Y89_0001 IPR001957 Chromosomal replication control, initiator DnaA Y89_0001 IPR003593 AAA+ ATPase domain Y89_0001 IPR010921 Trp repressor/replication initiator Y89_0001 IPR013159 Chromosomal replication initiator, DnaA C-terminal Y89_0001 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) Y89_0001 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Y89_0001 IPR020591 Chromosomal replication control, initiator DnaA-like Y89_0001 IPR024633 DnaA N-terminal domain Y89_0001 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0001 IPR038454 Y89_0001 Y89_0002 IPR001001 DNA polymerase III, beta chain Y89_0002 IPR022634 DNA polymerase III, beta chain, N-terminal Y89_0002 IPR022635 DNA polymerase III, beta chain, C-terminal Y89_0002 IPR022637 DNA polymerase III, beta chain, central Y89_0003 IPR001238 DNA-binding, RecF Y89_0003 IPR003395 RecF/RecN/SMC, N-terminal Y89_0003 IPR018078 DNA-binding, RecF, conserved site Y89_0003 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0004 IPR000565 DNA topoisomerase, type IIA, subunit B Y89_0004 IPR001241 DNA topoisomerase, type IIA Y89_0004 IPR002288 DNA gyrase B subunit, C-terminal Y89_0004 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_0004 IPR006171 Toprim domain Y89_0004 IPR011557 DNA gyrase, subunit B Y89_0004 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Y89_0004 IPR013759 DNA topoisomerase, type IIA, central domain Y89_0004 IPR013760 DNA topoisomerase, type IIA-like domain Y89_0004 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_0004 IPR018522 DNA topoisomerase, type IIA, conserved site Y89_0004 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_0004 IPR036890 Y89_0004 Y89_0005 IPR002514 Transposase IS3/IS911family Y89_0005 IPR009057 Homeodomain-like Y89_0009 IPR000330 SNF2-related Y89_0009 IPR001650 Helicase, C-terminal Y89_0009 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_0009 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0009 IPR038718 Y89_0009 Y89_0011 IPR002123 Phospholipid/glycerol acyltransferase Y89_0012 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase Y89_0012 IPR006543 Histidinol-phosphate phosphatase Y89_0012 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Y89_0012 IPR023214 HAD-like domain Y89_0012 IPR036412 Y89_0012 Y89_0013 IPR036909 Y89_0013 Y89_0014 IPR008909 DALR anticodon binding Y89_0014 IPR015944 Glycine-tRNA ligase, beta subunit Y89_0015 IPR002310 Glycine-tRNA ligase, alpha subunit Y89_0016 IPR004597 DNA-3-methyladenine glycosylase I Y89_0016 IPR005019 Methyladenine glycosylase Y89_0016 IPR011257 DNA glycosylase Y89_0017 IPR004960 Bacterial lipid A biosynthesis acyltransferase Y89_0018 IPR009875 PilZ domain Y89_0019 IPR003744 Protein of unknown function DUF165 Y89_0021 IPR011990 Tetratricopeptide-like helical domain Y89_0021 IPR019734 Tetratricopeptide repeat Y89_0022 IPR003148 Regulator of K+ conductance, N-terminal Y89_0022 IPR006036 Potassium uptake protein TrkA Y89_0022 IPR006037 Regulator of K+ conductance, C-terminal Y89_0022 IPR036291 Y89_0022 Y89_0022 IPR036721 Y89_0022 Y89_0023 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p Y89_0023 IPR004573 rRNA small subunit methyltransferase B Y89_0023 IPR006027 NusB/RsmB/TIM44 Y89_0023 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site Y89_0023 IPR023267 RNA (C5-cytosine) methyltransferase Y89_0023 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0023 IPR035926 Y89_0023 Y89_0024 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Y89_0024 IPR002376 Formyl transferase, N-terminal Y89_0024 IPR005793 Formyl transferase, C-terminal Y89_0024 IPR005794 Methionyl-tRNA formyltransferase Y89_0024 IPR011034 Formyl transferase, C-terminal-like Y89_0024 IPR036477 Y89_0024 Y89_0024 IPR037022 Y89_0024 Y89_0025 IPR023635 Peptide deformylase Y89_0025 IPR036821 Y89_0025 Y89_0026 IPR018392 LysM domain Y89_0026 IPR036779 Y89_0026 Y89_0027 IPR003488 DNA recombination-mediator protein A Y89_0028 IPR006070 YrdC-like domain Y89_0028 IPR017945 DHBP synthase RibB-like alpha/beta domain Y89_0028 IPR023535 Threonylcarbamoyl-AMP synthase Y89_0029 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site Y89_0029 IPR011032 GroES (chaperonin 10)-like Y89_0029 IPR013149 Alcohol dehydrogenase, C-terminal Y89_0029 IPR013154 Alcohol dehydrogenase GroES-like Y89_0029 IPR020843 Polyketide synthase, enoylreductase Y89_0029 IPR036291 Y89_0029 Y89_0030 IPR001260 Coproporphyrinogen III oxidase, aerobic Y89_0030 IPR018375 Coproporphyrinogen III oxidase, conserved site Y89_0030 IPR036406 Y89_0030 Y89_0031 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Y89_0031 IPR011342 Shikimate dehydrogenase Y89_0031 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal Y89_0031 IPR022893 Shikimate, quinate/shikimate dehydrogenase Y89_0031 IPR036291 Y89_0031 Y89_0032 IPR008947 Phospholipase C/P1 nuclease domain Y89_0033 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Y89_0033 IPR027304 Trigger factor/SurA domain Y89_0035 IPR002645 STAS domain Y89_0035 IPR011547 Sulphate transporter Y89_0035 IPR036513 Y89_0035 Y89_0036 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain Y89_0036 IPR017783 ABC transporter, choline, substrate-binding protein Y89_0037 IPR000917 Sulfatase Y89_0037 IPR017785 Choline-sulfatase Y89_0037 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_0037 IPR017850 Alkaline-phosphatase-like, core domain Y89_0037 IPR024607 Sulfatase, conserved site Y89_0037 IPR025863 Choline sulfatase enzyme C-terminal domain Y89_0038 IPR000847 Transcription regulator HTH, LysR Y89_0038 IPR005119 LysR, substrate-binding Y89_0038 IPR017786 Transcription factor, choline sulphate-utilisation, putative Y89_0038 IPR036388 Y89_0038 Y89_0038 IPR036390 Y89_0038 Y89_0039 IPR014980 Dopa 4,5-dioxygenase Y89_0039 IPR023389 DOPA-like domain Y89_0040 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_0040 IPR036641 Y89_0040 Y89_0041 IPR000792 Transcription regulator LuxR, C-terminal Y89_0041 IPR001789 Signal transduction response regulator, receiver domain Y89_0041 IPR011006 CheY-like superfamily Y89_0041 IPR016032 Signal transduction response regulator, C-terminal effector Y89_0042 IPR002028 Tryptophan synthase, alpha chain Y89_0042 IPR011060 Ribulose-phosphate binding barrel Y89_0042 IPR013785 Aldolase-type TIM barrel Y89_0042 IPR018204 Tryptophan synthase, alpha chain, active site Y89_0043 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_0043 IPR006653 Tryptophan synthase, beta chain, conserved site Y89_0043 IPR006654 Tryptophan synthase, beta chain Y89_0043 IPR023026 Tryptophan synthase beta chain/beta chain-like Y89_0043 IPR036052 Y89_0043 Y89_0044 IPR000847 Transcription regulator HTH, LysR Y89_0044 IPR005119 LysR, substrate-binding Y89_0044 IPR036388 Y89_0044 Y89_0044 IPR036390 Y89_0044 Y89_0045 IPR009923 Dodecin Y89_0045 IPR025543 Dodecin-like Y89_0045 IPR036694 Y89_0045 Y89_0046 IPR010595 Protein of unknown function DUF1161 Y89_0047 IPR005565 Haemolysin activator HlyB Y89_0047 IPR013686 Polypeptide-transport-associated, ShlB-type Y89_0047 IPR027282 Two partner secretion pathway transporter Y89_0047 IPR035251 Y89_0047 Y89_0048 IPR006914 VENN motif-containing domain Y89_0048 IPR008619 Filamentous haemagglutinin repeat Y89_0048 IPR008638 Filamentous haemagglutinin, N-terminal Y89_0048 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat Y89_0048 IPR011050 Pectin lyase fold/virulence factor Y89_0048 IPR012334 Pectin lyase fold Y89_0048 IPR025157 Haemagluttinin repeat Y89_0049 IPR006915 Domain of unknown function DUF637, haemagglutinin putative Y89_0049 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat Y89_0049 IPR025157 Haemagluttinin repeat Y89_0051 IPR002686 Transposase IS200-like Y89_0051 IPR036515 Y89_0051 Y89_0053 IPR003416 MgtC/SapB/SrpB transporter Y89_0053 IPR025105 Domain of unknown function DUF4010 Y89_0054 IPR003537 Yersinia virulence determinant YopE Y89_0054 IPR003540 ADP ribosyltransferase Y89_0054 IPR014773 Virulence factor YopE uncharacterised domain Y89_0054 IPR037168 Y89_0054 Y89_0055 IPR005534 Curli production assembly/transport component CsgG Y89_0056 IPR014508 Uncharacterised conserved protein, TPR-like repeat Y89_0057 IPR008517 Protein of unknown function DUF799 Y89_0058 IPR001387 Cro/C1-type helix-turn-helix domain Y89_0058 IPR010982 Lambda repressor-like, DNA-binding domain Y89_0059 IPR036440 Y89_0059 Y89_0062 IPR001962 Asparagine synthase Y89_0062 IPR006426 Asparagine synthase, glutamine-hydrolyzing Y89_0062 IPR017932 Glutamine amidotransferase type 2 domain Y89_0062 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_0063 IPR011051 RmlC-like cupin domain Y89_0063 IPR014710 RmlC-like jelly roll fold Y89_0064 IPR002745 Phosphotransferase KptA/Tpt1 Y89_0064 IPR022928 RNA 2'-phosphotransferase KptA, putative Y89_0065 IPR018531 Domain of unknown function DUF1993 Y89_0065 IPR034660 Y89_0065 Y89_0066 IPR000847 Transcription regulator HTH, LysR Y89_0066 IPR005119 LysR, substrate-binding Y89_0066 IPR036388 Y89_0066 Y89_0066 IPR036390 Y89_0066 Y89_0067 IPR001279 Beta-lactamase-like Y89_0067 IPR036866 Y89_0067 Y89_0068 IPR001853 DSBA-like thioredoxin domain Y89_0068 IPR036249 Y89_0068 Y89_0069 IPR003718 OsmC/Ohr family Y89_0069 IPR015946 K homology domain-like, alpha/beta Y89_0069 IPR019904 Peroxiredoxin OsmC Y89_0069 IPR036102 Y89_0069 Y89_0070 IPR010595 Protein of unknown function DUF1161 Y89_0073 IPR014553 Predicted aminopeptidase Y89_0075 IPR023198 Phosphoglycolate phosphatase, domain 2 Y89_0075 IPR023214 HAD-like domain Y89_0075 IPR036412 Y89_0075 Y89_0076 IPR001451 Bacterial transferase hexapeptide repeat Y89_0076 IPR011004 Trimeric LpxA-like Y89_0077 IPR001567 Peptidase M3A/M3B Y89_0077 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Y89_0078 IPR012658 Conserved hypothetical protein CHP02443 Y89_0079 IPR006638 Elongator protein 3/MiaB/NifB Y89_0079 IPR007197 Radical SAM Y89_0079 IPR013785 Aldolase-type TIM barrel Y89_0080 IPR039567 Y89_0080 Y89_0081 IPR005532 Formylglycine-generating sulphatase enzyme domain Y89_0081 IPR016187 C-type lectin fold Y89_0083 IPR003439 ABC transporter-like Y89_0083 IPR003593 AAA+ ATPase domain Y89_0083 IPR017871 ABC transporter, conserved site Y89_0083 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0084 IPR000719 Protein kinase domain Y89_0084 IPR002035 von Willebrand factor, type A Y89_0084 IPR008271 Serine/threonine-protein kinase, active site Y89_0084 IPR011009 Protein kinase-like domain Y89_0084 IPR017441 Protein kinase, ATP binding site Y89_0084 IPR036465 Y89_0084 Y89_0085 IPR001932 Protein phosphatase 2C (PP2C)-like domain Y89_0085 IPR036457 Y89_0085 Y89_0086 IPR017748 Type VI secretion system-associated, BMAA0400 Y89_0086 IPR038225 Y89_0086 Y89_0087 IPR009612 ImcF-related Y89_0087 IPR010623 Domain of unknown function DUF1215 Y89_0087 IPR017731 Type VI secretion system, IcmF Y89_0087 IPR025743 ImcF-related, N-terminal domain Y89_0087 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0088 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_0088 IPR017732 Type IV / VI secretion system, DotU Y89_0088 IPR017733 Type VI secretion system, OmpA/MotB domain Y89_0088 IPR036737 Y89_0088 Y89_0088 IPR038522 Y89_0088 Y89_0089 IPR010263 Protein of unknown function DUF876 Y89_0090 IPR017734 Type VI secretion system, lipoprotein SciN Y89_0090 IPR038706 Y89_0090 Y89_0091 IPR000253 Forkhead-associated (FHA) domain Y89_0091 IPR008984 SMAD/FHA domain Y89_0091 IPR017735 Type VI secretion system, FHA domain-containing protein Y89_0092 IPR010657 ImpA, N-terminal Y89_0092 IPR017740 Type VI secretion system-associated, ImpA Y89_0093 IPR008312 Uncharacterised conserved protein UCP028301 Y89_0094 IPR010269 Protein of unknown function DUF877 Y89_0095 IPR008514 Type VI secretion system effector, Hcp Y89_0095 IPR036624 Y89_0095 Y89_0096 IPR009211 Predicted virulence protein, SciE type Y89_0096 IPR011990 Tetratricopeptide-like helical domain Y89_0097 IPR007048 GpW/Gp25/anti-adapter protein IraD Y89_0097 IPR017737 Type VI secretion system, lysozyme-related protein Y89_0098 IPR010272 Type VI secretion system, VCA0110 Y89_0099 IPR010732 Protein of unknown function DUF1305 Y89_0100 IPR001270 ClpA/B family Y89_0100 IPR003593 AAA+ ATPase domain Y89_0100 IPR003959 ATPase, AAA-type, core Y89_0100 IPR017729 Type VI secretion system, ATPase ClpV1 Y89_0100 IPR018368 ClpA/B, conserved site 1 Y89_0100 IPR019489 Clp ATPase, C-terminal Y89_0100 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0100 IPR036628 Y89_0100 Y89_0101 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Y89_0101 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Y89_0101 IPR037026 Y89_0101 Y89_0104 IPR008727 PAAR motif Y89_0105 IPR014894 Protein DcrB Y89_0105 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Y89_0106 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Y89_0106 IPR010609 Gp5, C-terminal Y89_0106 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Y89_0106 IPR037026 Y89_0106 Y89_0108 IPR018683 Domain of unknown function DUF2169 Y89_0109 IPR016039 Thiolase-like Y89_0110 IPR025425 Domain of unknown function DUF4150 Y89_0110 IPR028917 Tox-GHH2 domain Y89_0112 IPR011959 Conserved hypothetical protein CHP02270 Y89_0112 IPR011989 Armadillo-like helical Y89_0112 IPR016024 Armadillo-type fold Y89_0113 IPR001765 Carbonic anhydrase Y89_0113 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site Y89_0113 IPR036874 Y89_0113 Y89_0114 IPR011547 Sulphate transporter Y89_0116 IPR001505 Copper centre Cu(A) Y89_0116 IPR002429 Cytochrome c oxidase subunit II C-terminal Y89_0116 IPR008972 Cupredoxin Y89_0116 IPR009056 Cytochrome c-like domain Y89_0116 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain Y89_0116 IPR014222 Cytochrome c oxidase, subunit II Y89_0116 IPR036257 Y89_0116 Y89_0116 IPR036909 Y89_0116 Y89_0117 IPR000883 Cytochrome c oxidase subunit I Y89_0117 IPR014241 Cytochrome c oxidase, subunit I bacterial type Y89_0117 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Y89_0117 IPR036927 Y89_0117 Y89_0118 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 Y89_0118 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Y89_0119 IPR000298 Cytochrome c oxidase subunit III domain Y89_0119 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle Y89_0119 IPR035973 Y89_0119 Y89_0120 IPR021313 Protein of unknown function DUF2909 Y89_0121 IPR002994 Surfeit locus 1/Shy1 Y89_0123 IPR003780 COX15/CtaA family Y89_0124 IPR000537 UbiA prenyltransferase family Y89_0124 IPR006369 Protohaem IX farnesyltransferase Y89_0124 IPR030470 Y89_0124 Y89_0125 IPR003782 Copper chaperone SCO1/SenC Y89_0125 IPR036249 Y89_0125 Y89_0126 IPR000182 GNAT domain Y89_0126 IPR016181 Acyl-CoA N-acyltransferase Y89_0127 IPR002577 Helix-turn-helix, HxlR type Y89_0127 IPR036388 Y89_0127 Y89_0127 IPR036390 Y89_0127 Y89_0128 IPR002347 Glucose/ribitol dehydrogenase Y89_0128 IPR036291 Y89_0128 Y89_0129 IPR001853 DSBA-like thioredoxin domain Y89_0129 IPR014440 HCCA isomerase/glutathione S-transferase kappa Y89_0129 IPR036249 Y89_0129 Y89_0130 IPR001991 Sodium:dicarboxylate symporter Y89_0130 IPR018107 Sodium:dicarboxylate symporter, conserved site Y89_0130 IPR023954 C4-dicarboxylate transport protein Y89_0130 IPR036458 Y89_0130 Y89_0131 IPR000524 Transcription regulator HTH, GntR Y89_0131 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_0131 IPR011711 GntR, C-terminal Y89_0131 IPR036388 Y89_0131 Y89_0131 IPR036390 Y89_0131 Y89_0132 IPR000524 Transcription regulator HTH, GntR Y89_0132 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_0132 IPR011711 GntR, C-terminal Y89_0132 IPR036388 Y89_0132 Y89_0132 IPR036390 Y89_0132 Y89_0133 IPR009413 Hemolysin, aegerolysin type Y89_0134 IPR000847 Transcription regulator HTH, LysR Y89_0134 IPR005119 LysR, substrate-binding Y89_0134 IPR036388 Y89_0134 Y89_0134 IPR036390 Y89_0134 Y89_0135 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Y89_0135 IPR035093 Y89_0135 Y89_0136 IPR002145 Ribbon-helix-helix protein, copG Y89_0136 IPR036535 Y89_0136 Y89_0138 IPR004864 Late embryogenesis abundant protein, LEA-14 Y89_0138 IPR013990 Water stress and hypersensitive response domain Y89_0139 IPR004624 PhnA protein Y89_0139 IPR013987 PhnA protein, N-terminal Y89_0139 IPR013988 PhnA protein, C-terminal Y89_0140 IPR003959 ATPase, AAA-type, core Y89_0140 IPR014555 RecF-like Y89_0140 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0141 IPR002514 Transposase IS3/IS911family Y89_0142 IPR002293 Amino acid/polyamine transporter I Y89_0142 IPR004840 Amino acid permease, conserved site Y89_0142 IPR004841 Amino acid permease/ SLC12A domain Y89_0142 IPR011265 GABA permease Y89_0143 IPR010061 Methylmalonate-semialdehyde dehydrogenase Y89_0143 IPR015590 Aldehyde dehydrogenase domain Y89_0143 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_0143 IPR016161 Aldehyde/histidinol dehydrogenase Y89_0143 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_0143 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_0144 IPR011051 RmlC-like cupin domain Y89_0144 IPR013096 Cupin 2, conserved barrel Y89_0144 IPR014710 RmlC-like jelly roll fold Y89_0145 IPR005814 Aminotransferase class-III Y89_0145 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0145 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_0145 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0146 IPR000847 Transcription regulator HTH, LysR Y89_0146 IPR005119 LysR, substrate-binding Y89_0146 IPR036388 Y89_0146 Y89_0146 IPR036390 Y89_0146 Y89_0147 IPR006680 Amidohydrolase 1 Y89_0147 IPR011059 Metal-dependent hydrolase, composite domain Y89_0147 IPR014311 Guanine deaminase Y89_0147 IPR032466 Y89_0147 Y89_0149 IPR003439 ABC transporter-like Y89_0149 IPR003593 AAA+ ATPase domain Y89_0149 IPR017871 ABC transporter, conserved site Y89_0149 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0150 IPR001851 ABC transporter, permease Y89_0151 IPR001851 ABC transporter, permease Y89_0152 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Y89_0152 IPR017559 Alkyl hydroperoxide reductase subunit C Y89_0152 IPR019479 Peroxiredoxin, C-terminal Y89_0152 IPR024706 Peroxiredoxin, AhpC-type Y89_0152 IPR036249 Y89_0152 Y89_0153 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II Y89_0153 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Y89_0153 IPR012081 Alkyl hydroperoxide reductase subunit F Y89_0153 IPR012336 Thioredoxin-like fold Y89_0153 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_0153 IPR036188 Y89_0153 Y89_0153 IPR036249 Y89_0153 Y89_0154 IPR016898 Polyphosphate kinase 2 Y89_0154 IPR022486 Polyphosphate kinase 2, PA0141 Y89_0154 IPR022488 Polyphosphate kinase-2-related Y89_0154 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0155 IPR006680 Amidohydrolase 1 Y89_0155 IPR011059 Metal-dependent hydrolase, composite domain Y89_0155 IPR032466 Y89_0155 Y89_0156 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Y89_0156 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site Y89_0156 IPR036452 Y89_0156 Y89_0157 IPR007710 Nucleoside 2-deoxyribosyltransferase Y89_0158 IPR007710 Nucleoside 2-deoxyribosyltransferase Y89_0159 IPR003760 Basic membrane lipoprotein Y89_0159 IPR028082 Periplasmic binding protein-like I Y89_0160 IPR005123 Oxoglutarate/iron-dependent dioxygenase Y89_0160 IPR026992 Non-haem dioxygenase N-terminal domain Y89_0160 IPR027443 Isopenicillin N synthase-like Y89_0161 IPR001365 Adenosine/AMP deaminase domain Y89_0161 IPR006330 Adenosine/adenine deaminase Y89_0161 IPR028892 Adenine deaminase type 2 Y89_0161 IPR032466 Y89_0161 Y89_0162 IPR007627 RNA polymerase sigma-70 region 2 Y89_0162 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_0162 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_0162 IPR013325 RNA polymerase sigma factor, region 2 Y89_0162 IPR014284 RNA polymerase sigma-70 like domain Y89_0162 IPR036388 Y89_0162 Y89_0163 IPR006860 FecR protein Y89_0163 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_0163 IPR032508 Y89_0163 Y89_0163 IPR032623 Y89_0163 Y89_0164 IPR000531 TonB-dependent receptor, beta-barrel Y89_0164 IPR010105 TonB-dependent siderophore receptor Y89_0164 IPR010917 TonB-dependent receptor, conserved site Y89_0164 IPR011662 Secretin/TonB, short N-terminal Y89_0164 IPR012910 TonB-dependent receptor, plug Y89_0164 IPR036942 Y89_0164 Y89_0164 IPR037066 Y89_0164 Y89_0165 IPR000847 Transcription regulator HTH, LysR Y89_0165 IPR005119 LysR, substrate-binding Y89_0165 IPR012787 Pca transcription factor PcaQ Y89_0165 IPR036388 Y89_0165 Y89_0165 IPR036390 Y89_0165 Y89_0166 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal Y89_0166 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit Y89_0166 IPR015889 Intradiol ring-cleavage dioxygenase, core Y89_0166 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal Y89_0167 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal Y89_0167 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit Y89_0167 IPR015889 Intradiol ring-cleavage dioxygenase, core Y89_0168 IPR005471 Transcription regulator IclR, N-terminal Y89_0168 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR Y89_0168 IPR014757 Transcription regulator IclR, C-terminal Y89_0168 IPR029016 GAF domain-like Y89_0168 IPR036388 Y89_0168 Y89_0168 IPR036390 Y89_0168 Y89_0169 IPR006143 RND efflux pump, membrane fusion protein Y89_0169 IPR032317 Y89_0169 Y89_0170 IPR006143 RND efflux pump, membrane fusion protein Y89_0170 IPR032317 Y89_0170 Y89_0171 IPR001036 Acriflavin resistance protein Y89_0171 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_0172 IPR000847 Transcription regulator HTH, LysR Y89_0172 IPR005119 LysR, substrate-binding Y89_0172 IPR036388 Y89_0172 Y89_0172 IPR036390 Y89_0172 Y89_0174 IPR005318 Outer membrane porin, bacterial Y89_0174 IPR023614 Porin domain Y89_0175 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_0175 IPR009057 Homeodomain-like Y89_0175 IPR011051 RmlC-like cupin domain Y89_0175 IPR014710 RmlC-like jelly roll fold Y89_0175 IPR018060 DNA binding HTH domain, AraC-type Y89_0176 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_0177 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like Y89_0177 IPR036777 Y89_0177 Y89_0178 IPR006042 Xanthine/uracil permease Y89_0178 IPR006043 Xanthine/uracil/vitamin C permease Y89_0178 IPR017588 Xanthine permease Y89_0179 IPR001647 DNA-binding HTH domain, TetR-type Y89_0179 IPR009057 Homeodomain-like Y89_0179 IPR013573 Transcription regulator YcdC, C-terminal Y89_0179 IPR036271 Y89_0179 Y89_0180 IPR001498 Impact, N-terminal Y89_0180 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal Y89_0180 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_0180 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site Y89_0180 IPR035647 Y89_0180 Y89_0180 IPR036956 Y89_0180 Y89_0181 IPR000160 GGDEF domain Y89_0181 IPR029787 Nucleotide cyclase Y89_0182 IPR018530 Domain of unknown function DUF1987 Y89_0184 IPR001932 Protein phosphatase 2C (PP2C)-like domain Y89_0184 IPR003660 HAMP linker domain Y89_0184 IPR036457 Y89_0184 Y89_0185 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Y89_0185 IPR001789 Signal transduction response regulator, receiver domain Y89_0185 IPR008248 Signal transduction response regulator, chemotaxis, CheB Y89_0185 IPR011006 CheY-like superfamily Y89_0185 IPR035909 Y89_0185 Y89_0186 IPR005659 Chemoreceptor glutamine deamidase CheD Y89_0186 IPR011324 Cytotoxic necrotizing factor-like, catalytic Y89_0186 IPR038592 Y89_0186 Y89_0187 IPR000780 MCP methyltransferase, CheR-type Y89_0187 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal Y89_0187 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Y89_0187 IPR026024 Chemotaxis protein methyltransferase CheR Y89_0187 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0187 IPR036804 Y89_0187 Y89_0188 IPR000014 PAS domain Y89_0188 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_0188 IPR004090 Chemotaxis methyl-accepting receptor Y89_0188 IPR035965 Y89_0188 Y89_0189 IPR002545 CheW-like protein Y89_0189 IPR036061 Y89_0189 Y89_0190 IPR002545 CheW-like protein Y89_0190 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_0190 IPR004105 Histidine kinase CheA-like, homodimeric domain Y89_0190 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_0190 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_0190 IPR036061 Y89_0190 Y89_0190 IPR036097 Y89_0190 Y89_0190 IPR036641 Y89_0190 Y89_0190 IPR036890 Y89_0190 Y89_0190 IPR037006 Y89_0190 Y89_0191 IPR001789 Signal transduction response regulator, receiver domain Y89_0191 IPR011006 CheY-like superfamily Y89_0192 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_0192 IPR004090 Chemotaxis methyl-accepting receptor Y89_0193 IPR000847 Transcription regulator HTH, LysR Y89_0193 IPR005119 LysR, substrate-binding Y89_0193 IPR036388 Y89_0193 Y89_0193 IPR036390 Y89_0193 Y89_0194 IPR002347 Glucose/ribitol dehydrogenase Y89_0194 IPR036291 Y89_0194 Y89_0195 IPR000917 Sulfatase Y89_0195 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_0195 IPR017850 Alkaline-phosphatase-like, core domain Y89_0195 IPR024607 Sulfatase, conserved site Y89_0196 IPR003439 ABC transporter-like Y89_0196 IPR003593 AAA+ ATPase domain Y89_0196 IPR017871 ABC transporter, conserved site Y89_0196 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0197 IPR000515 MetI-like domain Y89_0197 IPR035906 Y89_0197 Y89_0198 IPR015168 SsuA/THI5-like Y89_0199 IPR003819 Taurine catabolism dioxygenase TauD/TfdA Y89_0200 IPR004776 Auxin efflux carrier Y89_0201 IPR005318 Outer membrane porin, bacterial Y89_0201 IPR023614 Porin domain Y89_0202 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y89_0202 IPR001011 Acid phosphatase, class A, bacterial Y89_0202 IPR036938 Y89_0202 Y89_0203 IPR000847 Transcription regulator HTH, LysR Y89_0203 IPR005119 LysR, substrate-binding Y89_0203 IPR036388 Y89_0203 Y89_0203 IPR036390 Y89_0203 Y89_0204 IPR000531 TonB-dependent receptor, beta-barrel Y89_0204 IPR010917 TonB-dependent receptor, conserved site Y89_0204 IPR012910 TonB-dependent receptor, plug Y89_0204 IPR036942 Y89_0204 Y89_0205 IPR003819 Taurine catabolism dioxygenase TauD/TfdA Y89_0206 IPR003819 Taurine catabolism dioxygenase TauD/TfdA Y89_0207 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Y89_0207 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Y89_0207 IPR036291 Y89_0207 Y89_0208 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal Y89_0209 IPR012136 NADP transhydrogenase, beta subunit Y89_0209 IPR029035 DHS-like NAD/FAD-binding domain Y89_0209 IPR034300 Y89_0209 Y89_0210 IPR003538 Gram-negative bacterial TonB protein Y89_0210 IPR006260 TonB, C-terminal Y89_0210 IPR037682 Y89_0210 Y89_0211 IPR002898 MotA/TolQ/ExbB proton channel Y89_0212 IPR003400 Biopolymer transport protein ExbD/TolR Y89_0213 IPR021430 Protein of unknown function DUF3079 Y89_0214 IPR010662 Putative hydrolase RBBP9/YdeN Y89_0214 IPR029058 Alpha/Beta hydrolase fold Y89_0215 IPR005777 Malonate decarboxylase, alpha subunit Y89_0215 IPR037171 Y89_0215 Y89_0216 IPR002736 Triphosphoribosyl-dephospho-CoA protein Y89_0216 IPR017555 Triphosphoribosyl-dephospho-CoA synthase Y89_0217 IPR009662 Malonate decarboxylase delta subunit Y89_0217 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein Y89_0218 IPR017556 Malonate decarboxylase, beta subunit Y89_0218 IPR029045 ClpP/crotonase-like domain Y89_0218 IPR034733 Y89_0218 Y89_0219 IPR009648 Malonate decarboxylase gamma subunit Y89_0219 IPR029045 ClpP/crotonase-like domain Y89_0220 IPR017557 Phosphoribosyl-dephospho-CoA transferase Y89_0221 IPR001227 Acyl transferase domain Y89_0221 IPR014043 Acyl transferase Y89_0221 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Y89_0221 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Y89_0221 IPR017554 Malonate decarboxylase, McdH subunit Y89_0221 IPR020801 Polyketide synthase, acyl transferase domain Y89_0221 IPR024925 Malonyl CoA-acyl carrier protein transacylase Y89_0222 IPR004690 Malonate transporter MadL subunit Y89_0223 IPR004691 Malonate/sodium symporter MadM subunit Y89_0223 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal Y89_0224 IPR000847 Transcription regulator HTH, LysR Y89_0224 IPR005119 LysR, substrate-binding Y89_0224 IPR036388 Y89_0224 Y89_0224 IPR036390 Y89_0224 Y89_0225 IPR000847 Transcription regulator HTH, LysR Y89_0225 IPR005119 LysR, substrate-binding Y89_0225 IPR036388 Y89_0225 Y89_0225 IPR036390 Y89_0225 Y89_0226 IPR015590 Aldehyde dehydrogenase domain Y89_0226 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_0226 IPR016161 Aldehyde/histidinol dehydrogenase Y89_0226 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_0226 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_0226 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_0227 IPR002293 Amino acid/polyamine transporter I Y89_0228 IPR005814 Aminotransferase class-III Y89_0228 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0228 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_0228 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0229 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_0230 IPR002220 DapA-like Y89_0230 IPR013785 Aldolase-type TIM barrel Y89_0231 IPR001303 Class II aldolase/adducin N-terminal Y89_0231 IPR036409 Y89_0231 Y89_0232 IPR001387 Cro/C1-type helix-turn-helix domain Y89_0232 IPR010982 Lambda repressor-like, DNA-binding domain Y89_0232 IPR011051 RmlC-like cupin domain Y89_0232 IPR013096 Cupin 2, conserved barrel Y89_0232 IPR014710 RmlC-like jelly roll fold Y89_0233 IPR004165 Coenzyme A transferase family I Y89_0233 IPR037171 Y89_0233 Y89_0234 IPR004165 Coenzyme A transferase family I Y89_0234 IPR037171 Y89_0234 Y89_0235 IPR002155 Thiolase Y89_0235 IPR012793 Beta-ketoadipyl CoA thiolase Y89_0235 IPR016039 Thiolase-like Y89_0235 IPR020610 Thiolase, active site Y89_0235 IPR020613 Thiolase, conserved site Y89_0235 IPR020615 Thiolase, acyl-enzyme intermediate active site Y89_0235 IPR020616 Thiolase, N-terminal Y89_0235 IPR020617 Thiolase, C-terminal Y89_0236 IPR004736 Citrate-proton symport Y89_0236 IPR005828 General substrate transporter Y89_0236 IPR005829 Sugar transporter, conserved site Y89_0236 IPR011701 Major facilitator superfamily Y89_0236 IPR036259 Y89_0236 Y89_0237 IPR000362 Fumarate lyase family Y89_0237 IPR008948 L-Aspartase-like Y89_0237 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase Y89_0237 IPR019468 Adenylosuccinate lyase C-terminal Y89_0237 IPR020557 Fumarate lyase, conserved site Y89_0237 IPR022761 Fumarate lyase, N-terminal Y89_0237 IPR024083 Fumarase/histidase, N-terminal Y89_0238 IPR000073 Alpha/beta hydrolase fold-1 Y89_0238 IPR026968 3-oxoadipate enol-lactonase 1/2 Y89_0238 IPR029058 Alpha/Beta hydrolase fold Y89_0239 IPR003779 Carboxymuconolactone decarboxylase-like Y89_0239 IPR012788 4-carboxymuconolactone decarboxylase Y89_0239 IPR029032 AhpD-like Y89_0240 IPR000847 Transcription regulator HTH, LysR Y89_0240 IPR005119 LysR, substrate-binding Y89_0240 IPR036388 Y89_0240 Y89_0240 IPR036390 Y89_0240 Y89_0241 IPR036777 Y89_0241 Y89_0242 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family Y89_0242 IPR005829 Sugar transporter, conserved site Y89_0242 IPR011701 Major facilitator superfamily Y89_0242 IPR036259 Y89_0242 Y89_0243 IPR005471 Transcription regulator IclR, N-terminal Y89_0243 IPR014757 Transcription regulator IclR, C-terminal Y89_0243 IPR029016 GAF domain-like Y89_0243 IPR036388 Y89_0243 Y89_0243 IPR036390 Y89_0243 Y89_0244 IPR000683 Oxidoreductase, N-terminal Y89_0244 IPR004104 Oxidoreductase, C-terminal Y89_0244 IPR036291 Y89_0244 Y89_0245 IPR013022 Xylose isomerase-like, TIM barrel domain Y89_0245 IPR036237 Y89_0245 Y89_0246 IPR000620 Drug/metabolite transporter Y89_0247 IPR005318 Outer membrane porin, bacterial Y89_0247 IPR023614 Porin domain Y89_0248 IPR011701 Major facilitator superfamily Y89_0248 IPR036259 Y89_0248 Y89_0249 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_0249 IPR013022 Xylose isomerase-like, TIM barrel domain Y89_0249 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_0249 IPR036237 Y89_0249 Y89_0250 IPR001647 DNA-binding HTH domain, TetR-type Y89_0250 IPR009057 Homeodomain-like Y89_0250 IPR036271 Y89_0250 Y89_0251 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal Y89_0251 IPR022893 Shikimate, quinate/shikimate dehydrogenase Y89_0251 IPR036291 Y89_0251 Y89_0252 IPR001874 Dehydroquinase, class II Y89_0252 IPR018509 Dehydroquinase, class II, conserved site Y89_0252 IPR036441 Y89_0252 Y89_0253 IPR004638 Drug resistance transporter EmrB/QacA subfamily Y89_0253 IPR011701 Major facilitator superfamily Y89_0253 IPR036259 Y89_0253 Y89_0254 IPR002938 Monooxygenase, FAD-binding Y89_0254 IPR012733 4-hydroxybenzoate 3-monooxygenase Y89_0254 IPR036188 Y89_0254 Y89_0255 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_0255 IPR009057 Homeodomain-like Y89_0255 IPR011051 RmlC-like cupin domain Y89_0255 IPR014710 RmlC-like jelly roll fold Y89_0255 IPR018060 DNA binding HTH domain, AraC-type Y89_0255 IPR020449 Transcription regulator HTH, AraC- type Y89_0256 IPR000182 GNAT domain Y89_0256 IPR016181 Acyl-CoA N-acyltransferase Y89_0257 IPR000644 CBS domain Y89_0258 IPR020941 Suppressor of fused-like domain Y89_0258 IPR037181 Y89_0258 Y89_0260 IPR000835 MarR-type HTH domain Y89_0260 IPR023187 Transcriptional regulator MarR-type, conserved site Y89_0260 IPR036388 Y89_0260 Y89_0260 IPR036390 Y89_0260 Y89_0261 IPR002830 UbiD decarboxylyase family Y89_0261 IPR032903 Y89_0261 Y89_0263 IPR010699 Protein of unknown function DUF1275 Y89_0265 IPR001584 Integrase, catalytic core Y89_0265 IPR012337 Ribonuclease H-like domain Y89_0267 IPR021531 Protein of unknown function DUF2875 Y89_0268 IPR021692 Protein of unknown function DUF3274 Y89_0268 IPR029058 Alpha/Beta hydrolase fold Y89_0270 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Y89_0270 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Y89_0270 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal Y89_0270 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain Y89_0270 IPR037026 Y89_0270 Y89_0271 IPR008514 Type VI secretion system effector, Hcp Y89_0271 IPR036624 Y89_0271 Y89_0272 IPR006935 Helicase/UvrB domain Y89_0272 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_0272 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0273 IPR009270 Domain of unknown function DUF927 Y89_0273 IPR036977 Y89_0273 Y89_0274 IPR021427 Protein of unknown function DUF3077 Y89_0279 IPR010260 Bacteriophage P4, Orf88 Y89_0280 IPR009061 DNA binding domain, putative Y89_0282 IPR002104 Integrase, catalytic Y89_0282 IPR010998 Integrase, Lambda-type, N-terminal Y89_0282 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_0282 IPR013762 Integrase-like, catalytic core Y89_0282 IPR025166 Domain of unknown function DUF4102 Y89_0282 IPR038488 Y89_0282 Y89_0283 IPR010102 Succinate semialdehyde dehydrogenase Y89_0283 IPR015590 Aldehyde dehydrogenase domain Y89_0283 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_0283 IPR016161 Aldehyde/histidinol dehydrogenase Y89_0283 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_0283 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_0283 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_0284 IPR004632 4-aminobutyrate aminotransferase, bacterial Y89_0284 IPR005814 Aminotransferase class-III Y89_0284 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0284 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_0284 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0285 IPR001789 Signal transduction response regulator, receiver domain Y89_0285 IPR011006 CheY-like superfamily Y89_0285 IPR013976 Metal-dependent hydrolase HDOD Y89_0286 IPR000524 Transcription regulator HTH, GntR Y89_0286 IPR004839 Aminotransferase, class I/classII Y89_0286 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0286 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0286 IPR036388 Y89_0286 Y89_0286 IPR036390 Y89_0286 Y89_0287 IPR003779 Carboxymuconolactone decarboxylase-like Y89_0287 IPR004675 Alkylhydroperoxidase AhpD core Y89_0287 IPR029032 AhpD-like Y89_0288 IPR011051 RmlC-like cupin domain Y89_0288 IPR013096 Cupin 2, conserved barrel Y89_0288 IPR014710 RmlC-like jelly roll fold Y89_0289 IPR007138 Antibiotic biosynthesis monooxygenase-like domain Y89_0289 IPR011008 Dimeric alpha-beta barrel Y89_0290 IPR000847 Transcription regulator HTH, LysR Y89_0290 IPR005119 LysR, substrate-binding Y89_0290 IPR036388 Y89_0290 Y89_0290 IPR036390 Y89_0290 Y89_0291 IPR011701 Major facilitator superfamily Y89_0291 IPR036259 Y89_0291 Y89_0293 IPR000595 Cyclic nucleotide-binding domain Y89_0293 IPR012318 Helix-turn-helix motif, Crp-type Y89_0293 IPR014710 RmlC-like jelly roll fold Y89_0293 IPR018490 Cyclic nucleotide-binding-like Y89_0293 IPR036388 Y89_0293 Y89_0293 IPR036390 Y89_0293 Y89_0294 IPR009305 Protein of unknown function DUF962 Y89_0295 IPR001915 Peptidase M48 Y89_0296 IPR002781 Transmembrane protein TauE like Y89_0297 IPR001845 HTH ArsR-type DNA-binding domain Y89_0297 IPR036388 Y89_0297 Y89_0297 IPR036390 Y89_0297 Y89_0298 IPR003439 ABC transporter-like Y89_0298 IPR003593 AAA+ ATPase domain Y89_0298 IPR005666 Sulphate transport system permease protein 1 Y89_0298 IPR008995 Molybdate/tungstate binding, C-terminal Y89_0298 IPR017871 ABC transporter, conserved site Y89_0298 IPR024765 TOBE-like domain Y89_0298 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0299 IPR000515 MetI-like domain Y89_0299 IPR005667 Sulphate ABC transporter permease protein 2 Y89_0299 IPR011866 Sulphate ABC transporter, permease protein CysW Y89_0299 IPR035906 Y89_0299 Y89_0300 IPR000515 MetI-like domain Y89_0300 IPR005667 Sulphate ABC transporter permease protein 2 Y89_0300 IPR011865 Sulphate ABC transporter, permease protein CysT Y89_0300 IPR035906 Y89_0300 Y89_0301 IPR005669 Thiosulphate/Sulfate-binding protein Y89_0301 IPR034408 Y89_0301 Y89_0302 IPR018743 Protein of unknown function DUF2292 Y89_0303 IPR000014 PAS domain Y89_0303 IPR000160 GGDEF domain Y89_0303 IPR001610 PAC motif Y89_0303 IPR001633 EAL domain Y89_0303 IPR013655 PAS fold-3 Y89_0303 IPR013767 PAS fold Y89_0303 IPR029787 Nucleotide cyclase Y89_0303 IPR035919 Y89_0303 Y89_0303 IPR035965 Y89_0303 Y89_0304 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 Y89_0304 IPR005804 Fatty acid desaturase, type 1 Y89_0305 IPR001734 Sodium/solute symporter Y89_0305 IPR018212 Sodium/solute symporter, conserved site Y89_0305 IPR038377 Y89_0305 Y89_0306 IPR005925 Agmatinase-related Y89_0306 IPR006035 Ureohydrolase Y89_0306 IPR020855 Ureohydrolase, manganese-binding site Y89_0306 IPR023696 Ureohydrolase domain Y89_0307 IPR000847 Transcription regulator HTH, LysR Y89_0307 IPR005119 LysR, substrate-binding Y89_0307 IPR036388 Y89_0307 Y89_0307 IPR036390 Y89_0307 Y89_0308 IPR000014 PAS domain Y89_0308 IPR000160 GGDEF domain Y89_0308 IPR001610 PAC motif Y89_0308 IPR013655 PAS fold-3 Y89_0308 IPR029787 Nucleotide cyclase Y89_0308 IPR035965 Y89_0308 Y89_0309 IPR005318 Outer membrane porin, bacterial Y89_0309 IPR023614 Porin domain Y89_0310 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type Y89_0310 IPR017754 Agmatine deiminase Y89_0311 IPR003010 Carbon-nitrogen hydrolase Y89_0311 IPR017755 N-carbamoylputrescine amidase Y89_0311 IPR036526 Y89_0311 Y89_0312 IPR001647 DNA-binding HTH domain, TetR-type Y89_0312 IPR009057 Homeodomain-like Y89_0313 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Y89_0313 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_0314 IPR008146 Glutamine synthetase, catalytic domain Y89_0314 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_0314 IPR027303 Glutamine synthetase, glycine-rich site Y89_0314 IPR036651 Y89_0314 Y89_0315 IPR011697 Peptidase C26 Y89_0315 IPR029062 Class I glutamine amidotransferase-like Y89_0316 IPR008146 Glutamine synthetase, catalytic domain Y89_0316 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_0316 IPR027303 Glutamine synthetase, glycine-rich site Y89_0316 IPR036651 Y89_0316 Y89_0317 IPR005814 Aminotransferase class-III Y89_0317 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0317 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_0317 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0318 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Y89_0318 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_0319 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Y89_0319 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_0320 IPR003439 ABC transporter-like Y89_0320 IPR003593 AAA+ ATPase domain Y89_0320 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit Y89_0320 IPR008995 Molybdate/tungstate binding, C-terminal Y89_0320 IPR013611 Transport-associated OB, type 2 Y89_0320 IPR017871 ABC transporter, conserved site Y89_0320 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0321 IPR000515 MetI-like domain Y89_0321 IPR035906 Y89_0321 Y89_0322 IPR000515 MetI-like domain Y89_0322 IPR035906 Y89_0322 Y89_0323 IPR002692 Penicillin amidase-like Y89_0323 IPR014395 Penicillin/cephalosporin acylase Y89_0323 IPR023343 Penicillin amidase type, domain1 Y89_0323 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_0324 IPR009057 Homeodomain-like Y89_0324 IPR018060 DNA binding HTH domain, AraC-type Y89_0324 IPR032687 Y89_0324 Y89_0326 IPR036249 Y89_0326 Y89_0327 IPR000073 Alpha/beta hydrolase fold-1 Y89_0327 IPR022742 Putative lysophospholipase Y89_0327 IPR029058 Alpha/Beta hydrolase fold Y89_0329 IPR005123 Oxoglutarate/iron-dependent dioxygenase Y89_0329 IPR006620 Prolyl 4-hydroxylase, alpha subunit Y89_0332 IPR007553 Domain of unknown function DUF523 Y89_0333 IPR000515 MetI-like domain Y89_0333 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_0333 IPR035906 Y89_0333 Y89_0334 IPR001638 Extracellular solute-binding protein, family 3 Y89_0334 IPR018313 Extracellular solute-binding protein, family 3, conserved site Y89_0335 IPR025512 Domain of unknown function DUF4399 Y89_0336 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y89_0336 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Y89_0336 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Y89_0336 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y89_0336 IPR036291 Y89_0336 Y89_0337 IPR004113 FAD-linked oxidase, C-terminal Y89_0337 IPR006094 FAD linked oxidase, N-terminal Y89_0337 IPR016164 FAD-linked oxidase-like, C-terminal Y89_0337 IPR016167 FAD-binding, type 2, subdomain 1 Y89_0337 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_0337 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Y89_0337 IPR036318 Y89_0337 Y89_0338 IPR011234 Fumarylacetoacetase, C-terminal-related Y89_0338 IPR036663 Y89_0338 Y89_0339 IPR009722 SdiA-regulated Y89_0339 IPR011042 Six-bladed beta-propeller, TolB-like Y89_0340 IPR005220 Viral OB-fold, YgiW Y89_0340 IPR036700 Y89_0340 Y89_0341 IPR000286 Histone deacetylase superfamily Y89_0341 IPR023696 Ureohydrolase domain Y89_0341 IPR023801 Histone deacetylase domain Y89_0341 IPR037138 Y89_0341 Y89_0342 IPR002293 Amino acid/polyamine transporter I Y89_0342 IPR004841 Amino acid permease/ SLC12A domain Y89_0343 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Y89_0343 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_0344 IPR000515 MetI-like domain Y89_0344 IPR035906 Y89_0344 Y89_0345 IPR000515 MetI-like domain Y89_0345 IPR035906 Y89_0345 Y89_0346 IPR003439 ABC transporter-like Y89_0346 IPR003593 AAA+ ATPase domain Y89_0346 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit Y89_0346 IPR008995 Molybdate/tungstate binding, C-terminal Y89_0346 IPR013611 Transport-associated OB, type 2 Y89_0346 IPR017871 ABC transporter, conserved site Y89_0346 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0347 IPR009722 SdiA-regulated Y89_0347 IPR011042 Six-bladed beta-propeller, TolB-like Y89_0348 IPR005546 Autotransporter beta-domain Y89_0348 IPR006315 Outer membrane autotransporter barrel Y89_0348 IPR007484 Peptidase M28 Y89_0348 IPR036709 Y89_0348 Y89_0349 IPR010879 Domain of unknown function DUF1508 Y89_0349 IPR036913 Y89_0349 Y89_0350 IPR004788 Ribose 5-phosphate isomerase, type A Y89_0350 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup Y89_0350 IPR037171 Y89_0350 Y89_0351 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Y89_0351 IPR001721 ACT-like domain Y89_0351 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_0351 IPR005787 Threonine dehydratase, biosynthetic Y89_0351 IPR036052 Y89_0351 Y89_0351 IPR038110 Y89_0351 Y89_0352 IPR018729 Protein of unknown function DUF2269, transmembrane Y89_0353 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Y89_0353 IPR025695 DoxX family Y89_0353 IPR036291 Y89_0353 Y89_0354 IPR018729 Protein of unknown function DUF2269, transmembrane Y89_0355 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG Y89_0355 IPR011701 Major facilitator superfamily Y89_0355 IPR036259 Y89_0355 Y89_0356 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial Y89_0356 IPR023214 HAD-like domain Y89_0356 IPR036412 Y89_0356 Y89_0357 IPR000086 NUDIX hydrolase domain Y89_0357 IPR015797 NUDIX hydrolase domain-like Y89_0357 IPR020084 NUDIX hydrolase, conserved site Y89_0357 IPR020476 NUDIX hydrolase Y89_0357 IPR022927 RNA pyrophosphohydrolase RppH Y89_0358 IPR000121 PEP-utilising enzyme, C-terminal Y89_0358 IPR003018 GAF domain Y89_0358 IPR006318 Phosphoenolpyruvate-utilising enzyme Y89_0358 IPR008279 PEP-utilising enzyme, mobile domain Y89_0358 IPR008731 Phosphotransferase system, enzyme I N-terminal Y89_0358 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_0358 IPR023151 PEP-utilising enzyme, conserved site Y89_0358 IPR029016 GAF domain-like Y89_0358 IPR036618 Y89_0358 Y89_0358 IPR036637 Y89_0358 Y89_0359 IPR000014 PAS domain Y89_0359 IPR000160 GGDEF domain Y89_0359 IPR013655 PAS fold-3 Y89_0359 IPR029787 Nucleotide cyclase Y89_0359 IPR035965 Y89_0359 Y89_0360 IPR008551 Protein of unknown function DUF833 Y89_0361 IPR002781 Transmembrane protein TauE like Y89_0362 IPR001640 Prolipoprotein diacylglyceryl transferase Y89_0363 IPR000398 Thymidylate synthase Y89_0363 IPR020940 Thymidylate synthase, active site Y89_0363 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain Y89_0363 IPR036926 Y89_0363 Y89_0364 IPR006342 Methyltransferase FkbM Y89_0364 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0365 IPR006073 GTP binding domain Y89_0365 IPR021871 Protein of unknown function DUF3482 Y89_0365 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0366 IPR021296 Protein of unknown function DUF2868 Y89_0368 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Y89_0368 IPR030395 Y89_0368 Y89_0371 IPR001796 Dihydrofolate reductase domain Y89_0371 IPR012259 Dihydrofolate reductase Y89_0371 IPR017925 Dihydrofolate reductase conserved site Y89_0371 IPR024072 Dihydrofolate reductase-like domain Y89_0372 IPR000979 Phosphodiesterase MJ0936/Vps29 Y89_0372 IPR020935 Phosphodiesterase YfcE, conserved site Y89_0372 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Y89_0372 IPR029052 Metallo-dependent phosphatase-like Y89_0373 IPR006042 Xanthine/uracil permease Y89_0373 IPR006043 Xanthine/uracil/vitamin C permease Y89_0373 IPR017588 Xanthine permease Y89_0374 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase Y89_0374 IPR004404 Dihydroxy-acid dehydratase Y89_0374 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site Y89_0374 IPR037237 Y89_0374 Y89_0375 IPR015947 PUA-like domain Y89_0375 IPR019614 S-adenosylmethionine-dependent methyltransferase Y89_0375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0375 IPR036974 Y89_0375 Y89_0376 IPR002818 ThiJ/PfpI Y89_0376 IPR006286 Peptidase C56, PfpI Y89_0376 IPR029062 Class I glutamine amidotransferase-like Y89_0377 IPR013976 Metal-dependent hydrolase HDOD Y89_0378 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase Y89_0378 IPR010979 Ribosomal protein S13-like, H2TH Y89_0378 IPR012319 DNA glycosylase/AP lyase, catalytic domain Y89_0378 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding Y89_0378 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site Y89_0378 IPR020629 Formamidopyrimidine-DNA glycosylase Y89_0378 IPR035937 Y89_0378 Y89_0379 IPR002123 Phospholipid/glycerol acyltransferase Y89_0381 IPR006597 Sel1-like Y89_0381 IPR011990 Tetratricopeptide-like helical domain Y89_0382 IPR000101 Gamma-glutamyltranspeptidase Y89_0382 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_0383 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_0383 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_0384 IPR001980 Coenzyme A biosynthesis protein Y89_0384 IPR004821 Cytidyltransferase-like domain Y89_0384 IPR013166 Citrate lyase ligase, C-terminal Y89_0384 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_0385 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Y89_0385 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Y89_0385 IPR036188 Y89_0385 Y89_0387 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent Y89_0387 IPR015590 Aldehyde dehydrogenase domain Y89_0387 IPR016161 Aldehyde/histidinol dehydrogenase Y89_0387 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_0387 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_0387 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_0388 IPR001647 DNA-binding HTH domain, TetR-type Y89_0388 IPR009057 Homeodomain-like Y89_0388 IPR025722 Bacterial transcriptional repressor TetR Y89_0389 IPR000182 GNAT domain Y89_0389 IPR016181 Acyl-CoA N-acyltransferase Y89_0390 IPR000073 Alpha/beta hydrolase fold-1 Y89_0390 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site Y89_0390 IPR012020 AB-hydrolase YheT, putative Y89_0390 IPR029058 Alpha/Beta hydrolase fold Y89_0392 IPR004398 RNA methyltransferase, RsmD Y89_0392 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0393 IPR007863 Peptidase M16, C-terminal domain Y89_0393 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Y89_0393 IPR011765 Peptidase M16, N-terminal Y89_0394 IPR007863 Peptidase M16, C-terminal domain Y89_0394 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Y89_0394 IPR011765 Peptidase M16, N-terminal Y89_0395 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Y89_0395 IPR003593 AAA+ ATPase domain Y89_0395 IPR004390 Signal-recognition particle receptor FtsY Y89_0395 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle Y89_0395 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0395 IPR036225 Y89_0395 Y89_0396 IPR003439 ABC transporter-like Y89_0396 IPR003593 AAA+ ATPase domain Y89_0396 IPR005286 Cell division protein FtsE, ATP-binding Y89_0396 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0397 IPR004513 ABC transporter, cell division protein FtsX Y89_0398 IPR000943 RNA polymerase sigma-70 Y89_0398 IPR007627 RNA polymerase sigma-70 region 2 Y89_0398 IPR007630 RNA polymerase sigma-70 region 4 Y89_0398 IPR009042 RNA polymerase sigma-70 region 1.2 Y89_0398 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria Y89_0398 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_0398 IPR013325 RNA polymerase sigma factor, region 2 Y89_0398 IPR014284 RNA polymerase sigma-70 like domain Y89_0400 IPR001264 Glycosyl transferase, family 51 Y89_0400 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase Y89_0400 IPR023346 Lysozyme-like domain Y89_0400 IPR036950 Y89_0400 Y89_0401 IPR006696 Protein of unknown function DUF423 Y89_0402 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Y89_0402 IPR010035 ThiS, thiamine-biosynthesis Y89_0402 IPR012675 Beta-grasp domain Y89_0402 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Y89_0403 IPR008867 Thiazole biosynthesis Y89_0403 IPR013785 Aldolase-type TIM barrel Y89_0403 IPR033983 Y89_0403 Y89_0404 IPR003358 tRNA (guanine-N-7) methyltransferase Y89_0404 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0405 IPR010752 Protein of unknown function DUF1329 Y89_0407 IPR021813 Protein of unknown function DUF3392 Y89_0408 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related Y89_0408 IPR006638 Elongator protein 3/MiaB/NifB Y89_0408 IPR007197 Radical SAM Y89_0408 IPR010723 HemN, C-terminal domain Y89_0408 IPR023404 Radical SAM, alpha/beta horseshoe Y89_0409 IPR002637 Ham1-like protein Y89_0409 IPR020922 Non-canonical purine NTP pyrophosphatase Y89_0409 IPR029001 Inosine triphosphate pyrophosphatase-like Y89_0410 IPR025218 Domain of unknown function DUF4426 Y89_0411 IPR010743 Methionine biosynthesis MetW Y89_0411 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0412 IPR000073 Alpha/beta hydrolase fold-1 Y89_0412 IPR008220 Homoserine acetyltransferase Y89_0412 IPR029058 Alpha/Beta hydrolase fold Y89_0413 IPR022812 Dynamin superfamily Y89_0413 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0414 IPR003746 Protein of unknown function DUF167 Y89_0414 IPR036591 Y89_0414 Y89_0415 IPR003425 Uncharacterised protein family Ycf19 Y89_0416 IPR000304 Pyrroline-5-carboxylate reductase Y89_0416 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_0416 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Y89_0416 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain Y89_0416 IPR036291 Y89_0416 Y89_0417 IPR001608 Alanine racemase, N-terminal Y89_0417 IPR011078 Uncharacterised protein family UPF0001 Y89_0417 IPR029066 PLP-binding barrel Y89_0418 IPR001482 Type II secretion system protein E Y89_0418 IPR003593 AAA+ ATPase domain Y89_0418 IPR006321 Pilus retraction protein PilT Y89_0418 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0419 IPR001482 Type II secretion system protein E Y89_0419 IPR006321 Pilus retraction protein PilT Y89_0419 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0420 IPR002524 Cation efflux protein Y89_0420 IPR027469 Cation efflux protein transmembrane domain Y89_0420 IPR036837 Y89_0420 Y89_0421 IPR007829 TM2 domain Y89_0422 IPR000644 CBS domain Y89_0422 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Y89_0422 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_0422 IPR036052 Y89_0422 Y89_0423 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Y89_0423 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0423 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_0423 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0424 IPR006680 Amidohydrolase 1 Y89_0424 IPR011059 Metal-dependent hydrolase, composite domain Y89_0424 IPR032466 Y89_0424 Y89_0425 IPR002082 Aspartate carbamoyltransferase Y89_0425 IPR006130 Aspartate/ornithine carbamoyltransferase Y89_0425 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Y89_0425 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Y89_0425 IPR036901 Y89_0425 Y89_0426 IPR000836 Phosphoribosyltransferase domain Y89_0426 IPR023050 Bifunctional protein PyrR Y89_0426 IPR029057 Phosphoribosyltransferase-like Y89_0427 IPR005227 Resolvase, holliday junction-type, YqgF-like Y89_0427 IPR006641 YqgF/RNase H-like domain Y89_0427 IPR012337 Ribonuclease H-like domain Y89_0427 IPR037027 Y89_0427 Y89_0428 IPR003774 Protein of unknown function UPF0301 Y89_0429 IPR006260 TonB, C-terminal Y89_0429 IPR037682 Y89_0429 Y89_0430 IPR004215 Prokaryotic glutathione synthetase, N-terminal Y89_0430 IPR004218 Prokaryotic glutathione synthetase, ATP-binding Y89_0430 IPR006284 Glutathione synthetase, prokaryotic Y89_0430 IPR013815 ATP-grasp fold, subdomain 1 Y89_0430 IPR016185 Pre-ATP-grasp domain Y89_0431 IPR001789 Signal transduction response regulator, receiver domain Y89_0431 IPR011006 CheY-like superfamily Y89_0433 IPR002545 CheW-like protein Y89_0433 IPR036061 Y89_0433 Y89_0434 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_0434 IPR004090 Chemotaxis methyl-accepting receptor Y89_0434 IPR029095 NarX-like, N-terminal Y89_0435 IPR000780 MCP methyltransferase, CheR-type Y89_0435 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal Y89_0435 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Y89_0435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0435 IPR036804 Y89_0435 Y89_0436 IPR001789 Signal transduction response regulator, receiver domain Y89_0436 IPR002545 CheW-like protein Y89_0436 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_0436 IPR004105 Histidine kinase CheA-like, homodimeric domain Y89_0436 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_0436 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_0436 IPR011006 CheY-like superfamily Y89_0436 IPR036061 Y89_0436 Y89_0436 IPR036641 Y89_0436 Y89_0436 IPR036890 Y89_0436 Y89_0437 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Y89_0437 IPR008248 Signal transduction response regulator, chemotaxis, CheB Y89_0437 IPR011006 CheY-like superfamily Y89_0437 IPR035909 Y89_0437 Y89_0438 IPR002545 CheW-like protein Y89_0438 IPR036061 Y89_0438 Y89_0439 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_0439 IPR009057 Homeodomain-like Y89_0439 IPR018060 DNA binding HTH domain, AraC-type Y89_0439 IPR018062 HTH domain AraC-type, conserved site Y89_0439 IPR037923 Y89_0439 Y89_0440 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_0442 IPR006700 Ribosomal RNA small subunit methyltransferase E Y89_0442 IPR015947 PUA-like domain Y89_0442 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y89_0442 IPR029028 Alpha/beta knot methyltransferases Y89_0443 IPR005814 Aminotransferase class-III Y89_0443 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA Y89_0443 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0443 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_0443 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0444 IPR001613 Flavin amine oxidase Y89_0444 IPR002937 Amine oxidase Y89_0444 IPR036188 Y89_0444 Y89_0445 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Y89_0445 IPR016174 Di-haem cytochrome, transmembrane Y89_0446 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Y89_0446 IPR023480 Uncharacterised protein family UPF0312/YceI Y89_0446 IPR036761 Y89_0446 Y89_0447 IPR000835 MarR-type HTH domain Y89_0447 IPR036388 Y89_0447 Y89_0447 IPR036390 Y89_0447 Y89_0448 IPR006143 RND efflux pump, membrane fusion protein Y89_0448 IPR032317 Y89_0448 Y89_0449 IPR001036 Acriflavin resistance protein Y89_0449 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Y89_0449 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_0450 IPR003423 Outer membrane efflux protein Y89_0450 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_0451 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site Y89_0451 IPR001650 Helicase, C-terminal Y89_0451 IPR011545 DEAD/DEAH box helicase domain Y89_0451 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_0451 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0451 IPR028622 ATP-dependent RNA helicase RhlE Y89_0453 IPR003171 Methylenetetrahydrofolate reductase Y89_0453 IPR004620 5,10-methylenetetrahydrofolate reductase Y89_0453 IPR029041 FAD-linked oxidoreductase-like Y89_0455 IPR000043 Adenosylhomocysteinase Y89_0455 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Y89_0455 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site Y89_0455 IPR034373 Y89_0455 Y89_0455 IPR036291 Y89_0455 Y89_0456 IPR021333 Protein of unknown function DUF2946 Y89_0457 IPR000531 TonB-dependent receptor, beta-barrel Y89_0457 IPR010105 TonB-dependent siderophore receptor Y89_0457 IPR010917 TonB-dependent receptor, conserved site Y89_0457 IPR012910 TonB-dependent receptor, plug Y89_0457 IPR036942 Y89_0457 Y89_0457 IPR037066 Y89_0457 Y89_0458 IPR005625 PepSY-associated TM helix Y89_0459 IPR001647 DNA-binding HTH domain, TetR-type Y89_0459 IPR009057 Homeodomain-like Y89_0459 IPR013573 Transcription regulator YcdC, C-terminal Y89_0459 IPR036271 Y89_0459 Y89_0460 IPR011059 Metal-dependent hydrolase, composite domain Y89_0460 IPR013108 Amidohydrolase 3 Y89_0460 IPR032466 Y89_0460 Y89_0461 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin Y89_0461 IPR038271 Y89_0461 Y89_0462 IPR005720 Dihydroorotate dehydrogenase domain Y89_0462 IPR013785 Aldolase-type TIM barrel Y89_0462 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_0463 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II Y89_0463 IPR009051 Alpha-helical ferredoxin Y89_0463 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_0463 IPR028261 Dihydroprymidine dehydrogenase domain II Y89_0463 IPR036188 Y89_0463 Y89_0464 IPR006680 Amidohydrolase 1 Y89_0464 IPR011059 Metal-dependent hydrolase, composite domain Y89_0464 IPR011778 Hydantoinase/dihydropyrimidinase Y89_0464 IPR032466 Y89_0464 Y89_0465 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin Y89_0465 IPR038271 Y89_0465 Y89_0466 IPR002933 Peptidase M20 Y89_0466 IPR010158 Amidase, hydantoinase/carbamoylase Y89_0466 IPR011650 Peptidase M20, dimerisation domain Y89_0466 IPR036264 Y89_0466 Y89_0467 IPR003673 CoA-transferase family III Y89_0467 IPR023606 CoA-transferase family III domain Y89_0468 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_0468 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_0468 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_0468 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_0468 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_0468 IPR036250 Y89_0468 Y89_0468 IPR037069 Y89_0468 Y89_0469 IPR000847 Transcription regulator HTH, LysR Y89_0469 IPR005119 LysR, substrate-binding Y89_0469 IPR036388 Y89_0469 Y89_0469 IPR036390 Y89_0469 Y89_0470 IPR006683 Thioesterase superfamily Y89_0470 IPR029069 HotDog domain Y89_0471 IPR001204 Phosphate transporter Y89_0472 IPR002810 NfeD-like, C-terminal domain Y89_0472 IPR029045 ClpP/crotonase-like domain Y89_0473 IPR001107 Band 7 protein Y89_0473 IPR001972 Stomatin family Y89_0473 IPR036013 Y89_0473 Y89_0474 IPR001638 Extracellular solute-binding protein, family 3 Y89_0475 IPR010019 Integral membrane protein, YccS Y89_0475 IPR010020 Integral membrane protein, YccS/YhfK Y89_0475 IPR032692 Y89_0475 Y89_0476 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site Y89_0476 IPR001650 Helicase, C-terminal Y89_0476 IPR005580 DbpA, RNA-binding Y89_0476 IPR011545 DEAD/DEAH box helicase domain Y89_0476 IPR012677 Nucleotide-binding, alpha-beta plait Y89_0476 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_0476 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0477 IPR002059 Cold-shock protein, DNA-binding Y89_0477 IPR011129 Cold shock protein Y89_0477 IPR012156 Cold shock, CspA Y89_0477 IPR012340 Nucleic acid-binding, OB-fold Y89_0477 IPR019844 Cold-shock conserved site Y89_0478 IPR021109 Aspartic peptidase domain Y89_0479 IPR004638 Drug resistance transporter EmrB/QacA subfamily Y89_0479 IPR011701 Major facilitator superfamily Y89_0479 IPR036259 Y89_0479 Y89_0480 IPR001270 ClpA/B family Y89_0480 IPR003593 AAA+ ATPase domain Y89_0480 IPR003959 ATPase, AAA-type, core Y89_0480 IPR004176 Clp, N-terminal Y89_0480 IPR019489 Clp ATPase, C-terminal Y89_0480 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0480 IPR028299 ClpA/B, conserved site 2 Y89_0480 IPR036628 Y89_0480 Y89_0481 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE Y89_0482 IPR002123 Phospholipid/glycerol acyltransferase Y89_0483 IPR021109 Aspartic peptidase domain Y89_0484 IPR001789 Signal transduction response regulator, receiver domain Y89_0484 IPR001867 Signal transduction response regulator, C-terminal Y89_0484 IPR011006 CheY-like superfamily Y89_0484 IPR016032 Signal transduction response regulator, C-terminal effector Y89_0484 IPR036388 Y89_0484 Y89_0485 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_0485 IPR003660 HAMP linker domain Y89_0485 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_0485 IPR029151 Periplasmic sensor domain-like Y89_0485 IPR036097 Y89_0485 Y89_0485 IPR036890 Y89_0485 Y89_0486 IPR010364 Uncharacterised protein family, inner membrane CreD Y89_0488 IPR004045 Glutathione S-transferase, N-terminal Y89_0488 IPR036249 Y89_0488 Y89_0488 IPR036282 Y89_0488 Y89_0489 IPR011217 Streptogramin lyase Y89_0489 IPR015943 WD40/YVTN repeat-like-containing domain Y89_0490 IPR036457 Y89_0490 Y89_0491 IPR000531 TonB-dependent receptor, beta-barrel Y89_0491 IPR010105 TonB-dependent siderophore receptor Y89_0491 IPR011662 Secretin/TonB, short N-terminal Y89_0491 IPR012910 TonB-dependent receptor, plug Y89_0491 IPR036942 Y89_0491 Y89_0491 IPR037066 Y89_0491 Y89_0492 IPR006860 FecR protein Y89_0492 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_0492 IPR032623 Y89_0492 Y89_0493 IPR007627 RNA polymerase sigma-70 region 2 Y89_0493 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_0493 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_0493 IPR013325 RNA polymerase sigma factor, region 2 Y89_0493 IPR014284 RNA polymerase sigma-70 like domain Y89_0493 IPR036388 Y89_0493 Y89_0494 IPR004045 Glutathione S-transferase, N-terminal Y89_0494 IPR036249 Y89_0494 Y89_0494 IPR036282 Y89_0494 Y89_0495 IPR006683 Thioesterase superfamily Y89_0495 IPR029069 HotDog domain Y89_0496 IPR001647 DNA-binding HTH domain, TetR-type Y89_0496 IPR009057 Homeodomain-like Y89_0496 IPR036271 Y89_0496 Y89_0497 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin Y89_0497 IPR038271 Y89_0497 Y89_0498 IPR000847 Transcription regulator HTH, LysR Y89_0498 IPR005119 LysR, substrate-binding Y89_0498 IPR036388 Y89_0498 Y89_0498 IPR036390 Y89_0498 Y89_0499 IPR000182 GNAT domain Y89_0499 IPR016181 Acyl-CoA N-acyltransferase Y89_0500 IPR000847 Transcription regulator HTH, LysR Y89_0500 IPR005119 LysR, substrate-binding Y89_0500 IPR036388 Y89_0500 Y89_0500 IPR036390 Y89_0500 Y89_0501 IPR000073 Alpha/beta hydrolase fold-1 Y89_0501 IPR026968 3-oxoadipate enol-lactonase 1/2 Y89_0501 IPR029058 Alpha/Beta hydrolase fold Y89_0504 IPR001465 Malate synthase Y89_0504 IPR006253 Malate synthase G Y89_0504 IPR011076 Malate synthase-like Y89_0504 IPR023310 Malate synthase G, beta sub-domain Y89_0505 IPR000182 GNAT domain Y89_0505 IPR016181 Acyl-CoA N-acyltransferase Y89_0506 IPR002912 ACT domain Y89_0506 IPR016867 Glycine cleavage repressor GcvR Y89_0507 IPR000620 Drug/metabolite transporter Y89_0507 IPR004626 RarD protein Y89_0508 IPR002575 Aminoglycoside phosphotransferase Y89_0508 IPR011009 Protein kinase-like domain Y89_0508 IPR032882 Y89_0508 Y89_0509 IPR000847 Transcription regulator HTH, LysR Y89_0509 IPR003725 Molybdenum-binding protein, N-terminal Y89_0509 IPR004606 Molybdenum-pterin binding Y89_0509 IPR005116 Transport-associated OB, type 1 Y89_0509 IPR008995 Molybdate/tungstate binding, C-terminal Y89_0509 IPR016462 Molybdate-dependent transcriptional regulator, ModE Y89_0509 IPR036388 Y89_0509 Y89_0509 IPR036390 Y89_0509 Y89_0510 IPR017028 Uncharacterised conserved protein UCP034456 Y89_0510 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein Y89_0511 IPR000836 Phosphoribosyltransferase domain Y89_0511 IPR029057 Phosphoribosyltransferase-like Y89_0513 IPR000847 Transcription regulator HTH, LysR Y89_0513 IPR005119 LysR, substrate-binding Y89_0513 IPR036388 Y89_0513 Y89_0513 IPR036390 Y89_0513 Y89_0514 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF Y89_0514 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Y89_0515 IPR000089 Biotin/lipoyl attachment Y89_0515 IPR001249 Acetyl-CoA biotin carboxyl carrier Y89_0515 IPR011053 Single hybrid motif Y89_0516 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Y89_0516 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal Y89_0516 IPR005482 Biotin carboxylase, C-terminal Y89_0516 IPR011054 Rudiment single hybrid motif Y89_0516 IPR016185 Pre-ATP-grasp domain Y89_0517 IPR003833 Allophanate hydrolase subunit 1 Y89_0517 IPR029000 Cyclophilin-like domain Y89_0518 IPR003778 Allophanate hydrolase subunit 2 Y89_0518 IPR029000 Cyclophilin-like domain Y89_0519 IPR000259 Fimbrial-type adhesion domain Y89_0519 IPR008966 Adhesion domain Y89_0519 IPR036937 Y89_0519 Y89_0520 IPR001829 Pili assembly chaperone, bacterial Y89_0520 IPR008962 PapD-like Y89_0520 IPR013783 Immunoglobulin-like fold Y89_0520 IPR016147 PapD, N-terminal, bacterial Y89_0520 IPR016148 Pili assembly chaperone, C-terminal domain Y89_0520 IPR036316 Y89_0520 Y89_0521 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB Y89_0521 IPR006638 Elongator protein 3/MiaB/NifB Y89_0521 IPR007197 Radical SAM Y89_0521 IPR010722 Biotin and thiamin synthesis-associated domain Y89_0521 IPR013785 Aldolase-type TIM barrel Y89_0521 IPR024177 Biotin synthase Y89_0522 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Y89_0522 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type Y89_0522 IPR004839 Aminotransferase, class I/classII Y89_0522 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0522 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_0522 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0522 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria Y89_0523 IPR000073 Alpha/beta hydrolase fold-1 Y89_0523 IPR029058 Alpha/Beta hydrolase fold Y89_0524 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC Y89_0524 IPR013216 Methyltransferase type 11 Y89_0524 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0525 IPR004472 Dethiobiotin synthase BioD Y89_0525 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0527 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_0527 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_0527 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_0527 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_0527 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Y89_0527 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Y89_0527 IPR036250 Y89_0527 Y89_0527 IPR037069 Y89_0527 Y89_0528 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_0528 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_0528 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_0528 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_0528 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Y89_0528 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Y89_0528 IPR036250 Y89_0528 Y89_0528 IPR037069 Y89_0528 Y89_0529 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_0529 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_0529 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_0529 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_0529 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Y89_0529 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Y89_0529 IPR036250 Y89_0529 Y89_0529 IPR037069 Y89_0529 Y89_0530 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain Y89_0530 IPR009056 Cytochrome c-like domain Y89_0530 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain Y89_0530 IPR036909 Y89_0530 Y89_0531 IPR000878 Tetrapyrrole methylase Y89_0531 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Y89_0531 IPR006366 Uroporphyrin-III C-methyltransferase Y89_0531 IPR014776 Tetrapyrrole methylase, subdomain 2 Y89_0531 IPR014777 Tetrapyrrole methylase, subdomain 1 Y89_0531 IPR035996 Y89_0531 Y89_0532 IPR006638 Elongator protein 3/MiaB/NifB Y89_0532 IPR007197 Radical SAM Y89_0532 IPR013785 Aldolase-type TIM barrel Y89_0532 IPR017200 Radical SAM coenzyme PQQ biosynthesis protein E/heme D1 biosynthesis NirJ Y89_0532 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ Y89_0534 IPR036388 Y89_0534 Y89_0536 IPR000485 AsnC-type HTH domain Y89_0536 IPR019888 Transcription regulator AsnC-type Y89_0536 IPR036388 Y89_0536 Y89_0537 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain Y89_0537 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain Y89_0538 IPR009056 Cytochrome c-like domain Y89_0538 IPR036909 Y89_0538 Y89_0539 IPR002324 Cytochrome c, class ID Y89_0539 IPR009056 Cytochrome c-like domain Y89_0539 IPR036909 Y89_0539 Y89_0540 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain Y89_0540 IPR009056 Cytochrome c-like domain Y89_0540 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain Y89_0540 IPR036909 Y89_0540 Y89_0541 IPR011704 ATPase, dynein-related, AAA domain Y89_0541 IPR013615 CbbQ/NirQ/NorQ, C-terminal Y89_0541 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0542 IPR000298 Cytochrome c oxidase subunit III domain Y89_0542 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle Y89_0542 IPR035973 Y89_0542 Y89_0543 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes Y89_0544 IPR009056 Cytochrome c-like domain Y89_0544 IPR036909 Y89_0544 Y89_0546 IPR002035 von Willebrand factor, type A Y89_0546 IPR036465 Y89_0546 Y89_0548 IPR000595 Cyclic nucleotide-binding domain Y89_0548 IPR012318 Helix-turn-helix motif, Crp-type Y89_0548 IPR014710 RmlC-like jelly roll fold Y89_0548 IPR018490 Cyclic nucleotide-binding-like Y89_0548 IPR036388 Y89_0548 Y89_0548 IPR036390 Y89_0548 Y89_0549 IPR000847 Transcription regulator HTH, LysR Y89_0549 IPR005119 LysR, substrate-binding Y89_0549 IPR036388 Y89_0549 Y89_0549 IPR036390 Y89_0549 Y89_0550 IPR005163 3-alpha domain Y89_0550 IPR005302 Molybdenum cofactor sulfurase, C-terminal Y89_0550 IPR011037 Pyruvate kinase-like, insert domain Y89_0552 IPR005814 Aminotransferase class-III Y89_0552 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0552 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_0552 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0553 IPR017926 Glutamine amidotransferase Y89_0553 IPR029062 Class I glutamine amidotransferase-like Y89_0555 IPR000014 PAS domain Y89_0555 IPR000792 Transcription regulator LuxR, C-terminal Y89_0555 IPR016032 Signal transduction response regulator, C-terminal effector Y89_0555 IPR035965 Y89_0555 Y89_0555 IPR036388 Y89_0555 Y89_0556 IPR006076 FAD dependent oxidoreductase Y89_0556 IPR036188 Y89_0556 Y89_0557 IPR001387 Cro/C1-type helix-turn-helix domain Y89_0557 IPR010982 Lambda repressor-like, DNA-binding domain Y89_0557 IPR011051 RmlC-like cupin domain Y89_0557 IPR013096 Cupin 2, conserved barrel Y89_0557 IPR014710 RmlC-like jelly roll fold Y89_0558 IPR007621 TPM domain Y89_0559 IPR007156 LemA Y89_0559 IPR023353 LemA-like domain Y89_0560 IPR003752 Disulphide bond formation protein DsbB/BdbC Y89_0560 IPR022920 Disulphide bond formation protein DsbB Y89_0560 IPR023380 Disulphide bond formation protein DsbB-like domain Y89_0561 IPR000620 Drug/metabolite transporter Y89_0562 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein Y89_0562 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain Y89_0563 IPR002321 Cytochrome c, class II Y89_0563 IPR010980 Cytochrome c/b562 Y89_0563 IPR012127 Cytochrome c prime Y89_0564 IPR009468 Protein of unknown function DUF1090 Y89_0565 IPR010126 Esterase, PHB depolymerase Y89_0565 IPR029058 Alpha/Beta hydrolase fold Y89_0566 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Y89_0566 IPR029052 Metallo-dependent phosphatase-like Y89_0567 IPR001221 Phenol hydroxylase reductase Y89_0567 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_0567 IPR013112 FAD-binding 8 Y89_0567 IPR013130 Ferric reductase transmembrane component-like domain Y89_0567 IPR017938 Riboflavin synthase-like beta-barrel Y89_0567 IPR039261 Y89_0567 Y89_0568 IPR002133 S-adenosylmethionine synthetase Y89_0568 IPR022628 S-adenosylmethionine synthetase, N-terminal Y89_0568 IPR022629 S-adenosylmethionine synthetase, central domain Y89_0568 IPR022630 S-adenosylmethionine synthetase, C-terminal Y89_0568 IPR022631 S-adenosylmethionine synthetase, conserved site Y89_0568 IPR022636 S-adenosylmethionine synthetase superfamily Y89_0569 IPR001845 HTH ArsR-type DNA-binding domain Y89_0569 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0569 IPR036388 Y89_0569 Y89_0569 IPR036390 Y89_0569 Y89_0570 IPR005474 Transketolase, N-terminal Y89_0570 IPR005475 Transketolase-like, pyrimidine-binding domain Y89_0570 IPR005478 Transketolase, bacterial-like Y89_0570 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Y89_0570 IPR020826 Transketolase binding site Y89_0570 IPR029061 Thiamin diphosphate-binding fold Y89_0570 IPR033248 Y89_0570 Y89_0572 IPR013022 Xylose isomerase-like, TIM barrel domain Y89_0572 IPR026040 Hydroxypyruvate isomerase-like Y89_0572 IPR036237 Y89_0572 Y89_0573 IPR006422 D-erythrose-4-phosphate dehydrogenase Y89_0573 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain Y89_0573 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain Y89_0573 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family Y89_0573 IPR036291 Y89_0573 Y89_0574 IPR001576 Phosphoglycerate kinase Y89_0574 IPR015824 Phosphoglycerate kinase, N-terminal Y89_0574 IPR015911 Phosphoglycerate kinase, conserved site Y89_0574 IPR036043 Y89_0574 Y89_0576 IPR018660 C-type lysozyme, inhibitor Y89_0576 IPR036328 Y89_0576 Y89_0577 IPR000771 Ketose-bisphosphate aldolase, class-II Y89_0577 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype Y89_0577 IPR013785 Aldolase-type TIM barrel Y89_0579 IPR032710 Y89_0579 Y89_0579 IPR037401 Y89_0579 Y89_0580 IPR013216 Methyltransferase type 11 Y89_0580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0581 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Y89_0581 IPR023166 HI0933 insert-like domain Y89_0581 IPR036188 Y89_0581 Y89_0583 IPR006439 HAD hydrolase, subfamily IA Y89_0583 IPR023198 Phosphoglycolate phosphatase, domain 2 Y89_0583 IPR023214 HAD-like domain Y89_0583 IPR036412 Y89_0583 Y89_0584 IPR008523 Lactobacillus phage LBR48, DUF805 Y89_0585 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_0585 IPR009057 Homeodomain-like Y89_0585 IPR011051 RmlC-like cupin domain Y89_0585 IPR014710 RmlC-like jelly roll fold Y89_0585 IPR018060 DNA binding HTH domain, AraC-type Y89_0585 IPR018062 HTH domain AraC-type, conserved site Y89_0585 IPR020449 Transcription regulator HTH, AraC- type Y89_0586 IPR003779 Carboxymuconolactone decarboxylase-like Y89_0586 IPR004675 Alkylhydroperoxidase AhpD core Y89_0586 IPR029032 AhpD-like Y89_0588 IPR000612 Proteolipid membrane potential modulator Y89_0591 IPR018958 SMI1/KNR4 like domain Y89_0591 IPR037883 Y89_0591 Y89_0592 IPR025402 Domain of unknown function DUF4375 Y89_0593 IPR031161 Y89_0593 Y89_0594 IPR011528 Nuclease-related domain, NERD Y89_0595 IPR003812 Fido domain Y89_0595 IPR025230 Domain of unknown function DUF4172 Y89_0595 IPR036388 Y89_0595 Y89_0595 IPR036390 Y89_0595 Y89_0595 IPR036597 Y89_0595 Y89_0596 IPR003593 AAA+ ATPase domain Y89_0596 IPR003959 ATPase, AAA-type, core Y89_0596 IPR003960 ATPase, AAA-type, conserved site Y89_0596 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0597 IPR000209 Peptidase S8/S53 domain Y89_0597 IPR036852 Y89_0597 Y89_0599 IPR003593 AAA+ ATPase domain Y89_0599 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0601 IPR001584 Integrase, catalytic core Y89_0601 IPR001598 Transposase, IS30, conserved site Y89_0601 IPR009057 Homeodomain-like Y89_0601 IPR012337 Ribonuclease H-like domain Y89_0601 IPR025246 Transposase IS30-like HTH domain Y89_0601 IPR036397 Y89_0601 Y89_0602 IPR001584 Integrase, catalytic core Y89_0602 IPR012337 Ribonuclease H-like domain Y89_0602 IPR025948 HTH-like domain Y89_0602 IPR036397 Y89_0602 Y89_0607 IPR012933 HicA mRNA interferase family Y89_0607 IPR038570 Y89_0607 Y89_0608 IPR031807 Y89_0608 Y89_0608 IPR035069 Y89_0608 Y89_0614 IPR011083 Phage tail collar domain Y89_0614 IPR022225 Phage tail fibre protein Y89_0614 IPR037053 Y89_0614 Y89_0615 IPR006521 Tail protein I Y89_0616 IPR006949 Baseplate assembly protein J-like, predicted Y89_0617 IPR019697 Bacteriophage HP1, Orf28 Y89_0618 IPR010090 Phage tail tape measure protein Y89_0619 IPR024406 Protein of unknown function DUF2765 Y89_0620 IPR004929 Bacteriophage Rz lysis protein Y89_0621 IPR002196 Glycoside hydrolase, family 24 Y89_0621 IPR023346 Lysozyme-like domain Y89_0623 IPR000962 Zinc finger, DksA/TraR C4-type Y89_0624 IPR019708 Bacteriophage HP1, Orf24 Y89_0625 IPR019694 Bacteriophage HP1, Orf23 Y89_0627 IPR009678 Bacteriophage tail completion protein R Y89_0628 IPR009225 Bacteriophage head completion protein GpL Y89_0629 IPR010270 Bacteriophage P2, GpM Y89_0629 IPR011990 Tetratricopeptide-like helical domain Y89_0629 IPR019734 Tetratricopeptide repeat Y89_0630 IPR006441 Bacteriophage P2, GpN, major capsid Y89_0631 IPR009228 Capsid scaffolding protein GpO Y89_0632 IPR004921 Terminase, large subunit Y89_0632 IPR010332 ATPase terminase subunit, putative Y89_0632 IPR035421 Y89_0632 Y89_0637 IPR005569 Arc-like DNA binding Y89_0637 IPR010985 Ribbon-helix-helix Y89_0637 IPR013321 Arc-type ribbon-helix-helix Y89_0644 IPR001387 Cro/C1-type helix-turn-helix domain Y89_0644 IPR010982 Lambda repressor-like, DNA-binding domain Y89_0646 IPR000477 Reverse transcriptase domain Y89_0646 IPR002711 HNH endonuclease Y89_0646 IPR003615 HNH nuclease Y89_0646 IPR013597 Group II intron, maturase-specific Y89_0646 IPR025960 Reverse transcriptase, N-terminal domain Y89_0646 IPR030931 Y89_0646 Y89_0647 IPR000014 PAS domain Y89_0647 IPR000160 GGDEF domain Y89_0647 IPR001610 PAC motif Y89_0647 IPR001633 EAL domain Y89_0647 IPR001638 Extracellular solute-binding protein, family 3 Y89_0647 IPR013655 PAS fold-3 Y89_0647 IPR029787 Nucleotide cyclase Y89_0647 IPR035919 Y89_0647 Y89_0647 IPR035965 Y89_0647 Y89_0648 IPR000943 RNA polymerase sigma-70 Y89_0648 IPR007127 RNA polymerase sigma factor 70, region 1.1 Y89_0648 IPR007624 RNA polymerase sigma-70 region 3 Y89_0648 IPR007627 RNA polymerase sigma-70 region 2 Y89_0648 IPR007630 RNA polymerase sigma-70 region 4 Y89_0648 IPR007631 RNA polymerase sigma factor 70, non-essential domain Y89_0648 IPR009042 RNA polymerase sigma-70 region 1.2 Y89_0648 IPR012760 RNA polymerase sigma factor RpoD, C-terminal Y89_0648 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_0648 IPR013325 RNA polymerase sigma factor, region 2 Y89_0648 IPR014284 RNA polymerase sigma-70 like domain Y89_0648 IPR028630 RNA polymerase sigma factor RpoD Y89_0648 IPR036388 Y89_0648 Y89_0649 IPR002694 Zinc finger, CHC2-type Y89_0649 IPR006171 Toprim domain Y89_0649 IPR006295 DNA primase, DnaG Y89_0649 IPR013173 DNA primase DnaG, DnaB-binding domain Y89_0649 IPR013264 DNA primase, catalytic core, N-terminal Y89_0649 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Y89_0649 IPR019475 DNA primase, DnaB-helicase binding domain Y89_0649 IPR030846 Y89_0649 Y89_0649 IPR036977 Y89_0649 Y89_0649 IPR037068 Y89_0649 Y89_0650 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related Y89_0650 IPR019004 Uncharacterised domain YOR215C, mitochondrial Y89_0650 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Y89_0651 IPR001911 Ribosomal protein S21 Y89_0651 IPR018278 Ribosomal protein S21, conserved site Y89_0651 IPR038380 Y89_0651 Y89_0652 IPR000905 Gcp-like domain Y89_0652 IPR017861 Kae1/YgjD family Y89_0652 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD Y89_0653 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY Y89_0654 IPR006156 Dihydroneopterin aldolase Y89_0654 IPR006157 Dihydroneopterin aldolase/epimerase domain Y89_0655 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK Y89_0655 IPR035907 Y89_0655 Y89_0656 IPR002646 Poly A polymerase, head domain Y89_0656 IPR006674 HD domain Y89_0656 IPR012006 tRNA nucleotidyltransferase, proteobacteria Y89_0656 IPR032828 Y89_0656 Y89_0657 IPR025411 Domain of unknown function DUF4136 Y89_0658 IPR007390 Sporulation stage V, protein R Y89_0659 IPR006698 Thermus phage phiYS40, Orf56 Y89_0660 IPR010650 PrkA C-terminal domain Y89_0660 IPR013153 PrkA AAA domain Y89_0660 IPR016230 Serine-protein kinase, PrkA Y89_0660 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0661 IPR001763 Rhodanese-like domain Y89_0661 IPR023695 Thiosulfate sulfurtransferase, bacterial Y89_0661 IPR036873 Y89_0661 Y89_0662 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) Y89_0662 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Y89_0662 IPR029052 Metallo-dependent phosphatase-like Y89_0663 IPR007474 ApaG domain Y89_0663 IPR023065 Uncharacterised protein family ApaG Y89_0663 IPR036767 Y89_0663 Y89_0664 IPR001737 Ribosomal RNA adenine methylase transferase Y89_0664 IPR011530 Ribosomal RNA adenine dimethylase Y89_0664 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site Y89_0664 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal Y89_0664 IPR023165 rRNA adenine dimethylase-like Y89_0664 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0665 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA Y89_0665 IPR037510 Y89_0665 Y89_0666 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Y89_0666 IPR015391 SurA N-terminal Y89_0666 IPR023034 Peptidyl-prolyl isomerase SurA Y89_0666 IPR027304 Trigger factor/SurA domain Y89_0667 IPR005653 Organic solvent tolerance-like, N-terminal Y89_0667 IPR007543 Organic solvent tolerance protein, C-terminal Y89_0667 IPR020889 Lipopolysaccharide assembly, LptD Y89_0668 IPR000477 Reverse transcriptase domain Y89_0668 IPR002711 HNH endonuclease Y89_0668 IPR003615 HNH nuclease Y89_0668 IPR013597 Group II intron, maturase-specific Y89_0670 IPR002575 Aminoglycoside phosphotransferase Y89_0670 IPR011009 Protein kinase-like domain Y89_0671 IPR005835 Nucleotidyl transferase Y89_0671 IPR029044 Nucleotide-diphospho-sugar transferases Y89_0672 IPR001623 DnaJ domain Y89_0672 IPR029024 TerB-like Y89_0672 IPR036869 Y89_0672 Y89_0673 IPR022529 Protein of unknown function DUF3530 Y89_0673 IPR029058 Alpha/Beta hydrolase fold Y89_0674 IPR000014 PAS domain Y89_0674 IPR001610 PAC motif Y89_0674 IPR001638 Extracellular solute-binding protein, family 3 Y89_0674 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_0674 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_0674 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Y89_0674 IPR013655 PAS fold-3 Y89_0674 IPR013656 PAS fold-4 Y89_0674 IPR035965 Y89_0674 Y89_0674 IPR036890 Y89_0674 Y89_0675 IPR000792 Transcription regulator LuxR, C-terminal Y89_0675 IPR001789 Signal transduction response regulator, receiver domain Y89_0675 IPR011006 CheY-like superfamily Y89_0675 IPR016032 Signal transduction response regulator, C-terminal effector Y89_0676 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_0677 IPR003439 ABC transporter-like Y89_0677 IPR003593 AAA+ ATPase domain Y89_0677 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit Y89_0677 IPR008995 Molybdate/tungstate binding, C-terminal Y89_0677 IPR013611 Transport-associated OB, type 2 Y89_0677 IPR017871 ABC transporter, conserved site Y89_0677 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0678 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_0679 IPR000515 MetI-like domain Y89_0679 IPR035906 Y89_0679 Y89_0680 IPR000515 MetI-like domain Y89_0680 IPR035906 Y89_0680 Y89_0681 IPR000056 Ribulose-phosphate 3-epimerase-like Y89_0681 IPR011060 Ribulose-phosphate binding barrel Y89_0681 IPR013785 Aldolase-type TIM barrel Y89_0681 IPR026019 Ribulose-phosphate 3-epimerase Y89_0682 IPR006346 2-phosphoglycolate phosphatase, prokaryotic Y89_0682 IPR006439 HAD hydrolase, subfamily IA Y89_0682 IPR023198 Phosphoglycolate phosphatase, domain 2 Y89_0682 IPR023214 HAD-like domain Y89_0682 IPR036412 Y89_0682 Y89_0682 IPR037512 Y89_0682 Y89_0683 IPR005256 Anthranilate synthase component I, PabB-like Y89_0683 IPR005801 ADC synthase Y89_0683 IPR006805 Anthranilate synthase component I, N-terminal Y89_0683 IPR015890 Chorismate binding, C-terminal Y89_0683 IPR019999 Anthranilate synthase component I - like Y89_0684 IPR020518 Transcription regulator PrtN Y89_0685 IPR001387 Cro/C1-type helix-turn-helix domain Y89_0685 IPR010982 Lambda repressor-like, DNA-binding domain Y89_0685 IPR015927 Peptidase S24/S26A/S26B/S26C Y89_0685 IPR036286 Y89_0685 Y89_0689 IPR032128 Y89_0689 Y89_0691 IPR006531 Gp5 N-terminal Y89_0691 IPR013046 Bacteriophage Mu/P2, baseplate assembly Y89_0691 IPR037026 Y89_0691 Y89_0692 IPR007048 GpW/Gp25/anti-adapter protein IraD Y89_0693 IPR006949 Baseplate assembly protein J-like, predicted Y89_0693 IPR014507 Baseplate assembly protein J, predicted Y89_0694 IPR006521 Tail protein I Y89_0695 IPR022225 Phage tail fibre protein Y89_0696 IPR020287 Tail sheath protein, C-terminal domain Y89_0696 IPR035089 Y89_0696 Y89_0697 IPR006498 Bacteriophage P2, FII, major tail tube protein Y89_0698 IPR019289 Bacteriophage tail protein Gp41, putative Y89_0700 IPR009734 Myoviridae, GpU Y89_0700 IPR014458 Uncharacterised protein family, phage P2-GpU-fusion Y89_0701 IPR008861 Bacteriophage P2, GpX Y89_0701 IPR036779 Y89_0701 Y89_0703 IPR000726 Glycoside hydrolase, family 19, catalytic Y89_0703 IPR023346 Lysozyme-like domain Y89_0706 IPR032495 Y89_0706 Y89_0707 IPR024410 Protein of unknown function DUF3647 Y89_0709 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal Y89_0710 IPR010265 Bacteriophage lambda, GpM, minor tail Y89_0711 IPR006487 Bacteriophage lambda, GpL, minor tail Y89_0712 IPR000064 Endopeptidase, NLPC/P60 domain Y89_0712 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain Y89_0712 IPR028090 JAB domain, prokaryotic Y89_0712 IPR038765 Y89_0712 Y89_0714 IPR013783 Immunoglobulin-like fold Y89_0714 IPR015406 Domain of unknown function DUF1983 Y89_0714 IPR032876 Y89_0714 Y89_0714 IPR036116 Y89_0714 Y89_0722 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain Y89_0722 IPR017926 Glutamine amidotransferase Y89_0722 IPR029062 Class I glutamine amidotransferase-like Y89_0723 IPR000312 Glycosyl transferase, family 3 Y89_0723 IPR005940 Anthranilate phosphoribosyl transferase Y89_0723 IPR017459 Glycosyl transferase family 3, N-terminal domain Y89_0723 IPR035902 Y89_0723 Y89_0723 IPR036320 Y89_0723 Y89_0724 IPR001468 Indole-3-glycerol phosphate synthase, conserved site Y89_0724 IPR011060 Ribulose-phosphate binding barrel Y89_0724 IPR013785 Aldolase-type TIM barrel Y89_0724 IPR013798 Indole-3-glycerol phosphate synthase Y89_0725 IPR000595 Cyclic nucleotide-binding domain Y89_0725 IPR012318 Helix-turn-helix motif, Crp-type Y89_0725 IPR014710 RmlC-like jelly roll fold Y89_0725 IPR018335 Transcription regulator HTH, Crp-type, conserved site Y89_0725 IPR018488 Cyclic nucleotide-binding, conserved site Y89_0725 IPR018490 Cyclic nucleotide-binding-like Y89_0725 IPR036388 Y89_0725 Y89_0725 IPR036390 Y89_0725 Y89_0726 IPR003718 OsmC/Ohr family Y89_0726 IPR015946 K homology domain-like, alpha/beta Y89_0726 IPR036102 Y89_0726 Y89_0727 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic Y89_0727 IPR009165 S-adenosylmethionine decarboxylase, bacterial Y89_0727 IPR016067 S-adenosylmethionine decarboxylase, core Y89_0728 IPR009078 Ferritin-like superfamily Y89_0728 IPR011566 Ubiquinone biosynthesis protein Coq7 Y89_0728 IPR012347 Ferritin-related Y89_0729 IPR001310 Histidine triad (HIT) protein Y89_0729 IPR019808 Histidine triad, conserved site Y89_0729 IPR036265 Y89_0729 Y89_0730 IPR003593 AAA+ ATPase domain Y89_0730 IPR003959 ATPase, AAA-type, core Y89_0730 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0731 IPR002347 Glucose/ribitol dehydrogenase Y89_0731 IPR036291 Y89_0731 Y89_0732 IPR008523 Lactobacillus phage LBR48, DUF805 Y89_0733 IPR004136 2-nitropropane dioxygenase, NPD Y89_0733 IPR013785 Aldolase-type TIM barrel Y89_0734 IPR005265 Uncharacterised protein family UPF0093 Y89_0735 IPR000534 Semialdehyde dehydrogenase, NAD-binding Y89_0735 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 Y89_0735 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Y89_0735 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site Y89_0735 IPR036291 Y89_0735 Y89_0737 IPR007607 Protein of unknown function DUF583 Y89_0738 IPR000361 FeS cluster biogenesis Y89_0738 IPR016092 FeS cluster insertion protein Y89_0738 IPR017870 FeS cluster insertion, C-terminal, conserved site Y89_0738 IPR023063 Iron-sulfur cluster insertion protein ErpA Y89_0738 IPR035903 Y89_0738 Y89_0739 IPR005338 Anhydro-N-acetylmuramic acid kinase Y89_0740 IPR007340 Opacity-associated protein A Y89_0740 IPR011055 Duplicated hybrid motif Y89_0740 IPR016047 Peptidase M23 Y89_0741 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Y89_0741 IPR002305 Aminoacyl-tRNA synthetase, class Ic Y89_0741 IPR002307 Tyrosine-tRNA ligase Y89_0741 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_0741 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 Y89_0741 IPR036986 Y89_0741 Y89_0742 IPR004143 Biotin/lipoate A/B protein ligase Y89_0742 IPR004408 Biotin--acetyl-CoA-carboxylase ligase Y89_0742 IPR008988 Transcriptional repressor, C-terminal Y89_0742 IPR013196 Helix-turn-helix, type 11 Y89_0742 IPR030855 Y89_0742 Y89_0742 IPR036388 Y89_0742 Y89_0742 IPR036390 Y89_0742 Y89_0743 IPR004619 Type III pantothenate kinase Y89_0744 IPR007730 Sporulation-related domain Y89_0744 IPR036680 Y89_0744 Y89_0745 IPR000795 Elongation factor, GTP-binding domain Y89_0745 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Y89_0745 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Y89_0745 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle Y89_0745 IPR005225 Small GTP-binding protein domain Y89_0745 IPR009000 Translation protein, beta-barrel domain Y89_0745 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Y89_0745 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0745 IPR031157 Y89_0745 Y89_0747 IPR001062 Transcription antitermination protein, NusG Y89_0747 IPR005824 KOW Y89_0747 IPR006645 NusG, N-terminal Y89_0747 IPR008991 Translation protein SH3-like domain Y89_0747 IPR014722 Ribosomal protein L2 domain 2 Y89_0747 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Y89_0747 IPR036735 Y89_0747 Y89_0748 IPR000911 Ribosomal protein L11/L12 Y89_0748 IPR006519 Ribosomal protein L11, bacterial-type Y89_0748 IPR020783 Ribosomal protein L11, C-terminal Y89_0748 IPR020784 Ribosomal protein L11, N-terminal Y89_0748 IPR020785 Ribosomal protein L11, conserved site Y89_0748 IPR036769 Y89_0748 Y89_0748 IPR036796 Y89_0748 Y89_0749 IPR002143 Ribosomal protein L1 Y89_0749 IPR005878 Ribosomal protein L1, bacterial-type Y89_0749 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Y89_0749 IPR023673 Ribosomal protein L1, conserved site Y89_0749 IPR023674 Ribosomal protein L1-like Y89_0749 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Y89_0750 IPR001790 Ribosomal protein L10/acidic P0 Y89_0750 IPR002363 Ribosomal protein L10, eubacterial, conserved site Y89_0750 IPR022973 Ribosomal protein L10 Y89_0751 IPR000206 Ribosomal protein L7/L12 Y89_0751 IPR008932 Ribosomal protein L7/L12, oligomerisation Y89_0751 IPR013823 Ribosomal protein L7/L12, C-terminal Y89_0751 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Y89_0751 IPR036235 Y89_0751 Y89_0752 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 Y89_0752 IPR007121 RNA polymerase, beta subunit, conserved site Y89_0752 IPR007641 RNA polymerase Rpb2, domain 7 Y89_0752 IPR007642 RNA polymerase Rpb2, domain 2 Y89_0752 IPR007644 RNA polymerase, beta subunit, protrusion Y89_0752 IPR007645 RNA polymerase Rpb2, domain 3 Y89_0752 IPR010243 DNA-directed RNA polymerase, beta subunit Y89_0752 IPR014724 RNA polymerase Rpb2, OB-fold Y89_0752 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain Y89_0752 IPR037033 Y89_0752 Y89_0752 IPR037034 Y89_0752 Y89_0753 IPR000722 RNA polymerase, alpha subunit Y89_0753 IPR006592 RNA polymerase, N-terminal Y89_0753 IPR007066 RNA polymerase Rpb1, domain 3 Y89_0753 IPR007080 RNA polymerase Rpb1, domain 1 Y89_0753 IPR007081 RNA polymerase Rpb1, domain 5 Y89_0753 IPR007083 RNA polymerase Rpb1, domain 4 Y89_0753 IPR012754 DNA-directed RNA polymerase, subunit beta-prime Y89_0753 IPR038120 Y89_0753 Y89_0754 IPR005679 Ribosomal protein S12, bacteria Y89_0754 IPR006032 Ribosomal protein S12/S23 Y89_0754 IPR012340 Nucleic acid-binding, OB-fold Y89_0755 IPR000235 Ribosomal protein S5/S7 Y89_0755 IPR005717 Ribosomal protein S7, bacterial/organellar-type Y89_0755 IPR020606 Ribosomal protein S7, conserved site Y89_0755 IPR023798 Ribosomal protein S7 domain Y89_0755 IPR036823 Y89_0755 Y89_0756 IPR000640 Translation elongation factor EFG, V domain Y89_0756 IPR000795 Elongation factor, GTP-binding domain Y89_0756 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Y89_0756 IPR004540 Translation elongation factor EFG/EF2 Y89_0756 IPR005225 Small GTP-binding protein domain Y89_0756 IPR005517 Translation elongation factor EFG/EF2, domain IV Y89_0756 IPR009000 Translation protein, beta-barrel domain Y89_0756 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_0756 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_0756 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0756 IPR031157 Y89_0756 Y89_0756 IPR035647 Y89_0756 Y89_0757 IPR000795 Elongation factor, GTP-binding domain Y89_0757 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Y89_0757 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Y89_0757 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle Y89_0757 IPR005225 Small GTP-binding protein domain Y89_0757 IPR009000 Translation protein, beta-barrel domain Y89_0757 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Y89_0757 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0757 IPR031157 Y89_0757 Y89_0758 IPR001848 Ribosomal protein S10 Y89_0758 IPR018268 Ribosomal protein S10, conserved site Y89_0758 IPR027486 Ribosomal protein S10 domain Y89_0758 IPR036838 Y89_0758 Y89_0759 IPR000597 Ribosomal protein L3 Y89_0759 IPR009000 Translation protein, beta-barrel domain Y89_0759 IPR019926 Ribosomal protein L3, conserved site Y89_0759 IPR019927 Ribosomal protein L3, bacterial/organelle-type Y89_0760 IPR002136 Ribosomal protein L4/L1e Y89_0760 IPR013005 Ribosomal protein L4/L1e, bacterial-type Y89_0760 IPR023574 Ribosomal protein L4 domain Y89_0761 IPR012677 Nucleotide-binding, alpha-beta plait Y89_0761 IPR012678 Ribosomal protein L23/L15e core domain Y89_0761 IPR013025 Ribosomal protein L25/L23 Y89_0762 IPR002171 Ribosomal protein L2 Y89_0762 IPR005880 Ribosomal protein L2, bacterial/organellar-type Y89_0762 IPR008991 Translation protein SH3-like domain Y89_0762 IPR012340 Nucleic acid-binding, OB-fold Y89_0762 IPR014722 Ribosomal protein L2 domain 2 Y89_0762 IPR014726 Ribosomal protein L2, domain 3 Y89_0762 IPR022666 Ribosomal Proteins L2, RNA binding domain Y89_0762 IPR022669 Ribosomal protein L2, C-terminal Y89_0762 IPR022671 Ribosomal protein L2, conserved site Y89_0763 IPR002222 Ribosomal protein S19/S15 Y89_0763 IPR005732 Ribosomal protein S19, bacterial-type Y89_0763 IPR020934 Ribosomal protein S19 conserved site Y89_0763 IPR023575 Ribosomal protein S19, superfamily Y89_0764 IPR001063 Ribosomal protein L22/L17 Y89_0764 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type Y89_0764 IPR018260 Ribosomal protein L22/L17, conserved site Y89_0764 IPR036394 Y89_0764 Y89_0765 IPR001351 Ribosomal protein S3, C-terminal Y89_0765 IPR004044 K Homology domain, type 2 Y89_0765 IPR004087 K Homology domain Y89_0765 IPR005704 Ribosomal protein S3, bacterial Y89_0765 IPR009019 K homology domain, prokaryotic type Y89_0765 IPR015946 K homology domain-like, alpha/beta Y89_0765 IPR018280 Ribosomal protein S3, conserved site Y89_0765 IPR036419 Y89_0765 Y89_0766 IPR000114 Ribosomal protein L16 Y89_0766 IPR016180 Ribosomal protein L10e/L16 Y89_0766 IPR020798 Ribosomal protein L16, conserved site Y89_0766 IPR036920 Y89_0766 Y89_0767 IPR001854 Ribosomal protein L29 Y89_0767 IPR018254 Ribosomal protein L29, conserved site Y89_0767 IPR036049 Y89_0767 Y89_0768 IPR000266 Ribosomal protein S17 Y89_0768 IPR012340 Nucleic acid-binding, OB-fold Y89_0768 IPR019984 Ribosomal protein S17, bacterial-type Y89_0769 IPR000218 Ribosomal protein L14b/L23e Y89_0769 IPR005745 Ribosomal protein L14, bacterial-type Y89_0769 IPR019972 Ribosomal protein L14 conserved site Y89_0769 IPR036853 Y89_0769 Y89_0770 IPR003256 Ribosomal protein L24 Y89_0770 IPR005824 KOW Y89_0770 IPR005825 Ribosomal protein L24/L26, conserved site Y89_0770 IPR008991 Translation protein SH3-like domain Y89_0770 IPR014722 Ribosomal protein L2 domain 2 Y89_0771 IPR002132 Ribosomal protein L5 Y89_0771 IPR020929 Ribosomal protein L5, conserved site Y89_0771 IPR020930 Ribosomal protein L5, bacterial-type Y89_0771 IPR022803 Ribosomal protein L5 domain Y89_0771 IPR031309 Y89_0771 Y89_0771 IPR031310 Y89_0771 Y89_0772 IPR001209 Ribosomal protein S14 Y89_0772 IPR018271 Ribosomal protein S14, conserved site Y89_0772 IPR023036 Ribosomal protein S14, bacterial/plastid Y89_0773 IPR000630 Ribosomal protein S8 Y89_0773 IPR035987 Y89_0773 Y89_0774 IPR000702 Ribosomal protein L6 Y89_0774 IPR002358 Ribosomal protein L6, conserved site Y89_0774 IPR019906 Ribosomal protein L6, bacterial-type Y89_0774 IPR020040 Ribosomal protein L6, alpha-beta domain Y89_0774 IPR036789 Y89_0774 Y89_0775 IPR004389 Ribosomal protein L18, bacterial-type Y89_0775 IPR005484 Ribosomal protein L18/L5 Y89_0776 IPR005324 Ribosomal protein S5, C-terminal Y89_0776 IPR005712 Ribosomal protein S5, bacterial-type Y89_0776 IPR013810 Ribosomal protein S5, N-terminal Y89_0776 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_0776 IPR018192 Ribosomal protein S5, N-terminal, conserved site Y89_0776 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_0777 IPR005996 Ribosomal protein L30, bacterial-type Y89_0777 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Y89_0777 IPR036919 Y89_0777 Y89_0778 IPR001196 Ribosomal protein L15, conserved site Y89_0778 IPR005749 Ribosomal protein L15, bacterial-type Y89_0778 IPR021131 Ribosomal protein L18e/L15P Y89_0778 IPR030878 Y89_0778 Y89_0778 IPR036227 Y89_0778 Y89_0779 IPR002208 SecY/SEC61-alpha family Y89_0779 IPR023201 SecY subunit domain Y89_0779 IPR026593 Protein translocase subunit SecY Y89_0779 IPR030659 Y89_0779 Y89_0780 IPR000473 Ribosomal protein L36 Y89_0780 IPR035977 Y89_0780 Y89_0781 IPR001892 Ribosomal protein S13 Y89_0781 IPR010979 Ribosomal protein S13-like, H2TH Y89_0781 IPR018269 Ribosomal protein S13, conserved site Y89_0781 IPR019980 Ribosomal protein S13, bacterial-type Y89_0781 IPR027437 30s ribosomal protein S13, C-terminal Y89_0782 IPR001971 Ribosomal protein S11 Y89_0782 IPR018102 Ribosomal S11, conserved site Y89_0782 IPR019981 Ribosomal protein S11, bacterial-type Y89_0782 IPR036967 Y89_0782 Y89_0783 IPR001912 Ribosomal protein S4/S9, N-terminal Y89_0783 IPR002942 RNA-binding S4 domain Y89_0783 IPR005709 Ribosomal protein S4, bacterial-type Y89_0783 IPR018079 Ribosomal protein S4, conserved site Y89_0783 IPR036986 Y89_0783 Y89_0784 IPR011260 RNA polymerase, alpha subunit, C-terminal Y89_0784 IPR011262 DNA-directed RNA polymerase, insert domain Y89_0784 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type Y89_0784 IPR011773 DNA-directed RNA polymerase, alpha subunit Y89_0784 IPR036603 Y89_0784 Y89_0784 IPR036643 Y89_0784 Y89_0785 IPR000456 Ribosomal protein L17 Y89_0785 IPR036373 Y89_0785 Y89_0786 IPR002226 Catalase haem-binding site Y89_0786 IPR010582 Catalase immune-responsive domain Y89_0786 IPR011614 Catalase core domain Y89_0786 IPR018028 Catalase, mono-functional, haem-containing Y89_0786 IPR020835 Catalase-like domain Y89_0786 IPR024708 Catalase active site Y89_0786 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 Y89_0786 IPR037060 Y89_0786 Y89_0787 IPR002024 Bacterioferritin Y89_0787 IPR008331 Ferritin/DPS protein domain Y89_0787 IPR009078 Ferritin-like superfamily Y89_0787 IPR012347 Ferritin-related Y89_0788 IPR004602 UvrABC system subunit A Y89_0788 IPR017871 ABC transporter, conserved site Y89_0788 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0789 IPR011701 Major facilitator superfamily Y89_0789 IPR036259 Y89_0789 Y89_0790 IPR000424 Primosome PriB/single-strand DNA-binding Y89_0790 IPR011344 Single-stranded DNA-binding protein Y89_0790 IPR012340 Nucleic acid-binding, OB-fold Y89_0791 IPR004561 Isochorismate synthase Y89_0791 IPR005801 ADC synthase Y89_0791 IPR015890 Chorismate binding, C-terminal Y89_0792 IPR002701 Chorismate mutase Y89_0792 IPR008241 Isochorismate pyruvate-lyase, salicylic acid biosynthesis Y89_0792 IPR036263 Y89_0792 Y89_0792 IPR036979 Y89_0792 Y89_0793 IPR001031 Thioesterase Y89_0793 IPR020802 Polyketide synthase, thioesterase domain Y89_0793 IPR029058 Alpha/Beta hydrolase fold Y89_0794 IPR000873 AMP-dependent synthetase/ligase Y89_0794 IPR020845 AMP-binding, conserved site Y89_0794 IPR025110 AMP-binding enzyme C-terminal domain Y89_0795 IPR009057 Homeodomain-like Y89_0795 IPR018060 DNA binding HTH domain, AraC-type Y89_0795 IPR018062 HTH domain AraC-type, conserved site Y89_0796 IPR000873 AMP-dependent synthetase/ligase Y89_0796 IPR001242 Condensation domain Y89_0796 IPR006162 Phosphopantetheine attachment site Y89_0796 IPR009081 Acyl carrier protein-like Y89_0796 IPR010071 Amino acid adenylation domain Y89_0796 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Y89_0796 IPR020845 AMP-binding, conserved site Y89_0796 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_0796 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0796 IPR036736 Y89_0796 Y89_0797 IPR000873 AMP-dependent synthetase/ligase Y89_0797 IPR001242 Condensation domain Y89_0797 IPR006162 Phosphopantetheine attachment site Y89_0797 IPR009081 Acyl carrier protein-like Y89_0797 IPR010071 Amino acid adenylation domain Y89_0797 IPR013217 Methyltransferase type 12 Y89_0797 IPR020459 AMP-binding Y89_0797 IPR020845 AMP-binding, conserved site Y89_0797 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_0797 IPR029058 Alpha/Beta hydrolase fold Y89_0797 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0797 IPR036736 Y89_0797 Y89_0798 IPR000683 Oxidoreductase, N-terminal Y89_0798 IPR010091 Thiazolinyl imide reductase Y89_0798 IPR036291 Y89_0798 Y89_0799 IPR003439 ABC transporter-like Y89_0799 IPR003593 AAA+ ATPase domain Y89_0799 IPR011527 ABC transporter type 1, transmembrane domain Y89_0799 IPR017871 ABC transporter, conserved site Y89_0799 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0799 IPR036640 Y89_0799 Y89_0800 IPR003439 ABC transporter-like Y89_0800 IPR003593 AAA+ ATPase domain Y89_0800 IPR017871 ABC transporter, conserved site Y89_0800 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0800 IPR036640 Y89_0800 Y89_0801 IPR000531 TonB-dependent receptor, beta-barrel Y89_0801 IPR010105 TonB-dependent siderophore receptor Y89_0801 IPR010917 TonB-dependent receptor, conserved site Y89_0801 IPR012910 TonB-dependent receptor, plug Y89_0801 IPR036942 Y89_0801 Y89_0801 IPR037066 Y89_0801 Y89_0803 IPR005625 PepSY-associated TM helix Y89_0804 IPR014090 Siderophore transporter, RhtX/FptX family Y89_0804 IPR024371 Acetyl-coenzyme A transporter 1 Y89_0804 IPR036259 Y89_0804 Y89_0805 IPR002938 Monooxygenase, FAD-binding Y89_0805 IPR036188 Y89_0805 Y89_0806 IPR000659 Pyridoxamine 5'-phosphate oxidase Y89_0806 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain Y89_0806 IPR012349 FMN-binding split barrel Y89_0806 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal Y89_0806 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site Y89_0807 IPR003719 Phenazine biosynthesis PhzF protein Y89_0808 IPR005801 ADC synthase Y89_0808 IPR015890 Chorismate binding, C-terminal Y89_0808 IPR017926 Glutamine amidotransferase Y89_0808 IPR029062 Class I glutamine amidotransferase-like Y89_0809 IPR000868 Isochorismatase-like Y89_0809 IPR016291 Isochorismatase Y89_0809 IPR036380 Y89_0809 Y89_0810 IPR002480 DAHP synthetase, class II Y89_0810 IPR013785 Aldolase-type TIM barrel Y89_0811 IPR004964 Phenazine biosynthesis protein A/B Y89_0811 IPR032710 Y89_0811 Y89_0812 IPR004964 Phenazine biosynthesis protein A/B Y89_0812 IPR032710 Y89_0812 Y89_0813 IPR001077 O-methyltransferase, family 2 Y89_0813 IPR016461 Caffeate O-methyltransferase (COMT) family Y89_0813 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0813 IPR031725 Y89_0813 Y89_0813 IPR036388 Y89_0813 Y89_0813 IPR036390 Y89_0813 Y89_0814 IPR003423 Outer membrane efflux protein Y89_0814 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_0815 IPR001036 Acriflavin resistance protein Y89_0815 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_0816 IPR006143 RND efflux pump, membrane fusion protein Y89_0816 IPR032317 Y89_0816 Y89_0817 IPR032808 Y89_0817 Y89_0818 IPR011045 Nitrous oxide reductase, N-terminal Y89_0818 IPR015943 WD40/YVTN repeat-like-containing domain Y89_0818 IPR019405 Lactonase, 7-bladed beta propeller Y89_0819 IPR000847 Transcription regulator HTH, LysR Y89_0819 IPR005119 LysR, substrate-binding Y89_0819 IPR036388 Y89_0819 Y89_0819 IPR036390 Y89_0819 Y89_0820 IPR004136 2-nitropropane dioxygenase, NPD Y89_0820 IPR013785 Aldolase-type TIM barrel Y89_0821 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site Y89_0821 IPR005905 D-alanine--D-alanine ligase Y89_0821 IPR011095 D-alanine--D-alanine ligase, C-terminal Y89_0821 IPR011127 D-alanine--D-alanine ligase, N-terminal domain Y89_0821 IPR013815 ATP-grasp fold, subdomain 1 Y89_0821 IPR016185 Pre-ATP-grasp domain Y89_0822 IPR001279 Beta-lactamase-like Y89_0822 IPR036866 Y89_0822 Y89_0823 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_0823 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_0823 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_0823 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_0823 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Y89_0823 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Y89_0823 IPR036250 Y89_0823 Y89_0823 IPR037069 Y89_0823 Y89_0824 IPR000873 AMP-dependent synthetase/ligase Y89_0824 IPR025110 AMP-binding enzyme C-terminal domain Y89_0825 IPR000014 PAS domain Y89_0825 IPR001610 PAC motif Y89_0825 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_0825 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_0825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_0825 IPR013655 PAS fold-3 Y89_0825 IPR035965 Y89_0825 Y89_0825 IPR036097 Y89_0825 Y89_0825 IPR036890 Y89_0825 Y89_0826 IPR000792 Transcription regulator LuxR, C-terminal Y89_0826 IPR001789 Signal transduction response regulator, receiver domain Y89_0826 IPR011006 CheY-like superfamily Y89_0826 IPR016032 Signal transduction response regulator, C-terminal effector Y89_0826 IPR036388 Y89_0826 Y89_0827 IPR001638 Extracellular solute-binding protein, family 3 Y89_0827 IPR018313 Extracellular solute-binding protein, family 3, conserved site Y89_0828 IPR000515 MetI-like domain Y89_0828 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_0828 IPR035906 Y89_0828 Y89_0829 IPR000515 MetI-like domain Y89_0829 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_0829 IPR035906 Y89_0829 Y89_0830 IPR003439 ABC transporter-like Y89_0830 IPR003593 AAA+ ATPase domain Y89_0830 IPR017871 ABC transporter, conserved site Y89_0830 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0830 IPR030679 Y89_0830 Y89_0831 IPR005123 Oxoglutarate/iron-dependent dioxygenase Y89_0831 IPR026992 Non-haem dioxygenase N-terminal domain Y89_0831 IPR027443 Isopenicillin N synthase-like Y89_0832 IPR002938 Monooxygenase, FAD-binding Y89_0832 IPR036188 Y89_0832 Y89_0833 IPR015590 Aldehyde dehydrogenase domain Y89_0833 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_0833 IPR016161 Aldehyde/histidinol dehydrogenase Y89_0833 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_0833 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_0833 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_0834 IPR002220 DapA-like Y89_0834 IPR013785 Aldolase-type TIM barrel Y89_0835 IPR005828 General substrate transporter Y89_0835 IPR005829 Sugar transporter, conserved site Y89_0835 IPR036259 Y89_0835 Y89_0836 IPR006076 FAD dependent oxidoreductase Y89_0836 IPR036188 Y89_0836 Y89_0837 IPR000524 Transcription regulator HTH, GntR Y89_0837 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_0837 IPR011711 GntR, C-terminal Y89_0837 IPR036388 Y89_0837 Y89_0837 IPR036390 Y89_0837 Y89_0838 IPR002818 ThiJ/PfpI Y89_0838 IPR009057 Homeodomain-like Y89_0838 IPR018060 DNA binding HTH domain, AraC-type Y89_0838 IPR029062 Class I glutamine amidotransferase-like Y89_0839 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_0840 IPR007396 Transcriptional regulator PAI 2-type Y89_0840 IPR012349 FMN-binding split barrel Y89_0841 IPR005146 B3/B4 tRNA-binding domain Y89_0842 IPR000399 TPP-binding enzyme, conserved site Y89_0842 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Y89_0842 IPR012000 Thiamine pyrophosphate enzyme, central domain Y89_0842 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Y89_0842 IPR029035 DHS-like NAD/FAD-binding domain Y89_0842 IPR029061 Thiamin diphosphate-binding fold Y89_0843 IPR005318 Outer membrane porin, bacterial Y89_0843 IPR023614 Porin domain Y89_0844 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0845 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V Y89_0845 IPR011057 Mss4-like Y89_0846 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Y89_0847 IPR009003 Trypsin-like cysteine/serine peptidase domain Y89_0848 IPR000847 Transcription regulator HTH, LysR Y89_0848 IPR005119 LysR, substrate-binding Y89_0848 IPR036388 Y89_0848 Y89_0848 IPR036390 Y89_0848 Y89_0849 IPR006175 YjgF/Yer057p/UK114 family Y89_0849 IPR035959 Y89_0849 Y89_0850 IPR004808 AP endonuclease 1 Y89_0850 IPR005135 Endonuclease/exonuclease/phosphatase Y89_0850 IPR020847 AP endonuclease 1, binding site Y89_0850 IPR036691 Y89_0850 Y89_0851 IPR002818 ThiJ/PfpI Y89_0851 IPR006286 Peptidase C56, PfpI Y89_0851 IPR029062 Class I glutamine amidotransferase-like Y89_0852 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II Y89_0852 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_0852 IPR036188 Y89_0852 Y89_0853 IPR000944 Transcription regulator Rrf2-like Y89_0853 IPR036388 Y89_0853 Y89_0853 IPR036390 Y89_0853 Y89_0854 IPR000531 TonB-dependent receptor, beta-barrel Y89_0854 IPR010105 TonB-dependent siderophore receptor Y89_0854 IPR011662 Secretin/TonB, short N-terminal Y89_0854 IPR012910 TonB-dependent receptor, plug Y89_0854 IPR036942 Y89_0854 Y89_0854 IPR037066 Y89_0854 Y89_0855 IPR018170 Aldo/keto reductase, conserved site Y89_0855 IPR020471 Aldo/keto reductase subgroup Y89_0855 IPR023210 NADP-dependent oxidoreductase domain Y89_0855 IPR036812 Y89_0855 Y89_0856 IPR000182 GNAT domain Y89_0856 IPR016181 Acyl-CoA N-acyltransferase Y89_0857 IPR000524 Transcription regulator HTH, GntR Y89_0857 IPR004839 Aminotransferase, class I/classII Y89_0857 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0857 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0857 IPR036388 Y89_0857 Y89_0857 IPR036390 Y89_0857 Y89_0858 IPR009288 AIG2-like Y89_0858 IPR036568 Y89_0858 Y89_0859 IPR023631 Amidase signature domain Y89_0859 IPR036928 Y89_0859 Y89_0860 IPR002347 Glucose/ribitol dehydrogenase Y89_0860 IPR036291 Y89_0860 Y89_0861 IPR000522 ABC transporter, permease protein Y89_0861 IPR037294 Y89_0861 Y89_0862 IPR000522 ABC transporter, permease protein Y89_0862 IPR037294 Y89_0862 Y89_0863 IPR002491 ABC transporter periplasmic binding domain Y89_0864 IPR003439 ABC transporter-like Y89_0864 IPR003593 AAA+ ATPase domain Y89_0864 IPR017871 ABC transporter, conserved site Y89_0864 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0865 IPR005471 Transcription regulator IclR, N-terminal Y89_0865 IPR014757 Transcription regulator IclR, C-terminal Y89_0865 IPR029016 GAF domain-like Y89_0865 IPR036388 Y89_0865 Y89_0865 IPR036390 Y89_0865 Y89_0866 IPR000531 TonB-dependent receptor, beta-barrel Y89_0866 IPR012910 TonB-dependent receptor, plug Y89_0866 IPR036942 Y89_0866 Y89_0867 IPR011251 Luciferase-like domain Y89_0867 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A Y89_0867 IPR036661 Y89_0867 Y89_0868 IPR003646 SH3-like domain, bacterial-type Y89_0868 IPR016476 SH3 domain protein Y89_0869 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Y89_0869 IPR011032 GroES (chaperonin 10)-like Y89_0869 IPR013149 Alcohol dehydrogenase, C-terminal Y89_0869 IPR013154 Alcohol dehydrogenase GroES-like Y89_0869 IPR020843 Polyketide synthase, enoylreductase Y89_0869 IPR027399 Alcohol dehydrogenase GroES-associated N-terminal domain Y89_0869 IPR036291 Y89_0869 Y89_0870 IPR000073 Alpha/beta hydrolase fold-1 Y89_0870 IPR000089 Biotin/lipoyl attachment Y89_0870 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Y89_0870 IPR011053 Single hybrid motif Y89_0870 IPR029058 Alpha/Beta hydrolase fold Y89_0871 IPR005475 Transketolase-like, pyrimidine-binding domain Y89_0871 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Y89_0871 IPR029061 Thiamin diphosphate-binding fold Y89_0871 IPR033248 Y89_0871 Y89_0873 IPR002504 Inorganic polyphosphate/ATP-NAD kinase Y89_0873 IPR011391 Acetoin catabolism kinase AcoX Y89_0873 IPR016064 ATP-NAD kinase-like domain Y89_0873 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 Y89_0874 IPR002347 Glucose/ribitol dehydrogenase Y89_0874 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_0874 IPR036291 Y89_0874 Y89_0875 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_0875 IPR002197 DNA binding HTH domain, Fis-type Y89_0875 IPR003018 GAF domain Y89_0875 IPR003593 AAA+ ATPase domain Y89_0875 IPR009057 Homeodomain-like Y89_0875 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_0875 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_0875 IPR025944 Sigma-54 interaction domain, conserved site Y89_0875 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0875 IPR029016 GAF domain-like Y89_0876 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_0877 IPR000847 Transcription regulator HTH, LysR Y89_0877 IPR005119 LysR, substrate-binding Y89_0877 IPR036388 Y89_0877 Y89_0877 IPR036390 Y89_0877 Y89_0878 IPR003423 Outer membrane efflux protein Y89_0878 IPR028351 Cyclolysin transport protein CyaE Y89_0879 IPR003439 ABC transporter-like Y89_0879 IPR003593 AAA+ ATPase domain Y89_0879 IPR005074 Peptidase C39, bacteriocin processing Y89_0879 IPR011527 ABC transporter type 1, transmembrane domain Y89_0879 IPR017871 ABC transporter, conserved site Y89_0879 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0879 IPR036640 Y89_0879 Y89_0880 IPR003997 RTX secretion protein D, Gram-negative bacteria Y89_0882 IPR006094 FAD linked oxidase, N-terminal Y89_0882 IPR015213 Cholesterol oxidase, substrate-binding Y89_0882 IPR016164 FAD-linked oxidase-like, C-terminal Y89_0882 IPR016167 FAD-binding, type 2, subdomain 1 Y89_0882 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_0882 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain Y89_0882 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Y89_0882 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Y89_0882 IPR036318 Y89_0882 Y89_0884 IPR002305 Aminoacyl-tRNA synthetase, class Ic Y89_0884 IPR002307 Tyrosine-tRNA ligase Y89_0884 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_0884 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 Y89_0884 IPR036986 Y89_0884 Y89_0885 IPR005318 Outer membrane porin, bacterial Y89_0885 IPR023614 Porin domain Y89_0886 IPR004812 Drug resistance transporter Bcr/CmlA subfamily Y89_0886 IPR011701 Major facilitator superfamily Y89_0886 IPR036259 Y89_0886 Y89_0887 IPR000835 MarR-type HTH domain Y89_0887 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR Y89_0887 IPR036388 Y89_0887 Y89_0887 IPR036390 Y89_0887 Y89_0889 IPR000883 Cytochrome c oxidase subunit I Y89_0889 IPR004677 Cytochrome c oxidase cbb3-type, subunit I Y89_0889 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Y89_0889 IPR036927 Y89_0889 Y89_0890 IPR000524 Transcription regulator HTH, GntR Y89_0890 IPR004839 Aminotransferase, class I/classII Y89_0890 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0890 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_0890 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0890 IPR036388 Y89_0890 Y89_0890 IPR036390 Y89_0890 Y89_0891 IPR013783 Immunoglobulin-like fold Y89_0891 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG Y89_0891 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_0891 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_0891 IPR032879 Y89_0891 Y89_0892 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Y89_0892 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site Y89_0892 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Y89_0892 IPR036136 Y89_0892 Y89_0893 IPR008318 Uncharacterised conserved protein UCP030820 Y89_0894 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Y89_0894 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Y89_0894 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_0895 IPR011234 Fumarylacetoacetase, C-terminal-related Y89_0895 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase Y89_0895 IPR036663 Y89_0895 Y89_0896 IPR011701 Major facilitator superfamily Y89_0896 IPR036259 Y89_0896 Y89_0897 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase Y89_0897 IPR014347 Tautomerase/MIF superfamily Y89_0898 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B Y89_0898 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe Y89_0899 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase Y89_0899 IPR015590 Aldehyde dehydrogenase domain Y89_0899 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_0899 IPR016161 Aldehyde/histidinol dehydrogenase Y89_0899 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_0899 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_0899 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_0900 IPR011234 Fumarylacetoacetase, C-terminal-related Y89_0900 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit Y89_0900 IPR036663 Y89_0900 Y89_0901 IPR011234 Fumarylacetoacetase, C-terminal-related Y89_0901 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit Y89_0901 IPR036663 Y89_0901 Y89_0902 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_0902 IPR009057 Homeodomain-like Y89_0902 IPR011051 RmlC-like cupin domain Y89_0902 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA Y89_0902 IPR014710 RmlC-like jelly roll fold Y89_0902 IPR018060 DNA binding HTH domain, AraC-type Y89_0902 IPR020449 Transcription regulator HTH, AraC- type Y89_0903 IPR002575 Aminoglycoside phosphotransferase Y89_0903 IPR011009 Protein kinase-like domain Y89_0903 IPR024165 Aminoglycoside 3-phosphotransferase Y89_0904 IPR029045 ClpP/crotonase-like domain Y89_0905 IPR001294 Phytochrome Y89_0905 IPR003018 GAF domain Y89_0905 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_0905 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_0905 IPR013515 Phytochrome, central region Y89_0905 IPR013654 PAS fold-2 Y89_0905 IPR029016 GAF domain-like Y89_0905 IPR035965 Y89_0905 Y89_0905 IPR036097 Y89_0905 Y89_0905 IPR036890 Y89_0905 Y89_0906 IPR016053 Haem oxygenase-like Y89_0906 IPR016084 Haem oxygenase-like, multi-helical Y89_0907 IPR021826 Protein of unknown function DUF3412 Y89_0907 IPR027820 Domain of unknown function DUF4478 Y89_0907 IPR031100 Y89_0907 Y89_0907 IPR037153 Y89_0907 Y89_0908 IPR000182 GNAT domain Y89_0908 IPR016181 Acyl-CoA N-acyltransferase Y89_0909 IPR011701 Major facilitator superfamily Y89_0909 IPR023495 Sugar efflux transporter, putative Y89_0909 IPR036259 Y89_0909 Y89_0910 IPR000014 PAS domain Y89_0910 IPR001610 PAC motif Y89_0910 IPR001789 Signal transduction response regulator, receiver domain Y89_0910 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_0910 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_0910 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_0910 IPR006189 CHASE Y89_0910 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_0910 IPR011006 CheY-like superfamily Y89_0910 IPR013655 PAS fold-3 Y89_0910 IPR013767 PAS fold Y89_0910 IPR035965 Y89_0910 Y89_0910 IPR036097 Y89_0910 Y89_0910 IPR036641 Y89_0910 Y89_0910 IPR036890 Y89_0910 Y89_0912 IPR001466 Beta-lactamase-related Y89_0912 IPR001586 Beta-lactamase, class-C active site Y89_0912 IPR012338 Beta-lactamase/transpeptidase-like Y89_0913 IPR000847 Transcription regulator HTH, LysR Y89_0913 IPR005119 LysR, substrate-binding Y89_0913 IPR036388 Y89_0913 Y89_0913 IPR036390 Y89_0913 Y89_0915 IPR003607 HD/PDEase domain Y89_0915 IPR006674 HD domain Y89_0915 IPR006675 Uncharacterised domain HDIG Y89_0915 IPR021812 Protein of unknown function DUF3391 Y89_0916 IPR002048 EF-hand domain Y89_0916 IPR011992 EF-hand domain pair Y89_0916 IPR018247 EF-Hand 1, calcium-binding site Y89_0917 IPR007801 Uncharacterised protein family UPF0276 Y89_0917 IPR036237 Y89_0917 Y89_0918 IPR018640 Protein of unknown function DUF2063 Y89_0919 IPR032808 Y89_0919 Y89_0920 IPR013130 Ferric reductase transmembrane component-like domain Y89_0921 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_0921 IPR003660 HAMP linker domain Y89_0921 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_0921 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_0921 IPR036097 Y89_0921 Y89_0921 IPR036890 Y89_0921 Y89_0922 IPR001789 Signal transduction response regulator, receiver domain Y89_0922 IPR001867 Signal transduction response regulator, C-terminal Y89_0922 IPR011006 CheY-like superfamily Y89_0922 IPR016032 Signal transduction response regulator, C-terminal effector Y89_0922 IPR036388 Y89_0922 Y89_0923 IPR021245 Protein of unknown function DUF2790 Y89_0924 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Y89_0924 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Y89_0924 IPR012132 Glucose-methanol-choline oxidoreductase Y89_0924 IPR027424 Glucose Oxidase, domain 2 Y89_0924 IPR036188 Y89_0924 Y89_0925 IPR007049 Carbohydrate-selective porin OprB Y89_0925 IPR038673 Y89_0925 Y89_0926 IPR002347 Glucose/ribitol dehydrogenase Y89_0926 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_0926 IPR036291 Y89_0926 Y89_0927 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Y89_0927 IPR011032 GroES (chaperonin 10)-like Y89_0927 IPR013149 Alcohol dehydrogenase, C-terminal Y89_0927 IPR013154 Alcohol dehydrogenase GroES-like Y89_0927 IPR020843 Polyketide synthase, enoylreductase Y89_0927 IPR036291 Y89_0927 Y89_0928 IPR011701 Major facilitator superfamily Y89_0928 IPR036259 Y89_0928 Y89_0929 IPR011051 RmlC-like cupin domain Y89_0929 IPR013096 Cupin 2, conserved barrel Y89_0929 IPR014710 RmlC-like jelly roll fold Y89_0930 IPR009057 Homeodomain-like Y89_0930 IPR018060 DNA binding HTH domain, AraC-type Y89_0930 IPR018062 HTH domain AraC-type, conserved site Y89_0930 IPR020449 Transcription regulator HTH, AraC- type Y89_0930 IPR035418 Y89_0930 Y89_0931 IPR006683 Thioesterase superfamily Y89_0931 IPR029069 HotDog domain Y89_0932 IPR002563 Flavin reductase-like, FMN-binding Y89_0932 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component Y89_0932 IPR012349 FMN-binding split barrel Y89_0933 IPR004925 HpaB/PvcC/4-BUDH Y89_0933 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_0933 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria Y89_0933 IPR024674 HpaB/PvcC/4-BUDH N-terminal Y89_0933 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein Y89_0933 IPR024719 HpaB/PvcC/4-BUDH C-terminal Y89_0933 IPR036250 Y89_0933 Y89_0934 IPR014543 Uncharacterised conserved protein UCP028291 Y89_0935 IPR002347 Glucose/ribitol dehydrogenase Y89_0935 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_0935 IPR036291 Y89_0935 Y89_0936 IPR005814 Aminotransferase class-III Y89_0936 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_0936 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_0936 IPR015424 Pyridoxal phosphate-dependent transferase Y89_0937 IPR024724 Molybdenum cofactor biosynthesis protein F Y89_0937 IPR035348 Y89_0937 Y89_0938 IPR008966 Adhesion domain Y89_0938 IPR036937 Y89_0938 Y89_0939 IPR001829 Pili assembly chaperone, bacterial Y89_0939 IPR008962 PapD-like Y89_0939 IPR013783 Immunoglobulin-like fold Y89_0939 IPR016147 PapD, N-terminal, bacterial Y89_0939 IPR016148 Pili assembly chaperone, C-terminal domain Y89_0939 IPR018046 Pili assembly chaperone, conserved site Y89_0939 IPR036316 Y89_0939 Y89_0940 IPR000015 Outer membrane usher protein Y89_0940 IPR025885 PapC, N-terminal domain Y89_0940 IPR025949 PapC-like, C-terminal domain Y89_0940 IPR037224 Y89_0940 Y89_0941 IPR001829 Pili assembly chaperone, bacterial Y89_0941 IPR008962 PapD-like Y89_0941 IPR013783 Immunoglobulin-like fold Y89_0941 IPR016147 PapD, N-terminal, bacterial Y89_0941 IPR016148 Pili assembly chaperone, C-terminal domain Y89_0941 IPR036316 Y89_0941 Y89_0942 IPR008638 Filamentous haemagglutinin, N-terminal Y89_0942 IPR011050 Pectin lyase fold/virulence factor Y89_0942 IPR011493 GLUG Y89_0942 IPR012334 Pectin lyase fold Y89_0942 IPR024973 ESPR domain Y89_0943 IPR000259 Fimbrial-type adhesion domain Y89_0943 IPR008966 Adhesion domain Y89_0943 IPR036937 Y89_0943 Y89_0944 IPR000792 Transcription regulator LuxR, C-terminal Y89_0944 IPR001789 Signal transduction response regulator, receiver domain Y89_0944 IPR011006 CheY-like superfamily Y89_0944 IPR016032 Signal transduction response regulator, C-terminal effector Y89_0944 IPR036388 Y89_0944 Y89_0945 IPR002347 Glucose/ribitol dehydrogenase Y89_0945 IPR036291 Y89_0945 Y89_0946 IPR000873 AMP-dependent synthetase/ligase Y89_0946 IPR006162 Phosphopantetheine attachment site Y89_0946 IPR009081 Acyl carrier protein-like Y89_0946 IPR010071 Amino acid adenylation domain Y89_0946 IPR010080 Thioester reductase-like domain Y89_0946 IPR013120 Male sterility, NAD-binding Y89_0946 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Y89_0946 IPR020845 AMP-binding, conserved site Y89_0946 IPR025110 AMP-binding enzyme C-terminal domain Y89_0946 IPR036291 Y89_0946 Y89_0946 IPR036736 Y89_0946 Y89_0947 IPR001387 Cro/C1-type helix-turn-helix domain Y89_0947 IPR010982 Lambda repressor-like, DNA-binding domain Y89_0949 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0950 IPR000792 Transcription regulator LuxR, C-terminal Y89_0950 IPR016032 Signal transduction response regulator, C-terminal effector Y89_0950 IPR036388 Y89_0950 Y89_0951 IPR015590 Aldehyde dehydrogenase domain Y89_0951 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_0951 IPR016161 Aldehyde/histidinol dehydrogenase Y89_0951 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_0951 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_0951 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_0952 IPR002293 Amino acid/polyamine transporter I Y89_0953 IPR021500 Protein of unknown function DUF3156 Y89_0954 IPR009057 Homeodomain-like Y89_0954 IPR018060 DNA binding HTH domain, AraC-type Y89_0954 IPR018062 HTH domain AraC-type, conserved site Y89_0954 IPR020449 Transcription regulator HTH, AraC- type Y89_0954 IPR035418 Y89_0954 Y89_0955 IPR029903 Y89_0955 Y89_0955 IPR036291 Y89_0955 Y89_0956 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Y89_0956 IPR036291 Y89_0956 Y89_0957 IPR007360 Invasion gene expression up-regulator, SirB Y89_0958 IPR000758 Virulence-related outer membrane protein Y89_0958 IPR005618 Outer membrane protein, OmpW Y89_0958 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel Y89_0959 IPR021727 Protein of unknown function DUF3299 Y89_0960 IPR003838 Permease FtsX-like Y89_0960 IPR025857 MacB-like periplasmic core domain Y89_0961 IPR003439 ABC transporter-like Y89_0961 IPR003593 AAA+ ATPase domain Y89_0961 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0962 IPR021253 Protein of unknown function DUF2796 Y89_0964 IPR005746 Thioredoxin Y89_0964 IPR011990 Tetratricopeptide-like helical domain Y89_0964 IPR013766 Thioredoxin domain Y89_0964 IPR017937 Thioredoxin, conserved site Y89_0964 IPR036249 Y89_0964 Y89_0965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_0966 IPR039366 Y89_0966 Y89_0967 IPR003796 Ribonucleotide reductase regulator NrdR-like Y89_0967 IPR005144 ATP-cone Y89_0968 IPR002125 CMP/dCMP deaminase, zinc-binding Y89_0968 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal Y89_0968 IPR004794 Riboflavin biosynthesis protein RibD Y89_0968 IPR011549 Riboflavin-specific deaminase, C-terminal Y89_0968 IPR016192 APOBEC/CMP deaminase, zinc-binding Y89_0968 IPR016193 Cytidine deaminase-like Y89_0968 IPR024072 Dihydrofolate reductase-like domain Y89_0969 IPR001783 Lumazine-binding protein Y89_0969 IPR017938 Riboflavin synthase-like beta-barrel Y89_0969 IPR023366 ATP synthase subunit alpha-like domain Y89_0969 IPR026017 Lumazine-binding domain Y89_0970 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB Y89_0970 IPR017945 DHBP synthase RibB-like alpha/beta domain Y89_0970 IPR032677 Y89_0970 Y89_0970 IPR036144 Y89_0970 Y89_0971 IPR002180 6,7-dimethyl-8-ribityllumazine synthase Y89_0971 IPR034964 Y89_0971 Y89_0971 IPR036467 Y89_0971 Y89_0972 IPR006027 NusB/RsmB/TIM44 Y89_0972 IPR011605 NusB antitermination factor Y89_0972 IPR035926 Y89_0972 Y89_0973 IPR006283 Thiamine-monophosphate kinase Y89_0973 IPR010918 AIR synthase-related protein, C-terminal domain Y89_0973 IPR016188 PurM, N-terminal-like Y89_0973 IPR036676 Y89_0973 Y89_0973 IPR036921 Y89_0973 Y89_0974 IPR007686 YutG/PgpA domain Y89_0974 IPR026037 Phosphatidylglycerophosphatase A Y89_0974 IPR036681 Y89_0974 Y89_0975 IPR001638 Extracellular solute-binding protein, family 3 Y89_0976 IPR001969 Aspartic peptidase, active site Y89_0976 IPR011969 Peptidase aspartic, CHP02281 Y89_0976 IPR021109 Aspartic peptidase domain Y89_0977 IPR000926 GTP cyclohydrolase II, RibA Y89_0977 IPR032677 Y89_0977 Y89_0977 IPR036144 Y89_0977 Y89_0979 IPR002491 ABC transporter periplasmic binding domain Y89_0980 IPR005475 Transketolase-like, pyrimidine-binding domain Y89_0980 IPR005477 Deoxyxylulose-5-phosphate synthase Y89_0980 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Y89_0980 IPR020826 Transketolase binding site Y89_0980 IPR029061 Thiamin diphosphate-binding fold Y89_0980 IPR033248 Y89_0980 Y89_0981 IPR000092 Polyprenyl synthetase Y89_0981 IPR008949 Terpenoid synthase Y89_0981 IPR033749 Y89_0981 Y89_0982 IPR003761 Exonuclease VII, small subunit Y89_0982 IPR037004 Y89_0982 Y89_0983 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Y89_0983 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Y89_0983 IPR029017 Enolase N-terminal domain-like Y89_0983 IPR029065 Enolase C-terminal domain-like Y89_0983 IPR036849 Y89_0983 Y89_0984 IPR025641 Domain of unknown function DUF4340 Y89_0985 IPR019196 ABC-type uncharacterised transport system Y89_0987 IPR003439 ABC transporter-like Y89_0987 IPR003593 AAA+ ATPase domain Y89_0987 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_0988 IPR000014 PAS domain Y89_0988 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_0988 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_0988 IPR007890 CHASE2 Y89_0988 IPR013656 PAS fold-4 Y89_0988 IPR017181 Signal transduction histidine kinase, CHASE2/PAS sensor domain-containing, predicted Y89_0988 IPR035965 Y89_0988 Y89_0988 IPR036097 Y89_0988 Y89_0988 IPR036890 Y89_0988 Y89_0989 IPR006860 FecR protein Y89_0989 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 Y89_0990 IPR000425 Major intrinsic protein Y89_0990 IPR022357 Major intrinsic protein, conserved site Y89_0990 IPR023271 Aquaporin-like Y89_0990 IPR023743 Aquaporin Z Y89_0992 IPR001789 Signal transduction response regulator, receiver domain Y89_0992 IPR001867 Signal transduction response regulator, C-terminal Y89_0992 IPR011006 CheY-like superfamily Y89_0992 IPR036388 Y89_0992 Y89_0993 IPR008162 Inorganic pyrophosphatase Y89_0993 IPR036649 Y89_0993 Y89_0994 IPR010384 MtfA family Y89_0994 IPR024079 Metallopeptidase, catalytic domain Y89_0995 IPR032816 Y89_0995 Y89_0996 IPR011009 Protein kinase-like domain Y89_0997 IPR001638 Extracellular solute-binding protein, family 3 Y89_0998 IPR000182 GNAT domain Y89_0998 IPR016181 Acyl-CoA N-acyltransferase Y89_0999 IPR009246 Ethanolamine ammonia-lyase light chain Y89_1000 IPR010628 Ethanolamine ammonia lyase large subunit Y89_1000 IPR013785 Aldolase-type TIM barrel Y89_1001 IPR002293 Amino acid/polyamine transporter I Y89_1001 IPR004757 Ethanolamine permease Y89_1002 IPR015590 Aldehyde dehydrogenase domain Y89_1002 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_1002 IPR016161 Aldehyde/histidinol dehydrogenase Y89_1002 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_1002 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_1002 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_1003 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_1003 IPR002197 DNA binding HTH domain, Fis-type Y89_1003 IPR003018 GAF domain Y89_1003 IPR003593 AAA+ ATPase domain Y89_1003 IPR009057 Homeodomain-like Y89_1003 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_1003 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_1003 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1003 IPR029016 GAF domain-like Y89_1003 IPR035965 Y89_1003 Y89_1004 IPR000713 Mur ligase, N-terminal Y89_1004 IPR004101 Mur ligase, C-terminal Y89_1004 IPR005757 Murein peptide ligase Y89_1004 IPR013221 Mur ligase, central Y89_1004 IPR036565 Y89_1004 Y89_1004 IPR036615 Y89_1004 Y89_1005 IPR003382 Flavoprotein Y89_1005 IPR004507 Decarboxylase UbiX/Pad1 Y89_1005 IPR036551 Y89_1005 Y89_1006 IPR010780 Protein of unknown function DUF1375 Y89_1007 IPR014843 HIM1 Y89_1007 IPR036291 Y89_1007 Y89_1008 IPR001096 Peptidase C13, legumain Y89_1008 IPR003409 MORN motif Y89_1008 IPR029030 Caspase-like domain Y89_1009 IPR002539 MaoC-like domain Y89_1009 IPR029069 HotDog domain Y89_1010 IPR005538 LrgA/CidA family Y89_1011 IPR007300 CidB/LrgB family Y89_1012 IPR003111 Peptidase S16, lon N-terminal Y89_1012 IPR015947 PUA-like domain Y89_1013 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y89_1013 IPR032816 Y89_1013 Y89_1013 IPR036938 Y89_1013 Y89_1014 IPR003180 Methylpurine-DNA glycosylase (MPG) Y89_1014 IPR011034 Formyl transferase, C-terminal-like Y89_1014 IPR036995 Y89_1014 Y89_1015 IPR007213 Leucine carboxyl methyltransferase Y89_1015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1016 IPR000073 Alpha/beta hydrolase fold-1 Y89_1016 IPR029058 Alpha/Beta hydrolase fold Y89_1017 IPR000965 Gamma-glutamyl phosphate reductase GPR Y89_1017 IPR012134 Glutamate-5-semialdehyde dehydrogenase Y89_1017 IPR015590 Aldehyde dehydrogenase domain Y89_1017 IPR016161 Aldehyde/histidinol dehydrogenase Y89_1017 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_1017 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_1017 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site Y89_1018 IPR004821 Cytidyltransferase-like domain Y89_1018 IPR005248 Probable nicotinate-nucleotide adenylyltransferase Y89_1018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_1019 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Y89_1020 IPR003742 SPOUT methyltransferase, predicted Y89_1020 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y89_1020 IPR029028 Alpha/beta knot methyltransferases Y89_1021 IPR001460 Penicillin-binding protein, transpeptidase Y89_1021 IPR005311 Penicillin-binding protein, dimerisation domain Y89_1021 IPR012338 Beta-lactamase/transpeptidase-like Y89_1021 IPR017790 Penicillin-binding protein 2 Y89_1021 IPR036138 Y89_1021 Y89_1022 IPR001182 Cell cycle protein FtsW/RodA Y89_1022 IPR011923 Rod shape-determining protein RodA Y89_1022 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Y89_1023 IPR011757 Lytic transglycosylase MltB Y89_1023 IPR023346 Lysozyme-like domain Y89_1023 IPR031304 Y89_1023 Y89_1024 IPR007730 Sporulation-related domain Y89_1024 IPR009009 RlpA-like double-psi beta-barrel domain Y89_1024 IPR012997 Rare lipoprotein A, bacterial Y89_1024 IPR034718 Y89_1024 Y89_1024 IPR036680 Y89_1024 Y89_1024 IPR036908 Y89_1024 Y89_1025 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Y89_1025 IPR012338 Beta-lactamase/transpeptidase-like Y89_1025 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Y89_1025 IPR015956 Penicillin-binding protein-associated Y89_1025 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Y89_1025 IPR037167 Y89_1025 Y89_1026 IPR007454 Uncharacterised protein family UPF0250 Y89_1026 IPR027471 YbeD-like domain Y89_1027 IPR000544 Octanoyltransferase Y89_1027 IPR004143 Biotin/lipoate A/B protein ligase Y89_1027 IPR020605 Octanoyltransferase, conserved site Y89_1028 IPR003698 Lipoyl synthase Y89_1028 IPR006638 Elongator protein 3/MiaB/NifB Y89_1028 IPR007197 Radical SAM Y89_1028 IPR013785 Aldolase-type TIM barrel Y89_1028 IPR031691 Y89_1028 Y89_1029 IPR000847 Transcription regulator HTH, LysR Y89_1029 IPR005119 LysR, substrate-binding Y89_1029 IPR036388 Y89_1029 Y89_1029 IPR036390 Y89_1029 Y89_1030 IPR000073 Alpha/beta hydrolase fold-1 Y89_1030 IPR000639 Epoxide hydrolase-like Y89_1030 IPR029058 Alpha/Beta hydrolase fold Y89_1031 IPR002477 Peptidoglycan binding-like Y89_1031 IPR011970 Lytic murein transglycosylase Y89_1031 IPR023346 Lysozyme-like domain Y89_1031 IPR031304 Y89_1031 Y89_1031 IPR036365 Y89_1031 Y89_1031 IPR036366 Y89_1031 Y89_1032 IPR005589 Protein of unknown function DUF331 Y89_1033 IPR005790 DNA polymerase III, delta subunit Y89_1033 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Y89_1033 IPR010372 DNA polymerase III, delta Y89_1033 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1033 IPR032780 Y89_1033 Y89_1034 IPR007485 Lipopolysaccharide assembly, LptE Y89_1035 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Y89_1035 IPR002300 Aminoacyl-tRNA synthetase, class Ia Y89_1035 IPR002302 Leucine-tRNA ligase Y89_1035 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Y89_1035 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Y89_1035 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Y89_1035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_1035 IPR015413 Methionyl/Leucyl tRNA synthetase Y89_1035 IPR025709 Leucyl-tRNA synthetase, editing domain Y89_1037 IPR003848 Domain of unknown function DUF218 Y89_1038 IPR003010 Carbon-nitrogen hydrolase Y89_1038 IPR004563 Apolipoprotein N-acyltransferase Y89_1038 IPR036526 Y89_1038 Y89_1039 IPR000644 CBS domain Y89_1039 IPR005170 Transporter-associated domain Y89_1039 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_1039 IPR036318 Y89_1039 Y89_1040 IPR002036 Endoribonuclease YbeY Y89_1040 IPR020549 Endoribonuclease YbeY, conserved site Y89_1040 IPR023091 Metalloprotease catalytic domain, predicted Y89_1041 IPR003714 PhoH-like protein Y89_1041 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1042 IPR002792 TRAM domain Y89_1042 IPR005839 Methylthiotransferase Y89_1042 IPR006463 tRNA-i(6)A37 modification enzyme MiaB Y89_1042 IPR006638 Elongator protein 3/MiaB/NifB Y89_1042 IPR007197 Radical SAM Y89_1042 IPR013848 Methylthiotransferase, N-terminal Y89_1042 IPR020612 Methylthiotransferase, conserved site Y89_1042 IPR023404 Radical SAM, alpha/beta horseshoe Y89_1042 IPR038135 Y89_1042 Y89_1043 IPR014949 Protein of unknown function DUF1820 Y89_1044 IPR006597 Sel1-like Y89_1044 IPR011990 Tetratricopeptide-like helical domain Y89_1045 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase Y89_1045 IPR005814 Aminotransferase class-III Y89_1045 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1045 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1045 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1046 IPR013785 Aldolase-type TIM barrel Y89_1046 IPR022998 Thiamin phosphate synthase superfamily Y89_1046 IPR034291 Y89_1046 Y89_1046 IPR036206 Y89_1046 Y89_1047 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Y89_1047 IPR029056 Ribokinase-like Y89_1048 IPR001789 Signal transduction response regulator, receiver domain Y89_1048 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1048 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_1048 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_1048 IPR011006 CheY-like superfamily Y89_1048 IPR011622 7TM-DISM receptor, extracellular domain, type 2 Y89_1048 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Y89_1048 IPR036097 Y89_1048 Y89_1048 IPR036890 Y89_1048 Y89_1049 IPR001647 DNA-binding HTH domain, TetR-type Y89_1049 IPR009057 Homeodomain-like Y89_1049 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y89_1049 IPR036271 Y89_1049 Y89_1050 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_1050 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_1050 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_1050 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_1050 IPR036250 Y89_1050 Y89_1051 IPR003736 Phenylacetic acid degradation-related domain Y89_1051 IPR006683 Thioesterase superfamily Y89_1051 IPR029069 HotDog domain Y89_1052 IPR000845 Nucleoside phosphorylase domain Y89_1052 IPR011271 AMP nucleosidase Y89_1052 IPR018953 AMP nucleoside phosphorylase, N-terminal Y89_1052 IPR035994 Y89_1052 Y89_1052 IPR037109 Y89_1052 Y89_1053 IPR004027 SEC-C motif Y89_1054 IPR001279 Beta-lactamase-like Y89_1054 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D Y89_1054 IPR036866 Y89_1054 Y89_1055 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Y89_1055 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Y89_1055 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Y89_1055 IPR020103 Pseudouridine synthase, catalytic domain Y89_1056 IPR009050 Globin-like Y89_1056 IPR012292 Globin, structural domain Y89_1057 IPR021249 Protein of unknown function DUF2788 Y89_1058 IPR000485 AsnC-type HTH domain Y89_1058 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Y89_1058 IPR019887 Transcription regulator AsnC-type, C-terminal Y89_1058 IPR019888 Transcription regulator AsnC-type Y89_1058 IPR036388 Y89_1058 Y89_1058 IPR036390 Y89_1058 Y89_1060 IPR002524 Cation efflux protein Y89_1060 IPR027469 Cation efflux protein transmembrane domain Y89_1060 IPR027470 Cation efflux protein cytoplasmic domain Y89_1060 IPR036837 Y89_1060 Y89_1062 IPR001650 Helicase, C-terminal Y89_1062 IPR007502 Helicase-associated domain Y89_1062 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type Y89_1062 IPR011545 DEAD/DEAH box helicase domain Y89_1062 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal Y89_1062 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_1062 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1065 IPR005135 Endonuclease/exonuclease/phosphatase Y89_1065 IPR036691 Y89_1065 Y89_1066 IPR002347 Glucose/ribitol dehydrogenase Y89_1066 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_1066 IPR036291 Y89_1066 Y89_1067 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_1067 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_1069 IPR011251 Luciferase-like domain Y89_1069 IPR024014 Dimethyl sulphone monooxygenase SfnG Y89_1069 IPR036661 Y89_1069 Y89_1070 IPR000868 Isochorismatase-like Y89_1070 IPR036380 Y89_1070 Y89_1071 IPR018648 Protein of unknown function DUF2076 Y89_1072 IPR021139 NYN domain, limkain-b1-type Y89_1073 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site Y89_1073 IPR001650 Helicase, C-terminal Y89_1073 IPR011545 DEAD/DEAH box helicase domain Y89_1073 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_1073 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1074 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Y89_1074 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 Y89_1074 IPR023166 HI0933 insert-like domain Y89_1074 IPR036188 Y89_1074 Y89_1075 IPR000792 Transcription regulator LuxR, C-terminal Y89_1075 IPR001789 Signal transduction response regulator, receiver domain Y89_1075 IPR011006 CheY-like superfamily Y89_1075 IPR016032 Signal transduction response regulator, C-terminal effector Y89_1075 IPR036388 Y89_1075 Y89_1076 IPR001633 EAL domain Y89_1076 IPR001789 Signal transduction response regulator, receiver domain Y89_1076 IPR011006 CheY-like superfamily Y89_1076 IPR035919 Y89_1076 Y89_1077 IPR000014 PAS domain Y89_1077 IPR001638 Extracellular solute-binding protein, family 3 Y89_1077 IPR001789 Signal transduction response regulator, receiver domain Y89_1077 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1077 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_1077 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_1077 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_1077 IPR011006 CheY-like superfamily Y89_1077 IPR013656 PAS fold-4 Y89_1077 IPR035965 Y89_1077 Y89_1077 IPR036097 Y89_1077 Y89_1077 IPR036641 Y89_1077 Y89_1077 IPR036890 Y89_1077 Y89_1078 IPR000182 GNAT domain Y89_1078 IPR016181 Acyl-CoA N-acyltransferase Y89_1079 IPR000182 GNAT domain Y89_1079 IPR016181 Acyl-CoA N-acyltransferase Y89_1080 IPR000415 Nitroreductase-like Y89_1080 IPR029479 Nitroreductase Y89_1081 IPR003703 Acyl-CoA thioesterase Y89_1081 IPR029069 HotDog domain Y89_1082 IPR006439 HAD hydrolase, subfamily IA Y89_1082 IPR023214 HAD-like domain Y89_1082 IPR036412 Y89_1082 Y89_1083 IPR000119 Histone-like bacterial DNA-binding protein Y89_1083 IPR010992 Integration host factor (IHF)-like DNA-binding domain Y89_1084 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_1084 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_1084 IPR037069 Y89_1084 Y89_1085 IPR001638 Extracellular solute-binding protein, family 3 Y89_1085 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA Y89_1085 IPR015168 SsuA/THI5-like Y89_1086 IPR003439 ABC transporter-like Y89_1086 IPR003593 AAA+ ATPase domain Y89_1086 IPR017871 ABC transporter, conserved site Y89_1086 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1087 IPR000515 MetI-like domain Y89_1087 IPR035906 Y89_1087 Y89_1088 IPR003819 Taurine catabolism dioxygenase TauD/TfdA Y89_1089 IPR004813 Oligopeptide transporter, OPT superfamily Y89_1089 IPR004814 Oligopeptide transporter HI_0561 Y89_1090 IPR000060 BCCT transporter family Y89_1090 IPR018093 BCCT transporter, conserved site Y89_1092 IPR004872 Lipoprotein NlpA family Y89_1093 IPR002585 Cytochrome d ubiquinol oxidase, subunit I Y89_1094 IPR003317 Cytochrome d ubiquinol oxidase, subunit II Y89_1095 IPR018895 Protein of unknown function DUF2474 Y89_1096 IPR009057 Homeodomain-like Y89_1096 IPR011051 RmlC-like cupin domain Y89_1096 IPR014710 RmlC-like jelly roll fold Y89_1096 IPR018060 DNA binding HTH domain, AraC-type Y89_1096 IPR018062 HTH domain AraC-type, conserved site Y89_1097 IPR011701 Major facilitator superfamily Y89_1097 IPR036259 Y89_1097 Y89_1098 IPR002155 Thiolase Y89_1098 IPR016039 Thiolase-like Y89_1098 IPR020610 Thiolase, active site Y89_1098 IPR020615 Thiolase, acyl-enzyme intermediate active site Y89_1098 IPR020616 Thiolase, N-terminal Y89_1098 IPR020617 Thiolase, C-terminal Y89_1099 IPR000873 AMP-dependent synthetase/ligase Y89_1099 IPR025110 AMP-binding enzyme C-terminal domain Y89_1100 IPR010727 Protein of unknown function DUF1302 Y89_1101 IPR010752 Protein of unknown function DUF1329 Y89_1102 IPR000792 Transcription regulator LuxR, C-terminal Y89_1102 IPR011990 Tetratricopeptide-like helical domain Y89_1102 IPR016032 Signal transduction response regulator, C-terminal effector Y89_1102 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1102 IPR036388 Y89_1102 Y89_1103 IPR001757 Cation-transporting P-type ATPase Y89_1103 IPR006121 Heavy metal-associated domain, HMA Y89_1103 IPR006122 Heavy metal-associated domain, copper ion-binding Y89_1103 IPR008250 P-type ATPase, A domain Y89_1103 IPR017969 Heavy-metal-associated, conserved site Y89_1103 IPR018303 P-type ATPase, phosphorylation site Y89_1103 IPR023214 HAD-like domain Y89_1103 IPR023298 P-type ATPase, transmembrane domain Y89_1103 IPR023299 P-type ATPase, cytoplasmic domain N Y89_1103 IPR027256 Cation-transporting P-type ATPase, subfamily IB Y89_1103 IPR036163 Y89_1103 Y89_1103 IPR036412 Y89_1103 Y89_1104 IPR002716 PIN domain Y89_1104 IPR003714 PhoH-like protein Y89_1104 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1104 IPR029060 PIN domain-like Y89_1105 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain Y89_1105 IPR023045 Molybdenum cofactor biosynthesis C Y89_1105 IPR036522 Y89_1105 Y89_1106 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Y89_1106 IPR012675 Beta-grasp domain Y89_1106 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Y89_1107 IPR003448 Molybdopterin biosynthesis MoaE Y89_1107 IPR036563 Y89_1107 Y89_1108 IPR001453 Molybdopterin binding domain Y89_1108 IPR012245 Molybdenum cofactor biosynthesis protein MoaB Y89_1108 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria Y89_1108 IPR036425 Y89_1108 Y89_1109 IPR001453 Molybdopterin binding domain Y89_1109 IPR005110 MoeA, N-terminal and linker domain Y89_1109 IPR005111 MoeA, C-terminal, domain IV Y89_1109 IPR036135 Y89_1109 Y89_1109 IPR036425 Y89_1109 Y89_1109 IPR036688 Y89_1109 Y89_1110 IPR001539 Peptidase U32 Y89_1111 IPR001539 Peptidase U32 Y89_1112 IPR003033 SCP2 sterol-binding domain Y89_1112 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT Y89_1112 IPR036527 Y89_1112 Y89_1113 IPR018946 Alkaline phosphatase D-related Y89_1113 IPR032093 Y89_1113 Y89_1113 IPR038607 Y89_1113 Y89_1114 IPR001322 Lamin Tail Domain Y89_1114 IPR005135 Endonuclease/exonuclease/phosphatase Y89_1114 IPR036691 Y89_1114 Y89_1115 IPR016929 Uncharacterised conserved protein UCP029636 Y89_1115 IPR028969 Immunity protein 32 Y89_1116 IPR028904 Tox-REase-5 domain Y89_1118 IPR025391 Domain of unknown function DUF4123 Y89_1119 IPR008727 PAAR motif Y89_1120 IPR000795 Elongation factor, GTP-binding domain Y89_1120 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Y89_1120 IPR004548 Peptide chain release factor 3 Y89_1120 IPR005225 Small GTP-binding protein domain Y89_1120 IPR009000 Translation protein, beta-barrel domain Y89_1120 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1120 IPR031157 Y89_1120 Y89_1120 IPR032090 Y89_1120 Y89_1120 IPR035647 Y89_1120 Y89_1120 IPR038467 Y89_1120 Y89_1121 IPR014453 Inhibitor of vertebrate lysozyme Y89_1121 IPR036501 Y89_1121 Y89_1122 IPR000531 TonB-dependent receptor, beta-barrel Y89_1122 IPR010105 TonB-dependent siderophore receptor Y89_1122 IPR010917 TonB-dependent receptor, conserved site Y89_1122 IPR011662 Secretin/TonB, short N-terminal Y89_1122 IPR012910 TonB-dependent receptor, plug Y89_1122 IPR036942 Y89_1122 Y89_1122 IPR037066 Y89_1122 Y89_1123 IPR006860 FecR protein Y89_1123 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_1123 IPR032623 Y89_1123 Y89_1124 IPR007627 RNA polymerase sigma-70 region 2 Y89_1124 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_1124 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_1124 IPR013325 RNA polymerase sigma factor, region 2 Y89_1124 IPR014284 RNA polymerase sigma-70 like domain Y89_1124 IPR036388 Y89_1124 Y89_1125 IPR009057 Homeodomain-like Y89_1125 IPR018060 DNA binding HTH domain, AraC-type Y89_1125 IPR018062 HTH domain AraC-type, conserved site Y89_1125 IPR020449 Transcription regulator HTH, AraC- type Y89_1126 IPR000620 Drug/metabolite transporter Y89_1127 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y89_1127 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Y89_1127 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y89_1127 IPR036291 Y89_1127 Y89_1128 IPR000847 Transcription regulator HTH, LysR Y89_1128 IPR005119 LysR, substrate-binding Y89_1128 IPR036388 Y89_1128 Y89_1128 IPR036390 Y89_1128 Y89_1129 IPR003423 Outer membrane efflux protein Y89_1129 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_1130 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein Y89_1131 IPR012451 Protein of unknown function DUF1656 Y89_1132 IPR006143 RND efflux pump, membrane fusion protein Y89_1132 IPR039562 Y89_1132 Y89_1133 IPR000644 CBS domain Y89_1133 IPR003439 ABC transporter-like Y89_1133 IPR003593 AAA+ ATPase domain Y89_1133 IPR005892 Glycine betaine transport ATP-binding subunit Y89_1133 IPR017871 ABC transporter, conserved site Y89_1133 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1134 IPR000515 MetI-like domain Y89_1134 IPR035906 Y89_1134 Y89_1135 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain Y89_1136 IPR000515 MetI-like domain Y89_1136 IPR035906 Y89_1136 Y89_1137 IPR006153 Cation/H+ exchanger Y89_1137 IPR038770 Y89_1137 Y89_1140 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 Y89_1140 IPR006357 HAD-superfamily hydrolase, subfamily IIA Y89_1140 IPR023214 HAD-like domain Y89_1140 IPR036412 Y89_1140 Y89_1141 IPR004861 Protein-tyrosine phosphatase, SIW14-like Y89_1141 IPR016130 Protein-tyrosine phosphatase, active site Y89_1141 IPR029021 Protein-tyrosine phosphatase-like Y89_1143 IPR002347 Glucose/ribitol dehydrogenase Y89_1143 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_1143 IPR036291 Y89_1143 Y89_1144 IPR013216 Methyltransferase type 11 Y89_1144 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1146 IPR014958 DGC Y89_1147 IPR000792 Transcription regulator LuxR, C-terminal Y89_1147 IPR001789 Signal transduction response regulator, receiver domain Y89_1147 IPR011006 CheY-like superfamily Y89_1147 IPR016032 Signal transduction response regulator, C-terminal effector Y89_1148 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1148 IPR003660 HAMP linker domain Y89_1148 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Y89_1148 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing Y89_1148 IPR029095 NarX-like, N-terminal Y89_1148 IPR036890 Y89_1148 Y89_1149 IPR011701 Major facilitator superfamily Y89_1149 IPR036259 Y89_1149 Y89_1150 IPR004737 Nitrate transporter Y89_1150 IPR011701 Major facilitator superfamily Y89_1150 IPR036259 Y89_1150 Y89_1151 IPR006468 Nitrate reductase, alpha subunit Y89_1151 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site Y89_1151 IPR006656 Molybdopterin oxidoreductase Y89_1151 IPR006657 Molydopterin dinucleotide-binding domain Y89_1151 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Y89_1151 IPR009010 Aspartate decarboxylase-like domain Y89_1151 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site Y89_1151 IPR028189 Nitrate reductase, alpha subunit, N-terminal Y89_1152 IPR006547 Nitrate reductase, beta subunit Y89_1152 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_1152 IPR029263 Respiratory nitrate reductase beta, C-terminal Y89_1152 IPR038262 Y89_1152 Y89_1153 IPR003765 Nitrate reductase chaperone, NarJ Y89_1153 IPR020945 DMSO/Nitrate reductase chaperone Y89_1153 IPR036411 Y89_1153 Y89_1154 IPR003816 Nitrate reductase, gamma subunit Y89_1154 IPR023234 NarG-like domain Y89_1154 IPR036197 Y89_1154 Y89_1155 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Y89_1155 IPR027304 Trigger factor/SurA domain Y89_1156 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Y89_1156 IPR006638 Elongator protein 3/MiaB/NifB Y89_1156 IPR007197 Radical SAM Y89_1156 IPR010505 Molybdenum cofactor synthesis C-terminal Y89_1156 IPR013483 Molybdenum cofactor biosynthesis protein A Y89_1156 IPR013785 Aldolase-type TIM barrel Y89_1157 IPR000572 Oxidoreductase, molybdopterin-binding domain Y89_1157 IPR036374 Y89_1157 Y89_1158 IPR000531 TonB-dependent receptor, beta-barrel Y89_1158 IPR012910 TonB-dependent receptor, plug Y89_1158 IPR036942 Y89_1158 Y89_1158 IPR037066 Y89_1158 Y89_1159 IPR001638 Extracellular solute-binding protein, family 3 Y89_1159 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein Y89_1160 IPR013559 YheO-like Y89_1160 IPR039445 Y89_1160 Y89_1161 IPR006076 FAD dependent oxidoreductase Y89_1161 IPR036188 Y89_1161 Y89_1162 IPR003462 Ornithine cyclodeaminase/mu-crystallin Y89_1162 IPR023401 Ornithine cyclodeaminase, N-terminal Y89_1162 IPR036291 Y89_1162 Y89_1163 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site Y89_1163 IPR001650 Helicase, C-terminal Y89_1163 IPR011545 DEAD/DEAH box helicase domain Y89_1163 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_1163 IPR023554 RNA helicase, ATP-dependent, RhlB-type Y89_1163 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1164 IPR000873 AMP-dependent synthetase/ligase Y89_1164 IPR020845 AMP-binding, conserved site Y89_1164 IPR025110 AMP-binding enzyme C-terminal domain Y89_1165 IPR003140 Phospholipase/carboxylesterase/thioesterase Y89_1165 IPR029058 Alpha/Beta hydrolase fold Y89_1166 IPR001638 Extracellular solute-binding protein, family 3 Y89_1166 IPR018313 Extracellular solute-binding protein, family 3, conserved site Y89_1167 IPR000462 CDP-alcohol phosphatidyltransferase Y89_1167 IPR026027 Phosphatidylcholine synthase Pcs Y89_1168 IPR032710 Y89_1168 Y89_1168 IPR037401 Y89_1168 Y89_1169 IPR012336 Thioredoxin-like fold Y89_1169 IPR033468 Y89_1169 Y89_1169 IPR036249 Y89_1169 Y89_1169 IPR036282 Y89_1169 Y89_1170 IPR000305 GIY-YIG nuclease superfamily Y89_1170 IPR035901 Y89_1170 Y89_1171 IPR001451 Bacterial transferase hexapeptide repeat Y89_1171 IPR011004 Trimeric LpxA-like Y89_1171 IPR018357 Hexapeptide transferase, conserved site Y89_1172 IPR004045 Glutathione S-transferase, N-terminal Y89_1172 IPR036249 Y89_1172 Y89_1172 IPR036282 Y89_1172 Y89_1173 IPR008217 Domain of unknown function DUF125, transmembrane Y89_1175 IPR007358 Nucleoid-associated protein NdpA Y89_1176 IPR011852 TRAP transporter solute receptor, TAXI family Y89_1177 IPR023393 START-like domain Y89_1178 IPR000868 Isochorismatase-like Y89_1178 IPR036380 Y89_1178 Y89_1179 IPR000847 Transcription regulator HTH, LysR Y89_1179 IPR005119 LysR, substrate-binding Y89_1179 IPR036388 Y89_1179 Y89_1179 IPR036390 Y89_1179 Y89_1180 IPR004045 Glutathione S-transferase, N-terminal Y89_1180 IPR036249 Y89_1180 Y89_1180 IPR036282 Y89_1180 Y89_1181 IPR018681 Protein of unknown function DUF2165, transmembrane Y89_1182 IPR005416 Type III secretion chaperone SycE Y89_1182 IPR010261 Tir chaperone protein (CesT) family Y89_1183 IPR003537 Yersinia virulence determinant YopE Y89_1183 IPR003540 ADP ribosyltransferase Y89_1183 IPR014773 Virulence factor YopE uncharacterised domain Y89_1183 IPR037168 Y89_1183 Y89_1184 IPR010286 Ribosomal RNA large subunit methyltransferase F-like Y89_1184 IPR016909 Ribosomal RNA large subunit methyltransferase F Y89_1184 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1185 IPR004680 Citrate transporter-like domain Y89_1185 IPR006037 Regulator of K+ conductance, C-terminal Y89_1185 IPR031312 Y89_1185 Y89_1185 IPR036721 Y89_1185 Y89_1186 IPR003439 ABC transporter-like Y89_1186 IPR003593 AAA+ ATPase domain Y89_1186 IPR017871 ABC transporter, conserved site Y89_1186 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1187 IPR001851 ABC transporter, permease Y89_1188 IPR007487 ABC transporter, substrate-binding protein Y89_1188 IPR028082 Periplasmic binding protein-like I Y89_1192 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Y89_1192 IPR002300 Aminoacyl-tRNA synthetase, class Ia Y89_1192 IPR002303 Valine-tRNA ligase Y89_1192 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Y89_1192 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Y89_1192 IPR010978 tRNA-binding arm Y89_1192 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Y89_1192 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_1192 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm Y89_1192 IPR037118 Y89_1192 Y89_1194 IPR007459 DNA polymerase III chi subunit, HolC Y89_1194 IPR036768 Y89_1194 Y89_1195 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal Y89_1195 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal Y89_1195 IPR011356 Leucine aminopeptidase/peptidase B Y89_1195 IPR023042 Peptidase M17, leucine aminopeptidase Y89_1196 IPR009057 Homeodomain-like Y89_1196 IPR011051 RmlC-like cupin domain Y89_1196 IPR013096 Cupin 2, conserved barrel Y89_1196 IPR014710 RmlC-like jelly roll fold Y89_1196 IPR018060 DNA binding HTH domain, AraC-type Y89_1196 IPR018062 HTH domain AraC-type, conserved site Y89_1196 IPR020449 Transcription regulator HTH, AraC- type Y89_1197 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain Y89_1197 IPR029058 Alpha/Beta hydrolase fold Y89_1198 IPR005495 Permease YjgP/YjgQ, predicted Y89_1198 IPR030922 Y89_1198 Y89_1199 IPR005495 Permease YjgP/YjgQ, predicted Y89_1199 IPR030923 Y89_1199 Y89_1200 IPR010432 RDD Y89_1201 IPR001633 EAL domain Y89_1201 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain Y89_1201 IPR035919 Y89_1201 Y89_1202 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA Y89_1202 IPR036100 Y89_1202 Y89_1203 IPR002616 tRNA-guanine(15) transglycosylase-like Y89_1203 IPR004803 Queuine tRNA-ribosyltransferase Y89_1203 IPR036511 Y89_1203 Y89_1204 IPR003849 Preprotein translocase YajC Y89_1205 IPR005791 Protein translocase subunit SecD Y89_1205 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Y89_1205 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Y89_1205 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Y89_1205 IPR027398 SecD export protein N-terminal TM domain Y89_1206 IPR005665 Protein-export membrane protein SecF, bacterial Y89_1206 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Y89_1206 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Y89_1206 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Y89_1207 IPR008816 Glycine zipper 2TM domain Y89_1208 IPR000760 Inositol monophosphatase Y89_1208 IPR020550 Inositol monophosphatase, conserved site Y89_1208 IPR020583 Inositol monophosphatase, metal-binding site Y89_1208 IPR022337 Inositol monophosphatase, SuhB Y89_1209 IPR001537 tRNA/rRNA methyltransferase, SpoU type Y89_1209 IPR004384 RNA methyltransferase TrmH, group 1 Y89_1209 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y89_1209 IPR029028 Alpha/beta knot methyltransferases Y89_1210 IPR001451 Bacterial transferase hexapeptide repeat Y89_1210 IPR005881 Serine O-acetyltransferase Y89_1210 IPR011004 Trimeric LpxA-like Y89_1211 IPR000944 Transcription regulator Rrf2-like Y89_1211 IPR010242 Transcription factor HTH, IscR Y89_1211 IPR036388 Y89_1211 Y89_1211 IPR036390 Y89_1211 Y89_1212 IPR000192 Aminotransferase class V domain Y89_1212 IPR010240 Cysteine desulfurase Y89_1212 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1212 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1212 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1212 IPR016454 Cysteine desulfurase, NifS Y89_1212 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site Y89_1213 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal Y89_1213 IPR011339 ISC system FeS cluster assembly, IscU scaffold Y89_1214 IPR000361 FeS cluster biogenesis Y89_1214 IPR011302 ISC system FeS cluster assembly, IscA scaffold Y89_1214 IPR016092 FeS cluster insertion protein Y89_1214 IPR017870 FeS cluster insertion, C-terminal, conserved site Y89_1214 IPR035903 Y89_1214 Y89_1215 IPR001623 DnaJ domain Y89_1215 IPR004640 Co-chaperone Hsc20 Y89_1215 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain Y89_1215 IPR036386 Y89_1215 Y89_1215 IPR036869 Y89_1215 Y89_1216 IPR010236 ISC system FeS cluster assembly, HscA chaperone Y89_1216 IPR013126 Heat shock protein 70 family Y89_1216 IPR018181 Heat shock protein 70, conserved site Y89_1216 IPR029047 Heat shock protein 70kD, peptide-binding domain Y89_1216 IPR029048 Heat shock protein 70kD, C-terminal domain Y89_1217 IPR001041 2Fe-2S ferredoxin-type domain Y89_1217 IPR001055 Adrenodoxin Y89_1217 IPR011536 Ferredoxin, 2Fe-2S type Y89_1217 IPR012675 Beta-grasp domain Y89_1217 IPR018298 Adrenodoxin, iron-sulphur binding site Y89_1217 IPR036010 Y89_1217 Y89_1218 IPR007479 ISC system FeS cluster assembly, IscX Y89_1218 IPR036762 Y89_1218 Y89_1219 IPR001564 Nucleoside diphosphate kinase Y89_1219 IPR023005 Nucleoside diphosphate kinase, active site Y89_1219 IPR034907 Y89_1219 Y89_1219 IPR036850 Y89_1219 Y89_1220 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr Y89_1220 IPR007197 Radical SAM Y89_1220 IPR013785 Aldolase-type TIM barrel Y89_1220 IPR027492 Dual-specificity RNA methyltransferase RlmN Y89_1221 IPR011990 Tetratricopeptide-like helical domain Y89_1221 IPR013360 Pilus biogenesis/stability type IV, PilW Y89_1221 IPR019734 Tetratricopeptide repeat Y89_1222 IPR000943 RNA polymerase sigma-70 Y89_1222 IPR001387 Cro/C1-type helix-turn-helix domain Y89_1222 IPR010982 Lambda repressor-like, DNA-binding domain Y89_1222 IPR025194 Domain of unknown function DUF4115 Y89_1223 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type Y89_1223 IPR011005 Dihydropteroate synthase-like Y89_1223 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial Y89_1224 IPR004154 Anticodon-binding Y89_1224 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Y89_1224 IPR015807 Histidine-tRNA ligase Y89_1224 IPR036621 Y89_1224 Y89_1225 IPR011990 Tetratricopeptide-like helical domain Y89_1225 IPR018704 Domain of unknown function DUF09976 Y89_1225 IPR026039 Uncharacterised protein family UPF0070 Y89_1226 IPR002372 Pyrrolo-quinoline quinone repeat Y89_1226 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily Y89_1226 IPR015943 WD40/YVTN repeat-like-containing domain Y89_1226 IPR017687 Outer membrane protein assembly factor BamB Y89_1226 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Y89_1227 IPR005225 Small GTP-binding protein domain Y89_1227 IPR006073 GTP binding domain Y89_1227 IPR015946 K homology domain-like, alpha/beta Y89_1227 IPR016484 GTP-binding protein EngA Y89_1227 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1227 IPR032859 Y89_1227 Y89_1228 IPR004839 Aminotransferase, class I/classII Y89_1228 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1228 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1228 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1229 IPR003010 Carbon-nitrogen hydrolase Y89_1229 IPR036526 Y89_1229 Y89_1230 IPR009282 Protein of unknown function DUF937 Y89_1230 IPR027405 YidB-like Y89_1231 IPR023210 NADP-dependent oxidoreductase domain Y89_1231 IPR036812 Y89_1231 Y89_1234 IPR000891 Pyruvate carboxyltransferase Y89_1234 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Y89_1234 IPR005668 2-isopropylmalate synthase Y89_1234 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Y89_1234 IPR013785 Aldolase-type TIM barrel Y89_1234 IPR036230 Y89_1234 Y89_1235 IPR021333 Protein of unknown function DUF2946 Y89_1236 IPR000531 TonB-dependent receptor, beta-barrel Y89_1236 IPR010100 TonB-dependent copper receptor Y89_1236 IPR012910 TonB-dependent receptor, plug Y89_1236 IPR036942 Y89_1236 Y89_1236 IPR037066 Y89_1236 Y89_1237 IPR005625 PepSY-associated TM helix Y89_1237 IPR025711 PepSY domain Y89_1238 IPR025597 Protein of unknown function DUF4345 Y89_1239 IPR011055 Duplicated hybrid motif Y89_1239 IPR016047 Peptidase M23 Y89_1240 IPR021333 Protein of unknown function DUF2946 Y89_1241 IPR007410 DR1885-like metal-binding protein Y89_1241 IPR036182 Y89_1241 Y89_1242 IPR023973 Conserved hypothetical protein CHP04061, AZL007950 Y89_1243 IPR000868 Isochorismatase-like Y89_1243 IPR036380 Y89_1243 Y89_1244 IPR002818 ThiJ/PfpI Y89_1244 IPR009057 Homeodomain-like Y89_1244 IPR018060 DNA binding HTH domain, AraC-type Y89_1244 IPR029062 Class I glutamine amidotransferase-like Y89_1245 IPR000755 Peptidase M15D, VanX D-ala-D-ala dipeptidase Y89_1245 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Y89_1246 IPR004681 TRAP transporter permease protein Y89_1246 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Y89_1247 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component Y89_1248 IPR018389 Bacterial extracellular solute-binding protein, family 7 Y89_1248 IPR038404 Y89_1248 Y89_1249 IPR000847 Transcription regulator HTH, LysR Y89_1249 IPR005119 LysR, substrate-binding Y89_1249 IPR036388 Y89_1249 Y89_1249 IPR036390 Y89_1249 Y89_1250 IPR003753 Exonuclease VII, large subunit Y89_1250 IPR020579 Exonuclease VII, large subunit, C-terminal Y89_1250 IPR025824 OB-fold nucleic acid binding domain Y89_1251 IPR000847 Transcription regulator HTH, LysR Y89_1251 IPR005119 LysR, substrate-binding Y89_1251 IPR036388 Y89_1251 Y89_1251 IPR036390 Y89_1251 Y89_1252 IPR002781 Transmembrane protein TauE like Y89_1253 IPR000286 Histone deacetylase superfamily Y89_1253 IPR023696 Ureohydrolase domain Y89_1253 IPR023801 Histone deacetylase domain Y89_1253 IPR037138 Y89_1253 Y89_1254 IPR011701 Major facilitator superfamily Y89_1254 IPR036259 Y89_1254 Y89_1255 IPR025737 MetA-pathway of phenol degradation, putative Y89_1256 IPR000792 Transcription regulator LuxR, C-terminal Y89_1256 IPR016032 Signal transduction response regulator, C-terminal effector Y89_1256 IPR036388 Y89_1256 Y89_1257 IPR000644 CBS domain Y89_1257 IPR001093 IMP dehydrogenase/GMP reductase Y89_1257 IPR005990 Inosine-5'-monophosphate dehydrogenase Y89_1257 IPR013785 Aldolase-type TIM barrel Y89_1257 IPR015875 IMP dehydrogenase / GMP reductase, conserved site Y89_1258 IPR001674 GMP synthase, C-terminal Y89_1258 IPR004739 GMP synthase, N-terminal Y89_1258 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_1258 IPR017926 Glutamine amidotransferase Y89_1258 IPR022310 NAD/GMP synthase Y89_1258 IPR022955 GMP synthase Y89_1258 IPR029062 Class I glutamine amidotransferase-like Y89_1259 IPR002355 Multicopper oxidase, copper-binding site Y89_1259 IPR008972 Cupredoxin Y89_1259 IPR011706 Multicopper oxidase, type 2 Y89_1259 IPR011707 Multicopper oxidase, type 3 Y89_1259 IPR033138 Y89_1259 Y89_1260 IPR016192 APOBEC/CMP deaminase, zinc-binding Y89_1260 IPR016193 Cytidine deaminase-like Y89_1260 IPR028883 tRNA-specific adenosine deaminase Y89_1261 IPR002293 Amino acid/polyamine transporter I Y89_1261 IPR018227 Tryptophan/tyrosine permease Y89_1262 IPR018715 Protein of unknown function DUF2239 Y89_1263 IPR000189 Prokaryotic transglycosylase, active site Y89_1263 IPR001638 Extracellular solute-binding protein, family 3 Y89_1263 IPR008258 Lytic transglycosylase-like SLT domain Y89_1263 IPR023346 Lysozyme-like domain Y89_1263 IPR023703 Membrane-bound lytic murein transglycosylase F Y89_1264 IPR010073 Phosphoribosylformylglycinamidine synthase Y89_1264 IPR010918 AIR synthase-related protein, C-terminal domain Y89_1264 IPR029062 Class I glutamine amidotransferase-like Y89_1264 IPR036604 Y89_1264 Y89_1264 IPR036676 Y89_1264 Y89_1264 IPR036921 Y89_1264 Y89_1265 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Y89_1265 IPR036069 Y89_1265 Y89_1266 IPR001996 Phosphotransferase system, IIB component, type 1 Y89_1266 IPR003352 Phosphotransferase system, EIIC Y89_1266 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component Y89_1266 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site Y89_1266 IPR036878 Y89_1266 Y89_1267 IPR000032 Phosphocarrier HPr protein-like Y89_1267 IPR000121 PEP-utilising enzyme, C-terminal Y89_1267 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Y89_1267 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 Y89_1267 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Y89_1267 IPR006318 Phosphoenolpyruvate-utilising enzyme Y89_1267 IPR008279 PEP-utilising enzyme, mobile domain Y89_1267 IPR008731 Phosphotransferase system, enzyme I N-terminal Y89_1267 IPR011055 Duplicated hybrid motif Y89_1267 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_1267 IPR023151 PEP-utilising enzyme, conserved site Y89_1267 IPR035895 Y89_1267 Y89_1267 IPR036618 Y89_1267 Y89_1267 IPR036637 Y89_1267 Y89_1268 IPR001347 Sugar isomerase (SIS) Y89_1269 IPR003764 N-acetylglucosamine-6-phosphate deacetylase Y89_1269 IPR006680 Amidohydrolase 1 Y89_1269 IPR011059 Metal-dependent hydrolase, composite domain Y89_1269 IPR032466 Y89_1269 Y89_1270 IPR000524 Transcription regulator HTH, GntR Y89_1270 IPR011663 UbiC transcription regulator-associated Y89_1270 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Y89_1270 IPR036388 Y89_1270 Y89_1270 IPR036390 Y89_1270 Y89_1272 IPR000086 NUDIX hydrolase domain Y89_1272 IPR015797 NUDIX hydrolase domain-like Y89_1272 IPR020084 NUDIX hydrolase, conserved site Y89_1272 IPR029401 Nudix hydrolase, N-terminal Y89_1273 IPR000086 NUDIX hydrolase domain Y89_1273 IPR015797 NUDIX hydrolase domain-like Y89_1274 IPR001451 Bacterial transferase hexapeptide repeat Y89_1274 IPR011004 Trimeric LpxA-like Y89_1275 IPR010710 Protein of unknown function DUF1289 Y89_1276 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Y89_1276 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Y89_1276 IPR005862 Phosphoribosylglycinamide formyltransferase 2 Y89_1276 IPR013815 ATP-grasp fold, subdomain 1 Y89_1276 IPR016185 Pre-ATP-grasp domain Y89_1277 IPR013830 Y89_1277 Y89_1277 IPR036514 Y89_1277 Y89_1278 IPR004736 Citrate-proton symport Y89_1278 IPR005828 General substrate transporter Y89_1278 IPR005829 Sugar transporter, conserved site Y89_1278 IPR036259 Y89_1278 Y89_1279 IPR000644 CBS domain Y89_1279 IPR002550 Domain of unknown function DUF21 Y89_1279 IPR005170 Transporter-associated domain Y89_1279 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_1279 IPR036318 Y89_1279 Y89_1280 IPR002541 Cytochrome c assembly protein Y89_1281 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Y89_1281 IPR003593 AAA+ ATPase domain Y89_1281 IPR004125 Signal recognition particle, SRP54 subunit, M-domain Y89_1281 IPR004780 Signal recognition particle protein Ffh Y89_1281 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle Y89_1281 IPR022941 Signal recognition particle, SRP54 subunit Y89_1281 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1281 IPR036891 Y89_1281 Y89_1282 IPR000307 Ribosomal protein S16 Y89_1282 IPR023803 Ribosomal protein S16 domain Y89_1283 IPR002676 RimM protein Y89_1283 IPR009000 Translation protein, beta-barrel domain Y89_1283 IPR011033 PRC-barrel-like Y89_1283 IPR011961 16S rRNA processing protein RimM Y89_1283 IPR027275 PRC-barrel domain Y89_1283 IPR036976 Y89_1283 Y89_1284 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria Y89_1284 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain Y89_1284 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal Y89_1284 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y89_1284 IPR029028 Alpha/beta knot methyltransferases Y89_1285 IPR001857 Ribosomal protein L19 Y89_1285 IPR008991 Translation protein SH3-like domain Y89_1285 IPR018257 Ribosomal protein L19, conserved site Y89_1285 IPR038657 Y89_1285 Y89_1286 IPR006683 Thioesterase superfamily Y89_1286 IPR029069 HotDog domain Y89_1287 IPR037257 Y89_1287 Y89_1288 IPR003148 Regulator of K+ conductance, N-terminal Y89_1288 IPR006153 Cation/H+ exchanger Y89_1288 IPR036291 Y89_1288 Y89_1288 IPR038770 Y89_1288 Y89_1289 IPR002104 Integrase, catalytic Y89_1289 IPR004107 Integrase, SAM-like, N-terminal Y89_1289 IPR010998 Integrase, Lambda-type, N-terminal Y89_1289 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_1289 IPR011932 Tyrosine recombinase XerD Y89_1289 IPR013762 Integrase-like, catalytic core Y89_1289 IPR023009 Tyrosine recombinase XerC/XerD Y89_1290 IPR009094 Disulphide bond isomerase, DsbC, N-terminal Y89_1290 IPR012336 Thioredoxin-like fold Y89_1290 IPR017937 Thioredoxin, conserved site Y89_1290 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal Y89_1290 IPR036249 Y89_1290 Y89_1292 IPR001342 Homoserine dehydrogenase, catalytic Y89_1292 IPR002912 ACT domain Y89_1292 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding Y89_1292 IPR016204 Homoserine dehydrogenase Y89_1292 IPR019811 Homoserine dehydrogenase, conserved site Y89_1292 IPR036291 Y89_1292 Y89_1293 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Y89_1293 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_1293 IPR004450 Threonine synthase-like Y89_1293 IPR029144 Threonine synthase, N-terminal Y89_1293 IPR036052 Y89_1293 Y89_1293 IPR037158 Y89_1293 Y89_1294 IPR017395 Chlorophyllase, chloroplast Y89_1294 IPR029058 Alpha/Beta hydrolase fold Y89_1295 IPR021898 Protein of unknown function DUF3509 Y89_1296 IPR003673 CoA-transferase family III Y89_1296 IPR023606 CoA-transferase family III domain Y89_1297 IPR019231 Protein of unknown function DUF2170 Y89_1298 IPR007157 PspA/IM30 Y89_1300 IPR036013 Y89_1300 Y89_1301 IPR011704 ATPase, dynein-related, AAA domain Y89_1301 IPR020958 DUF3686 Y89_1301 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1302 IPR025202 Phospholipase D-like domain Y89_1303 IPR009822 YaeQ Y89_1303 IPR011335 Restriction endonuclease type II-like Y89_1303 IPR038590 Y89_1303 Y89_1304 IPR001667 DDH domain Y89_1304 IPR003156 DHHA1 domain Y89_1304 IPR004610 Bacterial RecJ exonuclease Y89_1304 IPR038763 Y89_1304 Y89_1305 IPR001570 Peptidase M4, C-terminal Y89_1305 IPR011096 FTP domain Y89_1305 IPR013856 Peptidase M4 domain Y89_1305 IPR023612 Peptidase M4 Y89_1305 IPR025711 PepSY domain Y89_1305 IPR027268 Y89_1305 Y89_1308 IPR011701 Major facilitator superfamily Y89_1308 IPR036259 Y89_1308 Y89_1310 IPR032774 Y89_1310 Y89_1312 IPR000792 Transcription regulator LuxR, C-terminal Y89_1312 IPR001789 Signal transduction response regulator, receiver domain Y89_1312 IPR011006 CheY-like superfamily Y89_1312 IPR016032 Signal transduction response regulator, C-terminal effector Y89_1312 IPR036388 Y89_1312 Y89_1313 IPR036188 Y89_1313 Y89_1314 IPR007486 Protein of unknown function DUF533 Y89_1314 IPR029024 TerB-like Y89_1315 IPR000847 Transcription regulator HTH, LysR Y89_1315 IPR005119 LysR, substrate-binding Y89_1315 IPR036388 Y89_1315 Y89_1315 IPR036390 Y89_1315 Y89_1316 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Y89_1316 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Y89_1316 IPR012132 Glucose-methanol-choline oxidoreductase Y89_1316 IPR036188 Y89_1316 Y89_1317 IPR005828 General substrate transporter Y89_1317 IPR005829 Sugar transporter, conserved site Y89_1317 IPR036259 Y89_1317 Y89_1318 IPR003660 HAMP linker domain Y89_1318 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_1318 IPR004090 Chemotaxis methyl-accepting receptor Y89_1318 IPR024478 4HB MCP domain Y89_1319 IPR002545 CheW-like protein Y89_1319 IPR036061 Y89_1319 Y89_1320 IPR000780 MCP methyltransferase, CheR-type Y89_1320 IPR011990 Tetratricopeptide-like helical domain Y89_1320 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Y89_1320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1321 IPR002545 CheW-like protein Y89_1321 IPR036061 Y89_1321 Y89_1322 IPR001789 Signal transduction response regulator, receiver domain Y89_1322 IPR002545 CheW-like protein Y89_1322 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1322 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_1322 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_1322 IPR011006 CheY-like superfamily Y89_1322 IPR036061 Y89_1322 Y89_1322 IPR036641 Y89_1322 Y89_1322 IPR036890 Y89_1322 Y89_1323 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Y89_1323 IPR001789 Signal transduction response regulator, receiver domain Y89_1323 IPR008248 Signal transduction response regulator, chemotaxis, CheB Y89_1323 IPR011006 CheY-like superfamily Y89_1323 IPR035909 Y89_1323 Y89_1324 IPR000160 GGDEF domain Y89_1324 IPR001789 Signal transduction response regulator, receiver domain Y89_1324 IPR011006 CheY-like superfamily Y89_1324 IPR029787 Nucleotide cyclase Y89_1325 IPR000352 Peptide chain release factor class I/class II Y89_1325 IPR004374 Peptide chain release factor 2 Y89_1325 IPR005139 Peptide chain release factor Y89_1326 IPR002313 Lysine-tRNA ligase, class II Y89_1326 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Y89_1326 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Y89_1326 IPR012340 Nucleic acid-binding, OB-fold Y89_1326 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal Y89_1327 IPR001647 DNA-binding HTH domain, TetR-type Y89_1327 IPR009057 Homeodomain-like Y89_1329 IPR012548 Protein of unknown function DUF1704 Y89_1329 IPR012656 Conserved hypothetical protein CHP02421, QEGLA Y89_1330 IPR002838 Mitochondrial biogenesis protein AIM24 Y89_1330 IPR016031 Tryptophan RNA-binding attenuator protein-like domain Y89_1330 IPR036983 Y89_1330 Y89_1331 IPR000073 Alpha/beta hydrolase fold-1 Y89_1331 IPR002410 Peptidase S33 Y89_1331 IPR022742 Putative lysophospholipase Y89_1331 IPR029058 Alpha/Beta hydrolase fold Y89_1333 IPR002589 Macro domain Y89_1334 IPR006664 Outer membrane protein, bacterial Y89_1334 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_1334 IPR006690 Outer membrane protein, OmpA-like, conserved site Y89_1334 IPR025511 Domain of unknown function DUF4398 Y89_1334 IPR036737 Y89_1334 Y89_1335 IPR025511 Domain of unknown function DUF4398 Y89_1336 IPR001757 Cation-transporting P-type ATPase Y89_1336 IPR008250 P-type ATPase, A domain Y89_1336 IPR018303 P-type ATPase, phosphorylation site Y89_1336 IPR023214 HAD-like domain Y89_1336 IPR023298 P-type ATPase, transmembrane domain Y89_1336 IPR023299 P-type ATPase, cytoplasmic domain N Y89_1336 IPR027256 Cation-transporting P-type ATPase, subfamily IB Y89_1336 IPR036163 Y89_1336 Y89_1336 IPR036412 Y89_1336 Y89_1337 IPR000551 MerR-type HTH domain Y89_1337 IPR009061 DNA binding domain, putative Y89_1337 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator Y89_1339 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_1339 IPR018129 Phosphoenolpyruvate carboxylase, active site Y89_1339 IPR021135 Phosphoenolpyruvate carboxylase Y89_1339 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type Y89_1339 IPR033129 Y89_1339 Y89_1340 IPR000850 Adenylate kinase/UMP-CMP kinase Y89_1340 IPR006259 Adenylate kinase subfamily Y89_1340 IPR007862 Adenylate kinase, active site lid domain Y89_1340 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1340 IPR033690 Y89_1340 Y89_1341 IPR000905 Gcp-like domain Y89_1341 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ Y89_1343 IPR002763 Protein of unknown function DUF72 Y89_1343 IPR036520 Y89_1343 Y89_1344 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_1345 IPR009683 Extensin-like, C-terminal Y89_1346 IPR007536 Ribosomal RNA small subunit methyltransferase J Y89_1346 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1347 IPR001128 Cytochrome P450 Y89_1347 IPR002401 Cytochrome P450, E-class, group I Y89_1347 IPR017972 Cytochrome P450, conserved site Y89_1347 IPR036396 Y89_1347 Y89_1348 IPR001647 DNA-binding HTH domain, TetR-type Y89_1348 IPR009057 Homeodomain-like Y89_1348 IPR036271 Y89_1348 Y89_1348 IPR039536 Y89_1348 Y89_1349 IPR006143 RND efflux pump, membrane fusion protein Y89_1349 IPR032317 Y89_1349 Y89_1350 IPR001036 Acriflavin resistance protein Y89_1350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_1351 IPR025245 Protein of unknown function DUF4197 Y89_1352 IPR039366 Y89_1352 Y89_1353 IPR002123 Phospholipid/glycerol acyltransferase Y89_1353 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase Y89_1353 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB Y89_1354 IPR003439 ABC transporter-like Y89_1354 IPR003593 AAA+ ATPase domain Y89_1354 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1355 IPR032688 Y89_1355 Y89_1356 IPR019196 ABC-type uncharacterised transport system Y89_1357 IPR025641 Domain of unknown function DUF4340 Y89_1358 IPR003808 Fe-S metabolism associated domain, SufE-like Y89_1359 IPR000192 Aminotransferase class V domain Y89_1359 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1359 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1359 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1359 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site Y89_1360 IPR001451 Bacterial transferase hexapeptide repeat Y89_1360 IPR011004 Trimeric LpxA-like Y89_1360 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria Y89_1360 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family Y89_1360 IPR032784 Y89_1360 Y89_1360 IPR038361 Y89_1360 Y89_1361 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_1362 IPR006504 Transcriptional regulator Spx/MgsR Y89_1362 IPR006660 Arsenate reductase-like Y89_1362 IPR036249 Y89_1362 Y89_1363 IPR005358 Putative zinc- or iron-chelating domain containing protein Y89_1363 IPR016928 Uncharacterised conserved protein UCP029611 Y89_1366 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria Y89_1366 IPR006153 Cation/H+ exchanger Y89_1366 IPR038770 Y89_1366 Y89_1367 IPR004839 Aminotransferase, class I/classII Y89_1367 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1367 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1367 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1367 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria Y89_1368 IPR002912 ACT domain Y89_1368 IPR002934 Nucleotidyl transferase domain Y89_1368 IPR003607 HD/PDEase domain Y89_1368 IPR006674 HD domain Y89_1368 IPR010043 Protein-PII uridylyltransferase Y89_1368 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase Y89_1369 IPR000994 Peptidase M24, structural domain Y89_1369 IPR001714 Peptidase M24, methionine aminopeptidase Y89_1369 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 Y89_1369 IPR036005 Y89_1369 Y89_1370 IPR001865 Ribosomal protein S2 Y89_1370 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid Y89_1370 IPR018130 Ribosomal protein S2, conserved site Y89_1370 IPR023591 Ribosomal protein S2, flavodoxin-like domain Y89_1371 IPR001816 Translation elongation factor EFTs/EF1B Y89_1371 IPR009060 UBA-like Y89_1371 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation Y89_1371 IPR018101 Translation elongation factor Ts, conserved site Y89_1371 IPR036402 Y89_1371 Y89_1372 IPR001048 Aspartate/glutamate/uridylate kinase Y89_1372 IPR011817 Uridylate kinase Y89_1372 IPR015963 Uridylate kinase, bacteria Y89_1372 IPR036393 Y89_1372 Y89_1373 IPR002661 Ribosome recycling factor Y89_1373 IPR023584 Ribosome recycling factor domain Y89_1373 IPR036191 Y89_1373 Y89_1374 IPR001441 Decaprenyl diphosphate synthase-like Y89_1374 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site Y89_1374 IPR036424 Y89_1374 Y89_1375 IPR000374 Phosphatidate cytidylyltransferase Y89_1376 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase Y89_1376 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal Y89_1376 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal Y89_1376 IPR026877 DXP reductoisomerase C-terminal domain Y89_1376 IPR036169 Y89_1376 Y89_1376 IPR036291 Y89_1376 Y89_1377 IPR001478 PDZ domain Y89_1377 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase Y89_1377 IPR008915 Peptidase M50 Y89_1377 IPR036034 Y89_1377 Y89_1378 IPR000184 Bacterial surface antigen (D15) Y89_1378 IPR010827 Surface antigen variable number Y89_1378 IPR023707 Outer membrane protein assembly factor BamA Y89_1379 IPR005632 Chaperone protein Skp Y89_1379 IPR024930 Skp domain Y89_1380 IPR001451 Bacterial transferase hexapeptide repeat Y89_1380 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase Y89_1380 IPR011004 Trimeric LpxA-like Y89_1380 IPR018357 Hexapeptide transferase, conserved site Y89_1380 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region Y89_1381 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Y89_1381 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Y89_1381 IPR029069 HotDog domain Y89_1382 IPR001451 Bacterial transferase hexapeptide repeat Y89_1382 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Y89_1382 IPR011004 Trimeric LpxA-like Y89_1382 IPR018357 Hexapeptide transferase, conserved site Y89_1382 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal Y89_1382 IPR037157 Y89_1382 Y89_1383 IPR003835 Glycosyl transferase, family 19 Y89_1384 IPR012337 Ribonuclease H-like domain Y89_1384 IPR022898 Ribonuclease HII Y89_1384 IPR024567 Ribonuclease HII/HIII domain Y89_1384 IPR036397 Y89_1384 Y89_1385 IPR001463 Sodium:alanine symporter Y89_1386 IPR003141 Polymerase/histidinol phosphatase, N-terminal Y89_1386 IPR004013 PHP, C-terminal Y89_1386 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Y89_1386 IPR004805 DNA polymerase III, alpha subunit Y89_1386 IPR011708 Bacterial DNA polymerase III, alpha subunit Y89_1386 IPR016195 Polymerase/histidinol phosphatase-like Y89_1386 IPR029460 DNA polymerase, helix-hairpin-helix motif Y89_1387 IPR001095 Acetyl-CoA carboxylase, alpha subunit Y89_1387 IPR029045 ClpP/crotonase-like domain Y89_1388 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase Y89_1388 IPR012094 Lysidine-tRNA(Ile) synthetase Y89_1388 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal Y89_1388 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal Y89_1388 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_1388 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain Y89_1389 IPR004468 CTP synthase Y89_1389 IPR017456 CTP synthase, N-terminal Y89_1389 IPR017926 Glutamine amidotransferase Y89_1389 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1389 IPR029062 Class I glutamine amidotransferase-like Y89_1390 IPR006218 DAHP synthetase I/KDSA Y89_1390 IPR006269 3-deoxy-8-phosphooctulonate synthase Y89_1390 IPR013785 Aldolase-type TIM barrel Y89_1391 IPR000941 Enolase Y89_1391 IPR020809 Enolase, conserved site Y89_1391 IPR020810 Enolase, C-terminal Y89_1391 IPR020811 Enolase, N-terminal Y89_1391 IPR029017 Enolase N-terminal domain-like Y89_1391 IPR036849 Y89_1391 Y89_1392 IPR007060 Septum formation initiator FtsL/DivIC Y89_1392 IPR023081 Cell division protein FtsB Y89_1393 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Y89_1393 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site Y89_1393 IPR029044 Nucleotide-diphospho-sugar transferases Y89_1393 IPR034683 Y89_1393 Y89_1394 IPR001455 TusA-like domain Y89_1394 IPR036868 Y89_1394 Y89_1395 IPR007272 Sulphur transport domain Y89_1396 IPR000847 Transcription regulator HTH, LysR Y89_1396 IPR005119 LysR, substrate-binding Y89_1396 IPR036388 Y89_1396 Y89_1396 IPR036390 Y89_1396 Y89_1397 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Y89_1397 IPR011032 GroES (chaperonin 10)-like Y89_1397 IPR013149 Alcohol dehydrogenase, C-terminal Y89_1397 IPR013154 Alcohol dehydrogenase GroES-like Y89_1397 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase Y89_1397 IPR020843 Polyketide synthase, enoylreductase Y89_1397 IPR036291 Y89_1397 Y89_1398 IPR000801 Putative esterase Y89_1398 IPR014186 S-formylglutathione hydrolase Y89_1398 IPR029058 Alpha/Beta hydrolase fold Y89_1399 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Y89_1399 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site Y89_1399 IPR036571 Y89_1399 Y89_1400 IPR001656 Pseudouridine synthase, TruD Y89_1400 IPR020103 Pseudouridine synthase, catalytic domain Y89_1400 IPR020119 Pseudouridine synthase TruD, conserved site Y89_1401 IPR002828 Survival protein SurE-like phosphatase/nucleotidase Y89_1401 IPR030048 Y89_1401 Y89_1401 IPR036523 Y89_1401 Y89_1402 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase Y89_1402 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1403 IPR011055 Duplicated hybrid motif Y89_1403 IPR016047 Peptidase M23 Y89_1403 IPR018392 LysM domain Y89_1403 IPR036779 Y89_1403 Y89_1404 IPR000943 RNA polymerase sigma-70 Y89_1404 IPR007624 RNA polymerase sigma-70 region 3 Y89_1404 IPR007627 RNA polymerase sigma-70 region 2 Y89_1404 IPR007630 RNA polymerase sigma-70 region 4 Y89_1404 IPR009042 RNA polymerase sigma-70 region 1.2 Y89_1404 IPR012761 RNA polymerase sigma factor RpoS Y89_1404 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_1404 IPR013325 RNA polymerase sigma factor, region 2 Y89_1404 IPR014284 RNA polymerase sigma-70 like domain Y89_1404 IPR036388 Y89_1404 Y89_1405 IPR000813 7Fe ferredoxin Y89_1405 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_1405 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_1405 IPR022569 Ferredoxin, C-terminal Y89_1406 IPR000432 DNA mismatch repair protein MutS, C-terminal Y89_1406 IPR005748 DNA mismatch repair protein MutS, type 1 Y89_1406 IPR007695 DNA mismatch repair protein MutS-like, N-terminal Y89_1406 IPR007696 DNA mismatch repair protein MutS, core Y89_1406 IPR007860 DNA mismatch repair protein MutS, connector domain Y89_1406 IPR007861 DNA mismatch repair protein MutS, clamp Y89_1406 IPR016151 DNA mismatch repair protein MutS, N-terminal Y89_1406 IPR017261 DNA mismatch repair protein Msh6 Y89_1406 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1406 IPR036187 Y89_1406 Y89_1406 IPR036678 Y89_1406 Y89_1408 IPR008136 CinA, C-terminal Y89_1408 IPR036653 Y89_1408 Y89_1409 IPR003593 AAA+ ATPase domain Y89_1409 IPR013765 DNA recombination and repair protein RecA Y89_1409 IPR020584 DNA recombination/repair protein RecA, conserved site Y89_1409 IPR023400 DNA recombination and repair protein RecA, C-terminal Y89_1409 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1410 IPR003783 Regulatory protein RecX Y89_1410 IPR036388 Y89_1410 Y89_1411 IPR031100 Y89_1411 Y89_1412 IPR001279 Beta-lactamase-like Y89_1412 IPR011108 RNA-metabolising metallo-beta-lactamase Y89_1412 IPR022712 Beta-Casp domain Y89_1412 IPR036866 Y89_1412 Y89_1413 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase Y89_1413 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Y89_1413 IPR029061 Thiamin diphosphate-binding fold Y89_1414 IPR024530 Protein of unknown function DUF3820 Y89_1415 IPR025203 Protein of unknown function DUF4146 Y89_1416 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Y89_1416 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_1417 IPR000515 MetI-like domain Y89_1417 IPR035906 Y89_1417 Y89_1418 IPR000515 MetI-like domain Y89_1418 IPR035906 Y89_1418 Y89_1419 IPR003439 ABC transporter-like Y89_1419 IPR003593 AAA+ ATPase domain Y89_1419 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit Y89_1419 IPR008995 Molybdate/tungstate binding, C-terminal Y89_1419 IPR013611 Transport-associated OB, type 2 Y89_1419 IPR017871 ABC transporter, conserved site Y89_1419 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1420 IPR005636 DTW Y89_1421 IPR000620 Drug/metabolite transporter Y89_1422 IPR000792 Transcription regulator LuxR, C-terminal Y89_1422 IPR001789 Signal transduction response regulator, receiver domain Y89_1422 IPR011006 CheY-like superfamily Y89_1423 IPR000829 Diacylglycerol kinase, prokaryotic Y89_1423 IPR036945 Y89_1423 Y89_1424 IPR002932 Glutamate synthase domain Y89_1424 IPR013785 Aldolase-type TIM barrel Y89_1424 IPR024188 Glutamate synthase large subunit-like protein Y89_1424 IPR027283 Glutamate synthase large subunit-like protein, bacteria Y89_1425 IPR002150 Ribosomal protein L31 Y89_1425 IPR027493 Ribosomal protein L31 type B Y89_1425 IPR034704 Y89_1425 Y89_1426 IPR000473 Ribosomal protein L36 Y89_1426 IPR035977 Y89_1426 Y89_1427 IPR000792 Transcription regulator LuxR, C-terminal Y89_1427 IPR016032 Signal transduction response regulator, C-terminal effector Y89_1427 IPR036388 Y89_1427 Y89_1428 IPR003010 Carbon-nitrogen hydrolase Y89_1428 IPR036526 Y89_1428 Y89_1429 IPR002293 Amino acid/polyamine transporter I Y89_1429 IPR004841 Amino acid permease/ SLC12A domain Y89_1430 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site Y89_1430 IPR004026 Ada DNA repair, metal-binding Y89_1430 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding Y89_1430 IPR016221 Bifunctional regulatory protein Ada Y89_1430 IPR018060 DNA binding HTH domain, AraC-type Y89_1430 IPR035451 Y89_1430 Y89_1430 IPR036217 Y89_1430 Y89_1430 IPR036388 Y89_1430 Y89_1430 IPR036631 Y89_1430 Y89_1431 IPR005828 General substrate transporter Y89_1431 IPR036259 Y89_1431 Y89_1432 IPR000847 Transcription regulator HTH, LysR Y89_1432 IPR005119 LysR, substrate-binding Y89_1432 IPR036388 Y89_1432 Y89_1432 IPR036390 Y89_1432 Y89_1433 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_1433 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_1433 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_1433 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_1433 IPR036250 Y89_1433 Y89_1434 IPR003673 CoA-transferase family III Y89_1434 IPR023606 CoA-transferase family III domain Y89_1435 IPR001753 Crotonase superfamily Y89_1435 IPR014748 Crontonase, C-terminal Y89_1435 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Y89_1435 IPR029045 ClpP/crotonase-like domain Y89_1436 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Y89_1436 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Y89_1436 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_1436 IPR036291 Y89_1436 Y89_1437 IPR002155 Thiolase Y89_1437 IPR016039 Thiolase-like Y89_1437 IPR020610 Thiolase, active site Y89_1437 IPR020613 Thiolase, conserved site Y89_1437 IPR020615 Thiolase, acyl-enzyme intermediate active site Y89_1437 IPR020616 Thiolase, N-terminal Y89_1437 IPR020617 Thiolase, C-terminal Y89_1438 IPR005318 Outer membrane porin, bacterial Y89_1438 IPR023614 Porin domain Y89_1439 IPR000847 Transcription regulator HTH, LysR Y89_1439 IPR005119 LysR, substrate-binding Y89_1439 IPR036388 Y89_1439 Y89_1439 IPR036390 Y89_1439 Y89_1440 IPR000073 Alpha/beta hydrolase fold-1 Y89_1440 IPR029058 Alpha/Beta hydrolase fold Y89_1441 IPR009707 GlpM Y89_1442 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase Y89_1442 IPR006076 FAD dependent oxidoreductase Y89_1442 IPR031656 Y89_1442 Y89_1442 IPR036188 Y89_1442 Y89_1442 IPR038299 Y89_1442 Y89_1443 IPR001034 HTH DeoR N-terminal domain Y89_1443 IPR014036 DeoR C-terminal sensor domain Y89_1443 IPR018356 Transcription regulator, HTH DeoR-type, conserved site Y89_1443 IPR036388 Y89_1443 Y89_1443 IPR036390 Y89_1443 Y89_1443 IPR037171 Y89_1443 Y89_1444 IPR000577 Y89_1444 Y89_1444 IPR005999 Glycerol kinase Y89_1444 IPR018483 Carbohydrate kinase, FGGY, conserved site Y89_1444 IPR018484 Carbohydrate kinase, FGGY, N-terminal Y89_1444 IPR018485 Carbohydrate kinase, FGGY, C-terminal Y89_1445 IPR000425 Major intrinsic protein Y89_1445 IPR022357 Major intrinsic protein, conserved site Y89_1445 IPR023271 Aquaporin-like Y89_1446 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Y89_1446 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Y89_1446 IPR036754 Y89_1446 Y89_1447 IPR000577 Y89_1447 Y89_1447 IPR005999 Glycerol kinase Y89_1447 IPR018483 Carbohydrate kinase, FGGY, conserved site Y89_1447 IPR018484 Carbohydrate kinase, FGGY, N-terminal Y89_1447 IPR018485 Carbohydrate kinase, FGGY, C-terminal Y89_1448 IPR003719 Phenazine biosynthesis PhzF protein Y89_1450 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Y89_1450 IPR016174 Di-haem cytochrome, transmembrane Y89_1451 IPR006121 Heavy metal-associated domain, HMA Y89_1451 IPR017969 Heavy-metal-associated, conserved site Y89_1451 IPR036163 Y89_1451 Y89_1452 IPR001647 DNA-binding HTH domain, TetR-type Y89_1452 IPR009057 Homeodomain-like Y89_1452 IPR013572 Transcription regulator MAATS, C-terminal Y89_1452 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y89_1452 IPR036271 Y89_1452 Y89_1453 IPR004812 Drug resistance transporter Bcr/CmlA subfamily Y89_1453 IPR011701 Major facilitator superfamily Y89_1453 IPR036259 Y89_1453 Y89_1455 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_1455 IPR009057 Homeodomain-like Y89_1455 IPR018060 DNA binding HTH domain, AraC-type Y89_1455 IPR018062 HTH domain AraC-type, conserved site Y89_1455 IPR020449 Transcription regulator HTH, AraC- type Y89_1455 IPR037923 Y89_1455 Y89_1456 IPR010061 Methylmalonate-semialdehyde dehydrogenase Y89_1456 IPR015590 Aldehyde dehydrogenase domain Y89_1456 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_1456 IPR016161 Aldehyde/histidinol dehydrogenase Y89_1456 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_1456 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_1457 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Y89_1457 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Y89_1457 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_1457 IPR011548 3-hydroxyisobutyrate dehydrogenase Y89_1457 IPR013328 Dehydrogenase, multihelical Y89_1457 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type Y89_1457 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Y89_1457 IPR036291 Y89_1457 Y89_1458 IPR000873 AMP-dependent synthetase/ligase Y89_1458 IPR020845 AMP-binding, conserved site Y89_1458 IPR025110 AMP-binding enzyme C-terminal domain Y89_1458 IPR032387 Y89_1458 Y89_1459 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site Y89_1459 IPR011032 GroES (chaperonin 10)-like Y89_1459 IPR013154 Alcohol dehydrogenase GroES-like Y89_1459 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 Y89_1459 IPR020843 Polyketide synthase, enoylreductase Y89_1459 IPR036291 Y89_1459 Y89_1460 IPR007138 Antibiotic biosynthesis monooxygenase-like domain Y89_1460 IPR011008 Dimeric alpha-beta barrel Y89_1461 IPR000847 Transcription regulator HTH, LysR Y89_1461 IPR005119 LysR, substrate-binding Y89_1461 IPR036388 Y89_1461 Y89_1461 IPR036390 Y89_1461 Y89_1462 IPR000468 Barstar (barnase inhibitor) Y89_1462 IPR035905 Y89_1462 Y89_1463 IPR001130 TatD family Y89_1463 IPR018228 Deoxyribonuclease, TatD-related, conserved site Y89_1463 IPR032466 Y89_1463 Y89_1464 IPR000843 Transcription regulator HTH, LacI Y89_1464 IPR001761 Periplasmic binding protein/LacI sugar binding domain Y89_1464 IPR010982 Lambda repressor-like, DNA-binding domain Y89_1464 IPR012781 D-fructose-responsive transcription factor Y89_1464 IPR028082 Periplasmic binding protein-like I Y89_1465 IPR000032 Phosphocarrier HPr protein-like Y89_1465 IPR000121 PEP-utilising enzyme, C-terminal Y89_1465 IPR002178 PTS EIIA type-2 domain Y89_1465 IPR006318 Phosphoenolpyruvate-utilising enzyme Y89_1465 IPR008279 PEP-utilising enzyme, mobile domain Y89_1465 IPR008731 Phosphotransferase system, enzyme I N-terminal Y89_1465 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_1465 IPR016152 Phosphotransferase/anion transporter Y89_1465 IPR018274 PEP-utilising enzyme, active site Y89_1465 IPR023151 PEP-utilising enzyme, conserved site Y89_1465 IPR035895 Y89_1465 Y89_1465 IPR036618 Y89_1465 Y89_1465 IPR036637 Y89_1465 Y89_1466 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Y89_1466 IPR011611 Carbohydrate kinase PfkB Y89_1466 IPR017583 Tagatose/fructose phosphokinase Y89_1466 IPR022463 Fructose 1-phosphate kinase Y89_1466 IPR029056 Ribokinase-like Y89_1467 IPR003352 Phosphotransferase system, EIIC Y89_1467 IPR003353 Phosphotransferase system, fructose-specific IIB subunit Y89_1467 IPR003501 Phosphotransferase system, EIIB component, type 2/3 Y89_1467 IPR006327 Phosphotransferase system, fructose IIC component Y89_1467 IPR036095 Y89_1467 Y89_1468 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Y89_1468 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_1468 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Y89_1468 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Y89_1468 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Y89_1468 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type Y89_1468 IPR036220 Y89_1468 Y89_1468 IPR036291 Y89_1468 Y89_1469 IPR000390 Small multidrug resistance protein family Y89_1469 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF Y89_1470 IPR000620 Drug/metabolite transporter Y89_1470 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE Y89_1471 IPR003342 Glycosyl transferase, family 39 Y89_1471 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase Y89_1472 IPR002509 Polysaccharide deacetylase Y89_1472 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Y89_1472 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable Y89_1473 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Y89_1473 IPR002376 Formyl transferase, N-terminal Y89_1473 IPR005793 Formyl transferase, C-terminal Y89_1473 IPR011034 Formyl transferase, C-terminal-like Y89_1473 IPR021168 Bifunctional polymyxin resistance protein, ArnA Y89_1473 IPR036291 Y89_1473 Y89_1473 IPR036477 Y89_1473 Y89_1474 IPR001173 Glycosyltransferase 2-like Y89_1474 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase Y89_1474 IPR029044 Nucleotide-diphospho-sugar transferases Y89_1475 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Y89_1475 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1475 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1475 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1475 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB Y89_1476 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal Y89_1476 IPR005835 Nucleotidyl transferase Y89_1476 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Y89_1476 IPR011051 RmlC-like cupin domain Y89_1476 IPR014710 RmlC-like jelly roll fold Y89_1476 IPR029044 Nucleotide-diphospho-sugar transferases Y89_1477 IPR035422 Y89_1477 Y89_1478 IPR031811 Y89_1478 Y89_1479 IPR004299 Membrane bound O-acyl transferase, MBOAT Y89_1479 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB Y89_1479 IPR028362 Alginate O-acetyltransferase AlgI Y89_1480 IPR008397 Alginate lyase domain Y89_1480 IPR008929 Chondroitin AC/alginate lyase Y89_1480 IPR022859 Alginate lyase Y89_1481 IPR031798 Y89_1481 Y89_1481 IPR031811 Y89_1481 Y89_1481 IPR038639 Y89_1481 Y89_1482 IPR006626 Parallel beta-helix repeat Y89_1482 IPR006633 Carbohydrate-binding/sugar hydrolysis domain Y89_1482 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Y89_1482 IPR011050 Pectin lyase fold/virulence factor Y89_1482 IPR012334 Pectin lyase fold Y89_1482 IPR022441 Parallel beta-helix repeat-2 Y89_1483 IPR025388 Alginate export domain Y89_1484 IPR006597 Sel1-like Y89_1484 IPR011990 Tetratricopeptide-like helical domain Y89_1485 IPR009875 PilZ domain Y89_1486 IPR029044 Nucleotide-diphospho-sugar transferases Y89_1487 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Y89_1487 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_1487 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Y89_1487 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Y89_1487 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Y89_1487 IPR028358 GDP-mannose 6-dehydrogenase Y89_1487 IPR036220 Y89_1487 Y89_1487 IPR036291 Y89_1487 Y89_1488 IPR005583 Uncharacterised protein family UPF0246 Y89_1489 IPR003439 ABC transporter-like Y89_1489 IPR003593 AAA+ ATPase domain Y89_1489 IPR008995 Molybdate/tungstate binding, C-terminal Y89_1489 IPR013611 Transport-associated OB, type 2 Y89_1489 IPR017871 ABC transporter, conserved site Y89_1489 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1490 IPR002292 Ornithine/putrescine carbamoyltransferase Y89_1490 IPR006130 Aspartate/ornithine carbamoyltransferase Y89_1490 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Y89_1490 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Y89_1490 IPR024904 Ornithine carbamoyltransferase Y89_1490 IPR036901 Y89_1490 Y89_1492 IPR000209 Peptidase S8/S53 domain Y89_1492 IPR005546 Autotransporter beta-domain Y89_1492 IPR006315 Outer membrane autotransporter barrel Y89_1492 IPR013425 Autotransporter-associated beta strand repeat Y89_1492 IPR015500 Peptidase S8, subtilisin-related Y89_1492 IPR022398 Peptidase S8, subtilisin, His-active site Y89_1492 IPR023828 Peptidase S8, subtilisin, Ser-active site Y89_1492 IPR036709 Y89_1492 Y89_1492 IPR036852 Y89_1492 Y89_1493 IPR006656 Molybdopterin oxidoreductase Y89_1493 IPR006657 Molydopterin dinucleotide-binding domain Y89_1493 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Y89_1494 IPR002109 Glutaredoxin Y89_1494 IPR004480 Monothiol glutaredoxin-related Y89_1494 IPR014434 Monothiol glutaredoxin Y89_1494 IPR036249 Y89_1494 Y89_1495 IPR011701 Major facilitator superfamily Y89_1495 IPR036259 Y89_1495 Y89_1496 IPR002024 Bacterioferritin Y89_1496 IPR008331 Ferritin/DPS protein domain Y89_1496 IPR009078 Ferritin-like superfamily Y89_1496 IPR012347 Ferritin-related Y89_1497 IPR007419 BFD-like [2Fe-2S]-binding domain Y89_1498 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Y89_1498 IPR019479 Peroxiredoxin, C-terminal Y89_1498 IPR024706 Peroxiredoxin, AhpC-type Y89_1498 IPR036249 Y89_1498 Y89_1499 IPR005987 Ribonuclease T Y89_1499 IPR012337 Ribonuclease H-like domain Y89_1499 IPR013520 Exonuclease, RNase T/DNA polymerase III Y89_1499 IPR036397 Y89_1499 Y89_1500 IPR002195 Dihydroorotase, conserved site Y89_1500 IPR004721 Dihydroorotase homodimeric type Y89_1500 IPR006680 Amidohydrolase 1 Y89_1500 IPR032466 Y89_1500 Y89_1501 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_1501 IPR036737 Y89_1501 Y89_1502 IPR001518 Argininosuccinate synthase Y89_1502 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_1502 IPR018223 Argininosuccinate synthase, conserved site Y89_1502 IPR023434 Argininosuccinate synthase, type 1 subfamily Y89_1502 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body Y89_1504 IPR006143 RND efflux pump, membrane fusion protein Y89_1504 IPR032317 Y89_1504 Y89_1505 IPR001036 Acriflavin resistance protein Y89_1505 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Y89_1505 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_1506 IPR003423 Outer membrane efflux protein Y89_1506 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_1507 IPR006121 Heavy metal-associated domain, HMA Y89_1507 IPR036163 Y89_1507 Y89_1508 IPR016084 Haem oxygenase-like, multi-helical Y89_1508 IPR029474 Haem-oxygenase-associated, N-terminal helices Y89_1508 IPR037061 Y89_1508 Y89_1509 IPR016084 Haem oxygenase-like, multi-helical Y89_1509 IPR029474 Haem-oxygenase-associated, N-terminal helices Y89_1509 IPR037061 Y89_1509 Y89_1510 IPR000362 Fumarate lyase family Y89_1510 IPR004769 Adenylosuccinate lyase Y89_1510 IPR008948 L-Aspartase-like Y89_1510 IPR019468 Adenylosuccinate lyase C-terminal Y89_1510 IPR020557 Fumarate lyase, conserved site Y89_1510 IPR022761 Fumarate lyase, N-terminal Y89_1511 IPR000362 Fumarate lyase family Y89_1511 IPR008948 L-Aspartase-like Y89_1511 IPR019468 Adenylosuccinate lyase C-terminal Y89_1511 IPR020557 Fumarate lyase, conserved site Y89_1511 IPR022761 Fumarate lyase, N-terminal Y89_1512 IPR025714 Methyltransferase domain Y89_1512 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1512 IPR036388 Y89_1512 Y89_1512 IPR036390 Y89_1512 Y89_1514 IPR000445 Helix-hairpin-helix motif Y89_1514 IPR003265 HhH-GPD domain Y89_1514 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif Y89_1514 IPR005759 Endonuclease III Y89_1514 IPR011257 DNA glycosylase Y89_1514 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Y89_1515 IPR003667 Electron transport complex, Rnf/Nqr Y89_1515 IPR010968 Electron transport complex, RnfE Y89_1516 IPR007329 FMN-binding Y89_1516 IPR010209 Electron transport complex, RnfG Y89_1517 IPR004338 NADH-quinone reductase NQR2/RnfD Y89_1517 IPR011303 Electron transport complex, RnfD Y89_1518 IPR009051 Alpha-helical ferredoxin Y89_1518 IPR010208 Electron transport complex protein RnfC Y89_1518 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit Y89_1518 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_1518 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_1518 IPR019554 Soluble ligand binding domain Y89_1518 IPR026902 RnfC Barrel sandwich hybrid domain Y89_1518 IPR037225 Y89_1518 Y89_1519 IPR007202 4Fe-4S domain Y89_1519 IPR010207 Electron transport complex, RnfB Y89_1519 IPR011005 Dihydropteroate synthase-like Y89_1519 IPR016463 Electron transport complex, RnfB, Proteobacteria Y89_1519 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_1520 IPR003667 Electron transport complex, Rnf/Nqr Y89_1520 IPR011293 Electron transport complex, RnfA Y89_1523 IPR025645 Domain of unknown function DUF4349 Y89_1524 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Y89_1524 IPR002547 tRNA-binding domain Y89_1524 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal Y89_1524 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Y89_1524 IPR012340 Nucleic acid-binding, OB-fold Y89_1524 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_1524 IPR014758 Methionyl-tRNA synthetase Y89_1524 IPR015413 Methionyl/Leucyl tRNA synthetase Y89_1524 IPR023458 Methionine-tRNA ligase, type 1 Y89_1524 IPR029038 Methionyl-tRNA synthetase, Zn-domain Y89_1524 IPR033911 Y89_1524 Y89_1525 IPR000808 Mrp, conserved site Y89_1525 IPR002744 Domain of unknown function DUF59 Y89_1525 IPR019591 Mrp/NBP35 ATP-binding protein Y89_1525 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1525 IPR033756 Y89_1525 Y89_1525 IPR034904 Y89_1525 Y89_1526 IPR011962 Deoxycytidine triphosphate deaminase Y89_1526 IPR029054 dUTPase-like Y89_1526 IPR036157 Y89_1526 Y89_1527 IPR000073 Alpha/beta hydrolase fold-1 Y89_1527 IPR029058 Alpha/Beta hydrolase fold Y89_1528 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase Y89_1528 IPR004276 Glycosyl transferase, family 28 Y89_1529 IPR000792 Transcription regulator LuxR, C-terminal Y89_1529 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Y89_1529 IPR016032 Signal transduction response regulator, C-terminal effector Y89_1529 IPR036388 Y89_1529 Y89_1529 IPR036693 Y89_1529 Y89_1530 IPR001690 Autoinducer synthesis protein Y89_1530 IPR016181 Acyl-CoA N-acyltransferase Y89_1530 IPR018311 Autoinducer synthesis, conserved site Y89_1531 IPR001638 Extracellular solute-binding protein, family 3 Y89_1531 IPR018313 Extracellular solute-binding protein, family 3, conserved site Y89_1532 IPR000620 Drug/metabolite transporter Y89_1532 IPR004779 Carboxylate/Amino Acid/Amine Transporter Y89_1533 IPR004626 RarD protein Y89_1534 IPR000064 Endopeptidase, NLPC/P60 domain Y89_1534 IPR038765 Y89_1534 Y89_1535 IPR001891 Malic oxidoreductase Y89_1535 IPR012301 Malic enzyme, N-terminal domain Y89_1535 IPR012302 Malic enzyme, NAD-binding Y89_1535 IPR015884 Malic enzyme, conserved site Y89_1535 IPR023667 NAD-dependent malic enzyme, proteobacteria Y89_1535 IPR036291 Y89_1535 Y89_1535 IPR037062 Y89_1535 Y89_1536 IPR000086 NUDIX hydrolase domain Y89_1536 IPR015797 NUDIX hydrolase domain-like Y89_1536 IPR020084 NUDIX hydrolase, conserved site Y89_1537 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal Y89_1537 IPR024072 Dihydrofolate reductase-like domain Y89_1538 IPR006685 Mechanosensitive ion channel MscS Y89_1538 IPR010920 Like-Sm (LSM) domain Y89_1539 IPR005828 General substrate transporter Y89_1539 IPR005829 Sugar transporter, conserved site Y89_1539 IPR036259 Y89_1539 Y89_1540 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site Y89_1540 IPR001650 Helicase, C-terminal Y89_1540 IPR011545 DEAD/DEAH box helicase domain Y89_1540 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_1540 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1541 IPR010290 Transmembrane secretion effector Y89_1541 IPR036259 Y89_1541 Y89_1542 IPR008947 Phospholipase C/P1 nuclease domain Y89_1543 IPR010648 Uncharacterised protein family UPF0270 Y89_1543 IPR036685 Y89_1543 Y89_1544 IPR001789 Signal transduction response regulator, receiver domain Y89_1544 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1544 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_1544 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_1544 IPR011006 CheY-like superfamily Y89_1544 IPR011622 7TM-DISM receptor, extracellular domain, type 2 Y89_1544 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Y89_1544 IPR036097 Y89_1544 Y89_1544 IPR036890 Y89_1544 Y89_1545 IPR008007 Peptidase M42 Y89_1545 IPR017537 Peptidase M42, hydrolase Y89_1545 IPR023367 Peptidase M42, domain 2 Y89_1546 IPR000182 GNAT domain Y89_1546 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site Y89_1546 IPR013651 ATP-grasp fold, RimK-type Y89_1546 IPR013815 ATP-grasp fold, subdomain 1 Y89_1546 IPR016181 Acyl-CoA N-acyltransferase Y89_1546 IPR017534 GNAT-acetyltransferase Y89_1547 IPR001962 Asparagine synthase Y89_1547 IPR006426 Asparagine synthase, glutamine-hydrolyzing Y89_1547 IPR017535 Asparagine synthase family amidotransferase Y89_1547 IPR017932 Glutamine amidotransferase type 2 domain Y89_1547 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_1548 IPR000835 MarR-type HTH domain Y89_1548 IPR036388 Y89_1548 Y89_1548 IPR036390 Y89_1548 Y89_1549 IPR002781 Transmembrane protein TauE like Y89_1550 IPR006076 FAD dependent oxidoreductase Y89_1550 IPR008471 MnmC-like methyltransferase Y89_1550 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal Y89_1550 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC Y89_1550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1550 IPR036188 Y89_1550 Y89_1551 IPR022488 Polyphosphate kinase-2-related Y89_1551 IPR022489 Polyphosphate:AMP phosphotransferase Y89_1551 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1552 IPR002155 Thiolase Y89_1552 IPR016039 Thiolase-like Y89_1552 IPR020610 Thiolase, active site Y89_1552 IPR020613 Thiolase, conserved site Y89_1552 IPR020615 Thiolase, acyl-enzyme intermediate active site Y89_1552 IPR020616 Thiolase, N-terminal Y89_1552 IPR020617 Thiolase, C-terminal Y89_1553 IPR007432 Protein of unknown function DUF480 Y89_1553 IPR036388 Y89_1553 Y89_1553 IPR036390 Y89_1553 Y89_1554 IPR006231 Malate:quinone-oxidoreductase Y89_1554 IPR036188 Y89_1554 Y89_1556 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Y89_1556 IPR019479 Peroxiredoxin, C-terminal Y89_1556 IPR024706 Peroxiredoxin, AhpC-type Y89_1556 IPR036249 Y89_1556 Y89_1557 IPR001638 Extracellular solute-binding protein, family 3 Y89_1557 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates Y89_1557 IPR015168 SsuA/THI5-like Y89_1558 IPR000515 MetI-like domain Y89_1558 IPR035906 Y89_1558 Y89_1559 IPR003439 ABC transporter-like Y89_1559 IPR003593 AAA+ ATPase domain Y89_1559 IPR017871 ABC transporter, conserved site Y89_1559 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1560 IPR005025 NADPH-dependent FMN reductase-like Y89_1560 IPR020048 NADPH-dependent FMN reductase, SsuE Y89_1560 IPR029039 Flavoprotein-like Y89_1561 IPR001638 Extracellular solute-binding protein, family 3 Y89_1561 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates Y89_1561 IPR015168 SsuA/THI5-like Y89_1562 IPR011251 Luciferase-like domain Y89_1562 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent Y89_1562 IPR036661 Y89_1562 Y89_1563 IPR000515 MetI-like domain Y89_1563 IPR035906 Y89_1563 Y89_1564 IPR003439 ABC transporter-like Y89_1564 IPR003593 AAA+ ATPase domain Y89_1564 IPR017871 ABC transporter, conserved site Y89_1564 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1565 IPR004606 Molybdenum-pterin binding Y89_1565 IPR005116 Transport-associated OB, type 1 Y89_1565 IPR008995 Molybdate/tungstate binding, C-terminal Y89_1566 IPR014984 HopJ type III effector protein Y89_1566 IPR038604 Y89_1566 Y89_1567 IPR023163 SMc04008-like domain Y89_1567 IPR036810 Y89_1567 Y89_1568 IPR006157 Dihydroneopterin aldolase/epimerase domain Y89_1569 IPR001474 GTP cyclohydrolase I Y89_1569 IPR018234 GTP cyclohydrolase I, conserved site Y89_1569 IPR020602 GTP cyclohydrolase I domain Y89_1570 IPR002347 Glucose/ribitol dehydrogenase Y89_1570 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_1570 IPR036291 Y89_1570 Y89_1571 IPR011008 Dimeric alpha-beta barrel Y89_1572 IPR001094 Flavodoxin Y89_1572 IPR008254 Flavodoxin/nitric oxide synthase Y89_1572 IPR029039 Flavoprotein-like Y89_1573 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Y89_1573 IPR003346 Transposase, IS116/IS110/IS902 Y89_1574 IPR000847 Transcription regulator HTH, LysR Y89_1574 IPR005119 LysR, substrate-binding Y89_1574 IPR036388 Y89_1574 Y89_1574 IPR036390 Y89_1574 Y89_1575 IPR005538 LrgA/CidA family Y89_1576 IPR007300 CidB/LrgB family Y89_1577 IPR001303 Class II aldolase/adducin N-terminal Y89_1577 IPR036409 Y89_1577 Y89_1578 IPR000073 Alpha/beta hydrolase fold-1 Y89_1578 IPR000639 Epoxide hydrolase-like Y89_1578 IPR029058 Alpha/Beta hydrolase fold Y89_1580 IPR002347 Glucose/ribitol dehydrogenase Y89_1580 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_1580 IPR036291 Y89_1580 Y89_1581 IPR001753 Crotonase superfamily Y89_1581 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Y89_1581 IPR029045 ClpP/crotonase-like domain Y89_1582 IPR008579 Domain of unknown function DUF861, cupin-3 Y89_1582 IPR011051 RmlC-like cupin domain Y89_1582 IPR014710 RmlC-like jelly roll fold Y89_1583 IPR006076 FAD dependent oxidoreductase Y89_1583 IPR036188 Y89_1583 Y89_1584 IPR009057 Homeodomain-like Y89_1584 IPR018060 DNA binding HTH domain, AraC-type Y89_1584 IPR018062 HTH domain AraC-type, conserved site Y89_1584 IPR032710 Y89_1584 Y89_1584 IPR037401 Y89_1584 Y89_1585 IPR010727 Protein of unknown function DUF1302 Y89_1586 IPR010752 Protein of unknown function DUF1329 Y89_1587 IPR000792 Transcription regulator LuxR, C-terminal Y89_1587 IPR011990 Tetratricopeptide-like helical domain Y89_1587 IPR016032 Signal transduction response regulator, C-terminal effector Y89_1587 IPR036388 Y89_1587 Y89_1588 IPR032698 Y89_1588 Y89_1589 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase Y89_1589 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal Y89_1589 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain Y89_1589 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal Y89_1589 IPR036291 Y89_1589 Y89_1590 IPR001017 Dehydrogenase, E1 component Y89_1590 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha Y89_1590 IPR029061 Thiamin diphosphate-binding fold Y89_1591 IPR005475 Transketolase-like, pyrimidine-binding domain Y89_1591 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Y89_1591 IPR029061 Thiamin diphosphate-binding fold Y89_1591 IPR033248 Y89_1591 Y89_1592 IPR000089 Biotin/lipoyl attachment Y89_1592 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Y89_1592 IPR004167 E3 binding Y89_1592 IPR011053 Single hybrid motif Y89_1592 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_1592 IPR036625 Y89_1592 Y89_1593 IPR021257 Protein of unknown function DUF2809 Y89_1595 IPR009813 Uncharacterised protein family YebG Y89_1595 IPR038627 Y89_1595 Y89_1596 IPR021245 Protein of unknown function DUF2790 Y89_1598 IPR007627 RNA polymerase sigma-70 region 2 Y89_1598 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_1598 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_1598 IPR013325 RNA polymerase sigma factor, region 2 Y89_1598 IPR014284 RNA polymerase sigma-70 like domain Y89_1598 IPR036388 Y89_1598 Y89_1599 IPR006860 FecR protein Y89_1599 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_1599 IPR032623 Y89_1599 Y89_1600 IPR000531 TonB-dependent receptor, beta-barrel Y89_1600 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor Y89_1600 IPR011276 TonB-dependent haem/haemoglobin receptor Y89_1600 IPR011662 Secretin/TonB, short N-terminal Y89_1600 IPR012910 TonB-dependent receptor, plug Y89_1600 IPR036942 Y89_1600 Y89_1600 IPR037066 Y89_1600 Y89_1601 IPR010495 Haem-binding HasA Y89_1601 IPR036912 Y89_1601 Y89_1602 IPR003439 ABC transporter-like Y89_1602 IPR003593 AAA+ ATPase domain Y89_1602 IPR010128 ATPase, type I secretion system, PrtD Y89_1602 IPR011527 ABC transporter type 1, transmembrane domain Y89_1602 IPR017871 ABC transporter, conserved site Y89_1602 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1602 IPR036640 Y89_1602 Y89_1603 IPR003997 RTX secretion protein D, Gram-negative bacteria Y89_1603 IPR006143 RND efflux pump, membrane fusion protein Y89_1603 IPR010129 Type I secretion membrane fusion protein, HlyD Y89_1604 IPR003423 Outer membrane efflux protein Y89_1604 IPR010130 Type I secretion outer membrane protein, TolC Y89_1605 IPR021898 Protein of unknown function DUF3509 Y89_1606 IPR009315 Phosphate-starvation-induced PsiE Y89_1606 IPR020948 Phosphate-starvation-induced PsiE-like Y89_1607 IPR032317 Y89_1607 Y89_1610 IPR010780 Protein of unknown function DUF1375 Y89_1611 IPR000847 Transcription regulator HTH, LysR Y89_1611 IPR005119 LysR, substrate-binding Y89_1611 IPR036388 Y89_1611 Y89_1611 IPR036390 Y89_1611 Y89_1612 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_1612 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Y89_1612 IPR008333 Oxidoreductase, FAD-binding domain Y89_1612 IPR017938 Riboflavin synthase-like beta-barrel Y89_1612 IPR039261 Y89_1612 Y89_1613 IPR008719 Nitrous oxide reductase accessory protein NosL Y89_1614 IPR032688 Y89_1614 Y89_1615 IPR003439 ABC transporter-like Y89_1615 IPR003593 AAA+ ATPase domain Y89_1615 IPR017871 ABC transporter, conserved site Y89_1615 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1616 IPR006626 Parallel beta-helix repeat Y89_1616 IPR006633 Carbohydrate-binding/sugar hydrolysis domain Y89_1616 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Y89_1616 IPR011050 Pectin lyase fold/virulence factor Y89_1616 IPR012334 Pectin lyase fold Y89_1616 IPR022441 Parallel beta-helix repeat-2 Y89_1616 IPR026464 Nitrous oxide reductase family maturation protein NosD Y89_1617 IPR001505 Copper centre Cu(A) Y89_1617 IPR002429 Cytochrome c oxidase subunit II C-terminal Y89_1617 IPR008972 Cupredoxin Y89_1617 IPR011045 Nitrous oxide reductase, N-terminal Y89_1617 IPR015943 WD40/YVTN repeat-like-containing domain Y89_1617 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Y89_1617 IPR023644 Nitrous-oxide reductase Y89_1618 IPR007329 FMN-binding Y89_1618 IPR011399 Nitrous oxide reductase expression regulator NosR Y89_1618 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_1619 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_1619 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_1620 IPR007138 Antibiotic biosynthesis monooxygenase-like domain Y89_1620 IPR011008 Dimeric alpha-beta barrel Y89_1621 IPR023368 Uncharacterised protein family UPF0066, conserved site Y89_1621 IPR023370 TsaA-like domain Y89_1621 IPR036413 Y89_1621 Y89_1621 IPR036414 Y89_1621 Y89_1622 IPR002347 Glucose/ribitol dehydrogenase Y89_1622 IPR036291 Y89_1622 Y89_1623 IPR021218 Protein of unknown function DUF2784 Y89_1624 IPR005569 Arc-like DNA binding Y89_1624 IPR010985 Ribbon-helix-helix Y89_1624 IPR013321 Arc-type ribbon-helix-helix Y89_1625 IPR003439 ABC transporter-like Y89_1625 IPR003593 AAA+ ATPase domain Y89_1625 IPR012693 ABC transporter, phosphonate import, PhnC Y89_1625 IPR017871 ABC transporter, conserved site Y89_1625 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1626 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Y89_1626 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein Y89_1627 IPR000515 MetI-like domain Y89_1627 IPR005769 ABC transporter, permease PhnE/PtxC Y89_1627 IPR035906 Y89_1627 Y89_1628 IPR000524 Transcription regulator HTH, GntR Y89_1628 IPR011663 UbiC transcription regulator-associated Y89_1628 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF Y89_1628 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Y89_1628 IPR036388 Y89_1628 Y89_1628 IPR036390 Y89_1628 Y89_1629 IPR009609 Phosphonate metabolism PhnG Y89_1630 IPR008772 Bacterial phosphonate metabolism, PhnH Y89_1630 IPR038058 Y89_1630 Y89_1631 IPR008773 Phosphonate metabolism protein PhnI Y89_1632 IPR010306 Phosphonate metabolism PhnJ Y89_1633 IPR003439 ABC transporter-like Y89_1633 IPR003593 AAA+ ATPase domain Y89_1633 IPR012700 Phosphonate C-P lyase system, PhnK Y89_1633 IPR017871 ABC transporter, conserved site Y89_1633 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1634 IPR003439 ABC transporter-like Y89_1634 IPR003593 AAA+ ATPase domain Y89_1634 IPR012701 Phosphonate C-P lyase system, PhnL Y89_1634 IPR017871 ABC transporter, conserved site Y89_1634 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1635 IPR011059 Metal-dependent hydrolase, composite domain Y89_1635 IPR012696 Phosphonate metabolism PhnM Y89_1635 IPR013108 Amidohydrolase 3 Y89_1635 IPR032466 Y89_1635 Y89_1636 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Y89_1636 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN Y89_1636 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1637 IPR001279 Beta-lactamase-like Y89_1637 IPR017693 Phosphonate metabolism protein PhnP Y89_1637 IPR036866 Y89_1637 Y89_1641 IPR000182 GNAT domain Y89_1641 IPR016181 Acyl-CoA N-acyltransferase Y89_1643 IPR003010 Carbon-nitrogen hydrolase Y89_1643 IPR023719 Aliphatic amidase Y89_1643 IPR036526 Y89_1643 Y89_1645 IPR000709 Leu/Ile/Val-binding protein Y89_1645 IPR028082 Periplasmic binding protein-like I Y89_1646 IPR005561 ANTAR domain Y89_1646 IPR008327 Signal transduction response regulator, antiterminator Y89_1646 IPR011006 CheY-like superfamily Y89_1646 IPR036388 Y89_1646 Y89_1647 IPR003211 AmiS/UreI transporter Y89_1647 IPR038523 Y89_1647 Y89_1648 IPR010907 Calcium-mediated lectin Y89_1648 IPR016927 Lectin, sugar-binding Y89_1648 IPR036684 Y89_1648 Y89_1649 IPR039562 Y89_1649 Y89_1650 IPR016926 Uncharacterised conserved protein UCP029594 Y89_1650 IPR022604 Protein of unknown function DUF2955 Y89_1651 IPR000620 Drug/metabolite transporter Y89_1652 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Y89_1652 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_1652 IPR011780 D-serine ammonia-lyase Y89_1652 IPR036052 Y89_1652 Y89_1653 IPR008146 Glutamine synthetase, catalytic domain Y89_1653 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_1653 IPR036651 Y89_1653 Y89_1654 IPR011701 Major facilitator superfamily Y89_1654 IPR036259 Y89_1654 Y89_1655 IPR018641 Transferase 1, rSAM/selenodomain-associated Y89_1655 IPR029044 Nucleotide-diphospho-sugar transferases Y89_1656 IPR009875 PilZ domain Y89_1656 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Y89_1656 IPR012349 FMN-binding split barrel Y89_1657 IPR007809 FlgN-like domain Y89_1657 IPR036679 Y89_1657 Y89_1658 IPR007412 Anti-sigma-28 factor, FlgM Y89_1658 IPR031316 Y89_1658 Y89_1658 IPR035890 Y89_1658 Y89_1659 IPR013974 SAF domain Y89_1659 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Y89_1660 IPR001789 Signal transduction response regulator, receiver domain Y89_1660 IPR002545 CheW-like protein Y89_1660 IPR011006 CheY-like superfamily Y89_1660 IPR024181 Chemotaxis response regulator CheV Y89_1660 IPR036061 Y89_1660 Y89_1661 IPR000780 MCP methyltransferase, CheR-type Y89_1661 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal Y89_1661 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Y89_1661 IPR026024 Chemotaxis protein methyltransferase CheR Y89_1661 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1661 IPR036804 Y89_1661 Y89_1662 IPR002645 STAS domain Y89_1662 IPR036513 Y89_1662 Y89_1663 IPR001789 Signal transduction response regulator, receiver domain Y89_1663 IPR001932 Protein phosphatase 2C (PP2C)-like domain Y89_1663 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1663 IPR011006 CheY-like superfamily Y89_1663 IPR036457 Y89_1663 Y89_1663 IPR036890 Y89_1663 Y89_1664 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_1664 IPR036641 Y89_1664 Y89_1665 IPR001650 Helicase, C-terminal Y89_1665 IPR002121 HRDC domain Y89_1665 IPR004589 DNA helicase, ATP-dependent, RecQ type Y89_1665 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial Y89_1665 IPR010997 HRDC-like Y89_1665 IPR011545 DEAD/DEAH box helicase domain Y89_1665 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_1665 IPR018982 RQC domain Y89_1665 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1665 IPR032284 Y89_1665 Y89_1665 IPR036388 Y89_1665 Y89_1666 IPR000160 GGDEF domain Y89_1666 IPR029787 Nucleotide cyclase Y89_1667 IPR021243 Protein of unknown function DUF2804 Y89_1668 IPR000835 MarR-type HTH domain Y89_1668 IPR023187 Transcriptional regulator MarR-type, conserved site Y89_1668 IPR036388 Y89_1668 Y89_1668 IPR036390 Y89_1668 Y89_1669 IPR020011 Motility protein FimV, C-terminal Y89_1669 IPR020012 Motility protein FimV, N-terminal Y89_1669 IPR038440 Y89_1669 Y89_1670 IPR000184 Bacterial surface antigen (D15) Y89_1670 IPR002641 Patatin/Phospholipase A2-related Y89_1670 IPR010827 Surface antigen variable number Y89_1670 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Y89_1671 IPR011893 Selenoprotein, Rdx type Y89_1671 IPR036249 Y89_1671 Y89_1672 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Y89_1672 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase Y89_1672 IPR036291 Y89_1672 Y89_1673 IPR011701 Major facilitator superfamily Y89_1673 IPR036259 Y89_1673 Y89_1674 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1675 IPR009081 Acyl carrier protein-like Y89_1675 IPR036736 Y89_1675 Y89_1676 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 Y89_1676 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal Y89_1676 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Y89_1676 IPR016039 Thiolase-like Y89_1677 IPR004964 Phenazine biosynthesis protein A/B Y89_1677 IPR032710 Y89_1677 Y89_1677 IPR037401 Y89_1677 Y89_1678 IPR001128 Cytochrome P450 Y89_1678 IPR002397 Cytochrome P450, B-class Y89_1678 IPR036396 Y89_1678 Y89_1679 IPR002347 Glucose/ribitol dehydrogenase Y89_1679 IPR036291 Y89_1679 Y89_1680 IPR001242 Condensation domain Y89_1680 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_1681 IPR002938 Monooxygenase, FAD-binding Y89_1681 IPR036188 Y89_1681 Y89_1682 IPR000873 AMP-dependent synthetase/ligase Y89_1682 IPR001031 Thioesterase Y89_1682 IPR001242 Condensation domain Y89_1682 IPR006162 Phosphopantetheine attachment site Y89_1682 IPR009081 Acyl carrier protein-like Y89_1682 IPR010071 Amino acid adenylation domain Y89_1682 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Y89_1682 IPR020845 AMP-binding, conserved site Y89_1682 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_1682 IPR025110 AMP-binding enzyme C-terminal domain Y89_1682 IPR029058 Alpha/Beta hydrolase fold Y89_1682 IPR036736 Y89_1682 Y89_1683 IPR001907 ATP-dependent Clp protease proteolytic subunit Y89_1683 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Y89_1683 IPR029045 ClpP/crotonase-like domain Y89_1683 IPR033135 Y89_1683 Y89_1684 IPR016516 Uncharacterised conserved protein UCP07580 Y89_1685 IPR000073 Alpha/beta hydrolase fold-1 Y89_1685 IPR002347 Glucose/ribitol dehydrogenase Y89_1685 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_1685 IPR029058 Alpha/Beta hydrolase fold Y89_1685 IPR036291 Y89_1685 Y89_1686 IPR000994 Peptidase M24, structural domain Y89_1686 IPR036005 Y89_1686 Y89_1687 IPR000551 MerR-type HTH domain Y89_1687 IPR009061 DNA binding domain, putative Y89_1688 IPR000847 Transcription regulator HTH, LysR Y89_1688 IPR005119 LysR, substrate-binding Y89_1688 IPR036388 Y89_1688 Y89_1688 IPR036390 Y89_1688 Y89_1689 IPR006750 Protein of unknown function DUF606 Y89_1690 IPR007312 Phosphoesterase Y89_1690 IPR008475 Bacterial phospholipase C, C-terminal domain Y89_1690 IPR017767 Bacterial phospholipase C, phosphocholine-specific Y89_1690 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_1693 IPR000515 MetI-like domain Y89_1693 IPR005769 ABC transporter, permease PhnE/PtxC Y89_1693 IPR035906 Y89_1693 Y89_1694 IPR000515 MetI-like domain Y89_1694 IPR035906 Y89_1694 Y89_1695 IPR003439 ABC transporter-like Y89_1695 IPR003593 AAA+ ATPase domain Y89_1695 IPR017871 ABC transporter, conserved site Y89_1695 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1696 IPR001638 Extracellular solute-binding protein, family 3 Y89_1696 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Y89_1696 IPR030836 Y89_1696 Y89_1697 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Y89_1697 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_1697 IPR013328 Dehydrogenase, multihelical Y89_1697 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type Y89_1697 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Y89_1697 IPR036291 Y89_1697 Y89_1698 IPR000160 GGDEF domain Y89_1698 IPR001633 EAL domain Y89_1698 IPR005330 MHYT Y89_1698 IPR029787 Nucleotide cyclase Y89_1698 IPR035919 Y89_1698 Y89_1699 IPR000917 Sulfatase Y89_1699 IPR012549 Domain of unknown function DUF1705 Y89_1699 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_1699 IPR017850 Alkaline-phosphatase-like, core domain Y89_1700 IPR006015 Universal stress protein A Y89_1700 IPR006016 UspA Y89_1700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_1701 IPR000330 SNF2-related Y89_1701 IPR001650 Helicase, C-terminal Y89_1701 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_1701 IPR022737 RNA polymerase recycling, bacterial, C-terminal Y89_1701 IPR023949 RNA polymerase-associated protein RapA Y89_1701 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1701 IPR038718 Y89_1701 Y89_1703 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like Y89_1703 IPR037151 Y89_1703 Y89_1706 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein Y89_1707 IPR012451 Protein of unknown function DUF1656 Y89_1708 IPR006143 RND efflux pump, membrane fusion protein Y89_1708 IPR039562 Y89_1708 Y89_1709 IPR011701 Major facilitator superfamily Y89_1709 IPR036259 Y89_1709 Y89_1710 IPR002539 MaoC-like domain Y89_1710 IPR003965 Fatty acid synthase Y89_1710 IPR029069 HotDog domain Y89_1711 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 Y89_1711 IPR022742 Putative lysophospholipase Y89_1711 IPR029058 Alpha/Beta hydrolase fold Y89_1712 IPR000873 AMP-dependent synthetase/ligase Y89_1712 IPR020845 AMP-binding, conserved site Y89_1712 IPR025110 AMP-binding enzyme C-terminal domain Y89_1713 IPR000873 AMP-dependent synthetase/ligase Y89_1713 IPR020845 AMP-binding, conserved site Y89_1713 IPR025110 AMP-binding enzyme C-terminal domain Y89_1714 IPR013406 Conserved hypothetical protein CHP02574, addiction module Y89_1715 IPR001650 Helicase, C-terminal Y89_1715 IPR003593 AAA+ ATPase domain Y89_1715 IPR007502 Helicase-associated domain Y89_1715 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type Y89_1715 IPR011709 Domain of unknown function DUF1605 Y89_1715 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_1715 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal Y89_1715 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1716 IPR001952 Alkaline phosphatase Y89_1716 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_1716 IPR017850 Alkaline-phosphatase-like, core domain Y89_1716 IPR018299 Alkaline phosphatase, active site Y89_1717 IPR001310 Histidine triad (HIT) protein Y89_1717 IPR036265 Y89_1717 Y89_1718 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Y89_1718 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Y89_1718 IPR037026 Y89_1718 Y89_1719 IPR025391 Domain of unknown function DUF4123 Y89_1723 IPR000868 Isochorismatase-like Y89_1723 IPR036380 Y89_1723 Y89_1724 IPR002110 Ankyrin repeat Y89_1724 IPR020683 Ankyrin repeat-containing domain Y89_1724 IPR036770 Y89_1724 Y89_1725 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal Y89_1725 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Y89_1725 IPR016039 Thiolase-like Y89_1726 IPR007627 RNA polymerase sigma-70 region 2 Y89_1726 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_1726 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_1726 IPR013325 RNA polymerase sigma factor, region 2 Y89_1726 IPR014284 RNA polymerase sigma-70 like domain Y89_1726 IPR036388 Y89_1726 Y89_1727 IPR027383 Putative zinc-finger Y89_1729 IPR007801 Uncharacterised protein family UPF0276 Y89_1729 IPR036237 Y89_1729 Y89_1730 IPR018640 Protein of unknown function DUF2063 Y89_1731 IPR032808 Y89_1731 Y89_1732 IPR010870 Phosphate-selective porin O/P Y89_1732 IPR023614 Porin domain Y89_1733 IPR010870 Phosphate-selective porin O/P Y89_1733 IPR023614 Porin domain Y89_1735 IPR002347 Glucose/ribitol dehydrogenase Y89_1735 IPR036291 Y89_1735 Y89_1737 IPR003844 Uncharacterised protein family UPF0060 Y89_1740 IPR001650 Helicase, C-terminal Y89_1740 IPR011545 DEAD/DEAH box helicase domain Y89_1740 IPR013701 DEAD/H associated Y89_1740 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_1740 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1741 IPR001789 Signal transduction response regulator, receiver domain Y89_1741 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1741 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_1741 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_1741 IPR011006 CheY-like superfamily Y89_1741 IPR035965 Y89_1741 Y89_1741 IPR036097 Y89_1741 Y89_1741 IPR036890 Y89_1741 Y89_1741 IPR038377 Y89_1741 Y89_1742 IPR000182 GNAT domain Y89_1742 IPR016181 Acyl-CoA N-acyltransferase Y89_1743 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_1743 IPR009057 Homeodomain-like Y89_1743 IPR018060 DNA binding HTH domain, AraC-type Y89_1743 IPR037923 Y89_1743 Y89_1744 IPR000531 TonB-dependent receptor, beta-barrel Y89_1744 IPR010105 TonB-dependent siderophore receptor Y89_1744 IPR010917 TonB-dependent receptor, conserved site Y89_1744 IPR012910 TonB-dependent receptor, plug Y89_1744 IPR036942 Y89_1744 Y89_1744 IPR037066 Y89_1744 Y89_1745 IPR002123 Phospholipid/glycerol acyltransferase Y89_1745 IPR011701 Major facilitator superfamily Y89_1745 IPR036259 Y89_1745 Y89_1746 IPR002059 Cold-shock protein, DNA-binding Y89_1746 IPR011129 Cold shock protein Y89_1746 IPR012156 Cold shock, CspA Y89_1746 IPR012340 Nucleic acid-binding, OB-fold Y89_1746 IPR019844 Cold-shock conserved site Y89_1747 IPR000390 Small multidrug resistance protein family Y89_1748 IPR002657 Bile acid:sodium symporter Y89_1748 IPR038770 Y89_1748 Y89_1749 IPR007476 Putative exonuclease, RdgC Y89_1750 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal Y89_1750 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain Y89_1750 IPR036944 Y89_1750 Y89_1751 IPR010652 Protein of unknown function DUF1232 Y89_1752 IPR001638 Extracellular solute-binding protein, family 3 Y89_1753 IPR001387 Cro/C1-type helix-turn-helix domain Y89_1753 IPR010982 Lambda repressor-like, DNA-binding domain Y89_1755 IPR006597 Sel1-like Y89_1755 IPR011990 Tetratricopeptide-like helical domain Y89_1756 IPR000160 GGDEF domain Y89_1756 IPR000644 CBS domain Y89_1756 IPR001633 EAL domain Y89_1756 IPR029787 Nucleotide cyclase Y89_1756 IPR035919 Y89_1756 Y89_1757 IPR001478 PDZ domain Y89_1757 IPR004447 C-terminal-processing peptidase S41A Y89_1757 IPR005151 Tail specific protease Y89_1757 IPR020992 Tail specific protease, C-terminal Y89_1757 IPR029045 ClpP/crotonase-like domain Y89_1757 IPR036034 Y89_1757 Y89_1758 IPR011032 GroES (chaperonin 10)-like Y89_1758 IPR013149 Alcohol dehydrogenase, C-terminal Y89_1758 IPR013154 Alcohol dehydrogenase GroES-like Y89_1758 IPR014189 Quinone oxidoreductase PIG3 Y89_1758 IPR020843 Polyketide synthase, enoylreductase Y89_1758 IPR036291 Y89_1758 Y89_1759 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial Y89_1759 IPR023214 HAD-like domain Y89_1759 IPR036412 Y89_1759 Y89_1760 IPR003439 ABC transporter-like Y89_1760 IPR003593 AAA+ ATPase domain Y89_1760 IPR008995 Molybdate/tungstate binding, C-terminal Y89_1760 IPR013611 Transport-associated OB, type 2 Y89_1760 IPR017871 ABC transporter, conserved site Y89_1760 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1761 IPR000515 MetI-like domain Y89_1761 IPR035906 Y89_1761 Y89_1762 IPR000515 MetI-like domain Y89_1762 IPR035906 Y89_1762 Y89_1765 IPR000524 Transcription regulator HTH, GntR Y89_1765 IPR011663 UbiC transcription regulator-associated Y89_1765 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Y89_1765 IPR036388 Y89_1765 Y89_1765 IPR036390 Y89_1765 Y89_1766 IPR000182 GNAT domain Y89_1766 IPR016181 Acyl-CoA N-acyltransferase Y89_1767 IPR001948 Peptidase M18 Y89_1767 IPR022984 M18 family aminopeptidase 2, putative Y89_1767 IPR023358 Peptidase M18, domain 2 Y89_1768 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Y89_1768 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Y89_1768 IPR020103 Pseudouridine synthase, catalytic domain Y89_1769 IPR005527 Septum formation topological specificity factor MinE Y89_1769 IPR036707 Y89_1769 Y89_1770 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Y89_1770 IPR010223 ATP binding protein MinD, bacterial-type Y89_1770 IPR025501 ATP binding protein MinD Y89_1770 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1771 IPR005526 Septum formation inhibitor MinC, C-terminal Y89_1771 IPR007874 Septum formation inhibitor MinC, N-terminal Y89_1771 IPR013033 Septum formation inhibitor MinC Y89_1771 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal Y89_1771 IPR036145 Y89_1771 Y89_1771 IPR038061 Y89_1771 Y89_1772 IPR004960 Bacterial lipid A biosynthesis acyltransferase Y89_1772 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase Y89_1773 IPR002641 Patatin/Phospholipase A2-related Y89_1773 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Y89_1774 IPR003829 Pirin, N-terminal domain Y89_1774 IPR008778 Pirin, C-terminal domain Y89_1774 IPR011051 RmlC-like cupin domain Y89_1774 IPR012093 Pirin Y89_1774 IPR014710 RmlC-like jelly roll fold Y89_1775 IPR007428 VacJ-like lipoprotein Y89_1776 IPR029058 Alpha/Beta hydrolase fold Y89_1777 IPR018638 Domain of unknown function DUF2061, membrane Y89_1778 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain Y89_1779 IPR007436 Protein of unknown function DUF485 Y89_1780 IPR001734 Sodium/solute symporter Y89_1780 IPR018212 Sodium/solute symporter, conserved site Y89_1780 IPR038377 Y89_1780 Y89_1781 IPR000595 Cyclic nucleotide-binding domain Y89_1781 IPR000644 CBS domain Y89_1781 IPR005105 Protein-PII uridylyltransferase, N-terminal Y89_1781 IPR014710 RmlC-like jelly roll fold Y89_1781 IPR018490 Cyclic nucleotide-binding-like Y89_1781 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Y89_1782 IPR012337 Ribonuclease H-like domain Y89_1782 IPR013520 Exonuclease, RNase T/DNA polymerase III Y89_1782 IPR036397 Y89_1782 Y89_1783 IPR021738 Protein of unknown function DUF3309 Y89_1784 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Y89_1784 IPR003346 Transposase, IS116/IS110/IS902 Y89_1785 IPR007434 Protein of unknown function DUF482 Y89_1785 IPR016181 Acyl-CoA N-acyltransferase Y89_1786 IPR021245 Protein of unknown function DUF2790 Y89_1787 IPR003439 ABC transporter-like Y89_1787 IPR003593 AAA+ ATPase domain Y89_1787 IPR011527 ABC transporter type 1, transmembrane domain Y89_1787 IPR017871 ABC transporter, conserved site Y89_1787 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1787 IPR036640 Y89_1787 Y89_1788 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Y89_1788 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Y89_1788 IPR029000 Cyclophilin-like domain Y89_1789 IPR000073 Alpha/beta hydrolase fold-1 Y89_1789 IPR029058 Alpha/Beta hydrolase fold Y89_1790 IPR000847 Transcription regulator HTH, LysR Y89_1790 IPR005119 LysR, substrate-binding Y89_1790 IPR036388 Y89_1790 Y89_1790 IPR036390 Y89_1790 Y89_1792 IPR003680 Flavodoxin-like fold Y89_1792 IPR023048 NADH-azoreductase, FMN-dependent Y89_1792 IPR029039 Flavoprotein-like Y89_1793 IPR000620 Drug/metabolite transporter Y89_1794 IPR002547 tRNA-binding domain Y89_1794 IPR008231 Export-related chaperone protein CsaA Y89_1794 IPR012340 Nucleic acid-binding, OB-fold Y89_1795 IPR009057 Homeodomain-like Y89_1795 IPR011051 RmlC-like cupin domain Y89_1795 IPR014710 RmlC-like jelly roll fold Y89_1795 IPR018060 DNA binding HTH domain, AraC-type Y89_1795 IPR020449 Transcription regulator HTH, AraC- type Y89_1796 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Y89_1796 IPR029052 Metallo-dependent phosphatase-like Y89_1797 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Y89_1798 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase Y89_1798 IPR007894 MASE2 Y89_1798 IPR029787 Nucleotide cyclase Y89_1799 IPR009305 Protein of unknown function DUF962 Y89_1800 IPR009057 Homeodomain-like Y89_1800 IPR018060 DNA binding HTH domain, AraC-type Y89_1800 IPR020449 Transcription regulator HTH, AraC- type Y89_1800 IPR032687 Y89_1800 Y89_1801 IPR005586 Protein of unknown function DUF330 Y89_1802 IPR003399 Mammalian cell entry-related Y89_1803 IPR003439 ABC transporter-like Y89_1803 IPR003593 AAA+ ATPase domain Y89_1803 IPR017871 ABC transporter, conserved site Y89_1803 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1804 IPR003453 Permease domain Y89_1804 IPR030802 Y89_1804 Y89_1805 IPR003445 Cation transporter Y89_1805 IPR004772 Potassium uptake protein TrkH family Y89_1806 IPR005358 Putative zinc- or iron-chelating domain containing protein Y89_1807 IPR000415 Nitroreductase-like Y89_1807 IPR026021 Putative NAD(P)H nitroreductase YdjA-like Y89_1807 IPR029479 Nitroreductase Y89_1809 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1809 IPR003660 HAMP linker domain Y89_1809 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_1809 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_1809 IPR036097 Y89_1809 Y89_1809 IPR036890 Y89_1809 Y89_1810 IPR012899 LTXXQ motif family protein Y89_1811 IPR001789 Signal transduction response regulator, receiver domain Y89_1811 IPR001867 Signal transduction response regulator, C-terminal Y89_1811 IPR011006 CheY-like superfamily Y89_1811 IPR016032 Signal transduction response regulator, C-terminal effector Y89_1811 IPR036388 Y89_1811 Y89_1813 IPR005545 YCII-related Y89_1813 IPR011008 Dimeric alpha-beta barrel Y89_1814 IPR006008 Intracellular septation protein A Y89_1815 IPR003141 Polymerase/histidinol phosphatase, N-terminal Y89_1815 IPR004013 PHP, C-terminal Y89_1815 IPR016195 Polymerase/histidinol phosphatase-like Y89_1816 IPR006070 YrdC-like domain Y89_1816 IPR017945 DHBP synthase RibB-like alpha/beta domain Y89_1817 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA Y89_1818 IPR005234 Chromosome segregation/condensation protein ScpB Y89_1818 IPR036388 Y89_1818 Y89_1818 IPR036390 Y89_1818 Y89_1820 IPR010710 Protein of unknown function DUF1289 Y89_1821 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I Y89_1821 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain Y89_1821 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain Y89_1821 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site Y89_1821 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family Y89_1821 IPR036291 Y89_1821 Y89_1822 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase Y89_1822 IPR004786 6-phosphogluconate dehydratase Y89_1822 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site Y89_1822 IPR037237 Y89_1822 Y89_1823 IPR003836 Glucokinase Y89_1824 IPR001789 Signal transduction response regulator, receiver domain Y89_1824 IPR001867 Signal transduction response regulator, C-terminal Y89_1824 IPR011006 CheY-like superfamily Y89_1824 IPR016032 Signal transduction response regulator, C-terminal effector Y89_1824 IPR036388 Y89_1824 Y89_1825 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1825 IPR003660 HAMP linker domain Y89_1825 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_1825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_1825 IPR036097 Y89_1825 Y89_1825 IPR036890 Y89_1825 Y89_1826 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_1827 IPR000515 MetI-like domain Y89_1827 IPR035906 Y89_1827 Y89_1828 IPR000515 MetI-like domain Y89_1828 IPR035906 Y89_1828 Y89_1829 IPR003439 ABC transporter-like Y89_1829 IPR003593 AAA+ ATPase domain Y89_1829 IPR005116 Transport-associated OB, type 1 Y89_1829 IPR008995 Molybdate/tungstate binding, C-terminal Y89_1829 IPR017871 ABC transporter, conserved site Y89_1829 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1830 IPR007049 Carbohydrate-selective porin OprB Y89_1830 IPR038673 Y89_1830 Y89_1831 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase Y89_1831 IPR011013 Galactose mutarotase-like domain Y89_1831 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup Y89_1831 IPR025532 Glucose-6-phosphate 1-epimerase Y89_1832 IPR000281 Helix-turn-helix protein RpiR Y89_1832 IPR001347 Sugar isomerase (SIS) Y89_1832 IPR009057 Homeodomain-like Y89_1832 IPR036388 Y89_1832 Y89_1833 IPR001282 Glucose-6-phosphate dehydrogenase Y89_1833 IPR019796 Glucose-6-phosphate dehydrogenase, active site Y89_1833 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding Y89_1833 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal Y89_1833 IPR036291 Y89_1833 Y89_1834 IPR005900 6-phosphogluconolactonase, DevB-type Y89_1834 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase Y89_1834 IPR037171 Y89_1834 Y89_1835 IPR000887 KDPG/KHG aldolase Y89_1835 IPR013785 Aldolase-type TIM barrel Y89_1835 IPR031337 Y89_1835 Y89_1835 IPR031338 Y89_1835 Y89_1836 IPR000086 NUDIX hydrolase domain Y89_1836 IPR015797 NUDIX hydrolase domain-like Y89_1837 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Y89_1837 IPR002942 RNA-binding S4 domain Y89_1837 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Y89_1837 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Y89_1837 IPR020103 Pseudouridine synthase, catalytic domain Y89_1837 IPR036986 Y89_1837 Y89_1839 IPR000160 GGDEF domain Y89_1839 IPR029787 Nucleotide cyclase Y89_1840 IPR004445 Sodium/glutamate symporter Y89_1841 IPR005923 Formiminoglutamase Y89_1841 IPR006035 Ureohydrolase Y89_1841 IPR023696 Ureohydrolase domain Y89_1842 IPR005471 Transcription regulator IclR, N-terminal Y89_1842 IPR014757 Transcription regulator IclR, C-terminal Y89_1842 IPR029016 GAF domain-like Y89_1842 IPR036388 Y89_1842 Y89_1842 IPR036390 Y89_1842 Y89_1843 IPR002347 Glucose/ribitol dehydrogenase Y89_1843 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_1843 IPR036291 Y89_1843 Y89_1844 IPR006346 2-phosphoglycolate phosphatase, prokaryotic Y89_1844 IPR006439 HAD hydrolase, subfamily IA Y89_1844 IPR023198 Phosphoglycolate phosphatase, domain 2 Y89_1844 IPR023214 HAD-like domain Y89_1844 IPR036412 Y89_1844 Y89_1845 IPR010233 Ubiquinone biosynthesis O-methyltransferase Y89_1845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1846 IPR006680 Amidohydrolase 1 Y89_1846 IPR011059 Metal-dependent hydrolase, composite domain Y89_1846 IPR023512 5-methylthioadenosine/S-adenosylhomocysteine deaminase Y89_1846 IPR032466 Y89_1846 Y89_1847 IPR000649 Initiation factor 2B-related Y89_1847 IPR005251 Methylthioribose-1-phosphate isomerase Y89_1847 IPR011559 Initiation factor 2B alpha/beta/delta Y89_1847 IPR037171 Y89_1847 Y89_1848 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Y89_1848 IPR005743 DNA gyrase, subunit A Y89_1848 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel Y89_1848 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain Y89_1848 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Y89_1848 IPR013760 DNA topoisomerase, type IIA-like domain Y89_1848 IPR035516 Y89_1848 Y89_1849 IPR000192 Aminotransferase class V domain Y89_1849 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1849 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1849 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1849 IPR022278 Phosphoserine aminotransferase Y89_1850 IPR001086 Prephenate dehydratase Y89_1850 IPR002701 Chorismate mutase Y89_1850 IPR002912 ACT domain Y89_1850 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase Y89_1850 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain Y89_1850 IPR018528 Prephenate dehydratase, conserved site Y89_1850 IPR036263 Y89_1850 Y89_1850 IPR036979 Y89_1850 Y89_1851 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Y89_1851 IPR004839 Aminotransferase, class I/classII Y89_1851 IPR005861 Histidinol-phosphate aminotransferase family Y89_1851 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1851 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1851 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1852 IPR001986 Enolpyruvate transferase domain Y89_1852 IPR003099 Prephenate dehydrogenase Y89_1852 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase Y89_1852 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_1852 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Y89_1852 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site Y89_1852 IPR036291 Y89_1852 Y89_1852 IPR036968 Y89_1852 Y89_1853 IPR003136 Cytidylate kinase Y89_1853 IPR011994 Cytidylate kinase domain Y89_1853 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1854 IPR000110 Ribosomal protein S1 Y89_1854 IPR003029 Ribosomal protein S1, RNA-binding domain Y89_1854 IPR012340 Nucleic acid-binding, OB-fold Y89_1854 IPR022967 RNA-binding domain, S1 Y89_1855 IPR000119 Histone-like bacterial DNA-binding protein Y89_1855 IPR005685 Integration host factor, beta subunit Y89_1855 IPR010992 Integration host factor (IHF)-like DNA-binding domain Y89_1855 IPR020816 Histone-like DNA-binding protein, conserved site Y89_1856 IPR003856 Lipopolysaccharide biosynthesis Y89_1856 IPR032807 Y89_1856 Y89_1857 IPR016040 NAD(P)-binding domain Y89_1857 IPR026390 NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family Y89_1857 IPR036291 Y89_1857 Y89_1858 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Y89_1858 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1858 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1858 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1858 IPR026385 Aminotransferase, LLPSF_NHT_00031 family Y89_1859 IPR003331 UDP-N-acetylglucosamine 2-epimerase Y89_1859 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing Y89_1860 IPR013132 N-acetylneuraminic acid synthase, N-terminal Y89_1860 IPR013785 Aldolase-type TIM barrel Y89_1860 IPR013974 SAF domain Y89_1860 IPR020007 N-acetylneuraminate synthase Y89_1860 IPR036732 Y89_1860 Y89_1861 IPR001451 Bacterial transferase hexapeptide repeat Y89_1861 IPR011004 Trimeric LpxA-like Y89_1861 IPR018357 Hexapeptide transferase, conserved site Y89_1861 IPR020019 Sialic acid O-acyltransferase, NeuD Y89_1862 IPR000644 CBS domain Y89_1862 IPR005835 Nucleotidyl transferase Y89_1862 IPR029044 Nucleotide-diphospho-sugar transferases Y89_1863 IPR000683 Oxidoreductase, N-terminal Y89_1863 IPR004104 Oxidoreductase, C-terminal Y89_1863 IPR036291 Y89_1863 Y89_1864 IPR003329 Acylneuraminate cytidylyltransferase Y89_1864 IPR029044 Nucleotide-diphospho-sugar transferases Y89_1865 IPR002347 Glucose/ribitol dehydrogenase Y89_1865 IPR036291 Y89_1865 Y89_1869 IPR001962 Asparagine synthase Y89_1869 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_1869 IPR020022 N-acetyl sugar amidotransferase Y89_1870 IPR010139 Imidazole glycerol phosphate synthase, subunit H Y89_1870 IPR017926 Glutamine amidotransferase Y89_1870 IPR029062 Class I glutamine amidotransferase-like Y89_1871 IPR006062 Histidine biosynthesis Y89_1871 IPR011060 Ribulose-phosphate binding barrel Y89_1871 IPR013785 Aldolase-type TIM barrel Y89_1873 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Y89_1873 IPR011051 RmlC-like cupin domain Y89_1873 IPR014710 RmlC-like jelly roll fold Y89_1873 IPR036291 Y89_1873 Y89_1875 IPR001296 Glycosyl transferase, family 1 Y89_1877 IPR000715 Glycosyl transferase, family 4 Y89_1878 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Y89_1878 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1878 IPR036291 Y89_1878 Y89_1879 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Y89_1879 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Y89_1879 IPR010994 RuvA domain 2-like Y89_1880 IPR000796 Aspartate/other aminotransferase Y89_1880 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Y89_1880 IPR004839 Aminotransferase, class I/classII Y89_1880 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1880 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1880 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1881 IPR001650 Helicase, C-terminal Y89_1881 IPR001943 UVR domain Y89_1881 IPR004807 UvrABC system, subunit B Y89_1881 IPR006935 Helicase/UvrB domain Y89_1881 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_1881 IPR024759 UvrB, YAD/RRR-motif-containing domain Y89_1881 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1881 IPR036876 Y89_1881 Y89_1882 IPR004638 Drug resistance transporter EmrB/QacA subfamily Y89_1882 IPR011701 Major facilitator superfamily Y89_1882 IPR036259 Y89_1882 Y89_1883 IPR003997 RTX secretion protein D, Gram-negative bacteria Y89_1883 IPR006143 RND efflux pump, membrane fusion protein Y89_1883 IPR032317 Y89_1883 Y89_1884 IPR000847 Transcription regulator HTH, LysR Y89_1884 IPR005119 LysR, substrate-binding Y89_1884 IPR036388 Y89_1884 Y89_1884 IPR036390 Y89_1884 Y89_1885 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Y89_1885 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Y89_1885 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial Y89_1885 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding Y89_1885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_1885 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Y89_1885 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 Y89_1886 IPR001647 DNA-binding HTH domain, TetR-type Y89_1886 IPR009057 Homeodomain-like Y89_1886 IPR036271 Y89_1886 Y89_1887 IPR022742 Putative lysophospholipase Y89_1887 IPR029058 Alpha/Beta hydrolase fold Y89_1888 IPR000887 KDPG/KHG aldolase Y89_1888 IPR013785 Aldolase-type TIM barrel Y89_1888 IPR031337 Y89_1888 Y89_1889 IPR029069 HotDog domain Y89_1890 IPR001269 tRNA-dihydrouridine synthase Y89_1890 IPR013785 Aldolase-type TIM barrel Y89_1890 IPR018517 tRNA-dihydrouridine synthase, conserved site Y89_1890 IPR032886 Y89_1890 Y89_1891 IPR002347 Glucose/ribitol dehydrogenase Y89_1891 IPR036291 Y89_1891 Y89_1892 IPR000182 GNAT domain Y89_1892 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_1892 IPR016181 Acyl-CoA N-acyltransferase Y89_1892 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_1893 IPR002068 Alpha crystallin/Hsp20 domain Y89_1893 IPR008978 HSP20-like chaperone Y89_1894 IPR013830 Y89_1894 Y89_1894 IPR036514 Y89_1894 Y89_1895 IPR000847 Transcription regulator HTH, LysR Y89_1895 IPR005119 LysR, substrate-binding Y89_1895 IPR036388 Y89_1895 Y89_1895 IPR036390 Y89_1895 Y89_1896 IPR006175 YjgF/Yer057p/UK114 family Y89_1896 IPR035959 Y89_1896 Y89_1897 IPR000847 Transcription regulator HTH, LysR Y89_1897 IPR005119 LysR, substrate-binding Y89_1897 IPR036388 Y89_1897 Y89_1897 IPR036390 Y89_1897 Y89_1898 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Y89_1898 IPR004430 3-isopropylmalate dehydratase, large subunit Y89_1898 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Y89_1898 IPR018136 Aconitase family, 4Fe-4S cluster binding site Y89_1898 IPR036008 Y89_1898 Y89_1899 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel Y89_1899 IPR004431 3-isopropylmalate dehydratase, small subunit Y89_1899 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Y89_1900 IPR013216 Methyltransferase type 11 Y89_1900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1901 IPR004429 Isopropylmalate dehydrogenase Y89_1901 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Y89_1901 IPR024084 Isopropylmalate dehydrogenase-like domain Y89_1902 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site Y89_1902 IPR000534 Semialdehyde dehydrogenase, NAD-binding Y89_1902 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type Y89_1902 IPR012080 Aspartate-semialdehyde dehydrogenase Y89_1902 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Y89_1902 IPR036291 Y89_1902 Y89_1903 IPR000534 Semialdehyde dehydrogenase, NAD-binding Y89_1903 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Y89_1903 IPR036291 Y89_1903 Y89_1904 IPR011990 Tetratricopeptide-like helical domain Y89_1904 IPR018392 LysM domain Y89_1904 IPR020011 Motility protein FimV, C-terminal Y89_1904 IPR020012 Motility protein FimV, N-terminal Y89_1904 IPR036779 Y89_1904 Y89_1904 IPR038440 Y89_1904 Y89_1905 IPR001406 Pseudouridine synthase I, TruA Y89_1905 IPR020095 Pseudouridine synthase I, TruA, C-terminal Y89_1905 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain Y89_1905 IPR020103 Pseudouridine synthase, catalytic domain Y89_1906 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain Y89_1906 IPR011060 Ribulose-phosphate binding barrel Y89_1906 IPR013785 Aldolase-type TIM barrel Y89_1907 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit Y89_1907 IPR029045 ClpP/crotonase-like domain Y89_1907 IPR034733 Y89_1907 Y89_1908 IPR001645 Folylpolyglutamate synthetase Y89_1908 IPR013221 Mur ligase, central Y89_1908 IPR036565 Y89_1908 Y89_1908 IPR036615 Y89_1908 Y89_1909 IPR007730 Sporulation-related domain Y89_1909 IPR036680 Y89_1909 Y89_1910 IPR003825 Colicin V production, CvpA Y89_1911 IPR000836 Phosphoribosyltransferase domain Y89_1911 IPR005854 Amidophosphoribosyl transferase Y89_1911 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_1911 IPR029057 Phosphoribosyltransferase-like Y89_1912 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Y89_1912 IPR006234 O-succinylhomoserine sulfhydrylase Y89_1912 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_1912 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_1912 IPR015424 Pyridoxal phosphate-dependent transferase Y89_1913 IPR002347 Glucose/ribitol dehydrogenase Y89_1913 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_1913 IPR036291 Y89_1913 Y89_1914 IPR001775 GspD/PilQ family Y89_1914 IPR004845 Type II secretion system GspD, conserved site Y89_1914 IPR004846 Type II/III secretion system Y89_1914 IPR005644 NolW-like Y89_1914 IPR013356 Type II secretion system GspD Y89_1914 IPR038591 Y89_1914 Y89_1915 IPR024961 Y89_1915 Y89_1916 IPR001482 Type II secretion system protein E Y89_1916 IPR013369 Type II secretion system GspE Y89_1916 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1916 IPR037257 Y89_1916 Y89_1917 IPR001992 Type II secretion system conserved site Y89_1917 IPR003004 GspF/PilC family Y89_1917 IPR011850 General secretion pathway protein F Y89_1917 IPR018076 Type II secretion system F domain Y89_1918 IPR000983 Bacterial general secretion pathway protein G-type pilin Y89_1918 IPR010054 General secretion pathway protein G Y89_1918 IPR012902 Prokaryotic N-terminal methylation site Y89_1918 IPR013545 Type II secretion system protein G Y89_1919 IPR002416 Type II secretion system protein H Y89_1919 IPR012902 Prokaryotic N-terminal methylation site Y89_1919 IPR022346 General secretion pathway, GspH Y89_1920 IPR003413 Type II secretion system protein I domain Y89_1920 IPR010052 Type II secretion system protein I Y89_1920 IPR012902 Prokaryotic N-terminal methylation site Y89_1921 IPR010055 Type II secretion system protein J Y89_1921 IPR012902 Prokaryotic N-terminal methylation site Y89_1922 IPR005628 General secretion pathway protein K Y89_1922 IPR038072 Y89_1922 Y89_1923 IPR007812 Type II secretion system protein L Y89_1923 IPR024230 GspL, cytoplasmic actin-ATPase-like domain Y89_1923 IPR025691 GspL periplasmic domain Y89_1924 IPR007690 Type II secretion system, protein M Y89_1924 IPR023229 Type II secretion system protein M, periplasmic domain Y89_1925 IPR009057 Homeodomain-like Y89_1925 IPR018060 DNA binding HTH domain, AraC-type Y89_1925 IPR020449 Transcription regulator HTH, AraC- type Y89_1925 IPR032687 Y89_1925 Y89_1926 IPR003010 Carbon-nitrogen hydrolase Y89_1926 IPR036526 Y89_1926 Y89_1927 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_1927 IPR013785 Aldolase-type TIM barrel Y89_1927 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_1927 IPR036188 Y89_1927 Y89_1929 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_1929 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Y89_1929 IPR036052 Y89_1929 Y89_1930 IPR015003 Protein of unknown function DUF1853 Y89_1931 IPR002504 Inorganic polyphosphate/ATP-NAD kinase Y89_1931 IPR016064 ATP-NAD kinase-like domain Y89_1931 IPR017437 ATP-NAD kinase, PpnK-type, all-beta Y89_1931 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 Y89_1932 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Y89_1932 IPR029052 Metallo-dependent phosphatase-like Y89_1933 IPR022764 Peptidase S54, rhomboid domain Y89_1933 IPR031976 Y89_1933 Y89_1933 IPR035952 Y89_1933 Y89_1933 IPR038244 Y89_1933 Y89_1934 IPR009749 Protein of unknown function DUF1315 Y89_1935 IPR021246 Protein of unknown function DUF2797 Y89_1936 IPR012779 Peptidase M1, alanyl aminopeptidase Y89_1936 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal Y89_1936 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Y89_1936 IPR027268 Y89_1936 Y89_1936 IPR035414 Y89_1936 Y89_1936 IPR037144 Y89_1936 Y89_1936 IPR038438 Y89_1936 Y89_1937 IPR010727 Protein of unknown function DUF1302 Y89_1938 IPR010752 Protein of unknown function DUF1329 Y89_1939 IPR002860 BNR repeat Y89_1939 IPR015943 WD40/YVTN repeat-like-containing domain Y89_1939 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain Y89_1940 IPR003392 Patched Y89_1940 IPR004869 Membrane transport protein, MMPL domain Y89_1941 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1941 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_1941 IPR036097 Y89_1941 Y89_1941 IPR036890 Y89_1941 Y89_1942 IPR001789 Signal transduction response regulator, receiver domain Y89_1942 IPR001867 Signal transduction response regulator, C-terminal Y89_1942 IPR011006 CheY-like superfamily Y89_1942 IPR036388 Y89_1942 Y89_1943 IPR017395 Chlorophyllase, chloroplast Y89_1943 IPR029058 Alpha/Beta hydrolase fold Y89_1944 IPR025738 Aerotolerance-related protein BatD Y89_1945 IPR001440 Tetratricopeptide TPR1 Y89_1945 IPR002035 von Willebrand factor, type A Y89_1945 IPR011990 Tetratricopeptide-like helical domain Y89_1945 IPR019734 Tetratricopeptide repeat Y89_1945 IPR036465 Y89_1945 Y89_1946 IPR002035 von Willebrand factor, type A Y89_1946 IPR036465 Y89_1946 Y89_1947 IPR025489 Protein of unknown function (DUF4381 Y89_1948 IPR002881 Domain of unknown function DUF58 Y89_1949 IPR011703 ATPase, AAA-3 Y89_1949 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_1951 IPR007780 Bacterial NAD-glutamate dehydrogenase Y89_1951 IPR028971 NAD-glutamate dehydrogenase Y89_1951 IPR036291 Y89_1951 Y89_1952 IPR000835 MarR-type HTH domain Y89_1952 IPR036388 Y89_1952 Y89_1952 IPR036390 Y89_1952 Y89_1953 IPR000868 Isochorismatase-like Y89_1953 IPR036380 Y89_1953 Y89_1955 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain Y89_1955 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Y89_1955 IPR013785 Aldolase-type TIM barrel Y89_1955 IPR016062 Hypothetical protein TM1410-related Y89_1955 IPR016925 Uncharacterised conserved protein UCP029570 Y89_1955 IPR017853 Glycoside hydrolase, superfamily Y89_1956 IPR011990 Tetratricopeptide-like helical domain Y89_1958 IPR003018 GAF domain Y89_1958 IPR029016 GAF domain-like Y89_1958 IPR031583 Y89_1958 Y89_1958 IPR038367 Y89_1958 Y89_1960 IPR022622 Domain of unknown function DUF3492 Y89_1961 IPR031617 Y89_1961 Y89_1963 IPR001387 Cro/C1-type helix-turn-helix domain Y89_1963 IPR010982 Lambda repressor-like, DNA-binding domain Y89_1964 IPR010982 Lambda repressor-like, DNA-binding domain Y89_1965 IPR000834 Peptidase M14, carboxypeptidase A Y89_1966 IPR000073 Alpha/beta hydrolase fold-1 Y89_1966 IPR000639 Epoxide hydrolase-like Y89_1966 IPR029058 Alpha/Beta hydrolase fold Y89_1968 IPR021363 Protein of unknown function DUF2835 Y89_1969 IPR001295 Dihydroorotate dehydrogenase, conserved site Y89_1969 IPR005719 Dihydroorotate dehydrogenase, class 2 Y89_1969 IPR005720 Dihydroorotate dehydrogenase domain Y89_1969 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 Y89_1969 IPR013785 Aldolase-type TIM barrel Y89_1970 IPR007040 Ribosome modulation factor Y89_1970 IPR023200 Ribosome modulation factor-like domain Y89_1971 IPR000241 Putative RNA methylase domain Y89_1971 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Y89_1971 IPR004114 THUMP Y89_1971 IPR017244 Ribosomal RNA large subunit methyltransferase K/L Y89_1971 IPR019614 S-adenosylmethionine-dependent methyltransferase Y89_1971 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_1972 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C Y89_1972 IPR012338 Beta-lactamase/transpeptidase-like Y89_1973 IPR007416 Protein of unknown function DUF469 Y89_1974 IPR000792 Transcription regulator LuxR, C-terminal Y89_1974 IPR001789 Signal transduction response regulator, receiver domain Y89_1974 IPR011006 CheY-like superfamily Y89_1975 IPR001789 Signal transduction response regulator, receiver domain Y89_1975 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_1975 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_1975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_1975 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_1975 IPR011006 CheY-like superfamily Y89_1975 IPR013656 PAS fold-4 Y89_1975 IPR035965 Y89_1975 Y89_1975 IPR036097 Y89_1975 Y89_1975 IPR036641 Y89_1975 Y89_1975 IPR036890 Y89_1975 Y89_1976 IPR003607 HD/PDEase domain Y89_1976 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase Y89_1976 IPR006674 HD domain Y89_1976 IPR023024 Deoxyguanosinetriphosphate triphosphohydrolase, type 3 Y89_1976 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain Y89_1976 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain Y89_1978 IPR009937 Protein of unknown function DUF1469 Y89_1979 IPR010279 Protein of unknown function DUF883, ElaB Y89_1980 IPR018047 Ammonium transporter, conserved site Y89_1980 IPR024041 Ammonium transporter AmtB-like domain Y89_1980 IPR029020 Ammonium/urea transporter Y89_1981 IPR005318 Outer membrane porin, bacterial Y89_1981 IPR023614 Porin domain Y89_1982 IPR001279 Beta-lactamase-like Y89_1982 IPR036866 Y89_1982 Y89_1983 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain Y89_1983 IPR012349 FMN-binding split barrel Y89_1984 IPR004045 Glutathione S-transferase, N-terminal Y89_1984 IPR004046 Glutathione S-transferase, C-terminal Y89_1984 IPR036249 Y89_1984 Y89_1984 IPR036282 Y89_1984 Y89_1985 IPR001647 DNA-binding HTH domain, TetR-type Y89_1985 IPR009057 Homeodomain-like Y89_1985 IPR036271 Y89_1985 Y89_1986 IPR008554 Glutaredoxin-like Y89_1986 IPR036249 Y89_1986 Y89_1987 IPR036280 Y89_1987 Y89_1987 IPR036909 Y89_1987 Y89_1988 IPR010305 Protein of unknown function DUF903 Y89_1988 IPR010920 Like-Sm (LSM) domain Y89_1989 IPR013482 Molybdenum cofactor guanylyltransferase Y89_1989 IPR025877 MobA-like NTP transferase domain Y89_1989 IPR029044 Nucleotide-diphospho-sugar transferases Y89_1990 IPR001453 Molybdopterin binding domain Y89_1990 IPR008284 Molybdenum cofactor biosynthesis, conserved site Y89_1990 IPR012245 Molybdenum cofactor biosynthesis protein MoaB Y89_1990 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria Y89_1990 IPR036425 Y89_1990 Y89_1991 IPR001453 Molybdopterin binding domain Y89_1991 IPR005110 MoeA, N-terminal and linker domain Y89_1991 IPR005111 MoeA, C-terminal, domain IV Y89_1991 IPR008284 Molybdenum cofactor biosynthesis, conserved site Y89_1991 IPR036135 Y89_1991 Y89_1991 IPR036425 Y89_1991 Y89_1991 IPR036688 Y89_1991 Y89_1992 IPR009057 Homeodomain-like Y89_1992 IPR018060 DNA binding HTH domain, AraC-type Y89_1992 IPR020449 Transcription regulator HTH, AraC- type Y89_1992 IPR032687 Y89_1992 Y89_1993 IPR004113 FAD-linked oxidase, C-terminal Y89_1993 IPR006094 FAD linked oxidase, N-terminal Y89_1993 IPR016164 FAD-linked oxidase-like, C-terminal Y89_1993 IPR036318 Y89_1993 Y89_1994 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase Y89_1994 IPR006076 FAD dependent oxidoreductase Y89_1994 IPR031656 Y89_1994 Y89_1994 IPR036188 Y89_1994 Y89_1994 IPR038299 Y89_1994 Y89_1995 IPR000577 Y89_1995 Y89_1995 IPR018484 Carbohydrate kinase, FGGY, N-terminal Y89_1995 IPR018485 Carbohydrate kinase, FGGY, C-terminal Y89_1996 IPR001206 Diacylglycerol kinase, catalytic domain Y89_1996 IPR005218 Diacylglycerol/lipid kinase Y89_1996 IPR016064 ATP-NAD kinase-like domain Y89_1996 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 Y89_1996 IPR022433 Lipid kinase YegS Y89_1997 IPR005302 Molybdenum cofactor sulfurase, C-terminal Y89_1997 IPR005303 MOSC, N-terminal beta barrel Y89_1997 IPR011037 Pyruvate kinase-like, insert domain Y89_1998 IPR009739 Protein of unknown function DUF1311 Y89_1999 IPR008258 Lytic transglycosylase-like SLT domain Y89_1999 IPR008939 Lytic transglycosylase, superhelical U-shaped Y89_1999 IPR012289 Lytic transglycosylase, superhelical linker Y89_1999 IPR023346 Lysozyme-like domain Y89_2000 IPR003439 ABC transporter-like Y89_2000 IPR003593 AAA+ ATPase domain Y89_2000 IPR017871 ABC transporter, conserved site Y89_2000 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2000 IPR032524 Y89_2000 Y89_2000 IPR032781 Y89_2000 Y89_2000 IPR037118 Y89_2000 Y89_2002 IPR006015 Universal stress protein A Y89_2002 IPR006016 UspA Y89_2002 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_2005 IPR001753 Crotonase superfamily Y89_2005 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Y89_2005 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Y89_2005 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site Y89_2005 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_2005 IPR012799 Fatty oxidation complex, alpha subunit FadB Y89_2005 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Y89_2005 IPR029045 ClpP/crotonase-like domain Y89_2005 IPR036291 Y89_2005 Y89_2006 IPR002155 Thiolase Y89_2006 IPR012805 Acetyl-CoA C-acyltransferase FadA Y89_2006 IPR016039 Thiolase-like Y89_2006 IPR020613 Thiolase, conserved site Y89_2006 IPR020615 Thiolase, acyl-enzyme intermediate active site Y89_2006 IPR020616 Thiolase, N-terminal Y89_2006 IPR020617 Thiolase, C-terminal Y89_2007 IPR023387 DUF1653-like domain Y89_2007 IPR037135 Y89_2007 Y89_2008 IPR003601 DNA topoisomerase, type IA, domain 2 Y89_2008 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Y89_2008 IPR005733 DNA topoisomerase I, bacterial-type Y89_2008 IPR006171 Toprim domain Y89_2008 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type Y89_2008 IPR013497 DNA topoisomerase, type IA, central Y89_2008 IPR013498 DNA topoisomerase, type IA, zn finger Y89_2008 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Y89_2008 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Y89_2008 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Y89_2008 IPR023405 DNA topoisomerase, type IA, core domain Y89_2008 IPR023406 DNA topoisomerase, type IA, active site Y89_2008 IPR028612 DNA topoisomerase I, type IA Y89_2011 IPR004596 Cell division suppressor protein, SulA Y89_2011 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2012 IPR006197 Peptidase S24, LexA-like Y89_2012 IPR006199 LexA repressor, DNA-binding domain Y89_2012 IPR006200 LexA repressor Y89_2012 IPR015927 Peptidase S24/S26A/S26B/S26C Y89_2012 IPR036286 Y89_2012 Y89_2012 IPR036388 Y89_2012 Y89_2012 IPR036390 Y89_2012 Y89_2013 IPR001647 DNA-binding HTH domain, TetR-type Y89_2013 IPR009057 Homeodomain-like Y89_2013 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y89_2013 IPR036271 Y89_2013 Y89_2014 IPR001764 Glycoside hydrolase, family 3, N-terminal Y89_2014 IPR017853 Glycoside hydrolase, superfamily Y89_2014 IPR019800 Glycoside hydrolase, family 3, active site Y89_2014 IPR022956 Beta-hexosaminidase, bacterial Y89_2014 IPR036962 Y89_2014 Y89_2015 IPR000845 Nucleoside phosphorylase domain Y89_2015 IPR010044 Methylthioadenosine phosphorylase (MTAP) Y89_2015 IPR018099 Purine phosphorylase, family 2, conserved site Y89_2015 IPR035994 Y89_2015 Y89_2016 IPR021241 Protein of unknown function DUF2803 Y89_2017 IPR001650 Helicase, C-terminal Y89_2017 IPR003711 CarD-like/TRCF domain Y89_2017 IPR004576 Transcription-repair coupling factor Y89_2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain Y89_2017 IPR011545 DEAD/DEAH box helicase domain Y89_2017 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2017 IPR036101 Y89_2017 Y89_2017 IPR037235 Y89_2017 Y89_2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I Y89_2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain Y89_2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain Y89_2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site Y89_2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family Y89_2018 IPR036291 Y89_2018 Y89_2019 IPR002293 Amino acid/polyamine transporter I Y89_2019 IPR004840 Amino acid permease, conserved site Y89_2019 IPR004841 Amino acid permease/ SLC12A domain Y89_2020 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A Y89_2020 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal Y89_2021 IPR004338 NADH-quinone reductase NQR2/RnfD Y89_2021 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit Y89_2022 IPR007329 FMN-binding Y89_2022 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit Y89_2023 IPR003667 Electron transport complex, Rnf/Nqr Y89_2023 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit Y89_2024 IPR003667 Electron transport complex, Rnf/Nqr Y89_2024 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit Y89_2025 IPR001041 2Fe-2S ferredoxin-type domain Y89_2025 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_2025 IPR008333 Oxidoreductase, FAD-binding domain Y89_2025 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit Y89_2025 IPR012675 Beta-grasp domain Y89_2025 IPR017938 Riboflavin synthase-like beta-barrel Y89_2025 IPR036010 Y89_2025 Y89_2025 IPR039261 Y89_2025 Y89_2026 IPR003374 ApbE-like domain Y89_2026 IPR024932 Flavin transferase ApbE Y89_2027 IPR007495 Protein of unknown function DUF539 Y89_2028 IPR001100 Y89_2028 Y89_2028 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y89_2028 IPR016156 FAD/NAD-linked reductase, dimerisation domain Y89_2028 IPR022962 Soluble pyridine nucleotide transhydrogenase Y89_2028 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_2028 IPR036188 Y89_2028 Y89_2029 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Y89_2029 IPR030395 Y89_2029 Y89_2031 IPR009875 PilZ domain Y89_2032 IPR003838 Permease FtsX-like Y89_2032 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family Y89_2032 IPR025857 MacB-like periplasmic core domain Y89_2033 IPR003439 ABC transporter-like Y89_2033 IPR003593 AAA+ ATPase domain Y89_2033 IPR011924 Lipoprotein releasing system, ATP-binding protein Y89_2033 IPR017871 ABC transporter, conserved site Y89_2033 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2034 IPR003838 Permease FtsX-like Y89_2034 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family Y89_2034 IPR025857 MacB-like periplasmic core domain Y89_2035 IPR018639 Domain of unknown function DUF2062 Y89_2036 IPR001279 Beta-lactamase-like Y89_2036 IPR004477 ComEC/Rec2-related protein Y89_2036 IPR004797 Competence protein ComEC/Rec2 Y89_2036 IPR025405 Domain of unknown function DUF4131 Y89_2036 IPR036866 Y89_2036 Y89_2037 IPR002898 MotA/TolQ/ExbB proton channel Y89_2038 IPR003400 Biopolymer transport protein ExbD/TolR Y89_2039 IPR003758 Tetraacyldisaccharide 4'-kinase Y89_2039 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2040 IPR005651 Uncharacterised protein family UPF0434/Trm112 Y89_2040 IPR038053 Y89_2040 Y89_2041 IPR003329 Acylneuraminate cytidylyltransferase Y89_2041 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase Y89_2041 IPR029044 Nucleotide-diphospho-sugar transferases Y89_2042 IPR017867 Protein-tyrosine phosphatase, low molecular weight Y89_2042 IPR023485 Phosphotyrosine protein phosphatase I superfamily Y89_2042 IPR036196 Y89_2042 Y89_2043 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase Y89_2043 IPR006094 FAD linked oxidase, N-terminal Y89_2043 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal Y89_2043 IPR016167 FAD-binding, type 2, subdomain 1 Y89_2043 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_2043 IPR036318 Y89_2043 Y89_2043 IPR036635 Y89_2043 Y89_2044 IPR003029 Ribosomal protein S1, RNA-binding domain Y89_2044 IPR004659 Ribonuclease E/G Y89_2044 IPR012340 Nucleic acid-binding, OB-fold Y89_2044 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G Y89_2044 IPR022967 RNA-binding domain, S1 Y89_2044 IPR028878 Ribonuclease E Y89_2045 IPR002942 RNA-binding S4 domain Y89_2045 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Y89_2045 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Y89_2045 IPR006225 Pseudouridine synthase, RluC/RluD Y89_2045 IPR020103 Pseudouridine synthase, catalytic domain Y89_2045 IPR036986 Y89_2045 Y89_2046 IPR006439 HAD hydrolase, subfamily IA Y89_2046 IPR023198 Phosphoglycolate phosphatase, domain 2 Y89_2046 IPR023214 HAD-like domain Y89_2046 IPR036412 Y89_2046 Y89_2047 IPR002142 Peptidase S49 Y89_2047 IPR004635 Peptidase S49, SppA Y89_2047 IPR029045 ClpP/crotonase-like domain Y89_2048 IPR003697 Maf-like protein Y89_2048 IPR029001 Inosine triphosphate pyrophosphatase-like Y89_2049 IPR003772 Protein of unknown function DUF177 Y89_2050 IPR002677 Ribosomal protein L32p Y89_2050 IPR011332 Zinc-binding ribosomal protein Y89_2051 IPR003664 Fatty acid synthesis PlsX protein Y89_2051 IPR012281 Phospholipid biosynthesis protein, PlsX-like Y89_2052 IPR001227 Acyl transferase domain Y89_2052 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type Y89_2052 IPR014043 Acyl transferase Y89_2052 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Y89_2052 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Y89_2052 IPR020801 Polyketide synthase, acyl transferase domain Y89_2052 IPR024925 Malonyl CoA-acyl carrier protein transacylase Y89_2053 IPR002347 Glucose/ribitol dehydrogenase Y89_2053 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Y89_2053 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2053 IPR036291 Y89_2053 Y89_2054 IPR003231 Acyl carrier protein (ACP) Y89_2054 IPR006162 Phosphopantetheine attachment site Y89_2054 IPR009081 Acyl carrier protein-like Y89_2054 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Y89_2054 IPR036736 Y89_2054 Y89_2055 IPR014030 Beta-ketoacyl synthase, N-terminal Y89_2055 IPR014031 Beta-ketoacyl synthase, C-terminal Y89_2055 IPR016039 Thiolase-like Y89_2055 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 Y89_2055 IPR018201 Beta-ketoacyl synthase, active site Y89_2055 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Y89_2056 IPR001544 Aminotransferase, class IV Y89_2056 IPR017824 Aminodeoxychorismate lyase, class IV Y89_2056 IPR036038 Y89_2056 Y89_2057 IPR003770 Uncharacterised protein family UPF0755, YceG-like Y89_2058 IPR018094 Thymidylate kinase Y89_2058 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2058 IPR039430 Y89_2058 Y89_2059 IPR004622 DNA polymerase III, delta prime subunit Y89_2059 IPR015199 DNA polymerase III, delta subunit, C-terminal Y89_2059 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2060 IPR009875 PilZ domain Y89_2061 IPR001130 TatD family Y89_2061 IPR015991 Uncharacterised deoxyribonuclease TatD-type Y89_2061 IPR018228 Deoxyribonuclease, TatD-related, conserved site Y89_2061 IPR032466 Y89_2061 Y89_2062 IPR000192 Aminotransferase class V domain Y89_2062 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_2062 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_2062 IPR015424 Pyridoxal phosphate-dependent transferase Y89_2063 IPR001647 DNA-binding HTH domain, TetR-type Y89_2063 IPR009057 Homeodomain-like Y89_2063 IPR025996 WHG domain Y89_2063 IPR036271 Y89_2063 Y89_2064 IPR006638 Elongator protein 3/MiaB/NifB Y89_2064 IPR007197 Radical SAM Y89_2064 IPR013785 Aldolase-type TIM barrel Y89_2065 IPR032248 Y89_2065 Y89_2066 IPR010707 Protein of unknown function DUF1285 Y89_2066 IPR023361 Protein of unknown function DUF1285, beta-roll domain Y89_2067 IPR036188 Y89_2067 Y89_2068 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site Y89_2068 IPR012255 Electron transfer flavoprotein, beta subunit Y89_2068 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_2068 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Y89_2069 IPR001308 Electron transfer flavoprotein, alpha subunit Y89_2069 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_2069 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Y89_2069 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Y89_2069 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site Y89_2069 IPR029035 DHS-like NAD/FAD-binding domain Y89_2070 IPR010758 Trans-2-enoyl-CoA reductase Y89_2070 IPR024906 Enoyl reductase FAD binding domain Y89_2070 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative Y89_2071 IPR000073 Alpha/beta hydrolase fold-1 Y89_2071 IPR000639 Epoxide hydrolase-like Y89_2071 IPR029058 Alpha/Beta hydrolase fold Y89_2072 IPR000878 Tetrapyrrole methylase Y89_2072 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Y89_2072 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase Y89_2072 IPR014776 Tetrapyrrole methylase, subdomain 2 Y89_2072 IPR014777 Tetrapyrrole methylase, subdomain 1 Y89_2072 IPR035996 Y89_2072 Y89_2073 IPR002750 CobE/GbiG C-terminal domain Y89_2073 IPR036518 Y89_2073 Y89_2074 IPR012666 Cobalt transporter subunit CbtA, putative Y89_2075 IPR012667 Cobalt transporter subunit CbtB, putative Y89_2076 IPR003495 CobW/HypB/UreG domain Y89_2076 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Y89_2076 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW Y89_2076 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2076 IPR036627 Y89_2076 Y89_2077 IPR003672 CobN/magnesium chelatase Y89_2077 IPR011953 Cobaltochelatase, CobN subunit Y89_2078 IPR006218 DAHP synthetase I/KDSA Y89_2078 IPR006219 DHAP synthase, class 1 Y89_2078 IPR013785 Aldolase-type TIM barrel Y89_2080 IPR002035 von Willebrand factor, type A Y89_2080 IPR036465 Y89_2080 Y89_2081 IPR002155 Thiolase Y89_2081 IPR016039 Thiolase-like Y89_2081 IPR020613 Thiolase, conserved site Y89_2081 IPR020615 Thiolase, acyl-enzyme intermediate active site Y89_2081 IPR020616 Thiolase, N-terminal Y89_2081 IPR020617 Thiolase, C-terminal Y89_2082 IPR003137 Protease-associated domain, PA Y89_2082 IPR007484 Peptidase M28 Y89_2083 IPR006042 Xanthine/uracil permease Y89_2083 IPR006043 Xanthine/uracil/vitamin C permease Y89_2083 IPR017588 Xanthine permease Y89_2085 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Y89_2085 IPR016174 Di-haem cytochrome, transmembrane Y89_2088 IPR000073 Alpha/beta hydrolase fold-1 Y89_2088 IPR029058 Alpha/Beta hydrolase fold Y89_2089 IPR011701 Major facilitator superfamily Y89_2089 IPR036259 Y89_2089 Y89_2090 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_2090 IPR013785 Aldolase-type TIM barrel Y89_2091 IPR001647 DNA-binding HTH domain, TetR-type Y89_2091 IPR009057 Homeodomain-like Y89_2091 IPR036271 Y89_2091 Y89_2092 IPR000847 Transcription regulator HTH, LysR Y89_2092 IPR005119 LysR, substrate-binding Y89_2092 IPR036388 Y89_2092 Y89_2092 IPR036390 Y89_2092 Y89_2093 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_2095 IPR029058 Alpha/Beta hydrolase fold Y89_2096 IPR003439 ABC transporter-like Y89_2096 IPR003593 AAA+ ATPase domain Y89_2096 IPR017871 ABC transporter, conserved site Y89_2096 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2096 IPR030679 Y89_2096 Y89_2097 IPR000515 MetI-like domain Y89_2097 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_2097 IPR035906 Y89_2097 Y89_2098 IPR000515 MetI-like domain Y89_2098 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_2098 IPR035906 Y89_2098 Y89_2099 IPR001638 Extracellular solute-binding protein, family 3 Y89_2100 IPR002933 Peptidase M20 Y89_2100 IPR011650 Peptidase M20, dimerisation domain Y89_2100 IPR017439 Amidohydrolase Y89_2100 IPR036264 Y89_2100 Y89_2101 IPR000847 Transcription regulator HTH, LysR Y89_2101 IPR005119 LysR, substrate-binding Y89_2101 IPR036388 Y89_2101 Y89_2101 IPR036390 Y89_2101 Y89_2102 IPR003660 HAMP linker domain Y89_2102 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_2102 IPR004090 Chemotaxis methyl-accepting receptor Y89_2102 IPR024478 4HB MCP domain Y89_2104 IPR002347 Glucose/ribitol dehydrogenase Y89_2104 IPR036291 Y89_2104 Y89_2105 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_2105 IPR009057 Homeodomain-like Y89_2105 IPR018060 DNA binding HTH domain, AraC-type Y89_2105 IPR037923 Y89_2105 Y89_2106 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_2107 IPR001279 Beta-lactamase-like Y89_2107 IPR036866 Y89_2107 Y89_2108 IPR000522 ABC transporter, permease protein Y89_2108 IPR037294 Y89_2108 Y89_2109 IPR002491 ABC transporter periplasmic binding domain Y89_2110 IPR003439 ABC transporter-like Y89_2110 IPR003593 AAA+ ATPase domain Y89_2110 IPR017871 ABC transporter, conserved site Y89_2110 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2111 IPR000531 TonB-dependent receptor, beta-barrel Y89_2111 IPR010105 TonB-dependent siderophore receptor Y89_2111 IPR010917 TonB-dependent receptor, conserved site Y89_2111 IPR012910 TonB-dependent receptor, plug Y89_2111 IPR036942 Y89_2111 Y89_2111 IPR037066 Y89_2111 Y89_2112 IPR003810 Domain of unknown function DUF204 Y89_2112 IPR022929 Putative manganese efflux pump MntP Y89_2113 IPR003723 Precorrin-6x reductase Y89_2114 IPR002748 Cobalamin (vitamin B12) biosynthesis CbiD Y89_2114 IPR036074 Y89_2114 Y89_2115 IPR000878 Tetrapyrrole methylase Y89_2115 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase Y89_2115 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase Y89_2115 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit Y89_2115 IPR014777 Tetrapyrrole methylase, subdomain 1 Y89_2115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_2115 IPR035996 Y89_2115 Y89_2116 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Y89_2116 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Y89_2116 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like Y89_2116 IPR036136 Y89_2116 Y89_2117 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase Y89_2117 IPR036588 Y89_2117 Y89_2118 IPR000878 Tetrapyrrole methylase Y89_2118 IPR006364 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core Y89_2118 IPR012382 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase Y89_2118 IPR014776 Tetrapyrrole methylase, subdomain 2 Y89_2118 IPR014777 Tetrapyrrole methylase, subdomain 1 Y89_2118 IPR035996 Y89_2118 Y89_2119 IPR000878 Tetrapyrrole methylase Y89_2119 IPR006363 Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core Y89_2119 IPR014776 Tetrapyrrole methylase, subdomain 2 Y89_2119 IPR014777 Tetrapyrrole methylase, subdomain 1 Y89_2119 IPR021744 Cobalamin synthesis G, N-terminal Y89_2119 IPR035996 Y89_2119 Y89_2119 IPR038029 Y89_2119 Y89_2120 IPR001638 Extracellular solute-binding protein, family 3 Y89_2121 IPR025511 Domain of unknown function DUF4398 Y89_2122 IPR006664 Outer membrane protein, bacterial Y89_2122 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_2122 IPR025511 Domain of unknown function DUF4398 Y89_2122 IPR036737 Y89_2122 Y89_2123 IPR000792 Transcription regulator LuxR, C-terminal Y89_2123 IPR001789 Signal transduction response regulator, receiver domain Y89_2123 IPR011006 CheY-like superfamily Y89_2123 IPR016032 Signal transduction response regulator, C-terminal effector Y89_2125 IPR000524 Transcription regulator HTH, GntR Y89_2125 IPR004839 Aminotransferase, class I/classII Y89_2125 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_2125 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_2125 IPR015424 Pyridoxal phosphate-dependent transferase Y89_2125 IPR036388 Y89_2125 Y89_2125 IPR036390 Y89_2125 Y89_2126 IPR007627 RNA polymerase sigma-70 region 2 Y89_2126 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_2126 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_2126 IPR013325 RNA polymerase sigma factor, region 2 Y89_2126 IPR014284 RNA polymerase sigma-70 like domain Y89_2126 IPR036388 Y89_2126 Y89_2129 IPR000873 AMP-dependent synthetase/ligase Y89_2129 IPR020845 AMP-binding, conserved site Y89_2129 IPR025110 AMP-binding enzyme C-terminal domain Y89_2130 IPR002347 Glucose/ribitol dehydrogenase Y89_2130 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2130 IPR036291 Y89_2130 Y89_2131 IPR000089 Biotin/lipoyl attachment Y89_2131 IPR001882 Biotin-binding site Y89_2131 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Y89_2131 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal Y89_2131 IPR005482 Biotin carboxylase, C-terminal Y89_2131 IPR011053 Single hybrid motif Y89_2131 IPR011054 Rudiment single hybrid motif Y89_2131 IPR016185 Pre-ATP-grasp domain Y89_2132 IPR001753 Crotonase superfamily Y89_2132 IPR014748 Crontonase, C-terminal Y89_2132 IPR029045 ClpP/crotonase-like domain Y89_2133 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_2133 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2133 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_2133 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2133 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2133 IPR036250 Y89_2133 Y89_2133 IPR037069 Y89_2133 Y89_2134 IPR029045 ClpP/crotonase-like domain Y89_2134 IPR034733 Y89_2134 Y89_2135 IPR002347 Glucose/ribitol dehydrogenase Y89_2135 IPR036291 Y89_2135 Y89_2136 IPR010839 Protein of unknown function DUF1446 Y89_2137 IPR001647 DNA-binding HTH domain, TetR-type Y89_2137 IPR009057 Homeodomain-like Y89_2137 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y89_2137 IPR036271 Y89_2137 Y89_2138 IPR003675 CAAX amino terminal protease Y89_2139 IPR021550 Protein of unknown function DUF2897 Y89_2140 IPR000644 CBS domain Y89_2140 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_2140 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_2140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_2140 IPR036097 Y89_2140 Y89_2140 IPR036890 Y89_2140 Y89_2141 IPR001789 Signal transduction response regulator, receiver domain Y89_2141 IPR011006 CheY-like superfamily Y89_2142 IPR007896 Transmembrane pair, bacterial Y89_2143 IPR000847 Transcription regulator HTH, LysR Y89_2143 IPR005119 LysR, substrate-binding Y89_2143 IPR036388 Y89_2143 Y89_2143 IPR036390 Y89_2143 Y89_2144 IPR010323 Protein of unknown function DUF924 Y89_2144 IPR011990 Tetratricopeptide-like helical domain Y89_2145 IPR000847 Transcription regulator HTH, LysR Y89_2145 IPR005119 LysR, substrate-binding Y89_2145 IPR036388 Y89_2145 Y89_2145 IPR036390 Y89_2145 Y89_2146 IPR001754 Orotidine 5'-phosphate decarboxylase domain Y89_2146 IPR011060 Ribulose-phosphate binding barrel Y89_2146 IPR013785 Aldolase-type TIM barrel Y89_2146 IPR014732 Orotidine 5'-phosphate decarboxylase Y89_2146 IPR018089 Orotidine 5'-phosphate decarboxylase, active site Y89_2147 IPR011703 ATPase, AAA-3 Y89_2147 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2148 IPR002881 Domain of unknown function DUF58 Y89_2149 IPR002931 Transglutaminase-like Y89_2149 IPR021878 Protein of unknown function DUF3488 Y89_2149 IPR025403 Domain of unknown function DUF4129 Y89_2149 IPR038765 Y89_2149 Y89_2150 IPR007899 CHAD Y89_2150 IPR038186 Y89_2150 Y89_2151 IPR029069 HotDog domain Y89_2152 IPR000160 GGDEF domain Y89_2152 IPR029787 Nucleotide cyclase Y89_2153 IPR036374 Y89_2153 Y89_2154 IPR009305 Protein of unknown function DUF962 Y89_2155 IPR003660 HAMP linker domain Y89_2155 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_2156 IPR001130 TatD family Y89_2156 IPR018228 Deoxyribonuclease, TatD-related, conserved site Y89_2156 IPR032466 Y89_2156 Y89_2157 IPR001638 Extracellular solute-binding protein, family 3 Y89_2157 IPR008258 Lytic transglycosylase-like SLT domain Y89_2157 IPR023346 Lysozyme-like domain Y89_2158 IPR032808 Y89_2158 Y89_2159 IPR004961 Lipase chaperone Y89_2160 IPR000073 Alpha/beta hydrolase fold-1 Y89_2160 IPR029058 Alpha/Beta hydrolase fold Y89_2161 IPR004175 2',5' RNA ligase Y89_2161 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase Y89_2163 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Y89_2163 IPR006358 Transcription elongation factor GreB Y89_2163 IPR018151 Transcription elongation factor, GreA/GreB, conserved site Y89_2163 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal Y89_2163 IPR023459 Transcription elongation factor GreA/GreB family Y89_2163 IPR028624 Transcription elongation factor GreA/GreB Y89_2163 IPR036805 Y89_2163 Y89_2163 IPR036953 Y89_2163 Y89_2165 IPR003439 ABC transporter-like Y89_2165 IPR003593 AAA+ ATPase domain Y89_2165 IPR017871 ABC transporter, conserved site Y89_2165 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2166 IPR013830 Y89_2166 Y89_2166 IPR036514 Y89_2166 Y89_2168 IPR005490 L,D-transpeptidase catalytic domain Y89_2168 IPR038063 Y89_2168 Y89_2169 IPR016633 Uncharacterised conserved protein UCP015557 Y89_2170 IPR001059 Translation elongation factor P/YeiP, central Y89_2170 IPR008991 Translation protein SH3-like domain Y89_2170 IPR011768 Translation elongation factor P Y89_2170 IPR012340 Nucleic acid-binding, OB-fold Y89_2170 IPR013185 Translation elongation factor, KOW-like Y89_2170 IPR014722 Ribosomal protein L2 domain 2 Y89_2170 IPR015365 Elongation factor P, C-terminal Y89_2170 IPR020599 Translation elongation factor P/YeiP Y89_2171 IPR003718 OsmC/Ohr family Y89_2171 IPR015946 K homology domain-like, alpha/beta Y89_2171 IPR019953 Organic hydroperoxide resistance protein famiy Y89_2171 IPR036102 Y89_2171 Y89_2172 IPR000835 MarR-type HTH domain Y89_2172 IPR036388 Y89_2172 Y89_2172 IPR036390 Y89_2172 Y89_2173 IPR000847 Transcription regulator HTH, LysR Y89_2173 IPR005119 LysR, substrate-binding Y89_2173 IPR036388 Y89_2173 Y89_2173 IPR036390 Y89_2173 Y89_2174 IPR002781 Transmembrane protein TauE like Y89_2175 IPR000847 Transcription regulator HTH, LysR Y89_2175 IPR005119 LysR, substrate-binding Y89_2175 IPR036388 Y89_2175 Y89_2175 IPR036390 Y89_2175 Y89_2176 IPR009506 Protein of unknown function DUF1127 Y89_2177 IPR009351 Protein of unknown function DUF1006 Y89_2178 IPR002480 DAHP synthetase, class II Y89_2178 IPR013785 Aldolase-type TIM barrel Y89_2179 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_2180 IPR001753 Crotonase superfamily Y89_2180 IPR014748 Crontonase, C-terminal Y89_2180 IPR029045 ClpP/crotonase-like domain Y89_2181 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site Y89_2181 IPR001650 Helicase, C-terminal Y89_2181 IPR005580 DbpA, RNA-binding Y89_2181 IPR011545 DEAD/DEAH box helicase domain Y89_2181 IPR012677 Nucleotide-binding, alpha-beta plait Y89_2181 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_2181 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2181 IPR028618 ATP-dependent RNA helicase DeaD Y89_2182 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B Y89_2182 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type Y89_2183 IPR000847 Transcription regulator HTH, LysR Y89_2183 IPR005119 LysR, substrate-binding Y89_2183 IPR036388 Y89_2183 Y89_2183 IPR036390 Y89_2183 Y89_2184 IPR003423 Outer membrane efflux protein Y89_2184 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_2185 IPR003997 RTX secretion protein D, Gram-negative bacteria Y89_2185 IPR006143 RND efflux pump, membrane fusion protein Y89_2185 IPR032317 Y89_2185 Y89_2186 IPR011701 Major facilitator superfamily Y89_2186 IPR036259 Y89_2186 Y89_2187 IPR000847 Transcription regulator HTH, LysR Y89_2187 IPR005119 LysR, substrate-binding Y89_2187 IPR036388 Y89_2187 Y89_2187 IPR036390 Y89_2187 Y89_2188 IPR006015 Universal stress protein A Y89_2188 IPR006016 UspA Y89_2188 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_2189 IPR008854 TPMT family Y89_2189 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification Y89_2189 IPR025835 Thiopurine S-methyltransferase Y89_2189 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_2190 IPR000834 Peptidase M14, carboxypeptidase A Y89_2191 IPR001915 Peptidase M48 Y89_2191 IPR022919 Peptidase M48, protease HtpX, putative Y89_2193 IPR004839 Aminotransferase, class I/classII Y89_2193 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_2193 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_2193 IPR015424 Pyridoxal phosphate-dependent transferase Y89_2194 IPR002579 Peptide methionine sulphoxide reductase MrsB Y89_2194 IPR011057 Mss4-like Y89_2195 IPR000889 Glutathione peroxidase Y89_2195 IPR029759 Glutathione peroxidase active site Y89_2195 IPR029760 Glutathione peroxidase conserved site Y89_2195 IPR036249 Y89_2195 Y89_2196 IPR000835 MarR-type HTH domain Y89_2196 IPR036388 Y89_2196 Y89_2196 IPR036390 Y89_2196 Y89_2197 IPR001789 Signal transduction response regulator, receiver domain Y89_2197 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_2197 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_2197 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_2197 IPR011006 CheY-like superfamily Y89_2197 IPR036097 Y89_2197 Y89_2197 IPR036890 Y89_2197 Y89_2198 IPR008533 Domain of unknown function DUF815 Y89_2198 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2199 IPR000614 Free Met sulfoxide reductase conserved site Y89_2199 IPR003018 GAF domain Y89_2199 IPR029016 GAF domain-like Y89_2200 IPR004045 Glutathione S-transferase, N-terminal Y89_2200 IPR004046 Glutathione S-transferase, C-terminal Y89_2200 IPR036249 Y89_2200 Y89_2200 IPR036282 Y89_2200 Y89_2202 IPR021070 Killing trait, RebB Y89_2203 IPR021070 Killing trait, RebB Y89_2209 IPR021070 Killing trait, RebB Y89_2210 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_2210 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_2210 IPR013325 RNA polymerase sigma factor, region 2 Y89_2210 IPR014284 RNA polymerase sigma-70 like domain Y89_2210 IPR036388 Y89_2210 Y89_2211 IPR000595 Cyclic nucleotide-binding domain Y89_2211 IPR012318 Helix-turn-helix motif, Crp-type Y89_2211 IPR014710 RmlC-like jelly roll fold Y89_2211 IPR018490 Cyclic nucleotide-binding-like Y89_2211 IPR036388 Y89_2211 Y89_2211 IPR036390 Y89_2211 Y89_2214 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2214 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_2214 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2214 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2214 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type Y89_2214 IPR036250 Y89_2214 Y89_2214 IPR037069 Y89_2214 Y89_2215 IPR002931 Transglutaminase-like Y89_2215 IPR038765 Y89_2215 Y89_2216 IPR004045 Glutathione S-transferase, N-terminal Y89_2216 IPR004046 Glutathione S-transferase, C-terminal Y89_2216 IPR036249 Y89_2216 Y89_2216 IPR036282 Y89_2216 Y89_2217 IPR003439 ABC transporter-like Y89_2217 IPR003593 AAA+ ATPase domain Y89_2217 IPR017871 ABC transporter, conserved site Y89_2217 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2218 IPR000412 ABC-2 transporter Y89_2218 IPR013525 ABC-2 type transporter Y89_2219 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_2219 IPR003660 HAMP linker domain Y89_2219 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_2219 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_2219 IPR006290 Heavy metal sensor kinase Y89_2219 IPR036097 Y89_2219 Y89_2219 IPR036890 Y89_2219 Y89_2220 IPR001789 Signal transduction response regulator, receiver domain Y89_2220 IPR001867 Signal transduction response regulator, C-terminal Y89_2220 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response Y89_2220 IPR011006 CheY-like superfamily Y89_2220 IPR036388 Y89_2220 Y89_2222 IPR000923 Blue (type 1) copper domain Y89_2222 IPR008972 Cupredoxin Y89_2223 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 Y89_2223 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal Y89_2223 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF Y89_2224 IPR025516 Protein of unknown function DUF4404 Y89_2225 IPR006674 HD domain Y89_2225 IPR017670 Phosphonate degradation operon associated HDIG domain protein Y89_2226 IPR036412 Y89_2226 Y89_2227 IPR000524 Transcription regulator HTH, GntR Y89_2227 IPR011663 UbiC transcription regulator-associated Y89_2227 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Y89_2227 IPR036388 Y89_2227 Y89_2227 IPR036390 Y89_2227 Y89_2228 IPR029069 HotDog domain Y89_2229 IPR007428 VacJ-like lipoprotein Y89_2230 IPR009875 PilZ domain Y89_2231 IPR001789 Signal transduction response regulator, receiver domain Y89_2231 IPR001932 Protein phosphatase 2C (PP2C)-like domain Y89_2231 IPR011006 CheY-like superfamily Y89_2231 IPR036457 Y89_2231 Y89_2232 IPR002645 STAS domain Y89_2232 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type Y89_2232 IPR036513 Y89_2232 Y89_2233 IPR001585 Transaldolase Y89_2233 IPR004730 Transaldolase type 1 Y89_2233 IPR013785 Aldolase-type TIM barrel Y89_2233 IPR018225 Transaldolase, active site Y89_2234 IPR001269 tRNA-dihydrouridine synthase Y89_2234 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN Y89_2234 IPR013785 Aldolase-type TIM barrel Y89_2234 IPR018517 tRNA-dihydrouridine synthase, conserved site Y89_2235 IPR011040 Sialidases Y89_2235 IPR013783 Immunoglobulin-like fold Y89_2235 IPR036278 Y89_2235 Y89_2242 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_2242 IPR029095 NarX-like, N-terminal Y89_2243 IPR002933 Peptidase M20 Y89_2243 IPR011650 Peptidase M20, dimerisation domain Y89_2243 IPR017150 Peptidase M20, glutamate carboxypeptidase Y89_2243 IPR036264 Y89_2243 Y89_2244 IPR003018 GAF domain Y89_2244 IPR029016 GAF domain-like Y89_2245 IPR001387 Cro/C1-type helix-turn-helix domain Y89_2245 IPR010982 Lambda repressor-like, DNA-binding domain Y89_2246 IPR021354 Protein of unknown function DUF2975 Y89_2247 IPR003305 Carbohydrate-binding, CenC-like Y89_2247 IPR008979 Galactose-binding domain-like Y89_2247 IPR024079 Metallopeptidase, catalytic domain Y89_2250 IPR001387 Cro/C1-type helix-turn-helix domain Y89_2250 IPR010982 Lambda repressor-like, DNA-binding domain Y89_2251 IPR016924 Uncharacterised conserved protein UCP029543 Y89_2252 IPR011990 Tetratricopeptide-like helical domain Y89_2252 IPR039564 Y89_2252 Y89_2253 IPR000292 Formate/nitrite transporter Y89_2253 IPR023271 Aquaporin-like Y89_2254 IPR006076 FAD dependent oxidoreductase Y89_2254 IPR036188 Y89_2254 Y89_2255 IPR021994 Protein of unknown function DUF3592 Y89_2260 IPR000160 GGDEF domain Y89_2260 IPR003018 GAF domain Y89_2260 IPR029016 GAF domain-like Y89_2260 IPR029787 Nucleotide cyclase Y89_2262 IPR003719 Phenazine biosynthesis PhzF protein Y89_2263 IPR000086 NUDIX hydrolase domain Y89_2263 IPR015797 NUDIX hydrolase domain-like Y89_2263 IPR020084 NUDIX hydrolase, conserved site Y89_2263 IPR020476 NUDIX hydrolase Y89_2265 IPR001753 Crotonase superfamily Y89_2265 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Y89_2265 IPR029045 ClpP/crotonase-like domain Y89_2266 IPR001647 DNA-binding HTH domain, TetR-type Y89_2266 IPR009057 Homeodomain-like Y89_2266 IPR036271 Y89_2266 Y89_2268 IPR006314 Dyp-type peroxidase Y89_2268 IPR011008 Dimeric alpha-beta barrel Y89_2269 IPR000073 Alpha/beta hydrolase fold-1 Y89_2269 IPR029058 Alpha/Beta hydrolase fold Y89_2273 IPR008579 Domain of unknown function DUF861, cupin-3 Y89_2273 IPR011051 RmlC-like cupin domain Y89_2273 IPR014710 RmlC-like jelly roll fold Y89_2275 IPR005318 Outer membrane porin, bacterial Y89_2275 IPR023614 Porin domain Y89_2277 IPR000847 Transcription regulator HTH, LysR Y89_2277 IPR005119 LysR, substrate-binding Y89_2277 IPR036388 Y89_2277 Y89_2277 IPR036390 Y89_2277 Y89_2278 IPR007896 Transmembrane pair, bacterial Y89_2280 IPR005658 Proteinase inhibitor I11, ecotin Y89_2280 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria Y89_2280 IPR027438 Ecotin, C-terminal Y89_2280 IPR036198 Y89_2280 Y89_2281 IPR021250 Protein of unknown function DUF2789 Y89_2283 IPR010279 Protein of unknown function DUF883, ElaB Y89_2284 IPR032024 Y89_2284 Y89_2285 IPR020143 Uncharacterised protein family, RP436 Y89_2285 IPR032816 Y89_2285 Y89_2287 IPR017039 Virulence factor BrkB Y89_2288 IPR021898 Protein of unknown function DUF3509 Y89_2290 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Y89_2290 IPR035437 Y89_2290 Y89_2291 IPR007346 Endonuclease I Y89_2292 IPR021831 Protein of unknown function DUF3423 Y89_2293 IPR000994 Peptidase M24, structural domain Y89_2293 IPR001714 Peptidase M24, methionine aminopeptidase Y89_2293 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 Y89_2293 IPR036005 Y89_2293 Y89_2295 IPR021898 Protein of unknown function DUF3509 Y89_2299 IPR000073 Alpha/beta hydrolase fold-1 Y89_2299 IPR029058 Alpha/Beta hydrolase fold Y89_2300 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain Y89_2300 IPR002320 Threonine-tRNA ligase, class IIa Y89_2300 IPR004095 TGS Y89_2300 IPR004154 Anticodon-binding Y89_2300 IPR012675 Beta-grasp domain Y89_2300 IPR012676 TGS-like Y89_2300 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Y89_2300 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain Y89_2300 IPR036621 Y89_2300 Y89_2301 IPR001288 Translation initiation factor 3 Y89_2301 IPR019814 Translation initiation factor 3, N-terminal Y89_2301 IPR019815 Translation initiation factor 3, C-terminal Y89_2301 IPR036787 Y89_2301 Y89_2301 IPR036788 Y89_2301 Y89_2302 IPR001706 Ribosomal protein L35, non-mitochondrial Y89_2302 IPR018265 Ribosomal protein L35, conserved site Y89_2302 IPR021137 Ribosomal protein L35 Y89_2302 IPR037229 Y89_2302 Y89_2303 IPR005813 Ribosomal protein L20 Y89_2303 IPR035566 Y89_2303 Y89_2304 IPR002319 Phenylalanyl-tRNA synthetase Y89_2304 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal Y89_2304 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit Y89_2304 IPR010978 tRNA-binding arm Y89_2304 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial Y89_2305 IPR002547 tRNA-binding domain Y89_2305 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit Y89_2305 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding Y89_2305 IPR005146 B3/B4 tRNA-binding domain Y89_2305 IPR005147 tRNA synthetase, B5-domain Y89_2305 IPR009061 DNA binding domain, putative Y89_2305 IPR012340 Nucleic acid-binding, OB-fold Y89_2305 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Y89_2305 IPR036690 Y89_2305 Y89_2306 IPR000119 Histone-like bacterial DNA-binding protein Y89_2306 IPR005684 Integration host factor, alpha subunit Y89_2306 IPR010992 Integration host factor (IHF)-like DNA-binding domain Y89_2306 IPR020816 Histone-like DNA-binding protein, conserved site Y89_2307 IPR000551 MerR-type HTH domain Y89_2307 IPR009061 DNA binding domain, putative Y89_2308 IPR002104 Integrase, catalytic Y89_2308 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_2308 IPR013762 Integrase-like, catalytic core Y89_2311 IPR001405 RadC protein Y89_2311 IPR020891 Uncharacterised protein family UPF0758, conserved site Y89_2311 IPR025657 RadC-like JAB domain Y89_2314 IPR026325 Protein of unknown function DUF932 Y89_2315 IPR003115 ParB/Sulfiredoxin Y89_2315 IPR036086 Y89_2315 Y89_2317 IPR001387 Cro/C1-type helix-turn-helix domain Y89_2317 IPR010982 Lambda repressor-like, DNA-binding domain Y89_2318 IPR021341 Protein of unknown function DUF2958 Y89_2319 IPR018754 Protein of unknown function DUF2285 Y89_2320 IPR009061 DNA binding domain, putative Y89_2321 IPR018777 Replication initiator protein A Y89_2322 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Y89_2322 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2323 IPR010985 Ribbon-helix-helix Y89_2324 IPR021263 Protein of unknown function DUF2840 Y89_2325 IPR019533 Peptidase S26 Y89_2325 IPR036286 Y89_2325 Y89_2326 IPR021795 Protein of unknown function DUF3363 Y89_2327 IPR000847 Transcription regulator HTH, LysR Y89_2327 IPR005119 LysR, substrate-binding Y89_2327 IPR036388 Y89_2327 Y89_2327 IPR036390 Y89_2327 Y89_2328 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Y89_2328 IPR036291 Y89_2328 Y89_2329 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Y89_2329 IPR036291 Y89_2329 Y89_2330 IPR002347 Glucose/ribitol dehydrogenase Y89_2330 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2330 IPR036291 Y89_2330 Y89_2331 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Y89_2331 IPR036291 Y89_2331 Y89_2332 IPR002347 Glucose/ribitol dehydrogenase Y89_2332 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2332 IPR036291 Y89_2332 Y89_2333 IPR000847 Transcription regulator HTH, LysR Y89_2333 IPR005119 LysR, substrate-binding Y89_2333 IPR036388 Y89_2333 Y89_2333 IPR036390 Y89_2333 Y89_2335 IPR003688 Ti-type conjugative transfer system, TraG-like Y89_2335 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2336 IPR002145 Ribbon-helix-helix protein, copG Y89_2336 IPR010985 Ribbon-helix-helix Y89_2337 IPR001482 Type II secretion system protein E Y89_2337 IPR014149 Conjugative transfer, TrbB Y89_2337 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2338 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 Y89_2339 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Y89_2339 IPR016704 Conjugal transfer, TrbD Y89_2340 IPR003593 AAA+ ATPase domain Y89_2340 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain Y89_2340 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2341 IPR014147 Type IV conjugative transfer protein TrbJ Y89_2342 IPR007688 Conjugal transfer, TrbL/VirB6 Y89_2342 IPR014150 Conjugal transfer, TrbL Y89_2343 IPR007430 Bacterial virulence protein VirB8 Y89_2343 IPR032710 Y89_2343 Y89_2344 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Y89_2344 IPR014142 P-type conjugative transfer protein TrbG Y89_2344 IPR038161 Y89_2344 Y89_2345 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Y89_2346 IPR017601 DGQHR-containing domain Y89_2346 IPR017642 DNA sulphur modification protein DndB Y89_2347 IPR002500 Phosphoadenosine phosphosulphate reductase Y89_2347 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_2347 IPR017598 Sulphur transferase DndC, putative Y89_2348 IPR017599 DNA sulphur modification protein DndD Y89_2348 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2348 IPR038729 Y89_2348 Y89_2349 IPR002711 HNH endonuclease Y89_2351 IPR017601 DGQHR-containing domain Y89_2351 IPR017642 DNA sulphur modification protein DndB Y89_2353 IPR010982 Lambda repressor-like, DNA-binding domain Y89_2354 IPR003593 AAA+ ATPase domain Y89_2354 IPR018647 Domain of unknown function DUF2075 Y89_2354 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2355 IPR025984 MazG-like domain Y89_2356 IPR014944 Toxin SymE-like Y89_2358 IPR000719 Protein kinase domain Y89_2358 IPR011009 Protein kinase-like domain Y89_2358 IPR025103 Protein of unknown function DUF4011 Y89_2358 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2359 IPR013785 Aldolase-type TIM barrel Y89_2363 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V Y89_2363 IPR011057 Mss4-like Y89_2364 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase Y89_2364 IPR028973 3-demethylubiquinone-9 3-methyltransferase Y89_2364 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_2365 IPR007627 RNA polymerase sigma-70 region 2 Y89_2365 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_2365 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_2365 IPR013325 RNA polymerase sigma factor, region 2 Y89_2365 IPR014284 RNA polymerase sigma-70 like domain Y89_2365 IPR036388 Y89_2365 Y89_2366 IPR006860 FecR protein Y89_2366 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_2366 IPR032623 Y89_2366 Y89_2368 IPR002818 ThiJ/PfpI Y89_2368 IPR029062 Class I glutamine amidotransferase-like Y89_2369 IPR000551 MerR-type HTH domain Y89_2369 IPR009061 DNA binding domain, putative Y89_2370 IPR000073 Alpha/beta hydrolase fold-1 Y89_2370 IPR029058 Alpha/Beta hydrolase fold Y89_2371 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_2371 IPR013785 Aldolase-type TIM barrel Y89_2372 IPR000813 7Fe ferredoxin Y89_2372 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_2372 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_2372 IPR022569 Ferredoxin, C-terminal Y89_2373 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site Y89_2373 IPR006656 Molybdopterin oxidoreductase Y89_2373 IPR006657 Molydopterin dinucleotide-binding domain Y89_2373 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Y89_2373 IPR009010 Aspartate decarboxylase-like domain Y89_2374 IPR002577 Helix-turn-helix, HxlR type Y89_2374 IPR036388 Y89_2374 Y89_2374 IPR036390 Y89_2374 Y89_2375 IPR000620 Drug/metabolite transporter Y89_2376 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Y89_2376 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_2377 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_2378 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Y89_2378 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_2378 IPR005856 Cysteine synthase K/M Y89_2378 IPR005859 Cysteine synthase A Y89_2378 IPR036052 Y89_2378 Y89_2379 IPR008023 Protein of unknown function DUF748 Y89_2380 IPR003593 AAA+ ATPase domain Y89_2380 IPR003959 ATPase, AAA-type, core Y89_2380 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2381 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V Y89_2381 IPR011057 Mss4-like Y89_2382 IPR008912 Uncharacterised protein family CoxE-like Y89_2383 IPR009057 Homeodomain-like Y89_2383 IPR018060 DNA binding HTH domain, AraC-type Y89_2383 IPR032687 Y89_2383 Y89_2386 IPR010290 Transmembrane secretion effector Y89_2386 IPR036259 Y89_2386 Y89_2387 IPR005318 Outer membrane porin, bacterial Y89_2387 IPR023614 Porin domain Y89_2388 IPR011059 Metal-dependent hydrolase, composite domain Y89_2388 IPR013108 Amidohydrolase 3 Y89_2388 IPR032466 Y89_2388 Y89_2389 IPR000868 Isochorismatase-like Y89_2389 IPR036380 Y89_2389 Y89_2390 IPR009872 Protein of unknown function DUF1427 Y89_2390 IPR020017 XapX domain Y89_2391 IPR009057 Homeodomain-like Y89_2391 IPR018060 DNA binding HTH domain, AraC-type Y89_2391 IPR018062 HTH domain AraC-type, conserved site Y89_2392 IPR011673 Protein of unknown function DUF1615 Y89_2393 IPR013766 Thioredoxin domain Y89_2393 IPR036249 Y89_2393 Y89_2394 IPR006683 Thioesterase superfamily Y89_2394 IPR029069 HotDog domain Y89_2395 IPR000944 Transcription regulator Rrf2-like Y89_2395 IPR030489 Y89_2395 Y89_2395 IPR036388 Y89_2395 Y89_2395 IPR036390 Y89_2395 Y89_2396 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_2396 IPR036188 Y89_2396 Y89_2397 IPR000801 Putative esterase Y89_2397 IPR029058 Alpha/Beta hydrolase fold Y89_2398 IPR000531 TonB-dependent receptor, beta-barrel Y89_2398 IPR010105 TonB-dependent siderophore receptor Y89_2398 IPR010917 TonB-dependent receptor, conserved site Y89_2398 IPR012910 TonB-dependent receptor, plug Y89_2398 IPR036942 Y89_2398 Y89_2398 IPR037066 Y89_2398 Y89_2399 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_2399 IPR003660 HAMP linker domain Y89_2399 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_2399 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_2399 IPR031930 Y89_2399 Y89_2399 IPR036097 Y89_2399 Y89_2399 IPR036890 Y89_2399 Y89_2399 IPR038428 Y89_2399 Y89_2400 IPR001789 Signal transduction response regulator, receiver domain Y89_2400 IPR001867 Signal transduction response regulator, C-terminal Y89_2400 IPR011006 CheY-like superfamily Y89_2400 IPR036388 Y89_2400 Y89_2401 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Y89_2401 IPR010609 Gp5, C-terminal Y89_2401 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Y89_2401 IPR037026 Y89_2401 Y89_2402 IPR001826 RHS protein Y89_2402 IPR006530 YD repeat Y89_2402 IPR022385 Rhs repeat-associated core Y89_2402 IPR031325 Y89_2402 Y89_2404 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_2404 IPR036052 Y89_2404 Y89_2405 IPR002925 Dienelactone hydrolase Y89_2405 IPR029058 Alpha/Beta hydrolase fold Y89_2405 IPR032710 Y89_2405 Y89_2405 IPR037401 Y89_2405 Y89_2406 IPR000847 Transcription regulator HTH, LysR Y89_2406 IPR005119 LysR, substrate-binding Y89_2406 IPR036388 Y89_2406 Y89_2406 IPR036390 Y89_2406 Y89_2407 IPR011032 GroES (chaperonin 10)-like Y89_2407 IPR013149 Alcohol dehydrogenase, C-terminal Y89_2407 IPR013154 Alcohol dehydrogenase GroES-like Y89_2407 IPR020843 Polyketide synthase, enoylreductase Y89_2407 IPR036291 Y89_2407 Y89_2408 IPR013216 Methyltransferase type 11 Y89_2408 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_2409 IPR000412 ABC-2 transporter Y89_2409 IPR013525 ABC-2 type transporter Y89_2410 IPR001482 Type II secretion system protein E Y89_2410 IPR003593 AAA+ ATPase domain Y89_2410 IPR007831 General secretory system II, protein E, N-terminal Y89_2410 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2410 IPR037257 Y89_2410 Y89_2411 IPR003004 GspF/PilC family Y89_2411 IPR018076 Type II secretion system F domain Y89_2412 IPR000983 Bacterial general secretion pathway protein G-type pilin Y89_2412 IPR010054 General secretion pathway protein G Y89_2412 IPR012902 Prokaryotic N-terminal methylation site Y89_2412 IPR013545 Type II secretion system protein G Y89_2413 IPR012902 Prokaryotic N-terminal methylation site Y89_2415 IPR012902 Prokaryotic N-terminal methylation site Y89_2416 IPR005628 General secretion pathway protein K Y89_2418 IPR034756 Y89_2418 Y89_2420 IPR001801 Histone-like protein H-NS Y89_2421 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Y89_2421 IPR038418 Y89_2421 Y89_2422 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_2422 IPR002197 DNA binding HTH domain, Fis-type Y89_2422 IPR003018 GAF domain Y89_2422 IPR003593 AAA+ ATPase domain Y89_2422 IPR009057 Homeodomain-like Y89_2422 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_2422 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_2422 IPR025944 Sigma-54 interaction domain, conserved site Y89_2422 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2422 IPR029016 GAF domain-like Y89_2423 IPR000971 Globin Y89_2423 IPR001221 Phenol hydroxylase reductase Y89_2423 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_2423 IPR008333 Oxidoreductase, FAD-binding domain Y89_2423 IPR009050 Globin-like Y89_2423 IPR012292 Globin, structural domain Y89_2423 IPR017938 Riboflavin synthase-like beta-barrel Y89_2423 IPR023950 Flavohemoprotein Y89_2423 IPR039261 Y89_2423 Y89_2425 IPR010266 NnrS Y89_2426 IPR035242 Y89_2426 Y89_2427 IPR029058 Alpha/Beta hydrolase fold Y89_2428 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Y89_2429 IPR025711 PepSY domain Y89_2430 IPR025711 PepSY domain Y89_2431 IPR001789 Signal transduction response regulator, receiver domain Y89_2431 IPR001867 Signal transduction response regulator, C-terminal Y89_2431 IPR011006 CheY-like superfamily Y89_2431 IPR016032 Signal transduction response regulator, C-terminal effector Y89_2431 IPR036388 Y89_2431 Y89_2432 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_2432 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_2432 IPR036097 Y89_2432 Y89_2432 IPR036890 Y89_2432 Y89_2434 IPR003660 HAMP linker domain Y89_2434 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_2434 IPR033479 Y89_2434 Y89_2435 IPR018461 Na+/H+ antiporter, NhaC-like Y89_2435 IPR032813 Y89_2435 Y89_2436 IPR003660 HAMP linker domain Y89_2436 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_2436 IPR004090 Chemotaxis methyl-accepting receptor Y89_2436 IPR033480 Y89_2436 Y89_2437 IPR002549 Uncharacterised protein family UPF0118 Y89_2438 IPR013216 Methyltransferase type 11 Y89_2438 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_2439 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Y89_2439 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 Y89_2440 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Y89_2440 IPR003918 NADH:ubiquinone oxidoreductase Y89_2440 IPR010227 NADH-quinone oxidoreductase, chain M/4 Y89_2441 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal Y89_2441 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Y89_2441 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 Y89_2441 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup Y89_2442 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K Y89_2442 IPR039428 Y89_2442 Y89_2443 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 Y89_2444 IPR010226 NADH-quinone oxidoreductase, chain I Y89_2444 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_2444 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_2445 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Y89_2445 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site Y89_2446 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site Y89_2446 IPR006656 Molybdopterin oxidoreductase Y89_2446 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Y89_2446 IPR009010 Aspartate decarboxylase-like domain Y89_2446 IPR010228 NADH:ubiquinone oxidoreductase, subunit G Y89_2446 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Y89_2446 IPR036010 Y89_2446 Y89_2447 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site Y89_2447 IPR011537 NADH ubiquinone oxidoreductase, F subunit Y89_2447 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit Y89_2447 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding Y89_2447 IPR037207 Y89_2447 Y89_2447 IPR037225 Y89_2447 Y89_2448 IPR002023 NADH-quinone oxidoreductase subunit E-like Y89_2448 IPR036249 Y89_2448 Y89_2449 IPR001135 NADH-quinone oxidoreductase, subunit D Y89_2449 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Y89_2449 IPR010218 NADH dehydrogenase, subunit C Y89_2449 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site Y89_2449 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H Y89_2449 IPR023062 NADH dehydrogenase, subunit CD Y89_2449 IPR029014 NiFe hydrogenase-like Y89_2449 IPR037232 Y89_2449 Y89_2449 IPR038290 Y89_2449 Y89_2450 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Y89_2450 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit Y89_2451 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 Y89_2451 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid Y89_2451 IPR038430 Y89_2451 Y89_2452 IPR027961 Protein of unknown function DUF4442 Y89_2452 IPR029069 HotDog domain Y89_2453 IPR008557 Protein of unknown function DUF839 Y89_2454 IPR006254 Isocitrate lyase Y89_2454 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_2455 IPR004846 Type II/III secretion system Y89_2455 IPR005644 NolW-like Y89_2455 IPR038591 Y89_2455 Y89_2457 IPR000182 GNAT domain Y89_2457 IPR016181 Acyl-CoA N-acyltransferase Y89_2458 IPR003347 JmjC domain Y89_2459 IPR000362 Fumarate lyase family Y89_2459 IPR004769 Adenylosuccinate lyase Y89_2459 IPR008948 L-Aspartase-like Y89_2459 IPR013539 Adenylosuccinate lyase PurB, C-terminal Y89_2459 IPR020557 Fumarate lyase, conserved site Y89_2459 IPR022761 Fumarate lyase, N-terminal Y89_2459 IPR024083 Fumarase/histidase, N-terminal Y89_2460 IPR000620 Drug/metabolite transporter Y89_2461 IPR007451 Uncharacterised protein family UPF0274 Y89_2461 IPR035932 Y89_2461 Y89_2462 IPR004506 tRNA-specific 2-thiouridylase Y89_2462 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_2462 IPR023382 Adenine nucleotide alpha hydrolase-like domains Y89_2463 IPR000086 NUDIX hydrolase domain Y89_2463 IPR015797 NUDIX hydrolase domain-like Y89_2463 IPR020084 NUDIX hydrolase, conserved site Y89_2464 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric Y89_2465 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic Y89_2465 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Y89_2465 IPR024084 Isopropylmalate dehydrogenase-like domain Y89_2466 IPR002059 Cold-shock protein, DNA-binding Y89_2466 IPR011129 Cold shock protein Y89_2466 IPR012156 Cold shock, CspA Y89_2466 IPR012340 Nucleic acid-binding, OB-fold Y89_2466 IPR012751 CspD, cold shock Y89_2466 IPR019844 Cold-shock conserved site Y89_2467 IPR003769 Adaptor protein ClpS, core Y89_2467 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Y89_2467 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Y89_2468 IPR001270 ClpA/B family Y89_2468 IPR003593 AAA+ ATPase domain Y89_2468 IPR003959 ATPase, AAA-type, core Y89_2468 IPR004176 Clp, N-terminal Y89_2468 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA Y89_2468 IPR018368 ClpA/B, conserved site 1 Y89_2468 IPR019489 Clp ATPase, C-terminal Y89_2468 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2468 IPR028299 ClpA/B, conserved site 2 Y89_2468 IPR036628 Y89_2468 Y89_2469 IPR004368 Translation initiation factor IF-1 Y89_2469 IPR006196 RNA-binding domain, S1, IF1 type Y89_2469 IPR012340 Nucleic acid-binding, OB-fold Y89_2469 IPR022967 RNA-binding domain, S1 Y89_2470 IPR007471 Arginine-tRNA-protein transferase, N-terminal Y89_2470 IPR007472 Arginine-tRNA-protein transferase, C-terminal Y89_2470 IPR016181 Acyl-CoA N-acyltransferase Y89_2470 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic Y89_2471 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase Y89_2471 IPR016181 Acyl-CoA N-acyltransferase Y89_2472 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II Y89_2472 IPR005982 Thioredoxin reductase Y89_2472 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Y89_2472 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_2472 IPR036188 Y89_2472 Y89_2473 IPR002543 FtsK domain Y89_2473 IPR018541 FtsK gamma domain Y89_2473 IPR025199 Domain of unknown function DUF4117 Y89_2473 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2473 IPR036388 Y89_2473 Y89_2473 IPR036390 Y89_2473 Y89_2474 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Y89_2474 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria Y89_2474 IPR029046 Lipoprotein localisation LolA/LolB/LppX Y89_2475 IPR003593 AAA+ ATPase domain Y89_2475 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal Y89_2475 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Y89_2475 IPR021886 MgsA AAA+ ATPase C-terminal Y89_2475 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2475 IPR032423 Y89_2475 Y89_2476 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain Y89_2476 IPR002317 Serine-tRNA ligase, type1 Y89_2476 IPR010978 tRNA-binding arm Y89_2476 IPR015866 Serine-tRNA synthetase, type1, N-terminal Y89_2477 IPR000878 Tetrapyrrole methylase Y89_2477 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Y89_2477 IPR006366 Uroporphyrin-III C-methyltransferase Y89_2477 IPR006367 Sirohaem synthase, N-terminal Y89_2477 IPR012409 Sirohaem synthase Y89_2477 IPR014776 Tetrapyrrole methylase, subdomain 2 Y89_2477 IPR014777 Tetrapyrrole methylase, subdomain 1 Y89_2477 IPR019478 Sirohaem synthase, dimerisation domain Y89_2477 IPR028281 Siroheme synthase, central domain Y89_2477 IPR035996 Y89_2477 Y89_2477 IPR036291 Y89_2477 Y89_2477 IPR037115 Y89_2477 Y89_2478 IPR004045 Glutathione S-transferase, N-terminal Y89_2478 IPR016639 Glutathione S-transferase (GST) Y89_2478 IPR036249 Y89_2478 Y89_2478 IPR036282 Y89_2478 Y89_2479 IPR000312 Glycosyl transferase, family 3 Y89_2479 IPR017459 Glycosyl transferase family 3, N-terminal domain Y89_2479 IPR035902 Y89_2479 Y89_2479 IPR036320 Y89_2479 Y89_2480 IPR007453 Sulphur transfer protein DsrC/TusE Y89_2480 IPR025526 DsrC-like domain Y89_2481 IPR007215 Sulphur relay, TusB/DsrH Y89_2481 IPR027396 DsrEFH-like Y89_2482 IPR003787 Sulphur relay, DsrE/F-like protein Y89_2482 IPR017462 Sulphur relay, TusC/DsrF Y89_2482 IPR027396 DsrEFH-like Y89_2483 IPR003787 Sulphur relay, DsrE/F-like protein Y89_2483 IPR017463 Sulphur relay, TusD/DsrE Y89_2483 IPR027396 DsrEFH-like Y89_2484 IPR006213 Bax inhibitor 1, conserved site Y89_2484 IPR006214 Bax inhibitor 1-related Y89_2485 IPR001307 Thiosulphate sulfurtransferase, conserved site Y89_2485 IPR001763 Rhodanese-like domain Y89_2485 IPR036873 Y89_2485 Y89_2486 IPR010300 Cysteine dioxygenase type I Y89_2486 IPR011051 RmlC-like cupin domain Y89_2486 IPR014710 RmlC-like jelly roll fold Y89_2487 IPR000847 Transcription regulator HTH, LysR Y89_2487 IPR005119 LysR, substrate-binding Y89_2487 IPR036388 Y89_2487 Y89_2487 IPR036390 Y89_2487 Y89_2488 IPR011251 Luciferase-like domain Y89_2488 IPR036661 Y89_2488 Y89_2489 IPR001638 Extracellular solute-binding protein, family 3 Y89_2489 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates Y89_2489 IPR015168 SsuA/THI5-like Y89_2490 IPR011251 Luciferase-like domain Y89_2490 IPR036661 Y89_2490 Y89_2491 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2491 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2491 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Y89_2491 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2491 IPR036250 Y89_2491 Y89_2491 IPR037069 Y89_2491 Y89_2492 IPR001638 Extracellular solute-binding protein, family 3 Y89_2492 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates Y89_2492 IPR015168 SsuA/THI5-like Y89_2493 IPR001638 Extracellular solute-binding protein, family 3 Y89_2493 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates Y89_2493 IPR015168 SsuA/THI5-like Y89_2494 IPR001638 Extracellular solute-binding protein, family 3 Y89_2494 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates Y89_2494 IPR015168 SsuA/THI5-like Y89_2496 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Y89_2496 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_2497 IPR000792 Transcription regulator LuxR, C-terminal Y89_2497 IPR016032 Signal transduction response regulator, C-terminal effector Y89_2497 IPR036388 Y89_2497 Y89_2498 IPR000531 TonB-dependent receptor, beta-barrel Y89_2498 IPR011662 Secretin/TonB, short N-terminal Y89_2498 IPR012910 TonB-dependent receptor, plug Y89_2498 IPR036942 Y89_2498 Y89_2498 IPR037066 Y89_2498 Y89_2499 IPR011701 Major facilitator superfamily Y89_2499 IPR036259 Y89_2499 Y89_2500 IPR009057 Homeodomain-like Y89_2500 IPR018060 DNA binding HTH domain, AraC-type Y89_2500 IPR032687 Y89_2500 Y89_2501 IPR002938 Monooxygenase, FAD-binding Y89_2501 IPR036188 Y89_2501 Y89_2502 IPR000792 Transcription regulator LuxR, C-terminal Y89_2502 IPR001789 Signal transduction response regulator, receiver domain Y89_2502 IPR011006 CheY-like superfamily Y89_2502 IPR016032 Signal transduction response regulator, C-terminal effector Y89_2503 IPR000305 GIY-YIG nuclease superfamily Y89_2503 IPR001162 UvrC family homology region Y89_2503 IPR001943 UVR domain Y89_2503 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Y89_2503 IPR004791 UvrABC system, subunit C Y89_2503 IPR010994 RuvA domain 2-like Y89_2503 IPR035901 Y89_2503 Y89_2503 IPR036876 Y89_2503 Y89_2503 IPR038476 Y89_2503 Y89_2504 IPR000462 CDP-alcohol phosphatidyltransferase Y89_2504 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Y89_2505 IPR002104 Integrase, catalytic Y89_2505 IPR010998 Integrase, Lambda-type, N-terminal Y89_2505 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_2505 IPR013762 Integrase-like, catalytic core Y89_2505 IPR025166 Domain of unknown function DUF4102 Y89_2505 IPR038488 Y89_2505 Y89_2506 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Y89_2506 IPR036165 Y89_2506 Y89_2507 IPR009614 Toxin YoeB Y89_2507 IPR035093 Y89_2507 Y89_2508 IPR022213 Protein of unknown function DUF3742 Y89_2509 IPR012931 TraG-like, N-terminal Y89_2511 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_2511 IPR013762 Integrase-like, catalytic core Y89_2511 IPR024456 Integrase catalytic domain, putative Y89_2511 IPR024457 Putative integrase, N-terminal Y89_2513 IPR003721 Pantoate-beta-alanine ligase Y89_2513 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_2514 IPR001647 DNA-binding HTH domain, TetR-type Y89_2514 IPR009057 Homeodomain-like Y89_2514 IPR013570 Transcription regulator YsiA, C-terminal Y89_2514 IPR036271 Y89_2514 Y89_2515 IPR002155 Thiolase Y89_2515 IPR016039 Thiolase-like Y89_2515 IPR020610 Thiolase, active site Y89_2515 IPR020613 Thiolase, conserved site Y89_2515 IPR020615 Thiolase, acyl-enzyme intermediate active site Y89_2515 IPR020616 Thiolase, N-terminal Y89_2515 IPR020617 Thiolase, C-terminal Y89_2516 IPR004164 Coenzyme A transferase active site Y89_2516 IPR004165 Coenzyme A transferase family I Y89_2516 IPR012791 3-oxoacid CoA-transferase, subunit B Y89_2516 IPR037171 Y89_2516 Y89_2517 IPR004163 Coenzyme A transferase binding site Y89_2517 IPR004165 Coenzyme A transferase family I Y89_2517 IPR012792 3-oxoacid CoA-transferase, subunit A Y89_2517 IPR037171 Y89_2517 Y89_2518 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site Y89_2518 IPR000891 Pyruvate carboxyltransferase Y89_2518 IPR013785 Aldolase-type TIM barrel Y89_2519 IPR000089 Biotin/lipoyl attachment Y89_2519 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Y89_2519 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal Y89_2519 IPR005482 Biotin carboxylase, C-terminal Y89_2519 IPR011053 Single hybrid motif Y89_2519 IPR011054 Rudiment single hybrid motif Y89_2519 IPR016185 Pre-ATP-grasp domain Y89_2520 IPR001753 Crotonase superfamily Y89_2520 IPR014748 Crontonase, C-terminal Y89_2520 IPR029045 ClpP/crotonase-like domain Y89_2521 IPR029045 ClpP/crotonase-like domain Y89_2521 IPR034733 Y89_2521 Y89_2522 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_2522 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2522 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_2522 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2522 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2522 IPR036250 Y89_2522 Y89_2522 IPR037069 Y89_2522 Y89_2523 IPR000551 MerR-type HTH domain Y89_2523 IPR009061 DNA binding domain, putative Y89_2524 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain Y89_2524 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Y89_2524 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Y89_2524 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Y89_2524 IPR029061 Thiamin diphosphate-binding fold Y89_2525 IPR010727 Protein of unknown function DUF1302 Y89_2526 IPR010752 Protein of unknown function DUF1329 Y89_2527 IPR002347 Glucose/ribitol dehydrogenase Y89_2527 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2527 IPR036291 Y89_2527 Y89_2528 IPR032710 Y89_2528 Y89_2528 IPR037401 Y89_2528 Y89_2529 IPR002575 Aminoglycoside phosphotransferase Y89_2529 IPR011009 Protein kinase-like domain Y89_2530 IPR002347 Glucose/ribitol dehydrogenase Y89_2530 IPR036291 Y89_2530 Y89_2531 IPR011701 Major facilitator superfamily Y89_2531 IPR036259 Y89_2531 Y89_2532 IPR011032 GroES (chaperonin 10)-like Y89_2532 IPR013149 Alcohol dehydrogenase, C-terminal Y89_2532 IPR020843 Polyketide synthase, enoylreductase Y89_2532 IPR036291 Y89_2532 Y89_2533 IPR001647 DNA-binding HTH domain, TetR-type Y89_2533 IPR009057 Homeodomain-like Y89_2534 IPR001128 Cytochrome P450 Y89_2534 IPR002397 Cytochrome P450, B-class Y89_2534 IPR017972 Cytochrome P450, conserved site Y89_2534 IPR036396 Y89_2534 Y89_2536 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Y89_2536 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Y89_2536 IPR012132 Glucose-methanol-choline oxidoreductase Y89_2536 IPR027424 Glucose Oxidase, domain 2 Y89_2536 IPR036188 Y89_2536 Y89_2537 IPR015590 Aldehyde dehydrogenase domain Y89_2537 IPR016161 Aldehyde/histidinol dehydrogenase Y89_2537 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_2537 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_2537 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_2538 IPR010727 Protein of unknown function DUF1302 Y89_2539 IPR010752 Protein of unknown function DUF1329 Y89_2540 IPR000073 Alpha/beta hydrolase fold-1 Y89_2540 IPR029058 Alpha/Beta hydrolase fold Y89_2541 IPR009057 Homeodomain-like Y89_2541 IPR018060 DNA binding HTH domain, AraC-type Y89_2541 IPR018062 HTH domain AraC-type, conserved site Y89_2541 IPR020449 Transcription regulator HTH, AraC- type Y89_2542 IPR000847 Transcription regulator HTH, LysR Y89_2542 IPR005119 LysR, substrate-binding Y89_2542 IPR036388 Y89_2542 Y89_2542 IPR036390 Y89_2542 Y89_2543 IPR000889 Glutathione peroxidase Y89_2543 IPR029759 Glutathione peroxidase active site Y89_2543 IPR036249 Y89_2543 Y89_2544 IPR002347 Glucose/ribitol dehydrogenase Y89_2544 IPR036291 Y89_2544 Y89_2545 IPR010727 Protein of unknown function DUF1302 Y89_2546 IPR010752 Protein of unknown function DUF1329 Y89_2547 IPR015943 WD40/YVTN repeat-like-containing domain Y89_2547 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain Y89_2548 IPR004869 Membrane transport protein, MMPL domain Y89_2549 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_2550 IPR001753 Crotonase superfamily Y89_2550 IPR014748 Crontonase, C-terminal Y89_2550 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Y89_2550 IPR029045 ClpP/crotonase-like domain Y89_2551 IPR002347 Glucose/ribitol dehydrogenase Y89_2551 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2551 IPR036291 Y89_2551 Y89_2552 IPR004812 Drug resistance transporter Bcr/CmlA subfamily Y89_2552 IPR011701 Major facilitator superfamily Y89_2552 IPR036259 Y89_2552 Y89_2553 IPR002937 Amine oxidase Y89_2553 IPR036188 Y89_2553 Y89_2554 IPR001647 DNA-binding HTH domain, TetR-type Y89_2554 IPR009057 Homeodomain-like Y89_2554 IPR036271 Y89_2554 Y89_2555 IPR001128 Cytochrome P450 Y89_2555 IPR002397 Cytochrome P450, B-class Y89_2555 IPR017972 Cytochrome P450, conserved site Y89_2555 IPR036396 Y89_2555 Y89_2557 IPR002347 Glucose/ribitol dehydrogenase Y89_2557 IPR036291 Y89_2557 Y89_2558 IPR011701 Major facilitator superfamily Y89_2558 IPR036259 Y89_2558 Y89_2559 IPR032710 Y89_2559 Y89_2561 IPR002937 Amine oxidase Y89_2561 IPR036188 Y89_2561 Y89_2562 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_2562 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_2563 IPR006680 Amidohydrolase 1 Y89_2563 IPR032466 Y89_2563 Y89_2564 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit Y89_2564 IPR032710 Y89_2564 Y89_2565 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit Y89_2565 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain Y89_2565 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site Y89_2565 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Y89_2565 IPR036922 Y89_2565 Y89_2566 IPR011701 Major facilitator superfamily Y89_2566 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily Y89_2566 IPR036259 Y89_2566 Y89_2567 IPR016156 FAD/NAD-linked reductase, dimerisation domain Y89_2567 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_2567 IPR028202 Reductase, C-terminal Y89_2567 IPR036188 Y89_2567 Y89_2568 IPR001041 2Fe-2S ferredoxin-type domain Y89_2568 IPR001055 Adrenodoxin Y89_2568 IPR012675 Beta-grasp domain Y89_2568 IPR018298 Adrenodoxin, iron-sulphur binding site Y89_2568 IPR036010 Y89_2568 Y89_2569 IPR011701 Major facilitator superfamily Y89_2569 IPR036259 Y89_2569 Y89_2570 IPR003660 HAMP linker domain Y89_2570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_2570 IPR004090 Chemotaxis methyl-accepting receptor Y89_2571 IPR001080 3Fe-4S ferredoxin Y89_2572 IPR002347 Glucose/ribitol dehydrogenase Y89_2572 IPR036291 Y89_2572 Y89_2573 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II Y89_2573 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_2573 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_2574 IPR011234 Fumarylacetoacetase, C-terminal-related Y89_2574 IPR036663 Y89_2574 Y89_2575 IPR010290 Transmembrane secretion effector Y89_2575 IPR036259 Y89_2575 Y89_2576 IPR005471 Transcription regulator IclR, N-terminal Y89_2576 IPR014757 Transcription regulator IclR, C-terminal Y89_2576 IPR029016 GAF domain-like Y89_2576 IPR036388 Y89_2576 Y89_2576 IPR036390 Y89_2576 Y89_2577 IPR002155 Thiolase Y89_2577 IPR016039 Thiolase-like Y89_2578 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal Y89_2578 IPR012340 Nucleic acid-binding, OB-fold Y89_2578 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal Y89_2579 IPR002347 Glucose/ribitol dehydrogenase Y89_2579 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2579 IPR036291 Y89_2579 Y89_2580 IPR011234 Fumarylacetoacetase, C-terminal-related Y89_2580 IPR036663 Y89_2580 Y89_2581 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit Y89_2581 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain Y89_2581 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site Y89_2581 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Y89_2581 IPR036922 Y89_2581 Y89_2582 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit Y89_2582 IPR032710 Y89_2582 Y89_2583 IPR021312 Protein of unknown function DUF2889 Y89_2584 IPR002347 Glucose/ribitol dehydrogenase Y89_2584 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2584 IPR036291 Y89_2584 Y89_2585 IPR000873 AMP-dependent synthetase/ligase Y89_2585 IPR020845 AMP-binding, conserved site Y89_2585 IPR025110 AMP-binding enzyme C-terminal domain Y89_2586 IPR001647 DNA-binding HTH domain, TetR-type Y89_2586 IPR009057 Homeodomain-like Y89_2587 IPR006680 Amidohydrolase 1 Y89_2587 IPR032466 Y89_2587 Y89_2588 IPR011234 Fumarylacetoacetase, C-terminal-related Y89_2588 IPR018833 Domain of unknown function DUF2437 Y89_2588 IPR036663 Y89_2588 Y89_2589 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Y89_2589 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Y89_2589 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_2589 IPR013328 Dehydrogenase, multihelical Y89_2589 IPR022694 3-hydroxyacyl-CoA dehydrogenase Y89_2589 IPR036291 Y89_2589 Y89_2590 IPR002155 Thiolase Y89_2590 IPR016039 Thiolase-like Y89_2590 IPR020613 Thiolase, conserved site Y89_2590 IPR020616 Thiolase, N-terminal Y89_2590 IPR020617 Thiolase, C-terminal Y89_2591 IPR003779 Carboxymuconolactone decarboxylase-like Y89_2591 IPR029032 AhpD-like Y89_2592 IPR001128 Cytochrome P450 Y89_2592 IPR002397 Cytochrome P450, B-class Y89_2592 IPR017972 Cytochrome P450, conserved site Y89_2592 IPR036396 Y89_2592 Y89_2593 IPR006680 Amidohydrolase 1 Y89_2593 IPR032466 Y89_2593 Y89_2594 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_2594 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2594 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2594 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2594 IPR037069 Y89_2594 Y89_2595 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_2595 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2595 IPR036250 Y89_2595 Y89_2595 IPR037069 Y89_2595 Y89_2596 IPR001753 Crotonase superfamily Y89_2596 IPR014748 Crontonase, C-terminal Y89_2596 IPR029045 ClpP/crotonase-like domain Y89_2597 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_2597 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2597 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_2597 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2597 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2597 IPR036250 Y89_2597 Y89_2597 IPR037069 Y89_2597 Y89_2598 IPR004010 Cache domain Y89_2599 IPR000620 Drug/metabolite transporter Y89_2600 IPR006680 Amidohydrolase 1 Y89_2600 IPR032466 Y89_2600 Y89_2601 IPR002347 Glucose/ribitol dehydrogenase Y89_2601 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2601 IPR036291 Y89_2601 Y89_2603 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_2604 IPR001638 Extracellular solute-binding protein, family 3 Y89_2604 IPR001789 Signal transduction response regulator, receiver domain Y89_2604 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_2604 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_2604 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_2604 IPR011006 CheY-like superfamily Y89_2604 IPR036097 Y89_2604 Y89_2604 IPR036890 Y89_2604 Y89_2605 IPR016103 ProQ/FinO domain Y89_2605 IPR036442 Y89_2605 Y89_2607 IPR003680 Flavodoxin-like fold Y89_2607 IPR029039 Flavoprotein-like Y89_2608 IPR004981 Tryptophan 2,3-dioxygenase Y89_2608 IPR017485 Tryptophan 2,3-dioxygenase, bacterial Y89_2608 IPR037217 Y89_2608 Y89_2609 IPR000182 GNAT domain Y89_2609 IPR016181 Acyl-CoA N-acyltransferase Y89_2610 IPR000485 AsnC-type HTH domain Y89_2610 IPR011008 Dimeric alpha-beta barrel Y89_2610 IPR019887 Transcription regulator AsnC-type, C-terminal Y89_2610 IPR019888 Transcription regulator AsnC-type Y89_2610 IPR036388 Y89_2610 Y89_2610 IPR036390 Y89_2610 Y89_2611 IPR000620 Drug/metabolite transporter Y89_2612 IPR000415 Nitroreductase-like Y89_2612 IPR029479 Nitroreductase Y89_2613 IPR005804 Fatty acid desaturase, type 1 Y89_2614 IPR003660 HAMP linker domain Y89_2614 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_2615 IPR001789 Signal transduction response regulator, receiver domain Y89_2615 IPR011006 CheY-like superfamily Y89_2616 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_2616 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_2616 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_2616 IPR036097 Y89_2616 Y89_2616 IPR036890 Y89_2616 Y89_2617 IPR008979 Galactose-binding domain-like Y89_2617 IPR012905 PA-IL-like Y89_2620 IPR000160 GGDEF domain Y89_2620 IPR001633 EAL domain Y89_2620 IPR003018 GAF domain Y89_2620 IPR029016 GAF domain-like Y89_2620 IPR029787 Nucleotide cyclase Y89_2620 IPR035919 Y89_2620 Y89_2622 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_2622 IPR036188 Y89_2622 Y89_2623 IPR012440 Protein of unknown function DUF1641 Y89_2624 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal Y89_2624 IPR023506 Trans-aconitate 2-methyltransferase Y89_2624 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_2625 IPR002645 STAS domain Y89_2625 IPR011547 Sulphate transporter Y89_2625 IPR018045 Sulphate anion transporter, conserved site Y89_2625 IPR036513 Y89_2625 Y89_2626 IPR024572 Protein of unknown function DUF3315 Y89_2627 IPR003660 HAMP linker domain Y89_2627 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_2627 IPR004090 Chemotaxis methyl-accepting receptor Y89_2630 IPR032543 Y89_2630 Y89_2632 IPR003416 MgtC/SapB/SrpB transporter Y89_2633 IPR000873 AMP-dependent synthetase/ligase Y89_2633 IPR020845 AMP-binding, conserved site Y89_2633 IPR025110 AMP-binding enzyme C-terminal domain Y89_2634 IPR009057 Homeodomain-like Y89_2634 IPR018060 DNA binding HTH domain, AraC-type Y89_2634 IPR020449 Transcription regulator HTH, AraC- type Y89_2634 IPR032687 Y89_2634 Y89_2635 IPR000873 AMP-dependent synthetase/ligase Y89_2635 IPR020845 AMP-binding, conserved site Y89_2635 IPR025110 AMP-binding enzyme C-terminal domain Y89_2636 IPR002347 Glucose/ribitol dehydrogenase Y89_2636 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2636 IPR036291 Y89_2636 Y89_2637 IPR002155 Thiolase Y89_2637 IPR016039 Thiolase-like Y89_2637 IPR020610 Thiolase, active site Y89_2637 IPR020615 Thiolase, acyl-enzyme intermediate active site Y89_2637 IPR020616 Thiolase, N-terminal Y89_2637 IPR020617 Thiolase, C-terminal Y89_2638 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_2638 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2638 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_2638 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2638 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2638 IPR036250 Y89_2638 Y89_2638 IPR037069 Y89_2638 Y89_2639 IPR000847 Transcription regulator HTH, LysR Y89_2639 IPR005119 LysR, substrate-binding Y89_2639 IPR036388 Y89_2639 Y89_2639 IPR036390 Y89_2639 Y89_2640 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2640 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_2640 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2640 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2640 IPR036250 Y89_2640 Y89_2640 IPR037069 Y89_2640 Y89_2642 IPR005496 Integral membrane protein TerC Y89_2642 IPR022369 Integral membrane protein TerC, riboswitch-linked Y89_2643 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_2643 IPR024370 PBP domain Y89_2643 IPR036737 Y89_2643 Y89_2644 IPR000847 Transcription regulator HTH, LysR Y89_2644 IPR005119 LysR, substrate-binding Y89_2644 IPR036388 Y89_2644 Y89_2644 IPR036390 Y89_2644 Y89_2645 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_2645 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_2646 IPR004808 AP endonuclease 1 Y89_2646 IPR005135 Endonuclease/exonuclease/phosphatase Y89_2646 IPR020847 AP endonuclease 1, binding site Y89_2646 IPR036691 Y89_2646 Y89_2647 IPR000182 GNAT domain Y89_2647 IPR016181 Acyl-CoA N-acyltransferase Y89_2648 IPR000184 Bacterial surface antigen (D15) Y89_2648 IPR010827 Surface antigen variable number Y89_2648 IPR035243 Y89_2648 Y89_2649 IPR007452 Protein of unknown function DUF490 Y89_2650 IPR000462 CDP-alcohol phosphatidyltransferase Y89_2651 IPR022742 Putative lysophospholipase Y89_2651 IPR022744 Methyltransferase domain, putative Y89_2651 IPR029058 Alpha/Beta hydrolase fold Y89_2651 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_2652 IPR000340 Dual specificity phosphatase, catalytic domain Y89_2652 IPR020422 Dual specificity phosphatase, subgroup, catalytic domain Y89_2652 IPR029021 Protein-tyrosine phosphatase-like Y89_2654 IPR002123 Phospholipid/glycerol acyltransferase Y89_2656 IPR023210 NADP-dependent oxidoreductase domain Y89_2656 IPR036812 Y89_2656 Y89_2657 IPR000847 Transcription regulator HTH, LysR Y89_2657 IPR005119 LysR, substrate-binding Y89_2657 IPR036388 Y89_2657 Y89_2657 IPR036390 Y89_2657 Y89_2658 IPR001463 Sodium:alanine symporter Y89_2659 IPR002065 Putative thiol peroxidase Tpx Y89_2659 IPR013740 Redoxin Y89_2659 IPR018219 Thiol peroxidase conserved site Y89_2659 IPR036249 Y89_2659 Y89_2660 IPR004839 Aminotransferase, class I/classII Y89_2660 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_2660 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_2660 IPR015424 Pyridoxal phosphate-dependent transferase Y89_2661 IPR002510 TldD/PmbA Y89_2661 IPR036059 Y89_2661 Y89_2662 IPR002510 TldD/PmbA Y89_2662 IPR035068 Y89_2662 Y89_2662 IPR036059 Y89_2662 Y89_2663 IPR006143 RND efflux pump, membrane fusion protein Y89_2663 IPR039562 Y89_2663 Y89_2664 IPR001036 Acriflavin resistance protein Y89_2664 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_2665 IPR001036 Acriflavin resistance protein Y89_2665 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_2666 IPR003423 Outer membrane efflux protein Y89_2666 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_2668 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_2668 IPR003660 HAMP linker domain Y89_2668 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_2668 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_2668 IPR006290 Heavy metal sensor kinase Y89_2668 IPR036097 Y89_2668 Y89_2668 IPR036890 Y89_2668 Y89_2669 IPR001789 Signal transduction response regulator, receiver domain Y89_2669 IPR001867 Signal transduction response regulator, C-terminal Y89_2669 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response Y89_2669 IPR011006 CheY-like superfamily Y89_2669 IPR016032 Signal transduction response regulator, C-terminal effector Y89_2669 IPR036388 Y89_2669 Y89_2670 IPR003423 Outer membrane efflux protein Y89_2671 IPR006143 RND efflux pump, membrane fusion protein Y89_2671 IPR032317 Y89_2671 Y89_2672 IPR001036 Acriflavin resistance protein Y89_2672 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA Y89_2672 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_2673 IPR009057 Homeodomain-like Y89_2673 IPR018060 DNA binding HTH domain, AraC-type Y89_2673 IPR018062 HTH domain AraC-type, conserved site Y89_2673 IPR035418 Y89_2673 Y89_2673 IPR037923 Y89_2673 Y89_2674 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit Y89_2674 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain Y89_2674 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site Y89_2674 IPR017639 Benzoate 1,2-dioxygenase, large subunit Y89_2674 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Y89_2674 IPR036922 Y89_2674 Y89_2675 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit Y89_2675 IPR017641 Benzoate 1,2-dioxygenase, small subunit Y89_2675 IPR032710 Y89_2675 Y89_2676 IPR001041 2Fe-2S ferredoxin-type domain Y89_2676 IPR001221 Phenol hydroxylase reductase Y89_2676 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_2676 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Y89_2676 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Y89_2676 IPR008333 Oxidoreductase, FAD-binding domain Y89_2676 IPR012675 Beta-grasp domain Y89_2676 IPR017938 Riboflavin synthase-like beta-barrel Y89_2676 IPR036010 Y89_2676 Y89_2676 IPR039261 Y89_2676 Y89_2677 IPR002347 Glucose/ribitol dehydrogenase Y89_2677 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_2677 IPR036291 Y89_2677 Y89_2678 IPR001041 2Fe-2S ferredoxin-type domain Y89_2678 IPR001221 Phenol hydroxylase reductase Y89_2678 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_2678 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Y89_2678 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Y89_2678 IPR008333 Oxidoreductase, FAD-binding domain Y89_2678 IPR012675 Beta-grasp domain Y89_2678 IPR017938 Riboflavin synthase-like beta-barrel Y89_2678 IPR036010 Y89_2678 Y89_2678 IPR039261 Y89_2678 Y89_2679 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit Y89_2679 IPR017640 Anthranilate 1,2-dioxygenase, small subunit Y89_2679 IPR032710 Y89_2679 Y89_2680 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit Y89_2680 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain Y89_2680 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site Y89_2680 IPR017638 Anthranilate 1,2-dioxygenase, large subunit Y89_2680 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Y89_2680 IPR036922 Y89_2680 Y89_2681 IPR009057 Homeodomain-like Y89_2681 IPR018060 DNA binding HTH domain, AraC-type Y89_2681 IPR018062 HTH domain AraC-type, conserved site Y89_2681 IPR035418 Y89_2681 Y89_2682 IPR000847 Transcription regulator HTH, LysR Y89_2682 IPR005119 LysR, substrate-binding Y89_2682 IPR036388 Y89_2682 Y89_2682 IPR036390 Y89_2682 Y89_2683 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Y89_2683 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Y89_2683 IPR013370 Muconate/chloromuconate cycloisomerase Y89_2683 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site Y89_2683 IPR029017 Enolase N-terminal domain-like Y89_2683 IPR029065 Enolase C-terminal domain-like Y89_2683 IPR036849 Y89_2683 Y89_2684 IPR003464 Muconolactone delta-isomerase Y89_2684 IPR011008 Dimeric alpha-beta barrel Y89_2684 IPR026029 Muconolactone isomerase domain Y89_2685 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal Y89_2685 IPR007535 Catechol dioxygenase, N-terminal Y89_2685 IPR012801 Catechol 1,2-dioxygenase, proteobacteria Y89_2685 IPR015889 Intradiol ring-cleavage dioxygenase, core Y89_2687 IPR005318 Outer membrane porin, bacterial Y89_2687 IPR023614 Porin domain Y89_2688 IPR018689 Domain of unknown function DUF2185 Y89_2688 IPR018756 Domain of unknown function DUF2314 Y89_2689 IPR036770 Y89_2689 Y89_2690 IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain Y89_2690 IPR003591 Leucine-rich repeat, typical subtype Y89_2690 IPR011009 Protein kinase-like domain Y89_2690 IPR017441 Protein kinase, ATP binding site Y89_2690 IPR025875 Leucine rich repeat 4 Y89_2690 IPR032675 Y89_2690 Y89_2692 IPR011701 Major facilitator superfamily Y89_2692 IPR036259 Y89_2692 Y89_2693 IPR016192 APOBEC/CMP deaminase, zinc-binding Y89_2693 IPR016193 Cytidine deaminase-like Y89_2693 IPR028883 tRNA-specific adenosine deaminase Y89_2694 IPR002110 Ankyrin repeat Y89_2694 IPR020683 Ankyrin repeat-containing domain Y89_2694 IPR036770 Y89_2694 Y89_2695 IPR000847 Transcription regulator HTH, LysR Y89_2695 IPR005119 LysR, substrate-binding Y89_2695 IPR036388 Y89_2695 Y89_2695 IPR036390 Y89_2695 Y89_2696 IPR007837 DNA damage-inducible protein DinB Y89_2696 IPR034660 Y89_2696 Y89_2697 IPR003423 Outer membrane efflux protein Y89_2697 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_2698 IPR001036 Acriflavin resistance protein Y89_2698 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Y89_2698 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_2699 IPR006143 RND efflux pump, membrane fusion protein Y89_2699 IPR032317 Y89_2699 Y89_2700 IPR021679 Toxin endonuclease, YhaV Y89_2704 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2704 IPR038729 Y89_2704 Y89_2707 IPR025161 Putative transposase IS4/IS5 family Y89_2708 IPR025668 Transposase DDE domain Y89_2709 IPR000847 Transcription regulator HTH, LysR Y89_2709 IPR005119 LysR, substrate-binding Y89_2709 IPR036388 Y89_2709 Y89_2709 IPR036390 Y89_2709 Y89_2710 IPR011032 GroES (chaperonin 10)-like Y89_2710 IPR013154 Alcohol dehydrogenase GroES-like Y89_2710 IPR020843 Polyketide synthase, enoylreductase Y89_2710 IPR036291 Y89_2710 Y89_2711 IPR011051 RmlC-like cupin domain Y89_2711 IPR013096 Cupin 2, conserved barrel Y89_2711 IPR014710 RmlC-like jelly roll fold Y89_2712 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_2712 IPR009057 Homeodomain-like Y89_2712 IPR018060 DNA binding HTH domain, AraC-type Y89_2712 IPR037923 Y89_2712 Y89_2713 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_2713 IPR009057 Homeodomain-like Y89_2713 IPR011051 RmlC-like cupin domain Y89_2713 IPR018060 DNA binding HTH domain, AraC-type Y89_2713 IPR018062 HTH domain AraC-type, conserved site Y89_2713 IPR020449 Transcription regulator HTH, AraC- type Y89_2717 IPR001647 DNA-binding HTH domain, TetR-type Y89_2717 IPR009057 Homeodomain-like Y89_2717 IPR036271 Y89_2717 Y89_2718 IPR011251 Luciferase-like domain Y89_2718 IPR019949 Luciferase family oxidoreductase, group 1 Y89_2718 IPR036661 Y89_2718 Y89_2719 IPR009056 Cytochrome c-like domain Y89_2719 IPR024167 Cytochrome c4 Y89_2719 IPR036909 Y89_2719 Y89_2720 IPR009056 Cytochrome c-like domain Y89_2720 IPR036909 Y89_2720 Y89_2721 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_2721 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_2721 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_2721 IPR013727 Two-component sensor kinase N-terminal Y89_2721 IPR036097 Y89_2721 Y89_2721 IPR036890 Y89_2721 Y89_2722 IPR001789 Signal transduction response regulator, receiver domain Y89_2722 IPR001867 Signal transduction response regulator, C-terminal Y89_2722 IPR011006 CheY-like superfamily Y89_2722 IPR036388 Y89_2722 Y89_2723 IPR003834 Cytochrome c assembly protein, transmembrane domain Y89_2723 IPR017937 Thioredoxin, conserved site Y89_2723 IPR022910 Thiol:disulphide interchange protein DsbD Y89_2723 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Y89_2723 IPR036249 Y89_2723 Y89_2723 IPR036929 Y89_2723 Y89_2724 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Y89_2724 IPR017937 Thioredoxin, conserved site Y89_2724 IPR036249 Y89_2724 Y89_2725 IPR009094 Disulphide bond isomerase, DsbC, N-terminal Y89_2725 IPR012336 Thioredoxin-like fold Y89_2725 IPR036249 Y89_2725 Y89_2726 IPR001128 Cytochrome P450 Y89_2726 IPR002397 Cytochrome P450, B-class Y89_2726 IPR036396 Y89_2726 Y89_2727 IPR025737 MetA-pathway of phenol degradation, putative Y89_2728 IPR004045 Glutathione S-transferase, N-terminal Y89_2728 IPR005955 Maleylacetoacetate isomerase Y89_2728 IPR036249 Y89_2728 Y89_2728 IPR036282 Y89_2728 Y89_2729 IPR005829 Sugar transporter, conserved site Y89_2729 IPR011701 Major facilitator superfamily Y89_2729 IPR036259 Y89_2729 Y89_2731 IPR011051 RmlC-like cupin domain Y89_2731 IPR011960 Gentisate 1,2-dioxygenase Y89_2731 IPR013096 Cupin 2, conserved barrel Y89_2731 IPR014710 RmlC-like jelly roll fold Y89_2732 IPR000847 Transcription regulator HTH, LysR Y89_2732 IPR005119 LysR, substrate-binding Y89_2732 IPR036388 Y89_2732 Y89_2732 IPR036390 Y89_2732 Y89_2733 IPR007627 RNA polymerase sigma-70 region 2 Y89_2733 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_2733 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_2733 IPR013325 RNA polymerase sigma factor, region 2 Y89_2733 IPR014284 RNA polymerase sigma-70 like domain Y89_2733 IPR036388 Y89_2733 Y89_2734 IPR006860 FecR protein Y89_2734 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_2734 IPR032623 Y89_2734 Y89_2735 IPR000531 TonB-dependent receptor, beta-barrel Y89_2735 IPR010105 TonB-dependent siderophore receptor Y89_2735 IPR011662 Secretin/TonB, short N-terminal Y89_2735 IPR012910 TonB-dependent receptor, plug Y89_2735 IPR036942 Y89_2735 Y89_2735 IPR037066 Y89_2735 Y89_2736 IPR005625 PepSY-associated TM helix Y89_2738 IPR005565 Haemolysin activator HlyB Y89_2738 IPR013686 Polypeptide-transport-associated, ShlB-type Y89_2738 IPR027282 Two partner secretion pathway transporter Y89_2738 IPR035251 Y89_2738 Y89_2739 IPR008619 Filamentous haemagglutinin repeat Y89_2739 IPR008638 Filamentous haemagglutinin, N-terminal Y89_2739 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat Y89_2739 IPR011050 Pectin lyase fold/virulence factor Y89_2739 IPR012334 Pectin lyase fold Y89_2739 IPR016117 ArgJ-like domain Y89_2739 IPR025157 Haemagluttinin repeat Y89_2741 IPR006530 YD repeat Y89_2741 IPR022385 Rhs repeat-associated core Y89_2741 IPR031325 Y89_2741 Y89_2742 IPR006530 YD repeat Y89_2742 IPR031325 Y89_2742 Y89_2744 IPR000182 GNAT domain Y89_2744 IPR016181 Acyl-CoA N-acyltransferase Y89_2745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_2746 IPR010305 Protein of unknown function DUF903 Y89_2746 IPR010920 Like-Sm (LSM) domain Y89_2747 IPR000801 Putative esterase Y89_2747 IPR013783 Immunoglobulin-like fold Y89_2747 IPR014756 Immunoglobulin E-set Y89_2747 IPR021764 Enterochelin esterase, N-terminal Y89_2747 IPR029058 Alpha/Beta hydrolase fold Y89_2749 IPR000014 PAS domain Y89_2749 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_2749 IPR003593 AAA+ ATPase domain Y89_2749 IPR009057 Homeodomain-like Y89_2749 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_2749 IPR025944 Sigma-54 interaction domain, conserved site Y89_2749 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2749 IPR030828 Y89_2749 Y89_2749 IPR035965 Y89_2749 Y89_2750 IPR011059 Metal-dependent hydrolase, composite domain Y89_2750 IPR013108 Amidohydrolase 3 Y89_2750 IPR032466 Y89_2750 Y89_2751 IPR000847 Transcription regulator HTH, LysR Y89_2751 IPR005119 LysR, substrate-binding Y89_2751 IPR036388 Y89_2751 Y89_2751 IPR036390 Y89_2751 Y89_2752 IPR002930 Glycine cleavage system H-protein Y89_2752 IPR011053 Single hybrid motif Y89_2752 IPR017453 Glycine cleavage system H-protein, subgroup Y89_2752 IPR033753 Y89_2752 Y89_2753 IPR003437 Glycine cleavage system P protein, homodimeric Y89_2753 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_2753 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_2753 IPR015424 Pyridoxal phosphate-dependent transferase Y89_2753 IPR020581 Glycine cleavage system P protein Y89_2754 IPR001085 Serine hydroxymethyltransferase Y89_2754 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_2754 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_2754 IPR015424 Pyridoxal phosphate-dependent transferase Y89_2754 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site Y89_2754 IPR039429 Y89_2754 Y89_2755 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form Y89_2755 IPR005130 Serine dehydratase-like, alpha subunit Y89_2755 IPR005131 Serine dehydratase beta chain Y89_2755 IPR029009 Allosteric substrate binding domain Y89_2756 IPR006222 Glycine cleavage T-protein, N-terminal Y89_2756 IPR006223 Glycine cleavage system T protein Y89_2756 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain Y89_2756 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Y89_2756 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA Y89_2756 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain Y89_2759 IPR001107 Band 7 protein Y89_2759 IPR036013 Y89_2759 Y89_2760 IPR001107 Band 7 protein Y89_2760 IPR010200 HflC Y89_2760 IPR036013 Y89_2760 Y89_2761 IPR001107 Band 7 protein Y89_2763 IPR001757 Cation-transporting P-type ATPase Y89_2763 IPR008250 P-type ATPase, A domain Y89_2763 IPR018303 P-type ATPase, phosphorylation site Y89_2763 IPR023214 HAD-like domain Y89_2763 IPR023298 P-type ATPase, transmembrane domain Y89_2763 IPR023299 P-type ATPase, cytoplasmic domain N Y89_2763 IPR027256 Cation-transporting P-type ATPase, subfamily IB Y89_2763 IPR036412 Y89_2763 Y89_2764 IPR032543 Y89_2764 Y89_2766 IPR000847 Transcription regulator HTH, LysR Y89_2766 IPR005119 LysR, substrate-binding Y89_2766 IPR036388 Y89_2766 Y89_2766 IPR036390 Y89_2766 Y89_2767 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein Y89_2768 IPR012451 Protein of unknown function DUF1656 Y89_2769 IPR032317 Y89_2769 Y89_2771 IPR016898 Polyphosphate kinase 2 Y89_2771 IPR022486 Polyphosphate kinase 2, PA0141 Y89_2771 IPR022488 Polyphosphate kinase-2-related Y89_2771 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2773 IPR007627 RNA polymerase sigma-70 region 2 Y89_2773 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_2773 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_2773 IPR013325 RNA polymerase sigma factor, region 2 Y89_2773 IPR014284 RNA polymerase sigma-70 like domain Y89_2773 IPR036388 Y89_2773 Y89_2774 IPR001031 Thioesterase Y89_2774 IPR029058 Alpha/Beta hydrolase fold Y89_2775 IPR000873 AMP-dependent synthetase/ligase Y89_2775 IPR001242 Condensation domain Y89_2775 IPR006162 Phosphopantetheine attachment site Y89_2775 IPR009081 Acyl carrier protein-like Y89_2775 IPR010060 Non-ribosomal peptide synthase Y89_2775 IPR010071 Amino acid adenylation domain Y89_2775 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Y89_2775 IPR020845 AMP-binding, conserved site Y89_2775 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_2775 IPR025110 AMP-binding enzyme C-terminal domain Y89_2775 IPR036736 Y89_2775 Y89_2776 IPR003497 BRO N-terminal domain Y89_2778 IPR025737 MetA-pathway of phenol degradation, putative Y89_2779 IPR005318 Outer membrane porin, bacterial Y89_2779 IPR023614 Porin domain Y89_2780 IPR000868 Isochorismatase-like Y89_2780 IPR036380 Y89_2780 Y89_2781 IPR000868 Isochorismatase-like Y89_2781 IPR036380 Y89_2781 Y89_2782 IPR003829 Pirin, N-terminal domain Y89_2782 IPR008778 Pirin, C-terminal domain Y89_2782 IPR011051 RmlC-like cupin domain Y89_2782 IPR012093 Pirin Y89_2782 IPR014710 RmlC-like jelly roll fold Y89_2783 IPR000847 Transcription regulator HTH, LysR Y89_2783 IPR005119 LysR, substrate-binding Y89_2783 IPR036388 Y89_2783 Y89_2783 IPR036390 Y89_2783 Y89_2784 IPR001661 Glycoside hydrolase, family 37 Y89_2784 IPR008928 Six-hairpin glycosidase-like Y89_2784 IPR012341 Six-hairpin glycosidase Y89_2784 IPR018232 Glycoside hydrolase, family 37, conserved site Y89_2784 IPR023720 Trehalase, periplasmic Y89_2785 IPR016923 Uncharacterised conserved protein UCP029509, membrane Y89_2786 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase Y89_2786 IPR011042 Six-bladed beta-propeller, TolB-like Y89_2786 IPR012938 Glucose/Sorbosone dehydrogenase Y89_2787 IPR004637 2,4-diaminobutyrate 4-transaminase Y89_2787 IPR005814 Aminotransferase class-III Y89_2787 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_2787 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_2787 IPR015424 Pyridoxal phosphate-dependent transferase Y89_2788 IPR005153 MbtH-like protein Y89_2788 IPR038020 Y89_2788 Y89_2789 IPR001031 Thioesterase Y89_2789 IPR029058 Alpha/Beta hydrolase fold Y89_2790 IPR006127 Periplasmic solute binding protein family Y89_2791 IPR001626 ABC-3 Y89_2791 IPR037294 Y89_2791 Y89_2792 IPR003439 ABC transporter-like Y89_2792 IPR003593 AAA+ ATPase domain Y89_2792 IPR017871 ABC transporter, conserved site Y89_2792 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2793 IPR006127 Periplasmic solute binding protein family Y89_2793 IPR006128 Adhesion lipoprotein Y89_2793 IPR006129 Adhesin B Y89_2796 IPR016922 Uncharacterised conserved protein UCP029505 Y89_2797 IPR005625 PepSY-associated TM helix Y89_2798 IPR007037 Siderophore-interacting protein Y89_2798 IPR013113 FAD-binding 9, siderophore-interacting Y89_2798 IPR017938 Riboflavin synthase-like beta-barrel Y89_2798 IPR039261 Y89_2798 Y89_2799 IPR000873 AMP-dependent synthetase/ligase Y89_2799 IPR001242 Condensation domain Y89_2799 IPR006162 Phosphopantetheine attachment site Y89_2799 IPR009081 Acyl carrier protein-like Y89_2799 IPR010060 Non-ribosomal peptide synthase Y89_2799 IPR010071 Amino acid adenylation domain Y89_2799 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Y89_2799 IPR020845 AMP-binding, conserved site Y89_2799 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_2799 IPR025110 AMP-binding enzyme C-terminal domain Y89_2799 IPR036736 Y89_2799 Y89_2800 IPR000873 AMP-dependent synthetase/ligase Y89_2800 IPR001031 Thioesterase Y89_2800 IPR001242 Condensation domain Y89_2800 IPR006162 Phosphopantetheine attachment site Y89_2800 IPR009081 Acyl carrier protein-like Y89_2800 IPR010060 Non-ribosomal peptide synthase Y89_2800 IPR010071 Amino acid adenylation domain Y89_2800 IPR020802 Polyketide synthase, thioesterase domain Y89_2800 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Y89_2800 IPR020845 AMP-binding, conserved site Y89_2800 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_2800 IPR025110 AMP-binding enzyme C-terminal domain Y89_2800 IPR029058 Alpha/Beta hydrolase fold Y89_2800 IPR036736 Y89_2800 Y89_2801 IPR000531 TonB-dependent receptor, beta-barrel Y89_2801 IPR010105 TonB-dependent siderophore receptor Y89_2801 IPR011662 Secretin/TonB, short N-terminal Y89_2801 IPR012910 TonB-dependent receptor, plug Y89_2801 IPR036942 Y89_2801 Y89_2801 IPR037066 Y89_2801 Y89_2802 IPR003439 ABC transporter-like Y89_2802 IPR003593 AAA+ ATPase domain Y89_2802 IPR005898 Cyclic peptide transporter Y89_2802 IPR011527 ABC transporter type 1, transmembrane domain Y89_2802 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2802 IPR036640 Y89_2802 Y89_2803 IPR002376 Formyl transferase, N-terminal Y89_2803 IPR036477 Y89_2803 Y89_2804 IPR005532 Formylglycine-generating sulphatase enzyme domain Y89_2804 IPR016187 C-type lectin fold Y89_2805 IPR000192 Aminotransferase class V domain Y89_2805 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_2805 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_2805 IPR015424 Pyridoxal phosphate-dependent transferase Y89_2805 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site Y89_2806 IPR008257 Renal dipeptidase family Y89_2806 IPR032466 Y89_2806 Y89_2807 IPR008922 Uncharacterised domain, di-copper centre Y89_2808 IPR003423 Outer membrane efflux protein Y89_2808 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_2809 IPR003439 ABC transporter-like Y89_2809 IPR003593 AAA+ ATPase domain Y89_2809 IPR003838 Permease FtsX-like Y89_2809 IPR017871 ABC transporter, conserved site Y89_2809 IPR025857 MacB-like periplasmic core domain Y89_2809 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2810 IPR006143 RND efflux pump, membrane fusion protein Y89_2810 IPR032317 Y89_2810 Y89_2811 IPR006860 FecR protein Y89_2811 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_2811 IPR032623 Y89_2811 Y89_2812 IPR007627 RNA polymerase sigma-70 region 2 Y89_2812 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_2812 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_2812 IPR013325 RNA polymerase sigma factor, region 2 Y89_2812 IPR014284 RNA polymerase sigma-70 like domain Y89_2812 IPR036388 Y89_2812 Y89_2813 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase Y89_2813 IPR036188 Y89_2813 Y89_2814 IPR002692 Penicillin amidase-like Y89_2814 IPR014395 Penicillin/cephalosporin acylase Y89_2814 IPR023343 Penicillin amidase type, domain1 Y89_2814 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_2815 IPR016921 Uncharacterised conserved protein UCP029502 Y89_2815 IPR036388 Y89_2815 Y89_2815 IPR036390 Y89_2815 Y89_2816 IPR000847 Transcription regulator HTH, LysR Y89_2816 IPR005119 LysR, substrate-binding Y89_2816 IPR036388 Y89_2816 Y89_2816 IPR036390 Y89_2816 Y89_2817 IPR000262 FMN-dependent dehydrogenase Y89_2817 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site Y89_2817 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent Y89_2817 IPR013785 Aldolase-type TIM barrel Y89_2818 IPR012449 Bacteriophage F116, Orf28 Y89_2820 IPR001041 2Fe-2S ferredoxin-type domain Y89_2820 IPR002888 [2Fe-2S]-binding Y89_2820 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Y89_2820 IPR012675 Beta-grasp domain Y89_2820 IPR036010 Y89_2820 Y89_2820 IPR036884 Y89_2820 Y89_2821 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Y89_2821 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding Y89_2821 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related Y89_2821 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Y89_2821 IPR037165 Y89_2821 Y89_2823 IPR000792 Transcription regulator LuxR, C-terminal Y89_2823 IPR001789 Signal transduction response regulator, receiver domain Y89_2823 IPR011006 CheY-like superfamily Y89_2823 IPR016032 Signal transduction response regulator, C-terminal effector Y89_2824 IPR025460 Protein of unknown function DUF4280 Y89_2825 IPR011652 MORN variant Y89_2826 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Y89_2826 IPR010609 Gp5, C-terminal Y89_2826 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Y89_2826 IPR037026 Y89_2826 Y89_2827 IPR028208 Effector protein NleD-like Y89_2829 IPR001270 ClpA/B family Y89_2829 IPR003593 AAA+ ATPase domain Y89_2829 IPR003959 ATPase, AAA-type, core Y89_2829 IPR004176 Clp, N-terminal Y89_2829 IPR017729 Type VI secretion system, ATPase ClpV1 Y89_2829 IPR018368 ClpA/B, conserved site 1 Y89_2829 IPR019489 Clp ATPase, C-terminal Y89_2829 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2829 IPR036628 Y89_2829 Y89_2830 IPR010732 Protein of unknown function DUF1305 Y89_2831 IPR010272 Type VI secretion system, VCA0110 Y89_2832 IPR007048 GpW/Gp25/anti-adapter protein IraD Y89_2832 IPR017737 Type VI secretion system, lysozyme-related protein Y89_2833 IPR008514 Type VI secretion system effector, Hcp Y89_2833 IPR036624 Y89_2833 Y89_2834 IPR010269 Protein of unknown function DUF877 Y89_2835 IPR008312 Uncharacterised conserved protein UCP028301 Y89_2837 IPR010263 Protein of unknown function DUF876 Y89_2838 IPR017732 Type IV / VI secretion system, DotU Y89_2838 IPR038522 Y89_2838 Y89_2839 IPR025743 ImcF-related, N-terminal domain Y89_2840 IPR010657 ImpA, N-terminal Y89_2840 IPR017740 Type VI secretion system-associated, ImpA Y89_2843 IPR005025 NADPH-dependent FMN reductase-like Y89_2843 IPR019912 FMN reductase, MsuE-like Y89_2843 IPR029039 Flavoprotein-like Y89_2844 IPR011251 Luciferase-like domain Y89_2844 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent Y89_2844 IPR036661 Y89_2844 Y89_2845 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2845 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Y89_2845 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2845 IPR036250 Y89_2845 Y89_2845 IPR037069 Y89_2845 Y89_2846 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_2846 IPR003593 AAA+ ATPase domain Y89_2846 IPR009057 Homeodomain-like Y89_2846 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_2846 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_2846 IPR025944 Sigma-54 interaction domain, conserved site Y89_2846 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2847 IPR005654 ATPase, AFG1-like Y89_2847 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2848 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Y89_2848 IPR030395 Y89_2848 Y89_2849 IPR000515 MetI-like domain Y89_2849 IPR035906 Y89_2849 Y89_2850 IPR003439 ABC transporter-like Y89_2850 IPR003593 AAA+ ATPase domain Y89_2850 IPR017871 ABC transporter, conserved site Y89_2850 IPR018449 NIL domain Y89_2850 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2851 IPR004872 Lipoprotein NlpA family Y89_2852 IPR011251 Luciferase-like domain Y89_2852 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A Y89_2852 IPR036661 Y89_2852 Y89_2853 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2853 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Y89_2853 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2853 IPR023922 Sulphate-starvation-induced SfnB Y89_2853 IPR036250 Y89_2853 Y89_2853 IPR037069 Y89_2853 Y89_2854 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2854 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2854 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Y89_2854 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2854 IPR023922 Sulphate-starvation-induced SfnB Y89_2854 IPR036250 Y89_2854 Y89_2854 IPR037069 Y89_2854 Y89_2855 IPR036188 Y89_2855 Y89_2856 IPR009057 Homeodomain-like Y89_2856 IPR014875 Mor transcription activator Y89_2857 IPR009363 Bacteriophage Mu, Gp16 Y89_2860 IPR016868 Bacteriophage B3, Orf5 Y89_2860 IPR024498 Domain of unknown function DUF2786 Y89_2861 IPR021505 Bacteriophage B3, Orf6 Y89_2866 IPR003593 AAA+ ATPase domain Y89_2866 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2867 IPR001584 Integrase, catalytic core Y89_2867 IPR012337 Ribonuclease H-like domain Y89_2867 IPR036397 Y89_2867 Y89_2869 IPR005471 Transcription regulator IclR, N-terminal Y89_2869 IPR036388 Y89_2869 Y89_2869 IPR036390 Y89_2869 Y89_2873 IPR010982 Lambda repressor-like, DNA-binding domain Y89_2873 IPR026365 Phage-associated protein, BcepMu gp16 family Y89_2876 IPR025140 Protein of unknown function DUF4063 Y89_2878 IPR008258 Lytic transglycosylase-like SLT domain Y89_2878 IPR023346 Lysozyme-like domain Y89_2883 IPR021874 Bacteriophage Mu, Gp27 Y89_2884 IPR012036 Bacteriophage Mu, Gp28 Y89_2885 IPR009279 Protein of unknown function DUF935 Y89_2886 IPR006528 Phage head morphogenesis domain Y89_2887 IPR006522 Phage virion morphogensis protein Y89_2890 IPR036915 Y89_2890 Y89_2893 IPR009752 Bacteriophage Mu, Gp36 Y89_2896 IPR016893 Protein of unknown function UCP028589 Y89_2899 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal Y89_2899 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal Y89_2903 IPR011928 Bacteriophage phiJL001, Gp84 Y89_2903 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal Y89_2903 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal Y89_2905 IPR032876 Y89_2905 Y89_2910 IPR011611 Carbohydrate kinase PfkB Y89_2910 IPR029056 Ribokinase-like Y89_2911 IPR000577 Y89_2911 Y89_2911 IPR006000 Xylulokinase Y89_2911 IPR018483 Carbohydrate kinase, FGGY, conserved site Y89_2911 IPR018484 Carbohydrate kinase, FGGY, N-terminal Y89_2911 IPR018485 Carbohydrate kinase, FGGY, C-terminal Y89_2912 IPR000669 Mannitol dehydrogenase Y89_2912 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_2912 IPR013118 Mannitol dehydrogenase, C-terminal Y89_2912 IPR013131 Mannitol dehydrogenase, N-terminal Y89_2912 IPR013328 Dehydrogenase, multihelical Y89_2912 IPR023027 Mannitol dehydrogenase, conserved site Y89_2912 IPR036291 Y89_2912 Y89_2913 IPR003439 ABC transporter-like Y89_2913 IPR003593 AAA+ ATPase domain Y89_2913 IPR008995 Molybdate/tungstate binding, C-terminal Y89_2913 IPR013611 Transport-associated OB, type 2 Y89_2913 IPR017871 ABC transporter, conserved site Y89_2913 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2914 IPR000515 MetI-like domain Y89_2914 IPR035906 Y89_2914 Y89_2915 IPR000515 MetI-like domain Y89_2915 IPR035906 Y89_2915 Y89_2916 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_2917 IPR009057 Homeodomain-like Y89_2917 IPR018060 DNA binding HTH domain, AraC-type Y89_2917 IPR018062 HTH domain AraC-type, conserved site Y89_2917 IPR020449 Transcription regulator HTH, AraC- type Y89_2918 IPR010262 Arylsulfotransferase Y89_2918 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily Y89_2919 IPR000531 TonB-dependent receptor, beta-barrel Y89_2919 IPR010917 TonB-dependent receptor, conserved site Y89_2919 IPR012910 TonB-dependent receptor, plug Y89_2919 IPR036942 Y89_2919 Y89_2920 IPR000847 Transcription regulator HTH, LysR Y89_2920 IPR005119 LysR, substrate-binding Y89_2920 IPR036388 Y89_2920 Y89_2920 IPR036390 Y89_2920 Y89_2921 IPR000917 Sulfatase Y89_2921 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_2921 IPR017850 Alkaline-phosphatase-like, core domain Y89_2922 IPR009057 Homeodomain-like Y89_2922 IPR018060 DNA binding HTH domain, AraC-type Y89_2922 IPR020449 Transcription regulator HTH, AraC- type Y89_2922 IPR032783 Y89_2922 Y89_2923 IPR003779 Carboxymuconolactone decarboxylase-like Y89_2923 IPR004675 Alkylhydroperoxidase AhpD core Y89_2923 IPR029032 AhpD-like Y89_2924 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2924 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2924 IPR037069 Y89_2924 Y89_2925 IPR003439 ABC transporter-like Y89_2925 IPR003593 AAA+ ATPase domain Y89_2925 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2927 IPR000515 MetI-like domain Y89_2927 IPR035906 Y89_2927 Y89_2928 IPR011251 Luciferase-like domain Y89_2928 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A Y89_2928 IPR036661 Y89_2928 Y89_2929 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2929 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2929 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Y89_2929 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2929 IPR023922 Sulphate-starvation-induced SfnB Y89_2929 IPR036250 Y89_2929 Y89_2929 IPR037069 Y89_2929 Y89_2930 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_2930 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2930 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Y89_2930 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_2930 IPR036250 Y89_2930 Y89_2930 IPR037069 Y89_2930 Y89_2931 IPR015590 Aldehyde dehydrogenase domain Y89_2931 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_2931 IPR016161 Aldehyde/histidinol dehydrogenase Y89_2931 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_2931 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_2933 IPR003474 Gluconate transporter Y89_2934 IPR006001 Carbohydrate kinase, thermoresistant glucokinase Y89_2934 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2935 IPR000843 Transcription regulator HTH, LacI Y89_2935 IPR010982 Lambda repressor-like, DNA-binding domain Y89_2935 IPR028082 Periplasmic binding protein-like I Y89_2936 IPR008579 Domain of unknown function DUF861, cupin-3 Y89_2936 IPR011051 RmlC-like cupin domain Y89_2936 IPR014710 RmlC-like jelly roll fold Y89_2937 IPR006076 FAD dependent oxidoreductase Y89_2937 IPR036188 Y89_2937 Y89_2938 IPR000847 Transcription regulator HTH, LysR Y89_2938 IPR005119 LysR, substrate-binding Y89_2938 IPR036388 Y89_2938 Y89_2938 IPR036390 Y89_2938 Y89_2939 IPR001466 Beta-lactamase-related Y89_2939 IPR012338 Beta-lactamase/transpeptidase-like Y89_2940 IPR011701 Major facilitator superfamily Y89_2940 IPR036259 Y89_2940 Y89_2942 IPR001387 Cro/C1-type helix-turn-helix domain Y89_2942 IPR010982 Lambda repressor-like, DNA-binding domain Y89_2942 IPR011051 RmlC-like cupin domain Y89_2942 IPR013096 Cupin 2, conserved barrel Y89_2942 IPR014710 RmlC-like jelly roll fold Y89_2944 IPR003819 Taurine catabolism dioxygenase TauD/TfdA Y89_2946 IPR003439 ABC transporter-like Y89_2946 IPR003593 AAA+ ATPase domain Y89_2946 IPR017871 ABC transporter, conserved site Y89_2946 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2947 IPR000515 MetI-like domain Y89_2947 IPR035906 Y89_2947 Y89_2948 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_2949 IPR000873 AMP-dependent synthetase/ligase Y89_2949 IPR001242 Condensation domain Y89_2949 IPR006162 Phosphopantetheine attachment site Y89_2949 IPR009081 Acyl carrier protein-like Y89_2949 IPR010071 Amino acid adenylation domain Y89_2949 IPR020845 AMP-binding, conserved site Y89_2949 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_2949 IPR025110 AMP-binding enzyme C-terminal domain Y89_2949 IPR036736 Y89_2949 Y89_2950 IPR003819 Taurine catabolism dioxygenase TauD/TfdA Y89_2951 IPR003819 Taurine catabolism dioxygenase TauD/TfdA Y89_2952 IPR000873 AMP-dependent synthetase/ligase Y89_2952 IPR001031 Thioesterase Y89_2952 IPR001242 Condensation domain Y89_2952 IPR006162 Phosphopantetheine attachment site Y89_2952 IPR006342 Methyltransferase FkbM Y89_2952 IPR009081 Acyl carrier protein-like Y89_2952 IPR010071 Amino acid adenylation domain Y89_2952 IPR020802 Polyketide synthase, thioesterase domain Y89_2952 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Y89_2952 IPR020845 AMP-binding, conserved site Y89_2952 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_2952 IPR029058 Alpha/Beta hydrolase fold Y89_2952 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_2952 IPR036736 Y89_2952 Y89_2953 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Y89_2953 IPR036754 Y89_2953 Y89_2954 IPR001223 Glycoside hydrolase, family 18, catalytic domain Y89_2954 IPR001579 Glycoside hydrolase, chitinase active site Y89_2954 IPR003610 Carbohydrate-binding module family 5/12 Y89_2954 IPR003961 Fibronectin, type III Y89_2954 IPR013783 Immunoglobulin-like fold Y89_2954 IPR017853 Glycoside hydrolase, superfamily Y89_2954 IPR036116 Y89_2954 Y89_2954 IPR036573 Y89_2954 Y89_2955 IPR000524 Transcription regulator HTH, GntR Y89_2955 IPR011663 UbiC transcription regulator-associated Y89_2955 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Y89_2955 IPR036388 Y89_2955 Y89_2955 IPR036390 Y89_2955 Y89_2956 IPR003953 FAD binding domain Y89_2956 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Y89_2956 IPR036188 Y89_2956 Y89_2956 IPR037099 Y89_2956 Y89_2957 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_2957 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_2959 IPR000515 MetI-like domain Y89_2959 IPR035906 Y89_2959 Y89_2960 IPR003439 ABC transporter-like Y89_2960 IPR003593 AAA+ ATPase domain Y89_2960 IPR017871 ABC transporter, conserved site Y89_2960 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_2961 IPR004155 PBS lyase HEAT-like repeat Y89_2961 IPR011989 Armadillo-like helical Y89_2961 IPR016024 Armadillo-type fold Y89_2963 IPR007049 Carbohydrate-selective porin OprB Y89_2963 IPR038673 Y89_2963 Y89_2964 IPR002372 Pyrrolo-quinoline quinone repeat Y89_2964 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily Y89_2964 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related Y89_2964 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Y89_2965 IPR000531 TonB-dependent receptor, beta-barrel Y89_2965 IPR012910 TonB-dependent receptor, plug Y89_2965 IPR036942 Y89_2965 Y89_2965 IPR037066 Y89_2965 Y89_2968 IPR001915 Peptidase M48 Y89_2971 IPR001915 Peptidase M48 Y89_2973 IPR009057 Homeodomain-like Y89_2973 IPR018060 DNA binding HTH domain, AraC-type Y89_2973 IPR018062 HTH domain AraC-type, conserved site Y89_2974 IPR005025 NADPH-dependent FMN reductase-like Y89_2974 IPR014063 Arsenate resistance ArsH Y89_2974 IPR029039 Flavoprotein-like Y89_2975 IPR023485 Phosphotyrosine protein phosphatase I superfamily Y89_2975 IPR036196 Y89_2975 Y89_2976 IPR000802 Arsenical pump membrane protein, ArsB Y89_2977 IPR001845 HTH ArsR-type DNA-binding domain Y89_2977 IPR036388 Y89_2977 Y89_2977 IPR036390 Y89_2977 Y89_2978 IPR009057 Homeodomain-like Y89_2978 IPR009594 Transcription regulator HTH, AraC, N-terminal Y89_2978 IPR018060 DNA binding HTH domain, AraC-type Y89_2979 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Y89_2979 IPR011032 GroES (chaperonin 10)-like Y89_2979 IPR013149 Alcohol dehydrogenase, C-terminal Y89_2979 IPR013154 Alcohol dehydrogenase GroES-like Y89_2979 IPR020843 Polyketide synthase, enoylreductase Y89_2979 IPR036291 Y89_2979 Y89_2980 IPR007138 Antibiotic biosynthesis monooxygenase-like domain Y89_2980 IPR011008 Dimeric alpha-beta barrel Y89_2981 IPR000551 MerR-type HTH domain Y89_2981 IPR009061 DNA binding domain, putative Y89_2981 IPR010211 Redox-sensitive transcriptional activator SoxR Y89_2981 IPR015358 Transcription regulator MerR, DNA binding Y89_2982 IPR001460 Penicillin-binding protein, transpeptidase Y89_2982 IPR005311 Penicillin-binding protein, dimerisation domain Y89_2982 IPR012338 Beta-lactamase/transpeptidase-like Y89_2982 IPR036138 Y89_2982 Y89_2982 IPR037532 Y89_2982 Y89_2983 IPR000182 GNAT domain Y89_2983 IPR016181 Acyl-CoA N-acyltransferase Y89_2984 IPR001647 DNA-binding HTH domain, TetR-type Y89_2984 IPR009057 Homeodomain-like Y89_2984 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y89_2985 IPR036259 Y89_2985 Y89_2986 IPR007138 Antibiotic biosynthesis monooxygenase-like domain Y89_2986 IPR011008 Dimeric alpha-beta barrel Y89_2986 IPR017926 Glutamine amidotransferase Y89_2986 IPR029062 Class I glutamine amidotransferase-like Y89_2987 IPR000847 Transcription regulator HTH, LysR Y89_2987 IPR005119 LysR, substrate-binding Y89_2987 IPR036388 Y89_2987 Y89_2987 IPR036390 Y89_2987 Y89_2988 IPR008168 Cytochrome c, class IC Y89_2988 IPR009056 Cytochrome c-like domain Y89_2988 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit Y89_2988 IPR036909 Y89_2988 Y89_2989 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Y89_2989 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Y89_2989 IPR036188 Y89_2989 Y89_2990 IPR027056 Gluconate 2-dehydrogenase subunit 3 Y89_2991 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y89_2991 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Y89_2991 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Y89_2991 IPR036291 Y89_2991 Y89_2992 IPR000849 Sugar phosphate transporter Y89_2992 IPR011701 Major facilitator superfamily Y89_2992 IPR036259 Y89_2992 Y89_2993 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Y89_2993 IPR011611 Carbohydrate kinase PfkB Y89_2993 IPR029056 Ribokinase-like Y89_2994 IPR013022 Xylose isomerase-like, TIM barrel domain Y89_2994 IPR036237 Y89_2994 Y89_2995 IPR000843 Transcription regulator HTH, LacI Y89_2995 IPR001761 Periplasmic binding protein/LacI sugar binding domain Y89_2995 IPR010982 Lambda repressor-like, DNA-binding domain Y89_2995 IPR028082 Periplasmic binding protein-like I Y89_2996 IPR000847 Transcription regulator HTH, LysR Y89_2996 IPR005119 LysR, substrate-binding Y89_2996 IPR036388 Y89_2996 Y89_2996 IPR036390 Y89_2996 Y89_2997 IPR009056 Cytochrome c-like domain Y89_2997 IPR024167 Cytochrome c4 Y89_2997 IPR036909 Y89_2997 Y89_2998 IPR004925 HpaB/PvcC/4-BUDH Y89_2998 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_2998 IPR024674 HpaB/PvcC/4-BUDH N-terminal Y89_2998 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein Y89_2998 IPR024719 HpaB/PvcC/4-BUDH C-terminal Y89_2998 IPR036250 Y89_2998 Y89_2999 IPR003819 Taurine catabolism dioxygenase TauD/TfdA Y89_3000 IPR007817 Pyoverdine biosynthesis Y89_3000 IPR017133 Pyoverdine chromophore biosynthesis protein PvcA Y89_3001 IPR006034 Asparaginase/glutaminase Y89_3001 IPR020827 Asparaginase/glutaminase, active site 1 Y89_3001 IPR027473 L-asparaginase, C-terminal domain Y89_3001 IPR027474 L-asparaginase, N-terminal Y89_3001 IPR027475 Asparaginase/glutaminase, active site 2 Y89_3001 IPR036152 Y89_3001 Y89_3001 IPR037152 Y89_3001 Y89_3002 IPR001463 Sodium:alanine symporter Y89_3004 IPR001100 Y89_3004 Y89_3004 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y89_3004 IPR006258 Dihydrolipoamide dehydrogenase Y89_3004 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Y89_3004 IPR016156 FAD/NAD-linked reductase, dimerisation domain Y89_3004 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_3004 IPR036188 Y89_3004 Y89_3005 IPR000089 Biotin/lipoyl attachment Y89_3005 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Y89_3005 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Y89_3005 IPR004167 E3 binding Y89_3005 IPR011053 Single hybrid motif Y89_3005 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_3005 IPR036625 Y89_3005 Y89_3006 IPR005475 Transketolase-like, pyrimidine-binding domain Y89_3006 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Y89_3006 IPR029061 Thiamin diphosphate-binding fold Y89_3006 IPR033248 Y89_3006 Y89_3007 IPR001017 Dehydrogenase, E1 component Y89_3007 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain Y89_3007 IPR029061 Thiamin diphosphate-binding fold Y89_3009 IPR000485 AsnC-type HTH domain Y89_3009 IPR011008 Dimeric alpha-beta barrel Y89_3009 IPR019887 Transcription regulator AsnC-type, C-terminal Y89_3009 IPR019888 Transcription regulator AsnC-type Y89_3009 IPR036388 Y89_3009 Y89_3009 IPR036390 Y89_3009 Y89_3011 IPR001631 DNA topoisomerase I Y89_3011 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_3011 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type Y89_3011 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type Y89_3011 IPR035447 Y89_3011 Y89_3012 IPR003953 FAD binding domain Y89_3012 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Y89_3012 IPR036188 Y89_3012 Y89_3013 IPR002656 Acyltransferase 3 Y89_3014 IPR004268 Flagellin assembly, membrane protein MviN Y89_3016 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Y89_3017 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Y89_3018 IPR001547 Glycoside hydrolase, family 5 Y89_3018 IPR017853 Glycoside hydrolase, superfamily Y89_3019 IPR001296 Glycosyl transferase, family 1 Y89_3020 IPR032807 Y89_3020 Y89_3021 IPR003715 Polysaccharide export protein Y89_3022 IPR029044 Nucleotide-diphospho-sugar transferases Y89_3023 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal Y89_3023 IPR005835 Nucleotidyl transferase Y89_3023 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Y89_3023 IPR011051 RmlC-like cupin domain Y89_3023 IPR014710 RmlC-like jelly roll fold Y89_3023 IPR029044 Nucleotide-diphospho-sugar transferases Y89_3024 IPR003362 Bacterial sugar transferase Y89_3024 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ Y89_3024 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Y89_3024 IPR036291 Y89_3024 Y89_3025 IPR023346 Lysozyme-like domain Y89_3026 IPR005163 3-alpha domain Y89_3026 IPR005302 Molybdenum cofactor sulfurase, C-terminal Y89_3026 IPR011037 Pyruvate kinase-like, insert domain Y89_3027 IPR001466 Beta-lactamase-related Y89_3027 IPR012338 Beta-lactamase/transpeptidase-like Y89_3028 IPR009057 Homeodomain-like Y89_3028 IPR018060 DNA binding HTH domain, AraC-type Y89_3028 IPR032687 Y89_3028 Y89_3030 IPR001584 Integrase, catalytic core Y89_3030 IPR009057 Homeodomain-like Y89_3030 IPR012337 Ribonuclease H-like domain Y89_3030 IPR036397 Y89_3030 Y89_3033 IPR009057 Homeodomain-like Y89_3033 IPR025736 PucR C-terminal helix-turn-helix domain Y89_3034 IPR008775 Phytanoyl-CoA dioxygenase Y89_3035 IPR015943 WD40/YVTN repeat-like-containing domain Y89_3035 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain Y89_3036 IPR001036 Acriflavin resistance protein Y89_3036 IPR004869 Membrane transport protein, MMPL domain Y89_3037 IPR010727 Protein of unknown function DUF1302 Y89_3038 IPR010752 Protein of unknown function DUF1329 Y89_3040 IPR006076 FAD dependent oxidoreductase Y89_3040 IPR036188 Y89_3040 Y89_3041 IPR008775 Phytanoyl-CoA dioxygenase Y89_3042 IPR001647 DNA-binding HTH domain, TetR-type Y89_3042 IPR009057 Homeodomain-like Y89_3043 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II Y89_3043 IPR020946 Flavin monooxygenase-like Y89_3043 IPR036188 Y89_3043 Y89_3044 IPR000073 Alpha/beta hydrolase fold-1 Y89_3044 IPR029058 Alpha/Beta hydrolase fold Y89_3045 IPR001670 Alcohol dehydrogenase, iron-type Y89_3045 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Y89_3046 IPR002293 Amino acid/polyamine transporter I Y89_3046 IPR004841 Amino acid permease/ SLC12A domain Y89_3047 IPR015590 Aldehyde dehydrogenase domain Y89_3047 IPR016161 Aldehyde/histidinol dehydrogenase Y89_3047 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_3047 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_3047 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_3048 IPR005814 Aminotransferase class-III Y89_3048 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_3048 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_3048 IPR015424 Pyridoxal phosphate-dependent transferase Y89_3049 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Y89_3049 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_3049 IPR013328 Dehydrogenase, multihelical Y89_3049 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type Y89_3049 IPR036291 Y89_3049 Y89_3051 IPR001734 Sodium/solute symporter Y89_3051 IPR018212 Sodium/solute symporter, conserved site Y89_3051 IPR038377 Y89_3051 Y89_3052 IPR007436 Protein of unknown function DUF485 Y89_3053 IPR000873 AMP-dependent synthetase/ligase Y89_3053 IPR020845 AMP-binding, conserved site Y89_3053 IPR025110 AMP-binding enzyme C-terminal domain Y89_3054 IPR002347 Glucose/ribitol dehydrogenase Y89_3054 IPR036291 Y89_3054 Y89_3055 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_3055 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_3055 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_3055 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_3055 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_3055 IPR036250 Y89_3055 Y89_3055 IPR037069 Y89_3055 Y89_3057 IPR002575 Aminoglycoside phosphotransferase Y89_3057 IPR011009 Protein kinase-like domain Y89_3058 IPR000014 PAS domain Y89_3058 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_3058 IPR002197 DNA binding HTH domain, Fis-type Y89_3058 IPR003593 AAA+ ATPase domain Y89_3058 IPR009057 Homeodomain-like Y89_3058 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal Y89_3058 IPR013656 PAS fold-4 Y89_3058 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_3058 IPR025944 Sigma-54 interaction domain, conserved site Y89_3058 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3058 IPR035965 Y89_3058 Y89_3060 IPR003399 Mammalian cell entry-related Y89_3061 IPR007498 Paraquat-inducible protein A Y89_3062 IPR015590 Aldehyde dehydrogenase domain Y89_3062 IPR016161 Aldehyde/histidinol dehydrogenase Y89_3062 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_3062 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_3063 IPR009645 Uncharacterised conserved protein GguC Y89_3063 IPR036663 Y89_3063 Y89_3064 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Y89_3064 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Y89_3064 IPR029017 Enolase N-terminal domain-like Y89_3064 IPR029065 Enolase C-terminal domain-like Y89_3064 IPR036849 Y89_3064 Y89_3065 IPR011701 Major facilitator superfamily Y89_3065 IPR036259 Y89_3065 Y89_3066 IPR005318 Outer membrane porin, bacterial Y89_3066 IPR023614 Porin domain Y89_3067 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA Y89_3068 IPR006680 Amidohydrolase 1 Y89_3068 IPR032466 Y89_3068 Y89_3069 IPR011701 Major facilitator superfamily Y89_3069 IPR036259 Y89_3069 Y89_3070 IPR005064 Bordetella uptake gene Y89_3071 IPR009936 Protein of unknown function DUF1468 Y89_3072 IPR002823 Protein of unknown function DUF112, transmembrane Y89_3073 IPR000847 Transcription regulator HTH, LysR Y89_3073 IPR005119 LysR, substrate-binding Y89_3073 IPR036388 Y89_3073 Y89_3073 IPR036390 Y89_3073 Y89_3075 IPR001320 Ionotropic glutamate receptor Y89_3075 IPR001638 Extracellular solute-binding protein, family 3 Y89_3076 IPR000515 MetI-like domain Y89_3076 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_3076 IPR035906 Y89_3076 Y89_3077 IPR000515 MetI-like domain Y89_3077 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_3077 IPR035906 Y89_3077 Y89_3078 IPR015025 Domain of unknown function DUF1911 Y89_3078 IPR028983 PA2201-like, C-terminal Y89_3078 IPR028997 PA2201-like, N-terminal Y89_3079 IPR001633 EAL domain Y89_3079 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain Y89_3079 IPR035919 Y89_3079 Y89_3080 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Y89_3080 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Y89_3080 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_3080 IPR013328 Dehydrogenase, multihelical Y89_3080 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type Y89_3080 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Y89_3080 IPR036291 Y89_3080 Y89_3081 IPR007138 Antibiotic biosynthesis monooxygenase-like domain Y89_3081 IPR011008 Dimeric alpha-beta barrel Y89_3082 IPR011032 GroES (chaperonin 10)-like Y89_3082 IPR013149 Alcohol dehydrogenase, C-terminal Y89_3082 IPR020843 Polyketide synthase, enoylreductase Y89_3082 IPR036291 Y89_3082 Y89_3083 IPR001647 DNA-binding HTH domain, TetR-type Y89_3083 IPR009057 Homeodomain-like Y89_3083 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Y89_3083 IPR036271 Y89_3083 Y89_3084 IPR006076 FAD dependent oxidoreductase Y89_3084 IPR036188 Y89_3084 Y89_3085 IPR007419 BFD-like [2Fe-2S]-binding domain Y89_3085 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B Y89_3085 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_3085 IPR036188 Y89_3085 Y89_3086 IPR036010 Y89_3086 Y89_3087 IPR000644 CBS domain Y89_3088 IPR005165 Anthrax toxin, edema factor, central Y89_3088 IPR035099 Y89_3088 Y89_3088 IPR037017 Y89_3088 Y89_3089 IPR019626 Stress-induced protein, KGG, repeat Y89_3090 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Y89_3090 IPR029045 ClpP/crotonase-like domain Y89_3091 IPR007251 Low affinity iron permease, Fet4 Y89_3092 IPR006336 Glutamate--cysteine ligase, GCS2 Y89_3092 IPR011793 Carboxylate-amine ligase, predicted Y89_3092 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_3093 IPR016084 Haem oxygenase-like, multi-helical Y89_3094 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Y89_3094 IPR007848 Methyltransferase small domain Y89_3094 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3096 IPR009698 Protein of unknown function DUF1282 Y89_3097 IPR000014 PAS domain Y89_3097 IPR001610 PAC motif Y89_3097 IPR001789 Signal transduction response regulator, receiver domain Y89_3097 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_3097 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_3097 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_3097 IPR011006 CheY-like superfamily Y89_3097 IPR035965 Y89_3097 Y89_3097 IPR036097 Y89_3097 Y89_3097 IPR036890 Y89_3097 Y89_3102 IPR021309 Protein of unknown function DUF2892 Y89_3103 IPR008007 Peptidase M42 Y89_3103 IPR023367 Peptidase M42, domain 2 Y89_3104 IPR012312 Haemerythrin/HHE cation-binding motif Y89_3105 IPR027379 Cardiolipin synthase N-terminal Y89_3106 IPR009078 Ferritin-like superfamily Y89_3106 IPR011971 Conserved hypothetical protein CHP02284 Y89_3106 IPR012347 Ferritin-related Y89_3106 IPR016920 Uncharacterised conserved protein UCP029477 Y89_3106 IPR019052 Domain of unknown function DUF2383 Y89_3107 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain Y89_3107 IPR002471 Peptidase S9, serine active site Y89_3107 IPR029058 Alpha/Beta hydrolase fold Y89_3108 IPR021519 Protein of unknown function DUF3182 Y89_3110 IPR021898 Protein of unknown function DUF3509 Y89_3111 IPR001296 Glycosyl transferase, family 1 Y89_3111 IPR011835 Glycogen/starch synthase, ADP-glucose type Y89_3111 IPR013534 Starch synthase, catalytic domain Y89_3112 IPR004193 Glycoside hydrolase, family 13, N-terminal Y89_3112 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Y89_3112 IPR012768 Malto-oligosyltrehalose trehalohydrolase Y89_3112 IPR013783 Immunoglobulin-like fold Y89_3112 IPR014756 Immunoglobulin E-set Y89_3112 IPR017853 Glycoside hydrolase, superfamily Y89_3112 IPR022567 Domain of unknown function DUF3459 Y89_3113 IPR003385 Glycoside hydrolase, family 77 Y89_3113 IPR017853 Glycoside hydrolase, superfamily Y89_3114 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Y89_3114 IPR012767 Malto-oligosyltrehalose synthase Y89_3114 IPR017853 Glycoside hydrolase, superfamily Y89_3115 IPR021327 Protein of unknown function DUF2934 Y89_3116 IPR004193 Glycoside hydrolase, family 13, N-terminal Y89_3116 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Y89_3116 IPR011837 Glycogen debranching enzyme, GlgX type Y89_3116 IPR013780 Glycosyl hydrolase, family 13, all-beta Y89_3116 IPR013783 Immunoglobulin-like fold Y89_3116 IPR014756 Immunoglobulin E-set Y89_3116 IPR017853 Glycoside hydrolase, superfamily Y89_3117 IPR000644 CBS domain Y89_3118 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Y89_3118 IPR011032 GroES (chaperonin 10)-like Y89_3118 IPR013149 Alcohol dehydrogenase, C-terminal Y89_3118 IPR013154 Alcohol dehydrogenase GroES-like Y89_3118 IPR020843 Polyketide synthase, enoylreductase Y89_3118 IPR036291 Y89_3118 Y89_3119 IPR002763 Protein of unknown function DUF72 Y89_3119 IPR036520 Y89_3119 Y89_3120 IPR005135 Endonuclease/exonuclease/phosphatase Y89_3120 IPR036691 Y89_3120 Y89_3121 IPR001736 Phospholipase D/Transphosphatidylase Y89_3121 IPR025202 Phospholipase D-like domain Y89_3121 IPR030872 Y89_3121 Y89_3122 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Y89_3123 IPR004193 Glycoside hydrolase, family 13, N-terminal Y89_3123 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Y89_3123 IPR006048 Alpha-amylase, C-terminal all beta Y89_3123 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB Y89_3123 IPR013780 Glycosyl hydrolase, family 13, all-beta Y89_3123 IPR013783 Immunoglobulin-like fold Y89_3123 IPR014756 Immunoglobulin E-set Y89_3123 IPR017853 Glycoside hydrolase, superfamily Y89_3123 IPR037439 Y89_3123 Y89_3124 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Y89_3124 IPR011009 Protein kinase-like domain Y89_3124 IPR012810 Trehalose synthase/alpha-amylase, N-terminal Y89_3124 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain Y89_3124 IPR013780 Glycosyl hydrolase, family 13, all-beta Y89_3124 IPR017853 Glycoside hydrolase, superfamily Y89_3124 IPR032091 Y89_3124 Y89_3125 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Y89_3125 IPR013780 Glycosyl hydrolase, family 13, all-beta Y89_3125 IPR013783 Immunoglobulin-like fold Y89_3125 IPR017853 Glycoside hydrolase, superfamily Y89_3125 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S Y89_3125 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase Y89_3126 IPR006164 Ku70/Ku80 beta-barrel domain Y89_3126 IPR009187 Predicted Ku, prokaryotic type Y89_3126 IPR016194 SPOC like C-terminal domain Y89_3128 IPR003416 MgtC/SapB/SrpB transporter Y89_3130 IPR002226 Catalase haem-binding site Y89_3130 IPR002818 ThiJ/PfpI Y89_3130 IPR010582 Catalase immune-responsive domain Y89_3130 IPR011614 Catalase core domain Y89_3130 IPR018028 Catalase, mono-functional, haem-containing Y89_3130 IPR020835 Catalase-like domain Y89_3130 IPR024708 Catalase active site Y89_3130 IPR024712 Catalase, mono-functional, haem-containing, clade 2 Y89_3130 IPR029062 Class I glutamine amidotransferase-like Y89_3130 IPR037060 Y89_3130 Y89_3131 IPR019626 Stress-induced protein, KGG, repeat Y89_3134 IPR000811 Glycosyl transferase, family 35 Y89_3134 IPR011833 Glycogen/starch/alpha-glucan phosphorylase Y89_3134 IPR035090 Y89_3134 Y89_3135 IPR019650 Protein of unknown function DUF2513 Y89_3137 IPR002347 Glucose/ribitol dehydrogenase Y89_3137 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_3137 IPR036291 Y89_3137 Y89_3138 IPR008136 CinA, C-terminal Y89_3138 IPR036653 Y89_3138 Y89_3139 IPR000518 Metallothionein, family 14, prokaryote Y89_3139 IPR017854 Metallothionein domain Y89_3140 IPR027379 Cardiolipin synthase N-terminal Y89_3141 IPR012309 DNA ligase, ATP-dependent, C-terminal Y89_3141 IPR012310 DNA ligase, ATP-dependent, central Y89_3141 IPR012340 Nucleic acid-binding, OB-fold Y89_3141 IPR014143 DNA ligase D Y89_3141 IPR014144 DNA ligase D, 3'-phosphoesterase domain Y89_3141 IPR014145 DNA polymerase LigD, polymerase domain Y89_3141 IPR014146 DNA polymerase LigD, ligase domain Y89_3142 IPR001789 Signal transduction response regulator, receiver domain Y89_3142 IPR011006 CheY-like superfamily Y89_3145 IPR006153 Cation/H+ exchanger Y89_3146 IPR025419 Domain of unknown function DUF4142 Y89_3147 IPR001633 EAL domain Y89_3147 IPR035919 Y89_3147 Y89_3148 IPR001829 Pili assembly chaperone, bacterial Y89_3148 IPR008962 PapD-like Y89_3148 IPR013783 Immunoglobulin-like fold Y89_3148 IPR016147 PapD, N-terminal, bacterial Y89_3148 IPR016148 Pili assembly chaperone, C-terminal domain Y89_3148 IPR036316 Y89_3148 Y89_3149 IPR000259 Fimbrial-type adhesion domain Y89_3149 IPR008966 Adhesion domain Y89_3149 IPR011228 Uncharacterised conserved protein UCP029766 Y89_3149 IPR036937 Y89_3149 Y89_3150 IPR000015 Outer membrane usher protein Y89_3150 IPR018030 Fimbrial membrane usher, conserved site Y89_3150 IPR025885 PapC, N-terminal domain Y89_3150 IPR025949 PapC-like, C-terminal domain Y89_3150 IPR037224 Y89_3150 Y89_3151 IPR001829 Pili assembly chaperone, bacterial Y89_3151 IPR008962 PapD-like Y89_3151 IPR013783 Immunoglobulin-like fold Y89_3151 IPR016147 PapD, N-terminal, bacterial Y89_3151 IPR016148 Pili assembly chaperone, C-terminal domain Y89_3151 IPR036316 Y89_3151 Y89_3152 IPR000259 Fimbrial-type adhesion domain Y89_3152 IPR008966 Adhesion domain Y89_3152 IPR036937 Y89_3152 Y89_3153 IPR002500 Phosphoadenosine phosphosulphate reductase Y89_3153 IPR021845 Protein of unknown function DUF3440 Y89_3154 IPR003115 ParB/Sulfiredoxin Y89_3154 IPR036086 Y89_3154 Y89_3155 IPR015590 Aldehyde dehydrogenase domain Y89_3155 IPR016161 Aldehyde/histidinol dehydrogenase Y89_3155 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_3155 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_3156 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Y89_3156 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Y89_3156 IPR012132 Glucose-methanol-choline oxidoreductase Y89_3156 IPR036188 Y89_3156 Y89_3157 IPR000847 Transcription regulator HTH, LysR Y89_3157 IPR005119 LysR, substrate-binding Y89_3157 IPR036388 Y89_3157 Y89_3157 IPR036390 Y89_3157 Y89_3158 IPR006694 Fatty acid hydroxylase Y89_3158 IPR019587 Polyketide cyclase/dehydrase Y89_3158 IPR023393 START-like domain Y89_3159 IPR000847 Transcription regulator HTH, LysR Y89_3159 IPR005119 LysR, substrate-binding Y89_3159 IPR036388 Y89_3159 Y89_3159 IPR036390 Y89_3159 Y89_3160 IPR032710 Y89_3160 Y89_3160 IPR037401 Y89_3160 Y89_3161 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Y89_3161 IPR011032 GroES (chaperonin 10)-like Y89_3161 IPR013149 Alcohol dehydrogenase, C-terminal Y89_3161 IPR013154 Alcohol dehydrogenase GroES-like Y89_3161 IPR020843 Polyketide synthase, enoylreductase Y89_3161 IPR036291 Y89_3161 Y89_3162 IPR021245 Protein of unknown function DUF2790 Y89_3163 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site Y89_3163 IPR004026 Ada DNA repair, metal-binding Y89_3163 IPR009057 Homeodomain-like Y89_3163 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding Y89_3163 IPR016221 Bifunctional regulatory protein Ada Y89_3163 IPR018060 DNA binding HTH domain, AraC-type Y89_3163 IPR035451 Y89_3163 Y89_3163 IPR036217 Y89_3163 Y89_3163 IPR036388 Y89_3163 Y89_3163 IPR036631 Y89_3163 Y89_3165 IPR009906 Protein of unknown function DUF1445 Y89_3165 IPR016938 Uncharacterised protein family UPF0317 Y89_3165 IPR038021 Y89_3165 Y89_3166 IPR000847 Transcription regulator HTH, LysR Y89_3166 IPR005119 LysR, substrate-binding Y89_3166 IPR036388 Y89_3166 Y89_3166 IPR036390 Y89_3166 Y89_3167 IPR005829 Sugar transporter, conserved site Y89_3167 IPR011701 Major facilitator superfamily Y89_3167 IPR036259 Y89_3167 Y89_3168 IPR005318 Outer membrane porin, bacterial Y89_3168 IPR023614 Porin domain Y89_3169 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF Y89_3169 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Y89_3170 IPR003833 Allophanate hydrolase subunit 1 Y89_3170 IPR029000 Cyclophilin-like domain Y89_3171 IPR003778 Allophanate hydrolase subunit 2 Y89_3171 IPR029000 Cyclophilin-like domain Y89_3172 IPR025419 Domain of unknown function DUF4142 Y89_3173 IPR000399 TPP-binding enzyme, conserved site Y89_3173 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Y89_3173 IPR012000 Thiamine pyrophosphate enzyme, central domain Y89_3173 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Y89_3173 IPR029035 DHS-like NAD/FAD-binding domain Y89_3173 IPR029061 Thiamin diphosphate-binding fold Y89_3174 IPR005560 Protein of unknown function DUF326 Y89_3175 IPR002347 Glucose/ribitol dehydrogenase Y89_3175 IPR036291 Y89_3175 Y89_3176 IPR002168 Lipase, GDXG, active site Y89_3176 IPR013094 Alpha/beta hydrolase fold-3 Y89_3176 IPR029058 Alpha/Beta hydrolase fold Y89_3176 IPR033140 Y89_3176 Y89_3177 IPR036188 Y89_3177 Y89_3178 IPR009057 Homeodomain-like Y89_3178 IPR018060 DNA binding HTH domain, AraC-type Y89_3178 IPR018062 HTH domain AraC-type, conserved site Y89_3178 IPR020449 Transcription regulator HTH, AraC- type Y89_3178 IPR032687 Y89_3178 Y89_3180 IPR006860 FecR protein Y89_3180 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_3180 IPR032623 Y89_3180 Y89_3181 IPR007627 RNA polymerase sigma-70 region 2 Y89_3181 IPR007630 RNA polymerase sigma-70 region 4 Y89_3181 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_3181 IPR013325 RNA polymerase sigma factor, region 2 Y89_3181 IPR014284 RNA polymerase sigma-70 like domain Y89_3181 IPR036388 Y89_3181 Y89_3182 IPR011701 Major facilitator superfamily Y89_3182 IPR036259 Y89_3182 Y89_3183 IPR011701 Major facilitator superfamily Y89_3183 IPR036259 Y89_3183 Y89_3184 IPR011251 Luciferase-like domain Y89_3184 IPR036661 Y89_3184 Y89_3185 IPR000531 TonB-dependent receptor, beta-barrel Y89_3185 IPR011662 Secretin/TonB, short N-terminal Y89_3185 IPR012910 TonB-dependent receptor, plug Y89_3185 IPR036942 Y89_3185 Y89_3185 IPR037066 Y89_3185 Y89_3186 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3188 IPR000073 Alpha/beta hydrolase fold-1 Y89_3188 IPR000639 Epoxide hydrolase-like Y89_3188 IPR029058 Alpha/Beta hydrolase fold Y89_3189 IPR000391 Aromatic-ring-hydroxylating dioxygenase, beta subunit Y89_3189 IPR032710 Y89_3189 Y89_3190 IPR001962 Asparagine synthase Y89_3190 IPR006426 Asparagine synthase, glutamine-hydrolyzing Y89_3190 IPR017932 Glutamine amidotransferase type 2 domain Y89_3190 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_3191 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit Y89_3191 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain Y89_3191 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site Y89_3191 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Y89_3191 IPR036922 Y89_3191 Y89_3192 IPR000485 AsnC-type HTH domain Y89_3192 IPR011008 Dimeric alpha-beta barrel Y89_3192 IPR019887 Transcription regulator AsnC-type, C-terminal Y89_3192 IPR019888 Transcription regulator AsnC-type Y89_3192 IPR036388 Y89_3192 Y89_3192 IPR036390 Y89_3192 Y89_3193 IPR007325 Kynurenine formamidase Y89_3193 IPR017484 Kynurenine formamidase, bacteria Y89_3193 IPR037175 Y89_3193 Y89_3194 IPR000192 Aminotransferase class V domain Y89_3194 IPR010111 Kynureninase Y89_3194 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_3194 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_3194 IPR015424 Pyridoxal phosphate-dependent transferase Y89_3195 IPR002293 Amino acid/polyamine transporter I Y89_3195 IPR004840 Amino acid permease, conserved site Y89_3195 IPR004841 Amino acid permease/ SLC12A domain Y89_3196 IPR036909 Y89_3196 Y89_3197 IPR036909 Y89_3197 Y89_3198 IPR000847 Transcription regulator HTH, LysR Y89_3198 IPR005119 LysR, substrate-binding Y89_3198 IPR036388 Y89_3198 Y89_3198 IPR036390 Y89_3198 Y89_3201 IPR001110 Uncharacterised protein family UPF0012, conserved site Y89_3201 IPR003010 Carbon-nitrogen hydrolase Y89_3201 IPR036526 Y89_3201 Y89_3202 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin Y89_3202 IPR026030 Purine-cytosine permease Y89_3202 IPR038271 Y89_3202 Y89_3203 IPR000014 PAS domain Y89_3203 IPR000160 GGDEF domain Y89_3203 IPR001633 EAL domain Y89_3203 IPR007892 CHASE4 Y89_3203 IPR029787 Nucleotide cyclase Y89_3203 IPR035919 Y89_3203 Y89_3203 IPR035965 Y89_3203 Y89_3204 IPR000640 Translation elongation factor EFG, V domain Y89_3204 IPR000795 Elongation factor, GTP-binding domain Y89_3204 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Y89_3204 IPR004540 Translation elongation factor EFG/EF2 Y89_3204 IPR005225 Small GTP-binding protein domain Y89_3204 IPR005517 Translation elongation factor EFG/EF2, domain IV Y89_3204 IPR009000 Translation protein, beta-barrel domain Y89_3204 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_3204 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_3204 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3204 IPR031157 Y89_3204 Y89_3204 IPR035647 Y89_3204 Y89_3205 IPR000531 TonB-dependent receptor, beta-barrel Y89_3205 IPR012910 TonB-dependent receptor, plug Y89_3205 IPR037066 Y89_3205 Y89_3206 IPR003696 Carbamoyltransferase Y89_3206 IPR031730 Y89_3206 Y89_3206 IPR038152 Y89_3206 Y89_3207 IPR024989 Major facilitator superfamily associated domain Y89_3207 IPR026032 Phenylproprionate/maltose permease Y89_3207 IPR036259 Y89_3207 Y89_3208 IPR006439 HAD hydrolase, subfamily IA Y89_3208 IPR023198 Phosphoglycolate phosphatase, domain 2 Y89_3208 IPR023214 HAD-like domain Y89_3208 IPR036412 Y89_3208 Y89_3209 IPR003848 Domain of unknown function DUF218 Y89_3209 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_3210 IPR001117 Multicopper oxidase, type 1 Y89_3210 IPR002355 Multicopper oxidase, copper-binding site Y89_3210 IPR006376 Copper-resistance protein CopA Y89_3210 IPR008972 Cupredoxin Y89_3210 IPR011706 Multicopper oxidase, type 2 Y89_3210 IPR011707 Multicopper oxidase, type 3 Y89_3210 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Y89_3210 IPR033138 Y89_3210 Y89_3211 IPR007939 Copper resistance B precursor Y89_3212 IPR018712 Domain of unknown function DUF2235 Y89_3212 IPR029058 Alpha/Beta hydrolase fold Y89_3213 IPR000192 Aminotransferase class V domain Y89_3213 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_3213 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_3213 IPR015424 Pyridoxal phosphate-dependent transferase Y89_3213 IPR016454 Cysteine desulfurase, NifS Y89_3213 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site Y89_3214 IPR003439 ABC transporter-like Y89_3214 IPR003593 AAA+ ATPase domain Y89_3214 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Y89_3214 IPR017871 ABC transporter, conserved site Y89_3214 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3215 IPR000515 MetI-like domain Y89_3215 IPR035906 Y89_3215 Y89_3216 IPR000515 MetI-like domain Y89_3216 IPR035906 Y89_3216 Y89_3217 IPR000914 Bacterial extracellular solute-binding protein, family 5 Y89_3217 IPR030678 Y89_3217 Y89_3218 IPR000531 TonB-dependent receptor, beta-barrel Y89_3218 IPR011662 Secretin/TonB, short N-terminal Y89_3218 IPR012910 TonB-dependent receptor, plug Y89_3218 IPR037066 Y89_3218 Y89_3219 IPR000847 Transcription regulator HTH, LysR Y89_3219 IPR005119 LysR, substrate-binding Y89_3219 IPR036388 Y89_3219 Y89_3219 IPR036390 Y89_3219 Y89_3220 IPR011701 Major facilitator superfamily Y89_3220 IPR036259 Y89_3220 Y89_3221 IPR000847 Transcription regulator HTH, LysR Y89_3221 IPR005119 LysR, substrate-binding Y89_3221 IPR036388 Y89_3221 Y89_3221 IPR036390 Y89_3221 Y89_3222 IPR001765 Carbonic anhydrase Y89_3222 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site Y89_3222 IPR036874 Y89_3222 Y89_3223 IPR003712 Cyanate lyase, C-terminal Y89_3223 IPR008076 Cyanate hydratase Y89_3223 IPR010982 Lambda repressor-like, DNA-binding domain Y89_3223 IPR036581 Y89_3223 Y89_3224 IPR006860 FecR protein Y89_3224 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_3224 IPR032623 Y89_3224 Y89_3225 IPR007627 RNA polymerase sigma-70 region 2 Y89_3225 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_3225 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_3225 IPR013325 RNA polymerase sigma factor, region 2 Y89_3225 IPR014284 RNA polymerase sigma-70 like domain Y89_3225 IPR036388 Y89_3225 Y89_3227 IPR007138 Antibiotic biosynthesis monooxygenase-like domain Y89_3227 IPR011008 Dimeric alpha-beta barrel Y89_3231 IPR021251 Protein of unknown function DUF2793 Y89_3232 IPR032876 Y89_3232 Y89_3234 IPR011928 Bacteriophage phiJL001, Gp84 Y89_3234 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal Y89_3234 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal Y89_3238 IPR013491 Caudovirus, tape measure, N-terminal Y89_3240 IPR016893 Protein of unknown function UCP028589 Y89_3243 IPR009752 Bacteriophage Mu, Gp36 Y89_3244 IPR018774 Bacteriophage Mu, GpT Y89_3246 IPR012106 Bacteriophage Mu, Gp32 Y89_3247 IPR006522 Phage virion morphogensis protein Y89_3248 IPR006528 Phage head morphogenesis domain Y89_3249 IPR009279 Protein of unknown function DUF935 Y89_3250 IPR012036 Bacteriophage Mu, Gp28 Y89_3251 IPR021874 Bacteriophage Mu, Gp27 Y89_3252 IPR036390 Y89_3252 Y89_3253 IPR020269 Bacteriophage Mu, Gp25 Y89_3255 IPR008258 Lytic transglycosylase-like SLT domain Y89_3255 IPR023346 Lysozyme-like domain Y89_3257 IPR025140 Protein of unknown function DUF4063 Y89_3259 IPR010982 Lambda repressor-like, DNA-binding domain Y89_3259 IPR026365 Phage-associated protein, BcepMu gp16 family Y89_3262 IPR036388 Y89_3262 Y89_3262 IPR036390 Y89_3262 Y89_3264 IPR001584 Integrase, catalytic core Y89_3264 IPR012337 Ribonuclease H-like domain Y89_3264 IPR036397 Y89_3264 Y89_3265 IPR003593 AAA+ ATPase domain Y89_3265 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3269 IPR021505 Bacteriophage B3, Orf6 Y89_3270 IPR016868 Bacteriophage B3, Orf5 Y89_3270 IPR024498 Domain of unknown function DUF2786 Y89_3273 IPR009363 Bacteriophage Mu, Gp16 Y89_3275 IPR009057 Homeodomain-like Y89_3275 IPR014875 Mor transcription activator Y89_3276 IPR009057 Homeodomain-like Y89_3276 IPR009594 Transcription regulator HTH, AraC, N-terminal Y89_3276 IPR018060 DNA binding HTH domain, AraC-type Y89_3276 IPR018062 HTH domain AraC-type, conserved site Y89_3278 IPR002696 Putative membrane protein insertion efficiency factor Y89_3279 IPR002931 Transglutaminase-like Y89_3279 IPR024618 Domain of unknown function DUF3857 Y89_3279 IPR038765 Y89_3279 Y89_3280 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Y89_3280 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Y89_3280 IPR020103 Pseudouridine synthase, catalytic domain Y89_3281 IPR001991 Sodium:dicarboxylate symporter Y89_3281 IPR023025 Serine/threonine transporter SstT Y89_3281 IPR036458 Y89_3281 Y89_3282 IPR002293 Amino acid/polyamine transporter I Y89_3282 IPR004841 Amino acid permease/ SLC12A domain Y89_3283 IPR008146 Glutamine synthetase, catalytic domain Y89_3283 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_3283 IPR027303 Glutamine synthetase, glycine-rich site Y89_3283 IPR036651 Y89_3283 Y89_3284 IPR011606 Branched-chain amino acid transport, permease Y89_3285 IPR008407 Branched-chain amino acid transport, AzlD Y89_3286 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3287 IPR000399 TPP-binding enzyme, conserved site Y89_3287 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Y89_3287 IPR012000 Thiamine pyrophosphate enzyme, central domain Y89_3287 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Y89_3287 IPR029035 DHS-like NAD/FAD-binding domain Y89_3287 IPR029061 Thiamin diphosphate-binding fold Y89_3288 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3289 IPR007037 Siderophore-interacting protein Y89_3289 IPR013113 FAD-binding 9, siderophore-interacting Y89_3289 IPR017938 Riboflavin synthase-like beta-barrel Y89_3289 IPR039261 Y89_3289 Y89_3290 IPR000524 Transcription regulator HTH, GntR Y89_3290 IPR004839 Aminotransferase, class I/classII Y89_3290 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_3290 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_3290 IPR015424 Pyridoxal phosphate-dependent transferase Y89_3290 IPR036388 Y89_3290 Y89_3290 IPR036390 Y89_3290 Y89_3291 IPR009506 Protein of unknown function DUF1127 Y89_3293 IPR017162 Uncharacterised conserved protein UCP037266 Y89_3293 IPR036388 Y89_3293 Y89_3293 IPR036390 Y89_3293 Y89_3294 IPR000485 AsnC-type HTH domain Y89_3294 IPR011008 Dimeric alpha-beta barrel Y89_3294 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Y89_3294 IPR019887 Transcription regulator AsnC-type, C-terminal Y89_3294 IPR019888 Transcription regulator AsnC-type Y89_3294 IPR036388 Y89_3294 Y89_3294 IPR036390 Y89_3294 Y89_3296 IPR016833 Putative sodium bile acid cotransporter Y89_3296 IPR038770 Y89_3296 Y89_3297 IPR001100 Y89_3297 Y89_3297 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y89_3297 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Y89_3297 IPR016156 FAD/NAD-linked reductase, dimerisation domain Y89_3297 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_3297 IPR036188 Y89_3297 Y89_3298 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_3298 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_3299 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type Y89_3299 IPR005835 Nucleotidyl transferase Y89_3299 IPR029044 Nucleotide-diphospho-sugar transferases Y89_3300 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Y89_3300 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_3300 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Y89_3300 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Y89_3300 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Y89_3300 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type Y89_3300 IPR036220 Y89_3300 Y89_3300 IPR036291 Y89_3300 Y89_3302 IPR001647 DNA-binding HTH domain, TetR-type Y89_3302 IPR009057 Homeodomain-like Y89_3302 IPR013572 Transcription regulator MAATS, C-terminal Y89_3302 IPR036271 Y89_3302 Y89_3303 IPR006143 RND efflux pump, membrane fusion protein Y89_3303 IPR032317 Y89_3303 Y89_3304 IPR001036 Acriflavin resistance protein Y89_3304 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Y89_3304 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_3306 IPR009722 SdiA-regulated Y89_3307 IPR000551 MerR-type HTH domain Y89_3307 IPR009061 DNA binding domain, putative Y89_3308 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_3308 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_3308 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_3308 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_3308 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_3308 IPR036250 Y89_3308 Y89_3308 IPR037069 Y89_3308 Y89_3309 IPR029045 ClpP/crotonase-like domain Y89_3309 IPR034733 Y89_3309 Y89_3310 IPR001753 Crotonase superfamily Y89_3310 IPR014748 Crontonase, C-terminal Y89_3310 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Y89_3310 IPR029045 ClpP/crotonase-like domain Y89_3311 IPR000089 Biotin/lipoyl attachment Y89_3311 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Y89_3311 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal Y89_3311 IPR005482 Biotin carboxylase, C-terminal Y89_3311 IPR011053 Single hybrid motif Y89_3311 IPR011054 Rudiment single hybrid motif Y89_3311 IPR013815 ATP-grasp fold, subdomain 1 Y89_3311 IPR016185 Pre-ATP-grasp domain Y89_3312 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site Y89_3312 IPR000891 Pyruvate carboxyltransferase Y89_3312 IPR013785 Aldolase-type TIM barrel Y89_3313 IPR005471 Transcription regulator IclR, N-terminal Y89_3313 IPR014757 Transcription regulator IclR, C-terminal Y89_3313 IPR029016 GAF domain-like Y89_3313 IPR036388 Y89_3313 Y89_3313 IPR036390 Y89_3313 Y89_3314 IPR005708 Homogentisate 1,2-dioxygenase Y89_3314 IPR011051 RmlC-like cupin domain Y89_3314 IPR014710 RmlC-like jelly roll fold Y89_3314 IPR022950 Homogentisate 1,2-dioxygenase, bacterial Y89_3315 IPR005959 Fumarylacetoacetase Y89_3315 IPR011234 Fumarylacetoacetase, C-terminal-related Y89_3315 IPR015377 Fumarylacetoacetase, N-terminal Y89_3315 IPR036462 Y89_3315 Y89_3315 IPR036663 Y89_3315 Y89_3316 IPR004045 Glutathione S-transferase, N-terminal Y89_3316 IPR005955 Maleylacetoacetate isomerase Y89_3316 IPR036249 Y89_3316 Y89_3316 IPR036282 Y89_3316 Y89_3317 IPR005829 Sugar transporter, conserved site Y89_3317 IPR011701 Major facilitator superfamily Y89_3317 IPR036259 Y89_3317 Y89_3318 IPR000014 PAS domain Y89_3318 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_3318 IPR002197 DNA binding HTH domain, Fis-type Y89_3318 IPR003593 AAA+ ATPase domain Y89_3318 IPR009057 Homeodomain-like Y89_3318 IPR013656 PAS fold-4 Y89_3318 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_3318 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_3318 IPR025944 Sigma-54 interaction domain, conserved site Y89_3318 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3318 IPR035965 Y89_3318 Y89_3320 IPR002347 Glucose/ribitol dehydrogenase Y89_3320 IPR011294 3-hydroxybutyrate dehydrogenase Y89_3320 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_3320 IPR036291 Y89_3320 Y89_3321 IPR006160 Short chain fatty acid transporter AtoE Y89_3322 IPR002155 Thiolase Y89_3322 IPR016039 Thiolase-like Y89_3322 IPR020610 Thiolase, active site Y89_3322 IPR020613 Thiolase, conserved site Y89_3322 IPR020615 Thiolase, acyl-enzyme intermediate active site Y89_3322 IPR020616 Thiolase, N-terminal Y89_3322 IPR020617 Thiolase, C-terminal Y89_3323 IPR004164 Coenzyme A transferase active site Y89_3323 IPR004165 Coenzyme A transferase family I Y89_3323 IPR012791 3-oxoacid CoA-transferase, subunit B Y89_3323 IPR037171 Y89_3323 Y89_3324 IPR004163 Coenzyme A transferase binding site Y89_3324 IPR004165 Coenzyme A transferase family I Y89_3324 IPR012792 3-oxoacid CoA-transferase, subunit A Y89_3324 IPR037171 Y89_3324 Y89_3325 IPR000847 Transcription regulator HTH, LysR Y89_3325 IPR005119 LysR, substrate-binding Y89_3325 IPR036388 Y89_3325 Y89_3325 IPR036390 Y89_3325 Y89_3326 IPR000873 AMP-dependent synthetase/ligase Y89_3326 IPR005914 Acetoacetyl-CoA synthase Y89_3326 IPR020845 AMP-binding, conserved site Y89_3326 IPR032387 Y89_3326 Y89_3327 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Y89_3327 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Y89_3328 IPR007351 Uncharacterised protein YjbR Y89_3328 IPR038056 Y89_3328 Y89_3329 IPR009467 Putative glycolipid-binding protein Y89_3330 IPR011701 Major facilitator superfamily Y89_3330 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily Y89_3330 IPR036259 Y89_3330 Y89_3331 IPR000014 PAS domain Y89_3331 IPR001789 Signal transduction response regulator, receiver domain Y89_3331 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_3331 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_3331 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_3331 IPR011006 CheY-like superfamily Y89_3331 IPR035965 Y89_3331 Y89_3331 IPR036097 Y89_3331 Y89_3331 IPR036890 Y89_3331 Y89_3332 IPR001670 Alcohol dehydrogenase, iron-type Y89_3332 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Y89_3333 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain Y89_3333 IPR029058 Alpha/Beta hydrolase fold Y89_3334 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Y89_3334 IPR006638 Elongator protein 3/MiaB/NifB Y89_3334 IPR007197 Radical SAM Y89_3334 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria Y89_3334 IPR013785 Aldolase-type TIM barrel Y89_3334 IPR017200 Radical SAM coenzyme PQQ biosynthesis protein E/heme D1 biosynthesis NirJ Y89_3334 IPR023885 4Fe4S-binding SPASM domain Y89_3335 IPR008792 Coenzyme PQQ synthesis D Y89_3335 IPR022479 Coenzyme PQQ synthesis D, bacteria Y89_3336 IPR004305 Thiaminase-2/PQQC Y89_3336 IPR011845 Coenzyme PQQ biosynthesis protein C Y89_3336 IPR016084 Haem oxygenase-like, multi-helical Y89_3337 IPR001279 Beta-lactamase-like Y89_3337 IPR011842 Coenzyme PQQ biosynthesis protein B Y89_3337 IPR036866 Y89_3337 Y89_3338 IPR011725 Coenzyme PQQ biosynthesis protein A Y89_3339 IPR015590 Aldehyde dehydrogenase domain Y89_3339 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_3339 IPR016161 Aldehyde/histidinol dehydrogenase Y89_3339 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_3339 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_3339 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_3340 IPR009056 Cytochrome c-like domain Y89_3340 IPR030991 Y89_3340 Y89_3340 IPR036909 Y89_3340 Y89_3341 IPR001479 Quinoprotein dehydrogenase, conserved site Y89_3341 IPR002372 Pyrrolo-quinoline quinone repeat Y89_3341 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily Y89_3341 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family Y89_3341 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Y89_3342 IPR001646 Pentapeptide repeat Y89_3343 IPR000792 Transcription regulator LuxR, C-terminal Y89_3343 IPR001789 Signal transduction response regulator, receiver domain Y89_3343 IPR011006 CheY-like superfamily Y89_3343 IPR016032 Signal transduction response regulator, C-terminal effector Y89_3346 IPR000792 Transcription regulator LuxR, C-terminal Y89_3346 IPR001789 Signal transduction response regulator, receiver domain Y89_3346 IPR011006 CheY-like superfamily Y89_3346 IPR016032 Signal transduction response regulator, C-terminal effector Y89_3347 IPR000620 Drug/metabolite transporter Y89_3348 IPR000014 PAS domain Y89_3348 IPR001789 Signal transduction response regulator, receiver domain Y89_3348 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_3348 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_3348 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_3348 IPR011006 CheY-like superfamily Y89_3348 IPR013656 PAS fold-4 Y89_3348 IPR035965 Y89_3348 Y89_3348 IPR036097 Y89_3348 Y89_3348 IPR036890 Y89_3348 Y89_3349 IPR013702 FIST domain, N-terminal Y89_3349 IPR019494 FIST C domain Y89_3350 IPR023614 Porin domain Y89_3351 IPR001431 Peptidase M16, zinc-binding site Y89_3351 IPR007863 Peptidase M16, C-terminal domain Y89_3351 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Y89_3351 IPR011765 Peptidase M16, N-terminal Y89_3351 IPR011844 Coenzyme PQQ biosynthesis protein PqqF Y89_3352 IPR000917 Sulfatase Y89_3352 IPR012549 Domain of unknown function DUF1705 Y89_3352 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_3352 IPR017850 Alkaline-phosphatase-like, core domain Y89_3353 IPR004685 Branched-chain amino acid transport system II carrier protein Y89_3355 IPR021719 Proteinase inhibitor I78 Y89_3358 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase Y89_3358 IPR014347 Tautomerase/MIF superfamily Y89_3360 IPR003439 ABC transporter-like Y89_3360 IPR003593 AAA+ ATPase domain Y89_3360 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3360 IPR032781 Y89_3360 Y89_3362 IPR003680 Flavodoxin-like fold Y89_3362 IPR023048 NADH-azoreductase, FMN-dependent Y89_3362 IPR029039 Flavoprotein-like Y89_3363 IPR000847 Transcription regulator HTH, LysR Y89_3363 IPR005119 LysR, substrate-binding Y89_3363 IPR036388 Y89_3363 Y89_3363 IPR036390 Y89_3363 Y89_3364 IPR002059 Cold-shock protein, DNA-binding Y89_3364 IPR010718 Protein of unknown function DUF1294 Y89_3364 IPR012340 Nucleic acid-binding, OB-fold Y89_3364 IPR019844 Cold-shock conserved site Y89_3365 IPR003824 Undecaprenyl-diphosphatase UppP Y89_3366 IPR006419 Nicotinamide mononucleotide transporter PnuC Y89_3367 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3367 IPR038727 Y89_3367 Y89_3371 IPR005074 Peptidase C39, bacteriocin processing Y89_3373 IPR025737 MetA-pathway of phenol degradation, putative Y89_3374 IPR002139 Ribokinase Y89_3374 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Y89_3374 IPR011611 Carbohydrate kinase PfkB Y89_3374 IPR011877 Ribokinase, bacterial Y89_3374 IPR029056 Ribokinase-like Y89_3375 IPR000843 Transcription regulator HTH, LacI Y89_3375 IPR010982 Lambda repressor-like, DNA-binding domain Y89_3375 IPR028082 Periplasmic binding protein-like I Y89_3376 IPR001851 ABC transporter, permease Y89_3377 IPR003439 ABC transporter-like Y89_3377 IPR003593 AAA+ ATPase domain Y89_3377 IPR017871 ABC transporter, conserved site Y89_3377 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3378 IPR025997 Periplasmic binding protein domain Y89_3378 IPR028082 Periplasmic binding protein-like I Y89_3379 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_3379 IPR002197 DNA binding HTH domain, Fis-type Y89_3379 IPR003593 AAA+ ATPase domain Y89_3379 IPR009057 Homeodomain-like Y89_3379 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_3379 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_3379 IPR025944 Sigma-54 interaction domain, conserved site Y89_3379 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3380 IPR013651 ATP-grasp fold, RimK-type Y89_3380 IPR013815 ATP-grasp fold, subdomain 1 Y89_3380 IPR025839 RimK-like ATPgrasp N-terminal domain Y89_3381 IPR000182 GNAT domain Y89_3381 IPR016181 Acyl-CoA N-acyltransferase Y89_3381 IPR021770 Protein of unknown function DUF3335 Y89_3383 IPR036909 Y89_3383 Y89_3384 IPR011614 Catalase core domain Y89_3384 IPR020835 Catalase-like domain Y89_3385 IPR002514 Transposase IS3/IS911family Y89_3385 IPR009057 Homeodomain-like Y89_3386 IPR001584 Integrase, catalytic core Y89_3386 IPR012337 Ribonuclease H-like domain Y89_3386 IPR025948 HTH-like domain Y89_3386 IPR036397 Y89_3386 Y89_3387 IPR025581 Protein of unknown function DUF4354 Y89_3388 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Y89_3388 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding Y89_3388 IPR036856 Y89_3388 Y89_3388 IPR037165 Y89_3388 Y89_3389 IPR002346 Molybdopterin dehydrogenase, FAD-binding Y89_3389 IPR005107 CO dehydrogenase flavoprotein, C-terminal Y89_3389 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_3389 IPR036318 Y89_3389 Y89_3389 IPR036683 Y89_3389 Y89_3390 IPR001041 2Fe-2S ferredoxin-type domain Y89_3390 IPR002888 [2Fe-2S]-binding Y89_3390 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Y89_3390 IPR012675 Beta-grasp domain Y89_3390 IPR036010 Y89_3390 Y89_3390 IPR036884 Y89_3390 Y89_3391 IPR000014 PAS domain Y89_3391 IPR001610 PAC motif Y89_3391 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_3391 IPR004090 Chemotaxis methyl-accepting receptor Y89_3391 IPR035965 Y89_3391 Y89_3393 IPR000182 GNAT domain Y89_3393 IPR016181 Acyl-CoA N-acyltransferase Y89_3394 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal Y89_3394 IPR006276 Cobalamin-independent methionine synthase Y89_3394 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal Y89_3394 IPR038071 Y89_3394 Y89_3395 IPR003718 OsmC/Ohr family Y89_3395 IPR003776 YcaO-like domain Y89_3395 IPR015946 K homology domain-like, alpha/beta Y89_3395 IPR019938 YcaO domain protein Y89_3395 IPR036102 Y89_3395 Y89_3396 IPR018676 Protein of unknown function DUF2149 Y89_3398 IPR003672 CobN/magnesium chelatase Y89_3399 IPR000531 TonB-dependent receptor, beta-barrel Y89_3399 IPR012910 TonB-dependent receptor, plug Y89_3399 IPR036942 Y89_3399 Y89_3399 IPR037066 Y89_3399 Y89_3400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3401 IPR005144 ATP-cone Y89_3401 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic Y89_3402 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic Y89_3403 IPR007197 Radical SAM Y89_3403 IPR012840 Ribonucleoside-triphosphate reductase, anaerobic-like Y89_3403 IPR013785 Aldolase-type TIM barrel Y89_3404 IPR006076 FAD dependent oxidoreductase Y89_3404 IPR036188 Y89_3404 Y89_3405 IPR008579 Domain of unknown function DUF861, cupin-3 Y89_3405 IPR011051 RmlC-like cupin domain Y89_3405 IPR014710 RmlC-like jelly roll fold Y89_3406 IPR013059 Tryptophan/tyrosine transporter Y89_3406 IPR018227 Tryptophan/tyrosine permease Y89_3407 IPR012914 Purine catabolism PurC-like domain Y89_3407 IPR025736 PucR C-terminal helix-turn-helix domain Y89_3409 IPR019719 Protein of unknown function DUF2599 Y89_3411 IPR007627 RNA polymerase sigma-70 region 2 Y89_3411 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_3411 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_3411 IPR013325 RNA polymerase sigma factor, region 2 Y89_3411 IPR014284 RNA polymerase sigma-70 like domain Y89_3411 IPR036388 Y89_3411 Y89_3412 IPR006860 FecR protein Y89_3412 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_3412 IPR032623 Y89_3412 Y89_3413 IPR000531 TonB-dependent receptor, beta-barrel Y89_3413 IPR010105 TonB-dependent siderophore receptor Y89_3413 IPR010917 TonB-dependent receptor, conserved site Y89_3413 IPR011662 Secretin/TonB, short N-terminal Y89_3413 IPR012910 TonB-dependent receptor, plug Y89_3413 IPR036942 Y89_3413 Y89_3413 IPR037066 Y89_3413 Y89_3414 IPR005625 PepSY-associated TM helix Y89_3416 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG Y89_3416 IPR011701 Major facilitator superfamily Y89_3416 IPR036259 Y89_3416 Y89_3417 IPR005065 Platelet-activating factor acetylhydrolase Y89_3417 IPR029058 Alpha/Beta hydrolase fold Y89_3418 IPR036265 Y89_3418 Y89_3419 IPR000659 Pyridoxamine 5'-phosphate oxidase Y89_3419 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain Y89_3419 IPR012349 FMN-binding split barrel Y89_3419 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal Y89_3419 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site Y89_3420 IPR003719 Phenazine biosynthesis PhzF protein Y89_3421 IPR005801 ADC synthase Y89_3421 IPR015890 Chorismate binding, C-terminal Y89_3421 IPR017926 Glutamine amidotransferase Y89_3421 IPR029062 Class I glutamine amidotransferase-like Y89_3422 IPR000868 Isochorismatase-like Y89_3422 IPR016291 Isochorismatase Y89_3422 IPR036380 Y89_3422 Y89_3423 IPR002480 DAHP synthetase, class II Y89_3423 IPR013785 Aldolase-type TIM barrel Y89_3424 IPR004964 Phenazine biosynthesis protein A/B Y89_3424 IPR032710 Y89_3424 Y89_3425 IPR004964 Phenazine biosynthesis protein A/B Y89_3425 IPR032710 Y89_3425 Y89_3426 IPR000792 Transcription regulator LuxR, C-terminal Y89_3426 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Y89_3426 IPR016032 Signal transduction response regulator, C-terminal effector Y89_3426 IPR036388 Y89_3426 Y89_3426 IPR036693 Y89_3426 Y89_3427 IPR006694 Fatty acid hydroxylase Y89_3429 IPR005804 Fatty acid desaturase, type 1 Y89_3430 IPR005123 Oxoglutarate/iron-dependent dioxygenase Y89_3431 IPR002692 Penicillin amidase-like Y89_3431 IPR014395 Penicillin/cephalosporin acylase Y89_3431 IPR023343 Penicillin amidase type, domain1 Y89_3431 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_3434 IPR004045 Glutathione S-transferase, N-terminal Y89_3434 IPR004046 Glutathione S-transferase, C-terminal Y89_3434 IPR036249 Y89_3434 Y89_3434 IPR036282 Y89_3434 Y89_3437 IPR029058 Alpha/Beta hydrolase fold Y89_3439 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain Y89_3439 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain Y89_3439 IPR006172 DNA-directed DNA polymerase, family B Y89_3439 IPR012337 Ribonuclease H-like domain Y89_3439 IPR017964 DNA-directed DNA polymerase, family B, conserved site Y89_3439 IPR023211 DNA polymerase, palm domain Y89_3439 IPR036397 Y89_3439 Y89_3440 IPR000182 GNAT domain Y89_3440 IPR016181 Acyl-CoA N-acyltransferase Y89_3441 IPR001387 Cro/C1-type helix-turn-helix domain Y89_3441 IPR010982 Lambda repressor-like, DNA-binding domain Y89_3441 IPR011051 RmlC-like cupin domain Y89_3441 IPR014710 RmlC-like jelly roll fold Y89_3442 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 Y89_3442 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid Y89_3442 IPR038430 Y89_3442 Y89_3443 IPR000390 Small multidrug resistance protein family Y89_3444 IPR001041 2Fe-2S ferredoxin-type domain Y89_3444 IPR002888 [2Fe-2S]-binding Y89_3444 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Y89_3444 IPR012675 Beta-grasp domain Y89_3444 IPR036010 Y89_3444 Y89_3444 IPR036884 Y89_3444 Y89_3445 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Y89_3445 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding Y89_3445 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related Y89_3445 IPR037165 Y89_3445 Y89_3446 IPR001387 Cro/C1-type helix-turn-helix domain Y89_3446 IPR010982 Lambda repressor-like, DNA-binding domain Y89_3446 IPR035965 Y89_3446 Y89_3447 IPR006674 HD domain Y89_3448 IPR003997 RTX secretion protein D, Gram-negative bacteria Y89_3448 IPR039562 Y89_3448 Y89_3449 IPR003439 ABC transporter-like Y89_3449 IPR003593 AAA+ ATPase domain Y89_3449 IPR011527 ABC transporter type 1, transmembrane domain Y89_3449 IPR017750 ATPase, type I secretion system Y89_3449 IPR017871 ABC transporter, conserved site Y89_3449 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3449 IPR036640 Y89_3449 Y89_3450 IPR003423 Outer membrane efflux protein Y89_3451 IPR011049 Serralysin-like metalloprotease, C-terminal Y89_3451 IPR013783 Immunoglobulin-like fold Y89_3452 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Y89_3453 IPR024787 EcsC protein Y89_3454 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase Y89_3454 IPR011055 Duplicated hybrid motif Y89_3454 IPR016047 Peptidase M23 Y89_3456 IPR003231 Acyl carrier protein (ACP) Y89_3456 IPR006162 Phosphopantetheine attachment site Y89_3456 IPR009081 Acyl carrier protein-like Y89_3456 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Y89_3456 IPR036736 Y89_3456 Y89_3457 IPR001775 GspD/PilQ family Y89_3457 IPR004846 Type II/III secretion system Y89_3457 IPR005644 NolW-like Y89_3457 IPR013356 Type II secretion system GspD Y89_3457 IPR036680 Y89_3457 Y89_3457 IPR038591 Y89_3457 Y89_3458 IPR024961 Y89_3458 Y89_3460 IPR006555 ATP-dependent helicase, C-terminal Y89_3460 IPR010614 DEAD2 Y89_3460 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3461 IPR011856 tRNA endonuclease-like domain Y89_3461 IPR014883 VRR-NUC domain Y89_3462 IPR001647 DNA-binding HTH domain, TetR-type Y89_3462 IPR009057 Homeodomain-like Y89_3462 IPR013573 Transcription regulator YcdC, C-terminal Y89_3462 IPR036271 Y89_3462 Y89_3463 IPR005950 Molybdenum ABC transporter, periplasmic binding protein Y89_3464 IPR000515 MetI-like domain Y89_3464 IPR011867 Molybdate ABC transporter, permease protein Y89_3464 IPR035906 Y89_3464 Y89_3465 IPR003439 ABC transporter-like Y89_3465 IPR003593 AAA+ ATPase domain Y89_3465 IPR005116 Transport-associated OB, type 1 Y89_3465 IPR008995 Molybdate/tungstate binding, C-terminal Y89_3465 IPR011868 Molybdate ABC transporter, ATP-binding protein Y89_3465 IPR017871 ABC transporter, conserved site Y89_3465 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3466 IPR007213 Leucine carboxyl methyltransferase Y89_3466 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP Y89_3466 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3467 IPR000847 Transcription regulator HTH, LysR Y89_3467 IPR005119 LysR, substrate-binding Y89_3467 IPR036388 Y89_3467 Y89_3467 IPR036390 Y89_3467 Y89_3468 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase Y89_3468 IPR011009 Protein kinase-like domain Y89_3470 IPR008526 Inner membrane protein YedI Y89_3471 IPR000883 Cytochrome c oxidase subunit I Y89_3471 IPR004677 Cytochrome c oxidase cbb3-type, subunit I Y89_3471 IPR036927 Y89_3471 Y89_3473 IPR000644 CBS domain Y89_3473 IPR007065 HPP Y89_3474 IPR000847 Transcription regulator HTH, LysR Y89_3474 IPR005119 LysR, substrate-binding Y89_3474 IPR036388 Y89_3474 Y89_3474 IPR036390 Y89_3474 Y89_3476 IPR000160 GGDEF domain Y89_3476 IPR029787 Nucleotide cyclase Y89_3477 IPR002818 ThiJ/PfpI Y89_3477 IPR009057 Homeodomain-like Y89_3477 IPR018060 DNA binding HTH domain, AraC-type Y89_3477 IPR029062 Class I glutamine amidotransferase-like Y89_3478 IPR010696 Protein of unknown function DUF1272 Y89_3479 IPR011701 Major facilitator superfamily Y89_3479 IPR036259 Y89_3479 Y89_3480 IPR000361 FeS cluster biogenesis Y89_3480 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal Y89_3480 IPR017726 Fe/S biogenesis protein NfuA Y89_3480 IPR034904 Y89_3480 Y89_3480 IPR035903 Y89_3480 Y89_3481 IPR010706 Fatty acid cis-trans isomerase Y89_3483 IPR038765 Y89_3483 Y89_3484 IPR000489 Pterin-binding Y89_3484 IPR003726 Homocysteine S-methyltransferase Y89_3484 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Y89_3484 IPR004223 Vitamin B12-dependent methionine synthase, activation domain Y89_3484 IPR006158 Cobalamin (vitamin B12)-binding domain Y89_3484 IPR011005 Dihydropteroate synthase-like Y89_3484 IPR011822 Cobalamin-dependent methionine synthase Y89_3484 IPR036589 Y89_3484 Y89_3484 IPR036594 Y89_3484 Y89_3484 IPR036724 Y89_3484 Y89_3484 IPR037010 Y89_3484 Y89_3485 IPR007416 Protein of unknown function DUF469 Y89_3486 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Y89_3486 IPR036754 Y89_3486 Y89_3487 IPR015073 Atu1913-like Y89_3487 IPR036488 Y89_3487 Y89_3488 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr Y89_3488 IPR007197 Radical SAM Y89_3488 IPR013785 Aldolase-type TIM barrel Y89_3489 IPR021344 Protein of unknown function DUF2970 Y89_3491 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Y89_3491 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Y89_3491 IPR036136 Y89_3491 Y89_3492 IPR008318 Uncharacterised conserved protein UCP030820 Y89_3493 IPR001647 DNA-binding HTH domain, TetR-type Y89_3493 IPR009057 Homeodomain-like Y89_3493 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y89_3493 IPR036271 Y89_3493 Y89_3494 IPR027961 Protein of unknown function DUF4442 Y89_3494 IPR029069 HotDog domain Y89_3495 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 Y89_3495 IPR022742 Putative lysophospholipase Y89_3495 IPR029058 Alpha/Beta hydrolase fold Y89_3496 IPR011032 GroES (chaperonin 10)-like Y89_3496 IPR013149 Alcohol dehydrogenase, C-terminal Y89_3496 IPR013154 Alcohol dehydrogenase GroES-like Y89_3496 IPR014188 Acrylyl-CoA reductase AcuI Y89_3496 IPR020843 Polyketide synthase, enoylreductase Y89_3496 IPR036291 Y89_3496 Y89_3497 IPR002142 Peptidase S49 Y89_3497 IPR013703 Peptidase S49, N-terminal proteobacteria Y89_3497 IPR029045 ClpP/crotonase-like domain Y89_3498 IPR013078 Histidine phosphatase superfamily, clade-1 Y89_3498 IPR029033 Histidine phosphatase superfamily Y89_3500 IPR002575 Aminoglycoside phosphotransferase Y89_3500 IPR011009 Protein kinase-like domain Y89_3501 IPR002347 Glucose/ribitol dehydrogenase Y89_3501 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_3501 IPR036291 Y89_3501 Y89_3502 IPR002347 Glucose/ribitol dehydrogenase Y89_3502 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_3502 IPR036291 Y89_3502 Y89_3503 IPR000847 Transcription regulator HTH, LysR Y89_3503 IPR005119 LysR, substrate-binding Y89_3503 IPR036388 Y89_3503 Y89_3503 IPR036390 Y89_3503 Y89_3505 IPR002781 Transmembrane protein TauE like Y89_3506 IPR000086 NUDIX hydrolase domain Y89_3506 IPR015375 NADH pyrophosphatase-like, N-terminal Y89_3506 IPR015376 Zinc ribbon, NADH pyrophosphatase Y89_3506 IPR015797 NUDIX hydrolase domain-like Y89_3506 IPR020084 NUDIX hydrolase, conserved site Y89_3506 IPR022925 NADH pyrophosphatase NudC Y89_3507 IPR036641 Y89_3507 Y89_3508 IPR001753 Crotonase superfamily Y89_3508 IPR014748 Crontonase, C-terminal Y89_3508 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Y89_3508 IPR029045 ClpP/crotonase-like domain Y89_3509 IPR004671 Na+/H+ antiporter NhaB Y89_3510 IPR002293 Amino acid/polyamine transporter I Y89_3511 IPR000310 Orn/Lys/Arg decarboxylase, major domain Y89_3511 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal Y89_3511 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal Y89_3511 IPR011193 Ornithine/lysine/arginine decarboxylase Y89_3511 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_3511 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_3511 IPR015424 Pyridoxal phosphate-dependent transferase Y89_3511 IPR036633 Y89_3511 Y89_3512 IPR032710 Y89_3512 Y89_3512 IPR037401 Y89_3512 Y89_3513 IPR006054 DNA polymerase III, epsilon subunit Y89_3513 IPR006309 DNA polymerase 3, epsilon subunit Y89_3513 IPR012337 Ribonuclease H-like domain Y89_3513 IPR013520 Exonuclease, RNase T/DNA polymerase III Y89_3513 IPR036397 Y89_3513 Y89_3514 IPR002156 Ribonuclease H domain Y89_3514 IPR012337 Ribonuclease H-like domain Y89_3514 IPR022892 Ribonuclease H Y89_3514 IPR036397 Y89_3514 Y89_3515 IPR013216 Methyltransferase type 11 Y89_3515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3516 IPR001279 Beta-lactamase-like Y89_3516 IPR017782 Hydroxyacylglutathione hydrolase Y89_3516 IPR032282 Y89_3516 Y89_3516 IPR036866 Y89_3516 Y89_3517 IPR000189 Prokaryotic transglycosylase, active site Y89_3517 IPR008258 Lytic transglycosylase-like SLT domain Y89_3517 IPR010511 Lytic murein transglycosylase D , lipid attachment domain Y89_3517 IPR018392 LysM domain Y89_3517 IPR023346 Lysozyme-like domain Y89_3517 IPR036779 Y89_3517 Y89_3518 IPR000914 Bacterial extracellular solute-binding protein, family 5 Y89_3518 IPR030678 Y89_3518 Y89_3519 IPR000914 Bacterial extracellular solute-binding protein, family 5 Y89_3519 IPR030678 Y89_3519 Y89_3520 IPR000515 MetI-like domain Y89_3520 IPR035906 Y89_3520 Y89_3521 IPR000515 MetI-like domain Y89_3521 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Y89_3521 IPR035906 Y89_3521 Y89_3522 IPR003439 ABC transporter-like Y89_3522 IPR003593 AAA+ ATPase domain Y89_3522 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Y89_3522 IPR017871 ABC transporter, conserved site Y89_3522 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3523 IPR002347 Glucose/ribitol dehydrogenase Y89_3523 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) Y89_3523 IPR036291 Y89_3523 Y89_3524 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Y89_3524 IPR027304 Trigger factor/SurA domain Y89_3525 IPR000119 Histone-like bacterial DNA-binding protein Y89_3525 IPR010992 Integration host factor (IHF)-like DNA-binding domain Y89_3525 IPR020816 Histone-like DNA-binding protein, conserved site Y89_3526 IPR003111 Peptidase S16, lon N-terminal Y89_3526 IPR003593 AAA+ ATPase domain Y89_3526 IPR003959 ATPase, AAA-type, core Y89_3526 IPR004815 Lon protease, bacterial/eukaryotic-type Y89_3526 IPR008269 Peptidase S16, Lon C-terminal Y89_3526 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_3526 IPR015947 PUA-like domain Y89_3526 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_3526 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3526 IPR027543 Lon protease, bacterial Y89_3527 IPR003593 AAA+ ATPase domain Y89_3527 IPR003959 ATPase, AAA-type, core Y89_3527 IPR004487 Clp protease, ATP-binding subunit ClpX Y89_3527 IPR010603 Zinc finger, ClpX C4-type Y89_3527 IPR019489 Clp ATPase, C-terminal Y89_3527 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3527 IPR038366 Y89_3527 Y89_3528 IPR001907 ATP-dependent Clp protease proteolytic subunit Y89_3528 IPR018215 ClpP, active site Y89_3528 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Y89_3528 IPR029045 ClpP/crotonase-like domain Y89_3528 IPR033135 Y89_3528 Y89_3529 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain Y89_3529 IPR005215 Trigger factor Y89_3529 IPR008880 Trigger factor, C-terminal domain Y89_3529 IPR008881 Trigger factor, ribosome-binding, bacterial Y89_3529 IPR027304 Trigger factor/SurA domain Y89_3529 IPR036611 Y89_3529 Y89_3529 IPR037041 Y89_3529 Y89_3530 IPR001789 Signal transduction response regulator, receiver domain Y89_3530 IPR001867 Signal transduction response regulator, C-terminal Y89_3530 IPR011006 CheY-like superfamily Y89_3530 IPR016032 Signal transduction response regulator, C-terminal effector Y89_3530 IPR036388 Y89_3530 Y89_3531 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_3531 IPR003660 HAMP linker domain Y89_3531 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_3531 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_3531 IPR036097 Y89_3531 Y89_3531 IPR036890 Y89_3531 Y89_3532 IPR001466 Beta-lactamase-related Y89_3532 IPR012338 Beta-lactamase/transpeptidase-like Y89_3536 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase Y89_3536 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Y89_3536 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Y89_3536 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site Y89_3536 IPR036291 Y89_3536 Y89_3537 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Y89_3537 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_3537 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR Y89_3537 IPR015803 Cysteine-tRNA ligase Y89_3537 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase Y89_3537 IPR032678 Y89_3537 Y89_3538 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Y89_3538 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Y89_3538 IPR004514 Glutamine-tRNA synthetase Y89_3538 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain Y89_3538 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_3538 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Y89_3538 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Y89_3538 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain Y89_3538 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain Y89_3538 IPR022861 Glutamine-tRNA ligase, bacterial Y89_3539 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Y89_3539 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Y89_3539 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase Y89_3539 IPR029000 Cyclophilin-like domain Y89_3540 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Y89_3540 IPR010138 UDP-2,3-diacylglucosamine hydrolase Y89_3541 IPR001107 Band 7 protein Y89_3542 IPR009078 Ferritin-like superfamily Y89_3542 IPR010386 tRNA-hydroxylase MiaE Y89_3542 IPR012347 Ferritin-related Y89_3543 IPR006016 UspA Y89_3544 IPR010710 Protein of unknown function DUF1289 Y89_3545 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Y89_3545 IPR004406 Aconitase B, bacterial Y89_3545 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Y89_3545 IPR015929 Aconitase B, N-terminal, bacterial Y89_3545 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Y89_3545 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 Y89_3545 IPR015933 Aconitase B, HEAT-like, bacterial Y89_3545 IPR018136 Aconitase family, 4Fe-4S cluster binding site Y89_3545 IPR036008 Y89_3545 Y89_3545 IPR036288 Y89_3545 Y89_3547 IPR001789 Signal transduction response regulator, receiver domain Y89_3547 IPR005561 ANTAR domain Y89_3547 IPR008327 Signal transduction response regulator, antiterminator Y89_3547 IPR011006 CheY-like superfamily Y89_3547 IPR036388 Y89_3547 Y89_3548 IPR013320 Concanavalin A-like lectin/glucanase, subgroup Y89_3548 IPR014895 Alginate lyase 2 Y89_3549 IPR004737 Nitrate transporter Y89_3549 IPR011701 Major facilitator superfamily Y89_3549 IPR036259 Y89_3549 Y89_3550 IPR000719 Protein kinase domain Y89_3550 IPR001932 Protein phosphatase 2C (PP2C)-like domain Y89_3550 IPR011009 Protein kinase-like domain Y89_3550 IPR036457 Y89_3550 Y89_3551 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Y89_3551 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site Y89_3551 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Y89_3551 IPR007419 BFD-like [2Fe-2S]-binding domain Y89_3551 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB Y89_3551 IPR016156 FAD/NAD-linked reductase, dimerisation domain Y89_3551 IPR017121 Nitrite reductase [NAD(P)H], large subunit Y89_3551 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_3551 IPR036136 Y89_3551 Y89_3551 IPR036188 Y89_3551 Y89_3552 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD Y89_3552 IPR036922 Y89_3552 Y89_3553 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site Y89_3553 IPR006656 Molybdopterin oxidoreductase Y89_3553 IPR006657 Molydopterin dinucleotide-binding domain Y89_3553 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Y89_3553 IPR007419 BFD-like [2Fe-2S]-binding domain Y89_3553 IPR009010 Aspartate decarboxylase-like domain Y89_3553 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site Y89_3554 IPR000878 Tetrapyrrole methylase Y89_3554 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Y89_3554 IPR006366 Uroporphyrin-III C-methyltransferase Y89_3554 IPR014776 Tetrapyrrole methylase, subdomain 2 Y89_3554 IPR014777 Tetrapyrrole methylase, subdomain 1 Y89_3554 IPR035996 Y89_3554 Y89_3555 IPR006664 Outer membrane protein, bacterial Y89_3555 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_3555 IPR006690 Outer membrane protein, OmpA-like, conserved site Y89_3555 IPR008722 Outer membrane porin F Y89_3555 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel Y89_3555 IPR028974 TSP type-3 repeat Y89_3555 IPR036737 Y89_3555 Y89_3556 IPR007627 RNA polymerase sigma-70 region 2 Y89_3556 IPR007630 RNA polymerase sigma-70 region 4 Y89_3556 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_3556 IPR013325 RNA polymerase sigma factor, region 2 Y89_3556 IPR014284 RNA polymerase sigma-70 like domain Y89_3556 IPR036388 Y89_3556 Y89_3557 IPR006685 Mechanosensitive ion channel MscS Y89_3557 IPR008910 Conserved TM helix Y89_3557 IPR010920 Like-Sm (LSM) domain Y89_3557 IPR023408 Y89_3557 Y89_3559 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Y89_3560 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase Y89_3560 IPR010203 Regulator of ribonuclease activity A Y89_3560 IPR036704 Y89_3560 Y89_3561 IPR000073 Alpha/beta hydrolase fold-1 Y89_3561 IPR029058 Alpha/Beta hydrolase fold Y89_3562 IPR000121 PEP-utilising enzyme, C-terminal Y89_3562 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding Y89_3562 IPR006319 Phosphoenolpyruvate synthase Y89_3562 IPR008279 PEP-utilising enzyme, mobile domain Y89_3562 IPR013815 ATP-grasp fold, subdomain 1 Y89_3562 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_3562 IPR018274 PEP-utilising enzyme, active site Y89_3562 IPR023151 PEP-utilising enzyme, conserved site Y89_3562 IPR036637 Y89_3562 Y89_3563 IPR005177 Bifunctional kinase-pyrophosphorylase Y89_3563 IPR026530 Phosphoenolpyruvate synthase regulatory protein Y89_3564 IPR021109 Aspartic peptidase domain Y89_3565 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices Y89_3565 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase Y89_3566 IPR011758 Alpha-L-glutamate ligase-related protein Y89_3566 IPR013815 ATP-grasp fold, subdomain 1 Y89_3566 IPR039523 Y89_3566 Y89_3567 IPR010794 Maltose operon periplasmic Y89_3567 IPR025392 Domain of unknown function DUF4124 Y89_3568 IPR005017 Membrane protein, aromatic hydrocarbon degradation Y89_3570 IPR005074 Peptidase C39, bacteriocin processing Y89_3572 IPR000792 Transcription regulator LuxR, C-terminal Y89_3572 IPR011990 Tetratricopeptide-like helical domain Y89_3572 IPR016032 Signal transduction response regulator, C-terminal effector Y89_3572 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3572 IPR036388 Y89_3572 Y89_3573 IPR000792 Transcription regulator LuxR, C-terminal Y89_3573 IPR011990 Tetratricopeptide-like helical domain Y89_3573 IPR016032 Signal transduction response regulator, C-terminal effector Y89_3573 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3573 IPR036388 Y89_3573 Y89_3574 IPR005801 ADC synthase Y89_3574 IPR005802 Para-aminobenzoate synthase, component I Y89_3574 IPR006805 Anthranilate synthase component I, N-terminal Y89_3574 IPR015890 Chorismate binding, C-terminal Y89_3574 IPR019999 Anthranilate synthase component I - like Y89_3575 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein Y89_3575 IPR023214 HAD-like domain Y89_3575 IPR036412 Y89_3575 Y89_3578 IPR000847 Transcription regulator HTH, LysR Y89_3578 IPR005119 LysR, substrate-binding Y89_3578 IPR036388 Y89_3578 Y89_3578 IPR036390 Y89_3578 Y89_3579 IPR006015 Universal stress protein A Y89_3579 IPR006016 UspA Y89_3579 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_3580 IPR003710 Ketopantoate reductase ApbA/PanE Y89_3580 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_3580 IPR013328 Dehydrogenase, multihelical Y89_3580 IPR013332 Ketopantoate reductase, N-terminal domain Y89_3580 IPR013752 Ketopantoate reductase, C-terminal domain Y89_3580 IPR036291 Y89_3580 Y89_3581 IPR036249 Y89_3581 Y89_3582 IPR006218 DAHP synthetase I/KDSA Y89_3582 IPR006219 DHAP synthase, class 1 Y89_3582 IPR013785 Aldolase-type TIM barrel Y89_3583 IPR016181 Acyl-CoA N-acyltransferase Y89_3583 IPR031165 Y89_3583 Y89_3584 IPR001753 Crotonase superfamily Y89_3584 IPR029045 ClpP/crotonase-like domain Y89_3586 IPR002589 Macro domain Y89_3587 IPR011990 Tetratricopeptide-like helical domain Y89_3590 IPR017926 Glutamine amidotransferase Y89_3590 IPR029062 Class I glutamine amidotransferase-like Y89_3591 IPR004045 Glutathione S-transferase, N-terminal Y89_3591 IPR036249 Y89_3591 Y89_3592 IPR011042 Six-bladed beta-propeller, TolB-like Y89_3593 IPR020471 Aldo/keto reductase subgroup Y89_3593 IPR023210 NADP-dependent oxidoreductase domain Y89_3593 IPR036812 Y89_3593 Y89_3594 IPR000847 Transcription regulator HTH, LysR Y89_3594 IPR005119 LysR, substrate-binding Y89_3594 IPR036388 Y89_3594 Y89_3594 IPR036390 Y89_3594 Y89_3595 IPR001753 Crotonase superfamily Y89_3595 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Y89_3595 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Y89_3595 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_3595 IPR029045 ClpP/crotonase-like domain Y89_3595 IPR036291 Y89_3595 Y89_3596 IPR002155 Thiolase Y89_3596 IPR016039 Thiolase-like Y89_3596 IPR020610 Thiolase, active site Y89_3596 IPR020613 Thiolase, conserved site Y89_3596 IPR020615 Thiolase, acyl-enzyme intermediate active site Y89_3596 IPR020616 Thiolase, N-terminal Y89_3596 IPR020617 Thiolase, C-terminal Y89_3598 IPR004776 Auxin efflux carrier Y89_3599 IPR009056 Cytochrome c-like domain Y89_3599 IPR036909 Y89_3599 Y89_3600 IPR001353 Proteasome, subunit alpha/beta Y89_3600 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 Y89_3600 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_3601 IPR002931 Transglutaminase-like Y89_3601 IPR013589 Bacterial transglutaminase-like, N-terminal Y89_3601 IPR038765 Y89_3601 Y89_3602 IPR007296 Domain of unknown function DUF403 Y89_3603 IPR016450 Uncharacterised conserved protein UCP005522 Y89_3603 IPR025841 Circularly permuted ATP-grasp type 2 Y89_3604 IPR017926 Glutamine amidotransferase Y89_3604 IPR029062 Class I glutamine amidotransferase-like Y89_3605 IPR009671 Regulator of ribonuclease activity B domain Y89_3605 IPR036701 Y89_3605 Y89_3606 IPR000160 GGDEF domain Y89_3606 IPR001633 EAL domain Y89_3606 IPR005330 MHYT Y89_3606 IPR029787 Nucleotide cyclase Y89_3606 IPR035919 Y89_3606 Y89_3607 IPR001764 Glycoside hydrolase, family 3, N-terminal Y89_3607 IPR002772 Glycoside hydrolase family 3 C-terminal domain Y89_3607 IPR013783 Immunoglobulin-like fold Y89_3607 IPR017853 Glycoside hydrolase, superfamily Y89_3607 IPR019800 Glycoside hydrolase, family 3, active site Y89_3607 IPR026891 Fibronectin type III-like domain Y89_3607 IPR036881 Y89_3607 Y89_3607 IPR036962 Y89_3607 Y89_3608 IPR012842 Type III secretion system HrpE/YscL Y89_3608 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Y89_3609 IPR009510 Type III secretion system, secretion protein K Y89_3610 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ Y89_3610 IPR006182 Secretory protein YscJ/FliF Y89_3611 IPR012670 Type III secretion system, YscI/HrpB Y89_3612 IPR013349 Type III secretion system effector YopR Y89_3613 IPR011990 Tetratricopeptide-like helical domain Y89_3613 IPR013348 Type III secretion system YscG Y89_3614 IPR011841 Type III secretion system, needle protein Y89_3614 IPR021123 Type III secretion, needle-protein-like Y89_3614 IPR037203 Y89_3614 Y89_3615 IPR012671 Type III secretion system, secretion protein E Y89_3616 IPR012843 Type III secretion system YscD/HrpQ Y89_3616 IPR032030 Y89_3616 Y89_3616 IPR032034 Y89_3616 Y89_3617 IPR003522 Type III secretion system outer membrane pore YscC/HrcC Y89_3617 IPR004845 Type II secretion system GspD, conserved site Y89_3617 IPR004846 Type II/III secretion system Y89_3617 IPR005644 NolW-like Y89_3617 IPR038591 Y89_3617 Y89_3618 IPR010261 Tir chaperone protein (CesT) family Y89_3618 IPR013353 Type III secretion system chaperone YscB Y89_3619 IPR031835 Y89_3619 Y89_3620 IPR009057 Homeodomain-like Y89_3620 IPR014710 RmlC-like jelly roll fold Y89_3620 IPR018060 DNA binding HTH domain, AraC-type Y89_3620 IPR018062 HTH domain AraC-type, conserved site Y89_3620 IPR020449 Transcription regulator HTH, AraC- type Y89_3621 IPR013400 Type III secretion system chaperone, YscW Y89_3621 IPR039366 Y89_3621 Y89_3623 IPR010261 Tir chaperone protein (CesT) family Y89_3624 IPR008898 YopD-like Y89_3625 IPR006972 Secretion system effector C, SseC-like Y89_3626 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD Y89_3626 IPR011990 Tetratricopeptide-like helical domain Y89_3626 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup Y89_3627 IPR005413 Low calcium response V antigen Y89_3627 IPR036139 Y89_3627 Y89_3628 IPR009863 Type III secretion protein, LcrG Y89_3629 IPR013405 Type III secretion system regulator, LcrR Y89_3629 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 Y89_3630 IPR001712 Type III secretion system FHIPEP Y89_3630 IPR006302 Type III secretion protein HrcV Y89_3630 IPR025505 FHIPEP conserved site Y89_3631 IPR011990 Tetratricopeptide-like helical domain Y89_3631 IPR016684 Type III secretion system chaperone, YscY Y89_3632 IPR012672 Type III secretion system YscX Y89_3633 IPR012673 Type III secretion system chaperone SycN Y89_3634 IPR013351 Type III secretion system effector delivery regulator TyeA-related Y89_3634 IPR015144 Type III secretion system effector delivery regulator TyeA Y89_3634 IPR038347 Y89_3634 Y89_3635 IPR010812 Hypersensitivity response secretion-like, HrpJ Y89_3635 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC Y89_3636 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Y89_3636 IPR003593 AAA+ ATPase domain Y89_3636 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain Y89_3636 IPR005714 ATPase, type III secretion system, FliI/YscN Y89_3636 IPR013380 ATPase, type III secretion system, H+-transporting Y89_3636 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Y89_3636 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3637 IPR009929 Type III secretion sytem,YscO Y89_3638 IPR013354 Type III secretion system needle length determinant, C-terminal domain Y89_3638 IPR021136 Flagellar hook-length control protein-like, C-terminal Y89_3639 IPR001543 Surface presentation of antigen (SpoA) Y89_3639 IPR003283 Type III secretion system outer membrane, SpaO Y89_3639 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO Y89_3639 IPR036429 Y89_3639 Y89_3640 IPR005773 Yop virulence translocation protein R Y89_3640 IPR005838 Type III secretion system inner membrane P protein Y89_3641 IPR002191 Bacterial export protein family 3 Y89_3641 IPR006306 Type III secretion protein HrpO Y89_3642 IPR002010 Type III secretion system inner membrane R protein Y89_3642 IPR006304 Type III secretion protein SpaR/YscT Y89_3643 IPR006135 Type III secretion system substrate exporter Y89_3643 IPR006307 Type III exporter system, secretion apparatus protein BsaZ Y89_3643 IPR029025 Type III secretion system substrate exporter, C-terminal Y89_3644 IPR000917 Sulfatase Y89_3644 IPR012160 Membrane sulfatase, HI1246-related Y89_3644 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_3644 IPR017850 Alkaline-phosphatase-like, core domain Y89_3646 IPR001045 Spermidine/spermine synthases family Y89_3646 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3646 IPR030373 Y89_3646 Y89_3646 IPR035246 Y89_3646 Y89_3646 IPR037163 Y89_3646 Y89_3647 IPR003265 HhH-GPD domain Y89_3647 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Y89_3647 IPR011257 DNA glycosylase Y89_3647 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Y89_3647 IPR037046 Y89_3647 Y89_3648 IPR027379 Cardiolipin synthase N-terminal Y89_3649 IPR006439 HAD hydrolase, subfamily IA Y89_3649 IPR023214 HAD-like domain Y89_3649 IPR023943 Enolase-phosphatase E1 Y89_3649 IPR036412 Y89_3649 Y89_3650 IPR004313 Acireductone dioxygenase ARD family Y89_3650 IPR011051 RmlC-like cupin domain Y89_3650 IPR014710 RmlC-like jelly roll fold Y89_3650 IPR023956 Acireductone dioxygenase ARD Y89_3651 IPR001303 Class II aldolase/adducin N-terminal Y89_3651 IPR017714 Methylthioribulose-1-phosphate dehydratase Y89_3651 IPR036409 Y89_3651 Y89_3652 IPR024989 Major facilitator superfamily associated domain Y89_3652 IPR026032 Phenylproprionate/maltose permease Y89_3652 IPR036259 Y89_3652 Y89_3653 IPR000453 Chorismate synthase Y89_3653 IPR020541 Chorismate synthase, conserved site Y89_3653 IPR035904 Y89_3653 Y89_3654 IPR022742 Putative lysophospholipase Y89_3654 IPR029058 Alpha/Beta hydrolase fold Y89_3656 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Y89_3656 IPR004556 Modification methylase HemK Y89_3656 IPR007848 Methyltransferase small domain Y89_3656 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase Y89_3656 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3657 IPR000868 Isochorismatase-like Y89_3657 IPR036380 Y89_3657 Y89_3659 IPR002625 Smr protein/MutS2 C-terminal Y89_3659 IPR036063 Y89_3659 Y89_3660 IPR001474 GTP cyclohydrolase I Y89_3660 IPR018234 GTP cyclohydrolase I, conserved site Y89_3660 IPR020602 GTP cyclohydrolase I domain Y89_3661 IPR012312 Haemerythrin/HHE cation-binding motif Y89_3661 IPR012827 Haemerythrin-like, metal-binding domain Y89_3661 IPR016131 Haemerythrin, iron-binding site Y89_3661 IPR023504 Bacteriohemerythrin-like protein Y89_3661 IPR035938 Y89_3661 Y89_3662 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_3662 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_3663 IPR000719 Protein kinase domain Y89_3663 IPR008271 Serine/threonine-protein kinase, active site Y89_3663 IPR011009 Protein kinase-like domain Y89_3663 IPR017441 Protein kinase, ATP binding site Y89_3664 IPR001932 Protein phosphatase 2C (PP2C)-like domain Y89_3664 IPR036457 Y89_3664 Y89_3665 IPR009612 ImcF-related Y89_3665 IPR010623 Domain of unknown function DUF1215 Y89_3665 IPR017731 Type VI secretion system, IcmF Y89_3665 IPR025743 ImcF-related, N-terminal domain Y89_3665 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3666 IPR017732 Type IV / VI secretion system, DotU Y89_3666 IPR038522 Y89_3666 Y89_3667 IPR010263 Protein of unknown function DUF876 Y89_3668 IPR017734 Type VI secretion system, lipoprotein SciN Y89_3668 IPR038706 Y89_3668 Y89_3669 IPR000253 Forkhead-associated (FHA) domain Y89_3669 IPR008984 SMAD/FHA domain Y89_3669 IPR017735 Type VI secretion system, FHA domain-containing protein Y89_3671 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_3671 IPR002197 DNA binding HTH domain, Fis-type Y89_3671 IPR003593 AAA+ ATPase domain Y89_3671 IPR009057 Homeodomain-like Y89_3671 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_3671 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_3671 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3671 IPR029016 GAF domain-like Y89_3672 IPR001270 ClpA/B family Y89_3672 IPR003593 AAA+ ATPase domain Y89_3672 IPR003959 ATPase, AAA-type, core Y89_3672 IPR004176 Clp, N-terminal Y89_3672 IPR017729 Type VI secretion system, ATPase ClpV1 Y89_3672 IPR018368 ClpA/B, conserved site 1 Y89_3672 IPR019489 Clp ATPase, C-terminal Y89_3672 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3672 IPR028299 ClpA/B, conserved site 2 Y89_3672 IPR036628 Y89_3672 Y89_3673 IPR010732 Protein of unknown function DUF1305 Y89_3674 IPR010272 Type VI secretion system, VCA0110 Y89_3675 IPR007048 GpW/Gp25/anti-adapter protein IraD Y89_3675 IPR017737 Type VI secretion system, lysozyme-related protein Y89_3676 IPR010269 Protein of unknown function DUF877 Y89_3677 IPR008312 Uncharacterised conserved protein UCP028301 Y89_3678 IPR010657 ImpA, N-terminal Y89_3678 IPR017739 Type VI secretion system-associated, VCA0119 Y89_3679 IPR004045 Glutathione S-transferase, N-terminal Y89_3679 IPR004046 Glutathione S-transferase, C-terminal Y89_3679 IPR036249 Y89_3679 Y89_3679 IPR036282 Y89_3679 Y89_3680 IPR004839 Aminotransferase, class I/classII Y89_3680 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_3680 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_3680 IPR015424 Pyridoxal phosphate-dependent transferase Y89_3681 IPR000835 MarR-type HTH domain Y89_3681 IPR036388 Y89_3681 Y89_3681 IPR036390 Y89_3681 Y89_3683 IPR004711 Benzoate transporter Y89_3684 IPR002657 Bile acid:sodium symporter Y89_3684 IPR038770 Y89_3684 Y89_3685 IPR002347 Glucose/ribitol dehydrogenase Y89_3685 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_3685 IPR036291 Y89_3685 Y89_3686 IPR011032 GroES (chaperonin 10)-like Y89_3686 IPR013149 Alcohol dehydrogenase, C-terminal Y89_3686 IPR020843 Polyketide synthase, enoylreductase Y89_3686 IPR036291 Y89_3686 Y89_3687 IPR001902 Sulphate anion transporter Y89_3687 IPR002645 STAS domain Y89_3687 IPR011547 Sulphate transporter Y89_3687 IPR036513 Y89_3687 Y89_3688 IPR003660 HAMP linker domain Y89_3688 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_3688 IPR032255 Y89_3688 Y89_3689 IPR031561 Y89_3689 Y89_3690 IPR002563 Flavin reductase-like, FMN-binding Y89_3690 IPR012349 FMN-binding split barrel Y89_3691 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V Y89_3691 IPR011057 Mss4-like Y89_3692 IPR001763 Rhodanese-like domain Y89_3692 IPR017582 tRNA 2-selenouridine synthase Y89_3692 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3692 IPR036873 Y89_3692 Y89_3693 IPR004536 Selenide water dikinase Y89_3693 IPR010918 AIR synthase-related protein, C-terminal domain Y89_3693 IPR016188 PurM, N-terminal-like Y89_3693 IPR023061 Selenide, water dikinase, class I Y89_3693 IPR036676 Y89_3693 Y89_3693 IPR036921 Y89_3693 Y89_3695 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Y89_3696 IPR032609 Y89_3696 Y89_3697 IPR012338 Beta-lactamase/transpeptidase-like Y89_3697 IPR015868 Glutaminase Y89_3698 IPR001789 Signal transduction response regulator, receiver domain Y89_3698 IPR001867 Signal transduction response regulator, C-terminal Y89_3698 IPR011006 CheY-like superfamily Y89_3698 IPR036388 Y89_3698 Y89_3699 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_3699 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_3699 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal Y89_3699 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_3699 IPR006016 UspA Y89_3699 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_3699 IPR025201 Sensor protein KdpD, transmembrane domain Y89_3699 IPR029016 GAF domain-like Y89_3699 IPR036097 Y89_3699 Y89_3699 IPR036890 Y89_3699 Y89_3699 IPR038318 Y89_3699 Y89_3700 IPR003820 Potassium-transporting ATPase C chain Y89_3701 IPR001757 Cation-transporting P-type ATPase Y89_3701 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA Y89_3701 IPR008250 P-type ATPase, A domain Y89_3701 IPR018303 P-type ATPase, phosphorylation site Y89_3701 IPR023214 HAD-like domain Y89_3701 IPR023298 P-type ATPase, transmembrane domain Y89_3701 IPR023299 P-type ATPase, cytoplasmic domain N Y89_3701 IPR036412 Y89_3701 Y89_3702 IPR004623 Potassium-transporting ATPase A chain Y89_3703 IPR011726 K+ transporting P-type ATPase, F subunit Y89_3704 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_3704 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_3704 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_3704 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_3704 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_3704 IPR036250 Y89_3704 Y89_3704 IPR037069 Y89_3704 Y89_3705 IPR005471 Transcription regulator IclR, N-terminal Y89_3705 IPR014757 Transcription regulator IclR, C-terminal Y89_3705 IPR029016 GAF domain-like Y89_3705 IPR036388 Y89_3705 Y89_3705 IPR036390 Y89_3705 Y89_3706 IPR001753 Crotonase superfamily Y89_3706 IPR014748 Crontonase, C-terminal Y89_3706 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Y89_3706 IPR029045 ClpP/crotonase-like domain Y89_3707 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Y89_3707 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Y89_3707 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_3707 IPR036291 Y89_3707 Y89_3708 IPR000524 Transcription regulator HTH, GntR Y89_3708 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_3708 IPR011711 GntR, C-terminal Y89_3708 IPR036388 Y89_3708 Y89_3708 IPR036390 Y89_3708 Y89_3709 IPR004747 Cyanate transport system protein Y89_3709 IPR011701 Major facilitator superfamily Y89_3709 IPR036259 Y89_3709 Y89_3710 IPR002549 Uncharacterised protein family UPF0118 Y89_3711 IPR032608 Y89_3711 Y89_3712 IPR004045 Glutathione S-transferase, N-terminal Y89_3712 IPR004046 Glutathione S-transferase, C-terminal Y89_3712 IPR036249 Y89_3712 Y89_3712 IPR036282 Y89_3712 Y89_3713 IPR000073 Alpha/beta hydrolase fold-1 Y89_3713 IPR029058 Alpha/Beta hydrolase fold Y89_3714 IPR000073 Alpha/beta hydrolase fold-1 Y89_3714 IPR029058 Alpha/Beta hydrolase fold Y89_3715 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_3716 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_3716 IPR009057 Homeodomain-like Y89_3716 IPR014710 RmlC-like jelly roll fold Y89_3716 IPR018060 DNA binding HTH domain, AraC-type Y89_3716 IPR018062 HTH domain AraC-type, conserved site Y89_3716 IPR020449 Transcription regulator HTH, AraC- type Y89_3716 IPR037923 Y89_3716 Y89_3717 IPR003736 Phenylacetic acid degradation-related domain Y89_3717 IPR029069 HotDog domain Y89_3718 IPR000873 AMP-dependent synthetase/ligase Y89_3718 IPR020845 AMP-binding, conserved site Y89_3719 IPR004449 Phosphohistidine phosphatase SixA, subgroup Y89_3719 IPR013078 Histidine phosphatase superfamily, clade-1 Y89_3719 IPR029033 Histidine phosphatase superfamily Y89_3720 IPR025498 Protein of unknown function DUF4389 Y89_3721 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal Y89_3721 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent Y89_3721 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_3721 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal Y89_3721 IPR013328 Dehydrogenase, multihelical Y89_3721 IPR036291 Y89_3721 Y89_3722 IPR000531 TonB-dependent receptor, beta-barrel Y89_3722 IPR012910 TonB-dependent receptor, plug Y89_3722 IPR037066 Y89_3722 Y89_3724 IPR001789 Signal transduction response regulator, receiver domain Y89_3724 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_3724 IPR003660 HAMP linker domain Y89_3724 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_3724 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_3724 IPR011006 CheY-like superfamily Y89_3724 IPR019247 Histidine kinase BarA, N-terminal Y89_3724 IPR036097 Y89_3724 Y89_3724 IPR036890 Y89_3724 Y89_3725 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA Y89_3725 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Y89_3725 IPR029069 HotDog domain Y89_3726 IPR014030 Beta-ketoacyl synthase, N-terminal Y89_3726 IPR014031 Beta-ketoacyl synthase, C-terminal Y89_3726 IPR016039 Thiolase-like Y89_3726 IPR018201 Beta-ketoacyl synthase, active site Y89_3726 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Y89_3727 IPR003660 HAMP linker domain Y89_3727 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_3727 IPR004090 Chemotaxis methyl-accepting receptor Y89_3727 IPR024478 4HB MCP domain Y89_3728 IPR002577 Helix-turn-helix, HxlR type Y89_3728 IPR036388 Y89_3728 Y89_3728 IPR036390 Y89_3728 Y89_3729 IPR024331 Domain of unknown function DUF3859 Y89_3730 IPR006680 Amidohydrolase 1 Y89_3730 IPR032466 Y89_3730 Y89_3731 IPR001638 Extracellular solute-binding protein, family 3 Y89_3732 IPR000835 MarR-type HTH domain Y89_3732 IPR036388 Y89_3732 Y89_3732 IPR036390 Y89_3732 Y89_3733 IPR001041 2Fe-2S ferredoxin-type domain Y89_3733 IPR002888 [2Fe-2S]-binding Y89_3733 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Y89_3733 IPR012675 Beta-grasp domain Y89_3733 IPR036010 Y89_3733 Y89_3733 IPR036884 Y89_3733 Y89_3734 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Y89_3734 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding Y89_3734 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related Y89_3734 IPR037165 Y89_3734 Y89_3735 IPR009056 Cytochrome c-like domain Y89_3735 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit Y89_3735 IPR036909 Y89_3735 Y89_3736 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_3736 IPR009057 Homeodomain-like Y89_3736 IPR011051 RmlC-like cupin domain Y89_3736 IPR014710 RmlC-like jelly roll fold Y89_3736 IPR018060 DNA binding HTH domain, AraC-type Y89_3736 IPR018062 HTH domain AraC-type, conserved site Y89_3736 IPR020449 Transcription regulator HTH, AraC- type Y89_3737 IPR003700 Ketopantoate hydroxymethyltransferase Y89_3737 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_3738 IPR002925 Dienelactone hydrolase Y89_3738 IPR029058 Alpha/Beta hydrolase fold Y89_3739 IPR001404 Heat shock protein Hsp90 family Y89_3739 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_3739 IPR019805 Heat shock protein Hsp90, conserved site Y89_3739 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_3739 IPR020575 Heat shock protein Hsp90, N-terminal Y89_3739 IPR036890 Y89_3739 Y89_3739 IPR037196 Y89_3739 Y89_3741 IPR006683 Thioesterase superfamily Y89_3741 IPR029069 HotDog domain Y89_3742 IPR003736 Phenylacetic acid degradation-related domain Y89_3742 IPR006683 Thioesterase superfamily Y89_3742 IPR029069 HotDog domain Y89_3744 IPR006747 Protein of unknown function DUF599 Y89_3745 IPR004685 Branched-chain amino acid transport system II carrier protein Y89_3746 IPR003781 CoA-binding Y89_3746 IPR005810 Succinyl-CoA ligase, alpha subunit Y89_3746 IPR005811 ATP-citrate lyase/succinyl-CoA ligase Y89_3746 IPR016102 Succinyl-CoA synthetase-like Y89_3746 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Y89_3746 IPR033847 Y89_3746 Y89_3746 IPR036291 Y89_3746 Y89_3747 IPR005809 Succinyl-CoA synthetase, beta subunit Y89_3747 IPR005811 ATP-citrate lyase/succinyl-CoA ligase Y89_3747 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type Y89_3747 IPR013815 ATP-grasp fold, subdomain 1 Y89_3747 IPR016102 Succinyl-CoA synthetase-like Y89_3747 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site Y89_3748 IPR001100 Y89_3748 Y89_3748 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y89_3748 IPR006258 Dihydrolipoamide dehydrogenase Y89_3748 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Y89_3748 IPR016156 FAD/NAD-linked reductase, dimerisation domain Y89_3748 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_3748 IPR036188 Y89_3748 Y89_3749 IPR000089 Biotin/lipoyl attachment Y89_3749 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Y89_3749 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Y89_3749 IPR004167 E3 binding Y89_3749 IPR006255 Dihydrolipoamide succinyltransferase Y89_3749 IPR011053 Single hybrid motif Y89_3749 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_3749 IPR036625 Y89_3749 Y89_3750 IPR001017 Dehydrogenase, E1 component Y89_3750 IPR005475 Transketolase-like, pyrimidine-binding domain Y89_3750 IPR011603 2-oxoglutarate dehydrogenase E1 component Y89_3750 IPR029061 Thiamin diphosphate-binding fold Y89_3750 IPR031717 Y89_3750 Y89_3750 IPR032106 Y89_3750 Y89_3751 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein Y89_3751 IPR009051 Alpha-helical ferredoxin Y89_3751 IPR012675 Beta-grasp domain Y89_3751 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_3751 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal Y89_3751 IPR036010 Y89_3751 Y89_3752 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site Y89_3752 IPR003953 FAD binding domain Y89_3752 IPR011281 Succinate dehydrogenase, flavoprotein subunit Y89_3752 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Y89_3752 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Y89_3752 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Y89_3752 IPR036188 Y89_3752 Y89_3752 IPR037099 Y89_3752 Y89_3753 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit Y89_3753 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor Y89_3753 IPR034804 Y89_3753 Y89_3754 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit Y89_3754 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit Y89_3754 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site Y89_3754 IPR034804 Y89_3754 Y89_3755 IPR002020 Citrate synthase-like Y89_3755 IPR010953 Citrate synthase, type I Y89_3755 IPR016142 Citrate synthase-like, large alpha subdomain Y89_3755 IPR016143 Citrate synthase-like, small alpha subdomain Y89_3755 IPR019810 Citrate synthase active site Y89_3755 IPR024176 Citrate synthase, bacterial-type Y89_3755 IPR036969 Y89_3755 Y89_3756 IPR002913 START domain Y89_3756 IPR023393 START-like domain Y89_3756 IPR028347 START domain-containing protein Y89_3757 IPR005358 Putative zinc- or iron-chelating domain containing protein Y89_3759 IPR007437 Protein of unknown function DUF486 Y89_3760 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Y89_3760 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Y89_3760 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_3760 IPR013328 Dehydrogenase, multihelical Y89_3760 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type Y89_3760 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Y89_3760 IPR036291 Y89_3760 Y89_3761 IPR012337 Ribonuclease H-like domain Y89_3761 IPR013520 Exonuclease, RNase T/DNA polymerase III Y89_3761 IPR036397 Y89_3761 Y89_3762 IPR009664 Protein of unknown function DUF1255 Y89_3762 IPR011051 RmlC-like cupin domain Y89_3762 IPR014710 RmlC-like jelly roll fold Y89_3763 IPR009706 Protein of unknown function DUF1287 Y89_3764 IPR002504 Inorganic polyphosphate/ATP-NAD kinase Y89_3764 IPR011386 Putative ATP-NAD kinase Y89_3764 IPR016064 ATP-NAD kinase-like domain Y89_3766 IPR000847 Transcription regulator HTH, LysR Y89_3766 IPR005119 LysR, substrate-binding Y89_3766 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type Y89_3766 IPR036388 Y89_3766 Y89_3766 IPR036390 Y89_3766 Y89_3767 IPR000849 Sugar phosphate transporter Y89_3767 IPR011701 Major facilitator superfamily Y89_3767 IPR036259 Y89_3767 Y89_3768 IPR006175 YjgF/Yer057p/UK114 family Y89_3768 IPR035959 Y89_3768 Y89_3769 IPR006076 FAD dependent oxidoreductase Y89_3769 IPR017715 Putative aminophosphonate oxidoreductase Y89_3769 IPR036188 Y89_3769 Y89_3770 IPR008146 Glutamine synthetase, catalytic domain Y89_3770 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_3770 IPR027303 Glutamine synthetase, glycine-rich site Y89_3770 IPR036651 Y89_3770 Y89_3771 IPR006076 FAD dependent oxidoreductase Y89_3771 IPR036188 Y89_3771 Y89_3772 IPR001455 TusA-like domain Y89_3772 IPR022931 Sulphurtransferase TusA Y89_3772 IPR036868 Y89_3772 Y89_3773 IPR002877 Ribosomal RNA methyltransferase FtsJ domain Y89_3773 IPR011224 Ribosomal RNA large subunit methyltransferase M Y89_3773 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3774 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel Y89_3774 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Y89_3774 IPR006249 Aconitate/iron regulatory protein 2 Y89_3774 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Y89_3774 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Y89_3774 IPR018136 Aconitase family, 4Fe-4S cluster binding site Y89_3774 IPR036008 Y89_3774 Y89_3776 IPR000014 PAS domain Y89_3776 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_3776 IPR004090 Chemotaxis methyl-accepting receptor Y89_3776 IPR013655 PAS fold-3 Y89_3776 IPR035965 Y89_3776 Y89_3777 IPR013120 Male sterility, NAD-binding Y89_3777 IPR036291 Y89_3777 Y89_3778 IPR029058 Alpha/Beta hydrolase fold Y89_3779 IPR000883 Cytochrome c oxidase subunit I Y89_3779 IPR004677 Cytochrome c oxidase cbb3-type, subunit I Y89_3779 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Y89_3779 IPR036927 Y89_3779 Y89_3780 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Y89_3780 IPR036909 Y89_3780 Y89_3781 IPR008621 Cbb3-type cytochrome oxidase component Y89_3782 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Y89_3782 IPR009056 Cytochrome c-like domain Y89_3782 IPR032858 Y89_3782 Y89_3782 IPR036909 Y89_3782 Y89_3782 IPR038414 Y89_3782 Y89_3783 IPR000883 Cytochrome c oxidase subunit I Y89_3783 IPR004677 Cytochrome c oxidase cbb3-type, subunit I Y89_3783 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Y89_3783 IPR036927 Y89_3783 Y89_3784 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Y89_3784 IPR036909 Y89_3784 Y89_3785 IPR008621 Cbb3-type cytochrome oxidase component Y89_3786 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Y89_3786 IPR008168 Cytochrome c, class IC Y89_3786 IPR009056 Cytochrome c-like domain Y89_3786 IPR032858 Y89_3786 Y89_3786 IPR036909 Y89_3786 Y89_3786 IPR038414 Y89_3786 Y89_3787 IPR013783 Immunoglobulin-like fold Y89_3787 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG Y89_3787 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_3787 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_3787 IPR032879 Y89_3787 Y89_3788 IPR008620 FixH Y89_3789 IPR001757 Cation-transporting P-type ATPase Y89_3789 IPR006121 Heavy metal-associated domain, HMA Y89_3789 IPR008250 P-type ATPase, A domain Y89_3789 IPR018303 P-type ATPase, phosphorylation site Y89_3789 IPR021993 Putative metal-binding domain of cation transport ATPase Y89_3789 IPR023214 HAD-like domain Y89_3789 IPR023298 P-type ATPase, transmembrane domain Y89_3789 IPR023299 P-type ATPase, cytoplasmic domain N Y89_3789 IPR027256 Cation-transporting P-type ATPase, subfamily IB Y89_3789 IPR036163 Y89_3789 Y89_3789 IPR036412 Y89_3789 Y89_3790 IPR004714 Cytochrome oxidase maturation protein cbb3-type Y89_3791 IPR039447 Y89_3791 Y89_3792 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN Y89_3792 IPR006638 Elongator protein 3/MiaB/NifB Y89_3792 IPR007197 Radical SAM Y89_3792 IPR010723 HemN, C-terminal domain Y89_3792 IPR023404 Radical SAM, alpha/beta horseshoe Y89_3794 IPR000595 Cyclic nucleotide-binding domain Y89_3794 IPR012318 Helix-turn-helix motif, Crp-type Y89_3794 IPR014710 RmlC-like jelly roll fold Y89_3794 IPR018335 Transcription regulator HTH, Crp-type, conserved site Y89_3794 IPR018490 Cyclic nucleotide-binding-like Y89_3794 IPR036388 Y89_3794 Y89_3794 IPR036390 Y89_3794 Y89_3795 IPR000836 Phosphoribosyltransferase domain Y89_3795 IPR005764 Adenine phosphoribosyl transferase Y89_3795 IPR029057 Phosphoribosyltransferase-like Y89_3796 IPR016516 Uncharacterised conserved protein UCP07580 Y89_3797 IPR000390 Small multidrug resistance protein family Y89_3798 IPR000390 Small multidrug resistance protein family Y89_3799 IPR001647 DNA-binding HTH domain, TetR-type Y89_3799 IPR009057 Homeodomain-like Y89_3800 IPR020946 Flavin monooxygenase-like Y89_3800 IPR036188 Y89_3800 Y89_3801 IPR002347 Glucose/ribitol dehydrogenase Y89_3801 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_3801 IPR036291 Y89_3801 Y89_3802 IPR005363 Uncharacterised protein family UPF0167 Y89_3803 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_3803 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_3803 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_3803 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_3803 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_3803 IPR036250 Y89_3803 Y89_3803 IPR037069 Y89_3803 Y89_3804 IPR000093 DNA recombination protein RecR Y89_3804 IPR006171 Toprim domain Y89_3804 IPR015967 Recombination protein RecR, conserved site Y89_3804 IPR023627 Recombination protein RecR Y89_3804 IPR023628 Recombination protein RecR, C4-type zinc finger Y89_3805 IPR004401 Nucleoid-associated protein YbaB Y89_3805 IPR036894 Y89_3805 Y89_3806 IPR001270 ClpA/B family Y89_3806 IPR003593 AAA+ ATPase domain Y89_3806 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Y89_3806 IPR012763 DNA polymerase III, subunit gamma/ tau Y89_3806 IPR021029 DNA polymerase III, tau subunit, domain V Y89_3806 IPR022754 DNA polymerase III, gamma subunit, domain III Y89_3806 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3806 IPR038249 Y89_3806 Y89_3807 IPR001638 Extracellular solute-binding protein, family 3 Y89_3809 IPR001357 BRCT domain Y89_3809 IPR001679 NAD-dependent DNA ligase Y89_3809 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type Y89_3809 IPR004150 NAD-dependent DNA ligase, OB-fold Y89_3809 IPR010994 RuvA domain 2-like Y89_3809 IPR012340 Nucleic acid-binding, OB-fold Y89_3809 IPR013839 NAD-dependent DNA ligase, adenylation Y89_3809 IPR013840 NAD-dependent DNA ligase, N-terminal Y89_3809 IPR018239 NAD-dependent DNA ligase, active site Y89_3809 IPR033136 Y89_3809 Y89_3809 IPR036420 Y89_3809 Y89_3810 IPR007449 ZipA, C-terminal FtsZ-binding domain Y89_3810 IPR011919 Cell division protein ZipA Y89_3810 IPR036765 Y89_3810 Y89_3811 IPR003395 RecF/RecN/SMC, N-terminal Y89_3811 IPR010935 SMCs flexible hinge Y89_3811 IPR011890 Structural maintenance of chromosomes protein, prokaryotic Y89_3811 IPR024704 Structural maintenance of chromosomes protein Y89_3811 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3811 IPR036277 Y89_3811 Y89_3812 IPR000524 Transcription regulator HTH, GntR Y89_3812 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_3812 IPR011711 GntR, C-terminal Y89_3812 IPR036388 Y89_3812 Y89_3812 IPR036390 Y89_3812 Y89_3813 IPR005804 Fatty acid desaturase, type 1 Y89_3814 IPR001041 2Fe-2S ferredoxin-type domain Y89_3814 IPR002346 Molybdopterin dehydrogenase, FAD-binding Y89_3814 IPR002888 [2Fe-2S]-binding Y89_3814 IPR005107 CO dehydrogenase flavoprotein, C-terminal Y89_3814 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Y89_3814 IPR012175 Xanthine dehydrogenase, small subunit, bacteria Y89_3814 IPR012675 Beta-grasp domain Y89_3814 IPR014307 Xanthine dehydrogenase, small subunit Y89_3814 IPR016167 FAD-binding, type 2, subdomain 1 Y89_3814 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_3814 IPR036010 Y89_3814 Y89_3814 IPR036318 Y89_3814 Y89_3814 IPR036683 Y89_3814 Y89_3814 IPR036884 Y89_3814 Y89_3815 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Y89_3815 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding Y89_3815 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit Y89_3815 IPR036856 Y89_3815 Y89_3815 IPR037165 Y89_3815 Y89_3816 IPR003777 XdhC- CoxI Y89_3816 IPR014308 Xanthine dehydrogenase accessory protein XdhC Y89_3816 IPR027051 XdhC Rossmann domain Y89_3816 IPR036291 Y89_3816 Y89_3817 IPR006680 Amidohydrolase 1 Y89_3817 IPR011059 Metal-dependent hydrolase, composite domain Y89_3817 IPR014311 Guanine deaminase Y89_3817 IPR032466 Y89_3817 Y89_3818 IPR000524 Transcription regulator HTH, GntR Y89_3818 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_3818 IPR011711 GntR, C-terminal Y89_3818 IPR036388 Y89_3818 Y89_3818 IPR036390 Y89_3818 Y89_3819 IPR006043 Xanthine/uracil/vitamin C permease Y89_3819 IPR026033 Purine permease PbuG-like Y89_3820 IPR000895 Transthyretin/hydroxyisourate hydrolase Y89_3820 IPR014306 Hydroxyisourate hydrolase Y89_3820 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Y89_3820 IPR023418 Transthyretin, thyroxine binding site Y89_3820 IPR023419 Transthyretin, conserved site Y89_3820 IPR036817 Y89_3820 Y89_3821 IPR002509 Polysaccharide deacetylase Y89_3821 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Y89_3821 IPR017625 Putative urate catabolism protein Y89_3822 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 Y89_3822 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase Y89_3822 IPR036778 Y89_3822 Y89_3823 IPR005164 Allantoicase Y89_3823 IPR008979 Galactose-binding domain-like Y89_3823 IPR015908 Allantoicase domain Y89_3824 IPR007247 Ureidoglycolate hydrolase Y89_3824 IPR011051 RmlC-like cupin domain Y89_3824 IPR023525 Ureidoglycolate hydrolase, bacterial Y89_3824 IPR024060 Ureidoglycolate hydrolase domain Y89_3825 IPR010389 Protein of unknown function DUF989 Y89_3826 IPR008514 Type VI secretion system effector, Hcp Y89_3826 IPR036624 Y89_3826 Y89_3827 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Y89_3827 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Y89_3827 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal Y89_3827 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain Y89_3827 IPR037026 Y89_3827 Y89_3828 IPR029058 Alpha/Beta hydrolase fold Y89_3830 IPR008727 PAAR motif Y89_3831 IPR006042 Xanthine/uracil permease Y89_3831 IPR006043 Xanthine/uracil/vitamin C permease Y89_3831 IPR017588 Xanthine permease Y89_3832 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 Y89_3832 IPR036196 Y89_3832 Y89_3833 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Y89_3833 IPR006638 Elongator protein 3/MiaB/NifB Y89_3833 IPR007197 Radical SAM Y89_3833 IPR010505 Molybdenum cofactor synthesis C-terminal Y89_3833 IPR013483 Molybdenum cofactor biosynthesis protein A Y89_3833 IPR013785 Aldolase-type TIM barrel Y89_3834 IPR001647 DNA-binding HTH domain, TetR-type Y89_3834 IPR009057 Homeodomain-like Y89_3834 IPR013573 Transcription regulator YcdC, C-terminal Y89_3834 IPR036271 Y89_3834 Y89_3835 IPR005624 Domain of unknown function DUF336 Y89_3835 IPR038084 Y89_3835 Y89_3836 IPR006397 Glyoxylate carboligase Y89_3836 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Y89_3836 IPR012000 Thiamine pyrophosphate enzyme, central domain Y89_3836 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Y89_3836 IPR029035 DHS-like NAD/FAD-binding domain Y89_3836 IPR029061 Thiamin diphosphate-binding fold Y89_3837 IPR013022 Xylose isomerase-like, TIM barrel domain Y89_3837 IPR017643 Hydroxypyruvate isomerase Y89_3837 IPR026040 Hydroxypyruvate isomerase-like Y89_3837 IPR036237 Y89_3837 Y89_3838 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Y89_3838 IPR006398 2-hydroxy-3-oxopropionate reductase Y89_3838 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_3838 IPR013328 Dehydrogenase, multihelical Y89_3838 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type Y89_3838 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Y89_3838 IPR036291 Y89_3838 Y89_3839 IPR007835 MOFRL domain Y89_3839 IPR025286 MOFRL-associated domain Y89_3839 IPR037035 Y89_3839 Y89_3839 IPR038614 Y89_3839 Y89_3840 IPR001697 Pyruvate kinase Y89_3840 IPR011037 Pyruvate kinase-like, insert domain Y89_3840 IPR015793 Pyruvate kinase, barrel Y89_3840 IPR015795 Pyruvate kinase, C-terminal Y89_3840 IPR015806 Pyruvate kinase, beta-barrel insert domain Y89_3840 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_3840 IPR018209 Pyruvate kinase, active site Y89_3840 IPR036918 Y89_3840 Y89_3841 IPR004937 Urea transporter Y89_3841 IPR029020 Ammonium/urea transporter Y89_3842 IPR005821 Ion transport domain Y89_3842 IPR028325 Voltage-gated potassium channel Y89_3843 IPR009218 Predicted HD phosphohydrolase Y89_3844 IPR011935 Conserved hypothetical protein CHP02231 Y89_3844 IPR025554 Domain of unknown function DUF4140 Y89_3844 IPR037291 Y89_3844 Y89_3845 IPR005669 Thiosulphate/Sulfate-binding protein Y89_3846 IPR015235 Domain of unknown function DUF1937 Y89_3846 IPR027269 Hypothetical PA1492 domain Y89_3847 IPR007441 Ethanolamine utilisation protein EutH Y89_3848 IPR001034 HTH DeoR N-terminal domain Y89_3848 IPR014036 DeoR C-terminal sensor domain Y89_3848 IPR018356 Transcription regulator, HTH DeoR-type, conserved site Y89_3848 IPR036388 Y89_3848 Y89_3848 IPR036390 Y89_3848 Y89_3848 IPR037171 Y89_3848 Y89_3849 IPR006076 FAD dependent oxidoreductase Y89_3849 IPR007419 BFD-like [2Fe-2S]-binding domain Y89_3849 IPR036188 Y89_3849 Y89_3850 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II Y89_3850 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_3850 IPR036188 Y89_3850 Y89_3851 IPR000577 Y89_3851 Y89_3851 IPR018483 Carbohydrate kinase, FGGY, conserved site Y89_3851 IPR018484 Carbohydrate kinase, FGGY, N-terminal Y89_3851 IPR018485 Carbohydrate kinase, FGGY, C-terminal Y89_3852 IPR005321 Peptidase S58, DmpA Y89_3852 IPR016117 ArgJ-like domain Y89_3853 IPR002293 Amino acid/polyamine transporter I Y89_3854 IPR000792 Transcription regulator LuxR, C-terminal Y89_3854 IPR016032 Signal transduction response regulator, C-terminal effector Y89_3854 IPR036388 Y89_3854 Y89_3856 IPR011990 Tetratricopeptide-like helical domain Y89_3856 IPR017560 Cytochrome c-type biogenesis protein CcmI Y89_3856 IPR019734 Tetratricopeptide repeat Y89_3857 IPR005616 Cytochrome C biogenesis protein CcmH Y89_3857 IPR038297 Y89_3857 Y89_3858 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE Y89_3858 IPR013740 Redoxin Y89_3858 IPR017937 Thioredoxin, conserved site Y89_3858 IPR036249 Y89_3858 Y89_3859 IPR002541 Cytochrome c assembly protein Y89_3859 IPR003567 Cytochrome c-type biogenesis protein Y89_3859 IPR003568 Cytochrome c-type biogenesis protein CcmF Y89_3859 IPR032523 Y89_3859 Y89_3860 IPR004329 CcmE/CycJ protein Y89_3860 IPR036127 Y89_3860 Y89_3861 IPR007078 Haem exporter protein D (CcmD) Y89_3862 IPR002541 Cytochrome c assembly protein Y89_3862 IPR003557 Cytochrome c-type biogenesis protein CcmC Y89_3863 IPR003544 Cytochrome c-type biogenesis protein CcmB Y89_3863 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Y89_3864 IPR003439 ABC transporter-like Y89_3864 IPR003593 AAA+ ATPase domain Y89_3864 IPR005895 ABC transporter, haem export, CcmA Y89_3864 IPR017871 ABC transporter, conserved site Y89_3864 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3865 IPR021136 Flagellar hook-length control protein-like, C-terminal Y89_3866 IPR006135 Type III secretion system substrate exporter Y89_3866 IPR029025 Type III secretion system substrate exporter, C-terminal Y89_3867 IPR000182 GNAT domain Y89_3867 IPR016181 Acyl-CoA N-acyltransferase Y89_3869 IPR002347 Glucose/ribitol dehydrogenase Y89_3869 IPR036291 Y89_3869 Y89_3870 IPR003730 Multi-copper polyphenol oxidoreductase, laccase Y89_3870 IPR011324 Cytotoxic necrotizing factor-like, catalytic Y89_3870 IPR038371 Y89_3870 Y89_3872 IPR013196 Helix-turn-helix, type 11 Y89_3872 IPR026881 WYL domain Y89_3872 IPR028349 Protein PafB/PafC Y89_3872 IPR036388 Y89_3872 Y89_3872 IPR036390 Y89_3872 Y89_3873 IPR004045 Glutathione S-transferase, N-terminal Y89_3873 IPR004046 Glutathione S-transferase, C-terminal Y89_3873 IPR036249 Y89_3873 Y89_3873 IPR036282 Y89_3873 Y89_3874 IPR021244 Protein of unknown function DUF2802 Y89_3875 IPR002545 CheW-like protein Y89_3875 IPR036061 Y89_3875 Y89_3876 IPR002545 CheW-like protein Y89_3876 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like Y89_3876 IPR036061 Y89_3876 Y89_3877 IPR025669 AAA domain Y89_3877 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3878 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_3878 IPR025713 Motility protein B, N-terminal domain Y89_3878 IPR036737 Y89_3878 Y89_3879 IPR002898 MotA/TolQ/ExbB proton channel Y89_3880 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Y89_3880 IPR001789 Signal transduction response regulator, receiver domain Y89_3880 IPR008248 Signal transduction response regulator, chemotaxis, CheB Y89_3880 IPR011006 CheY-like superfamily Y89_3880 IPR035909 Y89_3880 Y89_3881 IPR002545 CheW-like protein Y89_3881 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_3881 IPR004105 Histidine kinase CheA-like, homodimeric domain Y89_3881 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_3881 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_3881 IPR036061 Y89_3881 Y89_3881 IPR036097 Y89_3881 Y89_3881 IPR036641 Y89_3881 Y89_3881 IPR036890 Y89_3881 Y89_3881 IPR037006 Y89_3881 Y89_3882 IPR007439 Chemotaxis phosphatase, CheZ Y89_3883 IPR001789 Signal transduction response regulator, receiver domain Y89_3883 IPR011006 CheY-like superfamily Y89_3884 IPR000943 RNA polymerase sigma-70 Y89_3884 IPR007624 RNA polymerase sigma-70 region 3 Y89_3884 IPR007627 RNA polymerase sigma-70 region 2 Y89_3884 IPR007630 RNA polymerase sigma-70 region 4 Y89_3884 IPR012845 RNA polymerase sigma factor, FliA/WhiG Y89_3884 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_3884 IPR013325 RNA polymerase sigma factor, region 2 Y89_3884 IPR014284 RNA polymerase sigma-70 like domain Y89_3884 IPR028617 RNA polymerase sigma factor FliA Y89_3885 IPR025501 ATP binding protein MinD Y89_3885 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3885 IPR033756 Y89_3885 Y89_3886 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Y89_3886 IPR003593 AAA+ ATPase domain Y89_3886 IPR020006 Signal-recognition particle (SRP)-type GTPase Y89_3886 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3887 IPR001712 Type III secretion system FHIPEP Y89_3887 IPR006301 Flagellar biosynthesis protein FlhA Y89_3887 IPR025505 FHIPEP conserved site Y89_3888 IPR007621 TPM domain Y89_3889 IPR007621 TPM domain Y89_3890 IPR006135 Type III secretion system substrate exporter Y89_3890 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB Y89_3890 IPR029025 Type III secretion system substrate exporter, C-terminal Y89_3891 IPR002010 Type III secretion system inner membrane R protein Y89_3891 IPR006303 Flagellar biosynthesis protein FliR Y89_3892 IPR002191 Bacterial export protein family 3 Y89_3892 IPR006305 Flagellar biosynthesis protein FliQ Y89_3893 IPR005837 Flagellar transport protein FliP Y89_3893 IPR005838 Type III secretion system inner membrane P protein Y89_3894 IPR022781 Flagellar biosynthesis protein, FliO Y89_3895 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb Y89_3895 IPR001543 Surface presentation of antigen (SpoA) Y89_3895 IPR012826 Flagellar motor switch FliN Y89_3895 IPR036429 Y89_3895 Y89_3896 IPR001543 Surface presentation of antigen (SpoA) Y89_3896 IPR001689 Flagellar motor switch protein FliM Y89_3896 IPR028976 CheC-like domain Y89_3896 IPR036429 Y89_3896 Y89_3897 IPR005503 Flagellar basal body-associated protein FliL Y89_3898 IPR021136 Flagellar hook-length control protein-like, C-terminal Y89_3898 IPR038610 Y89_3898 Y89_3899 IPR011978 Uncharacterised protein family UPF0149 Y89_3899 IPR036255 Y89_3899 Y89_3900 IPR007401 Protein of unknown function DUF454 Y89_3901 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_3901 IPR003660 HAMP linker domain Y89_3901 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_3901 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_3901 IPR006290 Heavy metal sensor kinase Y89_3901 IPR036097 Y89_3901 Y89_3901 IPR036890 Y89_3901 Y89_3902 IPR001789 Signal transduction response regulator, receiver domain Y89_3902 IPR001867 Signal transduction response regulator, C-terminal Y89_3902 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response Y89_3902 IPR011006 CheY-like superfamily Y89_3902 IPR036388 Y89_3902 Y89_3903 IPR001036 Acriflavin resistance protein Y89_3903 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_3904 IPR006143 RND efflux pump, membrane fusion protein Y89_3904 IPR032317 Y89_3904 Y89_3905 IPR010319 Transglutaminase-like cysteine peptidase, predicted Y89_3905 IPR038765 Y89_3905 Y89_3906 IPR000160 GGDEF domain Y89_3906 IPR001633 EAL domain Y89_3906 IPR003660 HAMP linker domain Y89_3906 IPR029787 Nucleotide cyclase Y89_3906 IPR032244 Y89_3906 Y89_3906 IPR035919 Y89_3906 Y89_3907 IPR001690 Autoinducer synthesis protein Y89_3907 IPR016181 Acyl-CoA N-acyltransferase Y89_3907 IPR018311 Autoinducer synthesis, conserved site Y89_3908 IPR010982 Lambda repressor-like, DNA-binding domain Y89_3909 IPR000792 Transcription regulator LuxR, C-terminal Y89_3909 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Y89_3909 IPR016032 Signal transduction response regulator, C-terminal effector Y89_3909 IPR036388 Y89_3909 Y89_3909 IPR036693 Y89_3909 Y89_3910 IPR001757 Cation-transporting P-type ATPase Y89_3910 IPR004014 Cation-transporting P-type ATPase, N-terminal Y89_3910 IPR006068 Cation-transporting P-type ATPase, C-terminal Y89_3910 IPR008250 P-type ATPase, A domain Y89_3910 IPR018303 P-type ATPase, phosphorylation site Y89_3910 IPR023214 HAD-like domain Y89_3910 IPR023298 P-type ATPase, transmembrane domain Y89_3910 IPR023299 P-type ATPase, cytoplasmic domain N Y89_3910 IPR036412 Y89_3910 Y89_3911 IPR000182 GNAT domain Y89_3911 IPR016181 Acyl-CoA N-acyltransferase Y89_3912 IPR025388 Alginate export domain Y89_3913 IPR000917 Sulfatase Y89_3913 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_3913 IPR017850 Alkaline-phosphatase-like, core domain Y89_3914 IPR010177 Doubled CXXCH motif Y89_3914 IPR011990 Tetratricopeptide-like helical domain Y89_3914 IPR016024 Armadillo-type fold Y89_3914 IPR019734 Tetratricopeptide repeat Y89_3914 IPR023155 Cytochrome c-552/4 Y89_3914 IPR036280 Y89_3914 Y89_3915 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Y89_3915 IPR036922 Y89_3915 Y89_3916 IPR005545 YCII-related Y89_3916 IPR011008 Dimeric alpha-beta barrel Y89_3917 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal Y89_3917 IPR007535 Catechol dioxygenase, N-terminal Y89_3917 IPR015889 Intradiol ring-cleavage dioxygenase, core Y89_3918 IPR001670 Alcohol dehydrogenase, iron-type Y89_3919 IPR015590 Aldehyde dehydrogenase domain Y89_3919 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_3919 IPR016161 Aldehyde/histidinol dehydrogenase Y89_3919 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_3919 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_3920 IPR011051 RmlC-like cupin domain Y89_3920 IPR014710 RmlC-like jelly roll fold Y89_3921 IPR011051 RmlC-like cupin domain Y89_3922 IPR000847 Transcription regulator HTH, LysR Y89_3922 IPR005119 LysR, substrate-binding Y89_3922 IPR036388 Y89_3922 Y89_3922 IPR036390 Y89_3922 Y89_3923 IPR003439 ABC transporter-like Y89_3923 IPR003593 AAA+ ATPase domain Y89_3923 IPR017871 ABC transporter, conserved site Y89_3923 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3925 IPR005636 DTW Y89_3926 IPR000014 PAS domain Y89_3926 IPR001610 PAC motif Y89_3926 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_3926 IPR013655 PAS fold-3 Y89_3926 IPR035965 Y89_3926 Y89_3927 IPR000847 Transcription regulator HTH, LysR Y89_3927 IPR005119 LysR, substrate-binding Y89_3927 IPR036388 Y89_3927 Y89_3927 IPR036390 Y89_3927 Y89_3928 IPR005925 Agmatinase-related Y89_3928 IPR006035 Ureohydrolase Y89_3928 IPR020855 Ureohydrolase, manganese-binding site Y89_3928 IPR023696 Ureohydrolase domain Y89_3929 IPR032710 Y89_3929 Y89_3929 IPR037401 Y89_3929 Y89_3930 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin Y89_3930 IPR026030 Purine-cytosine permease Y89_3930 IPR038271 Y89_3930 Y89_3931 IPR001734 Sodium/solute symporter Y89_3931 IPR038377 Y89_3931 Y89_3932 IPR000399 TPP-binding enzyme, conserved site Y89_3932 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Y89_3932 IPR012000 Thiamine pyrophosphate enzyme, central domain Y89_3932 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Y89_3932 IPR029035 DHS-like NAD/FAD-binding domain Y89_3932 IPR029061 Thiamin diphosphate-binding fold Y89_3933 IPR004113 FAD-linked oxidase, C-terminal Y89_3933 IPR006094 FAD linked oxidase, N-terminal Y89_3933 IPR016164 FAD-linked oxidase-like, C-terminal Y89_3933 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Y89_3933 IPR036318 Y89_3933 Y89_3934 IPR001279 Beta-lactamase-like Y89_3934 IPR036866 Y89_3934 Y89_3936 IPR000847 Transcription regulator HTH, LysR Y89_3936 IPR005119 LysR, substrate-binding Y89_3936 IPR036388 Y89_3936 Y89_3936 IPR036390 Y89_3936 Y89_3937 IPR010645 Domain of unknown function DUF1228 Y89_3937 IPR036259 Y89_3937 Y89_3938 IPR000620 Drug/metabolite transporter Y89_3939 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Y89_3939 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_3940 IPR000286 Histone deacetylase superfamily Y89_3940 IPR023696 Ureohydrolase domain Y89_3940 IPR023801 Histone deacetylase domain Y89_3940 IPR037138 Y89_3940 Y89_3941 IPR006685 Mechanosensitive ion channel MscS Y89_3941 IPR010920 Like-Sm (LSM) domain Y89_3941 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Y89_3941 IPR011066 Mechanosensitive ion channel MscS, C-terminal Y89_3941 IPR022249 Protein of unknown function DUF3772 Y89_3941 IPR023408 Y89_3941 Y89_3942 IPR019614 S-adenosylmethionine-dependent methyltransferase Y89_3942 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3943 IPR002934 Nucleotidyl transferase domain Y89_3944 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3944 IPR034739 Y89_3944 Y89_3946 IPR001647 DNA-binding HTH domain, TetR-type Y89_3946 IPR009057 Homeodomain-like Y89_3947 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_3948 IPR009959 Polyketide cyclase SnoaL-like domain Y89_3948 IPR032710 Y89_3948 Y89_3949 IPR000089 Biotin/lipoyl attachment Y89_3949 IPR001882 Biotin-binding site Y89_3949 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Y89_3949 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal Y89_3949 IPR005482 Biotin carboxylase, C-terminal Y89_3949 IPR011053 Single hybrid motif Y89_3949 IPR011054 Rudiment single hybrid motif Y89_3949 IPR013815 ATP-grasp fold, subdomain 1 Y89_3949 IPR016185 Pre-ATP-grasp domain Y89_3949 IPR029045 ClpP/crotonase-like domain Y89_3949 IPR034733 Y89_3949 Y89_3950 IPR000847 Transcription regulator HTH, LysR Y89_3950 IPR005119 LysR, substrate-binding Y89_3950 IPR036388 Y89_3950 Y89_3950 IPR036390 Y89_3950 Y89_3952 IPR000792 Transcription regulator LuxR, C-terminal Y89_3952 IPR001789 Signal transduction response regulator, receiver domain Y89_3952 IPR011006 CheY-like superfamily Y89_3952 IPR016032 Signal transduction response regulator, C-terminal effector Y89_3952 IPR036388 Y89_3952 Y89_3953 IPR001789 Signal transduction response regulator, receiver domain Y89_3953 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_3953 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_3953 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_3953 IPR011006 CheY-like superfamily Y89_3953 IPR036097 Y89_3953 Y89_3953 IPR036890 Y89_3953 Y89_3956 IPR002891 Adenylylsulphate kinase Y89_3956 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3957 IPR014556 Uncharacterised conserved protein UCP029407 Y89_3957 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3958 IPR001296 Glycosyl transferase, family 1 Y89_3959 IPR001173 Glycosyltransferase 2-like Y89_3959 IPR029044 Nucleotide-diphospho-sugar transferases Y89_3961 IPR001173 Glycosyltransferase 2-like Y89_3961 IPR029044 Nucleotide-diphospho-sugar transferases Y89_3962 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3963 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3963 IPR029439 Wzt, C-terminal Y89_3964 IPR001296 Glycosyl transferase, family 1 Y89_3965 IPR005886 UDP-glucose 4-epimerase GalE Y89_3965 IPR016040 NAD(P)-binding domain Y89_3965 IPR036291 Y89_3965 Y89_3967 IPR001775 GspD/PilQ family Y89_3967 IPR004846 Type II/III secretion system Y89_3967 IPR005644 NolW-like Y89_3967 IPR038591 Y89_3967 Y89_3969 IPR009057 Homeodomain-like Y89_3969 IPR009594 Transcription regulator HTH, AraC, N-terminal Y89_3969 IPR018060 DNA binding HTH domain, AraC-type Y89_3970 IPR002347 Glucose/ribitol dehydrogenase Y89_3970 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_3970 IPR036291 Y89_3970 Y89_3972 IPR000182 GNAT domain Y89_3972 IPR016181 Acyl-CoA N-acyltransferase Y89_3973 IPR010452 Isocitrate dehydrogenase kinasephosphatase Y89_3974 IPR002514 Transposase IS3/IS911family Y89_3974 IPR009057 Homeodomain-like Y89_3975 IPR005502 ADP-ribosylation/Crystallin J1 Y89_3975 IPR036705 Y89_3975 Y89_3976 IPR029494 Domain of unknown function DUF4433 Y89_3977 IPR014017 DNA helicase, UvrD-like, C-terminal Y89_3977 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_3979 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y89_3979 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Y89_3979 IPR020921 Erythronate-4-phosphate dehydrogenase Y89_3979 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain Y89_3979 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y89_3979 IPR036291 Y89_3979 Y89_3979 IPR038251 Y89_3979 Y89_3980 IPR002577 Helix-turn-helix, HxlR type Y89_3980 IPR036388 Y89_3980 Y89_3980 IPR036390 Y89_3980 Y89_3981 IPR014030 Beta-ketoacyl synthase, N-terminal Y89_3981 IPR014031 Beta-ketoacyl synthase, C-terminal Y89_3981 IPR016039 Thiolase-like Y89_3981 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 Y89_3981 IPR018201 Beta-ketoacyl synthase, active site Y89_3981 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Y89_3983 IPR003719 Phenazine biosynthesis PhzF protein Y89_3984 IPR000531 TonB-dependent receptor, beta-barrel Y89_3984 IPR010105 TonB-dependent siderophore receptor Y89_3984 IPR011662 Secretin/TonB, short N-terminal Y89_3984 IPR012910 TonB-dependent receptor, plug Y89_3984 IPR036942 Y89_3984 Y89_3984 IPR037066 Y89_3984 Y89_3985 IPR006860 FecR protein Y89_3985 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_3985 IPR032508 Y89_3985 Y89_3986 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_3986 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_3986 IPR013325 RNA polymerase sigma factor, region 2 Y89_3986 IPR014284 RNA polymerase sigma-70 like domain Y89_3986 IPR036388 Y89_3986 Y89_3988 IPR002528 Multi antimicrobial extrusion protein Y89_3989 IPR000620 Drug/metabolite transporter Y89_3990 IPR001387 Cro/C1-type helix-turn-helix domain Y89_3990 IPR010982 Lambda repressor-like, DNA-binding domain Y89_3990 IPR011051 RmlC-like cupin domain Y89_3990 IPR013096 Cupin 2, conserved barrel Y89_3990 IPR014710 RmlC-like jelly roll fold Y89_3991 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase Y89_3991 IPR027259 Predicted 3-demethylubiquinone-9 3-methyltransferase, bacterial Y89_3991 IPR028973 3-demethylubiquinone-9 3-methyltransferase Y89_3991 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_3992 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Y89_3992 IPR036754 Y89_3992 Y89_3993 IPR015943 WD40/YVTN repeat-like-containing domain Y89_3994 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Y89_3994 IPR012675 Beta-grasp domain Y89_3994 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Y89_3995 IPR005545 YCII-related Y89_3995 IPR011008 Dimeric alpha-beta barrel Y89_3996 IPR028973 3-demethylubiquinone-9 3-methyltransferase Y89_3996 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_3997 IPR011701 Major facilitator superfamily Y89_3997 IPR036259 Y89_3997 Y89_3998 IPR007627 RNA polymerase sigma-70 region 2 Y89_3998 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_3998 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_3998 IPR013325 RNA polymerase sigma factor, region 2 Y89_3998 IPR014284 RNA polymerase sigma-70 like domain Y89_3998 IPR036388 Y89_3998 Y89_3999 IPR010296 Protein of unknown function DUF899, thioredoxin-like Y89_3999 IPR036249 Y89_3999 Y89_4001 IPR005545 YCII-related Y89_4001 IPR011008 Dimeric alpha-beta barrel Y89_4003 IPR000792 Transcription regulator LuxR, C-terminal Y89_4003 IPR013656 PAS fold-4 Y89_4003 IPR016032 Signal transduction response regulator, C-terminal effector Y89_4003 IPR036388 Y89_4003 Y89_4004 IPR000310 Orn/Lys/Arg decarboxylase, major domain Y89_4004 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal Y89_4004 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal Y89_4004 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_4004 IPR015424 Pyridoxal phosphate-dependent transferase Y89_4004 IPR036633 Y89_4004 Y89_4005 IPR013651 ATP-grasp fold, RimK-type Y89_4005 IPR013815 ATP-grasp fold, subdomain 1 Y89_4005 IPR025839 RimK-like ATPgrasp N-terminal domain Y89_4006 IPR002347 Glucose/ribitol dehydrogenase Y89_4006 IPR036291 Y89_4006 Y89_4008 IPR001638 Extracellular solute-binding protein, family 3 Y89_4009 IPR000515 MetI-like domain Y89_4009 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_4009 IPR035906 Y89_4009 Y89_4010 IPR000515 MetI-like domain Y89_4010 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_4010 IPR035906 Y89_4010 Y89_4011 IPR003439 ABC transporter-like Y89_4011 IPR003593 AAA+ ATPase domain Y89_4011 IPR017871 ABC transporter, conserved site Y89_4011 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4011 IPR030679 Y89_4011 Y89_4012 IPR000101 Gamma-glutamyltranspeptidase Y89_4012 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_4013 IPR004550 L-asparaginase, type II Y89_4013 IPR006034 Asparaginase/glutaminase Y89_4013 IPR020827 Asparaginase/glutaminase, active site 1 Y89_4013 IPR027473 L-asparaginase, C-terminal domain Y89_4013 IPR027474 L-asparaginase, N-terminal Y89_4013 IPR027475 Asparaginase/glutaminase, active site 2 Y89_4013 IPR036152 Y89_4013 Y89_4013 IPR037152 Y89_4013 Y89_4014 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4014 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4014 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4014 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) Y89_4014 IPR029151 Periplasmic sensor domain-like Y89_4014 IPR033479 Y89_4014 Y89_4014 IPR036097 Y89_4014 Y89_4014 IPR036890 Y89_4014 Y89_4015 IPR001789 Signal transduction response regulator, receiver domain Y89_4015 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_4015 IPR002197 DNA binding HTH domain, Fis-type Y89_4015 IPR003593 AAA+ ATPase domain Y89_4015 IPR009057 Homeodomain-like Y89_4015 IPR011006 CheY-like superfamily Y89_4015 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_4015 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_4015 IPR025944 Sigma-54 interaction domain, conserved site Y89_4015 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_4016 IPR013785 Aldolase-type TIM barrel Y89_4018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4019 IPR000644 CBS domain Y89_4019 IPR005170 Transporter-associated domain Y89_4019 IPR005496 Integral membrane protein TerC Y89_4019 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_4019 IPR036318 Y89_4019 Y89_4020 IPR002347 Glucose/ribitol dehydrogenase Y89_4020 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_4020 IPR036291 Y89_4020 Y89_4021 IPR005624 Domain of unknown function DUF336 Y89_4021 IPR038084 Y89_4021 Y89_4022 IPR000847 Transcription regulator HTH, LysR Y89_4022 IPR005119 LysR, substrate-binding Y89_4022 IPR036388 Y89_4022 Y89_4022 IPR036390 Y89_4022 Y89_4023 IPR001604 DNA/RNA non-specific endonuclease Y89_4023 IPR008256 Peptidase S1B Y89_4023 IPR009003 Trypsin-like cysteine/serine peptidase domain Y89_4023 IPR020821 Extracellular Endonuclease, subunit A Y89_4024 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Y89_4024 IPR001721 ACT-like domain Y89_4024 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_4024 IPR005787 Threonine dehydratase, biosynthetic Y89_4024 IPR036052 Y89_4024 Y89_4024 IPR038110 Y89_4024 Y89_4025 IPR011944 Steroid delta5-4-isomerase Y89_4025 IPR032710 Y89_4025 Y89_4025 IPR037401 Y89_4025 Y89_4026 IPR013783 Immunoglobulin-like fold Y89_4027 IPR010279 Protein of unknown function DUF883, ElaB Y89_4028 IPR000531 TonB-dependent receptor, beta-barrel Y89_4028 IPR010105 TonB-dependent siderophore receptor Y89_4028 IPR010917 TonB-dependent receptor, conserved site Y89_4028 IPR012910 TonB-dependent receptor, plug Y89_4028 IPR036942 Y89_4028 Y89_4028 IPR037066 Y89_4028 Y89_4029 IPR000537 UbiA prenyltransferase family Y89_4029 IPR006369 Protohaem IX farnesyltransferase Y89_4029 IPR030470 Y89_4029 Y89_4030 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes Y89_4030 IPR014210 Cytochrome o ubiquinol oxidase subunit IV Y89_4031 IPR000298 Cytochrome c oxidase subunit III domain Y89_4031 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle Y89_4031 IPR014206 Cytochrome o ubiquinol oxidase, subunit III Y89_4031 IPR035973 Y89_4031 Y89_4032 IPR000883 Cytochrome c oxidase subunit I Y89_4032 IPR014207 Cytochrome o ubiquinol oxidase, subunit I Y89_4032 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Y89_4032 IPR036927 Y89_4032 Y89_4033 IPR002429 Cytochrome c oxidase subunit II C-terminal Y89_4033 IPR006333 Cytochrome o ubiquinol oxidase subunit II Y89_4033 IPR008972 Cupredoxin Y89_4033 IPR010514 COX aromatic rich motif Y89_4033 IPR036257 Y89_4033 Y89_4034 IPR005829 Sugar transporter, conserved site Y89_4034 IPR011701 Major facilitator superfamily Y89_4034 IPR036259 Y89_4034 Y89_4035 IPR001647 DNA-binding HTH domain, TetR-type Y89_4035 IPR009057 Homeodomain-like Y89_4035 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y89_4035 IPR036271 Y89_4035 Y89_4036 IPR016918 Uncharacterised conserved protein UCP029394 Y89_4036 IPR027843 Domain of unknown function DUF4440 Y89_4036 IPR032710 Y89_4036 Y89_4037 IPR011701 Major facilitator superfamily Y89_4037 IPR036259 Y89_4037 Y89_4038 IPR000847 Transcription regulator HTH, LysR Y89_4038 IPR005119 LysR, substrate-binding Y89_4038 IPR036388 Y89_4038 Y89_4038 IPR036390 Y89_4038 Y89_4039 IPR006323 Phosphonoacetaldehyde hydrolase Y89_4039 IPR006439 HAD hydrolase, subfamily IA Y89_4039 IPR023198 Phosphoglycolate phosphatase, domain 2 Y89_4039 IPR023214 HAD-like domain Y89_4039 IPR036412 Y89_4039 Y89_4040 IPR000192 Aminotransferase class V domain Y89_4040 IPR012703 2-aminoethylphosphonate--pyruvate transaminase Y89_4040 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_4040 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_4040 IPR015424 Pyridoxal phosphate-dependent transferase Y89_4040 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase Y89_4041 IPR000847 Transcription regulator HTH, LysR Y89_4041 IPR005119 LysR, substrate-binding Y89_4041 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type Y89_4041 IPR036388 Y89_4041 Y89_4041 IPR036390 Y89_4041 Y89_4042 IPR016917 Uncharacterised conserved protein UCP029393 Y89_4042 IPR022584 Protein of unknown function DUF2937 Y89_4043 IPR026869 Putative glutamine amidotransferase type 2 Y89_4043 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_4044 IPR001310 Histidine triad (HIT) protein Y89_4044 IPR019808 Histidine triad, conserved site Y89_4044 IPR036265 Y89_4044 Y89_4046 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain Y89_4046 IPR002470 Peptidase S9A, prolyl oligopeptidase Y89_4046 IPR023302 Peptidase S9A, N-terminal domain Y89_4046 IPR029058 Alpha/Beta hydrolase fold Y89_4047 IPR000223 Peptidase S26A, signal peptidase I Y89_4047 IPR015927 Peptidase S24/S26A/S26B/S26C Y89_4047 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Y89_4047 IPR019758 Peptidase S26A, signal peptidase I, conserved site Y89_4047 IPR036286 Y89_4047 Y89_4048 IPR000531 TonB-dependent receptor, beta-barrel Y89_4048 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor Y89_4048 IPR011276 TonB-dependent haem/haemoglobin receptor Y89_4048 IPR011662 Secretin/TonB, short N-terminal Y89_4048 IPR012910 TonB-dependent receptor, plug Y89_4048 IPR036942 Y89_4048 Y89_4048 IPR037066 Y89_4048 Y89_4049 IPR006860 FecR protein Y89_4049 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_4049 IPR032508 Y89_4049 Y89_4049 IPR032623 Y89_4049 Y89_4050 IPR007627 RNA polymerase sigma-70 region 2 Y89_4050 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_4050 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_4050 IPR013325 RNA polymerase sigma factor, region 2 Y89_4050 IPR014284 RNA polymerase sigma-70 like domain Y89_4050 IPR036388 Y89_4050 Y89_4051 IPR005358 Putative zinc- or iron-chelating domain containing protein Y89_4051 IPR008228 Uncharacterised conserved protein UCP006173 Y89_4052 IPR003735 Metal-sensitive transcriptional repressor Y89_4052 IPR038390 Y89_4052 Y89_4053 IPR002524 Cation efflux protein Y89_4053 IPR027469 Cation efflux protein transmembrane domain Y89_4054 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Y89_4054 IPR036291 Y89_4054 Y89_4055 IPR027354 YcgL domain Y89_4055 IPR038068 Y89_4055 Y89_4056 IPR002121 HRDC domain Y89_4056 IPR002562 3'-5' exonuclease domain Y89_4056 IPR006292 Ribonuclease D Y89_4056 IPR010997 HRDC-like Y89_4056 IPR012337 Ribonuclease H-like domain Y89_4056 IPR036397 Y89_4056 Y89_4057 IPR011042 Six-bladed beta-propeller, TolB-like Y89_4057 IPR018119 Strictosidine synthase, conserved region Y89_4058 IPR001763 Rhodanese-like domain Y89_4058 IPR036873 Y89_4058 Y89_4059 IPR000073 Alpha/beta hydrolase fold-1 Y89_4059 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 Y89_4059 IPR029058 Alpha/Beta hydrolase fold Y89_4060 IPR001647 DNA-binding HTH domain, TetR-type Y89_4060 IPR009057 Homeodomain-like Y89_4060 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y89_4062 IPR005017 Membrane protein, aromatic hydrocarbon degradation Y89_4063 IPR000889 Glutathione peroxidase Y89_4063 IPR029759 Glutathione peroxidase active site Y89_4063 IPR036249 Y89_4063 Y89_4064 IPR011701 Major facilitator superfamily Y89_4064 IPR036259 Y89_4064 Y89_4065 IPR000835 MarR-type HTH domain Y89_4065 IPR036388 Y89_4065 Y89_4065 IPR036390 Y89_4065 Y89_4066 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_4066 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_4066 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_4066 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_4066 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Y89_4066 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Y89_4066 IPR036250 Y89_4066 Y89_4066 IPR037069 Y89_4066 Y89_4067 IPR001647 DNA-binding HTH domain, TetR-type Y89_4067 IPR009057 Homeodomain-like Y89_4068 IPR011701 Major facilitator superfamily Y89_4068 IPR036259 Y89_4068 Y89_4069 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase Y89_4070 IPR013078 Histidine phosphatase superfamily, clade-1 Y89_4070 IPR029033 Histidine phosphatase superfamily Y89_4071 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like Y89_4071 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic Y89_4071 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal Y89_4071 IPR036087 Y89_4071 Y89_4072 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase Y89_4072 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4073 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Y89_4073 IPR004459 Cobyric acid synthase CobQ Y89_4073 IPR011698 CobB/CobQ-like glutamine amidotransferase Y89_4073 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4073 IPR029062 Class I glutamine amidotransferase-like Y89_4074 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Y89_4074 IPR004839 Aminotransferase, class I/classII Y89_4074 IPR005860 L-threonine-O-3-phosphate decarboxylase Y89_4074 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_4074 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_4074 IPR015424 Pyridoxal phosphate-dependent transferase Y89_4075 IPR004485 Cobalamin biosynthesis CobD/CbiB Y89_4076 IPR000415 Nitroreductase-like Y89_4076 IPR012825 5,6-dimethylbenzimidazole synthase BluB Y89_4076 IPR029479 Nitroreductase Y89_4077 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Y89_4077 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA Y89_4077 IPR011698 CobB/CobQ-like glutamine amidotransferase Y89_4077 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4077 IPR029062 Class I glutamine amidotransferase-like Y89_4078 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR Y89_4078 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain Y89_4078 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4079 IPR000531 TonB-dependent receptor, beta-barrel Y89_4079 IPR010101 TonB-dependent vitamin B12 transporter BtuB Y89_4079 IPR012910 TonB-dependent receptor, plug Y89_4079 IPR036942 Y89_4079 Y89_4079 IPR037066 Y89_4079 Y89_4080 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein Y89_4081 IPR000524 Transcription regulator HTH, GntR Y89_4081 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_4081 IPR011711 GntR, C-terminal Y89_4081 IPR036388 Y89_4081 Y89_4081 IPR036390 Y89_4081 Y89_4082 IPR008794 Proline racemase family Y89_4083 IPR006076 FAD dependent oxidoreductase Y89_4083 IPR036188 Y89_4083 Y89_4084 IPR036010 Y89_4084 Y89_4085 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II Y89_4085 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B Y89_4085 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_4085 IPR036188 Y89_4085 Y89_4086 IPR000620 Drug/metabolite transporter Y89_4087 IPR000847 Transcription regulator HTH, LysR Y89_4087 IPR005119 LysR, substrate-binding Y89_4087 IPR036388 Y89_4087 Y89_4087 IPR036390 Y89_4087 Y89_4088 IPR001387 Cro/C1-type helix-turn-helix domain Y89_4088 IPR010982 Lambda repressor-like, DNA-binding domain Y89_4089 IPR011701 Major facilitator superfamily Y89_4089 IPR036259 Y89_4089 Y89_4090 IPR009057 Homeodomain-like Y89_4090 IPR013656 PAS fold-4 Y89_4090 IPR018060 DNA binding HTH domain, AraC-type Y89_4090 IPR018062 HTH domain AraC-type, conserved site Y89_4090 IPR020449 Transcription regulator HTH, AraC- type Y89_4090 IPR035965 Y89_4090 Y89_4091 IPR001638 Extracellular solute-binding protein, family 3 Y89_4092 IPR002840 Domain of unknown function DUF126 Y89_4092 IPR007506 Domain of unknown function DUF521 Y89_4092 IPR012047 Uncharacterised conserved protein UCP036630 Y89_4092 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Y89_4092 IPR036008 Y89_4092 Y89_4093 IPR000515 MetI-like domain Y89_4093 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_4093 IPR035906 Y89_4093 Y89_4094 IPR000515 MetI-like domain Y89_4094 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_4094 IPR035906 Y89_4094 Y89_4095 IPR003439 ABC transporter-like Y89_4095 IPR003593 AAA+ ATPase domain Y89_4095 IPR017871 ABC transporter, conserved site Y89_4095 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4095 IPR030679 Y89_4095 Y89_4096 IPR008794 Proline racemase family Y89_4097 IPR002220 DapA-like Y89_4097 IPR013785 Aldolase-type TIM barrel Y89_4098 IPR015590 Aldehyde dehydrogenase domain Y89_4098 IPR016161 Aldehyde/histidinol dehydrogenase Y89_4098 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_4098 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_4099 IPR003767 Malate/L-lactate dehydrogenase Y89_4099 IPR036111 Y89_4099 Y89_4100 IPR003660 HAMP linker domain Y89_4100 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_4100 IPR004090 Chemotaxis methyl-accepting receptor Y89_4100 IPR024478 4HB MCP domain Y89_4101 IPR003086 Metalloprotease inhibitor I38 Y89_4101 IPR016085 Protease inhibitor, beta-barrel domain Y89_4101 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 Y89_4101 IPR022815 Protease inhibitor I38 Y89_4102 IPR006026 Peptidase, metallopeptidase Y89_4102 IPR011049 Serralysin-like metalloprotease, C-terminal Y89_4102 IPR013858 Peptidase M10 serralysin C-terminal domain Y89_4102 IPR016294 Peptidase M10B Y89_4102 IPR018511 Hemolysin-type calcium-binding conserved site Y89_4102 IPR024079 Metallopeptidase, catalytic domain Y89_4103 IPR003423 Outer membrane efflux protein Y89_4103 IPR010130 Type I secretion outer membrane protein, TolC Y89_4104 IPR003997 RTX secretion protein D, Gram-negative bacteria Y89_4104 IPR006143 RND efflux pump, membrane fusion protein Y89_4104 IPR006144 Secretion protein HlyD, conserved site Y89_4104 IPR010129 Type I secretion membrane fusion protein, HlyD Y89_4105 IPR003439 ABC transporter-like Y89_4105 IPR003593 AAA+ ATPase domain Y89_4105 IPR010128 ATPase, type I secretion system, PrtD Y89_4105 IPR011527 ABC transporter type 1, transmembrane domain Y89_4105 IPR017871 ABC transporter, conserved site Y89_4105 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4105 IPR036640 Y89_4105 Y89_4108 IPR000014 PAS domain Y89_4108 IPR001610 PAC motif Y89_4108 IPR001789 Signal transduction response regulator, receiver domain Y89_4108 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4108 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4108 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4108 IPR011006 CheY-like superfamily Y89_4108 IPR013656 PAS fold-4 Y89_4108 IPR029016 GAF domain-like Y89_4108 IPR035965 Y89_4108 Y89_4108 IPR036097 Y89_4108 Y89_4108 IPR036890 Y89_4108 Y89_4109 IPR000209 Peptidase S8/S53 domain Y89_4109 IPR015500 Peptidase S8, subtilisin-related Y89_4109 IPR016916 Uncharacterised conserved protein UCP029389, subtilisin-related Y89_4109 IPR023828 Peptidase S8, subtilisin, Ser-active site Y89_4109 IPR036852 Y89_4109 Y89_4110 IPR001647 DNA-binding HTH domain, TetR-type Y89_4110 IPR009057 Homeodomain-like Y89_4110 IPR036271 Y89_4110 Y89_4111 IPR001753 Crotonase superfamily Y89_4111 IPR029045 ClpP/crotonase-like domain Y89_4112 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 Y89_4112 IPR022742 Putative lysophospholipase Y89_4112 IPR029058 Alpha/Beta hydrolase fold Y89_4115 IPR003423 Outer membrane efflux protein Y89_4115 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_4116 IPR003997 RTX secretion protein D, Gram-negative bacteria Y89_4116 IPR039562 Y89_4116 Y89_4117 IPR004638 Drug resistance transporter EmrB/QacA subfamily Y89_4117 IPR011701 Major facilitator superfamily Y89_4117 IPR036259 Y89_4117 Y89_4118 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_4118 IPR009057 Homeodomain-like Y89_4118 IPR011051 RmlC-like cupin domain Y89_4118 IPR014710 RmlC-like jelly roll fold Y89_4118 IPR018060 DNA binding HTH domain, AraC-type Y89_4118 IPR018062 HTH domain AraC-type, conserved site Y89_4118 IPR020449 Transcription regulator HTH, AraC- type Y89_4119 IPR036249 Y89_4119 Y89_4120 IPR021245 Protein of unknown function DUF2790 Y89_4121 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein Y89_4122 IPR006143 RND efflux pump, membrane fusion protein Y89_4122 IPR032317 Y89_4122 Y89_4123 IPR012451 Protein of unknown function DUF1656 Y89_4124 IPR009057 Homeodomain-like Y89_4124 IPR011051 RmlC-like cupin domain Y89_4124 IPR014710 RmlC-like jelly roll fold Y89_4124 IPR018060 DNA binding HTH domain, AraC-type Y89_4124 IPR018062 HTH domain AraC-type, conserved site Y89_4126 IPR002575 Aminoglycoside phosphotransferase Y89_4126 IPR011009 Protein kinase-like domain Y89_4126 IPR016259 Hygromycin-B kinase Y89_4127 IPR001647 DNA-binding HTH domain, TetR-type Y89_4127 IPR009057 Homeodomain-like Y89_4128 IPR003680 Flavodoxin-like fold Y89_4128 IPR029039 Flavoprotein-like Y89_4129 IPR003680 Flavodoxin-like fold Y89_4129 IPR029039 Flavoprotein-like Y89_4130 IPR000847 Transcription regulator HTH, LysR Y89_4130 IPR005119 LysR, substrate-binding Y89_4130 IPR036388 Y89_4130 Y89_4130 IPR036390 Y89_4130 Y89_4131 IPR005300 Lytic transglycosylase MltA Y89_4131 IPR010611 3D domain Y89_4131 IPR026044 Membrane-bound lytic murein transglycosylase A Y89_4131 IPR036908 Y89_4131 Y89_4132 IPR000873 AMP-dependent synthetase/ligase Y89_4132 IPR009081 Acyl carrier protein-like Y89_4132 IPR020845 AMP-binding, conserved site Y89_4132 IPR036736 Y89_4132 Y89_4133 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_4134 IPR000073 Alpha/beta hydrolase fold-1 Y89_4134 IPR029058 Alpha/Beta hydrolase fold Y89_4135 IPR008775 Phytanoyl-CoA dioxygenase Y89_4136 IPR000891 Pyruvate carboxyltransferase Y89_4136 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Y89_4136 IPR011051 RmlC-like cupin domain Y89_4136 IPR013785 Aldolase-type TIM barrel Y89_4136 IPR014710 RmlC-like jelly roll fold Y89_4137 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4138 IPR000873 AMP-dependent synthetase/ligase Y89_4138 IPR020845 AMP-binding, conserved site Y89_4139 IPR001962 Asparagine synthase Y89_4139 IPR006426 Asparagine synthase, glutamine-hydrolyzing Y89_4139 IPR017932 Glutamine amidotransferase type 2 domain Y89_4139 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_4140 IPR003819 Taurine catabolism dioxygenase TauD/TfdA Y89_4141 IPR005829 Sugar transporter, conserved site Y89_4141 IPR011701 Major facilitator superfamily Y89_4141 IPR036259 Y89_4141 Y89_4142 IPR000073 Alpha/beta hydrolase fold-1 Y89_4142 IPR029058 Alpha/Beta hydrolase fold Y89_4143 IPR003829 Pirin, N-terminal domain Y89_4143 IPR011051 RmlC-like cupin domain Y89_4143 IPR012093 Pirin Y89_4143 IPR014710 RmlC-like jelly roll fold Y89_4144 IPR001763 Rhodanese-like domain Y89_4144 IPR032816 Y89_4144 Y89_4144 IPR036873 Y89_4144 Y89_4145 IPR020946 Flavin monooxygenase-like Y89_4145 IPR036188 Y89_4145 Y89_4146 IPR003148 Regulator of K+ conductance, N-terminal Y89_4146 IPR004771 K+/H+ exchanger Y89_4146 IPR006153 Cation/H+ exchanger Y89_4146 IPR036291 Y89_4146 Y89_4146 IPR038770 Y89_4146 Y89_4147 IPR015075 Protein of unknown function DUF1857 Y89_4147 IPR023393 START-like domain Y89_4148 IPR003829 Pirin, N-terminal domain Y89_4148 IPR008778 Pirin, C-terminal domain Y89_4148 IPR011051 RmlC-like cupin domain Y89_4148 IPR012093 Pirin Y89_4148 IPR014710 RmlC-like jelly roll fold Y89_4149 IPR005025 NADPH-dependent FMN reductase-like Y89_4149 IPR029039 Flavoprotein-like Y89_4150 IPR003718 OsmC/Ohr family Y89_4150 IPR015946 K homology domain-like, alpha/beta Y89_4150 IPR036102 Y89_4150 Y89_4151 IPR000868 Isochorismatase-like Y89_4151 IPR036380 Y89_4151 Y89_4152 IPR000847 Transcription regulator HTH, LysR Y89_4152 IPR005119 LysR, substrate-binding Y89_4152 IPR036388 Y89_4152 Y89_4152 IPR036390 Y89_4152 Y89_4153 IPR002935 O-methyltransferase, family 3 Y89_4153 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4154 IPR000064 Endopeptidase, NLPC/P60 domain Y89_4154 IPR038765 Y89_4154 Y89_4155 IPR000064 Endopeptidase, NLPC/P60 domain Y89_4155 IPR038765 Y89_4155 Y89_4156 IPR003000 Sirtuin family Y89_4156 IPR026591 Sirtuin family, catalytic core small domain Y89_4156 IPR029035 DHS-like NAD/FAD-binding domain Y89_4157 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_4157 IPR002197 DNA binding HTH domain, Fis-type Y89_4157 IPR003593 AAA+ ATPase domain Y89_4157 IPR009057 Homeodomain-like Y89_4157 IPR013656 PAS fold-4 Y89_4157 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_4157 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_4157 IPR025944 Sigma-54 interaction domain, conserved site Y89_4157 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4157 IPR035965 Y89_4157 Y89_4159 IPR002293 Amino acid/polyamine transporter I Y89_4159 IPR004754 Amino acid antiporter Y89_4160 IPR005019 Methyladenine glycosylase Y89_4160 IPR011257 DNA glycosylase Y89_4161 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase Y89_4161 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA Y89_4161 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_4161 IPR035107 Y89_4161 Y89_4162 IPR001623 DnaJ domain Y89_4162 IPR021059 DnaJ-related protein, N-terminal Y89_4162 IPR036869 Y89_4162 Y89_4163 IPR009698 Protein of unknown function DUF1282 Y89_4164 IPR006640 Domain of unknown function SprT-like Y89_4164 IPR023483 Uncharacterised protein family SprT Y89_4164 IPR035240 Y89_4164 Y89_4165 IPR003673 CoA-transferase family III Y89_4165 IPR023606 CoA-transferase family III domain Y89_4166 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_4166 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_4166 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_4166 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_4166 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_4166 IPR036250 Y89_4166 Y89_4166 IPR037069 Y89_4166 Y89_4167 IPR011251 Luciferase-like domain Y89_4167 IPR020020 Luciferase-type oxidoreductase Y89_4167 IPR036661 Y89_4167 Y89_4168 IPR004045 Glutathione S-transferase, N-terminal Y89_4168 IPR004046 Glutathione S-transferase, C-terminal Y89_4168 IPR036249 Y89_4168 Y89_4168 IPR036282 Y89_4168 Y89_4169 IPR000847 Transcription regulator HTH, LysR Y89_4169 IPR005119 LysR, substrate-binding Y89_4169 IPR036388 Y89_4169 Y89_4169 IPR036390 Y89_4169 Y89_4170 IPR001991 Sodium:dicarboxylate symporter Y89_4170 IPR018107 Sodium:dicarboxylate symporter, conserved site Y89_4170 IPR023954 C4-dicarboxylate transport protein Y89_4170 IPR036458 Y89_4170 Y89_4171 IPR009057 Homeodomain-like Y89_4171 IPR018060 DNA binding HTH domain, AraC-type Y89_4171 IPR020449 Transcription regulator HTH, AraC- type Y89_4171 IPR032687 Y89_4171 Y89_4172 IPR000014 PAS domain Y89_4172 IPR000160 GGDEF domain Y89_4172 IPR001610 PAC motif Y89_4172 IPR001633 EAL domain Y89_4172 IPR007895 MASE1 Y89_4172 IPR013655 PAS fold-3 Y89_4172 IPR013656 PAS fold-4 Y89_4172 IPR029787 Nucleotide cyclase Y89_4172 IPR035919 Y89_4172 Y89_4172 IPR035965 Y89_4172 Y89_4173 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4173 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4173 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4173 IPR036097 Y89_4173 Y89_4173 IPR036890 Y89_4173 Y89_4174 IPR001789 Signal transduction response regulator, receiver domain Y89_4174 IPR001867 Signal transduction response regulator, C-terminal Y89_4174 IPR011006 CheY-like superfamily Y89_4174 IPR036388 Y89_4174 Y89_4175 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel Y89_4175 IPR017690 Outer membrane insertion C-terminal signal, omp85 target Y89_4175 IPR027385 Outer membrane protein beta-barrel Y89_4176 IPR004448 Nitrate reductas, NapE, periplasmic Y89_4176 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE Y89_4177 IPR004496 Ferredoxin-type protein NapF Y89_4177 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_4177 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_4178 IPR005623 Chaperone NapD, nitrate reductase assembly Y89_4179 IPR006656 Molybdopterin oxidoreductase Y89_4179 IPR006657 Molydopterin dinucleotide-binding domain Y89_4179 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Y89_4179 IPR009010 Aspartate decarboxylase-like domain Y89_4179 IPR010051 Periplasmic nitrate reductase, large subunit Y89_4179 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site Y89_4180 IPR005591 Nitrate reductase cytochrome c-type subunit NapB Y89_4180 IPR036280 Y89_4180 Y89_4181 IPR005126 NapC/NirT cytochrome c, N-terminal Y89_4181 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT Y89_4181 IPR024717 Denitrification system component NapC/NirT/NrfH Y89_4181 IPR036280 Y89_4181 Y89_4181 IPR038266 Y89_4181 Y89_4182 IPR002477 Peptidoglycan binding-like Y89_4182 IPR011970 Lytic murein transglycosylase Y89_4182 IPR023346 Lysozyme-like domain Y89_4182 IPR031304 Y89_4182 Y89_4182 IPR036365 Y89_4182 Y89_4182 IPR036366 Y89_4182 Y89_4183 IPR005496 Integral membrane protein TerC Y89_4183 IPR022301 Integral membrane protein YjbE Y89_4184 IPR013819 Lipoxygenase, C-terminal Y89_4184 IPR020833 Lipoxygenase, iron binding site Y89_4184 IPR020834 Lipoxygenase, conserved site Y89_4184 IPR036226 Y89_4184 Y89_4186 IPR013320 Concanavalin A-like lectin/glucanase, subgroup Y89_4186 IPR014895 Alginate lyase 2 Y89_4187 IPR002925 Dienelactone hydrolase Y89_4187 IPR029058 Alpha/Beta hydrolase fold Y89_4188 IPR003542 Enterobactin synthetase-like, component D Y89_4188 IPR008278 4'-phosphopantetheinyl transferase superfamily Y89_4188 IPR037143 Y89_4188 Y89_4189 IPR000594 UBA/THIF-type NAD/FAD binding fold Y89_4189 IPR035985 Y89_4189 Y89_4190 IPR000490 Glycoside hydrolase, family 17 Y89_4190 IPR017853 Glycoside hydrolase, superfamily Y89_4190 IPR029044 Nucleotide-diphospho-sugar transferases Y89_4191 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site Y89_4191 IPR002933 Peptidase M20 Y89_4191 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria Y89_4191 IPR011650 Peptidase M20, dimerisation domain Y89_4191 IPR036264 Y89_4191 Y89_4192 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted Y89_4192 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4194 IPR002059 Cold-shock protein, DNA-binding Y89_4194 IPR011129 Cold shock protein Y89_4194 IPR012156 Cold shock, CspA Y89_4194 IPR012340 Nucleic acid-binding, OB-fold Y89_4194 IPR019844 Cold-shock conserved site Y89_4195 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4195 IPR003660 HAMP linker domain Y89_4195 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4195 IPR036097 Y89_4195 Y89_4195 IPR036890 Y89_4195 Y89_4196 IPR001789 Signal transduction response regulator, receiver domain Y89_4196 IPR001867 Signal transduction response regulator, C-terminal Y89_4196 IPR011006 CheY-like superfamily Y89_4196 IPR016032 Signal transduction response regulator, C-terminal effector Y89_4196 IPR036388 Y89_4196 Y89_4197 IPR000788 Ribonucleotide reductase large subunit, C-terminal Y89_4197 IPR005144 ATP-cone Y89_4197 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal Y89_4197 IPR013346 Ribonucleotide reductase, class I , alpha subunit Y89_4197 IPR013509 Ribonucleotide reductase large subunit, N-terminal Y89_4198 IPR000358 Ribonucleotide reductase small subunit Y89_4198 IPR009078 Ferritin-like superfamily Y89_4198 IPR012348 Ribonucleotide reductase-related Y89_4199 IPR002686 Transposase IS200-like Y89_4199 IPR036515 Y89_4199 Y89_4200 IPR003497 BRO N-terminal domain Y89_4201 IPR000290 Colicin immunity protein/pyocin immunity protein Y89_4201 IPR035900 Y89_4201 Y89_4202 IPR003060 Pyocin S killer protein Y89_4202 IPR003615 HNH nuclease Y89_4202 IPR016128 Pyosin/cloacin translocation domain Y89_4202 IPR036302 Y89_4202 Y89_4202 IPR037146 Y89_4202 Y89_4203 IPR018696 Protein of unknown function DUF2195 Y89_4204 IPR013320 Concanavalin A-like lectin/glucanase, subgroup Y89_4204 IPR015099 Exotoxin A catalytic domain Y89_4204 IPR015185 Exotoxin A, binding Y89_4204 IPR015186 Exotoxin A, middle domain Y89_4204 IPR036478 Y89_4204 Y89_4205 IPR002293 Amino acid/polyamine transporter I Y89_4206 IPR001670 Alcohol dehydrogenase, iron-type Y89_4206 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Y89_4207 IPR000847 Transcription regulator HTH, LysR Y89_4207 IPR005119 LysR, substrate-binding Y89_4207 IPR036388 Y89_4207 Y89_4207 IPR036390 Y89_4207 Y89_4208 IPR000849 Sugar phosphate transporter Y89_4208 IPR011701 Major facilitator superfamily Y89_4208 IPR036259 Y89_4208 Y89_4209 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial Y89_4209 IPR023214 HAD-like domain Y89_4209 IPR036412 Y89_4209 Y89_4210 IPR000524 Transcription regulator HTH, GntR Y89_4210 IPR011663 UbiC transcription regulator-associated Y89_4210 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Y89_4210 IPR036388 Y89_4210 Y89_4210 IPR036390 Y89_4210 Y89_4211 IPR000847 Transcription regulator HTH, LysR Y89_4211 IPR005119 LysR, substrate-binding Y89_4211 IPR036388 Y89_4211 Y89_4211 IPR036390 Y89_4211 Y89_4212 IPR011051 RmlC-like cupin domain Y89_4212 IPR013096 Cupin 2, conserved barrel Y89_4212 IPR014710 RmlC-like jelly roll fold Y89_4212 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein Y89_4213 IPR014044 CAP domain Y89_4213 IPR035940 Y89_4213 Y89_4214 IPR000847 Transcription regulator HTH, LysR Y89_4214 IPR005119 LysR, substrate-binding Y89_4214 IPR036388 Y89_4214 Y89_4214 IPR036390 Y89_4214 Y89_4215 IPR011032 GroES (chaperonin 10)-like Y89_4215 IPR013154 Alcohol dehydrogenase GroES-like Y89_4215 IPR014189 Quinone oxidoreductase PIG3 Y89_4215 IPR020843 Polyketide synthase, enoylreductase Y89_4215 IPR036291 Y89_4215 Y89_4216 IPR000792 Transcription regulator LuxR, C-terminal Y89_4216 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Y89_4216 IPR016032 Signal transduction response regulator, C-terminal effector Y89_4216 IPR019941 Transcription regulator LuxR, chaperone HchA-associated Y89_4216 IPR036388 Y89_4216 Y89_4216 IPR036693 Y89_4216 Y89_4217 IPR002818 ThiJ/PfpI Y89_4217 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 Y89_4217 IPR029062 Class I glutamine amidotransferase-like Y89_4218 IPR007263 Protein of unknown function DUF393 Y89_4221 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG Y89_4221 IPR011701 Major facilitator superfamily Y89_4221 IPR036259 Y89_4221 Y89_4222 IPR001173 Glycosyltransferase 2-like Y89_4222 IPR006446 Rhamnosyltransferase Y89_4222 IPR029044 Nucleotide-diphospho-sugar transferases Y89_4223 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_4223 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_4224 IPR000847 Transcription regulator HTH, LysR Y89_4224 IPR005119 LysR, substrate-binding Y89_4224 IPR036388 Y89_4224 Y89_4224 IPR036390 Y89_4224 Y89_4225 IPR020471 Aldo/keto reductase subgroup Y89_4225 IPR023210 NADP-dependent oxidoreductase domain Y89_4225 IPR036812 Y89_4225 Y89_4227 IPR003000 Sirtuin family Y89_4227 IPR026591 Sirtuin family, catalytic core small domain Y89_4227 IPR027546 Sirtuin, class III Y89_4227 IPR029035 DHS-like NAD/FAD-binding domain Y89_4228 IPR003607 HD/PDEase domain Y89_4228 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase Y89_4228 IPR006674 HD domain Y89_4228 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria Y89_4228 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain Y89_4229 IPR023117 PA1123-like domain Y89_4229 IPR036808 Y89_4229 Y89_4230 IPR023635 Peptide deformylase Y89_4230 IPR036821 Y89_4230 Y89_4231 IPR025293 Protein of unknown function DUF4154 Y89_4232 IPR000160 GGDEF domain Y89_4232 IPR003660 HAMP linker domain Y89_4232 IPR029787 Nucleotide cyclase Y89_4232 IPR033417 Y89_4232 Y89_4233 IPR006664 Outer membrane protein, bacterial Y89_4233 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_4233 IPR036737 Y89_4233 Y89_4236 IPR014464 Conserved virulence factor B Y89_4236 IPR022967 RNA-binding domain, S1 Y89_4236 IPR036388 Y89_4236 Y89_4236 IPR039566 Y89_4236 Y89_4237 IPR000917 Sulfatase Y89_4237 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_4237 IPR017850 Alkaline-phosphatase-like, core domain Y89_4239 IPR003439 ABC transporter-like Y89_4239 IPR003593 AAA+ ATPase domain Y89_4239 IPR011527 ABC transporter type 1, transmembrane domain Y89_4239 IPR011918 ABC transporter, ATP-binding/permease protein Y89_4239 IPR017871 ABC transporter, conserved site Y89_4239 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4239 IPR036640 Y89_4239 Y89_4241 IPR018668 Protein of unknown function DUF2132 Y89_4241 IPR036361 Y89_4241 Y89_4242 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase Y89_4242 IPR011042 Six-bladed beta-propeller, TolB-like Y89_4242 IPR012938 Glucose/Sorbosone dehydrogenase Y89_4244 IPR002942 RNA-binding S4 domain Y89_4244 IPR020103 Pseudouridine synthase, catalytic domain Y89_4244 IPR036986 Y89_4244 Y89_4245 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_4245 IPR009057 Homeodomain-like Y89_4245 IPR011051 RmlC-like cupin domain Y89_4245 IPR014710 RmlC-like jelly roll fold Y89_4245 IPR018060 DNA binding HTH domain, AraC-type Y89_4245 IPR018062 HTH domain AraC-type, conserved site Y89_4246 IPR011701 Major facilitator superfamily Y89_4246 IPR036259 Y89_4246 Y89_4247 IPR000160 GGDEF domain Y89_4247 IPR029787 Nucleotide cyclase Y89_4248 IPR010239 Conserved hypothetical protein CHP02001 Y89_4249 IPR012823 Flagellar export FliJ Y89_4249 IPR018006 Flagellar FliJ, proteobacteria Y89_4250 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Y89_4250 IPR003593 AAA+ ATPase domain Y89_4250 IPR005714 ATPase, type III secretion system, FliI/YscN Y89_4250 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Y89_4250 IPR020005 Flagellar export ATPase FliI, clade 1 Y89_4250 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4251 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Y89_4252 IPR000090 Flagellar motor switch protein FliG Y89_4252 IPR011002 Flagellar motor switch protein FliG, alpha-helical Y89_4252 IPR023087 Y89_4252 Y89_4252 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Y89_4252 IPR032779 Y89_4252 Y89_4253 IPR000067 Flagellar M-ring protein FliF Y89_4253 IPR006182 Secretory protein YscJ/FliF Y89_4253 IPR013556 Flagellar M-ring C-terminal Y89_4254 IPR001624 Flagellar hook-basal body complex protein FliE Y89_4255 IPR001789 Signal transduction response regulator, receiver domain Y89_4255 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_4255 IPR002197 DNA binding HTH domain, Fis-type Y89_4255 IPR003593 AAA+ ATPase domain Y89_4255 IPR009057 Homeodomain-like Y89_4255 IPR011006 CheY-like superfamily Y89_4255 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_4255 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_4255 IPR025944 Sigma-54 interaction domain, conserved site Y89_4255 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4256 IPR000014 PAS domain Y89_4256 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4256 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4256 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4256 IPR035965 Y89_4256 Y89_4256 IPR036097 Y89_4256 Y89_4256 IPR036890 Y89_4256 Y89_4257 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_4257 IPR002197 DNA binding HTH domain, Fis-type Y89_4257 IPR003593 AAA+ ATPase domain Y89_4257 IPR009057 Homeodomain-like Y89_4257 IPR010518 Flagellar regulatory FleQ Y89_4257 IPR011006 CheY-like superfamily Y89_4257 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_4257 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_4257 IPR025944 Sigma-54 interaction domain, conserved site Y89_4257 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4258 IPR008622 Flagellar protein FliT Y89_4259 IPR003713 Flagellar protein FliS Y89_4259 IPR036584 Y89_4259 Y89_4260 IPR003481 Flagellar hook-associated protein 2, N-terminal Y89_4260 IPR010809 Flagellar hook-associated 2, C-terminal Y89_4260 IPR010810 Flagellin hook, IN motif Y89_4261 IPR005186 Flagellar protein FlaG protein Y89_4261 IPR035924 Y89_4261 Y89_4262 IPR001029 Flagellin, D0/D1 domain Y89_4262 IPR001492 Flagellin Y89_4262 IPR010810 Flagellin hook, IN motif Y89_4263 IPR001173 Glycosyltransferase 2-like Y89_4263 IPR007554 CDP-glycerol glycerophosphotransferase Y89_4263 IPR029044 Nucleotide-diphospho-sugar transferases Y89_4264 IPR025877 MobA-like NTP transferase domain Y89_4264 IPR029044 Nucleotide-diphospho-sugar transferases Y89_4265 IPR023214 HAD-like domain Y89_4265 IPR036412 Y89_4265 Y89_4266 IPR025714 Methyltransferase domain Y89_4266 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4267 IPR001029 Flagellin, D0/D1 domain Y89_4267 IPR013384 Flagellar hook-associated protein 3 Y89_4268 IPR002371 Flagellar hook-associated protein, FlgK Y89_4268 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y89_4269 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain Y89_4269 IPR013377 Flagellar rod assembly protein/muramidase FlgJ Y89_4269 IPR019301 Flagellar protein FlgJ, N-terminal Y89_4269 IPR023346 Lysozyme-like domain Y89_4270 IPR001782 Flagellar P-ring protein Y89_4271 IPR000527 Flagellar L-ring protein Y89_4272 IPR001444 Flagellar basal body rod protein, N-terminal Y89_4272 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y89_4272 IPR012834 Flagellar basal-body rod FlgG Y89_4272 IPR019776 Flagellar basal body rod protein, conserved site Y89_4272 IPR020013 Fagellar hook-basal body protein, FlgE/F/G Y89_4272 IPR037925 Y89_4272 Y89_4273 IPR001444 Flagellar basal body rod protein, N-terminal Y89_4273 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y89_4273 IPR012836 Flagellar basal-body rod FlgF Y89_4273 IPR020013 Fagellar hook-basal body protein, FlgE/F/G Y89_4273 IPR037925 Y89_4273 Y89_4274 IPR001444 Flagellar basal body rod protein, N-terminal Y89_4274 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y89_4274 IPR011491 Flagellar basal body FlaE Y89_4274 IPR020013 Fagellar hook-basal body protein, FlgE/F/G Y89_4274 IPR037058 Y89_4274 Y89_4274 IPR037925 Y89_4274 Y89_4275 IPR005648 Flagellar hook capping protein Y89_4275 IPR025963 FlgD Tudor-like domain Y89_4275 IPR025965 FlgD Ig-like domain Y89_4276 IPR001444 Flagellar basal body rod protein, N-terminal Y89_4276 IPR006299 Flagellar basal-body rod protein FlgC Y89_4276 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Y89_4276 IPR019776 Flagellar basal body rod protein, conserved site Y89_4277 IPR001444 Flagellar basal body rod protein, N-terminal Y89_4277 IPR006300 Flagellar basal-body rod protein FlgB Y89_4277 IPR019776 Flagellar basal body rod protein, conserved site Y89_4278 IPR032024 Y89_4278 Y89_4279 IPR018741 Protein of unknown function DUF2288 Y89_4280 IPR000709 Leu/Ile/Val-binding protein Y89_4280 IPR028081 Leucine-binding protein domain Y89_4280 IPR028082 Periplasmic binding protein-like I Y89_4281 IPR001851 ABC transporter, permease Y89_4282 IPR001851 ABC transporter, permease Y89_4282 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal Y89_4283 IPR003439 ABC transporter-like Y89_4283 IPR003593 AAA+ ATPase domain Y89_4283 IPR017871 ABC transporter, conserved site Y89_4283 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4283 IPR032823 Y89_4283 Y89_4284 IPR003439 ABC transporter-like Y89_4284 IPR003593 AAA+ ATPase domain Y89_4284 IPR017871 ABC transporter, conserved site Y89_4284 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4284 IPR030660 Y89_4284 Y89_4285 IPR011990 Tetratricopeptide-like helical domain Y89_4286 IPR001404 Heat shock protein Hsp90 family Y89_4286 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_4286 IPR020575 Heat shock protein Hsp90, N-terminal Y89_4286 IPR036890 Y89_4286 Y89_4287 IPR000847 Transcription regulator HTH, LysR Y89_4287 IPR005119 LysR, substrate-binding Y89_4287 IPR036388 Y89_4287 Y89_4287 IPR036390 Y89_4287 Y89_4288 IPR002347 Glucose/ribitol dehydrogenase Y89_4288 IPR036291 Y89_4288 Y89_4289 IPR007438 Protein of unknown function DUF488 Y89_4292 IPR000182 GNAT domain Y89_4292 IPR016181 Acyl-CoA N-acyltransferase Y89_4293 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_4293 IPR036052 Y89_4293 Y89_4294 IPR000620 Drug/metabolite transporter Y89_4295 IPR005133 Na+/H+ antiporter subunit G Y89_4296 IPR007208 Na(+)/H(+) antiporter subunit F-like Y89_4297 IPR002758 Na+/H+ antiporter subunit E Y89_4298 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Y89_4298 IPR003918 NADH:ubiquinone oxidoreductase Y89_4299 IPR039428 Y89_4299 Y89_4300 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal Y89_4300 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Y89_4300 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Y89_4300 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup Y89_4300 IPR025383 Domain of unknown function DUF4040 Y89_4301 IPR008816 Glycine zipper 2TM domain Y89_4303 IPR004381 Glycerate kinase Y89_4303 IPR018193 Glycerate kinase, flavodoxin-like domain Y89_4303 IPR018197 Glycerate kinase, restriction-enzyme-like fold Y89_4303 IPR036129 Y89_4303 Y89_4304 IPR003474 Gluconate transporter Y89_4305 IPR008599 Putative sugar diacid recognition Y89_4305 IPR025736 PucR C-terminal helix-turn-helix domain Y89_4306 IPR000659 Pyridoxamine 5'-phosphate oxidase Y89_4306 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain Y89_4306 IPR012349 FMN-binding split barrel Y89_4306 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal Y89_4306 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site Y89_4307 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_4307 IPR036737 Y89_4307 Y89_4308 IPR001466 Beta-lactamase-related Y89_4308 IPR012338 Beta-lactamase/transpeptidase-like Y89_4309 IPR017853 Glycoside hydrolase, superfamily Y89_4310 IPR006555 ATP-dependent helicase, C-terminal Y89_4310 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4310 IPR039000 Y89_4310 Y89_4311 IPR008457 Copper resistance D Y89_4313 IPR009525 Protein of unknown function DUF1145 Y89_4314 IPR006664 Outer membrane protein, bacterial Y89_4314 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_4314 IPR036737 Y89_4314 Y89_4316 IPR004027 SEC-C motif Y89_4316 IPR023006 Uncharacterised protein family UPF0225 Y89_4316 IPR032710 Y89_4316 Y89_4318 IPR005115 Uncharacterised domain UPF0126 Y89_4320 IPR004864 Late embryogenesis abundant protein, LEA-14 Y89_4320 IPR013990 Water stress and hypersensitive response domain Y89_4322 IPR004045 Glutathione S-transferase, N-terminal Y89_4322 IPR004046 Glutathione S-transferase, C-terminal Y89_4322 IPR036249 Y89_4322 Y89_4322 IPR036282 Y89_4322 Y89_4323 IPR002692 Penicillin amidase-like Y89_4323 IPR014395 Penicillin/cephalosporin acylase Y89_4323 IPR023343 Penicillin amidase type, domain1 Y89_4323 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_4324 IPR003798 DNA recombination RmuC Y89_4325 IPR014914 RES Y89_4326 IPR001387 Cro/C1-type helix-turn-helix domain Y89_4326 IPR010982 Lambda repressor-like, DNA-binding domain Y89_4326 IPR024467 Domain of unknown function DUF2384 Y89_4327 IPR006076 FAD dependent oxidoreductase Y89_4327 IPR036188 Y89_4327 Y89_4328 IPR015590 Aldehyde dehydrogenase domain Y89_4328 IPR016161 Aldehyde/histidinol dehydrogenase Y89_4328 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_4328 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_4328 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_4330 IPR005318 Outer membrane porin, bacterial Y89_4330 IPR023614 Porin domain Y89_4331 IPR004136 2-nitropropane dioxygenase, NPD Y89_4331 IPR013785 Aldolase-type TIM barrel Y89_4332 IPR002347 Glucose/ribitol dehydrogenase Y89_4332 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_4332 IPR036291 Y89_4332 Y89_4333 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_4333 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_4333 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_4333 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_4333 IPR036250 Y89_4333 Y89_4333 IPR037069 Y89_4333 Y89_4334 IPR001753 Crotonase superfamily Y89_4334 IPR014748 Crontonase, C-terminal Y89_4334 IPR029045 ClpP/crotonase-like domain Y89_4335 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_4335 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_4335 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_4335 IPR036250 Y89_4335 Y89_4335 IPR037069 Y89_4335 Y89_4336 IPR003736 Phenylacetic acid degradation-related domain Y89_4336 IPR006683 Thioesterase superfamily Y89_4336 IPR029069 HotDog domain Y89_4337 IPR005829 Sugar transporter, conserved site Y89_4337 IPR011701 Major facilitator superfamily Y89_4337 IPR036259 Y89_4337 Y89_4338 IPR002539 MaoC-like domain Y89_4338 IPR029069 HotDog domain Y89_4338 IPR039569 Y89_4338 Y89_4339 IPR003781 CoA-binding Y89_4339 IPR013815 ATP-grasp fold, subdomain 1 Y89_4339 IPR016102 Succinyl-CoA synthetase-like Y89_4339 IPR032875 Y89_4339 Y89_4339 IPR036291 Y89_4339 Y89_4340 IPR002155 Thiolase Y89_4340 IPR016039 Thiolase-like Y89_4340 IPR020617 Thiolase, C-terminal Y89_4341 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal Y89_4341 IPR012340 Nucleic acid-binding, OB-fold Y89_4341 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal Y89_4342 IPR005471 Transcription regulator IclR, N-terminal Y89_4342 IPR014757 Transcription regulator IclR, C-terminal Y89_4342 IPR029016 GAF domain-like Y89_4342 IPR036388 Y89_4342 Y89_4342 IPR036390 Y89_4342 Y89_4343 IPR001173 Glycosyltransferase 2-like Y89_4343 IPR029044 Nucleotide-diphospho-sugar transferases Y89_4344 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase Y89_4344 IPR018236 SAICAR synthetase, conserved site Y89_4344 IPR028923 SAICAR synthetase/ADE2, N-terminal Y89_4345 IPR001279 Beta-lactamase-like Y89_4345 IPR036866 Y89_4345 Y89_4346 IPR010653 Lipoprotein, NlpB Y89_4347 IPR002220 DapA-like Y89_4347 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA Y89_4347 IPR013785 Aldolase-type TIM barrel Y89_4347 IPR020624 Dihydrodipicolinate synthetase, conserved site Y89_4347 IPR020625 Dihydrodipicolinate synthetase, active site Y89_4348 IPR016867 Glycine cleavage repressor GcvR Y89_4349 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Y89_4349 IPR024706 Peroxiredoxin, AhpC-type Y89_4349 IPR036249 Y89_4349 Y89_4350 IPR002549 Uncharacterised protein family UPF0118 Y89_4351 IPR001455 TusA-like domain Y89_4351 IPR036868 Y89_4351 Y89_4352 IPR001915 Peptidase M48 Y89_4352 IPR011990 Tetratricopeptide-like helical domain Y89_4352 IPR030873 Y89_4352 Y89_4353 IPR003473 Quinolinate synthetase A Y89_4353 IPR023513 Quinolinate synthase A, type 1 Y89_4353 IPR036094 Y89_4353 Y89_4354 IPR000847 Transcription regulator HTH, LysR Y89_4354 IPR005119 LysR, substrate-binding Y89_4354 IPR036388 Y89_4354 Y89_4354 IPR036390 Y89_4354 Y89_4355 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain Y89_4355 IPR017926 Glutamine amidotransferase Y89_4355 IPR029062 Class I glutamine amidotransferase-like Y89_4356 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial Y89_4356 IPR005801 ADC synthase Y89_4356 IPR006805 Anthranilate synthase component I, N-terminal Y89_4356 IPR015890 Chorismate binding, C-terminal Y89_4356 IPR019999 Anthranilate synthase component I - like Y89_4357 IPR001279 Beta-lactamase-like Y89_4357 IPR036866 Y89_4357 Y89_4358 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal Y89_4358 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Y89_4358 IPR016039 Thiolase-like Y89_4359 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal Y89_4359 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Y89_4359 IPR016039 Thiolase-like Y89_4360 IPR016039 Thiolase-like Y89_4361 IPR000873 AMP-dependent synthetase/ligase Y89_4361 IPR020845 AMP-binding, conserved site Y89_4361 IPR025110 AMP-binding enzyme C-terminal domain Y89_4362 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain Y89_4362 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding Y89_4362 IPR023546 Methylated-DNA--protein-cysteine methyltransferase Y89_4362 IPR036217 Y89_4362 Y89_4362 IPR036388 Y89_4362 Y89_4362 IPR036631 Y89_4362 Y89_4363 IPR000015 Outer membrane usher protein Y89_4363 IPR018030 Fimbrial membrane usher, conserved site Y89_4363 IPR025885 PapC, N-terminal domain Y89_4363 IPR025949 PapC-like, C-terminal domain Y89_4363 IPR037224 Y89_4363 Y89_4364 IPR001829 Pili assembly chaperone, bacterial Y89_4364 IPR008962 PapD-like Y89_4364 IPR013783 Immunoglobulin-like fold Y89_4364 IPR016147 PapD, N-terminal, bacterial Y89_4364 IPR016148 Pili assembly chaperone, C-terminal domain Y89_4364 IPR036316 Y89_4364 Y89_4365 IPR000259 Fimbrial-type adhesion domain Y89_4365 IPR008966 Adhesion domain Y89_4365 IPR036937 Y89_4365 Y89_4369 IPR006683 Thioesterase superfamily Y89_4369 IPR029069 HotDog domain Y89_4370 IPR001584 Integrase, catalytic core Y89_4370 IPR012337 Ribonuclease H-like domain Y89_4370 IPR025948 HTH-like domain Y89_4370 IPR036397 Y89_4370 Y89_4371 IPR002514 Transposase IS3/IS911family Y89_4371 IPR009057 Homeodomain-like Y89_4372 IPR000293 Channel forming colicin, C-terminal cytotoxic Y89_4372 IPR038283 Y89_4372 Y89_4373 IPR002514 Transposase IS3/IS911family Y89_4373 IPR009057 Homeodomain-like Y89_4374 IPR012336 Thioredoxin-like fold Y89_4374 IPR036249 Y89_4374 Y89_4377 IPR002514 Transposase IS3/IS911family Y89_4377 IPR009057 Homeodomain-like Y89_4378 IPR001584 Integrase, catalytic core Y89_4378 IPR012337 Ribonuclease H-like domain Y89_4378 IPR025948 HTH-like domain Y89_4378 IPR036397 Y89_4378 Y89_4379 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_4379 IPR018317 Queuosine biosynthesis protein QueC Y89_4380 IPR007197 Radical SAM Y89_4380 IPR013785 Aldolase-type TIM barrel Y89_4380 IPR024924 7-carboxy-7-deazaguanine synthase-like Y89_4380 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE Y89_4381 IPR011990 Tetratricopeptide-like helical domain Y89_4381 IPR014162 Tol-Pal system, YbgF Y89_4381 IPR032519 Y89_4381 Y89_4381 IPR034706 Y89_4381 Y89_4381 IPR039565 Y89_4381 Y89_4382 IPR006664 Outer membrane protein, bacterial Y89_4382 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_4382 IPR006690 Outer membrane protein, OmpA-like, conserved site Y89_4382 IPR014169 Peptidoglycan-associated lipoprotein Y89_4382 IPR036737 Y89_4382 Y89_4382 IPR039001 Y89_4382 Y89_4383 IPR007195 TolB, N-terminal Y89_4383 IPR011042 Six-bladed beta-propeller, TolB-like Y89_4383 IPR011659 WD40-like Beta Propeller Y89_4383 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB Y89_4383 IPR036752 Y89_4383 Y89_4384 IPR006260 TonB, C-terminal Y89_4384 IPR014161 Tol-Pal system, TolA Y89_4385 IPR003400 Biopolymer transport protein ExbD/TolR Y89_4385 IPR014168 Biopolymer transport, TolR Y89_4386 IPR002898 MotA/TolQ/ExbB proton channel Y89_4386 IPR014163 Tol-Pal system, TolQ Y89_4387 IPR006683 Thioesterase superfamily Y89_4387 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family Y89_4387 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase Y89_4387 IPR029069 HotDog domain Y89_4388 IPR003593 AAA+ ATPase domain Y89_4388 IPR004605 DNA helicase, Holliday junction RuvB type Y89_4388 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal Y89_4388 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal Y89_4388 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4388 IPR036388 Y89_4388 Y89_4388 IPR036390 Y89_4388 Y89_4389 IPR000085 Bacterial DNA recombination protein RuvA Y89_4389 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Y89_4389 IPR010994 RuvA domain 2-like Y89_4389 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal Y89_4389 IPR012340 Nucleic acid-binding, OB-fold Y89_4389 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial Y89_4389 IPR036267 Y89_4389 Y89_4390 IPR002176 Crossover junction endodeoxyribonuclease RuvC Y89_4390 IPR012337 Ribonuclease H-like domain Y89_4390 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site Y89_4390 IPR036397 Y89_4390 Y89_4391 IPR002876 Transcriptional regulator TACO1-like Y89_4391 IPR017856 Integrase, N-terminal zinc-binding domain-like Y89_4391 IPR026564 Transcriptional regulator TACO1-like, domain 3 Y89_4391 IPR029072 YebC-like Y89_4392 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb Y89_4392 IPR004115 GAD-like domain Y89_4392 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Y89_4392 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Y89_4392 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type Y89_4392 IPR012340 Nucleic acid-binding, OB-fold Y89_4392 IPR029351 GAD domain Y89_4393 IPR002177 DNA-binding protein Dps Y89_4393 IPR008331 Ferritin/DPS protein domain Y89_4393 IPR009078 Ferritin-like superfamily Y89_4393 IPR012347 Ferritin-related Y89_4393 IPR023188 DNA-binding protein Dps, conserved site Y89_4394 IPR002059 Cold-shock protein, DNA-binding Y89_4394 IPR011129 Cold shock protein Y89_4394 IPR012340 Nucleic acid-binding, OB-fold Y89_4394 IPR019844 Cold-shock conserved site Y89_4395 IPR007236 SlyX Y89_4396 IPR001310 Histidine triad (HIT) protein Y89_4396 IPR026026 Histidine triad hydrolase, Hint-type Y89_4396 IPR036265 Y89_4396 Y89_4399 IPR003736 Phenylacetic acid degradation-related domain Y89_4399 IPR006683 Thioesterase superfamily Y89_4399 IPR029069 HotDog domain Y89_4400 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain Y89_4400 IPR002316 Proline-tRNA ligase, class IIa Y89_4400 IPR004154 Anticodon-binding Y89_4400 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type Y89_4400 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Y89_4400 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 Y89_4400 IPR036621 Y89_4400 Y89_4400 IPR036754 Y89_4400 Y89_4402 IPR001792 Acylphosphatase-like domain Y89_4402 IPR017968 Acylphosphatase, conserved site Y89_4402 IPR036046 Y89_4402 Y89_4403 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Y89_4403 IPR017937 Thioredoxin, conserved site Y89_4403 IPR036249 Y89_4403 Y89_4406 IPR017039 Virulence factor BrkB Y89_4406 IPR023679 Uncharacterised protein family UPF0761, bacterial Y89_4407 IPR006659 Arsenate reductase Y89_4407 IPR006660 Arsenate reductase-like Y89_4407 IPR036249 Y89_4407 Y89_4408 IPR001226 Flavodoxin, conserved site Y89_4408 IPR005025 NADPH-dependent FMN reductase-like Y89_4408 IPR010089 Flavoprotein WrbA Y89_4408 IPR029039 Flavoprotein-like Y89_4409 IPR018643 Protein of unknown function DUF2069, membrane Y89_4411 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) Y89_4411 IPR017788 DnaA regulatory inactivator Hda Y89_4411 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4412 IPR018642 Protein of unknown function DUF2066 Y89_4413 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase Y89_4413 IPR010918 AIR synthase-related protein, C-terminal domain Y89_4413 IPR016188 PurM, N-terminal-like Y89_4413 IPR036676 Y89_4413 Y89_4413 IPR036921 Y89_4413 Y89_4414 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Y89_4414 IPR002376 Formyl transferase, N-terminal Y89_4414 IPR004607 Phosphoribosylglycinamide formyltransferase Y89_4414 IPR036477 Y89_4414 Y89_4415 IPR021457 Protein of unknown function DUF3108 Y89_4416 IPR000835 MarR-type HTH domain Y89_4416 IPR023187 Transcriptional regulator MarR-type, conserved site Y89_4416 IPR036388 Y89_4416 Y89_4416 IPR036390 Y89_4416 Y89_4417 IPR012336 Thioredoxin-like fold Y89_4417 IPR036249 Y89_4417 Y89_4418 IPR018592 Protein of unknown function DUF2024 Y89_4418 IPR023122 NE1680-like domain Y89_4419 IPR009778 Modulator of Rho-dependent transcription termination Y89_4419 IPR023534 Rof/RNase P-like Y89_4419 IPR038626 Y89_4419 Y89_4421 IPR003856 Lipopolysaccharide biosynthesis Y89_4421 IPR032807 Y89_4421 Y89_4422 IPR018636 Protein of unknown function DUF2058 Y89_4423 IPR007803 Arginine/Asparagine/Proline hydroxylase Y89_4423 IPR027443 Isopenicillin N synthase-like Y89_4424 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Y89_4424 IPR011551 NTP pyrophosphohydrolase MazG, bacterial Y89_4425 IPR002912 ACT domain Y89_4425 IPR003607 HD/PDEase domain Y89_4425 IPR004095 TGS Y89_4425 IPR004811 RelA/SpoT family Y89_4425 IPR007685 RelA/SpoT Y89_4425 IPR012675 Beta-grasp domain Y89_4425 IPR012676 TGS-like Y89_4426 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Y89_4426 IPR010280 (Uracil-5)-methyltransferase family Y89_4426 IPR012340 Nucleic acid-binding, OB-fold Y89_4426 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4426 IPR030390 Y89_4426 Y89_4426 IPR030391 Y89_4426 Y89_4427 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Y89_4427 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_4427 IPR005856 Cysteine synthase K/M Y89_4427 IPR005858 Cysteine synthase B Y89_4427 IPR036052 Y89_4427 Y89_4428 IPR000531 TonB-dependent receptor, beta-barrel Y89_4428 IPR010105 TonB-dependent siderophore receptor Y89_4428 IPR010917 TonB-dependent receptor, conserved site Y89_4428 IPR012910 TonB-dependent receptor, plug Y89_4428 IPR036942 Y89_4428 Y89_4428 IPR037066 Y89_4428 Y89_4429 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4429 IPR003660 HAMP linker domain Y89_4429 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4429 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4429 IPR031930 Y89_4429 Y89_4429 IPR036097 Y89_4429 Y89_4429 IPR036890 Y89_4429 Y89_4429 IPR038428 Y89_4429 Y89_4430 IPR001789 Signal transduction response regulator, receiver domain Y89_4430 IPR001867 Signal transduction response regulator, C-terminal Y89_4430 IPR011006 CheY-like superfamily Y89_4430 IPR016032 Signal transduction response regulator, C-terminal effector Y89_4430 IPR036388 Y89_4430 Y89_4431 IPR001789 Signal transduction response regulator, receiver domain Y89_4431 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4431 IPR003660 HAMP linker domain Y89_4431 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4431 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4431 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_4431 IPR011006 CheY-like superfamily Y89_4431 IPR019247 Histidine kinase BarA, N-terminal Y89_4431 IPR036097 Y89_4431 Y89_4431 IPR036641 Y89_4431 Y89_4431 IPR036890 Y89_4431 Y89_4432 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y89_4432 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Y89_4432 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Y89_4432 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y89_4432 IPR036291 Y89_4432 Y89_4434 IPR005184 Domain of unknown function DUF306, Meta/HslJ Y89_4434 IPR038670 Y89_4434 Y89_4435 IPR000917 Sulfatase Y89_4435 IPR012159 Membrane sulfatase, HI0842-related Y89_4435 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_4435 IPR017850 Alkaline-phosphatase-like, core domain Y89_4435 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain Y89_4436 IPR001126 DNA-repair protein, UmuC-like Y89_4436 IPR022880 DNA polymerase IV Y89_4436 IPR024728 DNA polymerase type-Y, HhH motif Y89_4436 IPR036775 Y89_4436 Y89_4439 IPR016181 Acyl-CoA N-acyltransferase Y89_4439 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Y89_4439 IPR024320 Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156 Y89_4440 IPR010333 Bacterial virulence Y89_4440 IPR011225 Type IV secretory pathway, VirJ component Y89_4440 IPR029058 Alpha/Beta hydrolase fold Y89_4441 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Y89_4441 IPR016174 Di-haem cytochrome, transmembrane Y89_4442 IPR003855 K+ potassium transporter Y89_4442 IPR023051 Potassium uptake protein, low affinity, Kup Y89_4443 IPR002792 TRAM domain Y89_4443 IPR005839 Methylthiotransferase Y89_4443 IPR005840 Ribosomal protein S12 methylthiotransferase RimO Y89_4443 IPR006638 Elongator protein 3/MiaB/NifB Y89_4443 IPR007197 Radical SAM Y89_4443 IPR013848 Methylthiotransferase, N-terminal Y89_4443 IPR020612 Methylthiotransferase, conserved site Y89_4443 IPR023404 Radical SAM, alpha/beta horseshoe Y89_4443 IPR038135 Y89_4443 Y89_4444 IPR009921 Domain of unknown function DUF1456 Y89_4446 IPR000644 CBS domain Y89_4446 IPR006667 SLC41 divalent cation transporters, integral membrane domain Y89_4446 IPR006668 Magnesium transporter, MgtE intracellular domain Y89_4446 IPR006669 Magnesium transporter MgtE Y89_4446 IPR036739 Y89_4446 Y89_4446 IPR038048 Y89_4446 Y89_4446 IPR038076 Y89_4446 Y89_4447 IPR025392 Domain of unknown function DUF4124 Y89_4450 IPR008473 Bacteriophage D3, Orf90 Y89_4451 IPR032637 Y89_4451 Y89_4453 IPR001387 Cro/C1-type helix-turn-helix domain Y89_4453 IPR010982 Lambda repressor-like, DNA-binding domain Y89_4453 IPR015927 Peptidase S24/S26A/S26B/S26C Y89_4453 IPR036286 Y89_4453 Y89_4454 IPR003751 Carbon storage regulator Y89_4454 IPR036107 Y89_4454 Y89_4455 IPR001048 Aspartate/glutamate/uridylate kinase Y89_4455 IPR001341 Aspartate kinase domain Y89_4455 IPR002912 ACT domain Y89_4455 IPR005260 Aspartate kinase, monofunctional class Y89_4455 IPR018042 Aspartate kinase, conserved site Y89_4455 IPR027795 GATS-like ACT domain Y89_4455 IPR036393 Y89_4455 Y89_4456 IPR002318 Alanine-tRNA ligase, class IIc Y89_4456 IPR003156 DHHA1 domain Y89_4456 IPR009000 Translation protein, beta-barrel domain Y89_4456 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Y89_4456 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain Y89_4456 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain Y89_4456 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal Y89_4456 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria Y89_4457 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase Y89_4457 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_4457 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_4457 IPR015424 Pyridoxal phosphate-dependent transferase Y89_4457 IPR023603 Threonine aldolase Y89_4458 IPR007036 Succinylglutamate desuccinylase/aspartoacylase Y89_4458 IPR016681 Succinylglutamate desuccinylase Y89_4460 IPR007079 Succinylarginine dihydrolase Y89_4460 IPR037031 Y89_4460 Y89_4461 IPR015590 Aldehyde dehydrogenase domain Y89_4461 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_4461 IPR016161 Aldehyde/histidinol dehydrogenase Y89_4461 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_4461 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_4461 IPR017649 Succinylglutamic semialdehyde dehydrogenase Y89_4461 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_4462 IPR007041 Arginine N-succinyltransferase Ast/AOST Y89_4462 IPR016181 Acyl-CoA N-acyltransferase Y89_4462 IPR017650 Arginine N-succinyltransferase AstA Y89_4463 IPR007041 Arginine N-succinyltransferase Ast/AOST Y89_4463 IPR016181 Acyl-CoA N-acyltransferase Y89_4463 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit Y89_4464 IPR004636 Acetylornithine/Succinylornithine transaminase family Y89_4464 IPR005814 Aminotransferase class-III Y89_4464 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_4464 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_4464 IPR015424 Pyridoxal phosphate-dependent transferase Y89_4464 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria Y89_4466 IPR009057 Homeodomain-like Y89_4466 IPR018060 DNA binding HTH domain, AraC-type Y89_4466 IPR018062 HTH domain AraC-type, conserved site Y89_4466 IPR020449 Transcription regulator HTH, AraC- type Y89_4466 IPR029062 Class I glutamine amidotransferase-like Y89_4467 IPR003439 ABC transporter-like Y89_4467 IPR003593 AAA+ ATPase domain Y89_4467 IPR017871 ABC transporter, conserved site Y89_4467 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4467 IPR030679 Y89_4467 Y89_4468 IPR007036 Succinylglutamate desuccinylase/aspartoacylase Y89_4469 IPR000515 MetI-like domain Y89_4469 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_4469 IPR035906 Y89_4469 Y89_4470 IPR000515 MetI-like domain Y89_4470 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_4470 IPR035906 Y89_4470 Y89_4471 IPR001638 Extracellular solute-binding protein, family 3 Y89_4471 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein Y89_4471 IPR018313 Extracellular solute-binding protein, family 3, conserved site Y89_4472 IPR000873 AMP-dependent synthetase/ligase Y89_4472 IPR011904 Acetate-CoA ligase Y89_4472 IPR020845 AMP-binding, conserved site Y89_4472 IPR025110 AMP-binding enzyme C-terminal domain Y89_4472 IPR032387 Y89_4472 Y89_4473 IPR004681 TRAP transporter permease protein Y89_4473 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Y89_4474 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component Y89_4475 IPR004682 TRAP dicarboxylate transporter Y89_4475 IPR018389 Bacterial extracellular solute-binding protein, family 7 Y89_4475 IPR038404 Y89_4475 Y89_4476 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Y89_4476 IPR011206 Citrate lyase beta subunit-like Y89_4476 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_4477 IPR003673 CoA-transferase family III Y89_4477 IPR023606 CoA-transferase family III domain Y89_4478 IPR005656 MmgE/PrpD Y89_4478 IPR036148 Y89_4478 Y89_4479 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_4479 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_4480 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_4480 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_4480 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_4480 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_4480 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_4480 IPR036250 Y89_4480 Y89_4480 IPR037069 Y89_4480 Y89_4481 IPR029069 HotDog domain Y89_4481 IPR039569 Y89_4481 Y89_4482 IPR000847 Transcription regulator HTH, LysR Y89_4482 IPR005119 LysR, substrate-binding Y89_4482 IPR036388 Y89_4482 Y89_4482 IPR036390 Y89_4482 Y89_4483 IPR000847 Transcription regulator HTH, LysR Y89_4483 IPR005119 LysR, substrate-binding Y89_4483 IPR036388 Y89_4483 Y89_4483 IPR036390 Y89_4483 Y89_4484 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein Y89_4485 IPR021245 Protein of unknown function DUF2790 Y89_4486 IPR000014 PAS domain Y89_4486 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_4486 IPR002912 ACT domain Y89_4486 IPR003593 AAA+ ATPase domain Y89_4486 IPR009057 Homeodomain-like Y89_4486 IPR013767 PAS fold Y89_4486 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_4486 IPR025944 Sigma-54 interaction domain, conserved site Y89_4486 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4486 IPR030828 Y89_4486 Y89_4486 IPR035965 Y89_4486 Y89_4487 IPR005960 Phenylalanine-4-hydroxylase, monomeric form Y89_4487 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site Y89_4487 IPR019774 Aromatic amino acid hydroxylase, C-terminal Y89_4487 IPR036329 Y89_4487 Y89_4487 IPR036951 Y89_4487 Y89_4488 IPR001533 Transcriptional coactivator/pterin dehydratase Y89_4488 IPR036428 Y89_4488 Y89_4489 IPR000796 Aspartate/other aminotransferase Y89_4489 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Y89_4489 IPR004839 Aminotransferase, class I/classII Y89_4489 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_4489 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_4489 IPR015424 Pyridoxal phosphate-dependent transferase Y89_4490 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Y89_4490 IPR012338 Beta-lactamase/transpeptidase-like Y89_4490 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Y89_4491 IPR000352 Peptide chain release factor class I/class II Y89_4492 IPR018660 C-type lysozyme, inhibitor Y89_4492 IPR036328 Y89_4492 Y89_4493 IPR002293 Amino acid/polyamine transporter I Y89_4493 IPR004840 Amino acid permease, conserved site Y89_4493 IPR004841 Amino acid permease/ SLC12A domain Y89_4494 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_4494 IPR005956 4-hydroxyphenylpyruvate dioxygenase Y89_4494 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_4495 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_4495 IPR009057 Homeodomain-like Y89_4495 IPR011051 RmlC-like cupin domain Y89_4495 IPR014710 RmlC-like jelly roll fold Y89_4495 IPR018060 DNA binding HTH domain, AraC-type Y89_4495 IPR018062 HTH domain AraC-type, conserved site Y89_4496 IPR009872 Protein of unknown function DUF1427 Y89_4496 IPR020017 XapX domain Y89_4497 IPR011032 GroES (chaperonin 10)-like Y89_4497 IPR013149 Alcohol dehydrogenase, C-terminal Y89_4497 IPR013154 Alcohol dehydrogenase GroES-like Y89_4497 IPR020843 Polyketide synthase, enoylreductase Y89_4497 IPR036291 Y89_4497 Y89_4498 IPR016084 Haem oxygenase-like, multi-helical Y89_4499 IPR000014 PAS domain Y89_4499 IPR000160 GGDEF domain Y89_4499 IPR001633 EAL domain Y89_4499 IPR013767 PAS fold Y89_4499 IPR029787 Nucleotide cyclase Y89_4499 IPR035919 Y89_4499 Y89_4499 IPR035965 Y89_4499 Y89_4500 IPR003439 ABC transporter-like Y89_4500 IPR003593 AAA+ ATPase domain Y89_4500 IPR011527 ABC transporter type 1, transmembrane domain Y89_4500 IPR017871 ABC transporter, conserved site Y89_4500 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4500 IPR036640 Y89_4500 Y89_4501 IPR001853 DSBA-like thioredoxin domain Y89_4501 IPR036249 Y89_4501 Y89_4502 IPR001763 Rhodanese-like domain Y89_4502 IPR020936 Uncharacterised protein family UPF0176 Y89_4502 IPR036873 Y89_4502 Y89_4503 IPR002634 BolA protein Y89_4503 IPR036065 Y89_4503 Y89_4504 IPR018637 Domain of unknown function DUF2059 Y89_4505 IPR021243 Protein of unknown function DUF2804 Y89_4506 IPR000362 Fumarate lyase family Y89_4506 IPR005677 Fumarate hydratase, class II Y89_4506 IPR008948 L-Aspartase-like Y89_4506 IPR018951 Fumarase C, C-terminal Y89_4506 IPR020557 Fumarate lyase, conserved site Y89_4506 IPR022761 Fumarate lyase, N-terminal Y89_4506 IPR024083 Fumarase/histidase, N-terminal Y89_4507 IPR003680 Flavodoxin-like fold Y89_4507 IPR029039 Flavoprotein-like Y89_4508 IPR004302 Chitin-binding, domain 3 Y89_4508 IPR014756 Immunoglobulin E-set Y89_4509 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Y89_4509 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Y89_4509 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Y89_4509 IPR036052 Y89_4509 Y89_4510 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein Y89_4510 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain Y89_4511 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II Y89_4511 IPR005982 Thioredoxin reductase Y89_4511 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Y89_4511 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_4511 IPR036188 Y89_4511 Y89_4512 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Y89_4512 IPR019479 Peroxiredoxin, C-terminal Y89_4512 IPR024706 Peroxiredoxin, AhpC-type Y89_4512 IPR036249 Y89_4512 Y89_4513 IPR000014 PAS domain Y89_4513 IPR000160 GGDEF domain Y89_4513 IPR001610 PAC motif Y89_4513 IPR003660 HAMP linker domain Y89_4513 IPR007892 CHASE4 Y89_4513 IPR013767 PAS fold Y89_4513 IPR029787 Nucleotide cyclase Y89_4513 IPR035965 Y89_4513 Y89_4514 IPR022985 CysZ, gammaproteobacteria Y89_4515 IPR031329 Y89_4515 Y89_4515 IPR031331 Y89_4515 Y89_4515 IPR038445 Y89_4515 Y89_4516 IPR007312 Phosphoesterase Y89_4516 IPR008475 Bacterial phospholipase C, C-terminal domain Y89_4516 IPR017767 Bacterial phospholipase C, phosphocholine-specific Y89_4516 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_4517 IPR017769 Phospholipase C accessory protein PlcR Y89_4518 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Y89_4519 IPR003797 DegV Y89_4520 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_4520 IPR013785 Aldolase-type TIM barrel Y89_4521 IPR001647 DNA-binding HTH domain, TetR-type Y89_4521 IPR009057 Homeodomain-like Y89_4521 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Y89_4521 IPR036271 Y89_4521 Y89_4522 IPR000889 Glutathione peroxidase Y89_4522 IPR029759 Glutathione peroxidase active site Y89_4522 IPR036249 Y89_4522 Y89_4523 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain Y89_4524 IPR000890 Aliphatic acid kinase, short-chain Y89_4524 IPR004372 Acetate/Proprionate kinase Y89_4524 IPR023865 Aliphatic acid kinase, short-chain, conserved site Y89_4525 IPR002505 Phosphate acetyl/butaryl transferase Y89_4525 IPR004614 Phosphate acetyltransferase Y89_4525 IPR010766 DRTGG Y89_4525 IPR016475 Phosphate acetyltransferase, bacteria Y89_4525 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4525 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like Y89_4526 IPR002123 Phospholipid/glycerol acyltransferase Y89_4527 IPR006664 Outer membrane protein, bacterial Y89_4527 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_4527 IPR036737 Y89_4527 Y89_4527 IPR039567 Y89_4527 Y89_4528 IPR001279 Beta-lactamase-like Y89_4528 IPR036866 Y89_4528 Y89_4529 IPR009057 Homeodomain-like Y89_4529 IPR018060 DNA binding HTH domain, AraC-type Y89_4529 IPR020449 Transcription regulator HTH, AraC- type Y89_4529 IPR032687 Y89_4529 Y89_4530 IPR016516 Uncharacterised conserved protein UCP07580 Y89_4531 IPR000073 Alpha/beta hydrolase fold-1 Y89_4531 IPR000639 Epoxide hydrolase-like Y89_4531 IPR029058 Alpha/Beta hydrolase fold Y89_4532 IPR001647 DNA-binding HTH domain, TetR-type Y89_4532 IPR009057 Homeodomain-like Y89_4532 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y89_4535 IPR002104 Integrase, catalytic Y89_4535 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_4535 IPR013762 Integrase-like, catalytic core Y89_4538 IPR010982 Lambda repressor-like, DNA-binding domain Y89_4538 IPR039554 Y89_4538 Y89_4540 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_4540 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_4541 IPR000847 Transcription regulator HTH, LysR Y89_4541 IPR005119 LysR, substrate-binding Y89_4541 IPR036388 Y89_4541 Y89_4541 IPR036390 Y89_4541 Y89_4542 IPR000847 Transcription regulator HTH, LysR Y89_4542 IPR005119 LysR, substrate-binding Y89_4542 IPR036388 Y89_4542 Y89_4542 IPR036390 Y89_4542 Y89_4543 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like Y89_4543 IPR035959 Y89_4543 Y89_4544 IPR000192 Aminotransferase class V domain Y89_4544 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_4544 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_4544 IPR015424 Pyridoxal phosphate-dependent transferase Y89_4545 IPR008567 3-keto-5-aminohexanoate cleavage enzyme Y89_4545 IPR013785 Aldolase-type TIM barrel Y89_4546 IPR011701 Major facilitator superfamily Y89_4546 IPR036259 Y89_4546 Y89_4547 IPR006328 Haloacid dehalogenase, type II Y89_4547 IPR006439 HAD hydrolase, subfamily IA Y89_4547 IPR023198 Phosphoglycolate phosphatase, domain 2 Y89_4547 IPR023214 HAD-like domain Y89_4547 IPR036412 Y89_4547 Y89_4548 IPR001046 NRAMP family Y89_4549 IPR013538 Activator of Hsp90 ATPase homologue 1-like Y89_4549 IPR023393 START-like domain Y89_4550 IPR002502 N-acetylmuramoyl-L-alanine amidase domain Y89_4550 IPR036365 Y89_4550 Y89_4550 IPR036366 Y89_4550 Y89_4550 IPR036505 Y89_4550 Y89_4553 IPR020471 Aldo/keto reductase subgroup Y89_4553 IPR023210 NADP-dependent oxidoreductase domain Y89_4553 IPR036812 Y89_4553 Y89_4554 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_4554 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_4555 IPR021762 Protein of unknown function DUF3325 Y89_4556 IPR005625 PepSY-associated TM helix Y89_4557 IPR022109 Protein of unknown function DUF3649 Y89_4558 IPR000330 SNF2-related Y89_4558 IPR001650 Helicase, C-terminal Y89_4558 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_4558 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4558 IPR038718 Y89_4558 Y89_4559 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4560 IPR000524 Transcription regulator HTH, GntR Y89_4560 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_4560 IPR011711 GntR, C-terminal Y89_4560 IPR036388 Y89_4560 Y89_4560 IPR036390 Y89_4560 Y89_4561 IPR012695 Methylisocitrate lyase Y89_4561 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_4561 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site Y89_4562 IPR002020 Citrate synthase-like Y89_4562 IPR011278 2-methylcitrate synthase/citrate synthase type I Y89_4562 IPR016142 Citrate synthase-like, large alpha subdomain Y89_4562 IPR016143 Citrate synthase-like, small alpha subdomain Y89_4562 IPR019810 Citrate synthase active site Y89_4562 IPR024176 Citrate synthase, bacterial-type Y89_4562 IPR036969 Y89_4562 Y89_4563 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel Y89_4563 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Y89_4563 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent Y89_4563 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Y89_4563 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Y89_4563 IPR036008 Y89_4563 Y89_4564 IPR007400 PrpF protein Y89_4564 IPR012709 PrpF, AcnD-accessory Y89_4565 IPR005656 MmgE/PrpD Y89_4565 IPR012705 2-methylcitrate dehydratase PrpD Y89_4565 IPR036148 Y89_4565 Y89_4566 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_4566 IPR009057 Homeodomain-like Y89_4566 IPR011051 RmlC-like cupin domain Y89_4566 IPR014710 RmlC-like jelly roll fold Y89_4566 IPR018060 DNA binding HTH domain, AraC-type Y89_4566 IPR018062 HTH domain AraC-type, conserved site Y89_4566 IPR020449 Transcription regulator HTH, AraC- type Y89_4567 IPR002781 Transmembrane protein TauE like Y89_4568 IPR002293 Amino acid/polyamine transporter I Y89_4568 IPR004840 Amino acid permease, conserved site Y89_4568 IPR004841 Amino acid permease/ SLC12A domain Y89_4570 IPR001264 Glycosyl transferase, family 51 Y89_4570 IPR012338 Beta-lactamase/transpeptidase-like Y89_4570 IPR023346 Lysozyme-like domain Y89_4570 IPR036950 Y89_4570 Y89_4571 IPR003959 ATPase, AAA-type, core Y89_4571 IPR014555 RecF-like Y89_4571 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4572 IPR000390 Small multidrug resistance protein family Y89_4573 IPR003680 Flavodoxin-like fold Y89_4573 IPR023048 NADH-azoreductase, FMN-dependent Y89_4573 IPR029039 Flavoprotein-like Y89_4574 IPR000847 Transcription regulator HTH, LysR Y89_4574 IPR005119 LysR, substrate-binding Y89_4574 IPR036388 Y89_4574 Y89_4574 IPR036390 Y89_4574 Y89_4575 IPR001734 Sodium/solute symporter Y89_4575 IPR011851 Sodium/proline symporter Y89_4575 IPR018212 Sodium/solute symporter, conserved site Y89_4575 IPR038377 Y89_4575 Y89_4576 IPR002872 Proline dehydrogenase domain Y89_4576 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 Y89_4576 IPR015590 Aldehyde dehydrogenase domain Y89_4576 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_4576 IPR016161 Aldehyde/histidinol dehydrogenase Y89_4576 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_4576 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_4576 IPR024082 Proline dehydrogenase PutA, domain II Y89_4576 IPR024089 Proline dehydrogenase PutA, domain I/II Y89_4576 IPR025703 Bifunctional protein PutA Y89_4576 IPR029041 FAD-linked oxidoreductase-like Y89_4577 IPR000531 TonB-dependent receptor, beta-barrel Y89_4577 IPR012910 TonB-dependent receptor, plug Y89_4577 IPR036942 Y89_4577 Y89_4577 IPR037066 Y89_4577 Y89_4578 IPR009057 Homeodomain-like Y89_4578 IPR011051 RmlC-like cupin domain Y89_4578 IPR018060 DNA binding HTH domain, AraC-type Y89_4579 IPR003111 Peptidase S16, lon N-terminal Y89_4579 IPR003593 AAA+ ATPase domain Y89_4579 IPR003959 ATPase, AAA-type, core Y89_4579 IPR004815 Lon protease, bacterial/eukaryotic-type Y89_4579 IPR008268 Peptidase S16, active site Y89_4579 IPR008269 Peptidase S16, Lon C-terminal Y89_4579 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_4579 IPR015947 PUA-like domain Y89_4579 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_4579 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4579 IPR027543 Lon protease, bacterial Y89_4580 IPR018990 Proteinase inhibitor I42, chagasin Y89_4580 IPR036331 Y89_4580 Y89_4583 IPR005271 tRNA (cmo5U34)-methyltransferase Y89_4583 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4584 IPR010017 tRNA (mo5U34)-methyltransferase Y89_4584 IPR027555 tRNA (mo5U34)-methyltransferase-like Y89_4584 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4585 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ Y89_4585 IPR013785 Aldolase-type TIM barrel Y89_4585 IPR036130 Y89_4585 Y89_4586 IPR003717 Recombination protein O, RecO Y89_4586 IPR012340 Nucleic acid-binding, OB-fold Y89_4586 IPR022572 DNA replication/recombination mediator RecO, N-terminal Y89_4586 IPR037278 Y89_4586 Y89_4587 IPR004044 K Homology domain, type 2 Y89_4587 IPR005225 Small GTP-binding protein domain Y89_4587 IPR005662 GTP-binding protein Era Y89_4587 IPR006073 GTP binding domain Y89_4587 IPR009019 K homology domain, prokaryotic type Y89_4587 IPR015946 K homology domain-like, alpha/beta Y89_4587 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4588 IPR000999 Ribonuclease III domain Y89_4588 IPR011907 Ribonuclease III Y89_4588 IPR014720 Double-stranded RNA-binding domain Y89_4588 IPR036389 Y89_4588 Y89_4589 IPR032314 Y89_4589 Y89_4590 IPR000223 Peptidase S26A, signal peptidase I Y89_4590 IPR015927 Peptidase S24/S26A/S26B/S26C Y89_4590 IPR019756 Peptidase S26A, signal peptidase I, serine active site Y89_4590 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Y89_4590 IPR019758 Peptidase S26A, signal peptidase I, conserved site Y89_4590 IPR036286 Y89_4590 Y89_4591 IPR000640 Translation elongation factor EFG, V domain Y89_4591 IPR000795 Elongation factor, GTP-binding domain Y89_4591 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Y89_4591 IPR005225 Small GTP-binding protein domain Y89_4591 IPR006297 Elongation factor 4 Y89_4591 IPR013842 GTP-binding protein LepA, C-terminal Y89_4591 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4591 IPR035647 Y89_4591 Y89_4591 IPR038363 Y89_4591 Y89_4592 IPR001478 PDZ domain Y89_4592 IPR001940 Peptidase S1C Y89_4592 IPR009003 Trypsin-like cysteine/serine peptidase domain Y89_4592 IPR011782 Peptidase S1C, Do Y89_4592 IPR036034 Y89_4592 Y89_4593 IPR026268 Protein RseC Y89_4594 IPR005588 MucB/RseB Y89_4594 IPR033434 Y89_4594 Y89_4594 IPR033436 Y89_4594 Y89_4594 IPR038484 Y89_4594 Y89_4595 IPR005572 Anti sigma-E protein RseA, N-terminal Y89_4595 IPR005573 Anti sigma-E protein RseA, C-terminal Y89_4595 IPR036147 Y89_4595 Y89_4596 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Y89_4596 IPR007627 RNA polymerase sigma-70 region 2 Y89_4596 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_4596 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_4596 IPR013325 RNA polymerase sigma factor, region 2 Y89_4596 IPR014284 RNA polymerase sigma-70 like domain Y89_4596 IPR014286 RNA polymerase sigma-70 RpoE type Y89_4596 IPR036388 Y89_4596 Y89_4597 IPR003953 FAD binding domain Y89_4597 IPR005288 L-aspartate oxidase Y89_4597 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Y89_4597 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Y89_4597 IPR036188 Y89_4597 Y89_4597 IPR037099 Y89_4597 Y89_4599 IPR005631 Flavinator of succinate dehydrogenase Y89_4599 IPR036714 Y89_4599 Y89_4600 IPR017703 YgfZ/GcvT conserved site Y89_4600 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain Y89_4601 IPR013976 Metal-dependent hydrolase HDOD Y89_4602 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4602 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4602 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4602 IPR013727 Two-component sensor kinase N-terminal Y89_4602 IPR036097 Y89_4602 Y89_4602 IPR036890 Y89_4602 Y89_4603 IPR001789 Signal transduction response regulator, receiver domain Y89_4603 IPR001867 Signal transduction response regulator, C-terminal Y89_4603 IPR011006 CheY-like superfamily Y89_4603 IPR036388 Y89_4603 Y89_4604 IPR005318 Outer membrane porin, bacterial Y89_4604 IPR023614 Porin domain Y89_4605 IPR005064 Bordetella uptake gene Y89_4606 IPR009936 Protein of unknown function DUF1468 Y89_4607 IPR002823 Protein of unknown function DUF112, transmembrane Y89_4608 IPR007820 AbrB family Y89_4608 IPR017516 AbrB duplication Y89_4609 IPR002043 Uracil-DNA glycosylase Y89_4609 IPR005122 Uracil-DNA glycosylase-like Y89_4609 IPR018085 Uracil-DNA glycosylase, active site Y89_4609 IPR036895 Y89_4609 Y89_4610 IPR007391 Vancomycin resistance VanW Y89_4611 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_4611 IPR009057 Homeodomain-like Y89_4611 IPR018060 DNA binding HTH domain, AraC-type Y89_4611 IPR018062 HTH domain AraC-type, conserved site Y89_4611 IPR020449 Transcription regulator HTH, AraC- type Y89_4611 IPR037923 Y89_4611 Y89_4612 IPR010061 Methylmalonate-semialdehyde dehydrogenase Y89_4612 IPR015590 Aldehyde dehydrogenase domain Y89_4612 IPR016161 Aldehyde/histidinol dehydrogenase Y89_4612 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_4612 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_4613 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_4613 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_4613 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_4613 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_4613 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_4613 IPR036250 Y89_4613 Y89_4613 IPR037069 Y89_4613 Y89_4614 IPR001753 Crotonase superfamily Y89_4614 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Y89_4614 IPR029045 ClpP/crotonase-like domain Y89_4615 IPR029045 ClpP/crotonase-like domain Y89_4615 IPR032259 Y89_4615 Y89_4616 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Y89_4616 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Y89_4616 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_4616 IPR011548 3-hydroxyisobutyrate dehydrogenase Y89_4616 IPR013328 Dehydrogenase, multihelical Y89_4616 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type Y89_4616 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Y89_4616 IPR036291 Y89_4616 Y89_4617 IPR013099 Two pore domain potassium channel domain Y89_4618 IPR016040 NAD(P)-binding domain Y89_4618 IPR036291 Y89_4618 Y89_4619 IPR001279 Beta-lactamase-like Y89_4619 IPR029228 Alkyl sulfatase dimerisation domain Y89_4619 IPR029229 Alkyl sulfatase, C-terminal Y89_4619 IPR036527 Y89_4619 Y89_4619 IPR036866 Y89_4619 Y89_4619 IPR038536 Y89_4619 Y89_4620 IPR000847 Transcription regulator HTH, LysR Y89_4620 IPR005119 LysR, substrate-binding Y89_4620 IPR036388 Y89_4620 Y89_4620 IPR036390 Y89_4620 Y89_4622 IPR009525 Protein of unknown function DUF1145 Y89_4625 IPR018677 Protein of unknown function DUF2157, membrane Y89_4626 IPR032249 Y89_4626 Y89_4627 IPR032720 Y89_4627 Y89_4628 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Y89_4628 IPR002942 RNA-binding S4 domain Y89_4628 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Y89_4628 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Y89_4628 IPR020103 Pseudouridine synthase, catalytic domain Y89_4628 IPR036986 Y89_4628 Y89_4629 IPR005490 L,D-transpeptidase catalytic domain Y89_4629 IPR016915 Uncharacterised conserved protein UCP029342 Y89_4629 IPR038063 Y89_4629 Y89_4630 IPR032676 Y89_4630 Y89_4631 IPR000073 Alpha/beta hydrolase fold-1 Y89_4631 IPR029058 Alpha/Beta hydrolase fold Y89_4632 IPR002104 Integrase, catalytic Y89_4632 IPR010998 Integrase, Lambda-type, N-terminal Y89_4632 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_4632 IPR013762 Integrase-like, catalytic core Y89_4632 IPR025166 Domain of unknown function DUF4102 Y89_4632 IPR038488 Y89_4632 Y89_4634 IPR010260 Bacteriophage P4, Orf88 Y89_4635 IPR025669 AAA domain Y89_4635 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4637 IPR022304 Integrating conjugative element, PFGI-1, ParB Y89_4637 IPR036086 Y89_4637 Y89_4638 IPR021364 Protein of unknown function DUF2857 Y89_4640 IPR014996 Integrating conjugative element protein, PFL4669 Y89_4641 IPR021502 Protein of unknown function DUF3158 Y89_4642 IPR000424 Primosome PriB/single-strand DNA-binding Y89_4642 IPR012340 Nucleic acid-binding, OB-fold Y89_4643 IPR003601 DNA topoisomerase, type IA, domain 2 Y89_4643 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Y89_4643 IPR005738 DNA topoisomerase III Y89_4643 IPR006171 Toprim domain Y89_4643 IPR013497 DNA topoisomerase, type IA, central Y89_4643 IPR013498 DNA topoisomerase, type IA, zn finger Y89_4643 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Y89_4643 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Y89_4643 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Y89_4643 IPR023405 DNA topoisomerase, type IA, core domain Y89_4643 IPR023406 DNA topoisomerase, type IA, active site Y89_4650 IPR021960 Protein of unknown function DUF3577 Y89_4651 IPR021693 Protein of unknown function DUF3275 Y89_4654 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Y89_4654 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4656 IPR001650 Helicase, C-terminal Y89_4656 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_4656 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4656 IPR038718 Y89_4656 Y89_4657 IPR022260 Integrating conjugative element protein PilL, PFGI-1 Y89_4659 IPR022293 Integrating conjugative element protein, PFL4693 Y89_4660 IPR008258 Lytic transglycosylase-like SLT domain Y89_4660 IPR023346 Lysozyme-like domain Y89_4661 IPR021300 Integrating conjugative element protein, PFL4695 Y89_4662 IPR022458 Conjugative coupling factor TraG/TraD Y89_4662 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 Y89_4662 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4662 IPR032689 Y89_4662 Y89_4663 IPR022266 Integrating conjugative element protein, PFL4697-type Y89_4665 IPR019110 Uncharacterised protein family, RAQPRD Y89_4666 IPR021676 Protein of unknown function DUF3262 Y89_4667 IPR021356 Integrating conjugative element protein PFL4702 Y89_4668 IPR021877 Protein of unknown function DUF3487 Y89_4669 IPR021548 Protein of unknown function DUF2895 Y89_4670 IPR021844 Integrating conjugative element protein, PFL4704 Y89_4671 IPR021207 Integrating conjugative element protein, PFL4705 Y89_4672 IPR022262 Lipoprotein, putative Y89_4673 IPR022303 Conjugative transfer ATPase Y89_4673 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase Y89_4673 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4674 IPR012336 Thioredoxin-like fold Y89_4674 IPR036249 Y89_4674 Y89_4675 IPR001405 RadC protein Y89_4675 IPR025657 RadC-like JAB domain Y89_4676 IPR011090 Integrating conjugative element protein, PFL4709 Y89_4677 IPR009649 TraU Y89_4677 IPR026331 Integrating conjugative element protein PFL_4710 Y89_4678 IPR021204 Integrating conjugative element protein, PFL4711 Y89_4680 IPR012931 TraG-like, N-terminal Y89_4681 IPR022213 Protein of unknown function DUF3742 Y89_4682 IPR021679 Toxin endonuclease, YhaV Y89_4683 IPR007159 AbrB-like domain Y89_4683 IPR031848 Y89_4683 Y89_4683 IPR037914 Y89_4683 Y89_4684 IPR011093 Domain of unknown function DUF1528, C-terminal Y89_4684 IPR011119 Uncharacterised domain, helicase/relaxase, putative Y89_4684 IPR022391 Integrating conjugative element relaxase, PFGI-1 class Y89_4684 IPR036388 Y89_4684 Y89_4684 IPR036390 Y89_4684 Y89_4686 IPR002513 Tn3 transposase DDE domain Y89_4686 IPR025296 Domain of unknown function DUF4158 Y89_4687 IPR002513 Tn3 transposase DDE domain Y89_4687 IPR025296 Domain of unknown function DUF4158 Y89_4688 IPR006118 Recombinase, conserved site Y89_4688 IPR006119 Resolvase, N-terminal Y89_4688 IPR006120 Resolvase, HTH domain Y89_4688 IPR009057 Homeodomain-like Y89_4688 IPR036162 Y89_4688 Y89_4689 IPR008490 Transposase InsH, N-terminal Y89_4689 IPR025668 Transposase DDE domain Y89_4690 IPR002104 Integrase, catalytic Y89_4690 IPR004107 Integrase, SAM-like, N-terminal Y89_4690 IPR010998 Integrase, Lambda-type, N-terminal Y89_4690 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_4690 IPR011946 Integrase, integron-type Y89_4690 IPR013762 Integrase-like, catalytic core Y89_4691 IPR019646 Aminoglycoside-2''-adenylyltransferase Y89_4692 IPR001460 Penicillin-binding protein, transpeptidase Y89_4692 IPR002137 Beta-lactamase, class-D active site Y89_4692 IPR012338 Beta-lactamase/transpeptidase-like Y89_4693 IPR016181 Acyl-CoA N-acyltransferase Y89_4693 IPR030971 Y89_4693 Y89_4694 IPR006118 Recombinase, conserved site Y89_4694 IPR006119 Resolvase, N-terminal Y89_4694 IPR009057 Homeodomain-like Y89_4694 IPR036162 Y89_4694 Y89_4695 IPR002513 Tn3 transposase DDE domain Y89_4695 IPR025296 Domain of unknown function DUF4158 Y89_4696 IPR007069 Transposase, IS801/IS1294 Y89_4696 IPR026889 Transposase zinc-binding domain Y89_4697 IPR002423 Chaperonin Cpn60/TCP-1 Y89_4697 IPR004107 Integrase, SAM-like, N-terminal Y89_4697 IPR010998 Integrase, Lambda-type, N-terminal Y89_4697 IPR027413 GroEL-like equatorial domain Y89_4698 IPR002575 Aminoglycoside phosphotransferase Y89_4698 IPR011009 Protein kinase-like domain Y89_4698 IPR024165 Aminoglycoside 3-phosphotransferase Y89_4699 IPR007069 Transposase, IS801/IS1294 Y89_4699 IPR026889 Transposase zinc-binding domain Y89_4700 IPR002423 Chaperonin Cpn60/TCP-1 Y89_4700 IPR004107 Integrase, SAM-like, N-terminal Y89_4700 IPR010998 Integrase, Lambda-type, N-terminal Y89_4700 IPR027413 GroEL-like equatorial domain Y89_4701 IPR000489 Pterin-binding Y89_4701 IPR006390 Dihydropteroate synthase Y89_4701 IPR011005 Dihydropteroate synthase-like Y89_4702 IPR000182 GNAT domain Y89_4702 IPR016181 Acyl-CoA N-acyltransferase Y89_4703 IPR011701 Major facilitator superfamily Y89_4703 IPR036259 Y89_4703 Y89_4704 IPR012337 Ribonuclease H-like domain Y89_4704 IPR032874 Y89_4704 Y89_4705 IPR000551 MerR-type HTH domain Y89_4705 IPR009061 DNA binding domain, putative Y89_4705 IPR015358 Transcription regulator MerR, DNA binding Y89_4706 IPR003457 Mercuric transport protein MerT Y89_4707 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ Y89_4707 IPR006121 Heavy metal-associated domain, HMA Y89_4707 IPR011795 Mercuric transport protein periplasmic component Y89_4707 IPR017969 Heavy-metal-associated, conserved site Y89_4707 IPR036163 Y89_4707 Y89_4708 IPR001100 Y89_4708 Y89_4708 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y89_4708 IPR006121 Heavy metal-associated domain, HMA Y89_4708 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Y89_4708 IPR016156 FAD/NAD-linked reductase, dimerisation domain Y89_4708 IPR017969 Heavy-metal-associated, conserved site Y89_4708 IPR021179 Mercury reductase, MerA Y89_4708 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_4708 IPR036163 Y89_4708 Y89_4708 IPR036188 Y89_4708 Y89_4709 IPR000551 MerR-type HTH domain Y89_4709 IPR009061 DNA binding domain, putative Y89_4709 IPR011797 Mercuric resistence transcriptional repressor protein MerD Y89_4710 IPR012337 Ribonuclease H-like domain Y89_4710 IPR032874 Y89_4710 Y89_4711 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Y89_4711 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Y89_4711 IPR002941 DNA methylase N-4/N-6 Y89_4711 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4712 IPR004919 Domain of unknown function DUF262 Y89_4712 IPR011089 Domain of unknown function DUF1524 Y89_4713 IPR025503 Protein of unknown function DUF4391 Y89_4714 IPR000330 SNF2-related Y89_4714 IPR001650 Helicase, C-terminal Y89_4714 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_4714 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4714 IPR038718 Y89_4714 Y89_4715 IPR016634 Transcription regulator, DeoR type, predicted Y89_4715 IPR026881 WYL domain Y89_4716 IPR000847 Transcription regulator HTH, LysR Y89_4716 IPR005119 LysR, substrate-binding Y89_4716 IPR036388 Y89_4716 Y89_4716 IPR036390 Y89_4716 Y89_4717 IPR003593 AAA+ ATPase domain Y89_4717 IPR003959 ATPase, AAA-type, core Y89_4717 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4718 IPR000209 Peptidase S8/S53 domain Y89_4718 IPR015500 Peptidase S8, subtilisin-related Y89_4718 IPR036852 Y89_4718 Y89_4720 IPR021268 Protein of unknown function DUF2845 Y89_4721 IPR018654 Protein of unknown function DUF2084 Y89_4722 IPR016181 Acyl-CoA N-acyltransferase Y89_4723 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_4723 IPR004361 Glyoxalase I Y89_4723 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_4724 IPR007138 Antibiotic biosynthesis monooxygenase-like domain Y89_4724 IPR011008 Dimeric alpha-beta barrel Y89_4725 IPR000847 Transcription regulator HTH, LysR Y89_4725 IPR005119 LysR, substrate-binding Y89_4725 IPR036388 Y89_4725 Y89_4725 IPR036390 Y89_4725 Y89_4726 IPR001633 EAL domain Y89_4726 IPR035919 Y89_4726 Y89_4727 IPR001451 Bacterial transferase hexapeptide repeat Y89_4727 IPR011004 Trimeric LpxA-like Y89_4728 IPR001173 Glycosyltransferase 2-like Y89_4728 IPR029044 Nucleotide-diphospho-sugar transferases Y89_4729 IPR023631 Amidase signature domain Y89_4729 IPR036928 Y89_4729 Y89_4730 IPR005828 General substrate transporter Y89_4730 IPR005829 Sugar transporter, conserved site Y89_4730 IPR036259 Y89_4730 Y89_4731 IPR006694 Fatty acid hydroxylase Y89_4732 IPR018060 DNA binding HTH domain, AraC-type Y89_4733 IPR000847 Transcription regulator HTH, LysR Y89_4733 IPR005119 LysR, substrate-binding Y89_4733 IPR036388 Y89_4733 Y89_4733 IPR036390 Y89_4733 Y89_4735 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Y89_4735 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Y89_4736 IPR019660 Putative sensory transduction regulator YbjN Y89_4738 IPR032638 Y89_4738 Y89_4739 IPR006260 TonB, C-terminal Y89_4740 IPR003400 Biopolymer transport protein ExbD/TolR Y89_4741 IPR002898 MotA/TolQ/ExbB proton channel Y89_4741 IPR006558 LamG-like jellyroll fold Y89_4741 IPR013320 Concanavalin A-like lectin/glucanase, subgroup Y89_4741 IPR018765 Domain of unknown function DUF2341 Y89_4742 IPR005565 Haemolysin activator HlyB Y89_4742 IPR013686 Polypeptide-transport-associated, ShlB-type Y89_4743 IPR008490 Transposase InsH, N-terminal Y89_4743 IPR036165 Y89_4743 Y89_4744 IPR008638 Filamentous haemagglutinin, N-terminal Y89_4744 IPR011050 Pectin lyase fold/virulence factor Y89_4744 IPR012334 Pectin lyase fold Y89_4744 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 Y89_4745 IPR024370 PBP domain Y89_4746 IPR003004 GspF/PilC family Y89_4746 IPR011850 General secretion pathway protein F Y89_4746 IPR018076 Type II secretion system F domain Y89_4747 IPR001482 Type II secretion system protein E Y89_4747 IPR003593 AAA+ ATPase domain Y89_4747 IPR013369 Type II secretion system GspE Y89_4747 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4747 IPR037257 Y89_4747 Y89_4748 IPR001775 GspD/PilQ family Y89_4748 IPR004846 Type II/III secretion system Y89_4748 IPR005644 NolW-like Y89_4748 IPR013356 Type II secretion system GspD Y89_4748 IPR038591 Y89_4748 Y89_4749 IPR007690 Type II secretion system, protein M Y89_4750 IPR024230 GspL, cytoplasmic actin-ATPase-like domain Y89_4750 IPR025691 GspL periplasmic domain Y89_4751 IPR005628 General secretion pathway protein K Y89_4751 IPR010994 RuvA domain 2-like Y89_4751 IPR038072 Y89_4751 Y89_4752 IPR000983 Bacterial general secretion pathway protein G-type pilin Y89_4752 IPR010054 General secretion pathway protein G Y89_4752 IPR012902 Prokaryotic N-terminal methylation site Y89_4752 IPR013545 Type II secretion system protein G Y89_4753 IPR003413 Type II secretion system protein I domain Y89_4753 IPR010052 Type II secretion system protein I Y89_4753 IPR012902 Prokaryotic N-terminal methylation site Y89_4754 IPR024961 Y89_4754 Y89_4755 IPR002416 Type II secretion system protein H Y89_4755 IPR012902 Prokaryotic N-terminal methylation site Y89_4755 IPR022346 General secretion pathway, GspH Y89_4756 IPR012902 Prokaryotic N-terminal methylation site Y89_4757 IPR006860 FecR protein Y89_4757 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_4757 IPR032623 Y89_4757 Y89_4758 IPR007627 RNA polymerase sigma-70 region 2 Y89_4758 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_4758 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_4758 IPR013325 RNA polymerase sigma factor, region 2 Y89_4758 IPR014284 RNA polymerase sigma-70 like domain Y89_4758 IPR036388 Y89_4758 Y89_4759 IPR011662 Secretin/TonB, short N-terminal Y89_4761 IPR016053 Haem oxygenase-like Y89_4761 IPR016084 Haem oxygenase-like, multi-helical Y89_4762 IPR017166 Uncharacterised conserved protein UCP037290 Y89_4762 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4763 IPR001126 DNA-repair protein, UmuC-like Y89_4764 IPR003141 Polymerase/histidinol phosphatase, N-terminal Y89_4764 IPR004013 PHP, C-terminal Y89_4764 IPR004805 DNA polymerase III, alpha subunit Y89_4764 IPR011708 Bacterial DNA polymerase III, alpha subunit Y89_4764 IPR016195 Polymerase/histidinol phosphatase-like Y89_4764 IPR023073 DNA polymerase, error-prone Y89_4764 IPR029460 DNA polymerase, helix-hairpin-helix motif Y89_4765 IPR004593 Nuclease SbcCD subunit D Y89_4765 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Y89_4765 IPR026843 Nuclease SbcCD subunit D, C-terminal domain Y89_4765 IPR029052 Metallo-dependent phosphatase-like Y89_4766 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4766 IPR038729 Y89_4766 Y89_4767 IPR006344 Exodeoxyribonuclease V, alpha subunit Y89_4767 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4767 IPR027785 UvrD-like helicase C-terminal domain Y89_4768 IPR004586 Exodeoxyribonuclease V, beta subunit Y89_4768 IPR011335 Restriction endonuclease type II-like Y89_4768 IPR011604 Exonuclease, phage-type/RecB, C-terminal Y89_4768 IPR014017 DNA helicase, UvrD-like, C-terminal Y89_4768 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4768 IPR034739 Y89_4768 Y89_4768 IPR038726 Y89_4768 Y89_4769 IPR006697 Exodeoxyribonuclease V, gamma subunit Y89_4769 IPR011335 Restriction endonuclease type II-like Y89_4769 IPR013986 DExx box DNA helicase domain Y89_4769 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4771 IPR000620 Drug/metabolite transporter Y89_4772 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_4772 IPR009057 Homeodomain-like Y89_4772 IPR011051 RmlC-like cupin domain Y89_4772 IPR014710 RmlC-like jelly roll fold Y89_4772 IPR018060 DNA binding HTH domain, AraC-type Y89_4772 IPR020449 Transcription regulator HTH, AraC- type Y89_4773 IPR003370 Chromate transporter Y89_4773 IPR014047 Chromate transporter, long chain Y89_4774 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_4776 IPR001204 Phosphate transporter Y89_4777 IPR000014 PAS domain Y89_4777 IPR001610 PAC motif Y89_4777 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4777 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4777 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4777 IPR013655 PAS fold-3 Y89_4777 IPR013656 PAS fold-4 Y89_4777 IPR035965 Y89_4777 Y89_4777 IPR036097 Y89_4777 Y89_4777 IPR036890 Y89_4777 Y89_4778 IPR012495 TadE-like Y89_4779 IPR000045 Prepilin type IV endopeptidase, peptidase domain Y89_4780 IPR000792 Transcription regulator LuxR, C-terminal Y89_4780 IPR001789 Signal transduction response regulator, receiver domain Y89_4780 IPR011006 CheY-like superfamily Y89_4780 IPR016032 Signal transduction response regulator, C-terminal effector Y89_4780 IPR036388 Y89_4780 Y89_4781 IPR018705 Domain of unknown function DUF2134, membrane Y89_4782 IPR022053 Protein of unknown function DUF3613 Y89_4783 IPR011990 Tetratricopeptide-like helical domain Y89_4783 IPR016931 Uncharacterised conserved protein UCP029658, TPR Y89_4784 IPR018076 Type II secretion system F domain Y89_4785 IPR018076 Type II secretion system F domain Y89_4786 IPR001482 Type II secretion system protein E Y89_4786 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4787 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4787 IPR031580 Y89_4787 Y89_4788 IPR001775 GspD/PilQ family Y89_4788 IPR004846 Type II/III secretion system Y89_4788 IPR032789 Y89_4788 Y89_4789 IPR013974 SAF domain Y89_4789 IPR017592 Pilus assembly, Flp-type CpaB Y89_4789 IPR031571 Y89_4789 Y89_4790 IPR007047 Flp/Fap pilin component Y89_4791 IPR003660 HAMP linker domain Y89_4791 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_4791 IPR029151 Periplasmic sensor domain-like Y89_4791 IPR033479 Y89_4791 Y89_4792 IPR003593 AAA+ ATPase domain Y89_4792 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4792 IPR033186 Y89_4792 Y89_4793 IPR003660 HAMP linker domain Y89_4793 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_4793 IPR004090 Chemotaxis methyl-accepting receptor Y89_4793 IPR029151 Periplasmic sensor domain-like Y89_4793 IPR033479 Y89_4793 Y89_4794 IPR003660 HAMP linker domain Y89_4794 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_4794 IPR029151 Periplasmic sensor domain-like Y89_4794 IPR033479 Y89_4794 Y89_4795 IPR001296 Glycosyl transferase, family 1 Y89_4795 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Y89_4796 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Y89_4796 IPR018763 Protein of unknown function DUF2334 Y89_4797 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Y89_4799 IPR002376 Formyl transferase, N-terminal Y89_4799 IPR004810 Formyltetrahydrofolate deformylase Y89_4799 IPR036477 Y89_4799 Y89_4801 IPR012337 Ribonuclease H-like domain Y89_4801 IPR013520 Exonuclease, RNase T/DNA polymerase III Y89_4801 IPR013620 Exonuclease C-terminal Y89_4801 IPR023607 Exodeoxyribonuclease I Y89_4801 IPR036397 Y89_4801 Y89_4801 IPR038649 Y89_4801 Y89_4803 IPR010432 RDD Y89_4804 IPR002798 Protein of unknown function DUF95, transmembrane Y89_4805 IPR025403 Domain of unknown function DUF4129 Y89_4806 IPR025646 Domain of unknown function DUF4350 Y89_4807 IPR003593 AAA+ ATPase domain Y89_4807 IPR011703 ATPase, AAA-3 Y89_4807 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4808 IPR002881 Domain of unknown function DUF58 Y89_4808 IPR036465 Y89_4808 Y89_4809 IPR009875 PilZ domain Y89_4810 IPR025392 Domain of unknown function DUF4124 Y89_4811 IPR011990 Tetratricopeptide-like helical domain Y89_4812 IPR019734 Tetratricopeptide repeat Y89_4813 IPR006016 UspA Y89_4814 IPR001697 Pyruvate kinase Y89_4814 IPR011037 Pyruvate kinase-like, insert domain Y89_4814 IPR015793 Pyruvate kinase, barrel Y89_4814 IPR015795 Pyruvate kinase, C-terminal Y89_4814 IPR015806 Pyruvate kinase, beta-barrel insert domain Y89_4814 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_4814 IPR018209 Pyruvate kinase, active site Y89_4814 IPR036918 Y89_4814 Y89_4815 IPR001753 Crotonase superfamily Y89_4815 IPR014748 Crontonase, C-terminal Y89_4815 IPR029045 ClpP/crotonase-like domain Y89_4816 IPR001041 2Fe-2S ferredoxin-type domain Y89_4816 IPR001221 Phenol hydroxylase reductase Y89_4816 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_4816 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Y89_4816 IPR012675 Beta-grasp domain Y89_4816 IPR017938 Riboflavin synthase-like beta-barrel Y89_4816 IPR036010 Y89_4816 Y89_4816 IPR039261 Y89_4816 Y89_4817 IPR000160 GGDEF domain Y89_4817 IPR029787 Nucleotide cyclase Y89_4818 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain Y89_4818 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain Y89_4818 IPR011167 Iron-dependent fumarate hydratase Y89_4818 IPR036660 Y89_4818 Y89_4819 IPR001046 NRAMP family Y89_4820 IPR027373 Ribbon-helix-helix domain Y89_4820 IPR038268 Y89_4820 Y89_4821 IPR002818 ThiJ/PfpI Y89_4821 IPR006286 Peptidase C56, PfpI Y89_4821 IPR029062 Class I glutamine amidotransferase-like Y89_4822 IPR022548 Domain of unknown function DUF2846 Y89_4823 IPR002656 Acyltransferase 3 Y89_4824 IPR001736 Phospholipase D/Transphosphatidylase Y89_4824 IPR025202 Phospholipase D-like domain Y89_4825 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Y89_4825 IPR027016 Uncharacterised protein with YceI domain Y89_4825 IPR036761 Y89_4825 Y89_4826 IPR005471 Transcription regulator IclR, N-terminal Y89_4826 IPR029016 GAF domain-like Y89_4826 IPR036388 Y89_4826 Y89_4826 IPR036390 Y89_4826 Y89_4827 IPR023631 Amidase signature domain Y89_4827 IPR036928 Y89_4827 Y89_4828 IPR005828 General substrate transporter Y89_4828 IPR005829 Sugar transporter, conserved site Y89_4828 IPR011701 Major facilitator superfamily Y89_4828 IPR036259 Y89_4828 Y89_4829 IPR002933 Peptidase M20 Y89_4829 IPR011650 Peptidase M20, dimerisation domain Y89_4829 IPR017439 Amidohydrolase Y89_4829 IPR036264 Y89_4829 Y89_4830 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Y89_4830 IPR027016 Uncharacterised protein with YceI domain Y89_4830 IPR036761 Y89_4830 Y89_4832 IPR001466 Beta-lactamase-related Y89_4832 IPR012338 Beta-lactamase/transpeptidase-like Y89_4833 IPR001279 Beta-lactamase-like Y89_4833 IPR036866 Y89_4833 Y89_4834 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_4835 IPR016181 Acyl-CoA N-acyltransferase Y89_4836 IPR002123 Phospholipid/glycerol acyltransferase Y89_4837 IPR006015 Universal stress protein A Y89_4837 IPR006016 UspA Y89_4837 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_4838 IPR007431 Acyl carrier protein phosphodiesterase Y89_4839 IPR001845 HTH ArsR-type DNA-binding domain Y89_4839 IPR036388 Y89_4839 Y89_4839 IPR036390 Y89_4839 Y89_4840 IPR011701 Major facilitator superfamily Y89_4840 IPR036259 Y89_4840 Y89_4841 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_4841 IPR013785 Aldolase-type TIM barrel Y89_4842 IPR015102 Transcriptional regulator HTH-type, FeoC Y89_4842 IPR036388 Y89_4842 Y89_4842 IPR036390 Y89_4842 Y89_4843 IPR003373 Ferrous iron transport protein B Y89_4843 IPR011640 Ferrous iron transport protein B, C-terminal Y89_4843 IPR011642 Nucleoside recognition Gate Y89_4843 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4843 IPR030389 Y89_4843 Y89_4844 IPR007167 Ferrous iron transporter FeoA domain Y89_4844 IPR008988 Transcriptional repressor, C-terminal Y89_4844 IPR038157 Y89_4844 Y89_4847 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Y89_4847 IPR036291 Y89_4847 Y89_4848 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase Y89_4848 IPR036291 Y89_4848 Y89_4849 IPR000847 Transcription regulator HTH, LysR Y89_4849 IPR005119 LysR, substrate-binding Y89_4849 IPR017685 Transcription regulator ArgP Y89_4849 IPR023490 Chromosome initiation inhibitor Y89_4849 IPR036388 Y89_4849 Y89_4849 IPR036390 Y89_4849 Y89_4850 IPR018717 Domain of unknown function DUF2241 Y89_4850 IPR027795 GATS-like ACT domain Y89_4851 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_4852 IPR001189 Manganese/iron superoxide dismutase Y89_4852 IPR019831 Manganese/iron superoxide dismutase, N-terminal Y89_4852 IPR019832 Manganese/iron superoxide dismutase, C-terminal Y89_4852 IPR019833 Manganese/iron superoxide dismutase, binding site Y89_4852 IPR036314 Y89_4852 Y89_4852 IPR036324 Y89_4852 Y89_4855 IPR018247 EF-Hand 1, calcium-binding site Y89_4855 IPR022170 Mitochondrial ubiquitin ligase activator of NFKB 1 Y89_4856 IPR007156 LemA Y89_4856 IPR023353 LemA-like domain Y89_4857 IPR018976 Y89_4857 Y89_4857 IPR038352 Y89_4857 Y89_4858 IPR010538 Protein of unknown function DUF1111 Y89_4858 IPR036909 Y89_4858 Y89_4859 IPR018976 Y89_4859 Y89_4859 IPR038352 Y89_4859 Y89_4860 IPR008311 Uncharacterised conserved protein UCP028101 Y89_4860 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Y89_4860 IPR015943 WD40/YVTN repeat-like-containing domain Y89_4861 IPR006143 RND efflux pump, membrane fusion protein Y89_4861 IPR032317 Y89_4861 Y89_4862 IPR001036 Acriflavin resistance protein Y89_4862 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_4863 IPR006406 Nicotinate phosphoribosyltransferase Y89_4863 IPR007229 Nicotinate phosphoribosyltransferase family Y89_4863 IPR036068 Y89_4863 Y89_4865 IPR011009 Protein kinase-like domain Y89_4865 IPR027023 Putative lipopolysaccharide kinase InaA Y89_4868 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4868 IPR003660 HAMP linker domain Y89_4868 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4868 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4868 IPR036097 Y89_4868 Y89_4868 IPR036890 Y89_4868 Y89_4869 IPR001789 Signal transduction response regulator, receiver domain Y89_4869 IPR001867 Signal transduction response regulator, C-terminal Y89_4869 IPR011006 CheY-like superfamily Y89_4869 IPR036388 Y89_4869 Y89_4870 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y89_4870 IPR036938 Y89_4870 Y89_4871 IPR003793 Domain of unknown function DUF190 Y89_4871 IPR011322 Nitrogen regulatory PII-like, alpha/beta Y89_4871 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Y89_4872 IPR003691 Putative fluoride ion transporter CrcB Y89_4873 IPR014956 Putative ParB-like nuclease Y89_4873 IPR016932 Uncharacterised conserved protein UCP029669 Y89_4873 IPR036086 Y89_4873 Y89_4874 IPR001844 Chaperonin Cpn60 Y89_4874 IPR002423 Chaperonin Cpn60/TCP-1 Y89_4874 IPR018370 Chaperonin Cpn60, conserved site Y89_4874 IPR027409 GroEL-like apical domain Y89_4874 IPR027410 TCP-1-like chaperonin intermediate domain Y89_4874 IPR027413 GroEL-like equatorial domain Y89_4875 IPR011032 GroES (chaperonin 10)-like Y89_4875 IPR018369 Chaperonin Cpn10, conserved site Y89_4875 IPR020818 Chaperonin Cpn10 Y89_4875 IPR037124 Y89_4875 Y89_4876 IPR007313 FxsA cytoplasmic membrane protein Y89_4877 IPR012349 FMN-binding split barrel Y89_4877 IPR019595 Domain of unknown function DUF2470 Y89_4877 IPR037119 Y89_4877 Y89_4878 IPR002347 Glucose/ribitol dehydrogenase Y89_4878 IPR036291 Y89_4878 Y89_4879 IPR007433 Protein of unknown function DUF481 Y89_4880 IPR007433 Protein of unknown function DUF481 Y89_4881 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding Y89_4881 IPR036217 Y89_4881 Y89_4881 IPR036388 Y89_4881 Y89_4882 IPR024371 Acetyl-coenzyme A transporter 1 Y89_4882 IPR036259 Y89_4882 Y89_4883 IPR006685 Mechanosensitive ion channel MscS Y89_4883 IPR006686 Mechanosensitive ion channel MscS, conserved site Y89_4883 IPR008910 Conserved TM helix Y89_4883 IPR010920 Like-Sm (LSM) domain Y89_4883 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Y89_4883 IPR011066 Mechanosensitive ion channel MscS, C-terminal Y89_4883 IPR023408 Y89_4883 Y89_4884 IPR007551 Protein of unknown function DUF520 Y89_4884 IPR035570 Y89_4884 Y89_4884 IPR035571 Y89_4884 Y89_4884 IPR036183 Y89_4884 Y89_4885 IPR000160 GGDEF domain Y89_4885 IPR001789 Signal transduction response regulator, receiver domain Y89_4885 IPR011006 CheY-like superfamily Y89_4885 IPR029787 Nucleotide cyclase Y89_4886 IPR003710 Ketopantoate reductase ApbA/PanE Y89_4886 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_4886 IPR013328 Dehydrogenase, multihelical Y89_4886 IPR013332 Ketopantoate reductase, N-terminal domain Y89_4886 IPR013752 Ketopantoate reductase, C-terminal domain Y89_4886 IPR036291 Y89_4886 Y89_4887 IPR000014 PAS domain Y89_4887 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4887 IPR003660 HAMP linker domain Y89_4887 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4887 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4887 IPR013656 PAS fold-4 Y89_4887 IPR035965 Y89_4887 Y89_4887 IPR036097 Y89_4887 Y89_4887 IPR036890 Y89_4887 Y89_4888 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like Y89_4888 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type Y89_4888 IPR036451 Y89_4888 Y89_4889 IPR003561 Mutator MutT Y89_4889 IPR013785 Aldolase-type TIM barrel Y89_4889 IPR015797 NUDIX hydrolase domain-like Y89_4889 IPR020084 NUDIX hydrolase, conserved site Y89_4889 IPR020476 NUDIX hydrolase Y89_4889 IPR022998 Thiamin phosphate synthase superfamily Y89_4889 IPR029119 MutY, C-terminal Y89_4889 IPR036206 Y89_4889 Y89_4890 IPR004045 Glutathione S-transferase, N-terminal Y89_4890 IPR036249 Y89_4890 Y89_4890 IPR036282 Y89_4890 Y89_4891 IPR002813 Arginine biosynthesis protein ArgJ Y89_4891 IPR016117 ArgJ-like domain Y89_4892 IPR000185 Protein translocase subunit SecA Y89_4892 IPR004027 SEC-C motif Y89_4892 IPR011115 SecA DEAD-like, N-terminal Y89_4892 IPR011116 SecA Wing/Scaffold Y89_4892 IPR011130 SecA preprotein, cross-linking domain Y89_4892 IPR020937 SecA conserved site Y89_4892 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4892 IPR036266 Y89_4892 Y89_4892 IPR036670 Y89_4892 Y89_4893 IPR011055 Duplicated hybrid motif Y89_4893 IPR016047 Peptidase M23 Y89_4894 IPR007922 Protein of unknown function DUF721/UPF0232 Y89_4895 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase Y89_4895 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal Y89_4895 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal Y89_4895 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_4896 IPR000158 Cell division protein FtsZ Y89_4896 IPR003008 Tubulin/FtsZ, GTPase domain Y89_4896 IPR008280 Tubulin/FtsZ, C-terminal Y89_4896 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Y89_4896 IPR020805 Cell division protein FtsZ, conserved site Y89_4896 IPR024757 Cell division protein FtsZ, C-terminal Y89_4896 IPR036525 Y89_4896 Y89_4897 IPR003494 SHS2 domain inserted in FtsA Y89_4897 IPR020823 Cell division protein FtsA Y89_4898 IPR005548 Cell division protein FtsQ/DivIB Y89_4898 IPR013685 Polypeptide-transport-associated, FtsQ-type Y89_4898 IPR026579 Cell division protein FtsQ Y89_4899 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site Y89_4899 IPR005905 D-alanine--D-alanine ligase Y89_4899 IPR011095 D-alanine--D-alanine ligase, C-terminal Y89_4899 IPR011127 D-alanine--D-alanine ligase, N-terminal domain Y89_4899 IPR013815 ATP-grasp fold, subdomain 1 Y89_4899 IPR016185 Pre-ATP-grasp domain Y89_4900 IPR000713 Mur ligase, N-terminal Y89_4900 IPR004101 Mur ligase, C-terminal Y89_4900 IPR005758 UDP-N-acetylmuramate-alanine ligase Y89_4900 IPR013221 Mur ligase, central Y89_4900 IPR036565 Y89_4900 Y89_4900 IPR036615 Y89_4900 Y89_4901 IPR004276 Glycosyl transferase, family 28 Y89_4901 IPR006009 N-acetylglucosaminyltransferase, MurG Y89_4901 IPR007235 Glycosyl transferase, family 28, C-terminal Y89_4902 IPR001182 Cell cycle protein FtsW/RodA Y89_4902 IPR013437 Cell division protein FtsW Y89_4902 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Y89_4903 IPR004101 Mur ligase, C-terminal Y89_4903 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase Y89_4903 IPR013221 Mur ligase, central Y89_4903 IPR036565 Y89_4903 Y89_4903 IPR036615 Y89_4903 Y89_4904 IPR000715 Glycosyl transferase, family 4 Y89_4904 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase Y89_4904 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site Y89_4905 IPR000713 Mur ligase, N-terminal Y89_4905 IPR004101 Mur ligase, C-terminal Y89_4905 IPR005863 UDP-MurNAc-pentapeptide synthetase Y89_4905 IPR013221 Mur ligase, central Y89_4905 IPR035911 Y89_4905 Y89_4905 IPR036565 Y89_4905 Y89_4905 IPR036615 Y89_4905 Y89_4906 IPR000713 Mur ligase, N-terminal Y89_4906 IPR004101 Mur ligase, C-terminal Y89_4906 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase Y89_4906 IPR013221 Mur ligase, central Y89_4906 IPR035911 Y89_4906 Y89_4906 IPR036565 Y89_4906 Y89_4906 IPR036615 Y89_4906 Y89_4907 IPR001460 Penicillin-binding protein, transpeptidase Y89_4907 IPR005311 Penicillin-binding protein, dimerisation domain Y89_4907 IPR012338 Beta-lactamase/transpeptidase-like Y89_4907 IPR036138 Y89_4907 Y89_4907 IPR037532 Y89_4907 Y89_4908 IPR011922 Cell division protein FtsL Y89_4909 IPR002903 Ribosomal RNA small subunit methyltransferase H Y89_4909 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain Y89_4909 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_4910 IPR003444 MraZ Y89_4910 IPR020603 MraZ domain Y89_4910 IPR037914 Y89_4910 Y89_4910 IPR038619 Y89_4910 Y89_4911 IPR000878 Tetrapyrrole methylase Y89_4911 IPR008189 rRNA small subunit methyltransferase I Y89_4911 IPR014776 Tetrapyrrole methylase, subdomain 2 Y89_4911 IPR014777 Tetrapyrrole methylase, subdomain 1 Y89_4911 IPR018063 SAM-dependent methyltransferase RsmI, conserved site Y89_4911 IPR035996 Y89_4911 Y89_4912 IPR007443 Penicillin-binding protein activator LpoA Y89_4912 IPR028082 Periplasmic binding protein-like I Y89_4914 IPR001347 Sugar isomerase (SIS) Y89_4914 IPR004515 Phosphoheptose isomerase Y89_4915 IPR007055 BON domain Y89_4915 IPR014004 Transport-associated and nodulation domain, bacteria Y89_4916 IPR007481 Stringent starvation protein B Y89_4916 IPR036760 Y89_4916 Y89_4917 IPR004045 Glutathione S-transferase, N-terminal Y89_4917 IPR004046 Glutathione S-transferase, C-terminal Y89_4917 IPR036249 Y89_4917 Y89_4917 IPR036282 Y89_4917 Y89_4918 IPR002326 Cytochrome c1 Y89_4918 IPR036909 Y89_4918 Y89_4919 IPR005797 Cytochrome b/b6, N-terminal Y89_4919 IPR005798 Cytochrome b/b6, C-terminal Y89_4919 IPR016174 Di-haem cytochrome, transmembrane Y89_4919 IPR027387 Cytochrome b/b6-like domain Y89_4919 IPR030689 Y89_4919 Y89_4919 IPR036150 Y89_4919 Y89_4920 IPR005805 Rieske iron-sulphur protein, C-terminal Y89_4920 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit Y89_4920 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Y89_4920 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal Y89_4920 IPR036922 Y89_4920 Y89_4921 IPR000754 Ribosomal protein S9 Y89_4921 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_4921 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_4921 IPR020574 Ribosomal protein S9, conserved site Y89_4921 IPR023035 Ribosomal protein S9, bacterial/plastid Y89_4922 IPR005822 Ribosomal protein L13 Y89_4922 IPR005823 Ribosomal protein L13, bacterial-type Y89_4922 IPR023563 Ribosomal protein L13, conserved site Y89_4922 IPR036899 Y89_4922 Y89_4923 IPR020471 Aldo/keto reductase subgroup Y89_4923 IPR023210 NADP-dependent oxidoreductase domain Y89_4923 IPR036812 Y89_4923 Y89_4924 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_4924 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_4924 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_4924 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_4924 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_4924 IPR036250 Y89_4924 Y89_4924 IPR037069 Y89_4924 Y89_4925 IPR009057 Homeodomain-like Y89_4925 IPR018060 DNA binding HTH domain, AraC-type Y89_4925 IPR018062 HTH domain AraC-type, conserved site Y89_4925 IPR029062 Class I glutamine amidotransferase-like Y89_4927 IPR005654 ATPase, AFG1-like Y89_4927 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4927 IPR030870 Y89_4927 Y89_4928 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Y89_4928 IPR002305 Aminoacyl-tRNA synthetase, class Ic Y89_4928 IPR002306 Tryptophan-tRNA ligase Y89_4928 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_4928 IPR024109 Tryptophan-tRNA ligase, bacterial-type Y89_4928 IPR036913 Y89_4928 Y89_4929 IPR001031 Thioesterase Y89_4929 IPR029058 Alpha/Beta hydrolase fold Y89_4930 IPR009386 Protein of unknown function DUF1043 Y89_4931 IPR000795 Elongation factor, GTP-binding domain Y89_4931 IPR002891 Adenylylsulphate kinase Y89_4931 IPR005225 Small GTP-binding protein domain Y89_4931 IPR009000 Translation protein, beta-barrel domain Y89_4931 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Y89_4931 IPR011779 Sulphate adenylyltransferase, large subunit Y89_4931 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4931 IPR031157 Y89_4931 Y89_4932 IPR002500 Phosphoadenosine phosphosulphate reductase Y89_4932 IPR011784 Sulphate adenylyltransferase, small subunit Y89_4932 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_4933 IPR011757 Lytic transglycosylase MltB Y89_4933 IPR023346 Lysozyme-like domain Y89_4933 IPR031304 Y89_4933 Y89_4934 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Y89_4934 IPR036069 Y89_4934 Y89_4935 IPR001478 PDZ domain Y89_4935 IPR001940 Peptidase S1C Y89_4935 IPR009003 Trypsin-like cysteine/serine peptidase domain Y89_4935 IPR036034 Y89_4935 Y89_4936 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Y89_4936 IPR004839 Aminotransferase, class I/classII Y89_4936 IPR005861 Histidinol-phosphate aminotransferase family Y89_4936 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_4936 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_4936 IPR015424 Pyridoxal phosphate-dependent transferase Y89_4937 IPR001692 Histidinol dehydrogenase, conserved site Y89_4937 IPR012131 Histidinol dehydrogenase Y89_4937 IPR016161 Aldehyde/histidinol dehydrogenase Y89_4937 IPR022695 Histidinol dehydrogenase, monofunctional Y89_4938 IPR013820 ATP phosphoribosyltransferase, catalytic domain Y89_4938 IPR018198 ATP phosphoribosyltransferase, conserved site Y89_4938 IPR024893 ATP phosphoribosyltransferase HisG, short form Y89_4939 IPR001986 Enolpyruvate transferase domain Y89_4939 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Y89_4939 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Y89_4939 IPR036968 Y89_4939 Y89_4940 IPR002634 BolA protein Y89_4940 IPR036065 Y89_4940 Y89_4941 IPR002645 STAS domain Y89_4941 IPR036513 Y89_4941 Y89_4942 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Y89_4943 IPR003399 Mammalian cell entry-related Y89_4943 IPR030970 Y89_4943 Y89_4944 IPR003453 Permease domain Y89_4944 IPR030802 Y89_4944 Y89_4945 IPR003439 ABC transporter-like Y89_4945 IPR003593 AAA+ ATPase domain Y89_4945 IPR017871 ABC transporter, conserved site Y89_4945 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4947 IPR000644 CBS domain Y89_4947 IPR001347 Sugar isomerase (SIS) Y89_4947 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type Y89_4948 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Y89_4948 IPR023214 HAD-like domain Y89_4948 IPR036412 Y89_4948 Y89_4949 IPR010664 Lipopolysaccharide assembly, LptC-related Y89_4949 IPR026265 Lipopolysaccharide export system protein LptC Y89_4950 IPR005653 Organic solvent tolerance-like, N-terminal Y89_4950 IPR014340 Lipopolysaccharide assembly, LptA Y89_4951 IPR003439 ABC transporter-like Y89_4951 IPR003593 AAA+ ATPase domain Y89_4951 IPR017871 ABC transporter, conserved site Y89_4951 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4951 IPR030921 Y89_4951 Y89_4951 IPR032823 Y89_4951 Y89_4952 IPR000394 RNA polymerase sigma factor 54 Y89_4952 IPR007046 RNA polymerase sigma factor 54, core-binding Y89_4952 IPR007634 RNA polymerase sigma factor 54, DNA-binding Y89_4952 IPR038709 Y89_4952 Y89_4953 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein Y89_4953 IPR036567 Y89_4953 Y89_4954 IPR002178 PTS EIIA type-2 domain Y89_4954 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN Y89_4954 IPR016152 Phosphotransferase/anion transporter Y89_4955 IPR005337 ATPase, P-loop-containing Y89_4955 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4956 IPR000032 Phosphocarrier HPr protein-like Y89_4956 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Y89_4956 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Y89_4956 IPR035895 Y89_4956 Y89_4957 IPR003689 Zinc/iron permease Y89_4958 IPR001189 Manganese/iron superoxide dismutase Y89_4958 IPR019831 Manganese/iron superoxide dismutase, N-terminal Y89_4958 IPR019832 Manganese/iron superoxide dismutase, C-terminal Y89_4958 IPR019833 Manganese/iron superoxide dismutase, binding site Y89_4958 IPR036314 Y89_4958 Y89_4958 IPR036324 Y89_4958 Y89_4960 IPR000362 Fumarate lyase family Y89_4960 IPR005677 Fumarate hydratase, class II Y89_4960 IPR008948 L-Aspartase-like Y89_4960 IPR018951 Fumarase C, C-terminal Y89_4960 IPR020557 Fumarate lyase, conserved site Y89_4960 IPR022761 Fumarate lyase, N-terminal Y89_4960 IPR024083 Fumarase/histidase, N-terminal Y89_4962 IPR002510 TldD/PmbA Y89_4962 IPR035068 Y89_4962 Y89_4962 IPR036059 Y89_4962 Y89_4963 IPR006839 Ribosome-associated, YjgA Y89_4963 IPR023153 PSPTO4464-like domain Y89_4964 IPR002510 TldD/PmbA Y89_4964 IPR025502 TldD Y89_4964 IPR035068 Y89_4964 Y89_4964 IPR036059 Y89_4964 Y89_4965 IPR001110 Uncharacterised protein family UPF0012, conserved site Y89_4965 IPR003010 Carbon-nitrogen hydrolase Y89_4965 IPR036526 Y89_4965 Y89_4966 IPR011836 Conserved hypothetical protein CHP02099 Y89_4966 IPR025263 Domain of unknown function DUF3971 Y89_4966 IPR032712 Y89_4966 Y89_4967 IPR003029 Ribosomal protein S1, RNA-binding domain Y89_4967 IPR004659 Ribonuclease E/G Y89_4967 IPR012340 Nucleic acid-binding, OB-fold Y89_4967 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G Y89_4967 IPR022967 RNA-binding domain, S1 Y89_4968 IPR003697 Maf-like protein Y89_4968 IPR029001 Inosine triphosphate pyrophosphatase-like Y89_4969 IPR007227 Cell shape-determining protein MreD Y89_4969 IPR026034 Cell shape-determining protein MreD, proteobacterial type Y89_4970 IPR007221 Rod shape-determining protein MreC Y89_4971 IPR004753 Cell shape determining protein MreB/Mrl Y89_4972 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit Y89_4972 IPR036113 Y89_4972 Y89_4973 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Y89_4973 IPR020556 Amidase, conserved site Y89_4973 IPR023631 Amidase signature domain Y89_4973 IPR036928 Y89_4973 Y89_4974 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related Y89_4974 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit Y89_4974 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic Y89_4974 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_4974 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site Y89_4974 IPR018027 Asn/Gln amidotransferase Y89_4974 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Y89_4975 IPR009009 RlpA-like double-psi beta-barrel domain Y89_4975 IPR012997 Rare lipoprotein A, bacterial Y89_4975 IPR034718 Y89_4975 Y89_4975 IPR036908 Y89_4975 Y89_4976 IPR003779 Carboxymuconolactone decarboxylase-like Y89_4976 IPR029032 AhpD-like Y89_4977 IPR012039 Uncharacterised conserved protein UCP012281 Y89_4977 IPR019220 Domain of unknown function DUF2135 Y89_4978 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Y89_4978 IPR018748 Domain of unknown function DUF2300, secreted Y89_4979 IPR001599 Alpha-2-macroglobulin Y89_4979 IPR002890 Alpha-2-macroglobulin, N-terminal Y89_4979 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Y89_4979 IPR011625 Alpha-2-macroglobulin, N-terminal 2 Y89_4979 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming Y89_4980 IPR009558 Protein of unknown function DUF1175 Y89_4981 IPR018671 Protein of unknown function DUF2138 Y89_4982 IPR012039 Uncharacterised conserved protein UCP012281 Y89_4982 IPR019220 Domain of unknown function DUF2135 Y89_4983 IPR001789 Signal transduction response regulator, receiver domain Y89_4983 IPR002197 DNA binding HTH domain, Fis-type Y89_4983 IPR011006 CheY-like superfamily Y89_4984 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_4984 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_4984 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_4984 IPR036097 Y89_4984 Y89_4984 IPR036890 Y89_4984 Y89_4985 IPR007497 Protein of unknown function DUF541 Y89_4986 IPR000914 Bacterial extracellular solute-binding protein, family 5 Y89_4986 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site Y89_4986 IPR030678 Y89_4986 Y89_4987 IPR005318 Outer membrane porin, bacterial Y89_4987 IPR023614 Porin domain Y89_4988 IPR000914 Bacterial extracellular solute-binding protein, family 5 Y89_4988 IPR030678 Y89_4988 Y89_4989 IPR000515 MetI-like domain Y89_4989 IPR035906 Y89_4989 Y89_4990 IPR000515 MetI-like domain Y89_4990 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Y89_4990 IPR035906 Y89_4990 Y89_4991 IPR003439 ABC transporter-like Y89_4991 IPR003593 AAA+ ATPase domain Y89_4991 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Y89_4991 IPR017871 ABC transporter, conserved site Y89_4991 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4992 IPR003439 ABC transporter-like Y89_4992 IPR003593 AAA+ ATPase domain Y89_4992 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Y89_4992 IPR017871 ABC transporter, conserved site Y89_4992 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_4993 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_4994 IPR000485 AsnC-type HTH domain Y89_4994 IPR011008 Dimeric alpha-beta barrel Y89_4994 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Y89_4994 IPR019887 Transcription regulator AsnC-type, C-terminal Y89_4994 IPR019888 Transcription regulator AsnC-type Y89_4994 IPR036388 Y89_4994 Y89_4994 IPR036390 Y89_4994 Y89_4995 IPR003778 Allophanate hydrolase subunit 2 Y89_4995 IPR029000 Cyclophilin-like domain Y89_4996 IPR003833 Allophanate hydrolase subunit 1 Y89_4996 IPR010016 Sensor histidine kinase inhibitor, KipI family Y89_4996 IPR029000 Cyclophilin-like domain Y89_4997 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF Y89_4997 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Y89_4998 IPR007803 Arginine/Asparagine/Proline hydroxylase Y89_4998 IPR027443 Isopenicillin N synthase-like Y89_4999 IPR001094 Flavodoxin Y89_4999 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_4999 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Y89_4999 IPR005625 PepSY-associated TM helix Y89_4999 IPR008254 Flavodoxin/nitric oxide synthase Y89_4999 IPR017938 Riboflavin synthase-like beta-barrel Y89_4999 IPR029039 Flavoprotein-like Y89_4999 IPR039261 Y89_4999 Y89_5000 IPR000531 TonB-dependent receptor, beta-barrel Y89_5000 IPR010105 TonB-dependent siderophore receptor Y89_5000 IPR012910 TonB-dependent receptor, plug Y89_5000 IPR036942 Y89_5000 Y89_5000 IPR037066 Y89_5000 Y89_5001 IPR005123 Oxoglutarate/iron-dependent dioxygenase Y89_5001 IPR006620 Prolyl 4-hydroxylase, alpha subunit Y89_5001 IPR023550 PKHD-type hydroxylase Y89_5002 IPR006597 Sel1-like Y89_5002 IPR011990 Tetratricopeptide-like helical domain Y89_5003 IPR000917 Sulfatase Y89_5003 IPR012549 Domain of unknown function DUF1705 Y89_5003 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_5003 IPR017850 Alkaline-phosphatase-like, core domain Y89_5004 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_5004 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_5005 IPR000183 Ornithine/DAP/Arg decarboxylase Y89_5005 IPR002433 Ornithine decarboxylase Y89_5005 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Y89_5005 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal Y89_5005 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Y89_5005 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Y89_5005 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Y89_5005 IPR029066 PLP-binding barrel Y89_5006 IPR003660 HAMP linker domain Y89_5006 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_5008 IPR002502 N-acetylmuramoyl-L-alanine amidase domain Y89_5008 IPR036505 Y89_5008 Y89_5009 IPR012434 Protein of unknown function DUF1631 Y89_5010 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal Y89_5010 IPR004393 Nicotinate-nucleotide pyrophosphorylase Y89_5010 IPR013785 Aldolase-type TIM barrel Y89_5010 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal Y89_5010 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Y89_5010 IPR036068 Y89_5010 Y89_5010 IPR037128 Y89_5010 Y89_5011 IPR002104 Integrase, catalytic Y89_5011 IPR010998 Integrase, Lambda-type, N-terminal Y89_5011 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_5011 IPR013762 Integrase-like, catalytic core Y89_5011 IPR025166 Domain of unknown function DUF4102 Y89_5011 IPR038488 Y89_5011 Y89_5019 IPR036977 Y89_5019 Y89_5020 IPR022081 Domain of unknown function DUF3631 Y89_5023 IPR002125 CMP/dCMP deaminase, zinc-binding Y89_5023 IPR016192 APOBEC/CMP deaminase, zinc-binding Y89_5023 IPR016193 Cytidine deaminase-like Y89_5024 IPR000182 GNAT domain Y89_5024 IPR016181 Acyl-CoA N-acyltransferase Y89_5029 IPR023346 Lysozyme-like domain Y89_5029 IPR031922 Y89_5029 Y89_5030 IPR021593 Protein of unknown function DUF3218 Y89_5030 IPR023346 Lysozyme-like domain Y89_5030 IPR038265 Y89_5030 Y89_5032 IPR005837 Flagellar transport protein FliP Y89_5032 IPR005838 Type III secretion system inner membrane P protein Y89_5033 IPR002191 Bacterial export protein family 3 Y89_5033 IPR006305 Flagellar biosynthesis protein FliQ Y89_5034 IPR002010 Type III secretion system inner membrane R protein Y89_5034 IPR006303 Flagellar biosynthesis protein FliR Y89_5035 IPR006135 Type III secretion system substrate exporter Y89_5037 IPR001482 Type II secretion system protein E Y89_5037 IPR007831 General secretory system II, protein E, N-terminal Y89_5037 IPR013374 ATPase, type IV, pilus assembly, PilB Y89_5037 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5037 IPR037257 Y89_5037 Y89_5038 IPR001992 Type II secretion system conserved site Y89_5038 IPR003004 GspF/PilC family Y89_5038 IPR018076 Type II secretion system F domain Y89_5039 IPR000045 Prepilin type IV endopeptidase, peptidase domain Y89_5039 IPR010627 Peptidase A24A, N-terminal Y89_5039 IPR014032 Peptidase A24A, prepilin type IV, bacterial Y89_5040 IPR001977 Dephospho-CoA kinase Y89_5040 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5041 IPR005584 DNA gyrase inhibitor YacG Y89_5041 IPR013088 Zinc finger, NHR/GATA-type Y89_5043 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family Y89_5045 IPR000182 GNAT domain Y89_5045 IPR016181 Acyl-CoA N-acyltransferase Y89_5046 IPR011335 Restriction endonuclease type II-like Y89_5046 IPR014796 Protein of unknown function DUF1780 Y89_5046 IPR037074 Y89_5046 Y89_5048 IPR021444 Protein of unknown function DUF3094 Y89_5049 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_5049 IPR036188 Y89_5049 Y89_5050 IPR005654 ATPase, AFG1-like Y89_5050 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5051 IPR005565 Haemolysin activator HlyB Y89_5051 IPR013686 Polypeptide-transport-associated, ShlB-type Y89_5052 IPR008638 Filamentous haemagglutinin, N-terminal Y89_5052 IPR011050 Pectin lyase fold/virulence factor Y89_5052 IPR011493 GLUG Y89_5052 IPR012334 Pectin lyase fold Y89_5052 IPR024973 ESPR domain Y89_5053 IPR025669 AAA domain Y89_5053 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5057 IPR016868 Bacteriophage B3, Orf5 Y89_5057 IPR024498 Domain of unknown function DUF2786 Y89_5058 IPR003615 HNH nuclease Y89_5060 IPR007692 DNA helicase, DnaB type Y89_5060 IPR007693 DNA helicase, DnaB-like, N-terminal Y89_5060 IPR007694 DNA helicase, DnaB-like, C-terminal Y89_5060 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Y89_5060 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5060 IPR036185 Y89_5060 Y89_5068 IPR007358 Nucleoid-associated protein NdpA Y89_5069 IPR012263 Adenine modification methylase, M.EcoRV-type Y89_5069 IPR012327 D12 class N6 adenine-specific DNA methyltransferase Y89_5069 IPR023095 Adenine-specific methyltransferase, domain 2 Y89_5069 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5070 IPR005569 Arc-like DNA binding Y89_5070 IPR010985 Ribbon-helix-helix Y89_5070 IPR013321 Arc-type ribbon-helix-helix Y89_5071 IPR003115 ParB/Sulfiredoxin Y89_5071 IPR022304 Integrating conjugative element, PFGI-1, ParB Y89_5071 IPR036086 Y89_5071 Y89_5072 IPR021364 Protein of unknown function DUF2857 Y89_5075 IPR014996 Integrating conjugative element protein, PFL4669 Y89_5076 IPR021502 Protein of unknown function DUF3158 Y89_5077 IPR014054 Bacteriophage regulatory protein, Rha family Y89_5078 IPR000424 Primosome PriB/single-strand DNA-binding Y89_5078 IPR011344 Single-stranded DNA-binding protein Y89_5078 IPR012340 Nucleic acid-binding, OB-fold Y89_5079 IPR003601 DNA topoisomerase, type IA, domain 2 Y89_5079 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Y89_5079 IPR005733 DNA topoisomerase I, bacterial-type Y89_5079 IPR006171 Toprim domain Y89_5079 IPR013497 DNA topoisomerase, type IA, central Y89_5079 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Y89_5079 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Y89_5079 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Y89_5079 IPR023405 DNA topoisomerase, type IA, core domain Y89_5079 IPR023406 DNA topoisomerase, type IA, active site Y89_5079 IPR028612 DNA topoisomerase I, type IA Y89_5082 IPR000330 SNF2-related Y89_5082 IPR001650 Helicase, C-terminal Y89_5082 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_5082 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5082 IPR038718 Y89_5082 Y89_5083 IPR001387 Cro/C1-type helix-turn-helix domain Y89_5083 IPR010982 Lambda repressor-like, DNA-binding domain Y89_5083 IPR014057 Addiction module antidote protein, HI1420 Y89_5084 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal Y89_5084 IPR022260 Integrating conjugative element protein PilL, PFGI-1 Y89_5085 IPR004846 Type II/III secretion system Y89_5085 IPR011514 Secretin, N-terminal Y89_5085 IPR013359 Pilus formation type IVB, outer membrane PilN Y89_5086 IPR009663 Pilin accessory predicted Y89_5087 IPR022753 Type IV pilus biogenesis PilP Y89_5088 IPR001482 Type II secretion system protein E Y89_5088 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5089 IPR018076 Type II secretion system F domain Y89_5090 IPR014911 Type 4 secretion system, PilS, N-terminal Y89_5091 IPR001482 Type II secretion system protein E Y89_5091 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5092 IPR007001 Bacterial shufflon protein, N-terminal Y89_5093 IPR009987 PilM, inner membrane Y89_5096 IPR021960 Protein of unknown function DUF3577 Y89_5101 IPR021693 Protein of unknown function DUF3275 Y89_5106 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Y89_5106 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5107 IPR001650 Helicase, C-terminal Y89_5107 IPR006935 Helicase/UvrB domain Y89_5107 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_5107 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5107 IPR038718 Y89_5107 Y89_5108 IPR009003 Trypsin-like cysteine/serine peptidase domain Y89_5108 IPR018114 Peptidase S1, trypsin family, active site Y89_5110 IPR022293 Integrating conjugative element protein, PFL4693 Y89_5111 IPR023346 Lysozyme-like domain Y89_5112 IPR021300 Integrating conjugative element protein, PFL4695 Y89_5114 IPR022458 Conjugative coupling factor TraG/TraD Y89_5114 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 Y89_5114 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5114 IPR032689 Y89_5114 Y89_5115 IPR022266 Integrating conjugative element protein, PFL4697-type Y89_5116 IPR014017 DNA helicase, UvrD-like, C-terminal Y89_5116 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5119 IPR019110 Uncharacterised protein family, RAQPRD Y89_5120 IPR021676 Protein of unknown function DUF3262 Y89_5121 IPR021356 Integrating conjugative element protein PFL4702 Y89_5122 IPR021877 Protein of unknown function DUF3487 Y89_5123 IPR021548 Protein of unknown function DUF2895 Y89_5124 IPR021844 Integrating conjugative element protein, PFL4704 Y89_5125 IPR021207 Integrating conjugative element protein, PFL4705 Y89_5126 IPR022262 Lipoprotein, putative Y89_5127 IPR022303 Conjugative transfer ATPase Y89_5127 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase Y89_5127 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5129 IPR012336 Thioredoxin-like fold Y89_5129 IPR036249 Y89_5129 Y89_5133 IPR009649 TraU Y89_5133 IPR026331 Integrating conjugative element protein PFL_4710 Y89_5134 IPR021204 Integrating conjugative element protein, PFL4711 Y89_5136 IPR012931 TraG-like, N-terminal Y89_5138 IPR010985 Ribbon-helix-helix Y89_5138 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor Y89_5138 IPR038296 Y89_5138 Y89_5139 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Y89_5139 IPR035093 Y89_5139 Y89_5142 IPR002514 Transposase IS3/IS911family Y89_5142 IPR009057 Homeodomain-like Y89_5143 IPR008878 Transposase IS66, Orf2 Y89_5144 IPR004291 Transposase, IS66 Y89_5144 IPR024463 Transposase TnpC, homeodomain Y89_5144 IPR024474 Zinc-finger binding domain of transposase IS66 Y89_5144 IPR039552 Y89_5144 Y89_5146 IPR011093 Domain of unknown function DUF1528, C-terminal Y89_5146 IPR011119 Uncharacterised domain, helicase/relaxase, putative Y89_5146 IPR022391 Integrating conjugative element relaxase, PFGI-1 class Y89_5146 IPR036388 Y89_5146 Y89_5146 IPR036390 Y89_5146 Y89_5147 IPR002104 Integrase, catalytic Y89_5147 IPR004107 Integrase, SAM-like, N-terminal Y89_5147 IPR010998 Integrase, Lambda-type, N-terminal Y89_5147 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_5147 IPR013762 Integrase-like, catalytic core Y89_5148 IPR001270 ClpA/B family Y89_5148 IPR003593 AAA+ ATPase domain Y89_5148 IPR003959 ATPase, AAA-type, core Y89_5148 IPR004176 Clp, N-terminal Y89_5148 IPR017730 Chaperonin ClpB Y89_5148 IPR018368 ClpA/B, conserved site 1 Y89_5148 IPR019489 Clp ATPase, C-terminal Y89_5148 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5148 IPR028299 ClpA/B, conserved site 2 Y89_5148 IPR036628 Y89_5148 Y89_5149 IPR003730 Multi-copper polyphenol oxidoreductase, laccase Y89_5149 IPR011324 Cytotoxic necrotizing factor-like, catalytic Y89_5149 IPR038371 Y89_5149 Y89_5150 IPR002942 RNA-binding S4 domain Y89_5150 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Y89_5150 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Y89_5150 IPR006225 Pseudouridine synthase, RluC/RluD Y89_5150 IPR020103 Pseudouridine synthase, catalytic domain Y89_5150 IPR036986 Y89_5150 Y89_5151 IPR011990 Tetratricopeptide-like helical domain Y89_5151 IPR017689 Outer membrane protein assembly factor BamD Y89_5151 IPR039565 Y89_5151 Y89_5153 IPR000014 PAS domain Y89_5153 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_5153 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_5153 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_5153 IPR036097 Y89_5153 Y89_5153 IPR036890 Y89_5153 Y89_5154 IPR001789 Signal transduction response regulator, receiver domain Y89_5154 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_5154 IPR002197 DNA binding HTH domain, Fis-type Y89_5154 IPR003593 AAA+ ATPase domain Y89_5154 IPR009057 Homeodomain-like Y89_5154 IPR011006 CheY-like superfamily Y89_5154 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_5154 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_5154 IPR025944 Sigma-54 interaction domain, conserved site Y89_5154 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5155 IPR006076 FAD dependent oxidoreductase Y89_5155 IPR012727 Glycine oxidase ThiO Y89_5155 IPR036188 Y89_5155 Y89_5156 IPR012902 Prokaryotic N-terminal methylation site Y89_5156 IPR022346 General secretion pathway, GspH Y89_5157 IPR012902 Prokaryotic N-terminal methylation site Y89_5157 IPR022346 General secretion pathway, GspH Y89_5158 IPR012902 Prokaryotic N-terminal methylation site Y89_5158 IPR013362 Pilus modification type IV, PilV Y89_5159 IPR012902 Prokaryotic N-terminal methylation site Y89_5160 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain Y89_5161 IPR008707 PilC beta-propeller domain Y89_5161 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily Y89_5162 IPR029497 Type 4 fimbrial biogenesis protein PilY2 Y89_5163 IPR012902 Prokaryotic N-terminal methylation site Y89_5163 IPR031982 Y89_5163 Y89_5164 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Y89_5165 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain Y89_5166 IPR001872 Peptidase A8, signal peptidase II Y89_5167 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Y89_5167 IPR002300 Aminoacyl-tRNA synthetase, class Ia Y89_5167 IPR002301 Isoleucine-tRNA ligase Y89_5167 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Y89_5167 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Y89_5167 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase Y89_5167 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Y89_5167 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5167 IPR023585 Isoleucine-tRNA ligase, type 1 Y89_5168 IPR002606 Riboflavin kinase, bacterial Y89_5168 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5168 IPR015864 FAD synthetase Y89_5168 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic Y89_5168 IPR023465 Riboflavin kinase domain Y89_5169 IPR004268 Flagellin assembly, membrane protein MviN Y89_5170 IPR002583 Ribosomal protein S20 Y89_5170 IPR036510 Y89_5170 Y89_5171 IPR010292 Uncharacterised protein family CreA Y89_5172 IPR001048 Aspartate/glutamate/uridylate kinase Y89_5172 IPR001057 Glutamate/acetylglutamate kinase Y89_5172 IPR002478 PUA domain Y89_5172 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase Y89_5172 IPR011529 Glutamate 5-kinase Y89_5172 IPR015947 PUA-like domain Y89_5172 IPR019797 Glutamate 5-kinase, conserved site Y89_5172 IPR036393 Y89_5172 Y89_5172 IPR036974 Y89_5172 Y89_5173 IPR006073 GTP binding domain Y89_5173 IPR006074 GTP1/OBG, conserved site Y89_5173 IPR006169 GTP1/OBG domain Y89_5173 IPR014100 GTP-binding protein Obg/CgtA Y89_5173 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5173 IPR035101 Y89_5173 Y89_5173 IPR036726 Y89_5173 Y89_5174 IPR001684 Ribosomal protein L27 Y89_5174 IPR018261 Ribosomal protein L27, conserved site Y89_5175 IPR001787 Ribosomal protein L21 Y89_5175 IPR018258 Ribosomal protein L21, conserved site Y89_5175 IPR028909 Ribosomal protein L21-like Y89_5175 IPR036164 Y89_5175 Y89_5176 IPR000092 Polyprenyl synthetase Y89_5176 IPR008949 Terpenoid synthase Y89_5176 IPR033749 Y89_5176 Y89_5178 IPR009056 Cytochrome c-like domain Y89_5178 IPR036909 Y89_5178 Y89_5179 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal Y89_5179 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain Y89_5179 IPR036944 Y89_5179 Y89_5181 IPR005134 Uncharacterised protein family UPF0114 Y89_5181 IPR020761 Uncharacterised protein family UPF0114, bacteria Y89_5183 IPR008269 Peptidase S16, Lon C-terminal Y89_5183 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_5183 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_5183 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5184 IPR000962 Zinc finger, DksA/TraR C4-type Y89_5184 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Y89_5185 IPR021383 Protein of unknown function DUF3015 Y89_5186 IPR025178 Domain of unknown function DUF4105 Y89_5187 IPR012816 Conserved hypothetical protein CHP02464 Y89_5187 IPR037238 Y89_5187 Y89_5188 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_5188 IPR003593 AAA+ ATPase domain Y89_5188 IPR009715 Regulator of RNA terminal phosphate cyclase Y89_5188 IPR017183 Sigma54-dependent transcriptional activator, RtcR Y89_5188 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_5188 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5189 IPR001107 Band 7 protein Y89_5189 IPR001972 Stomatin family Y89_5189 IPR036013 Y89_5189 Y89_5190 IPR001233 tRNA-splicing ligase, RtcB Y89_5190 IPR036025 Y89_5190 Y89_5191 IPR018775 Nucleotidyltransferase, predicted Y89_5192 IPR000228 RNA 3'-terminal phosphate cyclase Y89_5192 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain Y89_5192 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Y89_5192 IPR017770 RNA 3'-terminal phosphate cyclase type 1 Y89_5192 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site Y89_5192 IPR023797 RNA 3'-terminal phosphate cyclase domain Y89_5192 IPR036553 Y89_5192 Y89_5192 IPR037136 Y89_5192 Y89_5194 IPR004852 Di-haem cytochrome c peroxidase Y89_5194 IPR009056 Cytochrome c-like domain Y89_5194 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase Y89_5194 IPR036909 Y89_5194 Y89_5195 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase Y89_5195 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal Y89_5195 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain Y89_5195 IPR014362 Glutamate dehydrogenase Y89_5195 IPR033524 Y89_5195 Y89_5195 IPR036291 Y89_5195 Y89_5196 IPR005017 Membrane protein, aromatic hydrocarbon degradation Y89_5198 IPR032317 Y89_5198 Y89_5199 IPR003423 Outer membrane efflux protein Y89_5200 IPR003838 Permease FtsX-like Y89_5200 IPR025857 MacB-like periplasmic core domain Y89_5201 IPR003439 ABC transporter-like Y89_5201 IPR003593 AAA+ ATPase domain Y89_5201 IPR017871 ABC transporter, conserved site Y89_5201 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5202 IPR003439 ABC transporter-like Y89_5202 IPR003593 AAA+ ATPase domain Y89_5202 IPR017871 ABC transporter, conserved site Y89_5202 IPR022374 ABC transporter, ATP-binding protein, ChvD Y89_5202 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5202 IPR032781 Y89_5202 Y89_5204 IPR009057 Homeodomain-like Y89_5204 IPR036271 Y89_5204 Y89_5205 IPR003423 Outer membrane efflux protein Y89_5205 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_5206 IPR001036 Acriflavin resistance protein Y89_5206 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Y89_5206 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Y89_5207 IPR006143 RND efflux pump, membrane fusion protein Y89_5207 IPR032317 Y89_5207 Y89_5208 IPR009057 Homeodomain-like Y89_5208 IPR036271 Y89_5208 Y89_5209 IPR000014 PAS domain Y89_5209 IPR000160 GGDEF domain Y89_5209 IPR001610 PAC motif Y89_5209 IPR001633 EAL domain Y89_5209 IPR013655 PAS fold-3 Y89_5209 IPR029787 Nucleotide cyclase Y89_5209 IPR035919 Y89_5209 Y89_5209 IPR035965 Y89_5209 Y89_5210 IPR001085 Serine hydroxymethyltransferase Y89_5210 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_5210 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_5210 IPR015424 Pyridoxal phosphate-dependent transferase Y89_5210 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site Y89_5210 IPR039429 Y89_5210 Y89_5212 IPR003495 CobW/HypB/UreG domain Y89_5212 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Y89_5212 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5212 IPR036627 Y89_5212 Y89_5213 IPR007423 Protein of unknown function DUF466 Y89_5214 IPR003706 Carbon starvation protein CstA Y89_5214 IPR025299 CstA C-terminal domain Y89_5215 IPR021383 Protein of unknown function DUF3015 Y89_5216 IPR009875 PilZ domain Y89_5216 IPR027021 Cyclic di-GMP binding protein, PA4608 type Y89_5217 IPR003593 AAA+ ATPase domain Y89_5217 IPR004504 DNA repair protein RadA Y89_5217 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_5217 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_5217 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5218 IPR008457 Copper resistance D Y89_5219 IPR007420 Protein of unknown function DUF465 Y89_5220 IPR002110 Ankyrin repeat Y89_5220 IPR020683 Ankyrin repeat-containing domain Y89_5220 IPR036770 Y89_5220 Y89_5221 IPR002226 Catalase haem-binding site Y89_5221 IPR010582 Catalase immune-responsive domain Y89_5221 IPR011614 Catalase core domain Y89_5221 IPR018028 Catalase, mono-functional, haem-containing Y89_5221 IPR020835 Catalase-like domain Y89_5221 IPR024708 Catalase active site Y89_5221 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 Y89_5221 IPR037060 Y89_5221 Y89_5222 IPR001185 Large-conductance mechanosensitive channel Y89_5222 IPR019823 Large-conductance mechanosensitive channel, conserved site Y89_5222 IPR036019 Y89_5222 Y89_5222 IPR037673 Y89_5222 Y89_5223 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_5223 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Y89_5223 IPR008333 Oxidoreductase, FAD-binding domain Y89_5223 IPR017938 Riboflavin synthase-like beta-barrel Y89_5223 IPR039261 Y89_5223 Y89_5224 IPR004682 TRAP dicarboxylate transporter Y89_5224 IPR018389 Bacterial extracellular solute-binding protein, family 7 Y89_5224 IPR038404 Y89_5224 Y89_5225 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Y89_5225 IPR007848 Methyltransferase small domain Y89_5225 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD Y89_5225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5226 IPR025877 MobA-like NTP transferase domain Y89_5226 IPR029044 Nucleotide-diphospho-sugar transferases Y89_5227 IPR003777 XdhC- CoxI Y89_5227 IPR027051 XdhC Rossmann domain Y89_5228 IPR008168 Cytochrome c, class IC Y89_5228 IPR009056 Cytochrome c-like domain Y89_5228 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit Y89_5228 IPR036909 Y89_5228 Y89_5229 IPR002888 [2Fe-2S]-binding Y89_5229 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Y89_5229 IPR036010 Y89_5229 Y89_5229 IPR036884 Y89_5229 Y89_5230 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding Y89_5230 IPR036856 Y89_5230 Y89_5230 IPR037165 Y89_5230 Y89_5231 IPR010290 Transmembrane secretion effector Y89_5231 IPR036259 Y89_5231 Y89_5233 IPR005565 Haemolysin activator HlyB Y89_5233 IPR013686 Polypeptide-transport-associated, ShlB-type Y89_5234 IPR008638 Filamentous haemagglutinin, N-terminal Y89_5234 IPR011050 Pectin lyase fold/virulence factor Y89_5234 IPR012334 Pectin lyase fold Y89_5235 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y89_5235 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Y89_5235 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y89_5235 IPR036291 Y89_5235 Y89_5236 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Y89_5236 IPR007848 Methyltransferase small domain Y89_5236 IPR013675 Methyltransferase small, N-terminal Y89_5236 IPR023543 rRNA small subunit methyltransferase C Y89_5236 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5237 IPR002293 Amino acid/polyamine transporter I Y89_5237 IPR004840 Amino acid permease, conserved site Y89_5237 IPR004841 Amino acid permease/ SLC12A domain Y89_5238 IPR001727 Uncharacterised protein family UPF0016 Y89_5239 IPR009959 Polyketide cyclase SnoaL-like domain Y89_5239 IPR011721 Conserved hypothetical protein CHP02096 Y89_5239 IPR032710 Y89_5239 Y89_5240 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Y89_5240 IPR036291 Y89_5240 Y89_5241 IPR001915 Peptidase M48 Y89_5242 IPR003660 HAMP linker domain Y89_5242 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_5242 IPR033479 Y89_5242 Y89_5243 IPR003738 Protein of unknown function DUF159 Y89_5243 IPR036590 Y89_5243 Y89_5244 IPR003416 MgtC/SapB/SrpB transporter Y89_5245 IPR011322 Nitrogen regulatory PII-like, alpha/beta Y89_5245 IPR018551 Domain of unknown function DUF2007 Y89_5246 IPR017143 Uncharacterised conserved protein UCP037225 Y89_5246 IPR025990 Cysteine-rich CPXCG protein Y89_5247 IPR002123 Phospholipid/glycerol acyltransferase Y89_5250 IPR005619 Uncharacterised protein family, YajG Y89_5251 IPR006231 Malate:quinone-oxidoreductase Y89_5251 IPR036188 Y89_5251 Y89_5252 IPR028973 3-demethylubiquinone-9 3-methyltransferase Y89_5252 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_5255 IPR011051 RmlC-like cupin domain Y89_5255 IPR014710 RmlC-like jelly roll fold Y89_5255 IPR027565 Cupin fold metalloprotein, WbuC family Y89_5256 IPR000836 Phosphoribosyltransferase domain Y89_5256 IPR029057 Phosphoribosyltransferase-like Y89_5257 IPR005765 Uracil phosphoribosyl transferase Y89_5257 IPR029057 Phosphoribosyltransferase-like Y89_5257 IPR034332 Y89_5257 Y89_5258 IPR006042 Xanthine/uracil permease Y89_5258 IPR006043 Xanthine/uracil/vitamin C permease Y89_5259 IPR007893 Spore coat protein U Y89_5260 IPR007893 Spore coat protein U Y89_5261 IPR007893 Spore coat protein U Y89_5262 IPR008962 PapD-like Y89_5262 IPR013783 Immunoglobulin-like fold Y89_5262 IPR016147 PapD, N-terminal, bacterial Y89_5263 IPR000015 Outer membrane usher protein Y89_5263 IPR018030 Fimbrial membrane usher, conserved site Y89_5263 IPR025949 PapC-like, C-terminal domain Y89_5264 IPR007893 Spore coat protein U Y89_5265 IPR011701 Major facilitator superfamily Y89_5265 IPR036259 Y89_5265 Y89_5266 IPR001015 Ferrochelatase Y89_5267 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Y89_5267 IPR010099 Sugar nucleotide epimerase YfcH,-like putative Y89_5267 IPR013549 Domain of unknown function DUF1731 Y89_5267 IPR036291 Y89_5267 Y89_5268 IPR002937 Amine oxidase Y89_5268 IPR034721 Y89_5268 Y89_5268 IPR036188 Y89_5268 Y89_5269 IPR007553 Domain of unknown function DUF523 Y89_5269 IPR013560 Domain of unknown function DUF1722 Y89_5269 IPR017087 Uncharacterised conserved protein UCP037004 Y89_5270 IPR000551 MerR-type HTH domain Y89_5270 IPR009061 DNA binding domain, putative Y89_5270 IPR036594 Y89_5270 Y89_5271 IPR002081 Cryptochrome/DNA photolyase, class 1 Y89_5271 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal Y89_5271 IPR006050 DNA photolyase, N-terminal Y89_5271 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5271 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal Y89_5271 IPR036134 Y89_5271 Y89_5271 IPR036155 Y89_5271 Y89_5272 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel Y89_5272 IPR018550 Lipid A 3-O-deacylase-related Y89_5273 IPR001920 Asp/Glu racemase Y89_5273 IPR004391 Glutamate racemase Y89_5273 IPR015942 Asp/Glu/hydantoin racemase Y89_5273 IPR018187 Asp/Glu racemase, active site Y89_5273 IPR033134 Y89_5273 Y89_5274 IPR000594 UBA/THIF-type NAD/FAD binding fold Y89_5274 IPR035985 Y89_5274 Y89_5275 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Y89_5275 IPR004556 Modification methylase HemK Y89_5275 IPR007848 Methyltransferase small domain Y89_5275 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific Y89_5275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5276 IPR000352 Peptide chain release factor class I/class II Y89_5276 IPR004373 Peptide chain release factor 1 Y89_5276 IPR005139 Peptide chain release factor Y89_5277 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase Y89_5277 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Y89_5277 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal Y89_5277 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain Y89_5277 IPR018214 Glutamyl-tRNA reductase, conserved site Y89_5277 IPR036291 Y89_5277 Y89_5277 IPR036343 Y89_5277 Y89_5277 IPR036453 Y89_5277 Y89_5278 IPR011990 Tetratricopeptide-like helical domain Y89_5278 IPR019734 Tetratricopeptide repeat Y89_5279 IPR004565 Outer membrane lipoprotein LolB Y89_5279 IPR029046 Lipoprotein localisation LolA/LolB/LppX Y89_5280 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Y89_5280 IPR006204 GHMP kinase N-terminal domain Y89_5280 IPR013750 GHMP kinase, C-terminal domain Y89_5280 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_5280 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_5280 IPR036554 Y89_5280 Y89_5282 IPR001021 Ribosomal protein L25, long-form Y89_5282 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain Y89_5282 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Y89_5282 IPR020057 Ribosomal protein L25, beta domain Y89_5282 IPR029751 Ribosomal protein L25 Y89_5282 IPR037121 Y89_5282 Y89_5283 IPR001328 Peptidyl-tRNA hydrolase Y89_5283 IPR018171 Peptidyl-tRNA hydrolase, conserved site Y89_5283 IPR036416 Y89_5283 Y89_5284 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 Y89_5284 IPR006073 GTP binding domain Y89_5284 IPR012675 Beta-grasp domain Y89_5284 IPR012676 TGS-like Y89_5284 IPR013029 Domain of unknown function DUF933 Y89_5284 IPR023192 TGS-like domain Y89_5284 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5285 IPR001387 Cro/C1-type helix-turn-helix domain Y89_5285 IPR010982 Lambda repressor-like, DNA-binding domain Y89_5285 IPR013430 Toxin-antitoxin system, antidote protein, HigA Y89_5286 IPR000531 TonB-dependent receptor, beta-barrel Y89_5286 IPR010105 TonB-dependent siderophore receptor Y89_5286 IPR012910 TonB-dependent receptor, plug Y89_5286 IPR036942 Y89_5286 Y89_5286 IPR037066 Y89_5286 Y89_5287 IPR001765 Carbonic anhydrase Y89_5287 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site Y89_5287 IPR036874 Y89_5287 Y89_5288 IPR005322 Peptidase C69, dipeptidase A Y89_5289 IPR000182 GNAT domain Y89_5289 IPR006464 Ribosomal-protein-alanine acetyltransferase Y89_5289 IPR016181 Acyl-CoA N-acyltransferase Y89_5298 IPR026045 Ferric binding protein Y89_5299 IPR000515 MetI-like domain Y89_5299 IPR035906 Y89_5299 Y89_5300 IPR003399 Mammalian cell entry-related Y89_5301 IPR007498 Paraquat-inducible protein A Y89_5302 IPR007498 Paraquat-inducible protein A Y89_5303 IPR013130 Ferric reductase transmembrane component-like domain Y89_5303 IPR022837 Sulphoxide reductase heme-binding subunit YedZ Y89_5304 IPR000572 Oxidoreductase, molybdopterin-binding domain Y89_5304 IPR022867 Sulphoxide reductase catalytic subunit YedY Y89_5304 IPR036374 Y89_5304 Y89_5305 IPR000462 CDP-alcohol phosphatidyltransferase Y89_5305 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase Y89_5306 IPR000506 Acetohydroxy acid isomeroreductase C-terminal Y89_5306 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_5306 IPR013023 Acetohydroxy acid isomeroreductase Y89_5306 IPR013116 Acetohydroxy acid isomeroreductase, catalytic Y89_5306 IPR014359 Ketol-acid reductoisomerase, gammaproteobacteria Y89_5306 IPR036291 Y89_5306 Y89_5307 IPR004789 Acetolactate synthase, small subunit Y89_5307 IPR019455 Acetolactate synthase, small subunit, C-terminal Y89_5307 IPR027271 Y89_5307 Y89_5308 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Y89_5308 IPR012000 Thiamine pyrophosphate enzyme, central domain Y89_5308 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Y89_5308 IPR012846 Acetolactate synthase, large subunit, biosynthetic Y89_5308 IPR029035 DHS-like NAD/FAD-binding domain Y89_5308 IPR029061 Thiamin diphosphate-binding fold Y89_5309 IPR025392 Domain of unknown function DUF4124 Y89_5310 IPR007384 Protein of unknown function UCP006257 Y89_5310 IPR023376 YqcC-like domain Y89_5310 IPR036814 Y89_5310 Y89_5311 IPR011990 Tetratricopeptide-like helical domain Y89_5312 IPR001264 Glycosyl transferase, family 51 Y89_5312 IPR001460 Penicillin-binding protein, transpeptidase Y89_5312 IPR011813 Penicillin-binding protein 1B Y89_5312 IPR012338 Beta-lactamase/transpeptidase-like Y89_5312 IPR023346 Lysozyme-like domain Y89_5312 IPR028166 Bifunctional transglycosylase second domain Y89_5312 IPR036950 Y89_5312 Y89_5313 IPR002575 Aminoglycoside phosphotransferase Y89_5313 IPR011009 Protein kinase-like domain Y89_5313 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5314 IPR001646 Pentapeptide repeat Y89_5314 IPR016933 Pentapeptide repeat-containing uncharacterised conserved protein UCP029688 Y89_5315 IPR007077 TfoX, C-terminal Y89_5316 IPR000595 Cyclic nucleotide-binding domain Y89_5316 IPR014710 RmlC-like jelly roll fold Y89_5316 IPR018488 Cyclic nucleotide-binding, conserved site Y89_5316 IPR018490 Cyclic nucleotide-binding-like Y89_5317 IPR007314 Domain of unknown function DUF399 Y89_5317 IPR016773 Ferric uptake regulator, CjrA, predicted Y89_5318 IPR003439 ABC transporter-like Y89_5318 IPR003593 AAA+ ATPase domain Y89_5318 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5319 IPR000522 ABC transporter, permease protein Y89_5319 IPR037294 Y89_5319 Y89_5320 IPR002491 ABC transporter periplasmic binding domain Y89_5321 IPR007845 Haemin-degrading HemS/ChuX domain Y89_5322 IPR000531 TonB-dependent receptor, beta-barrel Y89_5322 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor Y89_5322 IPR011276 TonB-dependent haem/haemoglobin receptor Y89_5322 IPR012910 TonB-dependent receptor, plug Y89_5322 IPR036942 Y89_5322 Y89_5322 IPR037066 Y89_5322 Y89_5323 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Y89_5323 IPR036922 Y89_5323 Y89_5324 IPR025411 Domain of unknown function DUF4136 Y89_5325 IPR025597 Protein of unknown function DUF4345 Y89_5326 IPR007332 Protein of unknown function DUF411 Y89_5327 IPR004839 Aminotransferase, class I/classII Y89_5327 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_5327 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_5327 IPR015424 Pyridoxal phosphate-dependent transferase Y89_5328 IPR003719 Phenazine biosynthesis PhzF protein Y89_5329 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Y89_5331 IPR006043 Xanthine/uracil/vitamin C permease Y89_5331 IPR026033 Purine permease PbuG-like Y89_5332 IPR010280 (Uracil-5)-methyltransferase family Y89_5332 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA Y89_5332 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5332 IPR030390 Y89_5332 Y89_5332 IPR030391 Y89_5332 Y89_5333 IPR005224 Sugar fermentation stimulation protein Y89_5334 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Y89_5334 IPR004839 Aminotransferase, class I/classII Y89_5334 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_5334 IPR015424 Pyridoxal phosphate-dependent transferase Y89_5335 IPR000962 Zinc finger, DksA/TraR C4-type Y89_5335 IPR012784 RNA polymerase-binding transcription factor DksA Y89_5335 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Y89_5335 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Y89_5335 IPR037187 Y89_5335 Y89_5336 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Y89_5336 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5336 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Y89_5336 IPR022380 Glutamyl-Q tRNA(Asp) synthetase Y89_5338 IPR000014 PAS domain Y89_5338 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_5338 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_5338 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_5338 IPR013767 PAS fold Y89_5338 IPR035965 Y89_5338 Y89_5338 IPR036097 Y89_5338 Y89_5338 IPR036890 Y89_5338 Y89_5339 IPR001789 Signal transduction response regulator, receiver domain Y89_5339 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_5339 IPR003593 AAA+ ATPase domain Y89_5339 IPR011006 CheY-like superfamily Y89_5339 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_5339 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_5339 IPR025944 Sigma-54 interaction domain, conserved site Y89_5339 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5340 IPR002646 Poly A polymerase, head domain Y89_5340 IPR010206 Poly(A) polymerase I Y89_5340 IPR025866 Polymerase A arginine-rich C-terminal domain Y89_5340 IPR032828 Y89_5340 Y89_5341 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK Y89_5341 IPR035907 Y89_5341 Y89_5342 IPR003700 Ketopantoate hydroxymethyltransferase Y89_5342 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_5343 IPR003721 Pantoate-beta-alanine ligase Y89_5343 IPR004821 Cytidyltransferase-like domain Y89_5343 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5344 IPR003190 Aspartate decarboxylase Y89_5344 IPR009010 Aspartate decarboxylase-like domain Y89_5345 IPR001672 Phosphoglucose isomerase (PGI) Y89_5345 IPR018189 Phosphoglucose isomerase, conserved site Y89_5345 IPR023096 Phosphoglucose isomerase, C-terminal Y89_5346 IPR000873 AMP-dependent synthetase/ligase Y89_5346 IPR011904 Acetate-CoA ligase Y89_5346 IPR020845 AMP-binding, conserved site Y89_5346 IPR025110 AMP-binding enzyme C-terminal domain Y89_5346 IPR032387 Y89_5346 Y89_5347 IPR018713 Domain of unknown function DUF2236 Y89_5348 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_5348 IPR008023 Protein of unknown function DUF748 Y89_5348 IPR036737 Y89_5348 Y89_5349 IPR021268 Protein of unknown function DUF2845 Y89_5350 IPR021268 Protein of unknown function DUF2845 Y89_5351 IPR008462 CsbD-like Y89_5351 IPR026042 Stress response protein YjbJ Y89_5351 IPR036629 Y89_5351 Y89_5352 IPR007055 BON domain Y89_5352 IPR014004 Transport-associated and nodulation domain, bacteria Y89_5353 IPR001247 Exoribonuclease, phosphorolytic domain 1 Y89_5353 IPR003029 Ribosomal protein S1, RNA-binding domain Y89_5353 IPR004087 K Homology domain Y89_5353 IPR004088 K Homology domain, type 1 Y89_5353 IPR012162 Polyribonucleotide nucleotidyltransferase Y89_5353 IPR012340 Nucleic acid-binding, OB-fold Y89_5353 IPR015847 Exoribonuclease, phosphorolytic domain 2 Y89_5353 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain Y89_5353 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_5353 IPR022967 RNA-binding domain, S1 Y89_5353 IPR027408 PNPase/RNase PH domain Y89_5353 IPR036345 Y89_5353 Y89_5353 IPR036612 Y89_5353 Y89_5354 IPR000589 Ribosomal protein S15 Y89_5354 IPR005290 Ribosomal protein S15, bacterial-type Y89_5354 IPR009068 S15/NS1, RNA-binding Y89_5355 IPR002501 Pseudouridine synthase II Y89_5355 IPR014780 tRNA pseudouridine synthase II, TruB Y89_5355 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal Y89_5355 IPR015947 PUA-like domain Y89_5355 IPR020103 Pseudouridine synthase, catalytic domain Y89_5355 IPR032819 Y89_5355 Y89_5355 IPR036974 Y89_5355 Y89_5356 IPR000238 Ribosome-binding factor A Y89_5356 IPR015946 K homology domain-like, alpha/beta Y89_5356 IPR020053 Ribosome-binding factor A, conserved site Y89_5356 IPR023799 Ribosome-binding factor A domain Y89_5357 IPR000178 Translation initiation factor aIF-2, bacterial-like Y89_5357 IPR000795 Elongation factor, GTP-binding domain Y89_5357 IPR005225 Small GTP-binding protein domain Y89_5357 IPR006847 Translation initiation factor IF-2, N-terminal Y89_5357 IPR009000 Translation protein, beta-barrel domain Y89_5357 IPR009061 DNA binding domain, putative Y89_5357 IPR013575 Initiation factor 2 associated domain, bacterial Y89_5357 IPR023115 Translation initiation factor IF- 2, domain 3 Y89_5357 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5357 IPR036925 Y89_5357 Y89_5358 IPR003029 Ribosomal protein S1, RNA-binding domain Y89_5358 IPR009019 K homology domain, prokaryotic type Y89_5358 IPR010213 Transcription termination factor NusA Y89_5358 IPR010214 Transcription termination factor NusA, C-terminal duplication Y89_5358 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical Y89_5358 IPR012340 Nucleic acid-binding, OB-fold Y89_5358 IPR013735 Transcription factor NusA, N-terminal Y89_5358 IPR015946 K homology domain-like, alpha/beta Y89_5358 IPR022967 RNA-binding domain, S1 Y89_5358 IPR025249 KH domain, NusA-like Y89_5358 IPR030842 Y89_5358 Y89_5358 IPR036555 Y89_5358 Y89_5359 IPR003728 Ribosome maturation factor RimP Y89_5359 IPR028989 Ribosome maturation factor RimP, N-terminal Y89_5359 IPR028998 Ribosome maturation factor RimP, C-terminal Y89_5359 IPR035956 Y89_5359 Y89_5359 IPR036847 Y89_5359 Y89_5360 IPR000652 Triosephosphate isomerase Y89_5360 IPR013785 Aldolase-type TIM barrel Y89_5360 IPR020861 Triosephosphate isomerase, active site Y89_5360 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic Y89_5360 IPR035990 Y89_5360 Y89_5361 IPR005841 Alpha-D-phosphohexomutase superfamily Y89_5361 IPR005843 Alpha-D-phosphohexomutase, C-terminal Y89_5361 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Y89_5361 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Y89_5361 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Y89_5361 IPR006352 Phosphoglucosamine mutase Y89_5361 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Y89_5361 IPR016066 Alpha-D-phosphohexomutase, conserved site Y89_5361 IPR036900 Y89_5361 Y89_5362 IPR000489 Pterin-binding Y89_5362 IPR006390 Dihydropteroate synthase Y89_5362 IPR011005 Dihydropteroate synthase-like Y89_5363 IPR000642 Peptidase M41 Y89_5363 IPR003593 AAA+ ATPase domain Y89_5363 IPR003959 ATPase, AAA-type, core Y89_5363 IPR003960 ATPase, AAA-type, conserved site Y89_5363 IPR005936 Peptidase, FtsH Y89_5363 IPR011546 Peptidase M41, FtsH extracellular Y89_5363 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5363 IPR037219 Y89_5363 Y89_5364 IPR002877 Ribosomal RNA methyltransferase FtsJ domain Y89_5364 IPR015507 Ribosomal RNA large subunit methyltransferase E Y89_5364 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5365 IPR001890 RNA-binding, CRM domain Y89_5365 IPR017924 RNA-binding protein YhbY Y89_5365 IPR035920 Y89_5365 Y89_5367 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Y89_5367 IPR006359 Transcription elongation factor GreA Y89_5367 IPR018151 Transcription elongation factor, GreA/GreB, conserved site Y89_5367 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal Y89_5367 IPR023459 Transcription elongation factor GreA/GreB family Y89_5367 IPR028624 Transcription elongation factor GreA/GreB Y89_5367 IPR036805 Y89_5367 Y89_5367 IPR036953 Y89_5367 Y89_5368 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Y89_5368 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain Y89_5368 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain Y89_5368 IPR006275 Carbamoyl-phosphate synthase, large subunit Y89_5368 IPR011607 Methylglyoxal synthase-like domain Y89_5368 IPR016185 Pre-ATP-grasp domain Y89_5368 IPR036897 Y89_5368 Y89_5368 IPR036914 Y89_5368 Y89_5369 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_5369 IPR004778 Homoserine/Threonine efflux protein Y89_5370 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain Y89_5370 IPR006274 Carbamoyl-phosphate synthase, small subunit Y89_5370 IPR017926 Glutamine amidotransferase Y89_5370 IPR029062 Class I glutamine amidotransferase-like Y89_5370 IPR036480 Y89_5370 Y89_5371 IPR000846 Dihydrodipicolinate reductase, N-terminal Y89_5371 IPR022663 Dihydrodipicolinate reductase, C-terminal Y89_5371 IPR022664 Dihydrodipicolinate reductase, conserved site Y89_5371 IPR023940 Dihydrodipicolinate reductase, bacterial Y89_5371 IPR036291 Y89_5371 Y89_5372 IPR001305 Heat shock protein DnaJ, cysteine-rich domain Y89_5372 IPR001623 DnaJ domain Y89_5372 IPR002939 Chaperone DnaJ, C-terminal Y89_5372 IPR008971 HSP40/DnaJ peptide-binding Y89_5372 IPR012724 Chaperone DnaJ Y89_5372 IPR018253 DnaJ domain, conserved site Y89_5372 IPR036410 Y89_5372 Y89_5372 IPR036869 Y89_5372 Y89_5373 IPR012725 Chaperone DnaK Y89_5373 IPR013126 Heat shock protein 70 family Y89_5373 IPR018181 Heat shock protein 70, conserved site Y89_5373 IPR029047 Heat shock protein 70kD, peptide-binding domain Y89_5373 IPR029048 Heat shock protein 70kD, C-terminal domain Y89_5374 IPR000740 GrpE nucleotide exchange factor Y89_5374 IPR009012 GrpE nucleotide exchange factor, head Y89_5374 IPR013805 GrpE nucleotide exchange factor, coiled-coil Y89_5375 IPR003395 RecF/RecN/SMC, N-terminal Y89_5375 IPR004604 DNA recombination/repair protein RecN Y89_5375 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5376 IPR002481 Ferric-uptake regulator Y89_5376 IPR036388 Y89_5376 Y89_5376 IPR036390 Y89_5376 Y89_5377 IPR007450 Lipoprotein SmpA/OmlA Y89_5377 IPR026592 Outer membrane protein assembly factor BamE Y89_5377 IPR037873 Y89_5377 Y89_5378 IPR005346 RnfH protein Y89_5378 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Y89_5378 IPR037021 Y89_5378 Y89_5379 IPR005031 Streptomyces cyclase/dehydrase Y89_5379 IPR023393 START-like domain Y89_5380 IPR000037 SsrA-binding protein Y89_5380 IPR020081 SsrA-binding protein, conserved site Y89_5380 IPR023620 Small protein B Y89_5381 IPR000524 Transcription regulator HTH, GntR Y89_5381 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_5381 IPR011711 GntR, C-terminal Y89_5381 IPR036388 Y89_5381 Y89_5381 IPR036390 Y89_5381 Y89_5382 IPR003804 L-lactate permease Y89_5383 IPR000262 FMN-dependent dehydrogenase Y89_5383 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site Y89_5383 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent Y89_5383 IPR013785 Aldolase-type TIM barrel Y89_5383 IPR020920 L-lactate dehydrogenase, bacterial Y89_5384 IPR004017 Cysteine-rich domain Y89_5384 IPR004113 FAD-linked oxidase, C-terminal Y89_5384 IPR006094 FAD linked oxidase, N-terminal Y89_5384 IPR009051 Alpha-helical ferredoxin Y89_5384 IPR016164 FAD-linked oxidase-like, C-terminal Y89_5384 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_5384 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_5384 IPR036318 Y89_5384 Y89_5385 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic Y89_5385 IPR016067 S-adenosylmethionine decarboxylase, core Y89_5385 IPR017716 S-adenosylmethionine decarboxylase proenzyme Y89_5386 IPR001045 Spermidine/spermine synthases family Y89_5386 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5386 IPR030373 Y89_5386 Y89_5386 IPR035246 Y89_5386 Y89_5386 IPR037163 Y89_5386 Y89_5388 IPR001789 Signal transduction response regulator, receiver domain Y89_5388 IPR001867 Signal transduction response regulator, C-terminal Y89_5388 IPR011006 CheY-like superfamily Y89_5388 IPR016032 Signal transduction response regulator, C-terminal effector Y89_5388 IPR036388 Y89_5388 Y89_5389 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_5389 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_5389 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_5389 IPR036097 Y89_5389 Y89_5389 IPR036890 Y89_5389 Y89_5390 IPR000551 MerR-type HTH domain Y89_5390 IPR009061 DNA binding domain, putative Y89_5390 IPR011789 Cu(I)-responsive transcriptional regulator Y89_5390 IPR015358 Transcription regulator MerR, DNA binding Y89_5391 IPR009267 Protein of unknown function DUF925 Y89_5392 IPR000620 Drug/metabolite transporter Y89_5393 IPR000687 RIO kinase Y89_5393 IPR011009 Protein kinase-like domain Y89_5393 IPR018935 RIO kinase, conserved site Y89_5394 IPR001789 Signal transduction response regulator, receiver domain Y89_5394 IPR003607 HD/PDEase domain Y89_5394 IPR011006 CheY-like superfamily Y89_5396 IPR000620 Drug/metabolite transporter Y89_5397 IPR000485 AsnC-type HTH domain Y89_5397 IPR011008 Dimeric alpha-beta barrel Y89_5397 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Y89_5397 IPR019887 Transcription regulator AsnC-type, C-terminal Y89_5397 IPR019888 Transcription regulator AsnC-type Y89_5397 IPR036388 Y89_5397 Y89_5397 IPR036390 Y89_5397 Y89_5398 IPR002155 Thiolase Y89_5398 IPR016039 Thiolase-like Y89_5398 IPR020616 Thiolase, N-terminal Y89_5398 IPR020617 Thiolase, C-terminal Y89_5399 IPR002347 Glucose/ribitol dehydrogenase Y89_5399 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_5399 IPR036291 Y89_5399 Y89_5400 IPR009057 Homeodomain-like Y89_5400 IPR018060 DNA binding HTH domain, AraC-type Y89_5400 IPR032687 Y89_5400 Y89_5401 IPR002539 MaoC-like domain Y89_5401 IPR003965 Fatty acid synthase Y89_5401 IPR029069 HotDog domain Y89_5402 IPR025984 MazG-like domain Y89_5403 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5403 IPR033664 Y89_5403 Y89_5404 IPR025411 Domain of unknown function DUF4136 Y89_5405 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Y89_5405 IPR030395 Y89_5405 Y89_5406 IPR025411 Domain of unknown function DUF4136 Y89_5407 IPR000182 GNAT domain Y89_5407 IPR016181 Acyl-CoA N-acyltransferase Y89_5408 IPR003787 Sulphur relay, DsrE/F-like protein Y89_5408 IPR027396 DsrEFH-like Y89_5409 IPR011053 Single hybrid motif Y89_5409 IPR033753 Y89_5409 Y89_5410 IPR007344 GrpB/Dephospho-CoA kinase Y89_5411 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5412 IPR013216 Methyltransferase type 11 Y89_5412 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5414 IPR003010 Carbon-nitrogen hydrolase Y89_5414 IPR036526 Y89_5414 Y89_5415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5416 IPR002293 Amino acid/polyamine transporter I Y89_5417 IPR005814 Aminotransferase class-III Y89_5417 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_5417 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_5417 IPR015424 Pyridoxal phosphate-dependent transferase Y89_5418 IPR000792 Transcription regulator LuxR, C-terminal Y89_5418 IPR016032 Signal transduction response regulator, C-terminal effector Y89_5418 IPR036388 Y89_5418 Y89_5419 IPR000795 Elongation factor, GTP-binding domain Y89_5419 IPR004535 Translation elongation factor, selenocysteine-specific Y89_5419 IPR005225 Small GTP-binding protein domain Y89_5419 IPR009000 Translation protein, beta-barrel domain Y89_5419 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Y89_5419 IPR015190 Translation elongation factor SelB, winged helix, type 2 Y89_5419 IPR015191 Translation elongation factor SelB, winged helix, type 3 Y89_5419 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5419 IPR031157 Y89_5419 Y89_5419 IPR036388 Y89_5419 Y89_5419 IPR036390 Y89_5419 Y89_5420 IPR004534 L-seryl-tRNA selenium transferase Y89_5420 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_5420 IPR015424 Pyridoxal phosphate-dependent transferase Y89_5420 IPR018319 L-seryl-tRNA selenium transferase-like Y89_5420 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain Y89_5421 IPR006452 Formate dehydrogenase accessory protein Y89_5421 IPR024064 FdhE-like Y89_5422 IPR006471 Formate dehydrogenase, gamma subunit Y89_5422 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Y89_5422 IPR016174 Di-haem cytochrome, transmembrane Y89_5423 IPR006470 Formate dehydrogenase, beta subunit Y89_5423 IPR014603 Formate dehydrogenase, iron-sulphur subunit Y89_5423 IPR015246 Formate dehydrogenase, transmembrane Y89_5423 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_5423 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_5423 IPR038384 Y89_5423 Y89_5426 IPR000073 Alpha/beta hydrolase fold-1 Y89_5426 IPR029058 Alpha/Beta hydrolase fold Y89_5427 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_5427 IPR013785 Aldolase-type TIM barrel Y89_5427 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_5427 IPR036188 Y89_5427 Y89_5428 IPR006750 Protein of unknown function DUF606 Y89_5429 IPR014973 Protein of unknown function DUF1835 Y89_5430 IPR005358 Putative zinc- or iron-chelating domain containing protein Y89_5431 IPR003342 Glycosyl transferase, family 39 Y89_5432 IPR001173 Glycosyltransferase 2-like Y89_5432 IPR029044 Nucleotide-diphospho-sugar transferases Y89_5437 IPR032876 Y89_5437 Y89_5439 IPR011928 Bacteriophage phiJL001, Gp84 Y89_5439 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal Y89_5439 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal Y89_5443 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal Y89_5443 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal Y89_5446 IPR016893 Protein of unknown function UCP028589 Y89_5449 IPR009752 Bacteriophage Mu, Gp36 Y89_5455 IPR006522 Phage virion morphogensis protein Y89_5456 IPR006528 Phage head morphogenesis domain Y89_5457 IPR009279 Protein of unknown function DUF935 Y89_5458 IPR012036 Bacteriophage Mu, Gp28 Y89_5459 IPR021874 Bacteriophage Mu, Gp27 Y89_5464 IPR008258 Lytic transglycosylase-like SLT domain Y89_5464 IPR023346 Lysozyme-like domain Y89_5466 IPR025140 Protein of unknown function DUF4063 Y89_5469 IPR001387 Cro/C1-type helix-turn-helix domain Y89_5469 IPR010982 Lambda repressor-like, DNA-binding domain Y89_5470 IPR026365 Phage-associated protein, BcepMu gp16 family Y89_5473 IPR036388 Y89_5473 Y89_5473 IPR036390 Y89_5473 Y89_5475 IPR001584 Integrase, catalytic core Y89_5475 IPR012337 Ribonuclease H-like domain Y89_5475 IPR036397 Y89_5475 Y89_5476 IPR003593 AAA+ ATPase domain Y89_5476 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5481 IPR021505 Bacteriophage B3, Orf6 Y89_5482 IPR016868 Bacteriophage B3, Orf5 Y89_5482 IPR024498 Domain of unknown function DUF2786 Y89_5485 IPR009363 Bacteriophage Mu, Gp16 Y89_5486 IPR009057 Homeodomain-like Y89_5486 IPR014875 Mor transcription activator Y89_5488 IPR007267 GtrA-like protein Y89_5489 IPR002528 Multi antimicrobial extrusion protein Y89_5491 IPR003841 Sodium-dependent phosphate transport protein Y89_5491 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein Y89_5491 IPR026022 PhoU domain Y89_5491 IPR038078 Y89_5491 Y89_5493 IPR016934 Uncharacterised conserved protein UCP029691 Y89_5494 IPR001757 Cation-transporting P-type ATPase Y89_5494 IPR004014 Cation-transporting P-type ATPase, N-terminal Y89_5494 IPR006068 Cation-transporting P-type ATPase, C-terminal Y89_5494 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB Y89_5494 IPR008250 P-type ATPase, A domain Y89_5494 IPR018303 P-type ATPase, phosphorylation site Y89_5494 IPR023214 HAD-like domain Y89_5494 IPR023298 P-type ATPase, transmembrane domain Y89_5494 IPR023299 P-type ATPase, cytoplasmic domain N Y89_5494 IPR036412 Y89_5494 Y89_5496 IPR001447 Arylamine N-acetyltransferase Y89_5496 IPR038765 Y89_5496 Y89_5497 IPR018706 Protein of unknown function DUF2214, membrane Y89_5498 IPR001100 Y89_5498 Y89_5498 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y89_5498 IPR006258 Dihydrolipoamide dehydrogenase Y89_5498 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Y89_5498 IPR016156 FAD/NAD-linked reductase, dimerisation domain Y89_5498 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_5498 IPR036188 Y89_5498 Y89_5499 IPR003736 Phenylacetic acid degradation-related domain Y89_5499 IPR006683 Thioesterase superfamily Y89_5499 IPR029069 HotDog domain Y89_5500 IPR001647 DNA-binding HTH domain, TetR-type Y89_5500 IPR009057 Homeodomain-like Y89_5500 IPR036271 Y89_5500 Y89_5501 IPR002347 Glucose/ribitol dehydrogenase Y89_5501 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_5501 IPR036291 Y89_5501 Y89_5502 IPR004254 Hly-III-related Y89_5502 IPR005744 HylII Y89_5503 IPR000620 Drug/metabolite transporter Y89_5504 IPR016935 Protein of unknown function DUF2338 Y89_5504 IPR036291 Y89_5504 Y89_5505 IPR004298 Nicotianamine synthase Y89_5505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5506 IPR000531 TonB-dependent receptor, beta-barrel Y89_5506 IPR010105 TonB-dependent siderophore receptor Y89_5506 IPR012910 TonB-dependent receptor, plug Y89_5506 IPR036942 Y89_5506 Y89_5506 IPR037066 Y89_5506 Y89_5507 IPR012429 Protein of unknown function DUF1624 Y89_5508 IPR000183 Ornithine/DAP/Arg decarboxylase Y89_5508 IPR002985 Arginine decarboxylase Y89_5508 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Y89_5508 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Y89_5508 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Y89_5508 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Y89_5508 IPR029066 PLP-binding barrel Y89_5509 IPR001950 Translation initiation factor SUI1 Y89_5509 IPR005872 Archaeal/bacterial translation initiation factor SUI1 Y89_5509 IPR036877 Y89_5509 Y89_5510 IPR000086 NUDIX hydrolase domain Y89_5510 IPR015797 NUDIX hydrolase domain-like Y89_5510 IPR024195 NUDIX hydrolase, YfcD, predicted Y89_5511 IPR016936 Uncharacterised conserved protein UCP029693 Y89_5513 IPR000160 GGDEF domain Y89_5513 IPR001789 Signal transduction response regulator, receiver domain Y89_5513 IPR011006 CheY-like superfamily Y89_5513 IPR029787 Nucleotide cyclase Y89_5514 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_5514 IPR004090 Chemotaxis methyl-accepting receptor Y89_5515 IPR003834 Cytochrome c assembly protein, transmembrane domain Y89_5515 IPR022910 Thiol:disulphide interchange protein DsbD Y89_5515 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Y89_5515 IPR036249 Y89_5515 Y89_5515 IPR036929 Y89_5515 Y89_5516 IPR001874 Dehydroquinase, class II Y89_5516 IPR018509 Dehydroquinase, class II, conserved site Y89_5516 IPR036441 Y89_5516 Y89_5517 IPR000089 Biotin/lipoyl attachment Y89_5517 IPR001249 Acetyl-CoA biotin carboxyl carrier Y89_5517 IPR001882 Biotin-binding site Y89_5517 IPR011053 Single hybrid motif Y89_5518 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase Y89_5518 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Y89_5518 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal Y89_5518 IPR005482 Biotin carboxylase, C-terminal Y89_5518 IPR011054 Rudiment single hybrid motif Y89_5518 IPR013815 ATP-grasp fold, subdomain 1 Y89_5518 IPR016185 Pre-ATP-grasp domain Y89_5519 IPR004498 Ribosomal protein L11 methyltransferase Y89_5519 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5520 IPR011723 Zinc finger/thioredoxin putative Y89_5520 IPR021834 Protein of unknown function DUF3426 Y89_5521 IPR001269 tRNA-dihydrouridine synthase Y89_5521 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 Y89_5521 IPR013785 Aldolase-type TIM barrel Y89_5521 IPR018517 tRNA-dihydrouridine synthase, conserved site Y89_5521 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal Y89_5521 IPR032887 Y89_5521 Y89_5522 IPR002197 DNA binding HTH domain, Fis-type Y89_5522 IPR005412 DNA-binding protein Fis Y89_5522 IPR009057 Homeodomain-like Y89_5523 IPR002695 AICARFT/IMPCHase bienzyme Y89_5523 IPR011607 Methylglyoxal synthase-like domain Y89_5523 IPR016193 Cytidine deaminase-like Y89_5523 IPR024051 AICAR transformylase domain Y89_5523 IPR036914 Y89_5523 Y89_5524 IPR000115 Phosphoribosylglycinamide synthetase Y89_5524 IPR011054 Rudiment single hybrid motif Y89_5524 IPR013815 ATP-grasp fold, subdomain 1 Y89_5524 IPR016185 Pre-ATP-grasp domain Y89_5524 IPR020559 Phosphoribosylglycinamide synthetase, conserved site Y89_5524 IPR020560 Phosphoribosylglycinamide synthetase, C-domain Y89_5524 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Y89_5524 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal Y89_5524 IPR037123 Y89_5524 Y89_5525 IPR001789 Signal transduction response regulator, receiver domain Y89_5525 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_5525 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_5525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_5525 IPR011006 CheY-like superfamily Y89_5525 IPR011622 7TM-DISM receptor, extracellular domain, type 2 Y89_5525 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Y89_5525 IPR036097 Y89_5525 Y89_5525 IPR036890 Y89_5525 Y89_5526 IPR002771 Multiple antibiotic resistance (MarC)-related Y89_5527 IPR000709 Leu/Ile/Val-binding protein Y89_5527 IPR017777 ABC transporter, urea, substrate-binding, UrtA Y89_5527 IPR028082 Periplasmic binding protein-like I Y89_5528 IPR001851 ABC transporter, permease Y89_5528 IPR016024 Armadillo-type fold Y89_5528 IPR017779 ABC transporter, urea, permease protein, UrtB Y89_5529 IPR001851 ABC transporter, permease Y89_5529 IPR017778 ABC transporter, urea, permease protein, UrtC Y89_5530 IPR003439 ABC transporter-like Y89_5530 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD Y89_5530 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5530 IPR032823 Y89_5530 Y89_5531 IPR003439 ABC transporter-like Y89_5531 IPR003593 AAA+ ATPase domain Y89_5531 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE Y89_5531 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5532 IPR000182 GNAT domain Y89_5532 IPR016181 Acyl-CoA N-acyltransferase Y89_5533 IPR002669 Urease accessory protein UreD Y89_5534 IPR002026 Urease, gamma/gamma-beta subunit Y89_5534 IPR012010 Urease, gamma subunit Y89_5534 IPR036463 Y89_5534 Y89_5535 IPR016181 Acyl-CoA N-acyltransferase Y89_5536 IPR002019 Urease, beta subunit Y89_5536 IPR036461 Y89_5536 Y89_5537 IPR005848 Urease, alpha subunit Y89_5537 IPR006680 Amidohydrolase 1 Y89_5537 IPR011059 Metal-dependent hydrolase, composite domain Y89_5537 IPR011612 Urease alpha-subunit, N-terminal domain Y89_5537 IPR017950 Urease active site Y89_5537 IPR029754 Urease nickel binding site Y89_5537 IPR032466 Y89_5537 Y89_5539 IPR000962 Zinc finger, DksA/TraR C4-type Y89_5539 IPR012783 Zinc finger, C4 DksA/TraR-type Y89_5539 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Y89_5539 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Y89_5541 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Y89_5541 IPR023687 Oxaloacetate decarboxylase, bacterial Y89_5542 IPR013126 Heat shock protein 70 family Y89_5542 IPR018181 Heat shock protein 70, conserved site Y89_5543 IPR011690 Phosphate-starvation-induced PsiF repeat Y89_5544 IPR005302 Molybdenum cofactor sulfurase, C-terminal Y89_5544 IPR011037 Pyruvate kinase-like, insert domain Y89_5545 IPR007450 Lipoprotein SmpA/OmlA Y89_5545 IPR037873 Y89_5545 Y89_5546 IPR011112 Rho termination factor, N-terminal Y89_5546 IPR036269 Y89_5546 Y89_5547 IPR000551 MerR-type HTH domain Y89_5547 IPR009061 DNA binding domain, putative Y89_5547 IPR010499 Bacterial transcription activator, effector binding Y89_5547 IPR011256 Regulatory factor, effector binding domain Y89_5547 IPR029441 Integron-associated effector binding protein Y89_5548 IPR007844 AsmA Y89_5549 IPR002024 Bacterioferritin Y89_5549 IPR008331 Ferritin/DPS protein domain Y89_5549 IPR009078 Ferritin-like superfamily Y89_5549 IPR012347 Ferritin-related Y89_5549 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold Y89_5551 IPR000572 Oxidoreductase, molybdopterin-binding domain Y89_5551 IPR036374 Y89_5551 Y89_5552 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit Y89_5552 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Y89_5552 IPR016174 Di-haem cytochrome, transmembrane Y89_5554 IPR001789 Signal transduction response regulator, receiver domain Y89_5554 IPR001867 Signal transduction response regulator, C-terminal Y89_5554 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response Y89_5554 IPR011006 CheY-like superfamily Y89_5554 IPR036388 Y89_5554 Y89_5555 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_5555 IPR003660 HAMP linker domain Y89_5555 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_5555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_5555 IPR006290 Heavy metal sensor kinase Y89_5555 IPR036097 Y89_5555 Y89_5555 IPR036890 Y89_5555 Y89_5556 IPR005828 General substrate transporter Y89_5556 IPR011701 Major facilitator superfamily Y89_5556 IPR036259 Y89_5556 Y89_5557 IPR005804 Fatty acid desaturase, type 1 Y89_5558 IPR001041 2Fe-2S ferredoxin-type domain Y89_5558 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_5558 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Y89_5558 IPR008333 Oxidoreductase, FAD-binding domain Y89_5558 IPR012675 Beta-grasp domain Y89_5558 IPR017938 Riboflavin synthase-like beta-barrel Y89_5558 IPR036010 Y89_5558 Y89_5558 IPR039261 Y89_5558 Y89_5559 IPR001647 DNA-binding HTH domain, TetR-type Y89_5559 IPR009057 Homeodomain-like Y89_5560 IPR004029 UreE urease accessory, N-terminal Y89_5560 IPR007864 Urease accessory protein UreE, C-terminal domain Y89_5560 IPR012406 Urease accessory protein UreE Y89_5560 IPR036118 Y89_5560 Y89_5560 IPR036675 Y89_5560 Y89_5561 IPR002639 Urease accessory protein UreF Y89_5561 IPR038277 Y89_5561 Y89_5562 IPR003495 CobW/HypB/UreG domain Y89_5562 IPR003593 AAA+ ATPase domain Y89_5562 IPR004400 Urease accessory protein UreG Y89_5562 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase Y89_5562 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5563 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein Y89_5564 IPR006860 FecR protein Y89_5564 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Y89_5564 IPR032508 Y89_5564 Y89_5564 IPR032623 Y89_5564 Y89_5565 IPR007627 RNA polymerase sigma-70 region 2 Y89_5565 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Y89_5565 IPR013324 RNA polymerase sigma factor, region 3/4 Y89_5565 IPR013325 RNA polymerase sigma factor, region 2 Y89_5565 IPR014284 RNA polymerase sigma-70 like domain Y89_5565 IPR036388 Y89_5565 Y89_5566 IPR000531 TonB-dependent receptor, beta-barrel Y89_5566 IPR010917 TonB-dependent receptor, conserved site Y89_5566 IPR011662 Secretin/TonB, short N-terminal Y89_5566 IPR012910 TonB-dependent receptor, plug Y89_5566 IPR037066 Y89_5566 Y89_5567 IPR005318 Outer membrane porin, bacterial Y89_5567 IPR023614 Porin domain Y89_5568 IPR015590 Aldehyde dehydrogenase domain Y89_5568 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_5568 IPR016161 Aldehyde/histidinol dehydrogenase Y89_5568 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_5568 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_5568 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_5571 IPR000399 TPP-binding enzyme, conserved site Y89_5571 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Y89_5571 IPR012000 Thiamine pyrophosphate enzyme, central domain Y89_5571 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Y89_5571 IPR029035 DHS-like NAD/FAD-binding domain Y89_5571 IPR029061 Thiamin diphosphate-binding fold Y89_5572 IPR000847 Transcription regulator HTH, LysR Y89_5572 IPR005119 LysR, substrate-binding Y89_5572 IPR036388 Y89_5572 Y89_5572 IPR036390 Y89_5572 Y89_5573 IPR005829 Sugar transporter, conserved site Y89_5573 IPR011701 Major facilitator superfamily Y89_5573 IPR036259 Y89_5573 Y89_5574 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site Y89_5574 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Y89_5574 IPR036922 Y89_5574 Y89_5575 IPR000951 Phthalate dioxygenase reductase Y89_5575 IPR001041 2Fe-2S ferredoxin-type domain Y89_5575 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Y89_5575 IPR012675 Beta-grasp domain Y89_5575 IPR017938 Riboflavin synthase-like beta-barrel Y89_5575 IPR036010 Y89_5575 Y89_5575 IPR039261 Y89_5575 Y89_5576 IPR000524 Transcription regulator HTH, GntR Y89_5576 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_5576 IPR011711 GntR, C-terminal Y89_5576 IPR036388 Y89_5576 Y89_5576 IPR036390 Y89_5576 Y89_5577 IPR002347 Glucose/ribitol dehydrogenase Y89_5577 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_5577 IPR036291 Y89_5577 Y89_5578 IPR003462 Ornithine cyclodeaminase/mu-crystallin Y89_5578 IPR023401 Ornithine cyclodeaminase, N-terminal Y89_5578 IPR036291 Y89_5578 Y89_5579 IPR003439 ABC transporter-like Y89_5579 IPR003593 AAA+ ATPase domain Y89_5579 IPR017871 ABC transporter, conserved site Y89_5579 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5579 IPR030660 Y89_5579 Y89_5580 IPR003439 ABC transporter-like Y89_5580 IPR003593 AAA+ ATPase domain Y89_5580 IPR017871 ABC transporter, conserved site Y89_5580 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5580 IPR032823 Y89_5580 Y89_5581 IPR001851 ABC transporter, permease Y89_5581 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal Y89_5582 IPR001851 ABC transporter, permease Y89_5583 IPR000709 Leu/Ile/Val-binding protein Y89_5583 IPR028081 Leucine-binding protein domain Y89_5583 IPR028082 Periplasmic binding protein-like I Y89_5584 IPR000847 Transcription regulator HTH, LysR Y89_5584 IPR005119 LysR, substrate-binding Y89_5584 IPR036388 Y89_5584 Y89_5584 IPR036390 Y89_5584 Y89_5585 IPR003660 HAMP linker domain Y89_5585 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_5585 IPR004090 Chemotaxis methyl-accepting receptor Y89_5585 IPR024478 4HB MCP domain Y89_5586 IPR015797 NUDIX hydrolase domain-like Y89_5586 IPR036388 Y89_5586 Y89_5586 IPR036390 Y89_5586 Y89_5587 IPR004821 Cytidyltransferase-like domain Y89_5587 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5588 IPR000868 Isochorismatase-like Y89_5588 IPR036380 Y89_5588 Y89_5589 IPR006406 Nicotinate phosphoribosyltransferase Y89_5589 IPR007229 Nicotinate phosphoribosyltransferase family Y89_5589 IPR036068 Y89_5589 Y89_5590 IPR003694 NAD(+) synthetase Y89_5590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5590 IPR022310 NAD/GMP synthase Y89_5590 IPR022926 NH(3)-dependent NAD(+) synthetase Y89_5591 IPR001087 Lipase, GDSL Y89_5591 IPR036514 Y89_5591 Y89_5592 IPR000923 Blue (type 1) copper domain Y89_5592 IPR008972 Cupredoxin Y89_5592 IPR014068 Azurin, proteobacteria Y89_5592 IPR028871 Blue (type 1) copper protein, binding site Y89_5593 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Y89_5593 IPR031100 Y89_5593 Y89_5594 IPR011055 Duplicated hybrid motif Y89_5594 IPR016047 Peptidase M23 Y89_5594 IPR018392 LysM domain Y89_5594 IPR036779 Y89_5594 Y89_5595 IPR006685 Mechanosensitive ion channel MscS Y89_5595 IPR010920 Like-Sm (LSM) domain Y89_5595 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Y89_5595 IPR011066 Mechanosensitive ion channel MscS, C-terminal Y89_5595 IPR023408 Y89_5595 Y89_5596 IPR002931 Transglutaminase-like Y89_5596 IPR013589 Bacterial transglutaminase-like, N-terminal Y89_5596 IPR038765 Y89_5596 Y89_5597 IPR007296 Domain of unknown function DUF403 Y89_5597 IPR025841 Circularly permuted ATP-grasp type 2 Y89_5598 IPR006638 Elongator protein 3/MiaB/NifB Y89_5598 IPR007197 Radical SAM Y89_5598 IPR013704 Uncharacterised protein family UPF0313, N-terminal Y89_5598 IPR020612 Methylthiotransferase, conserved site Y89_5598 IPR022946 Uncharacterised protein family UPF0313 Y89_5598 IPR023404 Radical SAM, alpha/beta horseshoe Y89_5598 IPR024560 Uncharacterised protein family UPF0313, C-terminal Y89_5599 IPR000160 GGDEF domain Y89_5599 IPR011622 7TM-DISM receptor, extracellular domain, type 2 Y89_5599 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Y89_5599 IPR029787 Nucleotide cyclase Y89_5600 IPR000821 Alanine racemase Y89_5600 IPR001608 Alanine racemase, N-terminal Y89_5600 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Y89_5600 IPR011079 Alanine racemase, C-terminal Y89_5600 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site Y89_5600 IPR029066 PLP-binding barrel Y89_5601 IPR007692 DNA helicase, DnaB type Y89_5601 IPR007693 DNA helicase, DnaB-like, N-terminal Y89_5601 IPR007694 DNA helicase, DnaB-like, C-terminal Y89_5601 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Y89_5601 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5601 IPR036185 Y89_5601 Y89_5602 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Y89_5602 IPR020069 Ribosomal protein L9, C-terminal Y89_5602 IPR020070 Ribosomal protein L9, N-terminal Y89_5602 IPR020594 Ribosomal protein L9, bacteria/chloroplast Y89_5602 IPR036791 Y89_5602 Y89_5602 IPR036935 Y89_5602 Y89_5604 IPR001648 Ribosomal protein S18 Y89_5604 IPR018275 Ribosomal protein S18, conserved site Y89_5604 IPR036870 Y89_5604 Y89_5605 IPR000529 Ribosomal protein S6 Y89_5605 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Y89_5605 IPR020814 Ribosomal protein S6, plastid/chloroplast Y89_5605 IPR020815 Ribosomal protein S6, conserved site Y89_5605 IPR035980 Y89_5605 Y89_5606 IPR001537 tRNA/rRNA methyltransferase, SpoU type Y89_5606 IPR004441 RNA methyltransferase TrmH family Y89_5606 IPR013123 RNA 2-O ribose methyltransferase, substrate binding Y89_5606 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB Y89_5606 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y89_5606 IPR029028 Alpha/beta knot methyltransferases Y89_5606 IPR029064 50S ribosomal protein L30e-like Y89_5607 IPR001900 Y89_5607 Y89_5607 IPR003029 Ribosomal protein S1, RNA-binding domain Y89_5607 IPR004476 Ribonuclease II/ribonuclease R Y89_5607 IPR011129 Cold shock protein Y89_5607 IPR011805 Ribonuclease R Y89_5607 IPR012340 Nucleic acid-binding, OB-fold Y89_5607 IPR013223 Ribonuclease B, N-terminal OB domain Y89_5607 IPR013668 Ribonuclease R winged-helix domain Y89_5607 IPR022966 Ribonuclease II/R, conserved site Y89_5607 IPR022967 RNA-binding domain, S1 Y89_5608 IPR001114 Adenylosuccinate synthetase Y89_5608 IPR018220 Adenylosuccinate synthase, active site Y89_5608 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5608 IPR033128 Y89_5608 Y89_5609 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Y89_5609 IPR004517 ATP phosphoribosyltransferase regulatory subunit Y89_5610 IPR019201 Protein of unknown function DUF2065 Y89_5611 IPR001107 Band 7 protein Y89_5611 IPR001972 Stomatin family Y89_5611 IPR010200 HflC Y89_5611 IPR036013 Y89_5611 Y89_5612 IPR001107 Band 7 protein Y89_5612 IPR001972 Stomatin family Y89_5612 IPR010201 HflK Y89_5612 IPR020980 Menbrane protein HflK, N-terminal Y89_5612 IPR036013 Y89_5612 Y89_5613 IPR006073 GTP binding domain Y89_5613 IPR016496 GTPase HflX Y89_5613 IPR025121 GTPase HflX N-terminal domain Y89_5613 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5613 IPR032305 Y89_5613 Y89_5613 IPR035647 Y89_5613 Y89_5614 IPR005001 Host factor Hfq Y89_5614 IPR010920 Like-Sm (LSM) domain Y89_5615 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase Y89_5615 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5616 IPR002099 DNA mismatch repair protein family Y89_5616 IPR013507 DNA mismatch repair protein, C-terminal Y89_5616 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_5616 IPR014762 DNA mismatch repair, conserved site Y89_5616 IPR014790 MutL, C-terminal, dimerisation Y89_5616 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_5616 IPR020667 DNA mismatch repair protein, MutL Y89_5616 IPR036890 Y89_5616 Y89_5616 IPR037198 Y89_5616 Y89_5617 IPR002508 Cell wall hydrolase/autolysin, catalytic Y89_5617 IPR018392 LysM domain Y89_5617 IPR021731 AMIN domain Y89_5617 IPR036779 Y89_5617 Y89_5618 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE Y89_5618 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5619 IPR000631 YjeF C-terminal domain Y89_5619 IPR004443 YjeF N-terminal domain Y89_5619 IPR029056 Ribokinase-like Y89_5619 IPR030677 Y89_5619 Y89_5619 IPR036652 Y89_5619 Y89_5620 IPR004453 Epoxyqueuosine reductase QueG Y89_5620 IPR009051 Alpha-helical ferredoxin Y89_5620 IPR013542 Domain of unknown function DUF1730 Y89_5620 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_5621 IPR012337 Ribonuclease H-like domain Y89_5621 IPR013520 Exonuclease, RNase T/DNA polymerase III Y89_5621 IPR022894 Oligoribonuclease Y89_5621 IPR036397 Y89_5621 Y89_5622 IPR004881 Ribosome biogenesis GTPase RsgA, putative Y89_5622 IPR010914 EngC GTPase Y89_5622 IPR012340 Nucleic acid-binding, OB-fold Y89_5622 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5623 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Y89_5623 IPR025713 Motility protein B, N-terminal domain Y89_5623 IPR036737 Y89_5623 Y89_5624 IPR000540 Flagellar motor protein MotA, conserved site Y89_5624 IPR002898 MotA/TolQ/ExbB proton channel Y89_5624 IPR022522 Flagellar motor stator, MotA Y89_5625 IPR013976 Metal-dependent hydrolase HDOD Y89_5626 IPR001307 Thiosulphate sulfurtransferase, conserved site Y89_5626 IPR001763 Rhodanese-like domain Y89_5626 IPR036873 Y89_5626 Y89_5627 IPR003817 Phosphatidylserine decarboxylase-related Y89_5627 IPR033177 Y89_5627 Y89_5627 IPR033178 Y89_5627 Y89_5629 IPR000014 PAS domain Y89_5629 IPR000160 GGDEF domain Y89_5629 IPR001633 EAL domain Y89_5629 IPR011006 CheY-like superfamily Y89_5629 IPR013767 PAS fold Y89_5629 IPR029787 Nucleotide cyclase Y89_5629 IPR035919 Y89_5629 Y89_5629 IPR035965 Y89_5629 Y89_5630 IPR023214 HAD-like domain Y89_5630 IPR036412 Y89_5630 Y89_5631 IPR019305 Uncharacterised protein family Smp Y89_5632 IPR007404 Protein of unknown function DUF457 Y89_5633 IPR005586 Protein of unknown function DUF330 Y89_5634 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Y89_5634 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative Y89_5634 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel Y89_5634 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain Y89_5634 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Y89_5634 IPR013760 DNA topoisomerase, type IIA-like domain Y89_5634 IPR035516 Y89_5634 Y89_5635 IPR011969 Peptidase aspartic, CHP02281 Y89_5635 IPR021109 Aspartic peptidase domain Y89_5636 IPR027372 Phytase-like domain Y89_5637 IPR001241 DNA topoisomerase, type IIA Y89_5637 IPR002288 DNA gyrase B subunit, C-terminal Y89_5637 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_5637 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative Y89_5637 IPR006171 Toprim domain Y89_5637 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Y89_5637 IPR013759 DNA topoisomerase, type IIA, central domain Y89_5637 IPR013760 DNA topoisomerase, type IIA-like domain Y89_5637 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_5637 IPR018522 DNA topoisomerase, type IIA, conserved site Y89_5637 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_5637 IPR036890 Y89_5637 Y89_5638 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA Y89_5638 IPR029058 Alpha/Beta hydrolase fold Y89_5639 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Y89_5639 IPR013622 Calcineurin-like phosphoesterase C-terminal Y89_5639 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA Y89_5639 IPR029052 Metallo-dependent phosphatase-like Y89_5640 IPR009659 Protein of unknown function DUF1249 Y89_5641 IPR000086 NUDIX hydrolase domain Y89_5641 IPR004385 Nucleoside diphosphate pyrophosphatase Y89_5641 IPR015797 NUDIX hydrolase domain-like Y89_5641 IPR020084 NUDIX hydrolase, conserved site Y89_5642 IPR021729 Domain of unknown function DUF3298 Y89_5642 IPR037126 Y89_5642 Y89_5643 IPR002817 Thiamine biosynthesis protein ThiC Y89_5643 IPR025747 ThiC-associated domain Y89_5643 IPR037509 Y89_5643 Y89_5643 IPR038521 Y89_5643 Y89_5644 IPR003423 Outer membrane efflux protein Y89_5644 IPR010130 Type I secretion outer membrane protein, TolC Y89_5645 IPR003680 Flavodoxin-like fold Y89_5645 IPR029039 Flavoprotein-like Y89_5646 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Y89_5646 IPR004839 Aminotransferase, class I/classII Y89_5646 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_5646 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_5646 IPR015424 Pyridoxal phosphate-dependent transferase Y89_5647 IPR000399 TPP-binding enzyme, conserved site Y89_5647 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Y89_5647 IPR012000 Thiamine pyrophosphate enzyme, central domain Y89_5647 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Y89_5647 IPR029035 DHS-like NAD/FAD-binding domain Y89_5647 IPR029061 Thiamin diphosphate-binding fold Y89_5648 IPR003781 CoA-binding Y89_5648 IPR013815 ATP-grasp fold, subdomain 1 Y89_5648 IPR016102 Succinyl-CoA synthetase-like Y89_5648 IPR032875 Y89_5648 Y89_5648 IPR036291 Y89_5648 Y89_5649 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_5649 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_5649 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_5649 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_5649 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_5649 IPR036250 Y89_5649 Y89_5649 IPR037069 Y89_5649 Y89_5650 IPR001753 Crotonase superfamily Y89_5650 IPR014748 Crontonase, C-terminal Y89_5650 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Y89_5650 IPR029045 ClpP/crotonase-like domain Y89_5651 IPR002293 Amino acid/polyamine transporter I Y89_5651 IPR004840 Amino acid permease, conserved site Y89_5651 IPR004841 Amino acid permease/ SLC12A domain Y89_5652 IPR001789 Signal transduction response regulator, receiver domain Y89_5652 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_5652 IPR003660 HAMP linker domain Y89_5652 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_5652 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_5652 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Y89_5652 IPR011006 CheY-like superfamily Y89_5652 IPR033414 Y89_5652 Y89_5652 IPR036097 Y89_5652 Y89_5652 IPR036641 Y89_5652 Y89_5652 IPR036890 Y89_5652 Y89_5653 IPR001638 Extracellular solute-binding protein, family 3 Y89_5654 IPR001789 Signal transduction response regulator, receiver domain Y89_5654 IPR001867 Signal transduction response regulator, C-terminal Y89_5654 IPR011006 CheY-like superfamily Y89_5654 IPR016032 Signal transduction response regulator, C-terminal effector Y89_5654 IPR036388 Y89_5654 Y89_5655 IPR001647 DNA-binding HTH domain, TetR-type Y89_5655 IPR009057 Homeodomain-like Y89_5655 IPR036271 Y89_5655 Y89_5655 IPR039538 Y89_5655 Y89_5656 IPR006059 Bacterial extracellular solute-binding, family 1 Y89_5657 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_5657 IPR013785 Aldolase-type TIM barrel Y89_5657 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_5657 IPR036188 Y89_5657 Y89_5658 IPR001387 Cro/C1-type helix-turn-helix domain Y89_5658 IPR010982 Lambda repressor-like, DNA-binding domain Y89_5658 IPR011051 RmlC-like cupin domain Y89_5658 IPR013096 Cupin 2, conserved barrel Y89_5658 IPR014710 RmlC-like jelly roll fold Y89_5659 IPR001296 Glycosyl transferase, family 1 Y89_5659 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal Y89_5659 IPR038107 Y89_5659 Y89_5660 IPR000847 Transcription regulator HTH, LysR Y89_5660 IPR005119 LysR, substrate-binding Y89_5660 IPR036388 Y89_5660 Y89_5660 IPR036390 Y89_5660 Y89_5661 IPR000390 Small multidrug resistance protein family Y89_5663 IPR023210 NADP-dependent oxidoreductase domain Y89_5663 IPR036812 Y89_5663 Y89_5665 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_5665 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_5665 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_5665 IPR036250 Y89_5665 Y89_5665 IPR037069 Y89_5665 Y89_5666 IPR006089 Acyl-CoA dehydrogenase, conserved site Y89_5666 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_5666 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_5666 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_5666 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_5666 IPR036250 Y89_5666 Y89_5666 IPR037069 Y89_5666 Y89_5667 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Y89_5667 IPR004821 Cytidyltransferase-like domain Y89_5667 IPR011611 Carbohydrate kinase PfkB Y89_5667 IPR011913 RfaE bifunctional protein, domain I Y89_5667 IPR011914 RfaE bifunctional protein, domain II Y89_5667 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5667 IPR023030 Bifunctional protein HldE Y89_5667 IPR029056 Ribokinase-like Y89_5668 IPR003439 ABC transporter-like Y89_5668 IPR003593 AAA+ ATPase domain Y89_5668 IPR011527 ABC transporter type 1, transmembrane domain Y89_5668 IPR011917 ABC transporter, lipid A export, MsbA Y89_5668 IPR017871 ABC transporter, conserved site Y89_5668 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5668 IPR036640 Y89_5668 Y89_5669 IPR011009 Protein kinase-like domain Y89_5670 IPR007016 O-antigen ligase-related Y89_5671 IPR001173 Glycosyltransferase 2-like Y89_5671 IPR029044 Nucleotide-diphospho-sugar transferases Y89_5675 IPR009977 Mig-14 Y89_5675 IPR016181 Acyl-CoA N-acyltransferase Y89_5676 IPR001296 Glycosyl transferase, family 1 Y89_5676 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Y89_5677 IPR003696 Carbamoyltransferase Y89_5677 IPR031730 Y89_5677 Y89_5677 IPR038152 Y89_5677 Y89_5678 IPR011009 Protein kinase-like domain Y89_5679 IPR011009 Protein kinase-like domain Y89_5679 IPR027023 Putative lipopolysaccharide kinase InaA Y89_5680 IPR008271 Serine/threonine-protein kinase, active site Y89_5680 IPR011009 Protein kinase-like domain Y89_5681 IPR011009 Protein kinase-like domain Y89_5681 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP Y89_5682 IPR001296 Glycosyl transferase, family 1 Y89_5683 IPR002201 Glycosyl transferase, family 9 Y89_5683 IPR011908 Lipopolysaccharide heptosyltransferase I Y89_5684 IPR002201 Glycosyl transferase, family 9 Y89_5684 IPR011910 Lipopolysaccharide heptosyltransferase II Y89_5685 IPR001544 Aminotransferase, class IV Y89_5685 IPR005785 Branched-chain amino acid aminotransferase I Y89_5685 IPR018300 Aminotransferase, class IV, conserved site Y89_5685 IPR036038 Y89_5685 Y89_5686 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain Y89_5686 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase Y89_5686 IPR023057 Glutamate-ammonia-ligase adenylyltransferase Y89_5687 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type Y89_5687 IPR005474 Transketolase, N-terminal Y89_5687 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Y89_5687 IPR029061 Thiamin diphosphate-binding fold Y89_5688 IPR000089 Biotin/lipoyl attachment Y89_5688 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Y89_5688 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Y89_5688 IPR004167 E3 binding Y89_5688 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex Y89_5688 IPR011053 Single hybrid motif Y89_5688 IPR023213 Chloramphenicol acetyltransferase-like domain Y89_5688 IPR036625 Y89_5688 Y89_5689 IPR000014 PAS domain Y89_5689 IPR000160 GGDEF domain Y89_5689 IPR001610 PAC motif Y89_5689 IPR001633 EAL domain Y89_5689 IPR003018 GAF domain Y89_5689 IPR029016 GAF domain-like Y89_5689 IPR029787 Nucleotide cyclase Y89_5689 IPR035919 Y89_5689 Y89_5689 IPR035965 Y89_5689 Y89_5690 IPR002569 Peptide methionine sulphoxide reductase MsrA Y89_5690 IPR036509 Y89_5690 Y89_5691 IPR007473 Ribosomal RNA large subunit methyltransferase J Y89_5691 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5692 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_5692 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_5692 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_5692 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_5692 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Y89_5692 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Y89_5692 IPR036250 Y89_5692 Y89_5692 IPR037069 Y89_5692 Y89_5693 IPR005170 Transporter-associated domain Y89_5693 IPR006037 Regulator of K+ conductance, C-terminal Y89_5693 IPR006153 Cation/H+ exchanger Y89_5693 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_5693 IPR023729 K(+)/H(+) antiporter NhaP2 Y89_5693 IPR036318 Y89_5693 Y89_5693 IPR036721 Y89_5693 Y89_5693 IPR038770 Y89_5693 Y89_5694 IPR006685 Mechanosensitive ion channel MscS Y89_5694 IPR006686 Mechanosensitive ion channel MscS, conserved site Y89_5694 IPR010920 Like-Sm (LSM) domain Y89_5694 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Y89_5694 IPR011066 Mechanosensitive ion channel MscS, C-terminal Y89_5694 IPR023408 Y89_5694 Y89_5694 IPR024393 Mechanosensitive ion channel MscS, porin domain Y89_5694 IPR025692 Mechanosensitive ion channel inner membrane domain 1 Y89_5695 IPR003846 Uncharacterised protein family UPF0061 Y89_5696 IPR002781 Transmembrane protein TauE like Y89_5697 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Y89_5697 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase Y89_5697 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_5697 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_5697 IPR015424 Pyridoxal phosphate-dependent transferase Y89_5698 IPR027961 Protein of unknown function DUF4442 Y89_5698 IPR029069 HotDog domain Y89_5699 IPR006015 Universal stress protein A Y89_5699 IPR006016 UspA Y89_5699 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5700 IPR025669 AAA domain Y89_5700 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5701 IPR000847 Transcription regulator HTH, LysR Y89_5701 IPR005119 LysR, substrate-binding Y89_5701 IPR036388 Y89_5701 Y89_5701 IPR036390 Y89_5701 Y89_5702 IPR005829 Sugar transporter, conserved site Y89_5702 IPR011701 Major facilitator superfamily Y89_5702 IPR036259 Y89_5702 Y89_5703 IPR002347 Glucose/ribitol dehydrogenase Y89_5703 IPR036291 Y89_5703 Y89_5704 IPR009057 Homeodomain-like Y89_5704 IPR018060 DNA binding HTH domain, AraC-type Y89_5704 IPR032687 Y89_5704 Y89_5706 IPR000257 Uroporphyrinogen decarboxylase (URO-D) Y89_5706 IPR006361 Uroporphyrinogen decarboxylase HemE Y89_5706 IPR038071 Y89_5706 Y89_5707 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 Y89_5707 IPR009051 Alpha-helical ferredoxin Y89_5707 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_5707 IPR028261 Dihydroprymidine dehydrogenase domain II Y89_5707 IPR036188 Y89_5707 Y89_5708 IPR002489 Glutamate synthase, alpha subunit, C-terminal Y89_5708 IPR002932 Glutamate synthase domain Y89_5708 IPR006982 Glutamate synthase, central-N Y89_5708 IPR013785 Aldolase-type TIM barrel Y89_5708 IPR017932 Glutamine amidotransferase type 2 domain Y89_5708 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_5708 IPR036485 Y89_5708 Y89_5709 IPR003593 AAA+ ATPase domain Y89_5709 IPR007730 Sporulation-related domain Y89_5709 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5709 IPR036680 Y89_5709 Y89_5710 IPR016037 3-dehydroquinate synthase AroB Y89_5710 IPR030960 Y89_5710 Y89_5710 IPR030963 Y89_5710 Y89_5711 IPR000623 Shikimate kinase/Threonine synthase-like 1 Y89_5711 IPR023000 Shikimate kinase, conserved site Y89_5711 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5711 IPR031322 Y89_5711 Y89_5712 IPR001775 GspD/PilQ family Y89_5712 IPR004845 Type II secretion system GspD, conserved site Y89_5712 IPR004846 Type II/III secretion system Y89_5712 IPR005644 NolW-like Y89_5712 IPR011662 Secretin/TonB, short N-terminal Y89_5712 IPR013355 Type IV pilus secretin PilQ Y89_5712 IPR021731 AMIN domain Y89_5712 IPR038591 Y89_5712 Y89_5713 IPR007446 Pilus assembly protein PilP Y89_5714 IPR007445 Pilus assembly protein, PilO Y89_5714 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Y89_5716 IPR003494 SHS2 domain inserted in FtsA Y89_5716 IPR005883 Type IV pilus assembly protein PilM Y89_5717 IPR001264 Glycosyl transferase, family 51 Y89_5717 IPR001460 Penicillin-binding protein, transpeptidase Y89_5717 IPR012338 Beta-lactamase/transpeptidase-like Y89_5717 IPR023346 Lysozyme-like domain Y89_5717 IPR031376 Y89_5717 Y89_5717 IPR036950 Y89_5717 Y89_5718 IPR001891 Malic oxidoreductase Y89_5718 IPR012301 Malic enzyme, N-terminal domain Y89_5718 IPR012302 Malic enzyme, NAD-binding Y89_5718 IPR015884 Malic enzyme, conserved site Y89_5718 IPR036291 Y89_5718 Y89_5718 IPR037062 Y89_5718 Y89_5719 IPR001915 Peptidase M48 Y89_5720 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Y89_5720 IPR035437 Y89_5720 Y89_5721 IPR002150 Ribosomal protein L31 Y89_5721 IPR027491 Ribosomal protein L31 type A Y89_5721 IPR034704 Y89_5721 Y89_5722 IPR001650 Helicase, C-terminal Y89_5722 IPR005259 Primosomal protein n Y89_5722 IPR011545 DEAD/DEAH box helicase domain Y89_5722 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_5722 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5723 IPR001278 Arginine-tRNA ligase Y89_5723 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Y89_5723 IPR005148 Arginyl tRNA synthetase N-terminal domain Y89_5723 IPR008909 DALR anticodon binding Y89_5723 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Y89_5723 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5723 IPR035684 Y89_5723 Y89_5723 IPR036695 Y89_5723 Y89_5724 IPR007730 Sporulation-related domain Y89_5724 IPR036680 Y89_5724 Y89_5725 IPR001353 Proteasome, subunit alpha/beta Y89_5725 IPR022281 ATP-dependent protease, HslV subunit Y89_5725 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_5726 IPR003593 AAA+ ATPase domain Y89_5726 IPR003959 ATPase, AAA-type, core Y89_5726 IPR004491 Heat shock protein HslU Y89_5726 IPR019489 Clp ATPase, C-terminal Y89_5726 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5727 IPR010376 Domain of unknown function, DUF971 Y89_5727 IPR038492 Y89_5727 Y89_5728 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain Y89_5728 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II Y89_5728 IPR029058 Alpha/Beta hydrolase fold Y89_5729 IPR000073 Alpha/beta hydrolase fold-1 Y89_5729 IPR011942 Poly(3-hydroxyalkanoate) depolymerase Y89_5729 IPR029058 Alpha/Beta hydrolase fold Y89_5730 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain Y89_5730 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II Y89_5730 IPR029058 Alpha/Beta hydrolase fold Y89_5731 IPR001647 DNA-binding HTH domain, TetR-type Y89_5731 IPR009057 Homeodomain-like Y89_5731 IPR025722 Bacterial transcriptional repressor TetR Y89_5732 IPR008769 Poly granule associated Y89_5733 IPR008769 Poly granule associated Y89_5734 IPR013433 Putative polyhydroxyalkanoic acid system protein Y89_5735 IPR004033 UbiE/COQ5 methyltransferase Y89_5735 IPR023576 UbiE/COQ5 methyltransferase, conserved site Y89_5735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5736 IPR003033 SCP2 sterol-binding domain Y89_5736 IPR036527 Y89_5736 Y89_5737 IPR004147 UbiB domain Y89_5737 IPR010232 Probable protein kinase UbiB Y89_5737 IPR011009 Protein kinase-like domain Y89_5738 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain Y89_5738 IPR026660 Phosphoribosyl-AMP cyclohydrolase Y89_5738 IPR038019 Y89_5738 Y89_5739 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase Y89_5739 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like Y89_5740 IPR003369 Sec-independent protein translocase protein TatA/B/E Y89_5740 IPR006312 Sec-independent protein translocase protein TatA/E Y89_5741 IPR003369 Sec-independent protein translocase protein TatA/B/E Y89_5741 IPR018448 Twin-arginine translocation protein TatB Y89_5742 IPR002033 Sec-independent periplasmic protein translocase TatC Y89_5742 IPR019820 Sec-independent periplasmic protein translocase, conserved site Y89_5743 IPR006700 Ribosomal RNA small subunit methyltransferase E Y89_5743 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y89_5743 IPR029028 Alpha/beta knot methyltransferases Y89_5744 IPR003660 HAMP linker domain Y89_5744 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Y89_5744 IPR004090 Chemotaxis methyl-accepting receptor Y89_5744 IPR032255 Y89_5744 Y89_5745 IPR005361 Uncharacterised protein family UPF0158 Y89_5746 IPR003439 ABC transporter-like Y89_5746 IPR003593 AAA+ ATPase domain Y89_5746 IPR017871 ABC transporter, conserved site Y89_5746 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5746 IPR030679 Y89_5746 Y89_5747 IPR000515 MetI-like domain Y89_5747 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_5747 IPR035906 Y89_5747 Y89_5748 IPR001320 Ionotropic glutamate receptor Y89_5748 IPR001638 Extracellular solute-binding protein, family 3 Y89_5748 IPR018313 Extracellular solute-binding protein, family 3, conserved site Y89_5749 IPR001173 Glycosyltransferase 2-like Y89_5749 IPR023725 Glucan biosynthesis glucosyltransferase H Y89_5749 IPR029044 Nucleotide-diphospho-sugar transferases Y89_5750 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal Y89_5750 IPR011013 Galactose mutarotase-like domain Y89_5750 IPR013783 Immunoglobulin-like fold Y89_5750 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D Y89_5750 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup Y89_5750 IPR014756 Immunoglobulin E-set Y89_5750 IPR023704 Glucan biosynthesis protein G Y89_5751 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase Y89_5751 IPR023509 D-Tyr tRNAtyr deacylase-like domain Y89_5752 IPR000073 Alpha/beta hydrolase fold-1 Y89_5752 IPR002410 Peptidase S33 Y89_5752 IPR005944 Proline iminopeptidase Y89_5752 IPR029058 Alpha/Beta hydrolase fold Y89_5753 IPR000086 NUDIX hydrolase domain Y89_5753 IPR015797 NUDIX hydrolase domain-like Y89_5754 IPR001638 Extracellular solute-binding protein, family 3 Y89_5755 IPR006175 YjgF/Yer057p/UK114 family Y89_5755 IPR035959 Y89_5755 Y89_5756 IPR006076 FAD dependent oxidoreductase Y89_5756 IPR023080 D-amino acid dehydrogenase small subunit, DadA Y89_5756 IPR036188 Y89_5756 Y89_5757 IPR000847 Transcription regulator HTH, LysR Y89_5757 IPR005119 LysR, substrate-binding Y89_5757 IPR036388 Y89_5757 Y89_5757 IPR036390 Y89_5757 Y89_5758 IPR006597 Sel1-like Y89_5758 IPR011990 Tetratricopeptide-like helical domain Y89_5759 IPR006597 Sel1-like Y89_5759 IPR011990 Tetratricopeptide-like helical domain Y89_5760 IPR001736 Phospholipase D/Transphosphatidylase Y89_5761 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Y89_5761 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Y89_5761 IPR037026 Y89_5761 Y89_5762 IPR007709 N-formylglutamate amidohydrolase Y89_5762 IPR010247 N-formylglutamate deformylase Y89_5763 IPR005920 Imidazolonepropionase Y89_5763 IPR006680 Amidohydrolase 1 Y89_5763 IPR011059 Metal-dependent hydrolase, composite domain Y89_5763 IPR032466 Y89_5763 Y89_5764 IPR001106 Aromatic amino acid lyase Y89_5764 IPR008948 L-Aspartase-like Y89_5764 IPR024083 Fumarase/histidase, N-terminal Y89_5766 IPR000515 MetI-like domain Y89_5766 IPR035906 Y89_5766 Y89_5767 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain Y89_5768 IPR002293 Amino acid/polyamine transporter I Y89_5768 IPR004840 Amino acid permease, conserved site Y89_5768 IPR004841 Amino acid permease/ SLC12A domain Y89_5769 IPR001106 Aromatic amino acid lyase Y89_5769 IPR005921 Histidine ammonia-lyase Y89_5769 IPR008948 L-Aspartase-like Y89_5769 IPR022313 Phenylalanine/histidine ammonia-lyases, active site Y89_5769 IPR024083 Fumarase/histidase, N-terminal Y89_5770 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin Y89_5770 IPR026030 Purine-cytosine permease Y89_5770 IPR038271 Y89_5770 Y89_5771 IPR023636 Urocanase conserved site Y89_5771 IPR023637 Urocanase Y89_5771 IPR035085 Y89_5771 Y89_5771 IPR035400 Y89_5771 Y89_5771 IPR035401 Y89_5771 Y89_5771 IPR036190 Y89_5771 Y89_5771 IPR038364 Y89_5771 Y89_5773 IPR005804 Fatty acid desaturase, type 1 Y89_5774 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain Y89_5775 IPR010282 Uncharacterised protein family HutD/Ves Y89_5775 IPR011051 RmlC-like cupin domain Y89_5775 IPR014710 RmlC-like jelly roll fold Y89_5776 IPR000524 Transcription regulator HTH, GntR Y89_5776 IPR010248 Histidine utilization repressor Y89_5776 IPR011663 UbiC transcription regulator-associated Y89_5776 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Y89_5776 IPR036388 Y89_5776 Y89_5776 IPR036390 Y89_5776 Y89_5777 IPR006680 Amidohydrolase 1 Y89_5777 IPR010252 Formiminoglutamate deiminase Y89_5777 IPR011059 Metal-dependent hydrolase, composite domain Y89_5777 IPR032466 Y89_5777 Y89_5778 IPR000566 Lipocalin/cytosolic fatty-acid binding domain Y89_5778 IPR002446 Lipocalin, bacterial Y89_5778 IPR012674 Calycin Y89_5778 IPR022271 Lipocalin, ApoD type Y89_5778 IPR022272 Lipocalin family conserved site Y89_5779 IPR007450 Lipoprotein SmpA/OmlA Y89_5780 IPR010323 Protein of unknown function DUF924 Y89_5780 IPR011990 Tetratricopeptide-like helical domain Y89_5781 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase Y89_5781 IPR028343 Fructose-1,6-bisphosphatase Y89_5781 IPR033391 Y89_5781 Y89_5782 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_5782 IPR004361 Glyoxalase I Y89_5782 IPR018146 Glyoxalase I, conserved site Y89_5782 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_5783 IPR001087 Lipase, GDSL Y89_5783 IPR005546 Autotransporter beta-domain Y89_5783 IPR008265 Lipase, GDSL, active site Y89_5783 IPR017186 Lipase, autotransporter EstA Y89_5783 IPR036514 Y89_5783 Y89_5783 IPR036709 Y89_5783 Y89_5784 IPR025060 Protein of unknown function DUF3999 Y89_5785 IPR019286 Protein of unknown function DUF2339, transmembrane Y89_5786 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5787 IPR000551 MerR-type HTH domain Y89_5787 IPR009061 DNA binding domain, putative Y89_5788 IPR000640 Translation elongation factor EFG, V domain Y89_5788 IPR000795 Elongation factor, GTP-binding domain Y89_5788 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Y89_5788 IPR005225 Small GTP-binding protein domain Y89_5788 IPR006298 GTP-binding protein TypA Y89_5788 IPR009000 Translation protein, beta-barrel domain Y89_5788 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5788 IPR031157 Y89_5788 Y89_5788 IPR035647 Y89_5788 Y89_5789 IPR003720 tRNA sulfurtransferase ThiI Y89_5789 IPR004114 THUMP Y89_5789 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_5789 IPR020536 Thil, AANH domain Y89_5789 IPR026340 Thiazole biosynthesis domain Y89_5789 IPR036873 Y89_5789 Y89_5790 IPR001637 Glutamine synthetase class-I, adenylation site Y89_5790 IPR004809 Glutamine synthetase type I Y89_5790 IPR008146 Glutamine synthetase, catalytic domain Y89_5790 IPR008147 Glutamine synthetase, beta-Grasp Y89_5790 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_5790 IPR027302 Glutamine synthetase, N-terminal conserved site Y89_5790 IPR027303 Glutamine synthetase, glycine-rich site Y89_5790 IPR036651 Y89_5790 Y89_5792 IPR006685 Mechanosensitive ion channel MscS Y89_5792 IPR010920 Like-Sm (LSM) domain Y89_5792 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Y89_5792 IPR011066 Mechanosensitive ion channel MscS, C-terminal Y89_5792 IPR023408 Y89_5792 Y89_5793 IPR025392 Domain of unknown function DUF4124 Y89_5794 IPR025392 Domain of unknown function DUF4124 Y89_5795 IPR000014 PAS domain Y89_5795 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_5795 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_5795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_5795 IPR013767 PAS fold Y89_5795 IPR035965 Y89_5795 Y89_5795 IPR036097 Y89_5795 Y89_5795 IPR036890 Y89_5795 Y89_5796 IPR001789 Signal transduction response regulator, receiver domain Y89_5796 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_5796 IPR002197 DNA binding HTH domain, Fis-type Y89_5796 IPR003593 AAA+ ATPase domain Y89_5796 IPR009057 Homeodomain-like Y89_5796 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) Y89_5796 IPR011006 CheY-like superfamily Y89_5796 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_5796 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_5796 IPR025944 Sigma-54 interaction domain, conserved site Y89_5796 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5799 IPR001537 tRNA/rRNA methyltransferase, SpoU type Y89_5799 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase Y89_5799 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Y89_5799 IPR029028 Alpha/beta knot methyltransferases Y89_5800 IPR003708 Bacterial protein export chaperone SecB Y89_5800 IPR035958 Y89_5800 Y89_5801 IPR002109 Glutaredoxin Y89_5801 IPR011767 Glutaredoxin active site Y89_5801 IPR011900 Glutaredoxin, GrxC Y89_5801 IPR014025 Glutaredoxin subgroup Y89_5801 IPR036249 Y89_5801 Y89_5802 IPR001763 Rhodanese-like domain Y89_5802 IPR036873 Y89_5802 Y89_5803 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Y89_5803 IPR006124 Metalloenzyme Y89_5803 IPR011258 BPG-independent PGAM, N-terminal Y89_5803 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Y89_5803 IPR017850 Alkaline-phosphatase-like, core domain Y89_5803 IPR036646 Y89_5803 Y89_5804 IPR003675 CAAX amino terminal protease Y89_5805 IPR011055 Duplicated hybrid motif Y89_5805 IPR016047 Peptidase M23 Y89_5806 IPR001478 PDZ domain Y89_5806 IPR004447 C-terminal-processing peptidase S41A Y89_5806 IPR005151 Tail specific protease Y89_5806 IPR029045 ClpP/crotonase-like domain Y89_5806 IPR036034 Y89_5806 Y89_5807 IPR006837 Protein of unknown function DUF610, YibQ Y89_5807 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Y89_5809 IPR001638 Extracellular solute-binding protein, family 3 Y89_5810 IPR001638 Extracellular solute-binding protein, family 3 Y89_5811 IPR001638 Extracellular solute-binding protein, family 3 Y89_5812 IPR004651 Histidine biosynthesis, HisF Y89_5812 IPR006062 Histidine biosynthesis Y89_5812 IPR011060 Ribulose-phosphate binding barrel Y89_5812 IPR013785 Aldolase-type TIM barrel Y89_5813 IPR006062 Histidine biosynthesis Y89_5813 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA Y89_5813 IPR011060 Ribulose-phosphate binding barrel Y89_5813 IPR013785 Aldolase-type TIM barrel Y89_5813 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Y89_5814 IPR018680 Protein of unknown function DUF2164 Y89_5815 IPR010139 Imidazole glycerol phosphate synthase, subunit H Y89_5815 IPR017926 Glutamine amidotransferase Y89_5815 IPR029062 Class I glutamine amidotransferase-like Y89_5816 IPR000807 Imidazoleglycerol-phosphate dehydratase Y89_5816 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site Y89_5816 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_5816 IPR038494 Y89_5816 Y89_5817 IPR000182 GNAT domain Y89_5817 IPR016181 Acyl-CoA N-acyltransferase Y89_5820 IPR007844 AsmA Y89_5821 IPR000445 Helix-hairpin-helix motif Y89_5821 IPR003265 HhH-GPD domain Y89_5821 IPR004036 Endonuclease III-like, conserved site-2 Y89_5821 IPR005760 A/G-specific adenine glycosylase MutY Y89_5821 IPR011257 DNA glycosylase Y89_5821 IPR015797 NUDIX hydrolase domain-like Y89_5821 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Y89_5821 IPR029119 MutY, C-terminal Y89_5822 IPR007457 Fe(II) trafficking protein YggX Y89_5822 IPR036766 Y89_5822 Y89_5823 IPR000683 Oxidoreductase, N-terminal Y89_5823 IPR004104 Oxidoreductase, C-terminal Y89_5823 IPR036291 Y89_5823 Y89_5824 IPR002347 Glucose/ribitol dehydrogenase Y89_5824 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_5824 IPR036291 Y89_5824 Y89_5825 IPR007462 Protein of unknown function DUF502 Y89_5826 IPR003439 ABC transporter-like Y89_5826 IPR003593 AAA+ ATPase domain Y89_5826 IPR017871 ABC transporter, conserved site Y89_5826 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5826 IPR030679 Y89_5826 Y89_5827 IPR001638 Extracellular solute-binding protein, family 3 Y89_5827 IPR018313 Extracellular solute-binding protein, family 3, conserved site Y89_5828 IPR000515 MetI-like domain Y89_5828 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_5828 IPR035906 Y89_5828 Y89_5829 IPR000515 MetI-like domain Y89_5829 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Y89_5829 IPR035906 Y89_5829 Y89_5830 IPR025714 Methyltransferase domain Y89_5830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_5831 IPR000835 MarR-type HTH domain Y89_5831 IPR023187 Transcriptional regulator MarR-type, conserved site Y89_5831 IPR036388 Y89_5831 Y89_5831 IPR036390 Y89_5831 Y89_5832 IPR003423 Outer membrane efflux protein Y89_5832 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Y89_5833 IPR006143 RND efflux pump, membrane fusion protein Y89_5833 IPR032317 Y89_5833 Y89_5834 IPR004638 Drug resistance transporter EmrB/QacA subfamily Y89_5834 IPR011701 Major facilitator superfamily Y89_5834 IPR036259 Y89_5834 Y89_5836 IPR006441 Bacteriophage P2, GpN, major capsid Y89_5837 IPR007684 Zinc finger, Ogr/Delta-type Y89_5839 IPR009270 Domain of unknown function DUF927 Y89_5840 IPR006171 Toprim domain Y89_5840 IPR036977 Y89_5840 Y89_5842 IPR009061 DNA binding domain, putative Y89_5845 IPR009061 DNA binding domain, putative Y89_5846 IPR002104 Integrase, catalytic Y89_5846 IPR010998 Integrase, Lambda-type, N-terminal Y89_5846 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_5846 IPR013762 Integrase-like, catalytic core Y89_5847 IPR005888 dTDP-glucose 4,6-dehydratase Y89_5847 IPR016040 NAD(P)-binding domain Y89_5847 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_5847 IPR036291 Y89_5847 Y89_5848 IPR005913 dTDP-4-dehydrorhamnose reductase Y89_5848 IPR029903 Y89_5848 Y89_5848 IPR036291 Y89_5848 Y89_5849 IPR005835 Nucleotidyl transferase Y89_5849 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form Y89_5849 IPR029044 Nucleotide-diphospho-sugar transferases Y89_5850 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related Y89_5850 IPR011051 RmlC-like cupin domain Y89_5850 IPR014710 RmlC-like jelly roll fold Y89_5851 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_5851 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_5851 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_5851 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) Y89_5851 IPR029151 Periplasmic sensor domain-like Y89_5851 IPR033479 Y89_5851 Y89_5851 IPR036097 Y89_5851 Y89_5851 IPR036890 Y89_5851 Y89_5852 IPR001789 Signal transduction response regulator, receiver domain Y89_5852 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_5852 IPR002197 DNA binding HTH domain, Fis-type Y89_5852 IPR003593 AAA+ ATPase domain Y89_5852 IPR009057 Homeodomain-like Y89_5852 IPR011006 CheY-like superfamily Y89_5852 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_5852 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_5852 IPR025944 Sigma-54 interaction domain, conserved site Y89_5852 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5853 IPR004682 TRAP dicarboxylate transporter Y89_5853 IPR018389 Bacterial extracellular solute-binding protein, family 7 Y89_5853 IPR038404 Y89_5853 Y89_5854 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component Y89_5855 IPR004681 TRAP transporter permease protein Y89_5855 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Y89_5856 IPR002293 Amino acid/polyamine transporter I Y89_5856 IPR004754 Amino acid antiporter Y89_5856 IPR022461 Arginine/ornithine antiporter Y89_5857 IPR003876 Arginine deiminase Y89_5858 IPR002292 Ornithine/putrescine carbamoyltransferase Y89_5858 IPR006130 Aspartate/ornithine carbamoyltransferase Y89_5858 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Y89_5858 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Y89_5858 IPR024904 Ornithine carbamoyltransferase Y89_5858 IPR036901 Y89_5858 Y89_5859 IPR001048 Aspartate/glutamate/uridylate kinase Y89_5859 IPR003964 Carbamate kinase Y89_5859 IPR036393 Y89_5859 Y89_5860 IPR014030 Beta-ketoacyl synthase, N-terminal Y89_5860 IPR014031 Beta-ketoacyl synthase, C-terminal Y89_5860 IPR016039 Thiolase-like Y89_5860 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Y89_5861 IPR000760 Inositol monophosphatase Y89_5861 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial Y89_5861 IPR020583 Inositol monophosphatase, metal-binding site Y89_5862 IPR000086 NUDIX hydrolase domain Y89_5862 IPR015797 NUDIX hydrolase domain-like Y89_5862 IPR020084 NUDIX hydrolase, conserved site Y89_5863 IPR006439 HAD hydrolase, subfamily IA Y89_5863 IPR023214 HAD-like domain Y89_5863 IPR036412 Y89_5863 Y89_5864 IPR007055 BON domain Y89_5864 IPR018392 LysM domain Y89_5864 IPR036779 Y89_5864 Y89_5865 IPR000847 Transcription regulator HTH, LysR Y89_5865 IPR005119 LysR, substrate-binding Y89_5865 IPR036388 Y89_5865 Y89_5865 IPR036390 Y89_5865 Y89_5866 IPR003786 Protein FdhD Y89_5866 IPR016193 Cytidine deaminase-like Y89_5867 IPR006656 Molybdopterin oxidoreductase Y89_5867 IPR006657 Molydopterin dinucleotide-binding domain Y89_5867 IPR009010 Aspartate decarboxylase-like domain Y89_5867 IPR010046 Oxidoreductase alpha (molybdopterin) subunit Y89_5869 IPR039567 Y89_5869 Y89_5870 IPR003751 Carbon storage regulator Y89_5870 IPR036107 Y89_5870 Y89_5871 IPR002701 Chorismate mutase Y89_5871 IPR008240 Chorismate mutase, periplasmic Y89_5871 IPR036263 Y89_5871 Y89_5872 IPR006683 Thioesterase superfamily Y89_5872 IPR029069 HotDog domain Y89_5873 IPR001670 Alcohol dehydrogenase, iron-type Y89_5873 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Y89_5874 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Y89_5874 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Y89_5874 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Y89_5874 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Y89_5874 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Y89_5874 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Y89_5874 IPR036250 Y89_5874 Y89_5874 IPR037069 Y89_5874 Y89_5875 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Y89_5875 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Y89_5875 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_5875 IPR036291 Y89_5875 Y89_5876 IPR000847 Transcription regulator HTH, LysR Y89_5876 IPR005119 LysR, substrate-binding Y89_5876 IPR036388 Y89_5876 Y89_5876 IPR036390 Y89_5876 Y89_5877 IPR000415 Nitroreductase-like Y89_5877 IPR029479 Nitroreductase Y89_5879 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising Y89_5879 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal Y89_5879 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal Y89_5879 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site Y89_5880 IPR000397 Heat shock protein Hsp33 Y89_5880 IPR016153 Heat shock protein Hsp33, N-terminal Y89_5880 IPR016154 Heat shock protein Hsp33, C-terminal Y89_5880 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain Y89_5881 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Y89_5881 IPR036938 Y89_5881 Y89_5882 IPR002942 RNA-binding S4 domain Y89_5882 IPR025708 Heat shock protein 15 Y89_5882 IPR036986 Y89_5882 Y89_5883 IPR021109 Aspartic peptidase domain Y89_5884 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX Y89_5884 IPR013651 ATP-grasp fold, RimK-type Y89_5884 IPR013815 ATP-grasp fold, subdomain 1 Y89_5884 IPR023533 Ribosomal S6 modification enzyme RimK Y89_5885 IPR003507 Muramoyl-tetrapeptide carboxypeptidase Y89_5885 IPR027461 LD-carboxypeptidase A, C-terminal domain Y89_5885 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain Y89_5885 IPR029062 Class I glutamine amidotransferase-like Y89_5886 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_5886 IPR003660 HAMP linker domain Y89_5886 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_5886 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_5886 IPR036097 Y89_5886 Y89_5886 IPR036890 Y89_5886 Y89_5887 IPR001789 Signal transduction response regulator, receiver domain Y89_5887 IPR001867 Signal transduction response regulator, C-terminal Y89_5887 IPR011006 CheY-like superfamily Y89_5887 IPR016032 Signal transduction response regulator, C-terminal effector Y89_5887 IPR036388 Y89_5887 Y89_5888 IPR003029 Ribosomal protein S1, RNA-binding domain Y89_5888 IPR006641 YqgF/RNase H-like domain Y89_5888 IPR010994 RuvA domain 2-like Y89_5888 IPR012337 Ribonuclease H-like domain Y89_5888 IPR012340 Nucleic acid-binding, OB-fold Y89_5888 IPR018974 Tex-like protein, N-terminal Y89_5888 IPR022967 RNA-binding domain, S1 Y89_5888 IPR023319 Tex-like protein, HTH domain Y89_5888 IPR023323 Tex-like domain Y89_5888 IPR032639 Y89_5888 Y89_5888 IPR037027 Y89_5888 Y89_5889 IPR003736 Phenylacetic acid degradation-related domain Y89_5889 IPR006683 Thioesterase superfamily Y89_5889 IPR029069 HotDog domain Y89_5890 IPR006334 Glutamate--cysteine ligase, monofunctional Y89_5890 IPR007370 Glutamate--cysteine ligase Y89_5890 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_5891 IPR000182 GNAT domain Y89_5891 IPR001048 Aspartate/glutamate/uridylate kinase Y89_5891 IPR010167 Amino-acid N-acetyltransferase (ArgA) Y89_5891 IPR016181 Acyl-CoA N-acyltransferase Y89_5891 IPR036393 Y89_5891 Y89_5892 IPR002771 Multiple antibiotic resistance (MarC)-related Y89_5893 IPR002933 Peptidase M20 Y89_5893 IPR010169 Acetylornithine deacetylase (ArgE) Y89_5893 IPR011650 Peptidase M20, dimerisation domain Y89_5893 IPR036264 Y89_5893 Y89_5894 IPR001204 Phosphate transporter Y89_5895 IPR002727 Protein of unknown function DUF47 Y89_5895 IPR018445 Putitive phosphate transport regulator Y89_5895 IPR038078 Y89_5895 Y89_5896 IPR023577 CYTH-like domain Y89_5896 IPR033469 Y89_5896 Y89_5897 IPR001482 Type II secretion system protein E Y89_5897 IPR003593 AAA+ ATPase domain Y89_5897 IPR007831 General secretory system II, protein E, N-terminal Y89_5897 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5897 IPR037257 Y89_5897 Y89_5898 IPR002810 NfeD-like, C-terminal domain Y89_5899 IPR012661 Conserved hypothetical protein CHP02448 Y89_5900 IPR003437 Glycine cleavage system P protein, homodimeric Y89_5900 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_5900 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_5900 IPR015424 Pyridoxal phosphate-dependent transferase Y89_5900 IPR020581 Glycine cleavage system P protein Y89_5901 IPR002930 Glycine cleavage system H-protein Y89_5901 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Y89_5901 IPR011053 Single hybrid motif Y89_5901 IPR017453 Glycine cleavage system H-protein, subgroup Y89_5901 IPR033753 Y89_5901 Y89_5902 IPR006222 Glycine cleavage T-protein, N-terminal Y89_5902 IPR006223 Glycine cleavage system T protein Y89_5902 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain Y89_5902 IPR022903 Glycine cleavage system T protein, bacteria Y89_5902 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Y89_5902 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA Y89_5902 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain Y89_5903 IPR000515 MetI-like domain Y89_5903 IPR035906 Y89_5903 Y89_5904 IPR026045 Ferric binding protein Y89_5905 IPR000847 Transcription regulator HTH, LysR Y89_5905 IPR005119 LysR, substrate-binding Y89_5905 IPR036388 Y89_5905 Y89_5905 IPR036390 Y89_5905 Y89_5906 IPR011701 Major facilitator superfamily Y89_5906 IPR036259 Y89_5906 Y89_5908 IPR002938 Monooxygenase, FAD-binding Y89_5908 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 Y89_5908 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site Y89_5908 IPR036188 Y89_5908 Y89_5909 IPR027961 Protein of unknown function DUF4442 Y89_5909 IPR029069 HotDog domain Y89_5910 IPR002938 Monooxygenase, FAD-binding Y89_5910 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 Y89_5910 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase Y89_5910 IPR036188 Y89_5910 Y89_5911 IPR000994 Peptidase M24, structural domain Y89_5911 IPR007865 Aminopeptidase P, N-terminal Y89_5911 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Y89_5911 IPR036005 Y89_5911 Y89_5912 IPR011978 Uncharacterised protein family UPF0149 Y89_5912 IPR036255 Y89_5912 Y89_5913 IPR012662 Conserved hypothetical protein CHP02449 Y89_5914 IPR007838 Cell division protein ZapA-like Y89_5914 IPR036192 Y89_5914 Y89_5915 IPR002698 5-formyltetrahydrofolate cyclo-ligase Y89_5915 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain Y89_5915 IPR037171 Y89_5915 Y89_5917 IPR002740 EVE domain Y89_5917 IPR015947 PUA-like domain Y89_5919 IPR003439 ABC transporter-like Y89_5919 IPR003593 AAA+ ATPase domain Y89_5919 IPR017871 ABC transporter, conserved site Y89_5919 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5920 IPR039562 Y89_5920 Y89_5921 IPR005503 Flagellar basal body-associated protein FliL Y89_5922 IPR011032 GroES (chaperonin 10)-like Y89_5922 IPR013149 Alcohol dehydrogenase, C-terminal Y89_5922 IPR013154 Alcohol dehydrogenase GroES-like Y89_5922 IPR020843 Polyketide synthase, enoylreductase Y89_5922 IPR036291 Y89_5922 Y89_5923 IPR000849 Sugar phosphate transporter Y89_5923 IPR005267 Glycerol-3-phosphate transporter Y89_5923 IPR011701 Major facilitator superfamily Y89_5923 IPR021159 Glycerate/sugar phosphate transporter, conserved site Y89_5923 IPR036259 Y89_5923 Y89_5924 IPR001041 2Fe-2S ferredoxin-type domain Y89_5924 IPR001221 Phenol hydroxylase reductase Y89_5924 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_5924 IPR012675 Beta-grasp domain Y89_5924 IPR017938 Riboflavin synthase-like beta-barrel Y89_5924 IPR036010 Y89_5924 Y89_5924 IPR039261 Y89_5924 Y89_5925 IPR002830 UbiD decarboxylyase family Y89_5925 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Y89_5926 IPR002656 Acyltransferase 3 Y89_5927 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Y89_5927 IPR003593 AAA+ ATPase domain Y89_5927 IPR004665 Transcription termination factor Rho Y89_5927 IPR011112 Rho termination factor, N-terminal Y89_5927 IPR011113 Rho termination factor, RNA-binding Y89_5927 IPR011129 Cold shock protein Y89_5927 IPR012340 Nucleic acid-binding, OB-fold Y89_5927 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5927 IPR036269 Y89_5927 Y89_5928 IPR005746 Thioredoxin Y89_5928 IPR013766 Thioredoxin domain Y89_5928 IPR017937 Thioredoxin, conserved site Y89_5928 IPR036249 Y89_5928 Y89_5929 IPR003695 Ppx/GppA phosphatase Y89_5929 IPR022371 Exopolyphosphatase Y89_5929 IPR030673 Y89_5929 Y89_5930 IPR003414 Polyphosphate kinase Y89_5930 IPR024953 Polyphosphate kinase middle domain Y89_5930 IPR025198 Polyphosphate kinase N-terminal domain Y89_5930 IPR025200 Polyphosphate kinase C-terminal domain Y89_5930 IPR036830 Y89_5930 Y89_5930 IPR036832 Y89_5930 Y89_5931 IPR001731 Porphobilinogen synthase Y89_5931 IPR013785 Aldolase-type TIM barrel Y89_5931 IPR030656 Y89_5931 Y89_5932 IPR032816 Y89_5932 Y89_5933 IPR002818 ThiJ/PfpI Y89_5933 IPR026041 Enhancing lycopene biosynthesis protein 2 Y89_5933 IPR029062 Class I glutamine amidotransferase-like Y89_5934 IPR003736 Phenylacetic acid degradation-related domain Y89_5934 IPR006683 Thioesterase superfamily Y89_5934 IPR029069 HotDog domain Y89_5935 IPR003791 Protein of unknown function UPF0178 Y89_5936 IPR004923 Iron permease FTR1/Fip1/EfeU Y89_5936 IPR009056 Cytochrome c-like domain Y89_5936 IPR036909 Y89_5936 Y89_5937 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_5938 IPR005496 Integral membrane protein TerC Y89_5940 IPR003439 ABC transporter-like Y89_5940 IPR003593 AAA+ ATPase domain Y89_5940 IPR017871 ABC transporter, conserved site Y89_5940 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5940 IPR032781 Y89_5940 Y89_5941 IPR012659 Conserved hypothetical protein CHP02444 Y89_5943 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal Y89_5943 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain Y89_5943 IPR036944 Y89_5943 Y89_5944 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Y89_5944 IPR038309 Y89_5944 Y89_5945 IPR003752 Disulphide bond formation protein DsbB/BdbC Y89_5945 IPR022920 Disulphide bond formation protein DsbB Y89_5945 IPR023380 Disulphide bond formation protein DsbB-like domain Y89_5946 IPR005254 Heme biosynthesis-associated TPR protein Y89_5946 IPR010817 HemY, N-terminal Y89_5946 IPR011990 Tetratricopeptide-like helical domain Y89_5947 IPR007470 HemX Y89_5948 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase Y89_5948 IPR036108 Y89_5948 Y89_5949 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase Y89_5949 IPR022417 Porphobilinogen deaminase, N-terminal Y89_5949 IPR022418 Porphobilinogen deaminase, C-terminal Y89_5949 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site Y89_5949 IPR036803 Y89_5949 Y89_5950 IPR001789 Signal transduction response regulator, receiver domain Y89_5950 IPR007492 LytTR DNA-binding domain Y89_5950 IPR011006 CheY-like superfamily Y89_5951 IPR010559 Signal transduction histidine kinase, internal region Y89_5952 IPR000362 Fumarate lyase family Y89_5952 IPR008948 L-Aspartase-like Y89_5952 IPR009049 Argininosuccinate lyase Y89_5952 IPR020557 Fumarate lyase, conserved site Y89_5952 IPR022761 Fumarate lyase, N-terminal Y89_5952 IPR029419 Argininosuccinate lyase, C-terminal Y89_5955 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Y89_5955 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Y89_5955 IPR037026 Y89_5955 Y89_5956 IPR008514 Type VI secretion system effector, Hcp Y89_5956 IPR036624 Y89_5956 Y89_5957 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Y89_5960 IPR013468 Conserved hypothetical protein CHP02647 Y89_5960 IPR020948 Phosphate-starvation-induced PsiE-like Y89_5961 IPR000274 Adenylate cyclase, class-I Y89_5961 IPR024685 Adenylate cyclase class-I, N-terminal domain Y89_5962 IPR017008 Uncharacterised conserved protein UCP032817 Y89_5963 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Y89_5963 IPR023459 Transcription elongation factor GreA/GreB family Y89_5963 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain Y89_5963 IPR036953 Y89_5963 Y89_5964 IPR002908 Frataxin/CyaY Y89_5964 IPR020895 Frataxin conserved site Y89_5964 IPR036524 Y89_5964 Y89_5965 IPR017254 Lipoprotein, LppL Y89_5965 IPR032831 Y89_5965 Y89_5966 IPR000183 Ornithine/DAP/Arg decarboxylase Y89_5966 IPR002986 Diaminopimelate decarboxylase, LysA Y89_5966 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Y89_5966 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal Y89_5966 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Y89_5966 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Y89_5966 IPR029066 PLP-binding barrel Y89_5967 IPR001653 Diaminopimelate epimerase, DapF Y89_5967 IPR018510 Diaminopimelate epimerase, active site Y89_5968 IPR007435 Protein of unknown function DUF484 Y89_5968 IPR029016 GAF domain-like Y89_5969 IPR002104 Integrase, catalytic Y89_5969 IPR004107 Integrase, SAM-like, N-terminal Y89_5969 IPR010998 Integrase, Lambda-type, N-terminal Y89_5969 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_5969 IPR011931 Tyrosine recombinase XerC Y89_5969 IPR013762 Integrase-like, catalytic core Y89_5969 IPR023009 Tyrosine recombinase XerC/XerD Y89_5970 IPR006439 HAD hydrolase, subfamily IA Y89_5970 IPR023214 HAD-like domain Y89_5970 IPR036412 Y89_5970 Y89_5971 IPR005829 Sugar transporter, conserved site Y89_5971 IPR011701 Major facilitator superfamily Y89_5971 IPR036259 Y89_5971 Y89_5972 IPR000524 Transcription regulator HTH, GntR Y89_5972 IPR004839 Aminotransferase, class I/classII Y89_5972 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_5972 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_5972 IPR015424 Pyridoxal phosphate-dependent transferase Y89_5972 IPR036388 Y89_5972 Y89_5972 IPR036390 Y89_5972 Y89_5973 IPR000259 Fimbrial-type adhesion domain Y89_5973 IPR008966 Adhesion domain Y89_5973 IPR036937 Y89_5973 Y89_5975 IPR001602 Uncharacterised protein family UPF0047 Y89_5975 IPR035917 Y89_5975 Y89_5976 IPR001905 Ammonium transporter Y89_5976 IPR018047 Ammonium transporter, conserved site Y89_5976 IPR024041 Ammonium transporter AmtB-like domain Y89_5976 IPR029020 Ammonium/urea transporter Y89_5977 IPR002187 Nitrogen regulatory protein PII Y89_5977 IPR002332 Nitrogen regulatory protein P-II, urydylation site Y89_5977 IPR011322 Nitrogen regulatory PII-like, alpha/beta Y89_5977 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Y89_5977 IPR017918 Nitrogen regulatory protein PII, conserved site Y89_5978 IPR007475 Membrane fusogenic activity Y89_5979 IPR000523 Magnesium chelatase, ChlI subunit Y89_5979 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase Y89_5979 IPR003593 AAA+ ATPase domain Y89_5979 IPR004482 Mg chelatase-related protein Y89_5979 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_5979 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_5979 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5983 IPR026866 Uncharacterised chromosomal cassette SCCmec type IVc protein CR006 Y89_5983 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5984 IPR011032 GroES (chaperonin 10)-like Y89_5984 IPR013149 Alcohol dehydrogenase, C-terminal Y89_5984 IPR013154 Alcohol dehydrogenase GroES-like Y89_5984 IPR020843 Polyketide synthase, enoylreductase Y89_5984 IPR036291 Y89_5984 Y89_5985 IPR000847 Transcription regulator HTH, LysR Y89_5985 IPR005119 LysR, substrate-binding Y89_5985 IPR036388 Y89_5985 Y89_5985 IPR036390 Y89_5985 Y89_5987 IPR011008 Dimeric alpha-beta barrel Y89_5989 IPR021830 Protein of unknown function DUF3422 Y89_5990 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Y89_5990 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Y89_5991 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Y89_5991 IPR011032 GroES (chaperonin 10)-like Y89_5991 IPR013149 Alcohol dehydrogenase, C-terminal Y89_5991 IPR013154 Alcohol dehydrogenase GroES-like Y89_5991 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase Y89_5991 IPR020843 Polyketide synthase, enoylreductase Y89_5991 IPR036291 Y89_5991 Y89_5992 IPR002347 Glucose/ribitol dehydrogenase Y89_5992 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_5992 IPR036291 Y89_5992 Y89_5993 IPR000847 Transcription regulator HTH, LysR Y89_5993 IPR005119 LysR, substrate-binding Y89_5993 IPR036388 Y89_5993 Y89_5993 IPR036390 Y89_5993 Y89_5994 IPR003439 ABC transporter-like Y89_5994 IPR003593 AAA+ ATPase domain Y89_5994 IPR012693 ABC transporter, phosphonate import, PhnC Y89_5994 IPR017871 ABC transporter, conserved site Y89_5994 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_5995 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Y89_5996 IPR000515 MetI-like domain Y89_5996 IPR005769 ABC transporter, permease PhnE/PtxC Y89_5996 IPR035906 Y89_5996 Y89_5997 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y89_5997 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Y89_5997 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Y89_5997 IPR036291 Y89_5997 Y89_5998 IPR000847 Transcription regulator HTH, LysR Y89_5998 IPR005119 LysR, substrate-binding Y89_5998 IPR036388 Y89_5998 Y89_5998 IPR036390 Y89_5998 Y89_5999 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_5999 IPR013785 Aldolase-type TIM barrel Y89_6000 IPR011251 Luciferase-like domain Y89_6000 IPR020020 Luciferase-type oxidoreductase Y89_6000 IPR036661 Y89_6000 Y89_6001 IPR001845 HTH ArsR-type DNA-binding domain Y89_6001 IPR036388 Y89_6001 Y89_6001 IPR036390 Y89_6001 Y89_6002 IPR011093 Domain of unknown function DUF1528, C-terminal Y89_6002 IPR011119 Uncharacterised domain, helicase/relaxase, putative Y89_6002 IPR022391 Integrating conjugative element relaxase, PFGI-1 class Y89_6002 IPR036388 Y89_6002 Y89_6002 IPR036390 Y89_6002 Y89_6003 IPR017871 ABC transporter, conserved site Y89_6003 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6006 IPR001584 Integrase, catalytic core Y89_6006 IPR012337 Ribonuclease H-like domain Y89_6006 IPR036397 Y89_6006 Y89_6007 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site Y89_6007 IPR011032 GroES (chaperonin 10)-like Y89_6007 IPR013154 Alcohol dehydrogenase GroES-like Y89_6007 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 Y89_6007 IPR020843 Polyketide synthase, enoylreductase Y89_6007 IPR036291 Y89_6007 Y89_6008 IPR007138 Antibiotic biosynthesis monooxygenase-like domain Y89_6008 IPR011008 Dimeric alpha-beta barrel Y89_6009 IPR011032 GroES (chaperonin 10)-like Y89_6009 IPR013149 Alcohol dehydrogenase, C-terminal Y89_6009 IPR013154 Alcohol dehydrogenase GroES-like Y89_6009 IPR020843 Polyketide synthase, enoylreductase Y89_6009 IPR036291 Y89_6009 Y89_6010 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_6010 IPR013785 Aldolase-type TIM barrel Y89_6011 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_6011 IPR024456 Integrase catalytic domain, putative Y89_6013 IPR024534 Domain of unknown function DUF2220 Y89_6013 IPR024537 Domain of unknown function DUF3322 Y89_6014 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6015 IPR025449 Protein of unknown function DUF4194 Y89_6016 IPR021804 Protein of unknown function DUF3375 Y89_6020 IPR003615 HNH nuclease Y89_6022 IPR000594 UBA/THIF-type NAD/FAD binding fold Y89_6022 IPR035985 Y89_6022 Y89_6023 IPR012337 Ribonuclease H-like domain Y89_6023 IPR013520 Exonuclease, RNase T/DNA polymerase III Y89_6023 IPR036397 Y89_6023 Y89_6025 IPR002104 Integrase, catalytic Y89_6025 IPR010998 Integrase, Lambda-type, N-terminal Y89_6025 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_6025 IPR013762 Integrase-like, catalytic core Y89_6026 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_6026 IPR013762 Integrase-like, catalytic core Y89_6028 IPR000523 Magnesium chelatase, ChlI subunit Y89_6028 IPR025158 Mg chelatase-related protein, C-terminal domain Y89_6028 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6029 IPR000060 BCCT transporter family Y89_6029 IPR018093 BCCT transporter, conserved site Y89_6030 IPR023214 HAD-like domain Y89_6030 IPR036412 Y89_6030 Y89_6031 IPR000847 Transcription regulator HTH, LysR Y89_6031 IPR005119 LysR, substrate-binding Y89_6031 IPR036388 Y89_6031 Y89_6031 IPR036390 Y89_6031 Y89_6032 IPR002528 Multi antimicrobial extrusion protein Y89_6033 IPR000160 GGDEF domain Y89_6033 IPR001633 EAL domain Y89_6033 IPR029787 Nucleotide cyclase Y89_6033 IPR035919 Y89_6033 Y89_6034 IPR005752 DNA helicase, ATP-dependent, RepA type Y89_6034 IPR013986 DExx box DNA helicase domain Y89_6034 IPR014017 DNA helicase, UvrD-like, C-terminal Y89_6034 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6034 IPR034739 Y89_6034 Y89_6035 IPR000399 TPP-binding enzyme, conserved site Y89_6035 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Y89_6035 IPR012000 Thiamine pyrophosphate enzyme, central domain Y89_6035 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Y89_6035 IPR029035 DHS-like NAD/FAD-binding domain Y89_6035 IPR029061 Thiamin diphosphate-binding fold Y89_6036 IPR000836 Phosphoribosyltransferase domain Y89_6036 IPR010079 Xanthine phosphoribosyltransferase Y89_6036 IPR029057 Phosphoribosyltransferase-like Y89_6037 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Y89_6037 IPR037171 Y89_6037 Y89_6037 IPR038460 Y89_6037 Y89_6038 IPR002323 Cytochrome c, class IE Y89_6038 IPR009056 Cytochrome c-like domain Y89_6038 IPR036909 Y89_6038 Y89_6039 IPR001387 Cro/C1-type helix-turn-helix domain Y89_6039 IPR010982 Lambda repressor-like, DNA-binding domain Y89_6039 IPR011051 RmlC-like cupin domain Y89_6039 IPR013096 Cupin 2, conserved barrel Y89_6039 IPR014710 RmlC-like jelly roll fold Y89_6040 IPR000821 Alanine racemase Y89_6040 IPR001608 Alanine racemase, N-terminal Y89_6040 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Y89_6040 IPR011079 Alanine racemase, C-terminal Y89_6040 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site Y89_6040 IPR029066 PLP-binding barrel Y89_6041 IPR006175 YjgF/Yer057p/UK114 family Y89_6041 IPR035959 Y89_6041 Y89_6042 IPR006076 FAD dependent oxidoreductase Y89_6042 IPR023080 D-amino acid dehydrogenase small subunit, DadA Y89_6042 IPR036188 Y89_6042 Y89_6043 IPR008309 Uncharacterised conserved protein UCP025560 Y89_6044 IPR025985 YnbE-like lipoprotein Y89_6045 IPR021730 Dicarboxylate transport Y89_6046 IPR000485 AsnC-type HTH domain Y89_6046 IPR011008 Dimeric alpha-beta barrel Y89_6046 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Y89_6046 IPR019887 Transcription regulator AsnC-type, C-terminal Y89_6046 IPR019888 Transcription regulator AsnC-type Y89_6046 IPR036388 Y89_6046 Y89_6046 IPR036390 Y89_6046 Y89_6047 IPR006076 FAD dependent oxidoreductase Y89_6047 IPR036188 Y89_6047 Y89_6048 IPR001736 Phospholipase D/Transphosphatidylase Y89_6048 IPR025202 Phospholipase D-like domain Y89_6049 IPR011701 Major facilitator superfamily Y89_6049 IPR036259 Y89_6049 Y89_6050 IPR015590 Aldehyde dehydrogenase domain Y89_6050 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_6050 IPR016161 Aldehyde/histidinol dehydrogenase Y89_6050 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_6050 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_6050 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_6051 IPR005814 Aminotransferase class-III Y89_6051 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_6051 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_6051 IPR015424 Pyridoxal phosphate-dependent transferase Y89_6052 IPR008579 Domain of unknown function DUF861, cupin-3 Y89_6052 IPR011051 RmlC-like cupin domain Y89_6052 IPR014710 RmlC-like jelly roll fold Y89_6053 IPR001705 Ribosomal protein L33 Y89_6053 IPR011332 Zinc-binding ribosomal protein Y89_6053 IPR018264 Ribosomal protein L33, conserved site Y89_6053 IPR038584 Y89_6053 Y89_6054 IPR001383 Ribosomal protein L28 Y89_6054 IPR026569 Ribosomal protein L28/L24 Y89_6054 IPR034704 Y89_6054 Y89_6054 IPR037147 Y89_6054 Y89_6055 IPR000914 Bacterial extracellular solute-binding protein, family 5 Y89_6055 IPR030678 Y89_6055 Y89_6057 IPR001405 RadC protein Y89_6057 IPR010994 RuvA domain 2-like Y89_6057 IPR020891 Uncharacterised protein family UPF0758, conserved site Y89_6057 IPR025657 RadC-like JAB domain Y89_6058 IPR003382 Flavoprotein Y89_6058 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC Y89_6058 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal Y89_6058 IPR035929 Y89_6058 Y89_6058 IPR036551 Y89_6058 Y89_6059 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase Y89_6059 IPR029054 dUTPase-like Y89_6059 IPR036157 Y89_6059 Y89_6060 IPR005841 Alpha-D-phosphohexomutase superfamily Y89_6060 IPR005843 Alpha-D-phosphohexomutase, C-terminal Y89_6060 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Y89_6060 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Y89_6060 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Y89_6060 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Y89_6060 IPR016066 Alpha-D-phosphohexomutase, conserved site Y89_6060 IPR036900 Y89_6060 Y89_6061 IPR001048 Aspartate/glutamate/uridylate kinase Y89_6061 IPR001057 Glutamate/acetylglutamate kinase Y89_6061 IPR004662 Acetylglutamate kinase Y89_6061 IPR036393 Y89_6061 Y89_6061 IPR037528 Y89_6061 Y89_6062 IPR009057 Homeodomain-like Y89_6062 IPR018060 DNA binding HTH domain, AraC-type Y89_6062 IPR018062 HTH domain AraC-type, conserved site Y89_6062 IPR032687 Y89_6062 Y89_6063 IPR025737 MetA-pathway of phenol degradation, putative Y89_6064 IPR001608 Alanine racemase, N-terminal Y89_6064 IPR029066 PLP-binding barrel Y89_6065 IPR006094 FAD linked oxidase, N-terminal Y89_6065 IPR007173 D-arabinono-1,4-lactone oxidase Y89_6065 IPR010031 Sugar 1,4-lactone oxidase Y89_6065 IPR016167 FAD-binding, type 2, subdomain 1 Y89_6065 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_6065 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Y89_6065 IPR036318 Y89_6065 Y89_6066 IPR002323 Cytochrome c, class IE Y89_6066 IPR009056 Cytochrome c-like domain Y89_6066 IPR036909 Y89_6066 Y89_6067 IPR006683 Thioesterase superfamily Y89_6067 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family Y89_6067 IPR029069 HotDog domain Y89_6069 IPR000836 Phosphoribosyltransferase domain Y89_6069 IPR004467 Orotate phosphoribosyl transferase domain Y89_6069 IPR023031 Orotate phosphoribosyltransferase Y89_6069 IPR029057 Phosphoribosyltransferase-like Y89_6070 IPR004808 AP endonuclease 1 Y89_6070 IPR005135 Endonuclease/exonuclease/phosphatase Y89_6070 IPR036691 Y89_6070 Y89_6071 IPR019109 Protein of unknown function DUF4870 Y89_6072 IPR001247 Exoribonuclease, phosphorolytic domain 1 Y89_6072 IPR002381 Ribonuclease phosphorolytic, bacterial-type Y89_6072 IPR015847 Exoribonuclease, phosphorolytic domain 2 Y89_6072 IPR018336 Ribonuclease PH, conserved site Y89_6072 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_6072 IPR027408 PNPase/RNase PH domain Y89_6072 IPR036345 Y89_6072 Y89_6073 IPR005229 Conserved hypothetical protein CHP00255 Y89_6073 IPR013527 YicC-like, N-terminal Y89_6073 IPR013551 Domain of unknown function DUF1732 Y89_6074 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Y89_6074 IPR017665 Guanylate kinase Y89_6074 IPR020590 Guanylate kinase, conserved site Y89_6074 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6075 IPR003716 DNA-directed RNA polymerase, omega subunit Y89_6075 IPR006110 RNA polymerase, subunit omega/K/RPB6 Y89_6075 IPR012293 RNA polymerase subunit, RPB6/omega Y89_6075 IPR036161 Y89_6075 Y89_6076 IPR002912 ACT domain Y89_6076 IPR003607 HD/PDEase domain Y89_6076 IPR004095 TGS Y89_6076 IPR004811 RelA/SpoT family Y89_6076 IPR007685 RelA/SpoT Y89_6076 IPR012675 Beta-grasp domain Y89_6076 IPR012676 TGS-like Y89_6077 IPR006056 Enamine/imine deaminase YjgF-like Y89_6077 IPR006175 YjgF/Yer057p/UK114 family Y89_6077 IPR019897 YjgF-like protein, conserved site Y89_6077 IPR035959 Y89_6077 Y89_6079 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Y89_6080 IPR003313 AraC-type arabinose-binding/dimerisation domain Y89_6080 IPR009057 Homeodomain-like Y89_6080 IPR014710 RmlC-like jelly roll fold Y89_6080 IPR018060 DNA binding HTH domain, AraC-type Y89_6080 IPR018062 HTH domain AraC-type, conserved site Y89_6080 IPR020449 Transcription regulator HTH, AraC- type Y89_6080 IPR037923 Y89_6080 Y89_6081 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Y89_6081 IPR036291 Y89_6081 Y89_6082 IPR000847 Transcription regulator HTH, LysR Y89_6082 IPR005119 LysR, substrate-binding Y89_6082 IPR036388 Y89_6082 Y89_6082 IPR036390 Y89_6082 Y89_6083 IPR001650 Helicase, C-terminal Y89_6083 IPR004609 ATP-dependent DNA helicase RecG Y89_6083 IPR011545 DEAD/DEAH box helicase domain Y89_6083 IPR012340 Nucleic acid-binding, OB-fold Y89_6083 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_6083 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6083 IPR033454 Y89_6083 Y89_6084 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Y89_6084 IPR013976 Metal-dependent hydrolase HDOD Y89_6084 IPR014627 Uncharacterised conserved protein UCP036888, signal transduction HD-GYP-like, PA5346 type Y89_6084 IPR036754 Y89_6084 Y89_6085 IPR036527 Y89_6085 Y89_6086 IPR000119 Histone-like bacterial DNA-binding protein Y89_6086 IPR010992 Integration host factor (IHF)-like DNA-binding domain Y89_6086 IPR020816 Histone-like DNA-binding protein, conserved site Y89_6087 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_6087 IPR036188 Y89_6087 Y89_6088 IPR018527 Rubredoxin, iron-binding site Y89_6088 IPR024922 Rubredoxin Y89_6088 IPR024935 Rubredoxin domain Y89_6089 IPR018527 Rubredoxin, iron-binding site Y89_6089 IPR024922 Rubredoxin Y89_6089 IPR024935 Rubredoxin domain Y89_6090 IPR005624 Domain of unknown function DUF336 Y89_6090 IPR038084 Y89_6090 Y89_6091 IPR004017 Cysteine-rich domain Y89_6091 IPR009051 Alpha-helical ferredoxin Y89_6091 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_6091 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_6092 IPR006094 FAD linked oxidase, N-terminal Y89_6092 IPR016164 FAD-linked oxidase-like, C-terminal Y89_6092 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_6092 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Y89_6092 IPR036318 Y89_6092 Y89_6093 IPR004113 FAD-linked oxidase, C-terminal Y89_6093 IPR004490 Glycolate oxidase subunit GlcD Y89_6093 IPR006094 FAD linked oxidase, N-terminal Y89_6093 IPR016164 FAD-linked oxidase-like, C-terminal Y89_6093 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Y89_6093 IPR036318 Y89_6093 Y89_6094 IPR000524 Transcription regulator HTH, GntR Y89_6094 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_6094 IPR011711 GntR, C-terminal Y89_6094 IPR036388 Y89_6094 Y89_6094 IPR036390 Y89_6094 Y89_6095 IPR007440 Chorismate--pyruvate lyase Y89_6095 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Y89_6096 IPR000537 UbiA prenyltransferase family Y89_6096 IPR006370 4-hydroxybenzoate polyprenyl transferase Y89_6096 IPR030470 Y89_6096 Y89_6097 IPR005297 Lipoprotein repeat Y89_6097 IPR014558 Uncharacterised conserved lipoprotein Y89_6098 IPR001789 Signal transduction response regulator, receiver domain Y89_6098 IPR001867 Signal transduction response regulator, C-terminal Y89_6098 IPR011006 CheY-like superfamily Y89_6098 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB Y89_6098 IPR016032 Signal transduction response regulator, C-terminal effector Y89_6098 IPR036388 Y89_6098 Y89_6099 IPR000014 PAS domain Y89_6099 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_6099 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_6099 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_6099 IPR013767 PAS fold Y89_6099 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR Y89_6099 IPR021766 Protein of unknown function DUF3329 Y89_6099 IPR035965 Y89_6099 Y89_6099 IPR036097 Y89_6099 Y89_6099 IPR036890 Y89_6099 Y89_6100 IPR000644 CBS domain Y89_6100 IPR002550 Domain of unknown function DUF21 Y89_6100 IPR005170 Transporter-associated domain Y89_6100 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Y89_6100 IPR036318 Y89_6100 Y89_6101 IPR011055 Duplicated hybrid motif Y89_6101 IPR016047 Peptidase M23 Y89_6101 IPR025392 Domain of unknown function DUF4124 Y89_6102 IPR001789 Signal transduction response regulator, receiver domain Y89_6102 IPR011006 CheY-like superfamily Y89_6103 IPR026022 PhoU domain Y89_6103 IPR028366 Phosphate transport system protein PhoU Y89_6103 IPR038078 Y89_6103 Y89_6104 IPR003439 ABC transporter-like Y89_6104 IPR003593 AAA+ ATPase domain Y89_6104 IPR005670 Phosphate transport system permease protein 1 Y89_6104 IPR017871 ABC transporter, conserved site Y89_6104 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6105 IPR000515 MetI-like domain Y89_6105 IPR005672 Phosphate transport system permease protein PstA Y89_6105 IPR035906 Y89_6105 Y89_6106 IPR000515 MetI-like domain Y89_6106 IPR035906 Y89_6106 Y89_6106 IPR036322 Y89_6106 Y89_6107 IPR011862 Phosphate binding protein Y89_6107 IPR024370 PBP domain Y89_6108 IPR005828 General substrate transporter Y89_6108 IPR036259 Y89_6108 Y89_6109 IPR006683 Thioesterase superfamily Y89_6109 IPR029069 HotDog domain Y89_6110 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Y89_6110 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Y89_6110 IPR011533 Oxygen-dependent choline dehydrogenase Y89_6110 IPR012132 Glucose-methanol-choline oxidoreductase Y89_6110 IPR027424 Glucose Oxidase, domain 2 Y89_6110 IPR036188 Y89_6110 Y89_6111 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase Y89_6111 IPR015590 Aldehyde dehydrogenase domain Y89_6111 IPR016160 Aldehyde dehydrogenase, cysteine active site Y89_6111 IPR016161 Aldehyde/histidinol dehydrogenase Y89_6111 IPR016162 Aldehyde dehydrogenase, N-terminal Y89_6111 IPR016163 Aldehyde dehydrogenase, C-terminal Y89_6111 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Y89_6112 IPR001647 DNA-binding HTH domain, TetR-type Y89_6112 IPR009057 Homeodomain-like Y89_6112 IPR017757 Transcriptional repressor BetI Y89_6112 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Y89_6112 IPR036271 Y89_6112 Y89_6112 IPR039538 Y89_6112 Y89_6113 IPR000060 BCCT transporter family Y89_6114 IPR003439 ABC transporter-like Y89_6114 IPR003593 AAA+ ATPase domain Y89_6114 IPR017871 ABC transporter, conserved site Y89_6114 IPR022473 ABC transporter, Choline, ATP-binding subunit Y89_6114 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6115 IPR000515 MetI-like domain Y89_6115 IPR017784 ABC transporter, choline, permease protein Y89_6115 IPR035906 Y89_6115 Y89_6116 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain Y89_6116 IPR017783 ABC transporter, choline, substrate-binding protein Y89_6117 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form Y89_6117 IPR005130 Serine dehydratase-like, alpha subunit Y89_6117 IPR005131 Serine dehydratase beta chain Y89_6117 IPR029009 Allosteric substrate binding domain Y89_6118 IPR002818 ThiJ/PfpI Y89_6118 IPR009057 Homeodomain-like Y89_6118 IPR018060 DNA binding HTH domain, AraC-type Y89_6118 IPR018062 HTH domain AraC-type, conserved site Y89_6118 IPR029062 Class I glutamine amidotransferase-like Y89_6120 IPR000847 Transcription regulator HTH, LysR Y89_6120 IPR005119 LysR, substrate-binding Y89_6120 IPR036388 Y89_6120 Y89_6120 IPR036390 Y89_6120 Y89_6121 IPR004630 Uncharacterised protein family UPF0324, bacteria Y89_6121 IPR018383 Uncharacterised protein family UPF0324, prokaryote Y89_6122 IPR013094 Alpha/beta hydrolase fold-3 Y89_6122 IPR029058 Alpha/Beta hydrolase fold Y89_6122 IPR033140 Y89_6122 Y89_6123 IPR029069 HotDog domain Y89_6124 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Y89_6124 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Y89_6124 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Y89_6124 IPR013328 Dehydrogenase, multihelical Y89_6124 IPR022694 3-hydroxyacyl-CoA dehydrogenase Y89_6124 IPR026578 L-carnitine dehydrogenase Y89_6124 IPR036291 Y89_6124 Y89_6125 IPR008567 3-keto-5-aminohexanoate cleavage enzyme Y89_6125 IPR013785 Aldolase-type TIM barrel Y89_6126 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain Y89_6126 IPR017783 ABC transporter, choline, substrate-binding protein Y89_6127 IPR002818 ThiJ/PfpI Y89_6127 IPR009057 Homeodomain-like Y89_6127 IPR018060 DNA binding HTH domain, AraC-type Y89_6127 IPR018062 HTH domain AraC-type, conserved site Y89_6127 IPR029062 Class I glutamine amidotransferase-like Y89_6128 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site Y89_6128 IPR002933 Peptidase M20 Y89_6128 IPR010169 Acetylornithine deacetylase (ArgE) Y89_6128 IPR011650 Peptidase M20, dimerisation domain Y89_6128 IPR036264 Y89_6128 Y89_6129 IPR010430 Protein of unknown function DUF1028 Y89_6129 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_6130 IPR006175 YjgF/Yer057p/UK114 family Y89_6130 IPR035959 Y89_6130 Y89_6131 IPR036188 Y89_6131 Y89_6132 IPR001736 Phospholipase D/Transphosphatidylase Y89_6132 IPR022924 Cardiolipin synthase Y89_6132 IPR025202 Phospholipase D-like domain Y89_6132 IPR027379 Cardiolipin synthase N-terminal Y89_6132 IPR030840 Y89_6132 Y89_6133 IPR009783 Protein of unknown function DUF1348 Y89_6133 IPR032710 Y89_6133 Y89_6134 IPR008257 Renal dipeptidase family Y89_6134 IPR032466 Y89_6134 Y89_6135 IPR004096 4-vinyl reductase, 4VR Y89_6135 IPR024096 NO signalling/Golgi transport ligand-binding domain Y89_6136 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Y89_6136 IPR013785 Aldolase-type TIM barrel Y89_6136 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_6136 IPR036188 Y89_6136 Y89_6137 IPR004017 Cysteine-rich domain Y89_6137 IPR009051 Alpha-helical ferredoxin Y89_6137 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Y89_6137 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Y89_6137 IPR021872 Protein of unknown function DUF3483 Y89_6138 IPR001308 Electron transfer flavoprotein, alpha subunit Y89_6138 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_6138 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Y89_6138 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Y89_6138 IPR029035 DHS-like NAD/FAD-binding domain Y89_6139 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Y89_6139 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Y89_6141 IPR001387 Cro/C1-type helix-turn-helix domain Y89_6141 IPR010982 Lambda repressor-like, DNA-binding domain Y89_6145 IPR007838 Cell division protein ZapA-like Y89_6145 IPR036192 Y89_6145 Y89_6147 IPR005325 Protein of unknown function DUF308, membrane Y89_6149 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit Y89_6149 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain Y89_6149 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Y89_6149 IPR036922 Y89_6149 Y89_6150 IPR001041 2Fe-2S ferredoxin-type domain Y89_6150 IPR001433 Oxidoreductase FAD/NAD(P)-binding Y89_6150 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Y89_6150 IPR001834 NADH:cytochrome b5 reductase (CBR) Y89_6150 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Y89_6150 IPR008333 Oxidoreductase, FAD-binding domain Y89_6150 IPR012675 Beta-grasp domain Y89_6150 IPR017938 Riboflavin synthase-like beta-barrel Y89_6150 IPR036010 Y89_6150 Y89_6150 IPR039261 Y89_6150 Y89_6152 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase Y89_6152 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_6152 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_6152 IPR015424 Pyridoxal phosphate-dependent transferase Y89_6152 IPR026273 Low specificity L-threonine aldolase Y89_6154 IPR001085 Serine hydroxymethyltransferase Y89_6154 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_6154 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_6154 IPR015424 Pyridoxal phosphate-dependent transferase Y89_6154 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site Y89_6154 IPR039429 Y89_6154 Y89_6155 IPR006076 FAD dependent oxidoreductase Y89_6155 IPR006278 Sarcosine oxidase, beta subunit, heterotetrameric Y89_6155 IPR036188 Y89_6155 Y89_6156 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric Y89_6156 IPR038561 Y89_6156 Y89_6157 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II Y89_6157 IPR006222 Glycine cleavage T-protein, N-terminal Y89_6157 IPR006277 Sarcosine oxidase, alpha subunit Y89_6157 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain Y89_6157 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Y89_6157 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Y89_6157 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain Y89_6157 IPR036188 Y89_6157 Y89_6158 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric Y89_6158 IPR007375 Sarcosine oxidase, gamma subunit Y89_6158 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Y89_6159 IPR002376 Formyl transferase, N-terminal Y89_6159 IPR004810 Formyltetrahydrofolate deformylase Y89_6159 IPR036477 Y89_6159 Y89_6160 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Y89_6160 IPR011032 GroES (chaperonin 10)-like Y89_6160 IPR013149 Alcohol dehydrogenase, C-terminal Y89_6160 IPR013154 Alcohol dehydrogenase GroES-like Y89_6160 IPR014184 Formaldehyde dehydrogenase, glutathione-independent Y89_6160 IPR036291 Y89_6160 Y89_6161 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase Y89_6161 IPR011013 Galactose mutarotase-like domain Y89_6161 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup Y89_6161 IPR025532 Glucose-6-phosphate 1-epimerase Y89_6162 IPR021727 Protein of unknown function DUF3299 Y89_6163 IPR007341 Transglycosylase-associated protein Y89_6164 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Y89_6164 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit Y89_6164 IPR011054 Rudiment single hybrid motif Y89_6164 IPR013815 ATP-grasp fold, subdomain 1 Y89_6164 IPR016185 Pre-ATP-grasp domain Y89_6165 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain Y89_6165 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE Y89_6165 IPR033747 Y89_6165 Y89_6165 IPR035893 Y89_6165 Y89_6166 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Y89_6166 IPR011032 GroES (chaperonin 10)-like Y89_6166 IPR013149 Alcohol dehydrogenase, C-terminal Y89_6166 IPR013154 Alcohol dehydrogenase GroES-like Y89_6166 IPR020843 Polyketide synthase, enoylreductase Y89_6166 IPR036291 Y89_6166 Y89_6167 IPR000847 Transcription regulator HTH, LysR Y89_6167 IPR005119 LysR, substrate-binding Y89_6167 IPR036388 Y89_6167 Y89_6167 IPR036390 Y89_6167 Y89_6168 IPR000362 Fumarate lyase family Y89_6168 IPR004708 Aspartate ammonia-lyase Y89_6168 IPR008948 L-Aspartase-like Y89_6168 IPR018951 Fumarase C, C-terminal Y89_6168 IPR020557 Fumarate lyase, conserved site Y89_6168 IPR022761 Fumarate lyase, N-terminal Y89_6168 IPR024083 Fumarase/histidase, N-terminal Y89_6169 IPR007272 Sulphur transport domain Y89_6170 IPR000524 Transcription regulator HTH, GntR Y89_6170 IPR004839 Aminotransferase, class I/classII Y89_6170 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_6170 IPR015424 Pyridoxal phosphate-dependent transferase Y89_6170 IPR036388 Y89_6170 Y89_6170 IPR036390 Y89_6170 Y89_6171 IPR000182 GNAT domain Y89_6171 IPR016181 Acyl-CoA N-acyltransferase Y89_6172 IPR000182 GNAT domain Y89_6172 IPR016181 Acyl-CoA N-acyltransferase Y89_6173 IPR002293 Amino acid/polyamine transporter I Y89_6173 IPR013059 Tryptophan/tyrosine transporter Y89_6173 IPR018227 Tryptophan/tyrosine permease Y89_6174 IPR000089 Biotin/lipoyl attachment Y89_6174 IPR000891 Pyruvate carboxyltransferase Y89_6174 IPR003379 Carboxylase, conserved domain Y89_6174 IPR005776 Oxaloacetate decarboxylase, alpha subunit Y89_6174 IPR011053 Single hybrid motif Y89_6174 IPR013785 Aldolase-type TIM barrel Y89_6175 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase Y89_6175 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Y89_6175 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal Y89_6175 IPR005482 Biotin carboxylase, C-terminal Y89_6175 IPR011054 Rudiment single hybrid motif Y89_6175 IPR016185 Pre-ATP-grasp domain Y89_6176 IPR000847 Transcription regulator HTH, LysR Y89_6176 IPR005119 LysR, substrate-binding Y89_6176 IPR036388 Y89_6176 Y89_6176 IPR036390 Y89_6176 Y89_6178 IPR000281 Helix-turn-helix protein RpiR Y89_6178 IPR001347 Sugar isomerase (SIS) Y89_6178 IPR009057 Homeodomain-like Y89_6178 IPR036388 Y89_6178 Y89_6179 IPR001282 Glucose-6-phosphate dehydrogenase Y89_6179 IPR019796 Glucose-6-phosphate dehydrogenase, active site Y89_6179 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding Y89_6179 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal Y89_6179 IPR036291 Y89_6179 Y89_6180 IPR001539 Peptidase U32 Y89_6180 IPR032525 Y89_6180 Y89_6181 IPR017853 Glycoside hydrolase, superfamily Y89_6181 IPR021488 Protein of unknown function DUF3142 Y89_6183 IPR000014 PAS domain Y89_6183 IPR000160 GGDEF domain Y89_6183 IPR001610 PAC motif Y89_6183 IPR001633 EAL domain Y89_6183 IPR013655 PAS fold-3 Y89_6183 IPR029787 Nucleotide cyclase Y89_6183 IPR035919 Y89_6183 Y89_6183 IPR035965 Y89_6183 Y89_6184 IPR005753 DNA helicase, ATP-dependent, UvrD type Y89_6184 IPR013986 DExx box DNA helicase domain Y89_6184 IPR014017 DNA helicase, UvrD-like, C-terminal Y89_6184 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6184 IPR034739 Y89_6184 Y89_6185 IPR000620 Drug/metabolite transporter Y89_6186 IPR003702 Acetyl-CoA hydrolase/transferase Y89_6186 IPR017821 Succinate CoA transferase Y89_6186 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Y89_6186 IPR037171 Y89_6186 Y89_6186 IPR038460 Y89_6186 Y89_6187 IPR009506 Protein of unknown function DUF1127 Y89_6188 IPR001296 Glycosyl transferase, family 1 Y89_6188 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Y89_6189 IPR001296 Glycosyl transferase, family 1 Y89_6189 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Y89_6190 IPR001296 Glycosyl transferase, family 1 Y89_6191 IPR003439 ABC transporter-like Y89_6191 IPR003593 AAA+ ATPase domain Y89_6191 IPR017871 ABC transporter, conserved site Y89_6191 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6191 IPR029439 Wzt, C-terminal Y89_6192 IPR000412 ABC-2 transporter Y89_6192 IPR013525 ABC-2 type transporter Y89_6193 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal Y89_6193 IPR005835 Nucleotidyl transferase Y89_6193 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Y89_6193 IPR011051 RmlC-like cupin domain Y89_6193 IPR014710 RmlC-like jelly roll fold Y89_6193 IPR029044 Nucleotide-diphospho-sugar transferases Y89_6194 IPR006368 GDP-mannose 4,6-dehydratase Y89_6194 IPR016040 NAD(P)-binding domain Y89_6194 IPR036291 Y89_6194 Y89_6195 IPR016040 NAD(P)-binding domain Y89_6195 IPR036291 Y89_6195 Y89_6198 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_6199 IPR002656 Acyltransferase 3 Y89_6200 IPR013216 Methyltransferase type 11 Y89_6200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_6201 IPR009506 Protein of unknown function DUF1127 Y89_6202 IPR012661 Conserved hypothetical protein CHP02448 Y89_6203 IPR012661 Conserved hypothetical protein CHP02448 Y89_6204 IPR012661 Conserved hypothetical protein CHP02448 Y89_6205 IPR025178 Domain of unknown function DUF4105 Y89_6206 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V Y89_6206 IPR011057 Mss4-like Y89_6207 IPR004776 Auxin efflux carrier Y89_6207 IPR038770 Y89_6207 Y89_6208 IPR012661 Conserved hypothetical protein CHP02448 Y89_6209 IPR004680 Citrate transporter-like domain Y89_6209 IPR014738 Citrate transporter Y89_6210 IPR005496 Integral membrane protein TerC Y89_6211 IPR000352 Peptide chain release factor class I/class II Y89_6211 IPR017509 Putative peptide chain release factor H Y89_6212 IPR001233 tRNA-splicing ligase, RtcB Y89_6212 IPR017510 Release factor H-coupled RctB family protein Y89_6212 IPR036025 Y89_6212 Y89_6214 IPR003841 Sodium-dependent phosphate transport protein Y89_6214 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein Y89_6214 IPR026022 PhoU domain Y89_6214 IPR038078 Y89_6214 Y89_6215 IPR007863 Peptidase M16, C-terminal domain Y89_6215 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Y89_6215 IPR011765 Peptidase M16, N-terminal Y89_6216 IPR016181 Acyl-CoA N-acyltransferase Y89_6217 IPR005829 Sugar transporter, conserved site Y89_6217 IPR011701 Major facilitator superfamily Y89_6217 IPR036259 Y89_6217 Y89_6218 IPR016937 Uncharacterised conserved protein UCP029727 Y89_6218 IPR022606 Protein of unknown function DUF2914 Y89_6219 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB Y89_6219 IPR011642 Nucleoside recognition Gate Y89_6220 IPR001991 Sodium:dicarboxylate symporter Y89_6220 IPR018107 Sodium:dicarboxylate symporter, conserved site Y89_6220 IPR034703 Y89_6220 Y89_6220 IPR036458 Y89_6220 Y89_6221 IPR014453 Inhibitor of vertebrate lysozyme Y89_6221 IPR036501 Y89_6221 Y89_6222 IPR009760 Protein of unknown function DUF1328 Y89_6223 IPR001789 Signal transduction response regulator, receiver domain Y89_6223 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_6223 IPR002197 DNA binding HTH domain, Fis-type Y89_6223 IPR003593 AAA+ ATPase domain Y89_6223 IPR009057 Homeodomain-like Y89_6223 IPR011006 CheY-like superfamily Y89_6223 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_6223 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_6223 IPR025944 Sigma-54 interaction domain, conserved site Y89_6223 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6224 IPR000014 PAS domain Y89_6224 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_6224 IPR003660 HAMP linker domain Y89_6224 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_6224 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_6224 IPR013656 PAS fold-4 Y89_6224 IPR031909 Y89_6224 Y89_6224 IPR035965 Y89_6224 Y89_6224 IPR036097 Y89_6224 Y89_6224 IPR036890 Y89_6224 Y89_6224 IPR038320 Y89_6224 Y89_6225 IPR002477 Peptidoglycan binding-like Y89_6225 IPR002502 N-acetylmuramoyl-L-alanine amidase domain Y89_6225 IPR036365 Y89_6225 Y89_6225 IPR036366 Y89_6225 Y89_6225 IPR036505 Y89_6225 Y89_6226 IPR002771 Multiple antibiotic resistance (MarC)-related Y89_6227 IPR000160 GGDEF domain Y89_6227 IPR029787 Nucleotide cyclase Y89_6228 IPR005135 Endonuclease/exonuclease/phosphatase Y89_6228 IPR036691 Y89_6228 Y89_6229 IPR001853 DSBA-like thioredoxin domain Y89_6229 IPR017937 Thioredoxin, conserved site Y89_6229 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Y89_6229 IPR036249 Y89_6229 Y89_6230 IPR009056 Cytochrome c-like domain Y89_6230 IPR024167 Cytochrome c4 Y89_6230 IPR036909 Y89_6230 Y89_6231 IPR002323 Cytochrome c, class IE Y89_6231 IPR009056 Cytochrome c-like domain Y89_6231 IPR036909 Y89_6231 Y89_6232 IPR006073 GTP binding domain Y89_6232 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC Y89_6232 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6233 IPR001098 DNA-directed DNA polymerase, family A, palm domain Y89_6233 IPR002298 DNA polymerase A Y89_6233 IPR002421 5'-3' exonuclease, N-terminal Y89_6233 IPR002562 3'-5' exonuclease domain Y89_6233 IPR008918 Helix-hairpin-helix motif, class 2 Y89_6233 IPR012337 Ribonuclease H-like domain Y89_6233 IPR018320 DNA polymerase 1 Y89_6233 IPR019760 DNA-directed DNA polymerase, family A, conserved site Y89_6233 IPR020045 5'-3' exonuclease, C-terminal domain Y89_6233 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal Y89_6233 IPR029060 PIN domain-like Y89_6233 IPR036279 Y89_6233 Y89_6233 IPR036397 Y89_6233 Y89_6234 IPR021357 Protein of unknown function DUF2782 Y89_6235 IPR002575 Aminoglycoside phosphotransferase Y89_6235 IPR005280 Homoserine kinase ThrB Y89_6235 IPR011009 Protein kinase-like domain Y89_6237 IPR000788 Ribonucleotide reductase large subunit, C-terminal Y89_6237 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent Y89_6238 IPR006127 Periplasmic solute binding protein family Y89_6239 IPR002481 Ferric-uptake regulator Y89_6239 IPR036388 Y89_6239 Y89_6239 IPR036390 Y89_6239 Y89_6240 IPR003439 ABC transporter-like Y89_6240 IPR003593 AAA+ ATPase domain Y89_6240 IPR017871 ABC transporter, conserved site Y89_6240 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6241 IPR001626 ABC-3 Y89_6241 IPR037294 Y89_6241 Y89_6243 IPR003439 ABC transporter-like Y89_6243 IPR003593 AAA+ ATPase domain Y89_6243 IPR017871 ABC transporter, conserved site Y89_6243 IPR018449 NIL domain Y89_6243 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6244 IPR000515 MetI-like domain Y89_6244 IPR035906 Y89_6244 Y89_6245 IPR004872 Lipoprotein NlpA family Y89_6246 IPR000281 Helix-turn-helix protein RpiR Y89_6246 IPR001347 Sugar isomerase (SIS) Y89_6246 IPR009057 Homeodomain-like Y89_6246 IPR036388 Y89_6246 Y89_6247 IPR000868 Isochorismatase-like Y89_6247 IPR036380 Y89_6247 Y89_6248 IPR008146 Glutamine synthetase, catalytic domain Y89_6248 IPR008147 Glutamine synthetase, beta-Grasp Y89_6248 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_6248 IPR036651 Y89_6248 Y89_6249 IPR007709 N-formylglutamate amidohydrolase Y89_6249 IPR011227 Uncharacterised conserved protein UCP029730 Y89_6250 IPR002293 Amino acid/polyamine transporter I Y89_6250 IPR004841 Amino acid permease/ SLC12A domain Y89_6251 IPR001789 Signal transduction response regulator, receiver domain Y89_6251 IPR002078 RNA polymerase sigma factor 54 interaction domain Y89_6251 IPR002197 DNA binding HTH domain, Fis-type Y89_6251 IPR003593 AAA+ ATPase domain Y89_6251 IPR009057 Homeodomain-like Y89_6251 IPR011006 CheY-like superfamily Y89_6251 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Y89_6251 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Y89_6251 IPR025944 Sigma-54 interaction domain, conserved site Y89_6251 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6252 IPR003594 Histidine kinase-like ATPase, C-terminal domain Y89_6252 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Y89_6252 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Y89_6252 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) Y89_6252 IPR029151 Periplasmic sensor domain-like Y89_6252 IPR036097 Y89_6252 Y89_6252 IPR036890 Y89_6252 Y89_6253 IPR000073 Alpha/beta hydrolase fold-1 Y89_6253 IPR029058 Alpha/Beta hydrolase fold Y89_6254 IPR001460 Penicillin-binding protein, transpeptidase Y89_6254 IPR012338 Beta-lactamase/transpeptidase-like Y89_6255 IPR021732 Protein of unknown function DUF3301 Y89_6256 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase Y89_6256 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Y89_6256 IPR023685 Pyridoxal kinase PdxY Y89_6256 IPR029056 Ribokinase-like Y89_6257 IPR032816 Y89_6257 Y89_6258 IPR003148 Regulator of K+ conductance, N-terminal Y89_6258 IPR004771 K+/H+ exchanger Y89_6258 IPR006153 Cation/H+ exchanger Y89_6258 IPR036291 Y89_6258 Y89_6258 IPR038770 Y89_6258 Y89_6259 IPR006683 Thioesterase superfamily Y89_6259 IPR029069 HotDog domain Y89_6260 IPR011990 Tetratricopeptide-like helical domain Y89_6261 IPR002347 Glucose/ribitol dehydrogenase Y89_6261 IPR020904 Short-chain dehydrogenase/reductase, conserved site Y89_6261 IPR036291 Y89_6261 Y89_6262 IPR008146 Glutamine synthetase, catalytic domain Y89_6262 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Y89_6262 IPR036651 Y89_6262 Y89_6263 IPR005814 Aminotransferase class-III Y89_6263 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Y89_6263 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Y89_6263 IPR015424 Pyridoxal phosphate-dependent transferase Y89_6264 IPR002347 Glucose/ribitol dehydrogenase Y89_6264 IPR036291 Y89_6264 Y89_6265 IPR000524 Transcription regulator HTH, GntR Y89_6265 IPR008920 Transcription regulator FadR/GntR, C-terminal Y89_6265 IPR011711 GntR, C-terminal Y89_6265 IPR036388 Y89_6265 Y89_6265 IPR036390 Y89_6265 Y89_6266 IPR010305 Protein of unknown function DUF903 Y89_6266 IPR010920 Like-Sm (LSM) domain Y89_6267 IPR018958 SMI1/KNR4 like domain Y89_6267 IPR037883 Y89_6267 Y89_6268 IPR007379 Tim44-like domain Y89_6268 IPR032710 Y89_6268 Y89_6269 IPR006153 Cation/H+ exchanger Y89_6269 IPR038770 Y89_6269 Y89_6270 IPR004736 Citrate-proton symport Y89_6270 IPR005829 Sugar transporter, conserved site Y89_6270 IPR011701 Major facilitator superfamily Y89_6270 IPR036259 Y89_6270 Y89_6271 IPR003538 Gram-negative bacterial TonB protein Y89_6271 IPR006260 TonB, C-terminal Y89_6271 IPR037682 Y89_6271 Y89_6272 IPR003495 CobW/HypB/UreG domain Y89_6272 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Y89_6272 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6274 IPR014955 Protein of unknown function DUF1826 Y89_6275 IPR003495 CobW/HypB/UreG domain Y89_6275 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Y89_6275 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6276 IPR000962 Zinc finger, DksA/TraR C4-type Y89_6276 IPR012784 RNA polymerase-binding transcription factor DksA Y89_6276 IPR037187 Y89_6276 Y89_6278 IPR002508 Cell wall hydrolase/autolysin, catalytic Y89_6278 IPR021731 AMIN domain Y89_6279 IPR003801 GTP cyclohydrolase FolE2/MptA Y89_6279 IPR022838 GTP cyclohydrolase FolE2 Y89_6280 IPR001451 Bacterial transferase hexapeptide repeat Y89_6280 IPR011004 Trimeric LpxA-like Y89_6281 IPR002195 Dihydroorotase, conserved site Y89_6281 IPR006680 Amidohydrolase 1 Y89_6281 IPR011059 Metal-dependent hydrolase, composite domain Y89_6281 IPR032466 Y89_6281 Y89_6282 IPR001466 Beta-lactamase-related Y89_6282 IPR012338 Beta-lactamase/transpeptidase-like Y89_6283 IPR015001 Protein of unknown function DUF1850 Y89_6284 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Y89_6284 IPR011853 TRAP transporter, 4TM/12TM fusion protein Y89_6285 IPR011852 TRAP transporter solute receptor, TAXI family Y89_6286 IPR003333 Mycolic acid cyclopropane synthase Y89_6286 IPR020803 Polyketide synthase, methyltransferase domain Y89_6286 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_6287 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial Y89_6287 IPR023214 HAD-like domain Y89_6287 IPR036412 Y89_6287 Y89_6288 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG Y89_6288 IPR011701 Major facilitator superfamily Y89_6288 IPR036259 Y89_6288 Y89_6289 IPR001347 Sugar isomerase (SIS) Y89_6289 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising Y89_6289 IPR029055 Nucleophile aminohydrolases, N-terminal Y89_6290 IPR001034 HTH DeoR N-terminal domain Y89_6290 IPR014036 DeoR C-terminal sensor domain Y89_6290 IPR018356 Transcription regulator, HTH DeoR-type, conserved site Y89_6290 IPR036388 Y89_6290 Y89_6290 IPR036390 Y89_6290 Y89_6290 IPR037171 Y89_6290 Y89_6291 IPR011055 Duplicated hybrid motif Y89_6291 IPR016047 Peptidase M23 Y89_6292 IPR001451 Bacterial transferase hexapeptide repeat Y89_6292 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase Y89_6292 IPR011004 Trimeric LpxA-like Y89_6292 IPR025877 MobA-like NTP transferase domain Y89_6292 IPR029044 Nucleotide-diphospho-sugar transferases Y89_6293 IPR001469 ATPase, F1 complex, delta/epsilon subunit Y89_6293 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal Y89_6293 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain Y89_6293 IPR036771 Y89_6293 Y89_6293 IPR036794 Y89_6293 Y89_6294 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Y89_6294 IPR003593 AAA+ ATPase domain Y89_6294 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain Y89_6294 IPR005722 ATPase, F1 complex, beta subunit Y89_6294 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Y89_6294 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal Y89_6294 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6294 IPR036121 Y89_6294 Y89_6295 IPR000131 ATPase, F1 complex, gamma subunit Y89_6295 IPR023632 ATPase, F1 complex, gamma subunit conserved site Y89_6295 IPR035968 Y89_6295 Y89_6296 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Y89_6296 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal Y89_6296 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain Y89_6296 IPR005294 ATPase, F1 complex, alpha subunit Y89_6296 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Y89_6296 IPR023366 ATP synthase subunit alpha-like domain Y89_6296 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6296 IPR036121 Y89_6296 Y89_6296 IPR038376 Y89_6296 Y89_6297 IPR000711 ATPase, OSCP/delta subunit Y89_6297 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Y89_6298 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast Y89_6298 IPR005864 ATPase, F0 complex, subunit B, bacterial Y89_6298 IPR028987 F-type ATP synthase subunit B-like, membrane domain Y89_6299 IPR000454 ATPase, F0 complex, subunit C Y89_6299 IPR002379 V-ATPase proteolipid subunit C-like domain Y89_6299 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast Y89_6299 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Y89_6299 IPR035921 Y89_6299 Y89_6299 IPR038662 Y89_6299 Y89_6300 IPR000568 ATPase, F0 complex, subunit A Y89_6300 IPR023011 ATPase, F0 complex, subunit A, active site Y89_6300 IPR035908 Y89_6300 Y89_6301 IPR005598 ATP synthase protein I Y89_6302 IPR003115 ParB/Sulfiredoxin Y89_6302 IPR004437 ParB/RepB/Spo0J partition protein family Y89_6302 IPR036086 Y89_6302 Y89_6303 IPR025669 AAA domain Y89_6303 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6304 IPR003682 rRNA small subunit methyltransferase G Y89_6304 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_6305 IPR002218 Glucose-inhibited division protein A-related Y89_6305 IPR004416 Glucose-inhibited division protein A Y89_6305 IPR020595 Glucose-inhibited division protein A-related, conserved site Y89_6305 IPR026904 GidA associated domain 3 Y89_6305 IPR036188 Y89_6305 Y89_6307 IPR004520 tRNA modification GTPase MnmE Y89_6307 IPR005225 Small GTP-binding protein domain Y89_6307 IPR006073 GTP binding domain Y89_6307 IPR018948 GTP-binding protein TrmE, N-terminal Y89_6307 IPR025867 tRNA modification GTPase MnmE C-terminal domain Y89_6307 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Y89_6307 IPR027368 tRNA modification GTPase MnmE domain 2 Y89_6307 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6308 IPR001708 Membrane insertase OXA1/ALB3/YidC Y89_6308 IPR019998 Membrane insertase YidC Y89_6308 IPR028053 Membrane insertase YidC, N-terminal Y89_6308 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Y89_6308 IPR038210 Y89_6308 Y89_6308 IPR038221 Y89_6308 Y89_6309 IPR000100 Ribonuclease P Y89_6309 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Y89_6309 IPR020539 Ribonuclease P, conserved site Y89_6309 IPR020568 Ribosomal protein S5 domain 2-type fold Y89_6310 IPR000271 Ribosomal protein L34 Y89_6310 IPR020939 Ribosomal protein L34, conserved site Y89_6311 IPR009649 TraU Y89_6311 IPR026331 Integrating conjugative element protein PFL_4710 Y89_6312 IPR021204 Integrating conjugative element protein, PFL4711 Y89_6314 IPR012931 TraG-like, N-terminal Y89_6316 IPR010985 Ribbon-helix-helix Y89_6316 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor Y89_6316 IPR038296 Y89_6316 Y89_6317 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Y89_6317 IPR035093 Y89_6317 Y89_6320 IPR001207 Transposase, mutator type Y89_6321 IPR011093 Domain of unknown function DUF1528, C-terminal Y89_6321 IPR011119 Uncharacterised domain, helicase/relaxase, putative Y89_6321 IPR022391 Integrating conjugative element relaxase, PFGI-1 class Y89_6321 IPR036388 Y89_6321 Y89_6321 IPR036390 Y89_6321 Y89_6322 IPR002104 Integrase, catalytic Y89_6322 IPR004107 Integrase, SAM-like, N-terminal Y89_6322 IPR010998 Integrase, Lambda-type, N-terminal Y89_6322 IPR011010 DNA breaking-rejoining enzyme, catalytic core Y89_6322 IPR013762 Integrase-like, catalytic core Y89_6323 IPR025669 AAA domain Y89_6323 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6327 IPR016868 Bacteriophage B3, Orf5 Y89_6327 IPR024498 Domain of unknown function DUF2786 Y89_6328 IPR003615 HNH nuclease Y89_6330 IPR007692 DNA helicase, DnaB type Y89_6330 IPR007693 DNA helicase, DnaB-like, N-terminal Y89_6330 IPR007694 DNA helicase, DnaB-like, C-terminal Y89_6330 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Y89_6330 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6330 IPR036185 Y89_6330 Y89_6336 IPR007358 Nucleoid-associated protein NdpA Y89_6337 IPR012263 Adenine modification methylase, M.EcoRV-type Y89_6337 IPR012327 D12 class N6 adenine-specific DNA methyltransferase Y89_6337 IPR023095 Adenine-specific methyltransferase, domain 2 Y89_6337 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_6338 IPR005569 Arc-like DNA binding Y89_6338 IPR010985 Ribbon-helix-helix Y89_6338 IPR013321 Arc-type ribbon-helix-helix Y89_6339 IPR003115 ParB/Sulfiredoxin Y89_6339 IPR020900 Arginine repressor, DNA-binding domain Y89_6339 IPR022304 Integrating conjugative element, PFGI-1, ParB Y89_6339 IPR036086 Y89_6339 Y89_6340 IPR021364 Protein of unknown function DUF2857 Y89_6344 IPR014996 Integrating conjugative element protein, PFL4669 Y89_6345 IPR021502 Protein of unknown function DUF3158 Y89_6346 IPR014054 Bacteriophage regulatory protein, Rha family Y89_6347 IPR000424 Primosome PriB/single-strand DNA-binding Y89_6347 IPR011344 Single-stranded DNA-binding protein Y89_6347 IPR012340 Nucleic acid-binding, OB-fold Y89_6348 IPR003601 DNA topoisomerase, type IA, domain 2 Y89_6348 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Y89_6348 IPR005733 DNA topoisomerase I, bacterial-type Y89_6348 IPR006171 Toprim domain Y89_6348 IPR013497 DNA topoisomerase, type IA, central Y89_6348 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Y89_6348 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Y89_6348 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Y89_6348 IPR023405 DNA topoisomerase, type IA, core domain Y89_6348 IPR023406 DNA topoisomerase, type IA, active site Y89_6348 IPR028612 DNA topoisomerase I, type IA Y89_6350 IPR000330 SNF2-related Y89_6350 IPR001650 Helicase, C-terminal Y89_6350 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_6350 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6350 IPR038718 Y89_6350 Y89_6351 IPR001387 Cro/C1-type helix-turn-helix domain Y89_6351 IPR010982 Lambda repressor-like, DNA-binding domain Y89_6351 IPR014057 Addiction module antidote protein, HI1420 Y89_6352 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal Y89_6352 IPR022260 Integrating conjugative element protein PilL, PFGI-1 Y89_6353 IPR004846 Type II/III secretion system Y89_6353 IPR011514 Secretin, N-terminal Y89_6353 IPR013359 Pilus formation type IVB, outer membrane PilN Y89_6354 IPR009663 Pilin accessory predicted Y89_6355 IPR022753 Type IV pilus biogenesis PilP Y89_6356 IPR001482 Type II secretion system protein E Y89_6356 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6357 IPR018076 Type II secretion system F domain Y89_6358 IPR014911 Type 4 secretion system, PilS, N-terminal Y89_6359 IPR001482 Type II secretion system protein E Y89_6359 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6360 IPR007001 Bacterial shufflon protein, N-terminal Y89_6361 IPR009987 PilM, inner membrane Y89_6362 IPR006842 Transposase (putative), YhgA-like Y89_6362 IPR025587 Domain of unknown function DUF4351 Y89_6366 IPR021960 Protein of unknown function DUF3577 Y89_6371 IPR021693 Protein of unknown function DUF3275 Y89_6376 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Y89_6376 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_6377 IPR001650 Helicase, C-terminal Y89_6377 IPR006935 Helicase/UvrB domain Y89_6377 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Y89_6377 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6377 IPR038718 Y89_6377 Y89_6378 IPR009003 Trypsin-like cysteine/serine peptidase domain Y89_6378 IPR018114 Peptidase S1, trypsin family, active site Y89_6380 IPR022293 Integrating conjugative element protein, PFL4693 Y89_6381 IPR023346 Lysozyme-like domain Y89_6382 IPR021300 Integrating conjugative element protein, PFL4695 Y89_6384 IPR022458 Conjugative coupling factor TraG/TraD Y89_6384 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 Y89_6384 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6384 IPR032689 Y89_6384 Y89_6385 IPR022266 Integrating conjugative element protein, PFL4697-type Y89_6386 IPR014017 DNA helicase, UvrD-like, C-terminal Y89_6386 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6389 IPR019110 Uncharacterised protein family, RAQPRD Y89_6390 IPR021676 Protein of unknown function DUF3262 Y89_6391 IPR021356 Integrating conjugative element protein PFL4702 Y89_6392 IPR021877 Protein of unknown function DUF3487 Y89_6393 IPR021548 Protein of unknown function DUF2895 Y89_6394 IPR021844 Integrating conjugative element protein, PFL4704 Y89_6395 IPR021207 Integrating conjugative element protein, PFL4705 Y89_6396 IPR022262 Lipoprotein, putative Y89_6397 IPR002543 FtsK domain Y89_6397 IPR022303 Conjugative transfer ATPase Y89_6397 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase Y89_6397 IPR027417 P-loop containing nucleoside triphosphate hydrolase Y89_6399 IPR012336 Thioredoxin-like fold Y89_6399 IPR036249 Y89_6399 Y89_6400 IPR001525 C-5 cytosine methyltransferase Y89_6400 IPR018117 DNA methylase, C-5 cytosine-specific, active site Y89_6400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Y89_6401 IPR011856 tRNA endonuclease-like domain Y89_6401 IPR036890 Y89_6401