 ec313e96fc64c9fecab6baf67d8d30c7 179 Pfam PF01799 [2Fe-2S] binding domain 82 166 9.8E-21 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PA257_5803 ec313e96fc64c9fecab6baf67d8d30c7 179 Gene3D G3DSA:3.30.365.10 1 178 5.4E-44 T 12-10-2018 PA257_5803 ec313e96fc64c9fecab6baf67d8d30c7 179 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 39 80 1.9E-5 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain PA257_3531 328fd05b19eee8eb6cd2ef118e9601c3 114 SUPERFAMILY SSF54909 1 95 1.93E-29 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_3531 328fd05b19eee8eb6cd2ef118e9601c3 114 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 78 4.2E-20 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PA257_3531 328fd05b19eee8eb6cd2ef118e9601c3 114 Gene3D G3DSA:3.30.70.100 1 100 1.9E-29 T 12-10-2018 PA257_2082 ae0b7a76d19a0fb442a514559650b4d3 210 SUPERFAMILY SSF159594 32 201 4.45E-44 T 12-10-2018 PA257_2082 ae0b7a76d19a0fb442a514559650b4d3 210 Gene3D G3DSA:3.40.50.10610 23 210 1.1E-58 T 12-10-2018 PA257_2082 ae0b7a76d19a0fb442a514559650b4d3 210 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 34 194 6.3E-26 T 12-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component PA257_0284 b5717af27b81f430381d13f87aa2b45c 206 Pfam PF06912 Protein of unknown function (DUF1275) 4 190 1.3E-32 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 PA257_0507 df5323b2508d49bafc038dab4303fd2f 166 Pfam PF08822 Protein of unknown function (DUF1804) 1 163 1.2E-64 T 12-10-2018 IPR014926 Bacteriophage D3112, Orf24 PA257_3152 df5323b2508d49bafc038dab4303fd2f 166 Pfam PF08822 Protein of unknown function (DUF1804) 1 163 1.2E-64 T 12-10-2018 IPR014926 Bacteriophage D3112, Orf24 PA257_1381 658d7ed9d9fd30a72d1ccc10212715d5 471 Pfam PF03929 PepSY-associated TM region 16 410 6.1E-72 T 12-10-2018 IPR005625 PepSY-associated TM protein PA257_1381 658d7ed9d9fd30a72d1ccc10212715d5 471 Pfam PF03413 Peptidase propeptide and YPEB domain 299 355 7.0E-4 T 12-10-2018 IPR025711 PepSY domain PA257_1031 7c08bb86fa2d45c7507dee0c12bf8525 122 Gene3D G3DSA:1.10.10.60 64 115 3.3E-14 T 12-10-2018 PA257_1031 7c08bb86fa2d45c7507dee0c12bf8525 122 Pfam PF08765 Mor transcription activator family 11 115 1.8E-31 T 12-10-2018 IPR014875 Mor transcription activator PA257_1031 7c08bb86fa2d45c7507dee0c12bf8525 122 SUPERFAMILY SSF46689 20 105 7.53E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_0543 cc243581fe7fcac6c3b1e574010a0de6 135 Gene3D G3DSA:3.40.50.12740 7 133 3.6E-37 T 12-10-2018 PA257_0543 cc243581fe7fcac6c3b1e574010a0de6 135 Pfam PF00072 Response regulator receiver domain 10 121 3.2E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0543 cc243581fe7fcac6c3b1e574010a0de6 135 SMART SM00448 8 121 6.9E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_0543 cc243581fe7fcac6c3b1e574010a0de6 135 SUPERFAMILY SSF52172 5 126 1.85E-35 T 12-10-2018 IPR011006 CheY-like superfamily PA257_3101 592d889bbf64accfde8fd123e8fbea22 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 211 3.7E-86 T 12-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 PA257_3101 592d889bbf64accfde8fd123e8fbea22 214 Gene3D G3DSA:1.20.1050.10 88 212 2.0E-41 T 12-10-2018 PA257_3101 592d889bbf64accfde8fd123e8fbea22 214 SUPERFAMILY SSF52833 1 90 1.17E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_3101 592d889bbf64accfde8fd123e8fbea22 214 SUPERFAMILY SSF47616 81 211 2.98E-26 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PA257_3101 592d889bbf64accfde8fd123e8fbea22 214 Gene3D G3DSA:3.40.30.10 1 87 2.5E-23 T 12-10-2018 PA257_3101 592d889bbf64accfde8fd123e8fbea22 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 2.1E-13 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_5418 1a141869bf5d5eacedc988bfd9c9645a 100 SMART SM00418 7 98 9.8E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PA257_5418 1a141869bf5d5eacedc988bfd9c9645a 100 SUPERFAMILY SSF46785 3 97 1.15E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_5418 1a141869bf5d5eacedc988bfd9c9645a 100 Gene3D G3DSA:1.10.10.10 3 99 2.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5418 1a141869bf5d5eacedc988bfd9c9645a 100 Pfam PF12840 Helix-turn-helix domain 6 78 1.3E-17 T 12-10-2018 PA257_2095 5c56ffaa6b88100368b405a0d30e7659 195 Pfam PF04279 Intracellular septation protein A 1 185 1.8E-60 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 PA257_2095 5c56ffaa6b88100368b405a0d30e7659 195 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 187 17.597 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 PA257_2095 5c56ffaa6b88100368b405a0d30e7659 195 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 186 2.2E-52 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 PA257_0655 02423319e9c42261a2faa503be21927e 174 Gene3D G3DSA:3.30.70.3460 32 173 7.0E-37 T 12-10-2018 PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 SUPERFAMILY SSF81901 15 251 7.19E-43 T 12-10-2018 PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 SMART SM00671 148 183 1.5E-7 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 SMART SM00671 40 75 1.0E-6 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 SMART SM00671 114 147 9.3E-7 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 SMART SM00671 76 111 6.6E-5 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 Pfam PF08238 Sel1 repeat 236 250 0.72 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 Pfam PF08238 Sel1 repeat 77 110 0.051 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 Pfam PF08238 Sel1 repeat 41 75 5.1E-6 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 Pfam PF08238 Sel1 repeat 114 147 6.3E-8 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 Pfam PF08238 Sel1 repeat 148 183 5.5E-6 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 Pfam PF08238 Sel1 repeat 202 215 120.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5587 549684ad638736dca42aa46ef1b4c6d2 271 Gene3D G3DSA:1.25.40.10 18 268 8.6E-52 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_0601 ed73d0b533e0176c99c5b09d49d10b51 169 Gene3D G3DSA:2.40.70.10 20 156 6.9E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_0601 ed73d0b533e0176c99c5b09d49d10b51 169 SUPERFAMILY SSF50630 22 163 4.12E-40 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily PA257_0601 ed73d0b533e0176c99c5b09d49d10b51 169 Pfam PF05618 Putative ATP-dependant zinc protease 23 166 1.8E-54 T 12-10-2018 PA257_4567 192376e68dccc12be26752f8d0b0557b 167 Pfam PF14595 Thioredoxin 13 135 3.1E-23 T 12-10-2018 PA257_4567 192376e68dccc12be26752f8d0b0557b 167 Gene3D G3DSA:3.40.30.10 1 167 7.7E-70 T 12-10-2018 PA257_4567 192376e68dccc12be26752f8d0b0557b 167 SUPERFAMILY SSF52833 10 163 1.27E-9 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_2895 72d2a9d40c62d965236a57b963062d14 100 Gene3D G3DSA:3.10.450.40 30 100 4.5E-10 T 12-10-2018 PA257_2895 72d2a9d40c62d965236a57b963062d14 100 Pfam PF03413 Peptidase propeptide and YPEB domain 39 97 1.4E-10 T 12-10-2018 IPR025711 PepSY domain PA257_5728 5fc3f43726628d632907e88d94dcf315 271 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 2.5E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_5728 5fc3f43726628d632907e88d94dcf315 271 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 5.8E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site PA257_6945 344942173f9414c87a348d17922832f5 186 SUPERFAMILY SSF51161 8 139 1.3E-31 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_6945 344942173f9414c87a348d17922832f5 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 4.6E-4 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_6945 344942173f9414c87a348d17922832f5 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 1.9E-6 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_6945 344942173f9414c87a348d17922832f5 186 Gene3D G3DSA:2.160.10.10 1 182 1.6E-47 T 12-10-2018 PA257_3510 6a6405559f5b79e59948f66a6da4f831 764 Pfam PF02470 MlaD protein 628 688 2.8E-7 T 12-10-2018 IPR003399 Mce/MlaD PA257_3510 6a6405559f5b79e59948f66a6da4f831 764 Pfam PF02470 MlaD protein 153 218 3.5E-11 T 12-10-2018 IPR003399 Mce/MlaD PA257_3510 6a6405559f5b79e59948f66a6da4f831 764 Pfam PF02470 MlaD protein 277 366 4.2E-12 T 12-10-2018 IPR003399 Mce/MlaD PA257_3510 6a6405559f5b79e59948f66a6da4f831 764 Pfam PF02470 MlaD protein 39 128 6.8E-11 T 12-10-2018 IPR003399 Mce/MlaD PA257_3510 6a6405559f5b79e59948f66a6da4f831 764 Pfam PF02470 MlaD protein 513 599 8.5E-11 T 12-10-2018 IPR003399 Mce/MlaD PA257_3510 6a6405559f5b79e59948f66a6da4f831 764 Pfam PF02470 MlaD protein 392 460 2.0E-8 T 12-10-2018 IPR003399 Mce/MlaD PA257_0570 e55a691363a19a33907e941e146d99bf 138 Pfam PF11162 Protein of unknown function (DUF2946) 18 137 9.1E-9 T 12-10-2018 IPR021333 Protein of unknown function DUF2946 PA257_4394 fadd8bdbe7d2a4fb5117142b87cadcf1 135 SUPERFAMILY SSF54427 5 133 3.93E-32 T 12-10-2018 IPR032710 NTF2-like domain superfamily PA257_4394 fadd8bdbe7d2a4fb5117142b87cadcf1 135 Pfam PF07366 SnoaL-like polyketide cyclase 9 127 4.1E-38 T 12-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 PA257_4394 fadd8bdbe7d2a4fb5117142b87cadcf1 135 Gene3D G3DSA:3.10.450.50 3 128 3.0E-35 T 12-10-2018 PA257_2831 07374e6c7bd5598a06d0ab2787941e74 411 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 338 2.5E-49 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PA257_2831 07374e6c7bd5598a06d0ab2787941e74 411 Gene3D G3DSA:3.20.20.70 1 373 4.7E-114 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_2831 07374e6c7bd5598a06d0ab2787941e74 411 SUPERFAMILY SSF51395 2 348 1.01E-102 T 12-10-2018 PA257_1845 2261e3df34201f6109a9f5968da033bc 256 SUPERFAMILY SSF52096 3 252 1.53E-68 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_1845 2261e3df34201f6109a9f5968da033bc 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PA257_1845 2261e3df34201f6109a9f5968da033bc 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 246 9.3E-41 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PA257_1845 2261e3df34201f6109a9f5968da033bc 256 Gene3D G3DSA:3.90.226.10 1 198 3.9E-73 T 12-10-2018 PA257_5312 395c720d17d57d0aacd49244696eaac7 200 SUPERFAMILY SSF143120 7 51 2.88E-5 T 12-10-2018 IPR036165 YefM-like superfamily PA257_5312 395c720d17d57d0aacd49244696eaac7 200 Pfam PF05598 Transposase domain (DUF772) 93 143 5.3E-11 T 12-10-2018 IPR008490 Transposase InsH, N-terminal PA257_2101 165ee7ff54e8cc78b5ccf5dde78b6ed8 60 Pfam PF06945 Protein of unknown function (DUF1289) 3 47 2.2E-18 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 PA257_0036 a3ac46d1c0fbc91b6a99892f491533e7 428 Pfam PF13145 PPIC-type PPIASE domain 271 387 1.4E-6 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 PA257_0036 a3ac46d1c0fbc91b6a99892f491533e7 428 SUPERFAMILY SSF54534 292 383 3.79E-11 T 12-10-2018 PA257_0036 a3ac46d1c0fbc91b6a99892f491533e7 428 Gene3D G3DSA:3.10.50.40 288 388 1.9E-8 T 12-10-2018 PA257_0239 d7723e7e7340190e2b97dc87028b14f0 195 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 2 186 7.8E-57 T 12-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 PA257_0239 d7723e7e7340190e2b97dc87028b14f0 195 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 7 187 7.3E-53 T 12-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 PA257_0239 d7723e7e7340190e2b97dc87028b14f0 195 Hamap MF_00650 Phosphoribosyl-dephospho-CoA transferase [mdcG]. 1 192 33.06 T 12-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 PA257_0461 207860e2caf7f3dc590ed15c4db8b659 107 Pfam PF11872 Protein of unknown function (DUF3392) 5 106 4.0E-41 T 12-10-2018 IPR021813 Protein of unknown function DUF3392 PA257_0085 4dec428131cca2f74bc3c9c767ddbf7d 180 Gene3D G3DSA:2.160.10.10 1 180 4.8E-53 T 12-10-2018 PA257_0085 4dec428131cca2f74bc3c9c767ddbf7d 180 SUPERFAMILY SSF51161 3 173 1.21E-43 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily PA257_0085 4dec428131cca2f74bc3c9c767ddbf7d 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 128 1.8E-6 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_0085 4dec428131cca2f74bc3c9c767ddbf7d 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 45 2.0E-5 T 12-10-2018 IPR001451 Hexapeptide repeat PA257_4796 b47711046972302806361869534dfd17 158 SUPERFAMILY SSF54534 85 145 2.35E-6 T 12-10-2018 PA257_0985 69c779a55bc45688745f2f260e91db2e 272 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 27 156 4.3E-8 T 12-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal PA257_0985 69c779a55bc45688745f2f260e91db2e 272 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 21 263 3.6E-38 T 12-10-2018 IPR011928 Bacteriophage phiJL001, Gp84 PA257_0985 69c779a55bc45688745f2f260e91db2e 272 Pfam PF09356 Phage conserved hypothetical protein BR0599 188 263 1.3E-16 T 12-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 SUPERFAMILY SSF54719 88 201 3.27E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 4.1E-37 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 SUPERFAMILY SSF46609 1 90 1.31E-37 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.9E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 3.9E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.9E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 3.9E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 3.9E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 5.0E-33 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 PIRSF PIRSF000349 1 203 7.9E-80 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 Gene3D G3DSA:1.10.287.990 20 89 3.1E-29 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_5536 5cfe4531640d7a7710ea4d31c0fc9e82 203 Gene3D G3DSA:2.40.500.20 90 203 4.1E-44 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PA257_0289 084984dfbe8e5431381b39be9029e6c8 465 Pfam PF11678 Protein of unknown function (DUF3274) 133 434 1.1E-99 T 12-10-2018 IPR021692 Protein of unknown function DUF3274 PA257_6486 9005f94977936c93055fbe3ce8c74354 146 PIRSF PIRSF029208 1 146 2.9E-63 T 12-10-2018 IPR016912 Bacteriophage P2, GpU PA257_6486 9005f94977936c93055fbe3ce8c74354 146 Pfam PF06995 Phage P2 GpU 6 125 2.6E-46 T 12-10-2018 IPR009734 Myoviridae, GpU PA257_4273 0d9784da6a67d15943fd773d8c55aa5b 308 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 5 302 5.8E-166 T 12-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 PA257_4273 0d9784da6a67d15943fd773d8c55aa5b 308 SUPERFAMILY SSF88713 4 303 1.51E-101 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PA257_4273 0d9784da6a67d15943fd773d8c55aa5b 308 Pfam PF01522 Polysaccharide deacetylase 76 164 2.9E-17 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 PA257_4273 0d9784da6a67d15943fd773d8c55aa5b 308 Gene3D G3DSA:3.20.20.370 1 308 9.2E-119 T 12-10-2018 PA257_4568 ad202a13b7f4bbfe5dff5e53bee15fc7 85 Pfam PF10976 Protein of unknown function (DUF2790) 11 83 3.1E-25 T 12-10-2018 IPR021245 Protein of unknown function DUF2790 PA257_4568 ad202a13b7f4bbfe5dff5e53bee15fc7 85 Gene3D G3DSA:2.30.140.50 17 84 8.3E-22 T 12-10-2018 PA257_1318 ea1a33050d944cf731fdeb06fddebc34 156 SUPERFAMILY SSF55961 1 152 4.03E-8 T 12-10-2018 PA257_3514 330a34e99fc51701eb8c41376b72d35d 391 Pfam PF13378 Enolase C-terminal domain-like 163 382 1.8E-55 T 12-10-2018 IPR029065 Enolase C-terminal domain-like PA257_3514 330a34e99fc51701eb8c41376b72d35d 391 SUPERFAMILY SSF51604 127 388 3.28E-69 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PA257_3514 330a34e99fc51701eb8c41376b72d35d 391 Gene3D G3DSA:3.20.20.120 137 385 5.8E-191 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PA257_3514 330a34e99fc51701eb8c41376b72d35d 391 SMART SM00922 159 262 2.4E-22 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PA257_3514 330a34e99fc51701eb8c41376b72d35d 391 SUPERFAMILY SSF54826 1 143 1.13E-33 T 12-10-2018 PA257_3514 330a34e99fc51701eb8c41376b72d35d 391 Gene3D G3DSA:3.30.390.10 3 136 5.8E-191 T 12-10-2018 IPR029017 Enolase-like, N-terminal PA257_3514 330a34e99fc51701eb8c41376b72d35d 391 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 139 1.3E-20 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PA257_3214 a8859af4f39e353148b5599666832d98 434 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 47 414 2.6E-133 T 12-10-2018 IPR013397 CRISPR-associated protein Csy1 PA257_3214 a8859af4f39e353148b5599666832d98 434 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 46 422 6.7E-116 T 12-10-2018 IPR013397 CRISPR-associated protein Csy1 PA257_6468 d61f93cdc67fd534ab815002ffb6b93e 70 Pfam PF05489 Phage Tail Protein X 7 59 1.4E-26 T 12-10-2018 IPR008861 Phage Tail Protein X-like PA257_6468 d61f93cdc67fd534ab815002ffb6b93e 70 Gene3D G3DSA:3.10.350.10 4 70 1.5E-28 T 12-10-2018 IPR036779 LysM domain superfamily PA257_5561 208e7b4832cc49bb5bb9fad765961e10 269 PIRSF PIRSF012281 3 269 5.7E-127 T 12-10-2018 IPR012039 Uncharacterised conserved protein UCP012281 PA257_5561 208e7b4832cc49bb5bb9fad765961e10 269 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 199 255 1.7E-16 T 12-10-2018 IPR019220 Domain of unknown function DUF2135 PA257_6047 419bdf4b54f1d60b04e47ae4c81d056c 1283 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 913 983 9.5E-22 T 12-10-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal PA257_6047 419bdf4b54f1d60b04e47ae4c81d056c 1283 Pfam PF06791 Prophage tail length tape measure protein 201 336 6.9E-24 T 12-10-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal PA257_6047 419bdf4b54f1d60b04e47ae4c81d056c 1283 Pfam PF06791 Prophage tail length tape measure protein 327 474 8.2E-42 T 12-10-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal PA257_2418 dabb9ac17e5429535645b32a4de56dcf 274 Gene3D G3DSA:3.40.50.720 1 274 1.3E-71 T 12-10-2018 PA257_2418 dabb9ac17e5429535645b32a4de56dcf 274 SUPERFAMILY SSF51735 1 240 6.22E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_2418 dabb9ac17e5429535645b32a4de56dcf 274 Pfam PF00106 short chain dehydrogenase 6 196 3.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2418 dabb9ac17e5429535645b32a4de56dcf 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PA257_2418 dabb9ac17e5429535645b32a4de56dcf 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2418 dabb9ac17e5429535645b32a4de56dcf 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.8E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2418 dabb9ac17e5429535645b32a4de56dcf 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.8E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2418 dabb9ac17e5429535645b32a4de56dcf 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.8E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_2418 dabb9ac17e5429535645b32a4de56dcf 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.8E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_1012 3752d0aca8ccb600b97e62ab0a2a004f 76 Gene3D G3DSA:1.10.260.40 8 75 4.0E-5 T 12-10-2018 PA257_1012 3752d0aca8ccb600b97e62ab0a2a004f 76 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 14 68 7.0E-26 T 12-10-2018 IPR026365 Phage-associated protein, BcepMu gp16 family PA257_1012 3752d0aca8ccb600b97e62ab0a2a004f 76 SUPERFAMILY SSF47413 15 70 3.41E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_5446 6c1b151816c261e4f6e1b16748439f60 227 SMART SM00448 1 113 4.5E-46 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5446 6c1b151816c261e4f6e1b16748439f60 227 SUPERFAMILY SSF52172 1 173 2.7E-43 T 12-10-2018 IPR011006 CheY-like superfamily PA257_5446 6c1b151816c261e4f6e1b16748439f60 227 Gene3D G3DSA:3.40.50.2300 1 120 2.6E-41 T 12-10-2018 PA257_5446 6c1b151816c261e4f6e1b16748439f60 227 Gene3D G3DSA:1.10.10.10 121 225 3.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_5446 6c1b151816c261e4f6e1b16748439f60 227 Pfam PF00072 Response regulator receiver domain 3 113 6.9E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PA257_5446 6c1b151816c261e4f6e1b16748439f60 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.7E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_5446 6c1b151816c261e4f6e1b16748439f60 227 SMART SM00862 146 220 2.0E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PA257_6382 ec5519df07c4e0270b0fe920a9877d36 266 Pfam PF05013 N-formylglutamate amidohydrolase 13 230 3.7E-71 T 12-10-2018 IPR007709 N-formylglutamate amidohydrolase PA257_6382 ec5519df07c4e0270b0fe920a9877d36 266 Gene3D G3DSA:3.40.630.40 1 263 8.0E-79 T 12-10-2018 PA257_6382 ec5519df07c4e0270b0fe920a9877d36 266 SUPERFAMILY SSF53187 5 263 5.44E-82 T 12-10-2018 PA257_6382 ec5519df07c4e0270b0fe920a9877d36 266 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 4 262 5.9E-123 T 12-10-2018 IPR010247 N-formylglutamate deformylase PA257_0074 c3641bf4249b0cff7cfdd5906774b0ed 168 Gene3D G3DSA:1.20.120.450 1 168 6.8E-62 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PA257_0074 c3641bf4249b0cff7cfdd5906774b0ed 168 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 6.2E-66 T 12-10-2018 IPR018531 Protein of unknown function DUF1993 PA257_0074 c3641bf4249b0cff7cfdd5906774b0ed 168 SUPERFAMILY SSF109854 4 166 2.01E-65 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PA257_2756 18fadafc9df365265f5faa9b55cca86a 145 Pfam PF12158 Protein of unknown function (DUF3592) 9 133 4.7E-17 T 12-10-2018 IPR021994 Protein of unknown function DUF3592 PA257_6672 b2b19d8010671dc562ac12b02fa30f1c 654 SUPERFAMILY SSF56349 390 560 2.68E-11 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_6672 b2b19d8010671dc562ac12b02fa30f1c 654 Gene3D G3DSA:1.10.443.10 383 578 2.4E-6 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_0759 9a140e45dcf05203adea3c12b086e2b7 86 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 1 79 2.0E-41 T 12-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 PA257_0759 9a140e45dcf05203adea3c12b086e2b7 86 Pfam PF11112 Pyocin activator protein PrtN 1 71 1.6E-27 T 12-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 PA257_6034 4896ccb6258f3b172fc99134f4ea6468 416 Pfam PF04233 Phage Mu protein F like protein 56 169 2.9E-16 T 12-10-2018 IPR006528 Phage head morphogenesis domain PA257_5173 c8ee9337d83cb7695c24ed821169febe 81 Pfam PF06611 Protein of unknown function (DUF1145) 4 58 7.7E-14 T 12-10-2018 IPR009525 Protein of unknown function DUF1145 PA257_3669 083941ffe39f25aa96d21cc0cfe40e72 351 SUPERFAMILY SSF56935 195 323 6.04E-5 T 12-10-2018 PA257_3669 083941ffe39f25aa96d21cc0cfe40e72 351 Pfam PF05275 Copper resistance protein B precursor (CopB) 147 351 9.5E-93 T 12-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 PA257_3950 895990d93ee6dbc7122f98ecffdcf3a9 360 SUPERFAMILY SSF161098 123 339 6.93E-14 T 12-10-2018 IPR035906 MetI-like superfamily PA257_3950 895990d93ee6dbc7122f98ecffdcf3a9 360 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 147 354 2.4E-36 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_3950 895990d93ee6dbc7122f98ecffdcf3a9 360 Gene3D G3DSA:1.10.3720.10 117 350 2.3E-16 T 12-10-2018 IPR035906 MetI-like superfamily PA257_2520 9f9e1d85e2171b7b8108e71ac8a5f7bc 230 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 207 5.5E-96 T 12-10-2018 IPR021548 Protein of unknown function DUF2895 PA257_2520 9f9e1d85e2171b7b8108e71ac8a5f7bc 230 Pfam PF11444 Protein of unknown function (DUF2895) 7 206 2.5E-90 T 12-10-2018 IPR021548 Protein of unknown function DUF2895 PA257_3789 2a239cb67186306497e940a4e4517417 226 Pfam PF03412 Peptidase C39 family 47 178 6.3E-21 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PA257_3789 2a239cb67186306497e940a4e4517417 226 Gene3D G3DSA:3.90.70.10 34 190 2.5E-35 T 12-10-2018 PA257_0337 888b7820e1cbc6f17d26939545ce9a75 404 Gene3D G3DSA:1.20.1250.20 201 385 1.7E-22 T 12-10-2018 PA257_0337 888b7820e1cbc6f17d26939545ce9a75 404 SUPERFAMILY SSF103473 7 386 3.66E-47 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_0337 888b7820e1cbc6f17d26939545ce9a75 404 Gene3D G3DSA:1.20.1250.20 8 200 5.3E-12 T 12-10-2018 PA257_0337 888b7820e1cbc6f17d26939545ce9a75 404 Pfam PF07690 Major Facilitator Superfamily 27 347 5.8E-24 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_5067 caad337d7391f17132232b3a30b9e05b 112 ProDom PD394905 PM1122 UNCHARACTERIZED 4 78 3.0E-17 T 12-10-2018 PA257_4033 f02a0ab94d4803bf0716bae2d0afe1de 123 SUPERFAMILY SSF52833 43 121 5.13E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_4033 f02a0ab94d4803bf0716bae2d0afe1de 123 Pfam PF13417 Glutathione S-transferase, N-terminal domain 45 121 4.2E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PA257_4033 f02a0ab94d4803bf0716bae2d0afe1de 123 Gene3D G3DSA:3.40.30.10 40 123 4.1E-13 T 12-10-2018 PA257_4529 84714106c48ce87005ee06d8adc50fb5 222 SUPERFAMILY SSF48008 82 215 6.54E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_4529 84714106c48ce87005ee06d8adc50fb5 222 Gene3D G3DSA:1.20.120.530 81 219 1.6E-34 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PA257_4529 84714106c48ce87005ee06d8adc50fb5 222 Pfam PF07729 FCD domain 85 204 2.5E-28 T 12-10-2018 IPR011711 GntR, C-terminal PA257_4529 84714106c48ce87005ee06d8adc50fb5 222 Gene3D G3DSA:1.10.10.10 11 76 4.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PA257_4529 84714106c48ce87005ee06d8adc50fb5 222 SMART SM00345 17 75 3.9E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4529 84714106c48ce87005ee06d8adc50fb5 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 6.6E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PA257_4529 84714106c48ce87005ee06d8adc50fb5 222 SUPERFAMILY SSF46785 12 79 8.52E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_4529 84714106c48ce87005ee06d8adc50fb5 222 SMART SM00895 85 206 1.2E-19 T 12-10-2018 IPR011711 GntR, C-terminal PA257_6298 9c7e5d8b58b547c49b348688bd8b1b14 373 Pfam PF00534 Glycosyl transferases group 1 184 348 2.2E-32 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 PA257_6298 9c7e5d8b58b547c49b348688bd8b1b14 373 Gene3D G3DSA:3.40.50.2000 12 169 2.8E-108 T 12-10-2018 PA257_6298 9c7e5d8b58b547c49b348688bd8b1b14 373 Gene3D G3DSA:3.40.50.2000 170 335 2.8E-108 T 12-10-2018 PA257_6298 9c7e5d8b58b547c49b348688bd8b1b14 373 SUPERFAMILY SSF53756 4 363 3.14E-60 T 12-10-2018 PA257_0883 f74f2d7c1a091d526f2d870505956e9a 405 SUPERFAMILY SSF51569 4 389 1.76E-143 T 12-10-2018 PA257_0883 f74f2d7c1a091d526f2d870505956e9a 405 Gene3D G3DSA:3.20.20.70 36 391 4.7E-139 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_0883 f74f2d7c1a091d526f2d870505956e9a 405 Pfam PF01474 Class-II DAHP synthetase family 160 383 5.7E-78 T 12-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PA257_1539 4394fbd93de4190c46ccfff3c4c079cd 274 SUPERFAMILY SSF51621 5 268 3.54E-62 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PA257_1539 4394fbd93de4190c46ccfff3c4c079cd 274 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 252 1.4E-71 T 12-10-2018 PA257_1539 4394fbd93de4190c46ccfff3c4c079cd 274 Gene3D G3DSA:3.20.20.60 1 234 2.4E-69 T 12-10-2018 PA257_5355 75f1a05d7750ddb3b107348ab20433a1 154 Pfam PF07811 TadE-like protein 12 54 3.1E-6 T 12-10-2018 IPR012495 TadE-like PA257_2594 fc7845e9e6a7cf6a8a6e9e71b9d2bdd1 128 Pfam PF01934 Protein of unknown function DUF86 13 109 4.6E-23 T 12-10-2018 IPR008201 Protein of unknown function DUF86 PA257_2594 fc7845e9e6a7cf6a8a6e9e71b9d2bdd1 128 SUPERFAMILY SSF81593 8 110 2.94E-5 T 12-10-2018 PA257_6473 55f9394b9415d42069f4e2abeb0993d5 178 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 1.4E-41 T 12-10-2018 IPR009678 Bacteriophage tail completion protein R PA257_4330 12e4085a60831ebb06f0217773678297 296 SMART SM00260 146 281 6.1E-22 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_4330 12e4085a60831ebb06f0217773678297 296 PIRSF PIRSF020479 1 296 8.4E-114 T 12-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like PA257_4330 12e4085a60831ebb06f0217773678297 296 SUPERFAMILY SSF50341 148 282 2.75E-15 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PA257_4330 12e4085a60831ebb06f0217773678297 296 Pfam PF01584 CheW-like domain 150 281 1.8E-13 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PA257_6461 886c9e1976ced13b4736a6482457794d 283 Pfam PF10547 P22_AR N-terminal domain 10 119 4.8E-44 T 12-10-2018 IPR018875 Antirepressor protein ANT, N-terminal PA257_6461 886c9e1976ced13b4736a6482457794d 283 PRINTS PR01994 Antirepressor protein ANT signature 27 48 3.0E-30 T 12-10-2018 IPR018875 Antirepressor protein ANT, N-terminal PA257_6461 886c9e1976ced13b4736a6482457794d 283 PRINTS PR01994 Antirepressor protein ANT signature 95 117 3.0E-30 T 12-10-2018 IPR018875 Antirepressor protein ANT, N-terminal PA257_6461 886c9e1976ced13b4736a6482457794d 283 PRINTS PR01994 Antirepressor protein ANT signature 71 94 3.0E-30 T 12-10-2018 IPR018875 Antirepressor protein ANT, N-terminal PA257_6346 a116e7fe727122180ca8d6e3e5f14531 123 Gene3D G3DSA:3.30.2020.30 1 93 5.4E-20 T 12-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 PA257_6346 a116e7fe727122180ca8d6e3e5f14531 123 Pfam PF06155 Protein of unknown function (DUF971) 7 88 1.1E-23 T 12-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 PA257_2440 1535a6ec319a86861c7240ee19cb56e7 523 Gene3D G3DSA:3.30.70.270 346 521 4.3E-58 T 12-10-2018 PA257_2440 1535a6ec319a86861c7240ee19cb56e7 523 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 357 520 1.7E-51 T 12-10-2018 IPR000160 GGDEF domain PA257_2440 1535a6ec319a86861c7240ee19cb56e7 523 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 517 2.2E-47 T 12-10-2018 IPR000160 GGDEF domain PA257_2440 1535a6ec319a86861c7240ee19cb56e7 523 SUPERFAMILY SSF55073 364 520 6.59E-49 T 12-10-2018 IPR029787 Nucleotide cyclase PA257_2440 1535a6ec319a86861c7240ee19cb56e7 523 SMART SM00267 348 521 7.9E-63 T 12-10-2018 IPR000160 GGDEF domain PA257_5041 73a687ef674d4ec8c8c92a4b65abb611 393 Pfam PF04860 Phage portal protein 40 369 1.9E-73 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein PA257_5041 73a687ef674d4ec8c8c92a4b65abb611 393 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 30 375 1.2E-69 T 12-10-2018 IPR006427 Phage portal protein, HK97 PA257_3616 c00678b20a0d4a2b7a8d63faf12db898 80 Gene3D G3DSA:2.30.140.50 17 80 6.0E-15 T 12-10-2018 PA257_3616 c00678b20a0d4a2b7a8d63faf12db898 80 Pfam PF10976 Protein of unknown function (DUF2790) 22 78 8.4E-19 T 12-10-2018 IPR021245 Protein of unknown function DUF2790 PA257_5555 270580b789722b01220fc646a97333d6 128 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 117 1.9E-26 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PA257_5555 270580b789722b01220fc646a97333d6 128 Gene3D G3DSA:1.20.1290.10 3 123 1.2E-42 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_5555 270580b789722b01220fc646a97333d6 128 SUPERFAMILY SSF69118 5 119 2.09E-39 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PA257_2002 a9d9f429b05e47e4f887a12fd57b2094 239 Gene3D G3DSA:1.10.150.690 25 115 5.6E-30 T 12-10-2018 PA257_2002 a9d9f429b05e47e4f887a12fd57b2094 239 Pfam PF09836 Putative DNA-binding domain 1 85 1.9E-27 T 12-10-2018 IPR018640 Putative DNA-binding domain, bacteria PA257_3921 98c9e377505fd3b416e7d01502f92fad 165 PIRSF PIRSF030820 1 165 2.2E-67 T 12-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 PA257_3921 98c9e377505fd3b416e7d01502f92fad 165 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 161 4.6E-46 T 12-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 PA257_0371 09c66b8629492c178c7ad4d1be47f0f9 795 Gene3D G3DSA:1.10.439.10 13 176 1.5E-51 T 12-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 PA257_0371 09c66b8629492c178c7ad4d1be47f0f9 795 Gene3D G3DSA:2.30.120.10 320 391 7.6E-138 T 12-10-2018 PA257_0371 09c66b8629492c178c7ad4d1be47f0f9 795 SUPERFAMILY SSF56235 39 794 1.44E-213 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_0371 09c66b8629492c178c7ad4d1be47f0f9 795 Pfam PF01804 Penicillin amidase 42 782 4.2E-201 T 12-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 PA257_0371 09c66b8629492c178c7ad4d1be47f0f9 795 PIRSF PIRSF001227 1 794 3.3E-170 T 12-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 PA257_0371 09c66b8629492c178c7ad4d1be47f0f9 795 Gene3D G3DSA:1.10.1400.10 542 678 7.6E-138 T 12-10-2018 PA257_0371 09c66b8629492c178c7ad4d1be47f0f9 795 Gene3D G3DSA:3.60.20.10 248 769 7.6E-138 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PA257_3684 c260787f614ae50518dde38e8fdb9ba1 664 SUPERFAMILY SSF56300 161 565 3.6E-7 T 12-10-2018 PA257_5182 2697c7e9e77a1cd65e9e6e05c875c997 300 SUPERFAMILY SSF53474 12 272 8.94E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_5182 2697c7e9e77a1cd65e9e6e05c875c997 300 Pfam PF00561 alpha/beta hydrolase fold 29 253 3.7E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PA257_5182 2697c7e9e77a1cd65e9e6e05c875c997 300 Gene3D G3DSA:3.40.50.1820 2 273 4.4E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3189 d76f93e003e67d47551a14328c2c520d 310 SUPERFAMILY SSF88713 42 273 1.67E-6 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PA257_3189 d76f93e003e67d47551a14328c2c520d 310 Pfam PF01522 Polysaccharide deacetylase 70 220 4.0E-5 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 PA257_5084 d79a532b9f0b266db54e06584511a1f5 362 Pfam PF11876 Protein of unknown function (DUF3396) 125 331 4.4E-64 T 12-10-2018 IPR021815 Protein of unknown function DUF3396 PA257_6469 3c966079b7eff4f0f496940cd9ed5c02 117 Pfam PF16931 Putative phage holin 1 116 3.6E-12 T 12-10-2018 IPR032637 Putative phage holin-like PA257_4774 aeb3eb19f1661844d89df8ddee0a228a 293 Pfam PF00691 OmpA family 195 274 1.3E-13 T 12-10-2018 IPR006665 OmpA-like domain PA257_4774 aeb3eb19f1661844d89df8ddee0a228a 293 SUPERFAMILY SSF103088 168 280 6.28E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_4774 aeb3eb19f1661844d89df8ddee0a228a 293 Gene3D G3DSA:3.30.1330.60 138 286 1.2E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily PA257_0832 c5c86202de5c0ef2ca46c2a2421e4f3d 211 SUPERFAMILY SSF50447 1 208 1.24E-81 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PA257_0832 c5c86202de5c0ef2ca46c2a2421e4f3d 211 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 204 1.6E-92 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0832 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Pfam PF00297 Ribosomal protein L3 44 182 3.3E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PA257_0832 c5c86202de5c0ef2ca46c2a2421e4f3d 211 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site PA257_0832 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 207 40.239 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PA257_0832 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Gene3D G3DSA:2.40.50.620 33 93 3.6E-15 T 12-10-2018 PA257_0832 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Gene3D G3DSA:2.40.30.10 128 210 8.8E-19 T 12-10-2018 PA257_1859 137893beae7a1acd36d0669a92f3c588 88 Pfam PF07130 YebG protein 1 72 2.6E-26 T 12-10-2018 IPR009813 Uncharacterised protein family YebG PA257_1859 137893beae7a1acd36d0669a92f3c588 88 Gene3D G3DSA:1.10.10.710 19 88 1.2E-30 T 12-10-2018 IPR038627 YebG-like superfamily PA257_0745 0ce5e9223f2d234cab43ab2e1a53de5b 338 Pfam PF01636 Phosphotransferase enzyme family 37 259 2.4E-35 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase PA257_0745 0ce5e9223f2d234cab43ab2e1a53de5b 338 SUPERFAMILY SSF56112 30 318 9.48E-55 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_0745 0ce5e9223f2d234cab43ab2e1a53de5b 338 Gene3D G3DSA:3.30.200.20 5 103 6.9E-23 T 12-10-2018 PA257_0745 0ce5e9223f2d234cab43ab2e1a53de5b 338 Gene3D G3DSA:3.90.1200.10 104 337 2.4E-67 T 12-10-2018 PA257_5004 e85be008352dd24033576b461ec9443b 670 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 29 501 5.4E-175 T 12-10-2018 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 PA257_5004 e85be008352dd24033576b461ec9443b 670 Pfam PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal 505 665 2.3E-47 T 12-10-2018 IPR031331 Neutral/alkaline non-lysosomal ceramidase, C-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119 PA257_5004 e85be008352dd24033576b461ec9443b 670 Gene3D G3DSA:2.60.40.2300 536 670 3.6E-51 T 12-10-2018 IPR038445 Neutral ceramidase, C-terminal domain superfamily KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 Gene3D G3DSA:2.40.30.170 321 409 1.3E-10 T 12-10-2018 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 Gene3D G3DSA:2.40.50.100 148 320 1.3E-10 T 12-10-2018 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 ProSitePatterns PS00543 HlyD family secretion proteins signature. 396 418 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 Gene3D G3DSA:1.10.287.470 149 283 1.3E-10 T 12-10-2018 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 Pfam PF00529 HlyD membrane-fusion protein of T1SS 23 388 2.0E-20 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 Gene3D G3DSA:2.40.50.100 54 127 5.7E-7 T 12-10-2018 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 12 431 9.4E-122 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 296 317 7.0E-63 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 353 376 7.0E-63 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 63 83 7.0E-63 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 353 7.0E-63 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 21 44 7.0E-63 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 396 411 7.0E-63 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 411 431 7.0E-63 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PA257_4553 937f34d461ca0c798ff53cb25ac94da1 432 SUPERFAMILY SSF111369 54 111 3.01E-6 T 12-10-2018 PA257_5508 025ae64b9e8fdbb8e0b897dbbb8f608a 148 Pfam PF06295 Protein of unknown function (DUF1043) 14 131 2.4E-20 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 PA257_2711 b92b81b43000a7737d654b856b48fe46 217 Pfam PF08813 Phage tail tube protein, TTP 51 214 3.2E-58 T 12-10-2018 IPR014918 Phage tail tube protein 3 PA257_5292 6d4cf1ddcce78fcd1f82c127017a30f6 249 Gene3D G3DSA:3.20.20.450 9 246 2.6E-9 T 12-10-2018 IPR035919 EAL domain superfamily PA257_5292 6d4cf1ddcce78fcd1f82c127017a30f6 249 SUPERFAMILY SSF141868 11 242 1.57E-6 T 12-10-2018 IPR035919 EAL domain superfamily PA257_5292 6d4cf1ddcce78fcd1f82c127017a30f6 249 Pfam PF00563 EAL domain 12 238 2.7E-11 T 12-10-2018 IPR001633 EAL domain PA257_3474 5a3a17ef22c4dd9d73e02a9bcc79186a 1004 Pfam PF01526 Tn3 transposase DDE domain 580 966 4.2E-140 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 PA257_3474 5a3a17ef22c4dd9d73e02a9bcc79186a 1004 Pfam PF13700 Domain of unknown function (DUF4158) 5 163 8.9E-35 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 PA257_4936 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Pfam PF01381 Helix-turn-helix 7 60 9.7E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_4936 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Gene3D G3DSA:1.10.260.40 1 69 1.9E-20 T 12-10-2018 PA257_4936 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Gene3D G3DSA:2.10.109.10 127 234 1.6E-7 T 12-10-2018 PA257_4936 d341dc888990dd6c8e58fb6d7fdfbe5f 237 SMART SM00530 6 60 3.3E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PA257_4936 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Pfam PF00717 Peptidase S24-like 148 214 1.4E-12 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PA257_4936 d341dc888990dd6c8e58fb6d7fdfbe5f 237 SUPERFAMILY SSF51306 101 233 6.54E-22 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PA257_4936 d341dc888990dd6c8e58fb6d7fdfbe5f 237 SUPERFAMILY SSF47413 3 61 2.49E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PA257_1349 5cf413743d303a07265d1615f1b2f460 182 Pfam PF05433 Glycine zipper 2TM domain 72 113 2.3E-10 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 PA257_4476 f7a0f7666fc6327d47dec39f4c091c38 209 Pfam PF00510 Cytochrome c oxidase subunit III 20 207 8.8E-17 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4476 f7a0f7666fc6327d47dec39f4c091c38 209 SUPERFAMILY SSF81452 18 207 5.49E-60 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4476 f7a0f7666fc6327d47dec39f4c091c38 209 Gene3D G3DSA:1.20.120.80 24 209 1.0E-59 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_4476 f7a0f7666fc6327d47dec39f4c091c38 209 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 30 209 5.4E-86 T 12-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 PA257_3773 33d48ce0e48a81be33c8b347a727723b 115 Gene3D G3DSA:3.30.10.10 48 114 1.2E-19 T 12-10-2018 PA257_3773 33d48ce0e48a81be33c8b347a727723b 115 Pfam PF11720 Peptidase inhibitor I78 family 51 115 8.5E-17 T 12-10-2018 IPR021719 Proteinase inhibitor I78 PA257_2558 a996e6dd78d1cec60db15f6e8f3acb97 223 Pfam PF01695 IstB-like ATP binding protein 12 188 1.5E-60 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 PA257_2558 a996e6dd78d1cec60db15f6e8f3acb97 223 Gene3D G3DSA:3.40.50.300 20 207 1.9E-38 T 12-10-2018 PA257_2558 a996e6dd78d1cec60db15f6e8f3acb97 223 SUPERFAMILY SSF52540 54 197 1.72E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_2558 a996e6dd78d1cec60db15f6e8f3acb97 223 PIRSF PIRSF003073 1 210 1.5E-61 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein PA257_2558 a996e6dd78d1cec60db15f6e8f3acb97 223 SMART SM00382 55 192 4.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5825 70d51b58d47bcc95b17720f4e3257d25 195 Pfam PF03923 Uncharacterized lipoprotein 39 192 7.7E-12 T 12-10-2018 IPR005619 Uncharacterised protein family, YajG PA257_2559 19b56cc35a7d7fac803cb488a2f7b358 225 Pfam PF01526 Tn3 transposase DDE domain 1 200 1.2E-60 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 PA257_0335 8177fbe2c2c0e9d7a742f77272f374bc 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 69 2.9E-12 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PA257_0335 8177fbe2c2c0e9d7a742f77272f374bc 94 SUPERFAMILY SSF54909 6 81 6.52E-10 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_0335 8177fbe2c2c0e9d7a742f77272f374bc 94 Gene3D G3DSA:3.30.70.100 2 90 4.5E-9 T 12-10-2018 PA257_0929 be295faa1302faba6a2ee674cc261519 108 SUPERFAMILY SSF110857 1 106 3.92E-21 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily PA257_0929 be295faa1302faba6a2ee674cc261519 108 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 106 9.0E-16 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like PA257_0929 be295faa1302faba6a2ee674cc261519 108 Gene3D G3DSA:3.10.490.10 1 108 4.2E-19 T 12-10-2018 PA257_2515 bc96efae9044f1e576a49fee18e3e387 263 Gene3D G3DSA:3.40.30.10 67 238 2.8E-34 T 12-10-2018 PA257_2515 bc96efae9044f1e576a49fee18e3e387 263 Pfam PF13462 Thioredoxin 68 208 6.0E-19 T 12-10-2018 IPR012336 Thioredoxin-like fold PA257_2515 bc96efae9044f1e576a49fee18e3e387 263 SUPERFAMILY SSF52833 37 233 1.63E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_6868 40b918f210eae4775d90951b1b57c065 434 TIGRFAM TIGR00784 citMHS: citrate transporter 1 429 1.8E-190 T 12-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 PA257_6868 40b918f210eae4775d90951b1b57c065 434 Pfam PF03600 Citrate transporter 13 377 5.7E-56 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 PA257_4115 0069dce9ecc94dbc4248fdee9f434924 595 Pfam PF05947 Type VI secretion system, TssF 5 594 4.7E-179 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like PA257_4115 0069dce9ecc94dbc4248fdee9f434924 595 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 595 5.5E-181 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like PA257_4115 0069dce9ecc94dbc4248fdee9f434924 595 PIRSF PIRSF028304 1 595 1.3E-183 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like PA257_5694 f1d5479686f3821f7c1f0a207fe0c4c6 128 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 13 124 4.6E-40 T 12-10-2018 IPR021877 Protein of unknown function DUF3487 PA257_5694 f1d5479686f3821f7c1f0a207fe0c4c6 128 Pfam PF11990 Protein of unknown function (DUF3487) 11 125 1.1E-36 T 12-10-2018 IPR021877 Protein of unknown function DUF3487 PA257_1253 fdbe21e03cbfb795a7a5773b1bae6969 517 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 39 125 1.2E-17 T 12-10-2018 IPR032093 Phospholipase D, N-terminal PA257_1253 fdbe21e03cbfb795a7a5773b1bae6969 517 Gene3D G3DSA:3.60.21.70 152 501 1.6E-67 T 12-10-2018 IPR038607 PhoD-like superfamily PA257_1253 fdbe21e03cbfb795a7a5773b1bae6969 517 SUPERFAMILY SSF56300 134 514 6.4E-45 T 12-10-2018 PA257_1253 fdbe21e03cbfb795a7a5773b1bae6969 517 Pfam PF09423 PhoD-like phosphatase 145 498 1.1E-87 T 12-10-2018 IPR018946 Alkaline phosphatase D-related PA257_1869 2ef33bb259949c4c2330d7a10c9c058b 95 Pfam PF12021 Protein of unknown function (DUF3509) 6 88 8.5E-28 T 12-10-2018 IPR021898 Protein of unknown function DUF3509 PA257_3871 b02b0a4221cbb43b60fbe99fe7581eef 192 Gene3D G3DSA:1.10.3210.10 3 187 7.8E-45 T 12-10-2018 PA257_3871 b02b0a4221cbb43b60fbe99fe7581eef 192 SUPERFAMILY SSF109604 7 179 7.46E-38 T 12-10-2018 PA257_3871 b02b0a4221cbb43b60fbe99fe7581eef 192 Pfam PF13023 HD domain 16 171 9.9E-41 T 12-10-2018 IPR006674 HD domain PA257_5768 747042d35713f2d5476a46137a747a1d 478 SUPERFAMILY SSF56935 36 478 2.01E-83 T 12-10-2018 PA257_5768 747042d35713f2d5476a46137a747a1d 478 Gene3D G3DSA:2.40.160.60 36 478 1.3E-174 T 12-10-2018 PA257_5768 747042d35713f2d5476a46137a747a1d 478 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 28 478 1.2E-158 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PA257_5609 7c5c7fefd7a621d02125bf7df2692ad9 209 Gene3D G3DSA:3.40.1540.10 1 209 1.5E-85 T 12-10-2018 IPR037074 Protein of unknown function DUF1780, putative endonuclease superfamily PA257_5609 7c5c7fefd7a621d02125bf7df2692ad9 209 SUPERFAMILY SSF52980 1 209 1.34E-126 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PA257_5609 7c5c7fefd7a621d02125bf7df2692ad9 209 Pfam PF08682 Putative endonuclease, protein of unknown function (DUF1780) 2 209 3.0E-131 T 12-10-2018 IPR014796 Protein of unknown function DUF1780, putative endonuclease PA257_6902 363cf9e9e8db0b7bd8c39d5bff3350d4 262 Pfam PF00950 ABC 3 transport family 2 256 2.3E-78 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PA257_6902 363cf9e9e8db0b7bd8c39d5bff3350d4 262 SUPERFAMILY SSF81345 3 253 7.72E-40 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_6902 363cf9e9e8db0b7bd8c39d5bff3350d4 262 Gene3D G3DSA:1.10.3470.10 5 261 3.3E-8 T 12-10-2018 IPR037294 ABC transporter, BtuC-like PA257_4756 7dcd18ebdcce8dc737b6940d7409422f 132 Pfam PF04343 Protein of unknown function, DUF488 4 111 7.8E-30 T 12-10-2018 IPR007438 Protein of unknown function DUF488 PA257_5709 c9a580bc87e521753743efb39310ab0d 503 Pfam PF07916 TraG-like protein, N-terminal region 10 485 1.3E-87 T 12-10-2018 IPR012931 TraG-like, N-terminal PA257_6014 b4fd8249617e8319bc703310a2b8b139 389 SMART SM00382 147 303 3.6E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6014 b4fd8249617e8319bc703310a2b8b139 389 SUPERFAMILY SSF52540 134 379 5.2E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6014 b4fd8249617e8319bc703310a2b8b139 389 Pfam PF13401 AAA domain 146 284 1.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_6014 b4fd8249617e8319bc703310a2b8b139 389 Gene3D G3DSA:3.40.50.300 133 299 1.1E-8 T 12-10-2018 PA257_5816 9ed8377f253996b1de72bdbf66fa0161 273 Pfam PF01435 Peptidase family M48 74 257 6.1E-40 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PA257_1850 6f0652a3ca36bead9fbfe90013f02f4a 456 Pfam PF07044 Protein of unknown function (DUF1329) 84 451 8.9E-153 T 12-10-2018 IPR010752 Protein of unknown function DUF1329 PA257_2315 90d39231c4f402901fcc5192bf567770 199 Pfam PF07238 PilZ domain 78 174 1.6E-11 T 12-10-2018 IPR009875 PilZ domain GO:0035438 PA257_2695 9afd8674eb2d439a13399bf12e7042fe 129 Pfam PF16931 Putative phage holin 1 111 6.3E-26 T 12-10-2018 IPR032637 Putative phage holin-like PA257_4193 80eec4c524e776743b9894df23544953 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 5.5E-164 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PA257_4193 80eec4c524e776743b9894df23544953 437 Pfam PF05525 Branched-chain amino acid transport protein 8 427 7.0E-160 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PA257_6231 bcc042d94cc19af157b7beccd8ea867a 155 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 11 130 2.3E-39 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PA257_6231 bcc042d94cc19af157b7beccd8ea867a 155 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 138 7.4E-47 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PA257_6231 bcc042d94cc19af157b7beccd8ea867a 155 SUPERFAMILY SSF52540 29 128 7.45E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6231 bcc042d94cc19af157b7beccd8ea867a 155 Gene3D G3DSA:3.40.50.300 2 152 7.8E-43 T 12-10-2018 PA257_1637 45d59cde1b7a3cb14198a97a0741183f 176 Pfam PF09684 Phage tail protein (Tail_P2_I) 4 139 3.0E-47 T 12-10-2018 IPR006521 Tail protein I PA257_1637 45d59cde1b7a3cb14198a97a0741183f 176 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 4 140 2.5E-54 T 12-10-2018 IPR006521 Tail protein I PA257_6291 04139d21e588bf7e2637eff98dd6e4ac 298 PIRSF PIRSF029703 1 298 1.5E-133 T 12-10-2018 IPR009977 Mig-14 PA257_6291 04139d21e588bf7e2637eff98dd6e4ac 298 SUPERFAMILY SSF55729 138 290 1.32E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_6291 04139d21e588bf7e2637eff98dd6e4ac 298 Pfam PF07395 Mig-14 35 298 4.2E-142 T 12-10-2018 IPR009977 Mig-14 PA257_3586 9dd31f8ca30d93c49f980170c18de9f9 95 Pfam PF10711 Hypothetical protein (DUF2513) 2 84 2.5E-17 T 12-10-2018 IPR019650 Protein of unknown function DUF2513 PA257_3220 80fa8189f1466a31d8398baeea96bb29 467 Gene3D G3DSA:2.40.160.10 51 466 6.7E-129 T 12-10-2018 IPR023614 Porin domain superfamily PA257_3220 80fa8189f1466a31d8398baeea96bb29 467 Pfam PF03573 outer membrane porin, OprD family 47 465 2.5E-135 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_4880 023ce92062011a2eb9d550f7e1879644 360 Pfam PF03573 outer membrane porin, OprD family 1 359 1.5E-139 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_4880 023ce92062011a2eb9d550f7e1879644 360 Gene3D G3DSA:2.40.160.10 1 359 7.8E-154 T 12-10-2018 IPR023614 Porin domain superfamily PA257_6456 e01a00d3843eafe5ae09bfc35d73b596 400 Gene3D G3DSA:2.40.30.170 232 352 3.8E-35 T 12-10-2018 PA257_6456 e01a00d3843eafe5ae09bfc35d73b596 400 Gene3D G3DSA:1.10.287.470 123 219 2.9E-7 T 12-10-2018 PA257_6456 e01a00d3843eafe5ae09bfc35d73b596 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 292 5.4E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PA257_6456 e01a00d3843eafe5ae09bfc35d73b596 400 Pfam PF00529 HlyD membrane-fusion protein of T1SS 39 347 6.2E-15 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PA257_6456 e01a00d3843eafe5ae09bfc35d73b596 400 SUPERFAMILY SSF56954 22 212 2.51E-7 T 12-10-2018 PA257_6456 e01a00d3843eafe5ae09bfc35d73b596 400 Gene3D G3DSA:2.40.50.100 61 94 1.2E-9 T 12-10-2018 PA257_6456 e01a00d3843eafe5ae09bfc35d73b596 400 SUPERFAMILY SSF111369 167 268 2.62E-10 T 12-10-2018 PA257_6456 e01a00d3843eafe5ae09bfc35d73b596 400 Gene3D G3DSA:1.10.287.470 95 116 1.2E-9 T 12-10-2018 PA257_1285 56ee0c3dff1fdad7a2861dbe6328a0df 131 Pfam PF08859 DGC domain 13 115 8.2E-31 T 12-10-2018 IPR014958 DGC PA257_1285 56ee0c3dff1fdad7a2861dbe6328a0df 131 PIRSF PIRSF037181 1 130 6.8E-53 T 12-10-2018 IPR014958 DGC PA257_4164 fbce26b7ba5d411704704145eb85de71 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 136 1.4E-35 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PA257_4164 fbce26b7ba5d411704704145eb85de71 145 Pfam PF03061 Thioesterase superfamily 51 126 6.2E-14 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PA257_4164 fbce26b7ba5d411704704145eb85de71 145 SUPERFAMILY SSF54637 13 139 1.08E-30 T 12-10-2018 IPR029069 HotDog domain superfamily PA257_4164 fbce26b7ba5d411704704145eb85de71 145 Gene3D G3DSA:3.10.129.10 1 144 4.3E-61 T 12-10-2018 PA257_5776 d40fdd2e8e94609304958a3f6b30ad60 172 SUPERFAMILY SSF48498 63 141 5.76E-9 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PA257_5776 d40fdd2e8e94609304958a3f6b30ad60 172 SUPERFAMILY SSF46689 6 62 1.33E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_5776 d40fdd2e8e94609304958a3f6b30ad60 172 Gene3D G3DSA:1.10.357.10 1 166 1.3E-21 T 12-10-2018 PA257_0140 788c52c510dd00b4336f21443ec1389f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0140 788c52c510dd00b4336f21443ec1389f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0140 788c52c510dd00b4336f21443ec1389f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0140 788c52c510dd00b4336f21443ec1389f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0140 788c52c510dd00b4336f21443ec1389f 242 Pfam PF00106 short chain dehydrogenase 5 194 3.5E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PA257_0140 788c52c510dd00b4336f21443ec1389f 242 SUPERFAMILY SSF51735 4 228 1.76E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily PA257_0140 788c52c510dd00b4336f21443ec1389f 242 Gene3D G3DSA:3.40.50.720 1 241 4.6E-53 T 12-10-2018 PA257_5275 949a231819721844ee2e76b7bd9edd47 76 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 1 61 1.1E-5 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PA257_6726 b1012ff6ae3c1aea9a1c41d177c320a3 206 Pfam PF01810 LysE type translocator 15 203 3.9E-19 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_6093 ed3364ff1cb3f49abc0f193d285cbe2b 120 Pfam PF04138 GtrA-like protein 5 119 2.6E-23 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 PA257_2304 f551b894c429a06a24b472ecaa9af635 445 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 445 46.078 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PA257_2304 f551b894c429a06a24b472ecaa9af635 445 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 255 8.7E-112 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PA257_2304 f551b894c429a06a24b472ecaa9af635 445 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 445 3.1E-204 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PA257_2304 f551b894c429a06a24b472ecaa9af635 445 Pfam PF11973 NQRA C-terminal domain 260 309 1.1E-21 T 12-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 PA257_5788 9f980f1efc36de66b5490c66a7dfd718 168 Pfam PF11220 Protein of unknown function (DUF3015) 24 163 3.7E-54 T 12-10-2018 IPR021383 Protein of unknown function DUF3015 PA257_3335 fe4de2ac014d02ede396b424edff1cc6 340 Gene3D G3DSA:3.40.190.10 30 132 3.0E-9 T 12-10-2018 PA257_3335 fe4de2ac014d02ede396b424edff1cc6 340 Gene3D G3DSA:3.40.190.10 146 326 1.7E-17 T 12-10-2018 PA257_3335 fe4de2ac014d02ede396b424edff1cc6 340 SUPERFAMILY SSF53850 35 271 2.72E-30 T 12-10-2018 PA257_3335 fe4de2ac014d02ede396b424edff1cc6 340 Pfam PF13379 NMT1-like family 33 273 7.3E-24 T 12-10-2018 PA257_6899 47d4150977787b3ae9eddc133c3bfee7 307 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 297 1.1E-51 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PA257_6899 47d4150977787b3ae9eddc133c3bfee7 307 SUPERFAMILY SSF53807 25 304 5.89E-69 T 12-10-2018 PA257_6899 47d4150977787b3ae9eddc133c3bfee7 307 Gene3D G3DSA:3.40.50.1980 27 193 5.9E-49 T 12-10-2018 PA257_6899 47d4150977787b3ae9eddc133c3bfee7 307 Gene3D G3DSA:3.40.50.1980 195 306 6.0E-33 T 12-10-2018 PA257_5631 8446597369c63220c6c813a3cbd7e51d 338 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 326 4.1E-84 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 PA257_1418 825b3734645988142fdc1bd01e05874e 94 Pfam PF12728 Helix-turn-helix domain 22 72 2.0E-10 T 12-10-2018 PA257_1418 825b3734645988142fdc1bd01e05874e 94 SUPERFAMILY SSF46955 21 78 1.43E-8 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily PA257_2874 eff8e767fb546a5adc302fbd21f880a3 262 Pfam PF01061 ABC-2 type transporter 12 223 2.0E-31 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PA257_2874 eff8e767fb546a5adc302fbd21f880a3 262 PIRSF PIRSF006648 2 255 4.8E-15 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_2874 eff8e767fb546a5adc302fbd21f880a3 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 32 53 5.1E-8 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_2874 eff8e767fb546a5adc302fbd21f880a3 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 180 199 5.1E-8 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_2874 eff8e767fb546a5adc302fbd21f880a3 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 200 219 5.1E-8 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PA257_5821 2bd77a9dc087ef1465d951c1eb571c0e 60 PIRSF PIRSF037225 1 60 6.2E-26 T 12-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 PA257_5821 2bd77a9dc087ef1465d951c1eb571c0e 60 Pfam PF14255 Cysteine-rich CPXCG 7 56 7.5E-24 T 12-10-2018 IPR025990 Cysteine-rich CPXCG protein PA257_6063 3ca6f5319cd0dd51e101db06beda7d5a 206 Pfam PF13590 Domain of unknown function (DUF4136) 56 205 9.7E-19 T 12-10-2018 IPR025411 Domain of unknown function DUF4136 PA257_6063 3ca6f5319cd0dd51e101db06beda7d5a 206 Gene3D G3DSA:3.30.160.670 50 204 3.2E-19 T 12-10-2018 PA257_1037 e1d819a696d997f590756d448ec49f71 169 Gene3D G3DSA:3.40.630.30 1 145 1.4E-19 T 12-10-2018 PA257_1037 e1d819a696d997f590756d448ec49f71 169 Pfam PF00583 Acetyltransferase (GNAT) family 43 128 9.4E-13 T 12-10-2018 IPR000182 GNAT domain PA257_1037 e1d819a696d997f590756d448ec49f71 169 SUPERFAMILY SSF55729 2 144 2.87E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_0221 0471a1b6fa47660f19b782c2bdf6ee11 299 Gene3D G3DSA:3.60.130.10 8 299 1.2E-74 T 12-10-2018 PA257_0221 0471a1b6fa47660f19b782c2bdf6ee11 299 SUPERFAMILY SSF51197 19 293 5.95E-70 T 12-10-2018 PA257_0221 0471a1b6fa47660f19b782c2bdf6ee11 299 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 20 291 9.1E-55 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 PA257_3150 11c96da7b2b6ab599443be0f04d8b388 528 Pfam PF06074 Protein of unknown function (DUF935) 4 521 1.9E-190 T 12-10-2018 IPR009279 Protein of unknown function DUF935 PA257_0505 11c96da7b2b6ab599443be0f04d8b388 528 Pfam PF06074 Protein of unknown function (DUF935) 4 521 1.9E-190 T 12-10-2018 IPR009279 Protein of unknown function DUF935 PA257_6956 68235583c39f3d1924385eae27cd8177 169 Gene3D G3DSA:2.70.70.10 24 159 4.5E-28 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_6956 68235583c39f3d1924385eae27cd8177 169 SUPERFAMILY SSF51261 23 138 1.1E-26 T 12-10-2018 IPR011055 Duplicated hybrid motif PA257_6956 68235583c39f3d1924385eae27cd8177 169 Pfam PF01551 Peptidase family M23 50 137 3.0E-19 T 12-10-2018 IPR016047 Peptidase M23 PA257_1256 9ad59a1e9a25a334d7f6446926a2cc0c 208 Pfam PF15648 Restriction endonuclease fold toxin 5 63 150 6.9E-22 T 12-10-2018 IPR028904 Tox-REase-5 domain PA257_0552 a3454de8683cd2c4aca8615b3b52a129 203 Pfam PF01810 LysE type translocator 14 199 3.8E-51 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_1391 3cc745ad65e6bbc9487e6024ae55b49a 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 145 3.9E-24 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PA257_5051 24a4e014202bfc9ab8bfe7d40d6e40aa 176 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 24 113 3.8E-23 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family PA257_5051 24a4e014202bfc9ab8bfe7d40d6e40aa 176 Pfam PF10549 ORF11CD3 domain 127 173 2.9E-12 T 12-10-2018 IPR018877 Bacteriophage P22, Orf201, C-terminal PA257_5051 24a4e014202bfc9ab8bfe7d40d6e40aa 176 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 15 119 5.0E-27 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family PA257_4532 c5182b92e811f4e414f0a6b604a7ff74 78 SUPERFAMILY SSF54292 1 77 1.57E-15 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PA257_4532 c5182b92e811f4e414f0a6b604a7ff74 78 Gene3D G3DSA:3.10.20.440 1 78 1.9E-7 T 12-10-2018 PA257_4532 c5182b92e811f4e414f0a6b604a7ff74 78 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 77 6.2E-17 T 12-10-2018 PA257_0242 0f6435f324f87d39f8c1c80e3df3b0d6 254 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 1 254 3.9E-111 T 12-10-2018 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 PA257_0242 0f6435f324f87d39f8c1c80e3df3b0d6 254 Pfam PF03818 Malonate/sodium symporter MadM subunit 3 61 5.0E-26 T 12-10-2018 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal PA257_1171 be05d0e113a0a0bb648619241225e282 340 SUPERFAMILY SSF52540 112 293 2.52E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_1171 be05d0e113a0a0bb648619241225e282 340 Pfam PF02562 PhoH-like protein 113 316 7.1E-95 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 PA257_1171 be05d0e113a0a0bb648619241225e282 340 Gene3D G3DSA:3.40.50.300 109 316 2.2E-74 T 12-10-2018 PA257_3653 0a3cf275ed1d427590558a8675967e7c 468 PIRSF PIRSF006060 9 467 7.9E-65 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PA257_3653 0a3cf275ed1d427590558a8675967e7c 468 Pfam PF00324 Amino acid permease 26 433 1.5E-87 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PA257_3653 0a3cf275ed1d427590558a8675967e7c 468 Gene3D G3DSA:1.20.1740.10 17 461 5.6E-54 T 12-10-2018 PA257_1626 dd273a7b44b1c0c3ede920fd615e8d58 406 Gene3D G3DSA:3.90.226.10 56 263 1.5E-29 T 12-10-2018 PA257_1626 dd273a7b44b1c0c3ede920fd615e8d58 406 Gene3D G3DSA:3.40.1750.20 163 225 1.5E-29 T 12-10-2018 PA257_1626 dd273a7b44b1c0c3ede920fd615e8d58 406 Pfam PF01343 Peptidase family S49 124 268 1.3E-16 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PA257_1626 dd273a7b44b1c0c3ede920fd615e8d58 406 SUPERFAMILY SSF52096 49 257 1.79E-26 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PA257_1977 19101257eb6f8c246678c1212fe5e378 391 SUPERFAMILY SSF103473 5 372 1.31E-59 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_1977 19101257eb6f8c246678c1212fe5e378 391 Pfam PF07690 Major Facilitator Superfamily 8 317 2.4E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_1977 19101257eb6f8c246678c1212fe5e378 391 Gene3D G3DSA:1.20.1250.20 3 374 2.3E-52 T 12-10-2018 PA257_1386 1ff7b3e8c5cb0c942cc2d2862f7d2b5d 190 TIGRFAM TIGR04061 AZL_007950_fam: AZL_007950 family protein 18 183 1.7E-70 T 12-10-2018 IPR023973 Conserved hypothetical protein CHP04061, AZL007950 PA257_5888 52e89b20a123d101f0e9ee21ca377ebe 231 Gene3D G3DSA:1.10.10.2250 9 69 2.2E-5 T 12-10-2018 PA257_1839 ad1fd0cd594759a79383270f16b315c4 129 Pfam PF03788 LrgA family 23 115 1.2E-24 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 PA257_5535 d82dfeaab38ebf46de7be4b46eef7082 310 Pfam PF02535 ZIP Zinc transporter 165 305 3.1E-16 T 12-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PA257_4798 17642ac26bc469cc1f3ed0248ccee958 432 Gene3D G3DSA:2.40.160.10 34 432 3.4E-182 T 12-10-2018 IPR023614 Porin domain superfamily PA257_4798 17642ac26bc469cc1f3ed0248ccee958 432 Pfam PF03573 outer membrane porin, OprD family 39 430 5.5E-158 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_4763 da1d35e4cf272d78f085bc10d57d0136 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 82 1.2E-21 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PA257_4763 da1d35e4cf272d78f085bc10d57d0136 89 PIRSF PIRSF028784 1 89 2.5E-28 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PA257_0989 14fe87d092502aeae59ec364b979ec93 1210 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 431 496 1.8E-11 T 12-10-2018 IPR013491 Caudovirus, tape measure, N-terminal PA257_2359 56b55bec8c6ef66ef550e88b21e69f93 142 Pfam PF01890 Cobalamin synthesis G C-terminus 9 133 3.0E-27 T 12-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PA257_2359 56b55bec8c6ef66ef550e88b21e69f93 142 Gene3D G3DSA:3.30.420.180 1 142 4.0E-52 T 12-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 PA257_2359 56b55bec8c6ef66ef550e88b21e69f93 142 SUPERFAMILY SSF159664 4 134 9.94E-36 T 12-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 PA257_0770 76c92215c9e803ade6276755d7bfbcda 136 Pfam PF09684 Phage tail protein (Tail_P2_I) 1 100 9.2E-33 T 12-10-2018 IPR006521 Tail protein I PA257_0770 76c92215c9e803ade6276755d7bfbcda 136 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 1 101 1.3E-38 T 12-10-2018 IPR006521 Tail protein I PA257_3502 62552b04bbe8af343a01f10032d3ee4b 107 Pfam PF04341 Protein of unknown function, DUF485 11 98 1.6E-25 T 12-10-2018 IPR007436 Protein of unknown function DUF485 PA257_2583 e229aec05b14aa8f8360b807c386ce8a 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 6.0E-28 T 12-10-2018 IPR007746 Broad mercury transporter MerE GO:0015097|GO:0015694|GO:0016020 PA257_2583 e229aec05b14aa8f8360b807c386ce8a 78 Pfam PF05052 MerE protein 1 75 1.5E-48 T 12-10-2018 IPR007746 Broad mercury transporter MerE GO:0015097|GO:0015694|GO:0016020 PA257_4471 d32539a9b1a8f230dc3439ec131b5319 170 SUPERFAMILY SSF117074 12 169 1.7E-35 T 12-10-2018 PA257_4471 d32539a9b1a8f230dc3439ec131b5319 170 Gene3D G3DSA:2.60.40.10 63 167 3.4E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_2322 d0585b42beea8db0c7c5b16edf4b406b 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 138 1.6E-26 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 PA257_2322 d0585b42beea8db0c7c5b16edf4b406b 146 Gene3D G3DSA:3.30.420.270 65 135 3.3E-5 T 12-10-2018 PA257_1604 d42681d3b14dd697832e41f2c03884c6 419 Gene3D G3DSA:1.10.443.10 201 407 2.1E-33 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PA257_1604 d42681d3b14dd697832e41f2c03884c6 419 SUPERFAMILY SSF56349 96 397 2.56E-45 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PA257_1604 d42681d3b14dd697832e41f2c03884c6 419 Pfam PF12167 Arm DNA-binding domain 19 81 7.5E-24 T 12-10-2018 IPR022000 Min27-like integrase, DNA-binding domain PA257_1604 d42681d3b14dd697832e41f2c03884c6 419 Pfam PF00589 Phage integrase family 200 392 6.3E-18 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PA257_5677 7863c1a0b3ce197532939974da15d667 198 Gene3D G3DSA:3.40.50.410 30 183 5.1E-10 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_5677 7863c1a0b3ce197532939974da15d667 198 SUPERFAMILY SSF53300 40 172 5.93E-13 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PA257_1186 8f6d47d06d031b22c6f834db18ef880e 189 SUPERFAMILY SSF55120 11 184 2.56E-44 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_1186 8f6d47d06d031b22c6f834db18ef880e 189 Gene3D G3DSA:3.30.70.1560 75 174 1.1E-42 T 12-10-2018 PA257_1186 8f6d47d06d031b22c6f834db18ef880e 189 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 15 184 4.4E-59 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PA257_1186 8f6d47d06d031b22c6f834db18ef880e 189 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 46 60 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PA257_1186 8f6d47d06d031b22c6f834db18ef880e 189 Pfam PF00849 RNA pseudouridylate synthase 11 155 3.9E-16 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PA257_1186 8f6d47d06d031b22c6f834db18ef880e 189 Gene3D G3DSA:3.30.70.580 2 74 2.7E-29 T 12-10-2018 PA257_6414 b9825929f308ed0912a5c8af713508b6 173 Pfam PF13511 Domain of unknown function (DUF4124) 7 57 5.8E-15 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 PA257_3895 fd56d4fd9ff6e6a9b36fc390f86ec5bc 484 Pfam PF02386 Cation transport protein 55 477 1.5E-50 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PA257_3895 fd56d4fd9ff6e6a9b36fc390f86ec5bc 484 PIRSF PIRSF006247 1 484 1.6E-165 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 PA257_2608 12375d85762802398b4b9496cb833f60 253 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 253 1.0E-99 T 12-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type PA257_2608 12375d85762802398b4b9496cb833f60 253 Pfam PF14348 Domain of unknown function (DUF4400) 51 250 2.7E-75 T 12-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type PA257_0713 2a7f4aeb317dc1215bbf1ff3d314c4a5 115 Gene3D G3DSA:3.40.1580.10 2 111 6.9E-15 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily PA257_0713 2a7f4aeb317dc1215bbf1ff3d314c4a5 115 SUPERFAMILY SSF160631 4 108 3.01E-10 T 12-10-2018 PA257_4658 159fb4d467b4180dd516b4b486a2d857 122 Pfam PF09961 Uncharacterized protein conserved in bacteria (DUF2195) 6 120 1.8E-33 T 12-10-2018 IPR018696 Protein of unknown function DUF2195 PA257_5390 58167258ed09642e55c15e5d34c2d1a6 125 Gene3D G3DSA:1.25.40.10 17 119 2.2E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_6154 e4653b518844416529f3665cff0f5ddb 114 Pfam PF04355 SmpA / OmlA family 31 97 4.0E-14 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PA257_6154 e4653b518844416529f3665cff0f5ddb 114 Gene3D G3DSA:3.30.1450.10 18 114 1.2E-44 T 12-10-2018 IPR037873 BamE-like PA257_4641 4bad9da6d64ba7e933ccc6a38ba45b64 262 Pfam PF01738 Dienelactone hydrolase family 46 258 7.8E-46 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 PA257_4641 4bad9da6d64ba7e933ccc6a38ba45b64 262 SUPERFAMILY SSF53474 21 258 1.35E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_4641 4bad9da6d64ba7e933ccc6a38ba45b64 262 Gene3D G3DSA:3.40.50.1820 10 260 3.1E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1992 bfc816157b8dc6312cfefad9b5a1bf45 882 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 65 254 5.5E-9 T 12-10-2018 IPR018712 Domain of unknown function DUF2235 PA257_1992 bfc816157b8dc6312cfefad9b5a1bf45 882 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 268 411 1.3E-16 T 12-10-2018 IPR018712 Domain of unknown function DUF2235 PA257_2712 67419892d453c639a571ae7013502e4f 137 Pfam PF08748 Phage tail assembly chaperone 1 126 6.6E-42 T 12-10-2018 IPR014859 Phage tail assembly chaperone PA257_3069 22e885bd87c36e9d6da8485e406439d0 205 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 34 96 1.3E-6 T 12-10-2018 IPR018756 Domain of unknown function DUF2314 PA257_3069 22e885bd87c36e9d6da8485e406439d0 205 Pfam PF09951 Protein of unknown function (DUF2185) 115 198 3.3E-31 T 12-10-2018 IPR018689 Domain of unknown function DUF2185 PA257_3595 2eebbeef8b4c623c93a9e30248787b99 149 Gene3D G3DSA:3.30.240.20 77 148 4.5E-16 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily PA257_3595 2eebbeef8b4c623c93a9e30248787b99 149 Pfam PF04239 Protein of unknown function (DUF421) 85 146 1.4E-10 T 12-10-2018 IPR007353 Protein of unknown function DUF421 PA257_5683 49b7d2cdb0c66992dd3811f385ccc008 193 SUPERFAMILY SSF53955 29 183 1.1E-9 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_2828 79a866430f55e118fda76b92ea5723ca 228 Pfam PF01965 DJ-1/PfpI family 28 224 5.6E-14 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PA257_2828 79a866430f55e118fda76b92ea5723ca 228 Gene3D G3DSA:3.40.50.880 2 227 4.4E-67 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_2828 79a866430f55e118fda76b92ea5723ca 228 SUPERFAMILY SSF52317 1 227 2.2E-68 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like PA257_5420 fa33003cd96a8acebeaa6a9e92dd1b91 350 Gene3D G3DSA:3.20.20.70 1 350 5.1E-139 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PA257_5420 fa33003cd96a8acebeaa6a9e92dd1b91 350 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 6.3E-85 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PA257_5420 fa33003cd96a8acebeaa6a9e92dd1b91 350 SUPERFAMILY SSF51395 1 349 4.64E-122 T 12-10-2018 PA257_2566 b4f3617d553ebbe7c1cb9cea053b7b54 156 Gene3D G3DSA:3.40.30.10 1 154 1.5E-21 T 12-10-2018 PA257_2566 b4f3617d553ebbe7c1cb9cea053b7b54 156 SUPERFAMILY SSF52833 7 153 2.7E-11 T 12-10-2018 IPR036249 Thioredoxin-like superfamily PA257_0769 905ea0182c5d792e0688992c17f47d86 295 PIRSF PIRSF020481 1 295 1.9E-130 T 12-10-2018 IPR014507 Baseplate assembly protein J, predicted PA257_0769 905ea0182c5d792e0688992c17f47d86 295 Pfam PF04865 Baseplate J-like protein 111 252 1.8E-23 T 12-10-2018 IPR006949 Baseplate protein J-like PA257_1616 2d788ca9a1cad49ec6af18fbd50a43c9 84 Gene3D G3DSA:1.10.260.40 9 82 2.4E-18 T 12-10-2018 PA257_1616 2d788ca9a1cad49ec6af18fbd50a43c9 84 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 12 76 1.0E-11 T 12-10-2018 IPR031856 Putative bacterial antitoxin YdaS PA257_0718 abe89f6ef41d7d9acb49b1d18cff512e 111 Pfam PF08378 Nuclease-related domain 33 90 1.0E-9 T 12-10-2018 IPR011528 Nuclease-related domain, NERD PA257_3706 3b324d788cb05ce94eee2133c77f55f3 84 Pfam PF06568 Domain of unknown function (DUF1127) 30 66 2.8E-7 T 12-10-2018 IPR009506 Protein of unknown function DUF1127 PA257_4089 9a7c0f5e4f7e4815e34c3ab978d3fd8c 63 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 56 6.2E-12 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal PA257_5157 8e4f0251b779aeb0feec4adbb4d9598e 156 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 12 147 2.7E-18 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 PA257_6031 e2f40bbcb475ef61a69ee2020b7965d1 191 Pfam PF11985 Protein of unknown function (DUF3486) 1 189 1.0E-38 T 12-10-2018 IPR021874 Bacteriophage Mu, Gp27 PA257_1836 92453fe0232fdf6b96d7fc766f493368 185 SUPERFAMILY SSF54909 3 103 8.94E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel PA257_3008 cf824ca01cc5e5cc6d6b1754b1d7d7cc 180 Pfam PF16304 Domain of unknown function (DUF4946) 26 179 6.6E-65 T 12-10-2018 IPR032543 Protein of unknown function DUF4946 PA257_0123 37c7230d239ee4608b3e85ea7f790b9e 410 TIGRFAM TIGR02270 TIGR02270: conserved hypothetical protein 3 408 2.9E-172 T 12-10-2018 IPR011959 Conserved hypothetical protein CHP02270 PA257_0123 37c7230d239ee4608b3e85ea7f790b9e 410 Pfam PF13646 HEAT repeats 149 217 1.7E-7 T 12-10-2018 PA257_0123 37c7230d239ee4608b3e85ea7f790b9e 410 Gene3D G3DSA:1.25.10.10 99 224 8.9E-9 T 12-10-2018 IPR011989 Armadillo-like helical PA257_0123 37c7230d239ee4608b3e85ea7f790b9e 410 SUPERFAMILY SSF48371 97 310 1.19E-10 T 12-10-2018 IPR016024 Armadillo-type fold PA257_4899 acf5976429b3d202e52570d433c2aa8a 84 Gene3D G3DSA:3.10.510.10 1 84 3.7E-29 T 12-10-2018 IPR023122 NE1680-like superfamily PA257_4899 acf5976429b3d202e52570d433c2aa8a 84 Pfam PF09630 Domain of unknown function (DUF2024) 1 80 6.7E-30 T 12-10-2018 IPR018592 Protein of unknown function DUF2024 PA257_4899 acf5976429b3d202e52570d433c2aa8a 84 SUPERFAMILY SSF160766 1 84 2.48E-32 T 12-10-2018 IPR023122 NE1680-like superfamily PA257_0212 7265a7b9ea92be674bb3780f357975e2 538 SUPERFAMILY SSF161098 338 524 5.76E-24 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0212 7265a7b9ea92be674bb3780f357975e2 538 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 271 1.3E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0212 7265a7b9ea92be674bb3780f357975e2 538 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 362 528 1.7E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PA257_0212 7265a7b9ea92be674bb3780f357975e2 538 SUPERFAMILY SSF161098 78 263 7.85E-25 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0212 7265a7b9ea92be674bb3780f357975e2 538 Gene3D G3DSA:1.10.3720.10 340 534 1.8E-21 T 12-10-2018 IPR035906 MetI-like superfamily PA257_0212 7265a7b9ea92be674bb3780f357975e2 538 Gene3D G3DSA:1.10.3720.10 73 270 3.3E-17 T 12-10-2018 IPR035906 MetI-like superfamily PA257_5140 3b73443cd4ef0f2df389d04401feaaa2 116 Pfam PF16137 Domain of unknown function (DUF4845) 22 107 9.3E-24 T 12-10-2018 IPR032314 Protein of unknown function DUF4845 PA257_6546 addba164ef90f94593049b4c45bde665 267 Gene3D G3DSA:1.20.144.10 12 238 4.3E-7 T 12-10-2018 PA257_6546 addba164ef90f94593049b4c45bde665 267 Pfam PF01569 PAP2 superfamily 146 225 5.3E-13 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PA257_6546 addba164ef90f94593049b4c45bde665 267 SUPERFAMILY SSF48317 16 228 3.14E-11 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PA257_4841 1bb5879fd9d93f46c0dfe318816e8172 279 Pfam PF03050 Transposase IS66 family 1 270 2.5E-100 T 12-10-2018 IPR004291 Transposase, IS66 PA257_2397 3ed7131dc530b5887ff7aff90af110d5 323 Gene3D G3DSA:3.40.50.1980 148 318 6.1E-60 T 12-10-2018 PA257_2397 3ed7131dc530b5887ff7aff90af110d5 323 Pfam PF01497 Periplasmic binding protein 54 295 1.8E-23 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain PA257_2397 3ed7131dc530b5887ff7aff90af110d5 323 SUPERFAMILY SSF53807 43 318 1.73E-45 T 12-10-2018 PA257_2397 3ed7131dc530b5887ff7aff90af110d5 323 Gene3D G3DSA:3.40.50.1980 22 145 7.3E-20 T 12-10-2018 PA257_2959 4b557ec498663f27e4dbb8110c4aaf81 360 Pfam PF00296 Luciferase-like monooxygenase 21 322 1.5E-76 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PA257_2959 4b557ec498663f27e4dbb8110c4aaf81 360 Gene3D G3DSA:3.20.20.30 9 359 4.7E-103 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_2959 4b557ec498663f27e4dbb8110c4aaf81 360 SUPERFAMILY SSF51679 12 350 2.62E-80 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PA257_1008 47212a1f0b2ead99b7ba60047196c8f7 209 SUPERFAMILY SSF53955 36 201 5.34E-35 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_1008 47212a1f0b2ead99b7ba60047196c8f7 209 Pfam PF01464 Transglycosylase SLT domain 47 154 5.6E-14 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 PA257_1008 47212a1f0b2ead99b7ba60047196c8f7 209 Gene3D G3DSA:1.10.530.10 19 192 2.9E-33 T 12-10-2018 PA257_1438 937fa727673a9321683af899317ac728 130 Pfam PF04956 TrbC/VIRB2 family 33 120 1.6E-24 T 12-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 PA257_6110 f6794d11cc740b744c20330d707ee00b 263 SUPERFAMILY SSF53335 111 220 1.13E-9 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PA257_6110 f6794d11cc740b744c20330d707ee00b 263 Pfam PF03059 Nicotianamine synthase protein 118 246 7.2E-12 T 12-10-2018 IPR004298 Nicotianamine synthase GO:0030410|GO:0030418 MetaCyc: PWY-5912|MetaCyc: PWY-5957 PA257_6110 f6794d11cc740b744c20330d707ee00b 263 Gene3D G3DSA:3.40.50.150 31 258 5.7E-33 T 12-10-2018 PA257_3596 ad7111ffab90b1f768910fdaeb0a1c61 454 Pfam PF00999 Sodium/hydrogen exchanger family 338 442 1.3E-6 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PA257_3596 ad7111ffab90b1f768910fdaeb0a1c61 454 Pfam PF00999 Sodium/hydrogen exchanger family 11 276 2.2E-26 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PA257_4062 df900cdeca1939e87bac8e5e8bf228ff 137 Gene3D G3DSA:2.60.40.2990 13 137 3.2E-55 T 12-10-2018 PA257_4062 df900cdeca1939e87bac8e5e8bf228ff 137 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 21 108 1.5E-10 T 12-10-2018 IPR039366 YscW/ExsB PA257_4062 df900cdeca1939e87bac8e5e8bf228ff 137 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 2 125 1.1E-50 T 12-10-2018 IPR013400 Type III secretion system chaperone, YscW PA257_4811 0daad49bcccfe757114ed145fd6a8d19 299 SUPERFAMILY SSF53448 3 221 5.47E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4811 0daad49bcccfe757114ed145fd6a8d19 299 Gene3D G3DSA:3.90.550.10 1 250 1.1E-52 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_4811 0daad49bcccfe757114ed145fd6a8d19 299 Pfam PF00535 Glycosyl transferase family 2 6 124 8.0E-25 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_2227 cedf2e5eb1a9707e8ced2c7a0dd8ccf4 543 Pfam PF13584 Oxygen tolerance 13 460 1.3E-108 T 12-10-2018 IPR025738 Aerotolerance-related protein BatD PA257_6792 83c41cbba3fb8e22fe8c772c14b9ca6b 176 Gene3D G3DSA:3.30.1380.20 20 175 3.3E-8 T 12-10-2018 PA257_6792 83c41cbba3fb8e22fe8c772c14b9ca6b 176 SMART SM00989 107 175 3.7E-4 T 12-10-2018 IPR004096 4-vinyl reductase, 4VR PA257_6792 83c41cbba3fb8e22fe8c772c14b9ca6b 176 SUPERFAMILY SSF111126 6 144 2.98E-17 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily PA257_1120 b134aa69193204bf8e5603a8619f9980 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 PA257_1120 b134aa69193204bf8e5603a8619f9980 175 SUPERFAMILY SSF50324 3 174 2.09E-68 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 PA257_1120 b134aa69193204bf8e5603a8619f9980 175 Gene3D G3DSA:3.90.80.10 1 175 2.9E-78 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 PA257_1120 b134aa69193204bf8e5603a8619f9980 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.083 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 PA257_1120 b134aa69193204bf8e5603a8619f9980 175 Pfam PF00719 Inorganic pyrophosphatase 18 172 2.5E-54 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 PA257_3291 65015d70a23450ebb40d9fbe831551ee 384 SUPERFAMILY SSF52540 52 179 1.58E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_3291 65015d70a23450ebb40d9fbe831551ee 384 Pfam PF03969 AFG1-like ATPase 316 376 6.4E-14 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 PA257_3291 65015d70a23450ebb40d9fbe831551ee 384 Pfam PF03969 AFG1-like ATPase 11 293 2.8E-82 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 PA257_3291 65015d70a23450ebb40d9fbe831551ee 384 Gene3D G3DSA:3.40.50.300 18 185 4.6E-18 T 12-10-2018 PA257_0009 b4da6f389fad7c013c24d9822645b24b 110 Gene3D G3DSA:2.30.29.80 1 110 9.5E-41 T 12-10-2018 PA257_0009 b4da6f389fad7c013c24d9822645b24b 110 SUPERFAMILY SSF160113 61 109 5.23E-13 T 12-10-2018 IPR036913 YegP-like superfamily PA257_0009 b4da6f389fad7c013c24d9822645b24b 110 SUPERFAMILY SSF160113 1 55 1.44E-16 T 12-10-2018 IPR036913 YegP-like superfamily PA257_0009 b4da6f389fad7c013c24d9822645b24b 110 Pfam PF07411 Domain of unknown function (DUF1508) 63 108 2.2E-16 T 12-10-2018 IPR010879 Domain of unknown function DUF1508 PA257_0009 b4da6f389fad7c013c24d9822645b24b 110 Pfam PF07411 Domain of unknown function (DUF1508) 12 55 1.0E-18 T 12-10-2018 IPR010879 Domain of unknown function DUF1508 PA257_4815 6a1a6553f05a7de6fbefbe7e53c5fc1b 396 Pfam PF06804 NlpB/DapX lipoprotein 36 374 4.5E-22 T 12-10-2018 IPR010653 NlpB/DapX lipoprotein PA257_4815 6a1a6553f05a7de6fbefbe7e53c5fc1b 396 Gene3D G3DSA:3.30.310.170 249 380 1.9E-5 T 12-10-2018 PA257_1229 0f2253651cc56a3c5aa4a9736319cb7f 56 Pfam PF10617 Protein of unknown function (DUF2474) 16 52 2.5E-18 T 12-10-2018 IPR018895 Protein of unknown function DUF2474 PA257_0265 e3d9ae0ae318b593aee02c5df43df282 271 Pfam PF01261 Xylose isomerase-like TIM barrel 22 221 6.2E-16 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PA257_0265 e3d9ae0ae318b593aee02c5df43df282 271 SUPERFAMILY SSF51658 5 270 2.8E-61 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily PA257_0265 e3d9ae0ae318b593aee02c5df43df282 271 Gene3D G3DSA:3.20.20.150 1 271 6.6E-53 T 12-10-2018 PA257_6123 5e915d5103bf44dc99f8de27070c44cf 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 1.3E-17 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PA257_6123 5e915d5103bf44dc99f8de27070c44cf 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 1.3E-17 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PA257_6123 5e915d5103bf44dc99f8de27070c44cf 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 1.3E-17 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PA257_6123 5e915d5103bf44dc99f8de27070c44cf 156 Pfam PF00364 Biotin-requiring enzyme 82 155 2.3E-25 T 12-10-2018 IPR000089 Biotin/lipoyl attachment PA257_6123 5e915d5103bf44dc99f8de27070c44cf 156 SUPERFAMILY SSF51230 80 155 3.8E-25 T 12-10-2018 IPR011053 Single hybrid motif PA257_6123 5e915d5103bf44dc99f8de27070c44cf 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 1.3E-59 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PA257_6123 5e915d5103bf44dc99f8de27070c44cf 156 Gene3D G3DSA:2.40.50.100 77 155 7.5E-31 T 12-10-2018 PA257_6123 5e915d5103bf44dc99f8de27070c44cf 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PA257_0467 8d05ccb7a1aa0292841ada9d553a56c5 655 SUPERFAMILY SSF52540 44 318 1.38E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0467 8d05ccb7a1aa0292841ada9d553a56c5 655 Pfam PF00350 Dynamin family 59 273 1.7E-12 T 12-10-2018 IPR022812 Dynamin superfamily PA257_5707 a82f25fd7ea6ea7176f483e8731d2a77 460 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 35 448 3.3E-175 T 12-10-2018 IPR021204 Integrating conjugative element protein, PFL4711 PA257_2588 213403fef48ef533da644e72848077b1 60 Pfam PF02411 MerT mercuric transport protein 2 60 1.1E-26 T 12-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 PA257_6485 1ac5bd3b942e0df1390dd7cd9b442546 919 Pfam PF10145 Phage-related minor tail protein 241 434 4.3E-46 T 12-10-2018 IPR010090 Phage tail tape measure protein PA257_6485 1ac5bd3b942e0df1390dd7cd9b442546 919 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 199 544 2.1E-105 T 12-10-2018 IPR010090 Phage tail tape measure protein PA257_3199 0040809226f718b87affa667e92a8386 724 Pfam PF04632 Fusaric acid resistance protein family 19 699 2.0E-152 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 PA257_2795 86c16257453cb7f1c98f45481c39796e 95 Pfam PF12021 Protein of unknown function (DUF3509) 4 87 1.8E-32 T 12-10-2018 IPR021898 Protein of unknown function DUF3509 PA257_6710 031af5448b7f7ae6478632389d8ff7a2 316 Pfam PF13557 Putative MetA-pathway of phenol degradation 76 310 1.7E-57 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative PA257_1698 1e366be7aecaad19b922237fb5127ad7 261 Gene3D G3DSA:3.10.310.10 5 252 2.0E-98 T 12-10-2018 PA257_1698 1e366be7aecaad19b922237fb5127ad7 261 SUPERFAMILY SSF54506 1 260 9.89E-86 T 12-10-2018 PA257_1698 1e366be7aecaad19b922237fb5127ad7 261 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 259 8.0E-42 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_1698 1e366be7aecaad19b922237fb5127ad7 261 Gene3D G3DSA:3.10.310.10 117 248 2.0E-98 T 12-10-2018 PA257_1698 1e366be7aecaad19b922237fb5127ad7 261 PIRSF PIRSF016184 1 260 1.5E-61 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_1698 1e366be7aecaad19b922237fb5127ad7 261 Pfam PF02567 Phenazine biosynthesis-like protein 8 256 3.3E-62 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PA257_4320 85c9b5c9965cd16713abbd5234a559d1 526 Pfam PF02120 Flagellar hook-length control protein FliK 432 512 4.8E-19 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal PA257_0975 7ad0fd59df6317af2474c72fde7315db 307 SUPERFAMILY SSF53213 12 280 5.1E-50 T 12-10-2018 PA257_0975 7ad0fd59df6317af2474c72fde7315db 307 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 280 9.7E-80 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PA257_0975 7ad0fd59df6317af2474c72fde7315db 307 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 282 1.7E-138 T 12-10-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 PA257_0975 7ad0fd59df6317af2474c72fde7315db 307 Gene3D G3DSA:3.40.830.10 1 300 2.0E-80 T 12-10-2018 PA257_1443 a3af0958b4d7c7879802f5871d17df02 455 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 1 305 5.3E-52 T 12-10-2018 IPR014150 Conjugal transfer, TrbL PA257_1443 a3af0958b4d7c7879802f5871d17df02 455 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 256 4.8E-53 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 PA257_1740 661d909e5f84999c3cee509bca4011f9 475 Gene3D G3DSA:1.25.40.10 28 461 7.1E-107 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1740 661d909e5f84999c3cee509bca4011f9 475 SUPERFAMILY SSF81901 256 449 9.59E-19 T 12-10-2018 PA257_1740 661d909e5f84999c3cee509bca4011f9 475 SMART SM00671 310 344 0.018 T 12-10-2018 IPR006597 Sel1-like repeat PA257_1740 661d909e5f84999c3cee509bca4011f9 475 SMART SM00671 62 96 26.0 T 12-10-2018 IPR006597 Sel1-like repeat PA257_1740 661d909e5f84999c3cee509bca4011f9 475 SMART SM00671 381 416 3.3 T 12-10-2018 IPR006597 Sel1-like repeat PA257_1740 661d909e5f84999c3cee509bca4011f9 475 SMART SM00671 345 380 1.7E-4 T 12-10-2018 IPR006597 Sel1-like repeat PA257_5047 e7255f40465b1b2e55e3283d38c98f00 170 Pfam PF03245 Bacteriophage Rz lysis protein 25 145 1.7E-8 T 12-10-2018 IPR004929 Spanin, inner membrane subunit GO:0019076|GO:0019835 PA257_0623 74bd31227d9e8b188a1de4c17a0967dc 147 Gene3D G3DSA:3.40.630.30 3 140 7.6E-36 T 12-10-2018 PA257_0623 74bd31227d9e8b188a1de4c17a0967dc 147 SUPERFAMILY SSF55729 3 145 5.66E-33 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_0623 74bd31227d9e8b188a1de4c17a0967dc 147 Pfam PF00583 Acetyltransferase (GNAT) family 18 134 1.3E-14 T 12-10-2018 IPR000182 GNAT domain PA257_5837 114cbaf54a19599149a4d996e4dea099 262 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 41 156 8.4E-18 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PA257_5837 114cbaf54a19599149a4d996e4dea099 262 Gene3D G3DSA:2.60.40.10 40 157 1.1E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold PA257_5837 114cbaf54a19599149a4d996e4dea099 262 SUPERFAMILY SSF49354 32 161 2.28E-26 T 12-10-2018 IPR008962 PapD-like superfamily PA257_0748 2cf80dfb8fe4cc20c4e2ead50cea199e 353 SUPERFAMILY SSF53474 72 319 2.82E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_0748 2cf80dfb8fe4cc20c4e2ead50cea199e 353 Pfam PF12048 Protein of unknown function (DUF3530) 13 341 4.5E-106 T 12-10-2018 IPR022529 Protein of unknown function DUF3530 PA257_3928 643b04e292522388c5da0d63572274d1 104 Gene3D G3DSA:3.30.1050.10 1 103 2.1E-31 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PA257_3928 643b04e292522388c5da0d63572274d1 104 SUPERFAMILY SSF55718 2 102 3.53E-28 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PA257_3928 643b04e292522388c5da0d63572274d1 104 Pfam PF02036 SCP-2 sterol transfer family 16 102 1.1E-20 T 12-10-2018 IPR003033 SCP2 sterol-binding domain PA257_0914 dcde3e2b406e612c5a12f60b5f58089d 431 Gene3D G3DSA:2.40.160.10 29 431 7.8E-173 T 12-10-2018 IPR023614 Porin domain superfamily PA257_0914 dcde3e2b406e612c5a12f60b5f58089d 431 Pfam PF03573 outer membrane porin, OprD family 32 429 2.8E-143 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_0022 ac37c842519adf835e5b69aab92cc304 88 SUPERFAMILY SSF141371 1 86 4.32E-9 T 12-10-2018 PA257_0022 ac37c842519adf835e5b69aab92cc304 88 Gene3D G3DSA:2.40.10.220 1 87 1.4E-9 T 12-10-2018 PA257_0022 ac37c842519adf835e5b69aab92cc304 88 Pfam PF07238 PilZ domain 4 85 1.6E-9 T 12-10-2018 IPR009875 PilZ domain GO:0035438 PA257_6059 2bf409278229b3150d341ddf99c95b7a 333 SMART SM00342 243 325 6.4E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_6059 2bf409278229b3150d341ddf99c95b7a 333 Pfam PF12833 Helix-turn-helix domain 249 327 1.6E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PA257_6059 2bf409278229b3150d341ddf99c95b7a 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 199 7.7E-41 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PA257_6059 2bf409278229b3150d341ddf99c95b7a 333 SUPERFAMILY SSF46689 278 328 8.51E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_6059 2bf409278229b3150d341ddf99c95b7a 333 Gene3D G3DSA:1.10.10.60 222 331 1.0E-23 T 12-10-2018 PA257_1301 10ef4b18b1eb17ab29a9d032102db253 375 Pfam PF01266 FAD dependent oxidoreductase 5 347 3.0E-45 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PA257_1301 10ef4b18b1eb17ab29a9d032102db253 375 Gene3D G3DSA:3.50.50.60 5 348 2.9E-135 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1301 10ef4b18b1eb17ab29a9d032102db253 375 SUPERFAMILY SSF51905 4 357 1.1E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PA257_1301 10ef4b18b1eb17ab29a9d032102db253 375 Gene3D G3DSA:3.30.9.10 84 308 2.9E-135 T 12-10-2018 PA257_3126 a39180de0fc61946a3b04597dfafea74 735 Pfam PF13550 Putative phage tail protein 203 370 1.8E-12 T 12-10-2018 IPR032876 Tip attachment protein J PA257_0480 a39180de0fc61946a3b04597dfafea74 735 Pfam PF13550 Putative phage tail protein 203 370 1.8E-12 T 12-10-2018 IPR032876 Tip attachment protein J PA257_0288 6083db8d25571b5a6fe2d4f986870990 499 Pfam PF11394 Protein of unknown function (DUF2875) 271 437 2.5E-30 T 12-10-2018 IPR021531 Protein of unknown function DUF2875 PA257_0288 6083db8d25571b5a6fe2d4f986870990 499 Pfam PF11394 Protein of unknown function (DUF2875) 38 259 2.1E-10 T 12-10-2018 IPR021531 Protein of unknown function DUF2875 PA257_3784 c107dc5d0e41e99dfc259683868ae879 191 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 3 181 1.3E-30 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PA257_3784 c107dc5d0e41e99dfc259683868ae879 191 Pfam PF04973 Nicotinamide mononucleotide transporter 3 181 9.5E-56 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PA257_0125 54782929e366da82b02b3fcf89ffa52a 523 Pfam PF00916 Sulfate permease family 16 386 5.9E-63 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PA257_6112 cdfb02c0faa142b65922f7f76a523cef 384 Pfam PF07786 Protein of unknown function (DUF1624) 10 218 4.8E-16 T 12-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 PA257_4655 32a171c087b92ba1085401482bf4b613 184 SMART SM01040 17 131 2.1E-14 T 12-10-2018 IPR003497 BRO N-terminal domain PA257_5560 117f181826e9902f3bbf7813a1fe8db4 589 Pfam PF09909 Uncharacterized protein conserved in bacteria (DUF2138) 31 586 1.7E-252 T 12-10-2018 IPR018671 Protein of unknown function DUF2138 PA257_4192 d5f6e9cdab079d1ad48198b7ce3b050a 254 Pfam PF04654 Protein of unknown function, DUF599 18 228 9.7E-62 T 12-10-2018 IPR006747 Protein of unknown function DUF599 PA257_2143 8b084fa9baafb63b276247a7061ad4af 317 Gene3D G3DSA:3.90.550.10 1 203 1.0E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_2143 8b084fa9baafb63b276247a7061ad4af 317 Pfam PF00535 Glycosyl transferase family 2 4 94 6.1E-18 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PA257_2143 8b084fa9baafb63b276247a7061ad4af 317 SUPERFAMILY SSF53448 4 211 7.78E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PA257_1739 5949a3bdd54a07694265fd00fc5db317 490 Gene3D G3DSA:2.40.160.100 33 490 8.2E-226 T 12-10-2018 PA257_1739 5949a3bdd54a07694265fd00fc5db317 490 Pfam PF13372 Alginate export 39 485 2.7E-117 T 12-10-2018 IPR025388 Alginate export domain PA257_6297 830a0759849f291edd54aa8a1b8997fb 268 PIRSF PIRSF037318 2 266 2.4E-125 T 12-10-2018 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 PA257_6297 830a0759849f291edd54aa8a1b8997fb 268 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 21 231 2.0E-71 T 12-10-2018 PA257_6297 830a0759849f291edd54aa8a1b8997fb 268 SUPERFAMILY SSF56112 35 217 8.56E-12 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_4252 39249ab17edf40bdb467ed305f42b7b7 179 Pfam PF03691 Uncharacterised protein family (UPF0167) 5 178 1.2E-60 T 12-10-2018 IPR005363 Uncharacterised protein family UPF0167 PA257_0161 391542e997b54db9f0d3f8f6c2dfe289 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 282 5.4E-38 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PA257_6091 4ed799225f344885e0864888f3cd151c 478 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 13 240 5.1E-18 T 12-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 PA257_0301 7b57f3ba941168d6cc41b9adab8ea003 472 Pfam PF04986 Putative transposase 141 365 2.0E-47 T 12-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 PA257_0301 7b57f3ba941168d6cc41b9adab8ea003 472 Pfam PF14319 Transposase zinc-binding domain 14 111 7.1E-22 T 12-10-2018 IPR026889 Transposase zinc-binding domain PA257_5251 7b57f3ba941168d6cc41b9adab8ea003 472 Pfam PF04986 Putative transposase 141 365 2.0E-47 T 12-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 PA257_5251 7b57f3ba941168d6cc41b9adab8ea003 472 Pfam PF14319 Transposase zinc-binding domain 14 111 7.1E-22 T 12-10-2018 IPR026889 Transposase zinc-binding domain PA257_0997 2ebf6bdb678167559610e4b40af22041 298 Pfam PF10124 Mu-like prophage major head subunit gpT 8 296 1.7E-119 T 12-10-2018 IPR018774 Bacteriophage Mu, GpT PA257_0608 b6f2198e6393d3a653f9f395a995acf2 316 Gene3D G3DSA:2.130.10.10 15 141 1.0E-18 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_0608 b6f2198e6393d3a653f9f395a995acf2 316 Gene3D G3DSA:2.130.10.10 142 315 1.5E-22 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PA257_0608 b6f2198e6393d3a653f9f395a995acf2 316 PIRSF PIRSF026412 1 316 7.6E-123 T 12-10-2018 IPR011217 Streptogramin lyase GO:0000287|GO:0016835|GO:0017001|GO:0046677 PA257_0608 b6f2198e6393d3a653f9f395a995acf2 316 SUPERFAMILY SSF101898 31 274 1.6E-31 T 12-10-2018 PA257_2259 1af68ce814bfb8fd0b477a66eef9e44b 109 Pfam PF05957 Bacterial protein of unknown function (DUF883) 13 109 8.7E-35 T 12-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 PA257_4778 d037bd087307f7cec65d52b6fd2098f7 154 Pfam PF05425 Copper resistance protein D 48 150 3.8E-19 T 12-10-2018 IPR008457 Copper resistance protein D GO:0016021 PA257_6155 5401c63ffa02ff3b0058ade8276d89e4 135 SUPERFAMILY SSF68912 100 133 5.89E-5 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily PA257_6155 5401c63ffa02ff3b0058ade8276d89e4 135 Pfam PF07498 Rho termination factor, N-terminal domain 102 133 1.1E-7 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 PA257_5769 266a17cb35bb171709e52b560e6722d0 162 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 80 - T 12-10-2018 IPR010916 TonB box, conserved site PA257_4333 607fccb33f2be39f46b089789caf1b90 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 219 3.1E-25 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel PA257_2622 cd0bc28887f6b8ec9b480e8dddcba949 309 Pfam PF12101 Protein of unknown function (DUF3577) 5 123 3.0E-37 T 12-10-2018 IPR021960 Protein of unknown function DUF3577 PA257_2622 cd0bc28887f6b8ec9b480e8dddcba949 309 Pfam PF12101 Protein of unknown function (DUF3577) 131 257 2.9E-48 T 12-10-2018 IPR021960 Protein of unknown function DUF3577 PA257_2621 5f632d18db38e3399984ddeb1a7e4500 229 Pfam PF11679 Protein of unknown function (DUF3275) 14 222 3.7E-96 T 12-10-2018 IPR021693 Protein of unknown function DUF3275 PA257_2427 a1f364f02a756a38f507ced69a42393f 55 Pfam PF11446 Protein of unknown function (DUF2897) 1 52 2.0E-25 T 12-10-2018 IPR021550 Protein of unknown function DUF2897 PA257_3148 3174ddce9411e358a5112f6942dd14f7 155 Pfam PF05069 Phage virion morphogenesis family 11 151 2.2E-25 T 12-10-2018 IPR006522 Phage virion morphogensis protein PA257_3148 3174ddce9411e358a5112f6942dd14f7 155 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 12 133 4.7E-15 T 12-10-2018 IPR006522 Phage virion morphogensis protein PA257_0503 3174ddce9411e358a5112f6942dd14f7 155 Pfam PF05069 Phage virion morphogenesis family 11 151 2.2E-25 T 12-10-2018 IPR006522 Phage virion morphogensis protein PA257_0503 3174ddce9411e358a5112f6942dd14f7 155 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 12 133 4.7E-15 T 12-10-2018 IPR006522 Phage virion morphogensis protein PA257_6223 b818a2934907aa071f6e4c7c519b75b1 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 6 60 3.1E-21 T 12-10-2018 IPR019201 Protein of unknown function DUF2065 PA257_2220 ec4998b63a9c85d079de523d2482a11c 654 Pfam PF06980 Protein of unknown function (DUF1302) 40 654 1.2E-185 T 12-10-2018 IPR010727 Protein of unknown function DUF1302 PA257_3472 2686ad6ec966f97cded29593d1761463 242 SUPERFAMILY SSF47240 64 206 1.43E-7 T 12-10-2018 IPR009078 Ferritin-like superfamily PA257_2732 fdf5f92168f6c0889821e1682cf7f47b 86 Pfam PF09498 Protein of unknown function (DUF2388) 25 82 4.2E-18 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_2732 fdf5f92168f6c0889821e1682cf7f47b 86 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 16 82 8.7E-16 T 12-10-2018 IPR012661 Conserved hypothetical protein CHP02448 PA257_3914 d60e440b2d113be735389ade532ec39b 161 Pfam PF04073 Aminoacyl-tRNA editing domain 22 148 7.8E-26 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PA257_3914 d60e440b2d113be735389ade532ec39b 161 Gene3D G3DSA:3.90.960.10 1 161 1.4E-42 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_3914 d60e440b2d113be735389ade532ec39b 161 SUPERFAMILY SSF55826 3 160 3.27E-40 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PA257_5755 c093043e2a229692449567529563310a 618 Pfam PF13387 Domain of unknown function (DUF4105) 119 291 1.2E-60 T 12-10-2018 IPR025178 Domain of unknown function DUF4105 PA257_3615 af328264a2f5f6a3ba34dd96d9212ded 370 Pfam PF11017 Protein of unknown function (DUF2855) 42 356 8.8E-107 T 12-10-2018 IPR021276 Protein of unknown function DUF2855 PA257_1975 e9476dd620fab16eaabab386c6f9d741 67 Pfam PF07869 Protein of unknown function (DUF1656) 6 59 2.0E-20 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 PA257_0771 0023cf104539da1c8bcb52aeaee11d81 702 Pfam PF12571 Phage tail-collar fibre protein 7 158 1.6E-46 T 12-10-2018 IPR022225 Phage tail fibre protein PA257_0771 0023cf104539da1c8bcb52aeaee11d81 702 Gene3D G3DSA:2.60.40.3940 600 702 2.3E-11 T 12-10-2018 PA257_4162 eb53dc1c7c251952a7d3be07791467ad 213 Pfam PF01810 LysE type translocator 16 205 1.7E-34 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_4162 eb53dc1c7c251952a7d3be07791467ad 213 PIRSF PIRSF006324 1 208 1.9E-44 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_2843 bb84c6b9683a5c797ef8ecb01fe7af4a 393 Pfam PF05762 VWA domain containing CoxE-like protein 187 272 2.4E-9 T 12-10-2018 IPR008912 Uncharacterised protein family CoxE-like PA257_6690 9b6ec8acff9b4fd876bde689f9241ab2 847 Pfam PF11739 Dicarboxylate transport 626 831 7.7E-60 T 12-10-2018 IPR021730 Dicarboxylate transport PA257_6869 325a0cf1786b3d3437515fc88732c8f6 254 Pfam PF03741 Integral membrane protein TerC family 14 204 2.8E-51 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 PA257_5215 41fbb2445913534d0786e5a123fd973f 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 3.6E-73 T 12-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type PA257_5215 41fbb2445913534d0786e5a123fd973f 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 249 7.7E-99 T 12-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type PA257_6747 04bf1e4cf56b72aa9b0f215f3d1e3ac7 127 PIRSF PIRSF029720 1 124 4.8E-56 T 12-10-2018 IPR014558 Uncharacterised conserved lipoprotein PA257_6747 04bf1e4cf56b72aa9b0f215f3d1e3ac7 127 Pfam PF03640 Secreted repeat of unknown function 29 67 5.4E-14 T 12-10-2018 IPR005297 Lipoprotein repeat PA257_6747 04bf1e4cf56b72aa9b0f215f3d1e3ac7 127 Pfam PF03640 Secreted repeat of unknown function 81 122 2.7E-19 T 12-10-2018 IPR005297 Lipoprotein repeat PA257_2989 8350d29944f69867f0d78ed31b138d9d 382 Pfam PF00487 Fatty acid desaturase 114 329 4.9E-28 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PA257_1211 548d3c0c476aa9e9d7e5012d71850c5b 196 Pfam PF13302 Acetyltransferase (GNAT) domain 21 162 1.9E-30 T 12-10-2018 IPR000182 GNAT domain PA257_1211 548d3c0c476aa9e9d7e5012d71850c5b 196 SUPERFAMILY SSF55729 15 189 1.19E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_1211 548d3c0c476aa9e9d7e5012d71850c5b 196 Gene3D G3DSA:3.40.630.30 3 175 4.1E-40 T 12-10-2018 PA257_1663 84eac3b6f77dbef7a9bd614763e0a594 136 Gene3D G3DSA:3.30.300.250 19 136 4.9E-59 T 12-10-2018 PA257_1663 84eac3b6f77dbef7a9bd614763e0a594 136 Pfam PF13652 Putative quorum-sensing-regulated virulence factor 20 131 3.4E-64 T 12-10-2018 IPR025203 Putative quorum-sensing-regulated virulence factor, QSregVF PA257_2262 e0b1ce069304ac8eff0a54dd5dc11c88 421 Gene3D G3DSA:2.40.160.10 32 421 9.1E-188 T 12-10-2018 IPR023614 Porin domain superfamily PA257_2262 e0b1ce069304ac8eff0a54dd5dc11c88 421 Pfam PF03573 outer membrane porin, OprD family 28 419 7.4E-166 T 12-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 PA257_4934 c3216444e4e7f5dc5ea9b9d34a9a100b 124 Pfam PF16931 Putative phage holin 1 120 3.2E-35 T 12-10-2018 IPR032637 Putative phage holin-like PA257_6038 4f62355b225c2a4e6a6f6ddd0fb2f7c1 309 Gene3D G3DSA:3.90.1690.10 1 309 3.2E-79 T 12-10-2018 PA257_3221 832da3aa8987e3513a06271201d24ca2 226 Gene3D G3DSA:3.40.50.850 9 215 2.7E-49 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_3221 832da3aa8987e3513a06271201d24ca2 226 Pfam PF00857 Isochorismatase family 20 172 6.5E-21 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 PA257_3221 832da3aa8987e3513a06271201d24ca2 226 SUPERFAMILY SSF52499 12 209 4.32E-47 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PA257_3981 e09c8ce7ff404370850209cb3630360c 155 Pfam PF06945 Protein of unknown function (DUF1289) 8 53 3.9E-15 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 PA257_4593 07207feccfadeb261bf6ed89d800fc7c 319 Gene3D G3DSA:3.60.130.10 19 291 7.0E-30 T 12-10-2018 PA257_4593 07207feccfadeb261bf6ed89d800fc7c 319 SUPERFAMILY SSF51197 23 289 1.05E-38 T 12-10-2018 PA257_4593 07207feccfadeb261bf6ed89d800fc7c 319 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 66 281 5.8E-17 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 PA257_0496 b962dfd82fd8b6a6917b30f0f7eccdf4 223 Pfam PF10124 Mu-like prophage major head subunit gpT 160 205 1.3E-6 T 12-10-2018 IPR018774 Bacteriophage Mu, GpT PA257_0496 b962dfd82fd8b6a6917b30f0f7eccdf4 223 Pfam PF10124 Mu-like prophage major head subunit gpT 8 161 5.4E-57 T 12-10-2018 IPR018774 Bacteriophage Mu, GpT PA257_2351 73db1db17e6ca787da4aa5206fb31367 210 Pfam PF16105 Domain of unknown function (DUF4823) 52 199 5.2E-60 T 12-10-2018 IPR032248 Protein of unknown function DUF4823 PA257_4596 8d2eebd93e12cbdb8cb807ce009b242a 232 SUPERFAMILY SSF51182 1 231 1.1E-74 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_4596 8d2eebd93e12cbdb8cb807ce009b242a 232 Gene3D G3DSA:2.60.120.10 9 231 1.1E-82 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_4596 8d2eebd93e12cbdb8cb807ce009b242a 232 Pfam PF02678 Pirin 12 118 2.4E-37 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 PA257_4596 8d2eebd93e12cbdb8cb807ce009b242a 232 PIRSF PIRSF006232 1 231 3.1E-56 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 PA257_4596 8d2eebd93e12cbdb8cb807ce009b242a 232 Gene3D G3DSA:2.60.120.10 11 134 1.1E-82 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_1384 74ba89abd0b27caa113c0e15dccbc627 122 Pfam PF11162 Protein of unknown function (DUF2946) 2 120 3.6E-11 T 12-10-2018 IPR021333 Protein of unknown function DUF2946 PA257_1340 729a6bf4f7dd8c9bb108e0c611375598 165 Pfam PF06271 RDD family 14 151 7.8E-29 T 12-10-2018 IPR010432 RDD PA257_4697 5915e425587a717be3ea55a1ac987b21 111 PIRSF PIRSF037256 1 111 2.6E-55 T 12-10-2018 IPR017160 Uncharacterised conserved protein UCP037256 PA257_5278 4776d6fbcdede8df26b83c55161a7530 424 Gene3D G3DSA:3.40.50.300 1 212 5.0E-36 T 12-10-2018 PA257_5278 4776d6fbcdede8df26b83c55161a7530 424 Pfam PF05707 Zonular occludens toxin (Zot) 2 213 9.4E-68 T 12-10-2018 IPR008900 Zona occludens toxin PA257_2313 fc430b412f56c946fafea468706be7e3 240 SUPERFAMILY SSF51695 2 237 8.16E-62 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PA257_2313 fc430b412f56c946fafea468706be7e3 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 231 1.1E-33 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PA257_2313 fc430b412f56c946fafea468706be7e3 240 Gene3D G3DSA:3.20.20.190 1 239 2.0E-62 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PA257_4070 96d2e7b3bb63f73fa65e5fbdedf970fc 144 Pfam PF09621 Type III secretion system regulator (LcrR) 3 140 3.7E-71 T 12-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 PA257_4070 96d2e7b3bb63f73fa65e5fbdedf970fc 144 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 3 140 3.4E-72 T 12-10-2018 IPR013405 Type III secretion system regulator, LcrR PA257_1551 41628a83c3ac00c20cc3cd96fd5677e5 615 Pfam PF09822 ABC-type uncharacterized transport system 33 300 2.4E-68 T 12-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 PA257_6689 528059135d44537a2fb92ac7dc650388 63 Pfam PF13617 YnbE-like lipoprotein 7 61 2.1E-26 T 12-10-2018 IPR025985 YnbE-like lipoprotein PA257_6689 528059135d44537a2fb92ac7dc650388 63 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 23 63 9.0E-17 T 12-10-2018 PA257_0197 5b3c372cb533d77754f810470b6da396 126 Pfam PF09345 Domain of unknown function (DUF1987) 6 122 2.5E-39 T 12-10-2018 IPR018530 Domain of unknown function DUF1987 PA257_0733 8c63b60d88c1df87905d2289a7e49a74 168 Pfam PF13590 Domain of unknown function (DUF4136) 31 165 6.0E-9 T 12-10-2018 IPR025411 Domain of unknown function DUF4136 PA257_2468 868a508aa3d498fc91a69b9e4dfcf017 77 Pfam PF06568 Domain of unknown function (DUF1127) 26 61 5.3E-12 T 12-10-2018 IPR009506 Protein of unknown function DUF1127 PA257_5040 de545782bdbc53036eec3bb2fb726a2d 214 Pfam PF04586 Caudovirus prohead serine protease 9 156 4.5E-27 T 12-10-2018 IPR006433 Prohead protease PA257_5040 de545782bdbc53036eec3bb2fb726a2d 214 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 18 153 1.2E-30 T 12-10-2018 IPR006433 Prohead protease PA257_5622 1df8d4837a200ba4fcec2f350a975d14 233 Pfam PF10979 Protein of unknown function (DUF2786) 5 44 9.7E-10 T 12-10-2018 IPR024498 Domain of unknown function DUF2786 PA257_5622 1df8d4837a200ba4fcec2f350a975d14 233 PIRSF PIRSF028111 1 231 1.9E-44 T 12-10-2018 IPR016868 Bacteriophage B3, Orf5 PA257_5014 583620caa961633dc2ca1fe9073fe34a 54 Pfam PF12088 Protein of unknown function (DUF3565) 1 46 5.5E-22 T 12-10-2018 IPR021948 Protein of unknown function DUF3565 PA257_5382 c6bc8d9472520d7f5db32efad51a5243 223 Pfam PF06271 RDD family 13 122 1.8E-20 T 12-10-2018 IPR010432 RDD PA257_5682 ffc92f88a536ebcdd2ee8c9157234f08 251 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 44 249 1.4E-88 T 12-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 PA257_2230 bd1a25c0f785178dadbe9d3c52025381 164 Pfam PF14316 Domain of unknown function (DUF4381) 6 162 6.6E-44 T 12-10-2018 IPR025489 Protein of unknown function (DUF4381 PA257_3783 b86326bbb3313a8ad1ce03555966bca2 277 Pfam PF02673 Bacitracin resistance protein BacA 9 259 2.5E-85 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PA257_3783 b86326bbb3313a8ad1ce03555966bca2 277 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 1.9E-81 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PA257_3783 b86326bbb3313a8ad1ce03555966bca2 277 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 264 17.822 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PA257_2814 a70e5465c4e6fc266b6e1b85ec0f8238 87 SUPERFAMILY SSF46689 2 68 7.7E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PA257_2814 a70e5465c4e6fc266b6e1b85ec0f8238 87 Pfam PF01527 Transposase 2 70 1.5E-22 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PA257_2059 ef701dd375b38ca6a5a3dcc6e98e24aa 52 Pfam PF11752 Protein of unknown function (DUF3309) 4 52 3.5E-21 T 12-10-2018 IPR021738 Protein of unknown function DUF3309 PA257_0588 cda0f4f9592e3ddcf9d76826b219c115 540 Pfam PF01384 Phosphate transporter family 84 529 1.0E-86 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 PA257_6065 2ef9a418e728003f2f9b2f39578f9177 187 Pfam PF13590 Domain of unknown function (DUF4136) 25 186 6.1E-30 T 12-10-2018 IPR025411 Domain of unknown function DUF4136 PA257_6065 2ef9a418e728003f2f9b2f39578f9177 187 Gene3D G3DSA:3.30.160.670 15 186 7.0E-33 T 12-10-2018 PA257_2401 10463c6657dd0c4660c9ff972b0db0a1 242 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 3 236 2.1E-56 T 12-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 PA257_3835 ae78eb648fc8f04e82ac8f0de1d43bba 316 Gene3D G3DSA:2.60.120.1440 102 232 2.1E-15 T 12-10-2018 PA257_3835 ae78eb648fc8f04e82ac8f0de1d43bba 316 PIRSF PIRSF018266 5 316 1.0E-92 T 12-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PA257_3835 ae78eb648fc8f04e82ac8f0de1d43bba 316 Pfam PF04773 FecR protein 114 204 5.8E-20 T 12-10-2018 IPR006860 FecR protein PA257_3835 ae78eb648fc8f04e82ac8f0de1d43bba 316 Pfam PF16220 Domain of unknown function (DUF4880) 15 57 2.9E-13 T 12-10-2018 IPR032623 FecR, N-terminal PA257_0705 21e88aeb14493ef8a925616494677746 117 Pfam PF05656 Protein of unknown function (DUF805) 12 113 1.2E-32 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 PA257_1188 4522eef0e41926de2de81533b838f9db 69 Pfam PF10981 Protein of unknown function (DUF2788) 14 60 3.5E-22 T 12-10-2018 IPR021249 Protein of unknown function DUF2788 PA257_4029 dc42f24d1af269ea70876b4e6b093b28 162 Gene3D G3DSA:1.25.40.10 15 159 9.9E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_1590 edbb234b372fb091c62872173ba2953c 408 Pfam PF04143 Sulphur transport 239 393 1.2E-20 T 12-10-2018 IPR007272 Sulphur transport domain PA257_1590 edbb234b372fb091c62872173ba2953c 408 Pfam PF04143 Sulphur transport 7 162 8.3E-26 T 12-10-2018 IPR007272 Sulphur transport domain PA257_3913 eefeb15a5501fea8de29a3b5f1a82bcc 120 Pfam PF04320 Protein with unknown function (DUF469) 15 116 3.6E-32 T 12-10-2018 IPR007416 Protein of unknown function DUF469 PA257_1872 ef1cce59dd5372ed5f2e2051e6ce8712 390 Pfam PF12698 ABC-2 family transporter protein 38 376 3.5E-21 T 12-10-2018 PA257_1872 ef1cce59dd5372ed5f2e2051e6ce8712 390 Gene3D G3DSA:3.40.1710.10 54 157 1.8E-5 T 12-10-2018 PA257_1198 88163952e5fab3101aa6b09f69131094 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 127 1.0E-4 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PA257_1198 88163952e5fab3101aa6b09f69131094 144 SUPERFAMILY SSF54593 8 133 2.89E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_1198 88163952e5fab3101aa6b09f69131094 144 Gene3D G3DSA:3.10.180.10 3 131 6.3E-38 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PA257_0121 d3fe0dbc3498b05ee7d83ccb3f940910 315 Pfam PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 179 276 5.1E-8 T 12-10-2018 IPR028917 Tox-GHH2 domain PA257_0121 d3fe0dbc3498b05ee7d83ccb3f940910 315 Pfam PF13665 Domain of unknown function (DUF4150) 21 133 9.1E-36 T 12-10-2018 IPR025425 Domain of unknown function DUF4150 PA257_5224 61d58d500653416874964b4617db9978 146 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 142 2.6E-53 T 12-10-2018 IPR022262 Lipoprotein, putative PA257_1110 30307bc2006f7c42d7831f21d080f4ce 335 Pfam PF14238 Domain of unknown function (DUF4340) 70 249 3.1E-13 T 12-10-2018 IPR025641 Domain of unknown function DUF4340 PA257_3225 d35dac401a66d4f73dea2a4a1535a951 141 PIRSF PIRSF029509 1 141 4.8E-48 T 12-10-2018 IPR016923 Uncharacterised conserved protein UCP029509, membrane PA257_1486 17b6b7b20634eb0cc6bb21ce96cf57b6 94 Pfam PF12021 Protein of unknown function (DUF3509) 5 88 4.2E-19 T 12-10-2018 IPR021898 Protein of unknown function DUF3509 PA257_3219 4f747e0baf60c3cff241dd734d528571 306 Pfam PF13557 Putative MetA-pathway of phenol degradation 57 302 2.5E-59 T 12-10-2018 IPR025737 MetA-pathway of phenol degradation, putative PA257_1134 4f2b64a9329f7531deae9dae0d16ca01 91 Pfam PF07119 Protein of unknown function (DUF1375) 4 77 3.7E-24 T 12-10-2018 IPR010780 Protein of unknown function DUF1375 PA257_4762 afe8e43408b9e8dfe8c711d728bcd62c 115 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 17 105 8.2E-27 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 PA257_4762 afe8e43408b9e8dfe8c711d728bcd62c 115 Pfam PF03334 Na+/H+ antiporter subunit 17 97 3.1E-27 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 PA257_0681 26adf4d7807413df75ae036011d15cea 169 Gene3D G3DSA:1.20.1550.10 2 167 1.3E-40 T 12-10-2018 IPR023380 DsbB-like superfamily PA257_0681 26adf4d7807413df75ae036011d15cea 169 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 6 168 18.331 T 12-10-2018 IPR022920 Disulphide bond formation protein DsbB PA257_0681 26adf4d7807413df75ae036011d15cea 169 Pfam PF02600 Disulfide bond formation protein DsbB 11 159 6.6E-34 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PA257_0681 26adf4d7807413df75ae036011d15cea 169 SUPERFAMILY SSF158442 13 159 1.05E-32 T 12-10-2018 IPR023380 DsbB-like superfamily PA257_3934 5e9c666e4ddc4ecd2da918c402e65c58 259 Pfam PF01925 Sulfite exporter TauE/SafE 15 249 2.6E-40 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PA257_2518 cec3c555a3912073dcf2c25188bd9106 473 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 463 2.1E-187 T 12-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 PA257_5648 559ee7d0ec2b4a65a6290b56c09d89b1 441 Pfam PF06864 Pilin accessory protein (PilO) 23 440 1.3E-91 T 12-10-2018 IPR009663 Pilin accessory predicted PA257_5523 ea6704317e9c17d62d63c13d47b2e99c 265 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 15 262 8.8E-93 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PA257_5523 ea6704317e9c17d62d63c13d47b2e99c 265 Pfam PF02405 Permease MlaE 49 260 3.7E-77 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 PA257_2788 ff8d0b21a6f315c927d8e971b5fc7644 77 Pfam PF12021 Protein of unknown function (DUF3509) 7 68 1.3E-11 T 12-10-2018 IPR021898 Protein of unknown function DUF3509 PA257_0021 334f2e19f7d0f239cc5539764050883c 295 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 285 1.4E-44 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PA257_0021 334f2e19f7d0f239cc5539764050883c 295 PIRSF PIRSF026649 1 295 1.2E-89 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PA257_3161 8f3fe06c6524521b1fd4798353f2829d 135 Pfam PF06252 Protein of unknown function (DUF1018) 20 125 3.6E-28 T 12-10-2018 IPR009363 Bacteriophage Mu, Gp16 PA257_0516 8f3fe06c6524521b1fd4798353f2829d 135 Pfam PF06252 Protein of unknown function (DUF1018) 20 125 3.6E-28 T 12-10-2018 IPR009363 Bacteriophage Mu, Gp16 PA257_3553 2ce64ab211c695c613b76b573fde9b27 112 Pfam PF11127 Protein of unknown function (DUF2892) 15 70 8.1E-8 T 12-10-2018 IPR021309 Protein of unknown function DUF2892 PA257_2604 411b30a7b2898c202402ea1a1d2368b1 126 Pfam PF01609 Transposase DDE domain 5 116 6.5E-12 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PA257_2400 4b78f5df730c93f1fd628929453c41c1 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 2 185 24.996 T 12-10-2018 IPR022929 Putative manganese efflux pump MntP PA257_2400 4b78f5df730c93f1fd628929453c41c1 189 Pfam PF02659 Putative manganese efflux pump 31 182 1.0E-52 T 12-10-2018 IPR003810 Putative manganese efflux pump PA257_5222 6c429695cc9a42c21864b4f5d160b720 310 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 13 275 2.5E-111 T 12-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 PA257_5222 6c429695cc9a42c21864b4f5d160b720 310 Pfam PF11920 Protein of unknown function (DUF3438) 9 284 7.5E-124 T 12-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 PA257_6117 1bcf129a0cdeb3540f868c40039a68d7 356 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 34 356 9.8E-163 T 12-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 PA257_6117 1bcf129a0cdeb3540f868c40039a68d7 356 PIRSF PIRSF029693 1 356 8.4E-220 T 12-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 PA257_6467 cff057cd31198be39a0c678345fe3672 153 Pfam PF05926 Phage head completion protein (GPL) 15 153 5.9E-48 T 12-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 PA257_1306 9a8ceef9ad927662f54873056e097c89 215 Gene3D G3DSA:3.40.50.1820 1 215 9.3E-77 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1306 9a8ceef9ad927662f54873056e097c89 215 Pfam PF02230 Phospholipase/Carboxylesterase 12 213 1.5E-45 T 12-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 PA257_1306 9a8ceef9ad927662f54873056e097c89 215 SUPERFAMILY SSF53474 9 215 6.6E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_3469 a51cf3d189162d1c4ed6a66ad281df1f 247 Pfam PF07505 Protein of unknown function (DUF5131) 4 242 3.7E-99 T 12-10-2018 IPR011101 Protein of unknown function DUF5131 PA257_3702 e354377b41764b9b2816a2e33d47eba7 108 Gene3D G3DSA:3.40.50.150 1 107 9.0E-6 T 12-10-2018 PA257_4475 416b3018c2b7e3df8e10a412d5b11319 111 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 1.0E-33 T 12-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 PA257_4475 416b3018c2b7e3df8e10a412d5b11319 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 21 93 3.9E-17 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 PA257_2087 e8048df65fffd4e222a904feb72c7fd5 105 Pfam PF03692 Putative zinc- or iron-chelating domain 8 79 1.3E-8 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein PA257_1329 dd288df2cc822de4239c9e1ac49ea44f 296 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 280 1.7E-31 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PA257_3425 4661236d751fac829c284a5880fff8d8 215 Pfam PF11508 Protein of unknown function (DUF3218) 3 215 1.2E-145 T 12-10-2018 IPR021593 Protein of unknown function DUF3218 PA257_3425 4661236d751fac829c284a5880fff8d8 215 SUPERFAMILY SSF53955 4 215 5.29E-115 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily PA257_3425 4661236d751fac829c284a5880fff8d8 215 Gene3D G3DSA:1.10.3690.10 1 215 5.0E-134 T 12-10-2018 IPR038265 PA2222-like domain superfamily PA257_6191 7e8e5737842ac8c27fbc7562a683bb8b 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 288 2.5E-50 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PA257_5606 4f12dcc75b59e1c6990c246496cfe41c 229 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 208 4.3E-16 T 12-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 PA257_0065 71d795bef02320b54d8f0b3a2498e74f 117 Pfam PF16068 Domain of unknown function (DUF4810) 26 108 2.7E-32 T 12-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats PA257_0065 71d795bef02320b54d8f0b3a2498e74f 117 PIRSF PIRSF020555 1 117 2.2E-59 T 12-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats PA257_2699 5dcc17ffbca3298b7dc9d13991a2795a 198 Pfam PF03592 Terminase small subunit 3 152 5.6E-37 T 12-10-2018 IPR005335 Terminase small subunit GO:0006323 PA257_2699 5dcc17ffbca3298b7dc9d13991a2795a 198 Gene3D G3DSA:1.10.10.1400 1 62 1.2E-24 T 12-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily PA257_2903 dee751ab12ff3237a918b9381da48564 352 Pfam PF01594 AI-2E family transporter 14 339 1.7E-52 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like PA257_3591 7aba5e790a21765eecf07d00e13e9b7b 71 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 53 4.9E-7 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal PA257_5925 e22e05cd17c10da2472eed67256435dd 170 Pfam PF13590 Domain of unknown function (DUF4136) 37 165 6.3E-11 T 12-10-2018 IPR025411 Domain of unknown function DUF4136 PA257_6601 10598933b49b43108501594a06627c64 160 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 146 1.8E-42 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 PA257_6601 10598933b49b43108501594a06627c64 160 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.724 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 PA257_4351 2c1fc2fc5d678c0f2c9aeccffb71a57e 173 Pfam PF03748 Flagellar basal body-associated protein FliL 75 173 1.9E-23 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PA257_3195 5d6b44577da604801ba2655e3864c943 181 Pfam PF16304 Domain of unknown function (DUF4946) 32 180 1.8E-69 T 12-10-2018 IPR032543 Protein of unknown function DUF4946 PA257_5786 57648571effecb826468a75fad8e8778 67 Pfam PF04328 Selenoprotein, putative 5 67 2.4E-30 T 12-10-2018 IPR007423 Selenoprotein, putative PA257_2231 4d930733b6c105f88d2d8413ceb92c3a 312 Pfam PF01882 Protein of unknown function DUF58 49 133 2.0E-20 T 12-10-2018 IPR002881 Domain of unknown function DUF58 PA257_5453 4f82ad207c1c94a146f8577ae9238e70 155 Pfam PF04186 FxsA cytoplasmic membrane protein 7 113 2.1E-34 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 PA257_5918 564a7d280a6b1a5796b06a0cd10383c3 255 Pfam PF00005 ABC transporter 17 167 3.9E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PA257_5918 564a7d280a6b1a5796b06a0cd10383c3 255 SMART SM00382 26 214 1.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain PA257_5918 564a7d280a6b1a5796b06a0cd10383c3 255 Gene3D G3DSA:3.40.50.300 1 255 2.7E-65 T 12-10-2018 PA257_5918 564a7d280a6b1a5796b06a0cd10383c3 255 SUPERFAMILY SSF52540 2 227 1.04E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_0653 22bde135cfc76473fe5ba13c9dbf58f7 171 Gene3D G3DSA:3.30.70.3460 28 170 1.4E-37 T 12-10-2018 PA257_5813 5a87bae057afc087712871d35f4dadde 192 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 4.4E-20 T 12-10-2018 IPR001727 Gdt1 family PA257_5813 5a87bae057afc087712871d35f4dadde 192 Pfam PF01169 Uncharacterized protein family UPF0016 9 79 2.3E-19 T 12-10-2018 IPR001727 Gdt1 family PA257_6365 233ce495932b93372cbf65315a8087ef 153 Pfam PF03682 Uncharacterised protein family (UPF0158) 1 152 1.9E-56 T 12-10-2018 IPR005361 Uncharacterised protein family UPF0158 PA257_5358 8ef95c401b9dbc0f2e28f8988957d869 556 Pfam PF09977 Putative Tad-like Flp pilus-assembly 55 156 2.7E-8 T 12-10-2018 IPR018705 Domain of unknown function DUF2134, membrane PA257_4891 a2ab1d4f2e5a5a7a605549d8244a3113 139 Pfam PF09842 Predicted membrane protein (DUF2069) 24 128 4.1E-31 T 12-10-2018 IPR018643 Protein of unknown function DUF2069, membrane PA257_6655 b7068c5a4de9ba8ace4c6a8a2ad86fd0 104 Pfam PF05598 Transposase domain (DUF772) 1 68 4.7E-22 T 12-10-2018 IPR008490 Transposase InsH, N-terminal PA257_1645 c5930106b5e3d2fa015caea130916fa9 279 Pfam PF06995 Phage P2 GpU 157 274 2.6E-36 T 12-10-2018 IPR009734 Myoviridae, GpU PA257_1645 c5930106b5e3d2fa015caea130916fa9 279 PIRSF PIRSF011237 1 279 3.0E-118 T 12-10-2018 IPR014458 Uncharacterised protein family, phage P2-GpU-fusion PA257_3390 276b523cea8fc5142b0587a35cd50bbe 42 Gene3D G3DSA:3.60.130.10 1 42 1.6E-13 T 12-10-2018 PA257_3390 276b523cea8fc5142b0587a35cd50bbe 42 SUPERFAMILY SSF51197 1 41 2.24E-8 T 12-10-2018 PA257_1785 1af5beadda8b283820588c625ac310cb 266 Pfam PF14257 Domain of unknown function (DUF4349) 25 250 3.5E-24 T 12-10-2018 IPR025645 Domain of unknown function DUF4349 PA257_0334 92c57876b4731e1973c392cf9a0d03d9 135 Pfam PF07883 Cupin domain 48 117 2.7E-15 T 12-10-2018 IPR013096 Cupin 2, conserved barrel PA257_0334 92c57876b4731e1973c392cf9a0d03d9 135 Gene3D G3DSA:2.60.120.10 14 125 3.4E-18 T 12-10-2018 IPR014710 RmlC-like jelly roll fold PA257_0334 92c57876b4731e1973c392cf9a0d03d9 135 SUPERFAMILY SSF51182 31 117 1.15E-17 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily PA257_5401 ff0f85eaa7f30b5ee49a90c6459a4c8f 203 Pfam PF11008 Protein of unknown function (DUF2846) 15 145 1.4E-33 T 12-10-2018 IPR022548 Domain of unknown function DUF2846 PA257_4234 ccf0fd169d0aa1460ba920d4023ea1d5 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 9 45 4.3E-9 T 12-10-2018 IPR008621 Cbb3-type cytochrome oxidase component PA257_2750 142bdfe2e889ec7f85607befef5ce41f 89 Gene3D G3DSA:1.10.260.40 1 76 1.7E-14 T 12-10-2018 PA257_2636 55a73b04d7f5090018aba7d048d1a8f6 175 Pfam PF11358 Protein of unknown function (DUF3158) 11 165 1.6E-72 T 12-10-2018 IPR021502 Protein of unknown function DUF3158 PA257_4569 b20d37e7b9a41995659c242e88ab3ea9 679 Pfam PF04632 Fusaric acid resistance protein family 24 664 3.6E-141 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 PA257_2950 af7cf248c264793a1eff95529b3eab1a 119 Pfam PF02635 DsrE/DsrF-like family 4 118 2.0E-20 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein PA257_2950 af7cf248c264793a1eff95529b3eab1a 119 Gene3D G3DSA:3.40.1260.10 3 119 5.4E-35 T 12-10-2018 IPR027396 DsrEFH-like PA257_2950 af7cf248c264793a1eff95529b3eab1a 119 SUPERFAMILY SSF75169 4 118 5.72E-35 T 12-10-2018 IPR027396 DsrEFH-like PA257_2950 af7cf248c264793a1eff95529b3eab1a 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 5 118 2.1E-40 T 12-10-2018 IPR017462 Sulphur relay, TusC/DsrF PA257_5754 d17292f615b53c88f678b6f0b0892cd5 162 Pfam PF11220 Protein of unknown function (DUF3015) 19 158 4.7E-56 T 12-10-2018 IPR021383 Protein of unknown function DUF3015 PA257_5235 462064b842e0befb353947d89f1564b8 153 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 9 144 1.1E-57 T 12-10-2018 IPR021679 Toxin endonuclease, YhaV GO:0004540|GO:0110001 PA257_6466 d827972da376161a44e384e80ee37dd2 233 Pfam PF05944 Phage small terminase subunit 38 167 6.0E-49 T 12-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 PA257_3507 96f76ef29c8ce8e30a15eea629985dac 371 Gene3D G3DSA:3.30.200.20 38 144 1.5E-15 T 12-10-2018 PA257_3507 96f76ef29c8ce8e30a15eea629985dac 371 Pfam PF01636 Phosphotransferase enzyme family 61 308 1.2E-37 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase PA257_3507 96f76ef29c8ce8e30a15eea629985dac 371 SUPERFAMILY SSF56112 57 342 5.1E-41 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily PA257_3507 96f76ef29c8ce8e30a15eea629985dac 371 Gene3D G3DSA:3.90.1200.10 145 358 2.2E-35 T 12-10-2018 PA257_6090 4677d374dd692ccae0789003c6cda664 130 Pfam PF03692 Putative zinc- or iron-chelating domain 25 121 9.9E-16 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein PA257_6646 667db6c23d7a55f034f55aab0a6978b7 86 Pfam PF04380 Membrane fusogenic activity 5 78 5.5E-25 T 12-10-2018 IPR007475 Membrane fusogenic activity PA257_5243 c316309aa034ae9bb40fe59a53ae6f42 55 Pfam PF11809 Domain of unknown function (DUF3330) 1 55 3.4E-35 T 12-10-2018 IPR021767 Transposon Tn21 modulator protein PA257_4158 04738ec0ee3f3c7e007e86a6967d47b7 268 Pfam PF16234 Domain of unknown function (DUF4892) 20 201 4.2E-97 T 12-10-2018 IPR032608 Protein of unknown function DUF4892 PA257_5231 8fd085003323f967c4384434d034bf49 464 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 48 457 1.8E-176 T 12-10-2018 IPR021204 Integrating conjugative element protein, PFL4711 PA257_1852 8125b6a5d54cef70a85602385fe53bb3 270 Pfam PF13369 Transglutaminase-like superfamily 37 184 2.5E-36 T 12-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 PA257_2506 07c6546d1f1d9c8fd392a3d9a28e41a9 152 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 8 144 3.1E-59 T 12-10-2018 IPR021679 Toxin endonuclease, YhaV GO:0004540|GO:0110001 PA257_3579 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 109 133 2.9E-37 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_3579 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 34 53 2.9E-37 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_3579 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 53 71 2.9E-37 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_3579 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 80 102 2.9E-37 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_3579 df3137c89d560647e66295e3b24b5179 163 Pfam PF02308 MgtC family 31 154 5.4E-35 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PA257_4690 b623f9b0f1e58ee6a6cffba1b42da199 190 Pfam PF13689 Domain of unknown function (DUF4154) 48 185 1.6E-32 T 12-10-2018 IPR025293 YfiR-like PA257_4370 4c84cd42d36b7ad72fd45de6567e05b7 203 SMART SM01144 2 187 2.2E-66 T 12-10-2018 IPR005636 DTW PA257_4370 4c84cd42d36b7ad72fd45de6567e05b7 203 Pfam PF03942 DTW domain 5 182 5.4E-49 T 12-10-2018 IPR005636 DTW PA257_5217 503bd599af5bca373baeeecf3f0a640e 126 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 17 110 9.2E-35 T 12-10-2018 IPR019110 Uncharacterised protein family, RAQPRD PA257_5217 503bd599af5bca373baeeecf3f0a640e 126 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 36 109 1.7E-27 T 12-10-2018 IPR019110 Uncharacterised protein family, RAQPRD PA257_3698 458eaf108a17d2dfb9094f4230612ce2 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 98 8.3E-23 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD PA257_6244 b558b158d4d0f89ef6d1e051a27acd0d 512 Pfam PF10144 Bacterial virulence factor haemolysin 30 158 5.6E-8 T 12-10-2018 IPR019305 Uncharacterised protein family Smp PA257_6968 d860cbf01aadc977b6dc6d33f26e6936 262 SUPERFAMILY SSF52540 1 253 1.32E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PA257_6968 d860cbf01aadc977b6dc6d33f26e6936 262 Pfam PF13614 AAA domain 3 178 3.6E-64 T 12-10-2018 IPR025669 AAA domain PA257_6968 d860cbf01aadc977b6dc6d33f26e6936 262 PIRSF PIRSF009320 87 260 1.2E-7 T 12-10-2018 PA257_6968 d860cbf01aadc977b6dc6d33f26e6936 262 PIRSF PIRSF009320 2 85 4.3E-14 T 12-10-2018 PA257_6968 d860cbf01aadc977b6dc6d33f26e6936 262 Gene3D G3DSA:3.40.50.300 1 261 5.8E-79 T 12-10-2018 PA257_3522 89b10b04faa40400094399bf0cf30471 506 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 439 1.1E-135 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane PA257_6827 21989ec3574ac6532f1f1c7713a88e6f 404 Pfam PF04143 Sulphur transport 54 380 2.6E-80 T 12-10-2018 IPR007272 Sulphur transport domain PA257_5986 3917a67786cac8d716c9a28719376cb3 144 SUPERFAMILY SSF55961 1 144 3.14E-35 T 12-10-2018 PA257_5986 3917a67786cac8d716c9a28719376cb3 144 Gene3D G3DSA:3.30.530.20 3 144 2.7E-41 T 12-10-2018 IPR023393 START-like domain superfamily PA257_5986 3917a67786cac8d716c9a28719376cb3 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 135 8.6E-35 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 PA257_1212 2278c9a0e27365f87d3bb55b556e554e 192 Pfam PF13302 Acetyltransferase (GNAT) domain 17 158 1.8E-33 T 12-10-2018 IPR000182 GNAT domain PA257_1212 2278c9a0e27365f87d3bb55b556e554e 192 SUPERFAMILY SSF55729 11 159 2.61E-39 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase PA257_1212 2278c9a0e27365f87d3bb55b556e554e 192 Gene3D G3DSA:3.40.630.30 3 170 1.1E-44 T 12-10-2018 PA257_2605 5ab440afcb8ba0ef3740432416b3e371 144 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 10 86 6.3E-24 T 12-10-2018 IPR025161 Putative transposase IS4/IS5 family PA257_6089 596aa5f0b15d4d69bd57cddce6596ffd 411 Pfam PF08874 Domain of unknown function (DUF1835) 89 201 2.0E-14 T 12-10-2018 IPR014973 Protein of unknown function DUF1835 PA257_6534 2e797c1d27015b75e0af5b26b158a77b 135 Pfam PF13488 Glycine zipper 77 119 3.0E-5 T 12-10-2018 IPR039567 Glycine zipper domain PA257_0017 3256a8815e35079368a06ab9f3e7a37e 568 SUPERFAMILY SSF46626 322 568 3.66E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_2890 6bac7df781b1d4afc125cd53c49f18ab 397 Pfam PF05940 NnrS protein 14 391 7.1E-113 T 12-10-2018 IPR010266 NnrS PA257_3549 3b36ca84b5daee6e303c10b9651ded55 196 Gene3D G3DSA:3.40.50.720 19 194 2.3E-6 T 12-10-2018 PA257_6819 36bbc81fd5b5a203ede101292a319d64 81 Pfam PF04226 Transglycosylase associated protein 33 80 3.1E-12 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 PA257_2441 8cb4c2e47a542fced64b729edd9846cb 138 SUPERFAMILY SSF56524 17 137 2.09E-18 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PA257_3001 496b3bd28b6ff3853accd2ab37a549bb 141 Pfam PF07849 Protein of unknown function (DUF1641) 95 128 2.4E-9 T 12-10-2018 IPR012440 Protein of unknown function DUF1641 PA257_5384 fe8c69725dba8de1057fb5ca653ab3db 523 Pfam PF13559 Domain of unknown function (DUF4129) 442 514 2.4E-5 T 12-10-2018 IPR025403 Domain of unknown function DUF4129 PA257_1006 de3a252d22fbf5870953a47406eb351c 106 Pfam PF10805 Protein of unknown function (DUF2730) 20 94 5.6E-9 T 12-10-2018 IPR020269 Bacteriophage Mu, Gp25 PA257_2459 6b3104a55923c31461135cf023b7d039 83 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 24 83 3.9E-11 T 12-10-2018 IPR021793 Major outer membrane lipoprotein Oprl PA257_1004 e473546ded9f3de4c207f344c1d15aca 182 Pfam PF11985 Protein of unknown function (DUF3486) 1 180 5.6E-38 T 12-10-2018 IPR021874 Bacteriophage Mu, Gp27 PA257_6578 ef675eef0df125669f771524fb3fa6d6 69 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 5 69 1.4E-32 T 12-10-2018 IPR012662 Conserved hypothetical protein CHP02449 PA257_1989 aa2c68e138ac17fd63ec33b0eb3ec1d5 271 Pfam PF13503 Domain of unknown function (DUF4123) 28 148 7.5E-19 T 12-10-2018 IPR025391 Domain of unknown function DUF4123 PA257_5104 4cdf61e2b2d2b9afce1e5e2989af2751 107 Pfam PF11804 Protein of unknown function (DUF3325) 2 101 1.4E-30 T 12-10-2018 IPR021762 Protein of unknown function DUF3325 PA257_0294 26cfa4884554b00c04e31f937c6f1fd9 589 SUPERFAMILY SSF53474 39 338 2.18E-14 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_2722 6a4fc4ac80dc77522adcd1f4c8852f82 275 SMART SM01040 17 102 4.9E-40 T 12-10-2018 IPR003497 BRO N-terminal domain PA257_2722 6a4fc4ac80dc77522adcd1f4c8852f82 275 Pfam PF02498 BRO family, N-terminal domain 17 102 2.3E-24 T 12-10-2018 IPR003497 BRO N-terminal domain PA257_5893 890cfba280c7753c128ab9224ca7541a 206 Pfam PF04403 Paraquat-inducible protein A 43 198 5.5E-56 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like PA257_0342 90b55ac147382e8d8c8fa46ce2d97ed8 250 Pfam PF01925 Sulfite exporter TauE/SafE 13 243 4.6E-25 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PA257_5202 89b79fe00724d72131c51ce7b390604a 304 Pfam PF12101 Protein of unknown function (DUF3577) 5 120 2.0E-37 T 12-10-2018 IPR021960 Protein of unknown function DUF3577 PA257_5202 89b79fe00724d72131c51ce7b390604a 304 Pfam PF12101 Protein of unknown function (DUF3577) 132 257 4.5E-48 T 12-10-2018 IPR021960 Protein of unknown function DUF3577 PA257_1840 461bc6ad0a8d42d296fe02df8415d2f0 228 Pfam PF04172 LrgB-like family 14 226 9.6E-70 T 12-10-2018 IPR007300 CidB/LrgB family PA257_2072 2b909a7024910c291b34dae22f65e403 184 Gene3D G3DSA:3.40.50.360 1 184 4.3E-54 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_2072 2b909a7024910c291b34dae22f65e403 184 SUPERFAMILY SSF52218 1 178 6.95E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily PA257_2072 2b909a7024910c291b34dae22f65e403 184 Pfam PF03358 NADPH-dependent FMN reductase 41 118 6.3E-8 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PA257_3878 ac28beca9b3cd1f5eb5fea0951414d25 263 Pfam PF12787 EcsC protein family 8 243 1.3E-39 T 12-10-2018 IPR024787 EcsC protein PA257_3361 6a0648da97c2fbc8bbe8dad6dac7b4f9 485 Pfam PF01435 Peptidase family M48 285 450 6.0E-12 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PA257_0779 7d8e8a92acb5e8df7af5aa0c58627b3b 329 Pfam PF05954 Phage late control gene D protein (GPD) 38 312 9.9E-22 T 12-10-2018 PA257_0779 7d8e8a92acb5e8df7af5aa0c58627b3b 329 SUPERFAMILY SSF69279 4 173 4.02E-27 T 12-10-2018 PA257_2091 aec2e2893aae6146b3cf1f750e8ccd75 146 Pfam PF07813 LTXXQ motif family protein 43 123 5.7E-7 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 PA257_2091 aec2e2893aae6146b3cf1f750e8ccd75 146 Gene3D G3DSA:1.20.120.1490 76 138 2.5E-7 T 12-10-2018 PA257_3655 8a74496bbd43d9b4e33421e5fb80aa06 624 Gene3D G3DSA:1.10.760.10 330 400 2.7E-5 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_3655 8a74496bbd43d9b4e33421e5fb80aa06 624 SUPERFAMILY SSF46626 344 624 3.54E-16 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_1550 cc985b9471bc7df553c6d327baef2538 244 Pfam PF12679 ABC-2 family transporter protein 67 237 1.0E-8 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 PA257_3511 dfcd290b19fade373c8b0a6250afd594 206 Pfam PF04403 Paraquat-inducible protein A 44 198 6.9E-56 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like PA257_1111 b0e4098cdca84658c5cdf6fd4234e91f 600 Pfam PF09822 ABC-type uncharacterized transport system 34 291 3.0E-62 T 12-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 PA257_3110 14e0419acf7eabaec97f156a9db10859 382 Pfam PF03929 PepSY-associated TM region 8 373 1.7E-56 T 12-10-2018 IPR005625 PepSY-associated TM protein PA257_1933 8dcc846f3feb934b5e04ceb6c782d314 338 Pfam PF10974 Protein of unknown function (DUF2804) 8 337 6.8E-81 T 12-10-2018 IPR021243 Protein of unknown function DUF2804 PA257_2051 2aea3d1c231649189e6a587a29dda920 453 SUPERFAMILY SSF53474 88 419 3.74E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold PA257_1424 c47b661e7fed21d1fa9213f3a001af2e 661 Pfam PF11843 Protein of unknown function (DUF3363) 290 660 2.1E-138 T 12-10-2018 IPR021795 Protein of unknown function DUF3363 PA257_2713 3700ccfc2a52046796eb84731cf18eb8 87 Pfam PF08809 Phage related hypothetical protein (DUF1799) 3 78 3.0E-25 T 12-10-2018 IPR014915 Bacteriophage TLS, TfmB PA257_0983 757dd8b173cc1b35ce2e558c4bd6fcd0 736 Pfam PF13550 Putative phage tail protein 213 358 1.0E-9 T 12-10-2018 IPR032876 Tip attachment protein J PA257_6088 c7d2bb1325c933f200e1f4235be992b3 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 8 144 2.3E-40 T 12-10-2018 IPR006750 Putative inner membrane exporter, YdcZ PA257_2883 7826f99b824bfac9ed2b16d0c6abc741 194 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 88 175 3.8E-6 T 12-10-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b PA257_6102 5d4a05dc3fb6aedc8ccdeaa9100ea632 151 Pfam PF09980 Predicted membrane protein (DUF2214) 3 148 2.7E-53 T 12-10-2018 IPR018706 Protein of unknown function DUF2214, membrane PA257_5213 5d05cf9a9943d24973c583f5a196c07a 182 Pfam PF11072 Protein of unknown function (DUF2859) 34 180 5.9E-54 T 12-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 PA257_5213 5d05cf9a9943d24973c583f5a196c07a 182 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 78 182 1.1E-42 T 12-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 PA257_4792 90895ffaf35dd23b99fb4798100d5d0c 227 Pfam PF08808 RES domain 39 183 2.0E-25 T 12-10-2018 IPR014914 RES domain PA257_4792 90895ffaf35dd23b99fb4798100d5d0c 227 SMART SM00953 47 184 2.7E-36 T 12-10-2018 IPR014914 RES domain PA257_0082 f6516ef941ccf10aa5d68331757e4ef8 336 Pfam PF10023 Putative aminopeptidase 10 328 4.4E-135 T 12-10-2018 IPR014553 Predicted aminopeptidase PA257_0082 f6516ef941ccf10aa5d68331757e4ef8 336 PIRSF PIRSF029285 1 335 9.9E-172 T 12-10-2018 IPR014553 Predicted aminopeptidase PA257_0082 f6516ef941ccf10aa5d68331757e4ef8 336 SUPERFAMILY SSF55486 148 198 8.79E-5 T 12-10-2018 PA257_4484 6022a8b8d83037009a13f2cc2b0b8bc7 234 Gene3D G3DSA:1.20.1720.10 7 233 2.5E-37 T 12-10-2018 PA257_4484 6022a8b8d83037009a13f2cc2b0b8bc7 234 Pfam PF07690 Major Facilitator Superfamily 12 193 3.3E-26 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PA257_4484 6022a8b8d83037009a13f2cc2b0b8bc7 234 SUPERFAMILY SSF103473 6 210 6.41E-32 T 12-10-2018 IPR036259 MFS transporter superfamily PA257_3911 5f41706b0f4003bdaa2df448e3a86bb0 154 Gene3D G3DSA:3.90.1720.10 3 154 1.3E-75 T 12-10-2018 PA257_3911 5f41706b0f4003bdaa2df448e3a86bb0 154 SUPERFAMILY SSF54001 7 100 2.99E-6 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PA257_1419 10f3cdc8759c151a49df430781590e8d 284 Pfam PF10134 Replication initiator protein A 31 260 1.4E-90 T 12-10-2018 IPR018777 Replication initiator protein A PA257_1416 442da63afee19f52f5bfdc3c92817627 116 Pfam PF11171 Protein of unknown function (DUF2958) 5 114 4.7E-40 T 12-10-2018 IPR021341 Protein of unknown function DUF2958 PA257_5362 6bd25359afd04701cdfa66fd80d4f83a 294 Pfam PF00482 Type II secretion system (T2SS), protein F 127 253 4.1E-16 T 12-10-2018 IPR018076 Type II secretion system F domain PA257_5362 6bd25359afd04701cdfa66fd80d4f83a 294 Gene3D G3DSA:1.20.81.30 109 230 8.1E-6 T 12-10-2018 PA257_5388 989604be29848654d878af3457acc016 119 Pfam PF07238 PilZ domain 5 98 2.9E-5 T 12-10-2018 IPR009875 PilZ domain GO:0035438 PA257_0261 50ab8038037dfe568ae365836fb7b7e2 277 SUPERFAMILY SSF111364 23 276 1.83E-51 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 PA257_5260 b21c742946e6302875c5a60462c1928b 60 Pfam PF02411 MerT mercuric transport protein 2 60 1.4E-26 T 12-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 PA257_0995 07ef7a3f2bb3b102477794a9af1c4c72 171 Pfam PF07030 Protein of unknown function (DUF1320) 3 145 4.1E-29 T 12-10-2018 IPR009752 Bacteriophage Mu, Gp36 PA257_5430 7a47e2274047e77e782c39d110faf632 200 Pfam PF01810 LysE type translocator 15 198 4.8E-42 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_4933 7b990c623271fe88bc68bdf8427cc535 91 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 89 7.8E-27 T 12-10-2018 IPR008473 Putative 3TM holin, Phage holin 3 PA257_5234 7164f3e12e46bdef81156eee82120e3c 74 Pfam PF12553 Protein of unknown function (DUF3742) 3 73 3.4E-25 T 12-10-2018 IPR022213 Protein of unknown function DUF3742 PA257_4277 d1e9e02d3e3cba9d0998c45565488b2f 425 Pfam PF06181 Urate oxidase N-terminal 4 294 2.0E-128 T 12-10-2018 IPR010389 Urate oxidase N-terminal PA257_2715 17416d75f855afab209f6f9dca4342e1 112 Pfam PF05939 Phage minor tail protein 4 110 5.6E-33 T 12-10-2018 IPR010265 Bacteriophage lambda, GpM, minor tail PA257_2003 75d8e7ffc0962bf73390849463c4b33c 196 Pfam PF07681 DoxX 23 108 1.1E-22 T 12-10-2018 IPR032808 DoxX family PA257_6604 883823d30442419f30121cb07980e5f0 252 Pfam PF03741 Integral membrane protein TerC family 14 203 5.4E-51 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 PA257_3269 4d813c112f92e9f5408b365538c44c4d 332 Pfam PF14891 Effector protein 216 302 6.4E-8 T 12-10-2018 IPR028208 Effector protein NleD-like PA257_3282 71fd7a7e6d12ce128518dc7f8205bcdb 1271 Pfam PF14331 ImcF-related N-terminal domain 115 352 9.5E-49 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain PA257_2639 a12e0943b8d5b0c3648dc52c6a6dd446 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 4.6E-63 T 12-10-2018 IPR021364 Protein of unknown function DUF2857 PA257_0459 b336fc0c32b58b59657d3d9b0e25dfff 448 Pfam PF07044 Protein of unknown function (DUF1329) 81 444 6.7E-139 T 12-10-2018 IPR010752 Protein of unknown function DUF1329 PA257_6464 bb0cc74e37d9b6b3ef3677c4049ccc8b 273 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 273 2.8E-104 T 12-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 PA257_2026 0b4184efd74a5772473f9c1c2c972a9f 143 Pfam PF06803 Protein of unknown function (DUF1232) 67 102 1.7E-13 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 PA257_4927 6830d02b51ed6f30d9ee682114bbbdc8 153 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 1.1E-20 T 12-10-2018 IPR009921 Domain of unknown function DUF1456 PA257_4927 6830d02b51ed6f30d9ee682114bbbdc8 153 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 2.5E-25 T 12-10-2018 IPR009921 Domain of unknown function DUF1456 PA257_5353 172336d328560322caeb0920afb71a7e 489 Pfam PF01384 Phosphate transporter family 30 478 1.7E-85 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 PA257_6608 eb76d2533fd55e9768081dd0944b1330 357 ProDom PD032367 ALGINATE REGULATORY ALGR3 ALGP TRANSCRIPTION TRANSCRIPTIONAL DNA-BINDING ACTIVATOR KINASES KINASE 1 123 2.0E-47 T 12-10-2018 PA257_0664 23533777027161f3cdf0c251e1fe748f 146 Gene3D G3DSA:1.10.760.10 1 146 5.0E-45 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0664 23533777027161f3cdf0c251e1fe748f 146 SUPERFAMILY SSF46626 39 143 2.6E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PA257_0664 23533777027161f3cdf0c251e1fe748f 146 Pfam PF00034 Cytochrome c 50 131 2.0E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PA257_1005 7e80e91c93da51b4228f2985aa5a589f 100 SUPERFAMILY SSF46785 8 86 2.58E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PA257_2469 d2d4a53d9ef72a984a2399285afbc2a4 402 Pfam PF06224 Winged helix DNA-binding domain 38 379 2.7E-82 T 12-10-2018 IPR009351 Protein of unknown function DUF1006 PA257_6399 48d9560c22e92146cd41baf711d5f199 85 Pfam PF04355 SmpA / OmlA family 22 47 6.2E-6 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PA257_2380 ba74e30f8fa83daebf342b21673ce4a7 204 PIRSF PIRSF006324 1 203 1.0E-44 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_2380 ba74e30f8fa83daebf342b21673ce4a7 204 Pfam PF01810 LysE type translocator 14 200 1.2E-29 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_5863 39b2b60d70e6cf77797bb694e75954cd 430 ProDom PD140749 ORF PHAGE PA0727 1 429 0.0 T 12-10-2018 PA257_3200 1ccd78cca2e785ae37ede1f7facca887 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 4.2E-16 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 PA257_1408 bcb7d60b9c9a303659a4ecc35da5e371 519 Gene3D G3DSA:1.25.40.10 18 241 3.2E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PA257_2810 58b5b368351dc566bd9d266e8b998d95 599 Pfam PF10592 AIPR protein 242 520 1.8E-36 T 12-10-2018 IPR018891 Abortive bacteriophage infection, resistance PA257_1378 cf1f40351c9d69eb1f21e75e230cdf6f 153 Pfam PF11162 Protein of unknown function (DUF2946) 12 149 2.0E-18 T 12-10-2018 IPR021333 Protein of unknown function DUF2946 PA257_3209 618264d9b609a3e3c1769c6e5fd09078 170 SMART SM01040 18 104 3.7E-17 T 12-10-2018 IPR003497 BRO N-terminal domain PA257_3209 618264d9b609a3e3c1769c6e5fd09078 170 Pfam PF02498 BRO family, N-terminal domain 20 104 2.1E-9 T 12-10-2018 IPR003497 BRO N-terminal domain PA257_1488 8f0ac94ed20d50befe2c1515afc2228c 206 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 66 202 1.7E-50 T 12-10-2018 IPR019231 Protein of unknown function DUF2170 PA257_1627 52c22418ab8ab09b7c4c25ef2fee8434 116 Pfam PF02924 Bacteriophage lambda head decoration protein D 21 99 1.0E-14 T 12-10-2018 IPR004195 Head decoration protein D PA257_6858 9e94a9c2e9b5e9e5d45edc7b92dfdef6 380 Pfam PF01757 Acyltransferase family 7 341 7.4E-26 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 PA257_6448 cf6e465a84944d2ca8cbe49a6b6d0b0a 229 Pfam PF04367 Protein of unknown function (DUF502) 72 175 3.4E-12 T 12-10-2018 IPR007462 Protein of unknown function DUF502 PA257_2647 488ae7ada4275fe691eca6a98c9ce5c6 106 Pfam PF11747 Killing trait 11 77 3.1E-27 T 12-10-2018 IPR021070 Killing trait, RebB PA257_6948 8a87bbd76632985420cefc1e8d3a43a0 132 Pfam PF08905 Domain of unknown function (DUF1850) 21 105 1.2E-22 T 12-10-2018 IPR015001 Protein of unknown function DUF1850 PA257_4994 34ccf896d23248e045e3eb525b1ca80b 339 Pfam PF10974 Protein of unknown function (DUF2804) 24 338 3.8E-76 T 12-10-2018 IPR021243 Protein of unknown function DUF2804 PA257_4893 45425b87a7147ea4bd5491eab6123b83 345 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 20 247 6.8E-68 T 12-10-2018 IPR018642 Protein of unknown function DUF2066 PA257_5007 b81de985852287fc34125a6f265852ba 207 TIGRFAM TIGR03398 plc_access_R: phospholipase C accessory protein PlcR 66 205 4.1E-61 T 12-10-2018 IPR017769 Phospholipase C accessory protein PlcR PA257_1087 f300d24155c2b6f1555c970509e74d64 196 Pfam PF10986 Protein of unknown function (DUF2796) 31 191 2.3E-55 T 12-10-2018 IPR021253 Protein of unknown function DUF2796 PA257_0996 66d5f61cb9f9c0bb88271e87d1f5904d 71 SUPERFAMILY SSF160059 11 69 2.55E-14 T 12-10-2018 PA257_3338 ea1401ee6552d48b895a29f1af95459b 205 Pfam PF01810 LysE type translocator 17 192 2.0E-17 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PA257_6939 7d10231d8a9ecd933891c1793f1a948d 204 Pfam PF08856 Protein of unknown function (DUF1826) 8 201 6.4E-65 T 12-10-2018 IPR014955 Protein of unknown function DUF1826 PA257_3816 51f87764be437380f9e8a698b5eaba39 108 Pfam PF09919 Uncharacterized conserved protein (DUF2149) 14 101 2.0E-26 T 12-10-2018 IPR018676 Protein of unknown function DUF2149 PA257_0403 61077d2bc66051e9472ef3edfe25bc99 155 Pfam PF10027 Predicted integral membrane protein (DUF2269) 7 154 1.2E-44 T 12-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane PA257_2792 1fe73918a6750925dcbfb2032fd6570e 73 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 2 63 8.3E-25 T 12-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system PA257_4328 242e57b1adef8238c4f3fc664d1c8251 135 Pfam PF10975 Protein of unknown function (DUF2802) 64 130 4.3E-23 T 12-10-2018 IPR021244 Protein of unknown function DUF2802 PA257_6044 f37ed27359093490bd3345b7c1d0251e 250 PIRSF PIRSF028589 1 248 1.4E-47 T 12-10-2018 IPR016893 Protein of unknown function UCP028589 PA257_1112 a5e90a2dd3a8ffaef9df09b9e9205554 244 Pfam PF12679 ABC-2 family transporter protein 64 236 2.8E-8 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 PA257_6919 a0244390bb891223c0b13a011574e513 194 Pfam PF09335 SNARE associated Golgi protein 51 155 3.2E-8 T 12-10-2018 IPR032816 SNARE associated Golgi protein PA257_0135 e5f157e0e38dabc0df4c0865d7a8e83c 357 Pfam PF02628 Cytochrome oxidase assembly protein 13 320 1.3E-82 T 12-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 PA257_4745 5baf72afb6e4d865afd17f72a3ce4db3 105 Pfam PF10052 Protein of unknown function (DUF2288) 8 97 3.7E-31 T 12-10-2018 IPR018741 Protein of unknown function DUF2288 PA257_6718 06344119da127168214d1efdf1c700bc 123 Pfam PF09685 Domain of unknown function (DUF4870) 17 122 4.3E-40 T 12-10-2018 IPR019109 Protein of unknown function DUF4870 PA257_6152 da40b9755dcc6e15498110527127b2ac 138 Pfam PF07769 psiF repeat 23 55 1.1E-19 T 12-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat PA257_6152 da40b9755dcc6e15498110527127b2ac 138 Pfam PF07769 psiF repeat 65 97 6.6E-20 T 12-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat PA257_6152 da40b9755dcc6e15498110527127b2ac 138 Pfam PF07769 psiF repeat 105 137 7.8E-20 T 12-10-2018 IPR011690 Phosphate-starvation-induced PsiF repeat PA257_1813 4e442cec4ebec5287303d52b56571183 250 Pfam PF01925 Sulfite exporter TauE/SafE 10 241 2.3E-40 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PA257_2442 3d87d68b520b850cec3b02b4e46681b7 119 Pfam PF06127 Protein of unknown function (DUF962) 11 84 6.2E-7 T 12-10-2018 IPR009305 Protein of unknown function DUF962