locus-tag class description AOC03_00010 PF11940 Domain of unknown function (DUF3458) Ig-like fold AOC03_00010 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AOC03_00010 PF01433 Peptidase family M1 domain AOC03_00015 PF00793 DAHP synthetase I family AOC03_00020 PF02684 Lipid-A-disaccharide synthetase AOC03_00025 PF01351 Ribonuclease HII AOC03_00040 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AOC03_00045 PF16653 Saccharopine dehydrogenase C-terminal domain AOC03_00045 PF03435 Saccharopine dehydrogenase NADP binding domain AOC03_00055 PF05154 TM2 domain AOC03_00100 PF02567 Phenazine biosynthesis-like protein AOC03_00105 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AOC03_00115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AOC03_00120 PF08676 MutL C terminal dimerisation domain AOC03_00120 PF01119 DNA mismatch repair protein, C-terminal domain AOC03_00130 PF17209 Hfq protein AOC03_00135 PF01380 SIS domain AOC03_00135 PF00571 CBS domain AOC03_00150 PF03968 OstA-like protein AOC03_00155 PF12399 Branched-chain amino acid ATP-binding cassette transporter AOC03_00155 PF00005 ABC transporter AOC03_00160 PF18073 Rubredoxin metal binding domain AOC03_00165 PF05036 Sporulation related domain AOC03_00165 PF03330 Lytic transglycolase AOC03_00170 PF01098 Cell cycle protein AOC03_00190 PF05193 Peptidase M16 inactive domain AOC03_00190 PF00675 Insulinase (Peptidase family M16) AOC03_00195 PF00448 SRP54-type protein, GTPase domain AOC03_00195 PF02881 SRP54-type protein, helical bundle domain AOC03_00200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AOC03_00200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AOC03_00205 PF01709 Transcriptional regulator AOC03_00210 PF00027 Cyclic nucleotide-binding domain AOC03_00210 PF00520 Ion transport protein AOC03_00215 PF03109 ABC1 family AOC03_00220 PF01220 Dehydroquinase class II AOC03_00225 PF00313 'Cold-shock' DNA-binding domain AOC03_00230 PF00270 DEAD/DEAH box helicase AOC03_00230 PF00271 Helicase conserved C-terminal domain AOC03_00250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AOC03_00250 PF01565 FAD binding domain AOC03_00255 PF01451 Low molecular weight phosphotyrosine protein phosphatase AOC03_00260 PF01479 S4 domain AOC03_00270 PF00585 C-terminal regulatory domain of Threonine dehydratase AOC03_00270 PF00291 Pyridoxal-phosphate dependent enzyme AOC03_00275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AOC03_00280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AOC03_00280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AOC03_00285 PF01168 Alanine racemase, N-terminal domain AOC03_00285 PF00842 Alanine racemase, C-terminal domain AOC03_00290 PF00772 DnaB-like helicase N terminal domain AOC03_00290 PF03796 DnaB-like helicase C terminal domain AOC03_00300 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AOC03_00305 PF00398 Ribosomal RNA adenine dimethylase AOC03_00310 PF00149 Calcineurin-like phosphoesterase AOC03_00320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AOC03_00320 PF02770 Acyl-CoA dehydrogenase, middle domain AOC03_00320 PF12806 Acetyl-CoA dehydrogenase C-terminal like AOC03_00320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AOC03_00325 PF12806 Acetyl-CoA dehydrogenase C-terminal like AOC03_00325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AOC03_00325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AOC03_00325 PF02770 Acyl-CoA dehydrogenase, middle domain AOC03_00330 PF00990 Diguanylate cyclase, GGDEF domain AOC03_00330 PF00563 EAL domain AOC03_00330 PF03707 Bacterial signalling protein N terminal repeat AOC03_00335 PF04452 RNA methyltransferase AOC03_00340 PF02219 Methylenetetrahydrofolate reductase AOC03_00345 PF05221 S-adenosyl-L-homocysteine hydrolase AOC03_00345 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AOC03_00350 PF00593 TonB dependent receptor AOC03_00350 PF07715 TonB-dependent Receptor Plug Domain AOC03_00355 PF00924 Mechanosensitive ion channel AOC03_00365 PF00218 Indole-3-glycerol phosphate synthase AOC03_00370 PF02885 Glycosyl transferase family, helical bundle domain AOC03_00370 PF00591 Glycosyl transferase family, a/b domain AOC03_00375 PF00117 Glutamine amidotransferase class-I AOC03_00380 PF00120 Glutamine synthetase, catalytic domain AOC03_00380 PF03951 Glutamine synthetase, beta-Grasp domain AOC03_00395 PF04011 LemA family AOC03_00400 PF01435 Peptidase family M48 AOC03_00410 PF00266 Aminotransferase class-V AOC03_00415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AOC03_00425 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_00430 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_00430 PF12911 N-terminal TM domain of oligopeptide transport permease C AOC03_00435 PF00005 ABC transporter AOC03_00435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AOC03_00440 PF01227 GTP cyclohydrolase I AOC03_00455 PF00939 Sodium:sulfate symporter transmembrane region AOC03_00460 PF08007 Cupin superfamily protein AOC03_00470 PF00206 Lyase AOC03_00470 PF08328 Adenylosuccinate lyase C-terminal AOC03_00480 PF02542 YgbB family AOC03_00485 PF00462 Glutaredoxin AOC03_00495 PF01134 Glucose inhibited division protein A AOC03_00495 PF13932 GidA associated domain AOC03_00505 PF02423 Ornithine cyclodeaminase/mu-crystallin family AOC03_00510 PF00296 Luciferase-like monooxygenase AOC03_00515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_00515 PF03466 LysR substrate binding domain AOC03_00520 PF07690 Major Facilitator Superfamily AOC03_00525 PF17827 PrmC N-terminal domain AOC03_00525 PF13847 Methyltransferase domain AOC03_00530 PF00581 Rhodanese-like domain AOC03_00530 PF00899 ThiF family AOC03_00535 PF03109 ABC1 family AOC03_00545 PF01037 Lrp/AsnC ligand binding domain AOC03_00545 PF13404 AsnC-type helix-turn-helix domain AOC03_00550 PF00682 HMGL-like AOC03_00550 PF08502 LeuA allosteric (dimerisation) domain AOC03_00560 PF02785 Biotin carboxylase C-terminal domain AOC03_00560 PF00289 Biotin carboxylase, N-terminal domain AOC03_00560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AOC03_00565 PF00364 Biotin-requiring enzyme AOC03_00570 PF01554 MatE AOC03_00580 PF04055 Radical SAM superfamily AOC03_00580 PF06969 HemN C-terminal domain AOC03_00595 PF00588 SpoU rRNA Methylase family AOC03_00620 PF00107 Zinc-binding dehydrogenase AOC03_00620 PF16884 N-terminal domain of oxidoreductase AOC03_00625 PF03710 Glutamate-ammonia ligase adenylyltransferase AOC03_00625 PF08335 GlnD PII-uridylyltransferase AOC03_00630 PF01063 Amino-transferase class IV AOC03_00655 PF13439 Glycosyltransferase Family 4 AOC03_00655 PF00534 Glycosyl transferases group 1 AOC03_00665 PF00534 Glycosyl transferases group 1 AOC03_00670 PF00534 Glycosyl transferases group 1 AOC03_00690 PF02938 GAD domain AOC03_00690 PF00152 tRNA synthetases class II (D, K and N) AOC03_00690 PF01336 OB-fold nucleic acid binding domain AOC03_00695 PF01343 Peptidase family S49 AOC03_00695 PF08496 Peptidase family S49 N-terminal AOC03_00710 PF00106 short chain dehydrogenase AOC03_00715 PF03649 Uncharacterised protein family (UPF0014) AOC03_00720 PF00005 ABC transporter AOC03_00725 PF03061 Thioesterase superfamily AOC03_00730 PF03372 Endonuclease/Exonuclease/phosphatase family AOC03_00735 PF01960 ArgJ family AOC03_00745 PF03315 Serine dehydratase beta chain AOC03_00745 PF03313 Serine dehydratase alpha chain AOC03_00750 PF00860 Permease family AOC03_00765 PF00561 alpha/beta hydrolase fold AOC03_00770 PF00301 Rubredoxin AOC03_00775 PF00156 Phosphoribosyl transferase domain AOC03_00780 PF00923 Transaldolase/Fructose-6-phosphate aldolase AOC03_00785 PF01842 ACT domain AOC03_00785 PF01817 Chorismate mutase type II AOC03_00785 PF00800 Prephenate dehydratase AOC03_00790 PF00155 Aminotransferase class I and II AOC03_00795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AOC03_00800 PF00892 EamA-like transporter family AOC03_00805 PF02152 Dihydroneopterin aldolase AOC03_00820 PF04343 Protein of unknown function, DUF488 AOC03_00825 PF00132 Bacterial transferase hexapeptide (six repeats) AOC03_00835 PF00588 SpoU rRNA Methylase family AOC03_00845 PF07733 Bacterial DNA polymerase III alpha NTPase domain AOC03_00845 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AOC03_00845 PF14579 Helix-hairpin-helix motif AOC03_00845 PF02811 PHP domain AOC03_00845 PF01336 OB-fold nucleic acid binding domain AOC03_00850 PF01266 FAD dependent oxidoreductase AOC03_00855 PF01235 Sodium:alanine symporter family AOC03_00860 PF00171 Aldehyde dehydrogenase family AOC03_00865 PF00701 Dihydrodipicolinate synthetase family AOC03_00870 PF01266 FAD dependent oxidoreductase AOC03_00875 PF05544 Proline racemase AOC03_00905 PF00486 Transcriptional regulatory protein, C terminal AOC03_00905 PF00072 Response regulator receiver domain AOC03_00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_00910 PF00512 His Kinase A (phospho-acceptor) domain AOC03_00910 PF00672 HAMP domain AOC03_00910 PF16527 Two-component sensor protein CpxA, periplasmic domain AOC03_00935 PF01895 PhoU domain AOC03_00940 PF00005 ABC transporter AOC03_00945 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_00950 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_00955 PF12849 PBP superfamily domain AOC03_00960 PF07992 Pyridine nucleotide-disulphide oxidoreductase AOC03_00960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AOC03_00965 PF00512 His Kinase A (phospho-acceptor) domain AOC03_00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_00965 PF08521 Two-component sensor kinase N-terminal AOC03_00970 PF00072 Response regulator receiver domain AOC03_00970 PF00486 Transcriptional regulatory protein, C terminal AOC03_00975 PF08019 Phosphoethanolamine transferase EptA/EptB AOC03_00975 PF00884 Sulfatase AOC03_00990 PF00486 Transcriptional regulatory protein, C terminal AOC03_00990 PF00072 Response regulator receiver domain AOC03_00995 PF08521 Two-component sensor kinase N-terminal AOC03_00995 PF00512 His Kinase A (phospho-acceptor) domain AOC03_00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_01010 PF02424 ApbE family AOC03_01025 PF09335 SNARE associated Golgi protein AOC03_01030 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AOC03_01040 PF03949 Malic enzyme, NAD binding domain AOC03_01040 PF00390 Malic enzyme, N-terminal domain AOC03_01050 PF01867 CRISPR associated protein Cas1 AOC03_01050 PF01930 Domain of unknown function DUF83 AOC03_01075 PF17946 RecC C-terminal domain AOC03_01080 PF13361 UvrD-like helicase C-terminal domain AOC03_01080 PF00580 UvrD/REP helicase N-terminal domain AOC03_01080 PF12705 PD-(D/E)XK nuclease superfamily AOC03_01085 PF13538 UvrD-like helicase C-terminal domain AOC03_01100 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AOC03_01100 PF01926 50S ribosome-binding GTPase AOC03_01105 PF11067 Protein of unknown function (DUF2868) AOC03_01110 PF00860 Permease family AOC03_01115 PF04055 Radical SAM superfamily AOC03_01115 PF00919 Uncharacterized protein family UPF0004 AOC03_01120 PF03972 MmgE/PrpD family AOC03_01135 PF00005 ABC transporter AOC03_01135 PF00664 ABC transporter transmembrane region AOC03_01140 PF04303 PrpF protein AOC03_01150 PF00694 Aconitase C-terminal domain AOC03_01150 PF00330 Aconitase family (aconitate hydratase) AOC03_01155 PF00285 Citrate synthase, C-terminal domain AOC03_01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_01170 PF03466 LysR substrate binding domain AOC03_01180 PF00849 RNA pseudouridylate synthase AOC03_01185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AOC03_01185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AOC03_01190 PF01479 S4 domain AOC03_01190 PF00849 RNA pseudouridylate synthase AOC03_01195 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain AOC03_01195 PF01113 Dihydrodipicolinate reductase, N-terminus AOC03_01210 PF04960 Glutaminase AOC03_01215 PF00206 Lyase AOC03_01215 PF10415 Fumarase C C-terminus AOC03_01220 PF00375 Sodium:dicarboxylate symporter family AOC03_01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_01225 PF03466 LysR substrate binding domain AOC03_01230 PF00043 Glutathione S-transferase, C-terminal domain AOC03_01230 PF02798 Glutathione S-transferase, N-terminal domain AOC03_01240 PF00174 Oxidoreductase molybdopterin binding domain AOC03_01255 PF13276 HTH-like domain AOC03_01255 PF13333 Integrase core domain AOC03_01255 PF00665 Integrase core domain AOC03_01280 PF00665 Integrase core domain AOC03_01280 PF13333 Integrase core domain AOC03_01280 PF13276 HTH-like domain AOC03_01285 PF01527 Transposase AOC03_01335 PF00565 Staphylococcal nuclease homologue AOC03_01340 PF03120 NAD-dependent DNA ligase OB-fold domain AOC03_01340 PF00533 BRCA1 C Terminus (BRCT) domain AOC03_01340 PF01653 NAD-dependent DNA ligase adenylation domain AOC03_01340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AOC03_01340 PF12826 Helix-hairpin-helix motif AOC03_01355 PF00271 Helicase conserved C-terminal domain AOC03_01355 PF08494 DEAD/H associated AOC03_01355 PF00270 DEAD/DEAH box helicase AOC03_01465 PF05724 Thiopurine S-methyltransferase (TPMT) AOC03_01490 PF04299 Putative FMN-binding domain AOC03_01500 PF06906 Protein of unknown function (DUF1272) AOC03_01515 PF00892 EamA-like transporter family AOC03_01535 PF02567 Phenazine biosynthesis-like protein AOC03_01555 PF00440 Bacterial regulatory proteins, tetR family AOC03_01555 PF08359 YsiA-like protein, C-terminal region AOC03_01560 PF00857 Isochorismatase family AOC03_01565 PF00958 GMP synthase C terminal domain AOC03_01565 PF02540 NAD synthase AOC03_01565 PF00117 Glutamine amidotransferase class-I AOC03_01585 PF00155 Aminotransferase class I and II AOC03_01585 PF00392 Bacterial regulatory proteins, gntR family AOC03_01630 PF14659 Phage integrase, N-terminal SAM-like domain AOC03_01630 PF00589 Phage integrase family AOC03_01630 PF13356 Arm DNA-binding domain AOC03_01645 PF06167 Glucose-regulated metallo-peptidase M90 AOC03_01650 PF14403 Circularly permuted ATP-grasp type 2 AOC03_01670 PF00270 DEAD/DEAH box helicase AOC03_01670 PF00271 Helicase conserved C-terminal domain AOC03_01680 PF02798 Glutathione S-transferase, N-terminal domain AOC03_01685 PF07690 Major Facilitator Superfamily AOC03_01690 PF00210 Ferritin-like domain AOC03_01695 PF00210 Ferritin-like domain AOC03_01705 PF01022 Bacterial regulatory protein, arsR family AOC03_01715 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_01720 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_01740 PF01747 ATP-sulfurylase AOC03_01740 PF14306 PUA-like domain AOC03_01745 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AOC03_01745 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AOC03_01755 PF01507 Phosphoadenosine phosphosulfate reductase family AOC03_01760 PF14824 Sirohaem biosynthesis protein central AOC03_01760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AOC03_01760 PF10414 Sirohaem synthase dimerisation region AOC03_01765 PF00149 Calcineurin-like phosphoesterase AOC03_01765 PF12320 Type 5 capsule protein repressor C-terminal domain AOC03_01770 PF13476 AAA domain AOC03_01790 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AOC03_01790 PF02843 Phosphoribosylglycinamide synthetase, C domain AOC03_01790 PF02844 Phosphoribosylglycinamide synthetase, N domain AOC03_01795 PF03109 ABC1 family AOC03_01800 PF02390 Putative methyltransferase AOC03_01805 PF00202 Aminotransferase class-III AOC03_01810 PF03466 LysR substrate binding domain AOC03_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_01815 PF12169 DNA polymerase III subunits gamma and tau domain III AOC03_01815 PF12170 DNA polymerase III tau subunit V interacting with alpha AOC03_01820 PF00152 tRNA synthetases class II (D, K and N) AOC03_01820 PF01336 OB-fold nucleic acid binding domain AOC03_01830 PF00472 RF-1 domain AOC03_01830 PF03462 PCRF domain AOC03_01835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AOC03_01835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AOC03_01845 PF13521 AAA domain AOC03_01845 PF01381 Helix-turn-helix AOC03_01850 PF00072 Response regulator receiver domain AOC03_01850 PF12833 Helix-turn-helix domain AOC03_01855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_01855 PF00512 His Kinase A (phospho-acceptor) domain AOC03_01860 PF00892 EamA-like transporter family AOC03_01865 PF11898 Domain of unknown function (DUF3418) AOC03_01865 PF00270 DEAD/DEAH box helicase AOC03_01865 PF04408 Helicase associated domain (HA2) AOC03_01865 PF00271 Helicase conserved C-terminal domain AOC03_01865 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AOC03_01875 PF01979 Amidohydrolase family AOC03_01885 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AOC03_01885 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AOC03_01890 PF03450 CO dehydrogenase flavoprotein C-terminal domain AOC03_01890 PF00941 FAD binding domain in molybdopterin dehydrogenase AOC03_01900 PF14850 DNA-binding domain of Proline dehydrogenase AOC03_01900 PF00171 Aldehyde dehydrogenase family AOC03_01900 PF01619 Proline dehydrogenase AOC03_01900 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AOC03_01905 PF00860 Permease family AOC03_01910 PF01618 MotA/TolQ/ExbB proton channel family AOC03_01915 PF02472 Biopolymer transport protein ExbD/TolR AOC03_01925 PF07676 WD40-like Beta Propeller Repeat AOC03_01925 PF04052 TolB amino-terminal domain AOC03_01935 PF01593 Flavin containing amine oxidoreductase AOC03_01940 PF00034 Cytochrome c AOC03_01940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AOC03_01950 PF01593 Flavin containing amine oxidoreductase AOC03_01955 PF00034 Cytochrome c AOC03_01955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AOC03_01970 PF00849 RNA pseudouridylate synthase AOC03_01970 PF01479 S4 domain AOC03_01975 PF13525 Outer membrane lipoprotein AOC03_01980 PF08275 DNA primase catalytic core, N-terminal domain AOC03_01980 PF13662 Toprim domain AOC03_01980 PF01807 CHC2 zinc finger AOC03_01980 PF08278 DNA primase DnaG DnaB-binding AOC03_01980 PF10410 DnaB-helicase binding domain of primase AOC03_01985 PF04546 Sigma-70, non-essential region AOC03_01985 PF03979 Sigma-70 factor, region 1.1 AOC03_01985 PF00140 Sigma-70 factor, region 1.2 AOC03_01985 PF04542 Sigma-70 region 2 AOC03_01985 PF04545 Sigma-70, region 4 AOC03_01985 PF04539 Sigma-70 region 3 AOC03_02010 PF03477 ATP cone domain AOC03_02010 PF02867 Ribonucleotide reductase, barrel domain AOC03_02010 PF00317 Ribonucleotide reductase, all-alpha domain AOC03_02025 PF00268 Ribonucleotide reductase, small chain AOC03_02030 PF00111 2Fe-2S iron-sulfur cluster binding domain AOC03_02035 PF13180 PDZ domain AOC03_02040 PF01784 NIF3 (NGG1p interacting factor 3) AOC03_02045 PF00497 Bacterial extracellular solute-binding proteins, family 3 AOC03_02045 PF01464 Transglycosylase SLT domain AOC03_02050 PF01464 Transglycosylase SLT domain AOC03_02050 PF01476 LysM domain AOC03_02050 PF01464 Transglycosylase SLT domain AOC03_02050 PF01476 LysM domain AOC03_02060 PF00571 CBS domain AOC03_02060 PF03471 Transporter associated domain AOC03_02060 PF01595 Cyclin M transmembrane N-terminal domain AOC03_02065 PF02699 Preprotein translocase subunit AOC03_02070 PF02355 Protein export membrane protein AOC03_02070 PF13721 SecD export protein N-terminal TM region AOC03_02070 PF07549 SecD/SecF GG Motif AOC03_02075 PF02355 Protein export membrane protein AOC03_02075 PF07549 SecD/SecF GG Motif AOC03_02080 PF01554 MatE AOC03_02095 PF00156 Phosphoribosyl transferase domain AOC03_02105 PF01180 Dihydroorotate dehydrogenase AOC03_02140 PF03969 AFG1-like ATPase AOC03_02155 PF13742 OB-fold nucleic acid binding domain AOC03_02155 PF02601 Exonuclease VII, large subunit AOC03_02165 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AOC03_02165 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AOC03_02170 PF01625 Peptide methionine sulfoxide reductase AOC03_02170 PF01641 SelR domain AOC03_02170 PF08534 Redoxin AOC03_02175 PF00005 ABC transporter AOC03_02175 PF00571 CBS domain AOC03_02180 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_02185 PF00171 Aldehyde dehydrogenase family AOC03_02195 PF00719 Inorganic pyrophosphatase AOC03_02210 PF00106 short chain dehydrogenase AOC03_02215 PF01207 Dihydrouridine synthase (Dus) AOC03_02220 PF02028 BCCT, betaine/carnitine/choline family transporter AOC03_02225 PF01230 HIT domain AOC03_02235 PF00920 Dehydratase family AOC03_02245 PF01476 LysM domain AOC03_02245 PF01551 Peptidase family M23 AOC03_02250 PF01975 Survival protein SurE AOC03_02265 PF00072 Response regulator receiver domain AOC03_02265 PF09308 LuxQ, periplasmic AOC03_02265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_02265 PF00512 His Kinase A (phospho-acceptor) domain AOC03_02270 PF01926 50S ribosome-binding GTPase AOC03_02270 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AOC03_02275 PF13360 PQQ-like domain AOC03_02285 PF03129 Anticodon binding domain AOC03_02285 PF13393 Histidyl-tRNA synthetase AOC03_02290 PF04551 GcpE protein AOC03_02305 PF04055 Radical SAM superfamily AOC03_02310 PF00334 Nucleoside diphosphate kinase AOC03_02320 PF00709 Adenylosuccinate synthetase AOC03_02325 PF13393 Histidyl-tRNA synthetase AOC03_02335 PF01544 CorA-like Mg2+ transporter protein AOC03_02340 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AOC03_02340 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AOC03_02360 PF02016 LD-carboxypeptidase N-terminal domain AOC03_02360 PF17676 LD-carboxypeptidase C-terminal domain AOC03_02365 PF06803 Protein of unknown function (DUF1232) AOC03_02380 PF00929 Exonuclease AOC03_02390 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AOC03_02390 PF09297 NADH pyrophosphatase zinc ribbon domain AOC03_02390 PF00293 NUDIX domain AOC03_02395 PF04060 Putative Fe-S cluster AOC03_02400 PF10576 Iron-sulfur binding domain of endonuclease III AOC03_02400 PF00633 Helix-hairpin-helix motif AOC03_02400 PF00730 HhH-GPD superfamily base excision DNA repair protein AOC03_02405 PF00438 S-adenosylmethionine synthetase, N-terminal domain AOC03_02405 PF02772 S-adenosylmethionine synthetase, central domain AOC03_02405 PF02773 S-adenosylmethionine synthetase, C-terminal domain AOC03_02420 PF10431 C-terminal, D2-small domain, of ClpB protein AOC03_02420 PF02861 Clp amino terminal domain, pathogenicity island component AOC03_02420 PF17871 AAA lid domain AOC03_02420 PF07724 AAA domain (Cdc48 subfamily) AOC03_02420 PF00004 ATPase family associated with various cellular activities (AAA) AOC03_02425 PF13673 Acetyltransferase (GNAT) domain AOC03_02430 PF06865 Pyrimidine/purine nucleoside phosphorylase AOC03_02435 PF03462 PCRF domain AOC03_02435 PF00472 RF-1 domain AOC03_02445 PF00132 Bacterial transferase hexapeptide (six repeats) AOC03_02455 PF00117 Glutamine amidotransferase class-I AOC03_02455 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AOC03_02460 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AOC03_02460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AOC03_02460 PF02142 MGS-like domain AOC03_02465 PF01272 Transcription elongation factor, GreA/GreB, C-term AOC03_02465 PF03449 Transcription elongation factor, N-terminal AOC03_02480 PF00171 Aldehyde dehydrogenase family AOC03_02485 PF01645 Conserved region in glutamate synthase AOC03_02490 PF09992 Phosphodiester glycosidase AOC03_02495 PF01926 50S ribosome-binding GTPase AOC03_02495 PF06071 Protein of unknown function (DUF933) AOC03_02500 PF01966 HD domain AOC03_02505 PF00440 Bacterial regulatory proteins, tetR family AOC03_02515 PF11612 Type II secretion system (T2SS), protein J AOC03_02515 PF07963 Prokaryotic N-terminal methylation motif AOC03_02535 PF01026 TatD related DNase AOC03_02545 PF00437 Type II/IV secretion system protein AOC03_02550 PF18389 TrmO C-terminal domain AOC03_02550 PF01980 tRNA-methyltransferase O AOC03_02555 PF00175 Oxidoreductase NAD-binding domain AOC03_02555 PF00970 Oxidoreductase FAD-binding domain AOC03_02570 PF11799 impB/mucB/samB family C-terminal domain AOC03_02570 PF00817 impB/mucB/samB family AOC03_02575 PF02547 Queuosine biosynthesis protein AOC03_02595 PF01416 tRNA pseudouridine synthase AOC03_02600 PF01176 Translation initiation factor 1A / IF-1 AOC03_02610 PF00180 Isocitrate/isopropylmalate dehydrogenase AOC03_02620 PF00694 Aconitase C-terminal domain AOC03_02625 PF00330 Aconitase family (aconitate hydratase) AOC03_02630 PF03466 LysR substrate binding domain AOC03_02630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_02635 PF00474 Sodium:solute symporter family AOC03_02655 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AOC03_02655 PF00355 Rieske [2Fe-2S] domain AOC03_02660 PF00032 Cytochrome b(C-terminal)/b6/petD AOC03_02660 PF00033 Cytochrome b/b6/petB AOC03_02665 PF02167 Cytochrome C1 family AOC03_02670 PF02798 Glutathione S-transferase, N-terminal domain AOC03_02670 PF00043 Glutathione S-transferase, C-terminal domain AOC03_02675 PF04386 Stringent starvation protein B AOC03_02680 PF00692 dUTPase AOC03_02685 PF10609 NUBPL iron-transfer P-loop NTPase AOC03_02690 PF03448 MgtE intracellular N domain AOC03_02690 PF00571 CBS domain AOC03_02690 PF01769 Divalent cation transporter AOC03_02700 PF01588 Putative tRNA binding domain AOC03_02700 PF09334 tRNA synthetases class I (M) AOC03_02700 PF08264 Anticodon-binding domain of tRNA AOC03_02725 PF00384 Molybdopterin oxidoreductase AOC03_02730 PF02634 FdhD/NarQ family AOC03_02735 PF00175 Oxidoreductase NAD-binding domain AOC03_02735 PF00970 Oxidoreductase FAD-binding domain AOC03_02735 PF00042 Globin AOC03_02755 PF03358 NADPH-dependent FMN reductase AOC03_02760 PF02040 Arsenical pump membrane protein AOC03_02775 PF01863 Protein of unknown function DUF45 AOC03_02790 PF00255 Glutathione peroxidase AOC03_02795 PF01641 SelR domain AOC03_02800 PF00155 Aminotransferase class I and II AOC03_02805 PF01384 Phosphate transporter family AOC03_02810 PF03976 Polyphosphate kinase 2 (PPK2) AOC03_02830 PF03109 ABC1 family AOC03_02835 PF05496 Holliday junction DNA helicase RuvB P-loop domain AOC03_02835 PF05491 RuvB C-terminal winged helix domain AOC03_02835 PF17864 RuvB AAA lid domain AOC03_02840 PF07499 RuvA, C-terminal domain AOC03_02840 PF01330 RuvA N terminal domain AOC03_02845 PF01116 Fructose-bisphosphate aldolase class-II AOC03_02855 PF00162 Phosphoglycerate kinase AOC03_02860 PF01258 Prokaryotic dksA/traR C4-type zinc finger AOC03_02865 PF02581 Thiamine monophosphate synthase AOC03_02870 PF00768 D-alanyl-D-alanine carboxypeptidase AOC03_02875 PF00196 Bacterial regulatory proteins, luxR family AOC03_02875 PF00072 Response regulator receiver domain AOC03_02885 PF00072 Response regulator receiver domain AOC03_02885 PF02954 Bacterial regulatory protein, Fis family AOC03_02885 PF00158 Sigma-54 interaction domain AOC03_02895 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AOC03_02895 PF01676 Metalloenzyme superfamily AOC03_02905 PF02075 Crossover junction endodeoxyribonuclease RuvC AOC03_02920 PF00578 AhpC/TSA family AOC03_02920 PF10417 C-terminal domain of 1-Cys peroxiredoxin AOC03_02935 PF00749 tRNA synthetases class I (E and Q), catalytic domain AOC03_02935 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AOC03_02940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AOC03_02945 PF00149 Calcineurin-like phosphoesterase AOC03_02950 PF00929 Exonuclease AOC03_02955 PF03193 RsgA GTPase AOC03_02965 PF00462 Glutaredoxin AOC03_02970 PF02556 Preprotein translocase subunit SecB AOC03_02975 PF05191 Adenylate kinase, active site lid AOC03_02985 PF03918 Cytochrome C biogenesis protein AOC03_02990 PF08534 Redoxin AOC03_02995 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AOC03_02995 PF01578 Cytochrome C assembly protein AOC03_03005 PF00905 Penicillin binding protein transpeptidase domain AOC03_03005 PF03717 Penicillin-binding Protein dimerisation domain AOC03_03015 PF00572 Ribosomal protein L13 AOC03_03020 PF00380 Ribosomal protein S9/S16 AOC03_03030 PF00579 tRNA synthetases class I (W and Y) AOC03_03035 PF02616 Segregation and condensation protein ScpA AOC03_03040 PF04079 Segregation and condensation complex subunit ScpB AOC03_03055 PF13439 Glycosyltransferase Family 4 AOC03_03055 PF00534 Glycosyl transferases group 1 AOC03_03060 PF01501 Glycosyl transferase family 8 AOC03_03060 PF00535 Glycosyl transferase family 2 AOC03_03070 PF14052 Capsule assembly protein Wzi AOC03_03075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AOC03_03080 PF17836 PglD N-terminal domain AOC03_03080 PF00132 Bacterial transferase hexapeptide (six repeats) AOC03_03080 PF14602 Hexapeptide repeat of succinyl-transferase AOC03_03085 PF02397 Bacterial sugar transferase AOC03_03090 PF13477 Glycosyl transferase 4-like AOC03_03090 PF00534 Glycosyl transferases group 1 AOC03_03105 PF13439 Glycosyltransferase Family 4 AOC03_03105 PF00534 Glycosyl transferases group 1 AOC03_03125 PF01370 NAD dependent epimerase/dehydratase family AOC03_03130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AOC03_03130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AOC03_03130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AOC03_03135 PF02719 Polysaccharide biosynthesis protein AOC03_03140 PF02706 Chain length determinant protein AOC03_03140 PF13807 G-rich domain on putative tyrosine kinase AOC03_03140 PF13614 AAA domain AOC03_03145 PF01451 Low molecular weight phosphotyrosine protein phosphatase AOC03_03150 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AOC03_03150 PF10531 SLBB domain AOC03_03150 PF02563 Polysaccharide biosynthesis/export protein AOC03_03155 PF01479 S4 domain AOC03_03155 PF00849 RNA pseudouridylate synthase AOC03_03175 PF01914 MarC family integral membrane protein AOC03_03180 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AOC03_03180 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AOC03_03190 PF02445 Quinolinate synthetase A protein AOC03_03195 PF02910 Fumarate reductase flavoprotein C-term AOC03_03195 PF00890 FAD binding domain AOC03_03200 PF03956 Lysine exporter LysO AOC03_03210 PF01494 FAD binding domain AOC03_03215 PF01494 FAD binding domain AOC03_03220 PF02562 PhoH-like protein AOC03_03225 PF02130 Uncharacterized protein family UPF0054 AOC03_03230 PF00924 Mechanosensitive ion channel AOC03_03230 PF05552 Conserved TM helix AOC03_03240 PF00175 Oxidoreductase NAD-binding domain AOC03_03240 PF00970 Oxidoreductase FAD-binding domain AOC03_03245 PF00361 Proton-conducting membrane transporter AOC03_03250 PF00361 Proton-conducting membrane transporter AOC03_03255 PF00361 Proton-conducting membrane transporter AOC03_03255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AOC03_03260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AOC03_03265 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AOC03_03270 PF12838 4Fe-4S dicluster domain AOC03_03275 PF00146 NADH dehydrogenase AOC03_03280 PF00384 Molybdopterin oxidoreductase AOC03_03280 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AOC03_03280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AOC03_03285 PF10531 SLBB domain AOC03_03285 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AOC03_03285 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AOC03_03295 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AOC03_03295 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AOC03_03300 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AOC03_03305 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AOC03_03310 PF03548 Outer membrane lipoprotein carrier protein LolA AOC03_03315 PF01016 Ribosomal L27 protein AOC03_03320 PF00829 Ribosomal prokaryotic L21 protein AOC03_03325 PF00348 Polyprenyl synthetase AOC03_03330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AOC03_03330 PF00529 HlyD membrane-fusion protein of T1SS AOC03_03335 PF00873 AcrB/AcrD/AcrF family AOC03_03340 PF02321 Outer membrane efflux protein AOC03_03345 PF00490 Delta-aminolevulinic acid dehydratase AOC03_03355 PF00580 UvrD/REP helicase N-terminal domain AOC03_03355 PF13361 UvrD-like helicase C-terminal domain AOC03_03360 PF00571 CBS domain AOC03_03360 PF03448 MgtE intracellular N domain AOC03_03360 PF01769 Divalent cation transporter AOC03_03365 PF00692 dUTPase AOC03_03370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AOC03_03370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AOC03_03370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AOC03_03370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AOC03_03375 PF00696 Amino acid kinase family AOC03_03380 PF03960 ArsC family AOC03_03385 PF09334 tRNA synthetases class I (M) AOC03_03385 PF13603 Leucyl-tRNA synthetase, Domain 2 AOC03_03385 PF00133 tRNA synthetases class I (I, L, M and V) AOC03_03385 PF08264 Anticodon-binding domain of tRNA AOC03_03400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AOC03_03405 PF00005 ABC transporter AOC03_03405 PF12704 MacB-like periplasmic core domain AOC03_03405 PF02687 FtsX-like permease family AOC03_03420 PF00753 Metallo-beta-lactamase superfamily AOC03_03425 PF18011 C-terminal domain found in long catalases AOC03_03425 PF06628 Catalase-related immune-responsive AOC03_03425 PF00199 Catalase AOC03_03490 PF01066 CDP-alcohol phosphatidyltransferase AOC03_03495 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AOC03_03505 PF07687 Peptidase dimerisation domain AOC03_03505 PF01546 Peptidase family M20/M25/M40 AOC03_03520 PF04384 Iron-sulphur cluster assembly AOC03_03530 PF02233 NAD(P) transhydrogenase beta subunit AOC03_03535 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AOC03_03540 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AOC03_03540 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AOC03_03545 PF03883 Peroxide stress protein YaaA AOC03_03555 PF00118 TCP-1/cpn60 chaperonin family AOC03_03560 PF00166 Chaperonin 10 Kd subunit AOC03_03575 PF03631 Virulence factor BrkB AOC03_03580 PF00999 Sodium/hydrogen exchanger family AOC03_03590 PF01979 Amidohydrolase family AOC03_03595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AOC03_03595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AOC03_03600 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AOC03_03605 PF08032 RNA 2'-O ribose methyltransferase substrate binding AOC03_03605 PF00588 SpoU rRNA Methylase family AOC03_03610 PF01012 Electron transfer flavoprotein domain AOC03_03610 PF00766 Electron transfer flavoprotein FAD-binding domain AOC03_03615 PF01012 Electron transfer flavoprotein domain AOC03_03620 PF00313 'Cold-shock' DNA-binding domain AOC03_03630 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AOC03_03630 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AOC03_03635 PF10369 Small subunit of acetolactate synthase AOC03_03640 PF00205 Thiamine pyrophosphate enzyme, central domain AOC03_03640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AOC03_03640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AOC03_03650 PF01256 Carbohydrate kinase AOC03_03650 PF03853 YjeF-related protein N-terminus AOC03_03655 PF08331 Domain of unknown function (DUF1730) AOC03_03660 PF01476 LysM domain AOC03_03660 PF04972 BON domain AOC03_03665 PF00550 Phosphopantetheine attachment site AOC03_03675 PF00698 Acyl transferase domain AOC03_03680 PF01783 Ribosomal L32p protein family AOC03_03690 PF04315 Elongation factor P hydroxylase AOC03_03695 PF01300 Telomere recombination AOC03_03700 PF01196 Ribosomal protein L17 AOC03_03705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AOC03_03705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AOC03_03705 PF01000 RNA polymerase Rpb3/RpoA insert domain AOC03_03710 PF01479 S4 domain AOC03_03710 PF00163 Ribosomal protein S4/S9 N-terminal domain AOC03_03715 PF00411 Ribosomal protein S11 AOC03_03720 PF00416 Ribosomal protein S13/S18 AOC03_03725 PF00444 Ribosomal protein L36 AOC03_03730 PF00344 SecY translocase AOC03_03735 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AOC03_03740 PF00327 Ribosomal protein L30p/L7e AOC03_03745 PF03719 Ribosomal protein S5, C-terminal domain AOC03_03745 PF00333 Ribosomal protein S5, N-terminal domain AOC03_03750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AOC03_03755 PF00347 Ribosomal protein L6 AOC03_03760 PF00410 Ribosomal protein S8 AOC03_03765 PF00253 Ribosomal protein S14p/S29e AOC03_03770 PF00673 ribosomal L5P family C-terminus AOC03_03770 PF00281 Ribosomal protein L5 AOC03_03775 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AOC03_03775 PF00467 KOW motif AOC03_03780 PF00238 Ribosomal protein L14p/L23e AOC03_03785 PF00366 Ribosomal protein S17 AOC03_03790 PF00831 Ribosomal L29 protein AOC03_03795 PF00252 Ribosomal protein L16p/L10e AOC03_03800 PF00189 Ribosomal protein S3, C-terminal domain AOC03_03800 PF07650 KH domain AOC03_03805 PF00237 Ribosomal protein L22p/L17e AOC03_03810 PF00203 Ribosomal protein S19 AOC03_03815 PF00181 Ribosomal Proteins L2, RNA binding domain AOC03_03815 PF03947 Ribosomal Proteins L2, C-terminal domain AOC03_03820 PF00276 Ribosomal protein L23 AOC03_03825 PF00573 Ribosomal protein L4/L1 family AOC03_03830 PF00297 Ribosomal protein L3 AOC03_03835 PF00338 Ribosomal protein S10p/S20e AOC03_03840 PF10150 Ribonuclease E/G family AOC03_03840 PF00575 S1 RNA binding domain AOC03_03845 PF02545 Maf-like protein AOC03_03855 PF04085 rod shape-determining protein MreC AOC03_03865 PF02686 Glu-tRNAGln amidotransferase C subunit AOC03_03870 PF01425 Amidase AOC03_03875 PF02637 GatB domain AOC03_03875 PF02934 GatB/GatE catalytic domain AOC03_03905 PF08245 Mur ligase middle domain AOC03_03905 PF02875 Mur ligase family, glutamate ligase domain AOC03_03910 PF01039 Carboxyl transferase domain AOC03_03915 PF00290 Tryptophan synthase alpha chain AOC03_03925 PF00291 Pyridoxal-phosphate dependent enzyme AOC03_03930 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AOC03_03935 PF03441 FAD binding domain of DNA photolyase AOC03_03935 PF00875 DNA photolyase AOC03_03945 PF01040 UbiA prenyltransferase family AOC03_03955 PF04445 Putative SAM-dependent methyltransferase AOC03_03960 PF02673 Bacitracin resistance protein BacA AOC03_03965 PF00814 Glycoprotease family AOC03_03975 PF02881 SRP54-type protein, helical bundle domain AOC03_03975 PF00448 SRP54-type protein, GTPase domain AOC03_03975 PF02978 Signal peptide binding domain AOC03_03985 PF01774 UreD urease accessory protein AOC03_03990 PF00547 Urease, gamma subunit AOC03_03995 PF00699 Urease beta subunit AOC03_04000 PF01979 Amidohydrolase family AOC03_04000 PF00449 Urease alpha-subunit, N-terminal domain AOC03_04005 PF02814 UreE urease accessory protein, N-terminal domain AOC03_04005 PF05194 UreE urease accessory protein, C-terminal domain AOC03_04010 PF01730 UreF AOC03_04015 PF02492 CobW/HypB/UreG, nucleotide-binding domain AOC03_04020 PF04955 HupE / UreJ protein AOC03_04030 PF00830 Ribosomal L28 family AOC03_04035 PF00471 Ribosomal protein L33 AOC03_04055 PF00834 Ribulose-phosphate 3 epimerase family AOC03_04065 PF00756 Putative esterase AOC03_04075 PF00183 Hsp90 protein AOC03_04075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_04090 PF02401 LytB protein AOC03_04095 PF00625 Guanylate kinase AOC03_04100 PF01192 RNA polymerase Rpb6 AOC03_04105 PF02824 TGS domain AOC03_04105 PF13291 ACT domain AOC03_04105 PF04607 Region found in RelA / SpoT proteins AOC03_04110 PF01042 Endoribonuclease L-PSP AOC03_04115 PF18074 Primosomal protein N C-terminal domain AOC03_04115 PF17764 3′ DNA-binding domain (3′BD) AOC03_04115 PF00271 Helicase conserved C-terminal domain AOC03_04115 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AOC03_04115 PF00270 DEAD/DEAH box helicase AOC03_04120 PF16916 Dimerisation domain of Zinc Transporter AOC03_04120 PF01545 Cation efflux family AOC03_04135 PF02254 TrkA-N domain AOC03_04135 PF00999 Sodium/hydrogen exchanger family AOC03_04145 PF02390 Putative methyltransferase AOC03_04150 PF00154 recA bacterial DNA recombination protein AOC03_04155 PF02631 RecX family AOC03_04160 PF00939 Sodium:sulfate symporter transmembrane region AOC03_04175 PF03937 Flavinator of succinate dehydrogenase AOC03_04180 PF00809 Pterin binding enzyme AOC03_04185 PF01434 Peptidase family M41 AOC03_04185 PF17862 AAA+ lid domain AOC03_04185 PF06480 FtsH Extracellular AOC03_04185 PF00004 ATPase family associated with various cellular activities (AAA) AOC03_04190 PF01728 FtsJ-like methyltransferase AOC03_04195 PF01985 CRS1 / YhbY (CRM) domain AOC03_04215 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AOC03_04220 PF00091 Tubulin/FtsZ family, GTPase domain AOC03_04220 PF12327 FtsZ family, C-terminal domain AOC03_04225 PF02491 SHS2 domain inserted in FTSA AOC03_04230 PF03799 Cell division protein FtsQ AOC03_04230 PF08478 POTRA domain, FtsQ-type AOC03_04235 PF01820 D-ala D-ala ligase N-terminus AOC03_04235 PF07478 D-ala D-ala ligase C-terminus AOC03_04240 PF01225 Mur ligase family, catalytic domain AOC03_04240 PF08245 Mur ligase middle domain AOC03_04240 PF02875 Mur ligase family, glutamate ligase domain AOC03_04245 PF04101 Glycosyltransferase family 28 C-terminal domain AOC03_04245 PF03033 Glycosyltransferase family 28 N-terminal domain AOC03_04250 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AOC03_04250 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AOC03_04255 PF00156 Phosphoribosyl transferase domain AOC03_04275 PF01510 N-acetylmuramoyl-L-alanine amidase AOC03_04285 PF03023 Lipid II flippase MurJ AOC03_04295 PF00583 Acetyltransferase (GNAT) family AOC03_04300 PF06574 FAD synthetase AOC03_04300 PF01687 Riboflavin kinase AOC03_04310 PF00056 lactate/malate dehydrogenase, NAD binding domain AOC03_04310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AOC03_04320 PF01464 Transglycosylase SLT domain AOC03_04320 PF01551 Peptidase family M23 AOC03_04320 PF10145 Phage-related minor tail protein AOC03_04325 PF00919 Uncharacterized protein family UPF0004 AOC03_04325 PF04055 Radical SAM superfamily AOC03_04325 PF01938 TRAM domain AOC03_04335 PF01139 tRNA-splicing ligase RtcB AOC03_04340 PF01810 LysE type translocator AOC03_04345 PF07687 Peptidase dimerisation domain AOC03_04345 PF01546 Peptidase family M20/M25/M40 AOC03_04350 PF03695 Uncharacterised protein family (UPF0149) AOC03_04370 PF05746 DALR anticodon binding domain AOC03_04370 PF02092 Glycyl-tRNA synthetase beta subunit AOC03_04375 PF02091 Glycyl-tRNA synthetase alpha subunit AOC03_04380 PF04024 PspC domain AOC03_04385 PF01381 Helix-turn-helix AOC03_04385 PF13521 AAA domain AOC03_04415 PF01435 Peptidase family M48 AOC03_04415 PF07720 Tetratricopeptide repeat AOC03_04420 PF01722 BolA-like protein AOC03_04435 PF00085 Thioredoxin AOC03_04445 PF00753 Metallo-beta-lactamase superfamily AOC03_04455 PF00916 Sulfate permease family AOC03_04455 PF01740 STAS domain AOC03_04465 PF00753 Metallo-beta-lactamase superfamily AOC03_04465 PF04273 Putative phosphatase (DUF442) AOC03_04470 PF07992 Pyridine nucleotide-disulphide oxidoreductase AOC03_04470 PF13192 Thioredoxin domain AOC03_04480 PF00578 AhpC/TSA family AOC03_04485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_04485 PF03466 LysR substrate binding domain AOC03_04515 PF00691 OmpA family AOC03_04520 PF01553 Acyltransferase AOC03_04530 PF03775 Septum formation inhibitor MinC, C-terminal domain AOC03_04535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AOC03_04540 PF03776 Septum formation topological specificity factor MinE AOC03_04545 PF01292 Prokaryotic cytochrome b561 AOC03_04555 PF00072 Response regulator receiver domain AOC03_04555 PF01339 CheB methylesterase AOC03_04560 PF01584 CheW-like domain AOC03_04560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_04560 PF01627 Hpt domain AOC03_04560 PF00072 Response regulator receiver domain AOC03_04565 PF01739 CheR methyltransferase, SAM binding domain AOC03_04565 PF03705 CheR methyltransferase, all-alpha domain AOC03_04570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AOC03_04570 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AOC03_04575 PF01584 CheW-like domain AOC03_04580 PF00072 Response regulator receiver domain AOC03_04585 PF00072 Response regulator receiver domain AOC03_04595 PF00072 Response regulator receiver domain AOC03_04595 PF00486 Transcriptional regulatory protein, C terminal AOC03_04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_04600 PF00512 His Kinase A (phospho-acceptor) domain AOC03_04600 PF00672 HAMP domain AOC03_04605 PF09383 NIL domain AOC03_04605 PF00005 ABC transporter AOC03_04610 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_04615 PF03180 NLPA lipoprotein AOC03_04620 PF07969 Amidohydrolase family AOC03_04625 PF07690 Major Facilitator Superfamily AOC03_04630 PF00248 Aldo/keto reductase family AOC03_04635 PF03100 CcmE AOC03_04645 PF01578 Cytochrome C assembly protein AOC03_04650 PF03379 CcmB protein AOC03_04655 PF00005 ABC transporter AOC03_04670 PF00850 Histone deacetylase domain AOC03_04680 PF04127 DNA / pantothenate metabolism flavoprotein AOC03_04680 PF02441 Flavoprotein AOC03_04685 PF04002 RadC-like JAB domain AOC03_04690 PF02770 Acyl-CoA dehydrogenase, middle domain AOC03_04690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AOC03_04690 PF09317 Domain of unknown function (DUF1974) AOC03_04690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AOC03_04695 PF01925 Sulfite exporter TauE/SafE AOC03_04700 PF06965 Na+/H+ antiporter 1 AOC03_04715 PF00293 NUDIX domain AOC03_04740 PF03466 LysR substrate binding domain AOC03_04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_04745 PF03601 Conserved hypothetical protein 698 AOC03_04750 PF00313 'Cold-shock' DNA-binding domain AOC03_04755 PF04304 Protein of unknown function (DUF454) AOC03_04775 PF08264 Anticodon-binding domain of tRNA AOC03_04775 PF00133 tRNA synthetases class I (I, L, M and V) AOC03_04775 PF10458 Valyl tRNA synthetase tRNA binding arm AOC03_04785 PF01906 Putative heavy-metal-binding AOC03_04820 PF04055 Radical SAM superfamily AOC03_04820 PF06968 Biotin and Thiamin Synthesis associated domain AOC03_04840 PF03725 3' exoribonuclease family, domain 2 AOC03_04840 PF01138 3' exoribonuclease family, domain 1 AOC03_04845 PF13193 AMP-binding enzyme C-terminal domain AOC03_04845 PF00501 AMP-binding enzyme AOC03_04850 PF00501 AMP-binding enzyme AOC03_04850 PF13193 AMP-binding enzyme C-terminal domain AOC03_04855 PF00092 von Willebrand factor type A domain AOC03_04855 PF12450 von Willebrand factor AOC03_04855 PF12034 Domain of unknown function (DUF3520) AOC03_04860 PF03989 DNA gyrase C-terminal domain, beta-propeller AOC03_04860 PF00521 DNA gyrase/topoisomerase IV, subunit A AOC03_04875 PF03806 AbgT putative transporter family AOC03_04890 PF13416 Bacterial extracellular solute-binding protein AOC03_04905 PF01761 3-dehydroquinate synthase AOC03_04910 PF01202 Shikimate kinase AOC03_04915 PF03958 Bacterial type II/III secretion system short domain AOC03_04915 PF00263 Bacterial type II and III secretion system protein AOC03_04915 PF11741 AMIN domain AOC03_04915 PF07660 Secretin and TonB N terminus short domain AOC03_04935 PF00012 Hsp70 protein AOC03_04940 PF00905 Penicillin binding protein transpeptidase domain AOC03_04940 PF00912 Transglycosylase AOC03_04940 PF17092 Penicillin-binding protein OB-like domain AOC03_04945 PF00623 RNA polymerase Rpb1, domain 2 AOC03_04945 PF04983 RNA polymerase Rpb1, domain 3 AOC03_04945 PF05000 RNA polymerase Rpb1, domain 4 AOC03_04945 PF04998 RNA polymerase Rpb1, domain 5 AOC03_04945 PF04997 RNA polymerase Rpb1, domain 1 AOC03_04950 PF00562 RNA polymerase Rpb2, domain 6 AOC03_04950 PF10385 RNA polymerase beta subunit external 1 domain AOC03_04950 PF04565 RNA polymerase Rpb2, domain 3 AOC03_04950 PF04561 RNA polymerase Rpb2, domain 2 AOC03_04950 PF04563 RNA polymerase beta subunit AOC03_04950 PF04560 RNA polymerase Rpb2, domain 7 AOC03_04955 PF00542 Ribosomal protein L7/L12 C-terminal domain AOC03_04955 PF16320 Ribosomal protein L7/L12 dimerisation domain AOC03_04960 PF00466 Ribosomal protein L10 AOC03_04965 PF00687 Ribosomal protein L1p/L10e family AOC03_04970 PF00298 Ribosomal protein L11, RNA binding domain AOC03_04970 PF03946 Ribosomal protein L11, N-terminal domain AOC03_04975 PF00467 KOW motif AOC03_04975 PF02357 Transcription termination factor nusG AOC03_04980 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AOC03_04990 PF03144 Elongation factor Tu domain 2 AOC03_04990 PF03143 Elongation factor Tu C-terminal domain AOC03_04990 PF00009 Elongation factor Tu GTP binding domain AOC03_04995 PF14492 Elongation Factor G, domain II AOC03_04995 PF00679 Elongation factor G C-terminus AOC03_04995 PF03144 Elongation factor Tu domain 2 AOC03_04995 PF03764 Elongation factor G, domain IV AOC03_04995 PF00009 Elongation factor Tu GTP binding domain AOC03_05000 PF00177 Ribosomal protein S7p/S5e AOC03_05005 PF00164 Ribosomal protein S12/S23 AOC03_05015 PF02801 Beta-ketoacyl synthase, C-terminal domain AOC03_05015 PF00109 Beta-ketoacyl synthase, N-terminal domain AOC03_05020 PF00425 chorismate binding enzyme AOC03_05020 PF04715 Anthranilate synthase component I, N terminal region AOC03_05025 PF00155 Aminotransferase class I and II AOC03_05030 PF00815 Histidinol dehydrogenase AOC03_05035 PF01634 ATP phosphoribosyltransferase AOC03_05040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AOC03_05045 PF01722 BolA-like protein AOC03_05050 PF00135 Carboxylesterase family AOC03_05055 PF04972 BON domain AOC03_05060 PF02021 Uncharacterised protein family UPF0102 AOC03_05065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AOC03_05070 PF00294 pfkB family carbohydrate kinase AOC03_05075 PF01053 Cys/Met metabolism PLP-dependent enzyme AOC03_05080 PF01106 NifU-like domain AOC03_05080 PF01521 Iron-sulphur cluster biosynthesis AOC03_05085 PF00293 NUDIX domain AOC03_05085 PF01467 Cytidylyltransferase-like AOC03_05090 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AOC03_05100 PF01197 Ribosomal protein L31 AOC03_05120 PF03641 Possible lysine decarboxylase AOC03_05125 PF01476 LysM domain AOC03_05125 PF01551 Peptidase family M23 AOC03_05135 PF00072 Response regulator receiver domain AOC03_05135 PF00486 Transcriptional regulatory protein, C terminal AOC03_05140 PF02580 D-Tyr-tRNA(Tyr) deacylase AOC03_05145 PF02666 Phosphatidylserine decarboxylase AOC03_05155 PF02803 Thiolase, C-terminal domain AOC03_05155 PF00108 Thiolase, N-terminal domain AOC03_05160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AOC03_05160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AOC03_05160 PF00378 Enoyl-CoA hydratase/isomerase AOC03_05165 PF00348 Polyprenyl synthetase AOC03_05170 PF01219 Prokaryotic diacylglycerol kinase AOC03_05185 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AOC03_05185 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AOC03_05190 PF01725 Ham1 family AOC03_05195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AOC03_05195 PF05697 Bacterial trigger factor protein (TF) AOC03_05195 PF05698 Bacterial trigger factor protein (TF) C-terminus AOC03_05200 PF00574 Clp protease AOC03_05205 PF07724 AAA domain (Cdc48 subfamily) AOC03_05205 PF10431 C-terminal, D2-small domain, of ClpB protein AOC03_05205 PF06689 ClpX C4-type zinc finger AOC03_05210 PF00106 short chain dehydrogenase AOC03_05230 PF05746 DALR anticodon binding domain AOC03_05230 PF00750 tRNA synthetases class I (R) AOC03_05230 PF03485 Arginyl tRNA synthetase N terminal domain AOC03_05240 PF08003 Protein of unknown function (DUF1698) AOC03_05250 PF13649 Methyltransferase domain AOC03_05255 PF01625 Peptide methionine sulfoxide reductase AOC03_05260 PF05724 Thiopurine S-methyltransferase (TPMT) AOC03_05265 PF13406 Transglycosylase SLT domain AOC03_05280 PF01177 Asp/Glu/Hydantoin racemase AOC03_05295 PF04341 Protein of unknown function, DUF485 AOC03_05300 PF00474 Sodium:solute symporter family AOC03_05310 PF00474 Sodium:solute symporter family AOC03_05320 PF01694 Rhomboid family AOC03_05365 PF00106 short chain dehydrogenase AOC03_05385 PF00579 tRNA synthetases class I (W and Y) AOC03_05385 PF01479 S4 domain AOC03_05390 PF03702 Anhydro-N-acetylmuramic acid kinase AOC03_05395 PF00109 Beta-ketoacyl synthase, N-terminal domain AOC03_05395 PF02801 Beta-ketoacyl synthase, C-terminal domain AOC03_05410 PF00854 POT family AOC03_05420 PF00795 Carbon-nitrogen hydrolase AOC03_05425 PF00571 CBS domain AOC03_05425 PF03471 Transporter associated domain AOC03_05435 PF03692 Putative zinc- or iron-chelating domain AOC03_05440 PF01738 Dienelactone hydrolase family AOC03_05455 PF01926 50S ribosome-binding GTPase AOC03_05465 PF00633 Helix-hairpin-helix motif AOC03_05465 PF00730 HhH-GPD superfamily base excision DNA repair protein AOC03_05465 PF14815 NUDIX domain AOC03_05475 PF00176 SNF2 family N-terminal domain AOC03_05475 PF00271 Helicase conserved C-terminal domain AOC03_05475 PF12137 RNA polymerase recycling family C-terminal AOC03_05475 PF18339 RapA N-terminal Tudor like domain 1 AOC03_05475 PF18337 RapA N-terminal Tudor like domain AOC03_05480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AOC03_05480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AOC03_05485 PF00849 RNA pseudouridylate synthase AOC03_05490 PF00085 Thioredoxin AOC03_05495 PF07497 Rho termination factor, RNA-binding domain AOC03_05495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AOC03_05495 PF07498 Rho termination factor, N-terminal domain AOC03_05505 PF04228 Putative neutral zinc metallopeptidase AOC03_05515 PF00216 Bacterial DNA-binding protein AOC03_05520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AOC03_05520 PF01588 Putative tRNA binding domain AOC03_05520 PF03147 Ferredoxin-fold anticodon binding domain AOC03_05520 PF03484 tRNA synthetase B5 domain AOC03_05520 PF03483 B3/4 domain AOC03_05525 PF01409 tRNA synthetases class II core domain (F) AOC03_05525 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AOC03_05530 PF00453 Ribosomal protein L20 AOC03_05535 PF01632 Ribosomal protein L35 AOC03_05545 PF01502 Phosphoribosyl-AMP cyclohydrolase AOC03_05550 PF02416 mttA/Hcf106 family AOC03_05555 PF02416 mttA/Hcf106 family AOC03_05560 PF00902 Sec-independent protein translocase protein (TatC) AOC03_05570 PF01207 Dihydrouridine synthase (Dus) AOC03_05580 PF02566 OsmC-like protein AOC03_05585 PF00293 NUDIX domain AOC03_05590 PF08240 Alcohol dehydrogenase GroES-like domain AOC03_05590 PF00107 Zinc-binding dehydrogenase AOC03_05600 PF01790 Prolipoprotein diacylglyceryl transferase AOC03_05605 PF00303 Thymidylate synthase AOC03_05610 PF00186 Dihydrofolate reductase AOC03_05615 PF01541 GIY-YIG catalytic domain AOC03_05615 PF12826 Helix-hairpin-helix motif AOC03_05615 PF08459 UvrC Helix-hairpin-helix N-terminal AOC03_05615 PF02151 UvrB/uvrC motif AOC03_05630 PF01245 Ribosomal protein L19 AOC03_05635 PF01746 tRNA (Guanine-1)-methyltransferase AOC03_05640 PF05239 PRC-barrel domain AOC03_05640 PF01782 RimM N-terminal domain AOC03_05645 PF00886 Ribosomal protein S16 AOC03_05650 PF00512 His Kinase A (phospho-acceptor) domain AOC03_05650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_05650 PF00672 HAMP domain AOC03_05660 PF00512 His Kinase A (phospho-acceptor) domain AOC03_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_05660 PF00672 HAMP domain AOC03_05665 PF00486 Transcriptional regulatory protein, C terminal AOC03_05665 PF00072 Response regulator receiver domain AOC03_05670 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AOC03_05675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AOC03_05675 PF02874 ATP synthase alpha/beta family, beta-barrel domain AOC03_05680 PF00231 ATP synthase AOC03_05685 PF00306 ATP synthase alpha/beta chain, C terminal domain AOC03_05685 PF02874 ATP synthase alpha/beta family, beta-barrel domain AOC03_05685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AOC03_05690 PF00213 ATP synthase delta (OSCP) subunit AOC03_05695 PF00430 ATP synthase B/B' CF(0) AOC03_05700 PF00137 ATP synthase subunit C AOC03_05705 PF00119 ATP synthase A chain AOC03_05725 PF00005 ABC transporter AOC03_05730 PF00950 ABC 3 transport family AOC03_05735 PF00149 Calcineurin-like phosphoesterase AOC03_05740 PF01258 Prokaryotic dksA/traR C4-type zinc finger AOC03_05745 PF00749 tRNA synthetases class I (E and Q), catalytic domain AOC03_05750 PF01098 Cell cycle protein AOC03_05755 PF08245 Mur ligase middle domain AOC03_05755 PF02875 Mur ligase family, glutamate ligase domain AOC03_05760 PF00916 Sulfate permease family AOC03_05760 PF01740 STAS domain AOC03_05770 PF00543 Nitrogen regulatory protein P-II AOC03_05785 PF01223 DNA/RNA non-specific endonuclease AOC03_05800 PF03466 LysR substrate binding domain AOC03_05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_05805 PF00484 Carbonic anhydrase AOC03_05810 PF02560 Cyanate lyase C-terminal domain AOC03_05815 PF07690 Major Facilitator Superfamily AOC03_05820 PF03928 Haem-degrading AOC03_05825 PF13091 PLD-like domain AOC03_05825 PF13396 Phospholipase_D-nuclease N-terminal AOC03_05830 PF13847 Methyltransferase domain AOC03_05835 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AOC03_05835 PF00953 Glycosyl transferase family 4 AOC03_05840 PF08245 Mur ligase middle domain AOC03_05840 PF02875 Mur ligase family, glutamate ligase domain AOC03_05840 PF01225 Mur ligase family, catalytic domain AOC03_05845 PF08245 Mur ligase middle domain AOC03_05845 PF02875 Mur ligase family, glutamate ligase domain AOC03_05845 PF01225 Mur ligase family, catalytic domain AOC03_05850 PF00905 Penicillin binding protein transpeptidase domain AOC03_05850 PF03717 Penicillin-binding Protein dimerisation domain AOC03_05860 PF01795 MraW methylase family AOC03_05865 PF00749 tRNA synthetases class I (E and Q), catalytic domain AOC03_05890 PF00892 EamA-like transporter family AOC03_05895 PF00694 Aconitase C-terminal domain AOC03_05895 PF00330 Aconitase family (aconitate hydratase) AOC03_05910 PF02810 SEC-C motif AOC03_05925 PF13230 Glutamine amidotransferases class-II AOC03_05940 PF00977 Histidine biosynthesis protein AOC03_05945 PF00885 6,7-dimethyl-8-ribityllumazine synthase AOC03_05955 PF02769 AIR synthase related protein, C-terminal domain AOC03_05955 PF00586 AIR synthase related protein, N-terminal domain AOC03_05960 PF04608 Phosphatidylglycerophosphatase A AOC03_05965 PF12804 MobA-like NTP transferase domain AOC03_05965 PF14602 Hexapeptide repeat of succinyl-transferase AOC03_05965 PF00132 Bacterial transferase hexapeptide (six repeats) AOC03_05970 PF01380 SIS domain AOC03_05980 PF00873 AcrB/AcrD/AcrF family AOC03_05985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AOC03_05985 PF00529 HlyD membrane-fusion protein of T1SS AOC03_05990 PF17191 RecG wedge domain AOC03_05990 PF00271 Helicase conserved C-terminal domain AOC03_05990 PF00270 DEAD/DEAH box helicase AOC03_05995 PF01734 Patatin-like phospholipase AOC03_06010 PF00696 Amino acid kinase family AOC03_06010 PF00583 Acetyltransferase (GNAT) family AOC03_06015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AOC03_06015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AOC03_06020 PF05552 Conserved TM helix AOC03_06035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_06035 PF01751 Toprim domain AOC03_06035 PF00986 DNA gyrase B subunit, carboxyl terminus AOC03_06035 PF00204 DNA gyrase B AOC03_06040 PF05728 Uncharacterised protein family (UPF0227) AOC03_06155 PF06082 Exopolysaccharide biosynthesis protein YbjH AOC03_06175 PF03129 Anticodon binding domain AOC03_06175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AOC03_06175 PF02824 TGS domain AOC03_06175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AOC03_06180 PF05198 Translation initiation factor IF-3, N-terminal domain AOC03_06180 PF00707 Translation initiation factor IF-3, C-terminal domain AOC03_06190 PF08461 Ribonuclease R winged-helix domain AOC03_06190 PF17876 Cold shock domain AOC03_06190 PF08206 Ribonuclease B OB domain AOC03_06190 PF00773 RNB domain AOC03_06190 PF00575 S1 RNA binding domain AOC03_06205 PF00977 Histidine biosynthesis protein AOC03_06210 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AOC03_06210 PF11973 NQRA C-terminal domain AOC03_06215 PF03116 NQR2, RnfD, RnfE family AOC03_06220 PF04205 FMN-binding domain AOC03_06225 PF02508 Rnf-Nqr subunit, membrane protein AOC03_06230 PF02508 Rnf-Nqr subunit, membrane protein AOC03_06235 PF00175 Oxidoreductase NAD-binding domain AOC03_06235 PF00970 Oxidoreductase FAD-binding domain AOC03_06235 PF00111 2Fe-2S iron-sulfur cluster binding domain AOC03_06240 PF02424 ApbE family AOC03_06250 PF07690 Major Facilitator Superfamily AOC03_06255 PF13472 GDSL-like Lipase/Acylhydrolase family AOC03_06260 PF12704 MacB-like periplasmic core domain AOC03_06260 PF02687 FtsX-like permease family AOC03_06260 PF00005 ABC transporter AOC03_06270 PF00155 Aminotransferase class I and II AOC03_06280 PF00117 Glutamine amidotransferase class-I AOC03_06285 PF00475 Imidazoleglycerol-phosphate dehydratase AOC03_06305 PF13419 Haloacid dehalogenase-like hydrolase AOC03_06310 PF13335 Magnesium chelatase, subunit ChlI C-terminal AOC03_06310 PF01078 Magnesium chelatase, subunit ChlI AOC03_06315 PF06969 HemN C-terminal domain AOC03_06315 PF04055 Radical SAM superfamily AOC03_06325 PF01145 SPFH domain / Band 7 family AOC03_06325 PF16200 C-terminal region of band_7 AOC03_06340 PF00155 Aminotransferase class I and II AOC03_06350 PF00012 Hsp70 protein AOC03_06355 PF01025 GrpE AOC03_06360 PF07859 alpha/beta hydrolase fold AOC03_06365 PF00149 Calcineurin-like phosphoesterase AOC03_06370 PF00149 Calcineurin-like phosphoesterase AOC03_06375 PF08338 Domain of unknown function (DUF1731) AOC03_06375 PF01370 NAD dependent epimerase/dehydratase family AOC03_06380 PF01300 Telomere recombination AOC03_06385 PF17782 DprA winged helix domain AOC03_06385 PF02481 DNA recombination-mediator protein A AOC03_06390 PF01476 LysM domain AOC03_06395 PF14821 Threonine synthase N terminus AOC03_06395 PF00291 Pyridoxal-phosphate dependent enzyme AOC03_06400 PF01029 NusB family AOC03_06400 PF01189 16S rRNA methyltransferase RsmB/F AOC03_06405 PF02911 Formyl transferase, C-terminal domain AOC03_06405 PF00551 Formyl transferase AOC03_06410 PF00512 His Kinase A (phospho-acceptor) domain AOC03_06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_06410 PF01627 Hpt domain AOC03_06410 PF00072 Response regulator receiver domain AOC03_06410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AOC03_06410 PF00672 HAMP domain AOC03_06415 PF00677 Lumazine binding domain AOC03_06420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AOC03_06420 PF01872 RibD C-terminal domain AOC03_06425 PF03477 ATP cone domain AOC03_06430 PF10396 GTP-binding protein TrmE N-terminus AOC03_06430 PF12631 MnmE helical domain AOC03_06430 PF01926 50S ribosome-binding GTPase AOC03_06435 PF02096 60Kd inner membrane protein AOC03_06435 PF14849 YidC periplasmic domain AOC03_06440 PF01809 Putative membrane protein insertion efficiency factor AOC03_06445 PF00825 Ribonuclease P AOC03_06450 PF00468 Ribosomal protein L34 AOC03_06455 PF11638 DnaA N-terminal domain AOC03_06455 PF08299 Bacterial dnaA protein helix-turn-helix AOC03_06455 PF00308 Bacterial dnaA protein AOC03_06460 PF02767 DNA polymerase III beta subunit, central domain AOC03_06460 PF00712 DNA polymerase III beta subunit, N-terminal domain AOC03_06460 PF02768 DNA polymerase III beta subunit, C-terminal domain AOC03_06465 PF02463 RecF/RecN/SMC N terminal domain AOC03_06470 PF18053 DNA gyrase B subunit insert domain AOC03_06470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_06470 PF00986 DNA gyrase B subunit, carboxyl terminus AOC03_06470 PF01751 Toprim domain AOC03_06470 PF00204 DNA gyrase B AOC03_06475 PF05971 RNA methyltransferase AOC03_06480 PF00378 Enoyl-CoA hydratase/isomerase AOC03_06485 PF02463 RecF/RecN/SMC N terminal domain AOC03_06495 PF00155 Aminotransferase class I and II AOC03_06500 PF00958 GMP synthase C terminal domain AOC03_06500 PF00117 Glutamine amidotransferase class-I AOC03_06500 PF02540 NAD synthase AOC03_06510 PF08240 Alcohol dehydrogenase GroES-like domain AOC03_06510 PF16197 Ketoacyl-synthetase C-terminal extension AOC03_06510 PF00109 Beta-ketoacyl synthase, N-terminal domain AOC03_06510 PF02801 Beta-ketoacyl synthase, C-terminal domain AOC03_06510 PF08659 KR domain AOC03_06510 PF00550 Phosphopantetheine attachment site AOC03_06510 PF14765 Polyketide synthase dehydratase AOC03_06510 PF00698 Acyl transferase domain AOC03_06530 PF01177 Asp/Glu/Hydantoin racemase AOC03_06535 PF01554 MatE AOC03_06540 PF00561 alpha/beta hydrolase fold AOC03_06555 PF00561 alpha/beta hydrolase fold AOC03_06560 PF09186 Domain of unknown function (DUF1949) AOC03_06560 PF01205 Uncharacterized protein family UPF0029 AOC03_06565 PF01479 S4 domain AOC03_06565 PF00849 RNA pseudouridylate synthase AOC03_06580 PF00684 DnaJ central domain AOC03_06580 PF00226 DnaJ domain AOC03_06580 PF01556 DnaJ C terminal domain AOC03_06585 PF01113 Dihydrodipicolinate reductase, N-terminus AOC03_06585 PF05173 Dihydrodipicolinate reductase, C-terminus AOC03_06595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AOC03_06595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AOC03_06600 PF01327 Polypeptide deformylase AOC03_06610 PF08245 Mur ligase middle domain AOC03_06610 PF01225 Mur ligase family, catalytic domain AOC03_06610 PF02875 Mur ligase family, glutamate ligase domain AOC03_06620 PF02600 Disulfide bond formation protein DsbB AOC03_06625 PF04262 Glutamate-cysteine ligase AOC03_06635 PF01521 Iron-sulphur cluster biosynthesis AOC03_06640 PF12848 ABC transporter AOC03_06640 PF00005 ABC transporter AOC03_06645 PF03330 Lytic transglycolase AOC03_06650 PF00226 DnaJ domain AOC03_06650 PF01556 DnaJ C terminal domain AOC03_06660 PF00375 Sodium:dicarboxylate symporter family AOC03_06670 PF02789 Cytosol aminopeptidase family, N-terminal domain AOC03_06670 PF00883 Cytosol aminopeptidase family, catalytic domain AOC03_06675 PF03739 Lipopolysaccharide export system permease LptF/LptG AOC03_06680 PF03739 Lipopolysaccharide export system permease LptF/LptG AOC03_06685 PF05175 Methyltransferase small domain AOC03_06695 PF00589 Phage integrase family AOC03_06695 PF02899 Phage integrase, N-terminal SAM-like domain AOC03_06700 PF05175 Methyltransferase small domain AOC03_06705 PF01206 Sulfurtransferase TusA AOC03_06715 PF03652 Holliday junction resolvase AOC03_06720 PF02622 Uncharacterized ACR, COG1678 AOC03_06725 PF02463 RecF/RecN/SMC N terminal domain AOC03_06730 PF06865 Pyrimidine/purine nucleoside phosphorylase AOC03_06735 PF00588 SpoU rRNA Methylase family AOC03_06735 PF08032 RNA 2'-O ribose methyltransferase substrate binding AOC03_06740 PF01121 Dephospho-CoA kinase AOC03_06745 PF06750 Bacterial Peptidase A24 N-terminal domain AOC03_06745 PF01478 Type IV leader peptidase family AOC03_06750 PF00482 Type II secretion system (T2SS), protein F AOC03_06755 PF00437 Type II/IV secretion system protein AOC03_06755 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AOC03_06760 PF00121 Triosephosphate isomerase AOC03_06765 PF03840 Preprotein translocase SecG subunit AOC03_06780 PF17384 RimP C-terminal SH3 domain AOC03_06780 PF02576 RimP N-terminal domain AOC03_06785 PF13184 NusA-like KH domain AOC03_06785 PF08529 NusA N-terminal domain AOC03_06790 PF04760 Translation initiation factor IF-2, N-terminal region AOC03_06790 PF11987 Translation-initiation factor 2 AOC03_06790 PF00009 Elongation factor Tu GTP binding domain AOC03_06790 PF08364 Bacterial translation initiation factor IF-2 associated region AOC03_06795 PF02033 Ribosome-binding factor A AOC03_06800 PF16198 tRNA pseudouridylate synthase B C-terminal domain AOC03_06800 PF01509 TruB family pseudouridylate synthase (N terminal domain) AOC03_06805 PF00312 Ribosomal protein S15 AOC03_06810 PF03725 3' exoribonuclease family, domain 2 AOC03_06810 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AOC03_06810 PF01138 3' exoribonuclease family, domain 1 AOC03_06810 PF00575 S1 RNA binding domain AOC03_06810 PF00013 KH domain AOC03_06825 PF01432 Peptidase family M3 AOC03_06835 PF03372 Endonuclease/Exonuclease/phosphatase family AOC03_06840 PF00107 Zinc-binding dehydrogenase AOC03_06840 PF08240 Alcohol dehydrogenase GroES-like domain AOC03_06860 PF00005 ABC transporter AOC03_06860 PF00664 ABC transporter transmembrane region AOC03_06870 PF00274 Fructose-bisphosphate aldolase class-I AOC03_06875 PF01964 Radical SAM ThiC family AOC03_06875 PF13667 ThiC-associated domain AOC03_06880 PF04362 Bacterial Fe(2+) trafficking AOC03_06885 PF14698 Argininosuccinate lyase C-terminal AOC03_06885 PF00206 Lyase AOC03_06890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_06890 PF07694 5TMR of 5TMR-LYT AOC03_06890 PF06580 Histidine kinase AOC03_06895 PF04397 LytTr DNA-binding domain AOC03_06895 PF00072 Response regulator receiver domain AOC03_06900 PF03900 Porphobilinogen deaminase, C-terminal domain AOC03_06900 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AOC03_06920 PF00925 GTP cyclohydrolase II AOC03_06920 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AOC03_06925 PF12002 MgsA AAA+ ATPase C terminal AOC03_06925 PF00004 ATPase family associated with various cellular activities (AAA) AOC03_06925 PF16193 AAA C-terminal domain AOC03_06940 PF00285 Citrate synthase, C-terminal domain AOC03_06945 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AOC03_06950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AOC03_06955 PF02910 Fumarate reductase flavoprotein C-term AOC03_06955 PF00890 FAD binding domain AOC03_06960 PF13085 2Fe-2S iron-sulfur cluster binding domain AOC03_06965 PF16870 2-oxoglutarate dehydrogenase C-terminal AOC03_06965 PF02779 Transketolase, pyrimidine binding domain AOC03_06965 PF16078 2-oxoglutarate dehydrogenase N-terminus AOC03_06965 PF00676 Dehydrogenase E1 component AOC03_06970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AOC03_06970 PF00364 Biotin-requiring enzyme AOC03_06970 PF02817 e3 binding domain AOC03_06975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AOC03_06975 PF07992 Pyridine nucleotide-disulphide oxidoreductase AOC03_06980 PF00549 CoA-ligase AOC03_06980 PF08442 ATP-grasp domain AOC03_06985 PF02629 CoA binding domain AOC03_06985 PF00549 CoA-ligase AOC03_06990 PF16363 GDP-mannose 4,6 dehydratase AOC03_06995 PF00483 Nucleotidyl transferase AOC03_07000 PF00342 Phosphoglucose isomerase AOC03_07005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AOC03_07005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AOC03_07005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AOC03_07010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AOC03_07010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AOC03_07010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AOC03_07010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AOC03_07015 PF03819 MazG nucleotide pyrophosphohydrolase domain AOC03_07020 PF10531 SLBB domain AOC03_07025 PF12627 Probable RNA and SrmB- binding site of polymerase A AOC03_07025 PF12626 Polymerase A arginine-rich C-terminus AOC03_07025 PF01743 Poly A polymerase head domain AOC03_07030 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AOC03_07035 PF02548 Ketopantoate hydroxymethyltransferase AOC03_07040 PF02569 Pantoate-beta-alanine ligase AOC03_07045 PF03668 P-loop ATPase protein family AOC03_07055 PF01323 DSBA-like thioredoxin domain AOC03_07065 PF13419 Haloacid dehalogenase-like hydrolase AOC03_07070 PF00106 short chain dehydrogenase AOC03_07075 PF01258 Prokaryotic dksA/traR C4-type zinc finger AOC03_07080 PF07683 Cobalamin synthesis protein cobW C-terminal domain AOC03_07080 PF02492 CobW/HypB/UreG, nucleotide-binding domain AOC03_07085 PF00486 Transcriptional regulatory protein, C terminal AOC03_07085 PF00072 Response regulator receiver domain AOC03_07090 PF16921 Tex protein YqgF-like domain AOC03_07090 PF09371 Tex-like protein N-terminal domain AOC03_07090 PF00575 S1 RNA binding domain AOC03_07090 PF17674 HHH domain AOC03_07100 PF03435 Saccharopine dehydrogenase NADP binding domain AOC03_07105 PF01329 Pterin 4 alpha carbinolamine dehydratase AOC03_07115 PF00487 Fatty acid desaturase AOC03_07125 PF12848 ABC transporter AOC03_07125 PF00005 ABC transporter AOC03_07130 PF01553 Acyltransferase AOC03_07135 PF04073 Aminoacyl-tRNA editing domain AOC03_07150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AOC03_07150 PF02770 Acyl-CoA dehydrogenase, middle domain AOC03_07150 PF12806 Acetyl-CoA dehydrogenase C-terminal like AOC03_07150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AOC03_07160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AOC03_07160 PF08501 Shikimate dehydrogenase substrate binding domain AOC03_07160 PF01488 Shikimate / quinate 5-dehydrogenase AOC03_07170 PF01063 Amino-transferase class IV AOC03_07185 PF17726 Dam-replacing HTH domain AOC03_07185 PF06044 Dam-replacing family AOC03_07190 PF02618 YceG-like family AOC03_07195 PF02223 Thymidylate kinase AOC03_07200 PF02080 TrkA-C domain AOC03_07200 PF03471 Transporter associated domain AOC03_07200 PF00999 Sodium/hydrogen exchanger family AOC03_07205 PF13180 PDZ domain AOC03_07205 PF17820 PDZ domain AOC03_07210 PF00701 Dihydrodipicolinate synthetase family AOC03_07220 PF01259 SAICAR synthetase AOC03_07225 PF00082 Subtilase family AOC03_07225 PF03797 Autotransporter beta-domain AOC03_07225 PF12951 Passenger-associated-transport-repeat AOC03_07235 PF02245 Methylpurine-DNA glycosylase (MPG) AOC03_07240 PF01784 NIF3 (NGG1p interacting factor 3) AOC03_07255 PF05532 CsbD-like AOC03_07260 PF01571 Aminomethyltransferase folate-binding domain AOC03_07265 PF03831 PhnA domain AOC03_07265 PF08274 PhnA Zinc-Ribbon AOC03_07270 PF00202 Aminotransferase class-III AOC03_07275 PF02541 Ppx/GppA phosphatase family AOC03_07280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AOC03_07285 PF09179 TilS substrate binding domain AOC03_07285 PF01171 PP-loop family AOC03_07290 PF03807 NADP oxidoreductase coenzyme F420-dependent AOC03_07290 PF14748 Pyrroline-5-carboxylate reductase dimerisation AOC03_07295 PF02325 YGGT family AOC03_07300 PF08543 Phosphomethylpyrimidine kinase AOC03_07320 PF02261 Aspartate decarboxylase AOC03_07325 PF01195 Peptidyl-tRNA hydrolase AOC03_07335 PF01386 Ribosomal L25p family AOC03_07335 PF14693 Ribosomal protein TL5, C-terminal domain AOC03_07340 PF14572 Phosphoribosyl synthetase-associated domain AOC03_07340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AOC03_07355 PF00288 GHMP kinases N terminal domain AOC03_07370 PF01488 Shikimate / quinate 5-dehydrogenase AOC03_07370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AOC03_07370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AOC03_07380 PF04143 Sulphur transport AOC03_07390 PF00501 AMP-binding enzyme AOC03_07390 PF13193 AMP-binding enzyme C-terminal domain AOC03_07395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AOC03_07395 PF07992 Pyridine nucleotide-disulphide oxidoreductase AOC03_07415 PF03099 Biotin/lipoate A/B protein ligase family AOC03_07415 PF10437 Bacterial lipoate protein ligase C-terminus AOC03_07420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AOC03_07425 PF05726 Pirin C-terminal cupin domain AOC03_07425 PF02678 Pirin AOC03_07435 PF13193 AMP-binding enzyme C-terminal domain AOC03_07435 PF00501 AMP-binding enzyme AOC03_07435 PF16177 Acetyl-coenzyme A synthetase N-terminus AOC03_07445 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AOC03_07445 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AOC03_07450 PF01066 CDP-alcohol phosphatidyltransferase AOC03_07470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AOC03_07470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AOC03_07470 PF02769 AIR synthase related protein, C-terminal domain AOC03_07490 PF00117 Glutamine amidotransferase class-I AOC03_07490 PF02540 NAD synthase AOC03_07490 PF00958 GMP synthase C terminal domain AOC03_07495 PF01494 FAD binding domain AOC03_07500 PF01510 N-acetylmuramoyl-L-alanine amidase AOC03_07505 PF03475 3-alpha domain AOC03_07505 PF03473 MOSC domain AOC03_07515 PF01467 Cytidylyltransferase-like AOC03_07520 PF01515 Phosphate acetyl/butaryl transferase AOC03_07520 PF07085 DRTGG domain AOC03_07525 PF00871 Acetokinase family AOC03_07535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AOC03_07535 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AOC03_07545 PF01678 Diaminopimelate epimerase AOC03_07550 PF00589 Phage integrase family AOC03_07550 PF02899 Phage integrase, N-terminal SAM-like domain AOC03_07555 PF00795 Carbon-nitrogen hydrolase AOC03_07560 PF04963 Sigma-54 factor, core binding domain AOC03_07560 PF00309 Sigma-54 factor, Activator interacting domain (AID) AOC03_07560 PF04552 Sigma-54, DNA binding domain AOC03_07565 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AOC03_07575 PF04241 Protein of unknown function (DUF423) AOC03_07580 PF04542 Sigma-70 region 2 AOC03_07580 PF04545 Sigma-70, region 4 AOC03_07580 PF00140 Sigma-70 factor, region 1.2 AOC03_07585 PF00581 Rhodanese-like domain AOC03_07585 PF01206 Sulfurtransferase TusA AOC03_07600 PF01165 Ribosomal protein S21 AOC03_07615 PF00814 Glycoprotease family AOC03_07620 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AOC03_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_07625 PF03466 LysR substrate binding domain AOC03_07630 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_07635 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_07640 PF00005 ABC transporter AOC03_07640 PF08402 TOBE domain AOC03_07645 PF00484 Carbonic anhydrase AOC03_07650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AOC03_07655 PF01322 Cytochrome C' AOC03_07660 PF01218 Coproporphyrinogen III oxidase AOC03_07665 PF00925 GTP cyclohydrolase II AOC03_07670 PF02779 Transketolase, pyrimidine binding domain AOC03_07670 PF02780 Transketolase, C-terminal domain AOC03_07670 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AOC03_07675 PF00459 Inositol monophosphatase family AOC03_07680 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AOC03_07680 PF06974 Protein of unknown function (DUF1298) AOC03_07685 PF05690 Thiazole biosynthesis protein ThiG AOC03_07690 PF00437 Type II/IV secretion system protein AOC03_07695 PF01042 Endoribonuclease L-PSP AOC03_07705 PF12102 Domain of unknown function (DUF3578) AOC03_07705 PF07728 AAA domain (dynein-related subfamily) AOC03_07740 PF00482 Type II secretion system (T2SS), protein F AOC03_07745 PF08334 Type II secretion system (T2SS), protein G AOC03_07745 PF07963 Prokaryotic N-terminal methylation motif AOC03_07750 PF11412 Disulphide bond corrector protein DsbC AOC03_07750 PF02683 Cytochrome C biogenesis protein transmembrane region AOC03_07755 PF11412 Disulphide bond corrector protein DsbC AOC03_07755 PF02683 Cytochrome C biogenesis protein transmembrane region AOC03_07765 PF02253 Phospholipase A1 AOC03_07805 PF07963 Prokaryotic N-terminal methylation motif AOC03_07805 PF00114 Pilin (bacterial filament) AOC03_07810 PF00114 Pilin (bacterial filament) AOC03_07810 PF07963 Prokaryotic N-terminal methylation motif AOC03_07820 PF00144 Beta-lactamase AOC03_07825 PF07963 Prokaryotic N-terminal methylation motif AOC03_07825 PF00114 Pilin (bacterial filament) AOC03_07830 PF11953 Domain of unknown function (DUF3470) AOC03_07830 PF00037 4Fe-4S binding domain AOC03_07835 PF00488 MutS domain V AOC03_07835 PF05190 MutS family domain IV AOC03_07835 PF05192 MutS domain III AOC03_07835 PF05188 MutS domain II AOC03_07835 PF01624 MutS domain I AOC03_07840 PF07516 SecA Wing and Scaffold domain AOC03_07840 PF02810 SEC-C motif AOC03_07840 PF07517 SecA DEAD-like domain AOC03_07840 PF01043 SecA preprotein cross-linking domain AOC03_07855 PF05239 PRC-barrel domain AOC03_07855 PF09557 Domain of unknown function (DUF2382) AOC03_07860 PF02803 Thiolase, C-terminal domain AOC03_07860 PF00108 Thiolase, N-terminal domain AOC03_07865 PF01842 ACT domain AOC03_07865 PF03447 Homoserine dehydrogenase, NAD binding domain AOC03_07865 PF00742 Homoserine dehydrogenase AOC03_07870 PF13098 Thioredoxin-like domain AOC03_07870 PF10411 Disulfide bond isomerase protein N-terminus AOC03_07875 PF05661 Protein of unknown function (DUF808) AOC03_07880 PF12111 Polyribonucleotide phosphorylase C terminal AOC03_07880 PF00575 S1 RNA binding domain AOC03_07880 PF10150 Ribonuclease E/G family AOC03_07885 PF00849 RNA pseudouridylate synthase AOC03_07885 PF01479 S4 domain AOC03_07895 PF01926 50S ribosome-binding GTPase AOC03_07900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AOC03_07905 PF00034 Cytochrome c AOC03_07920 PF04355 SmpA / OmlA family AOC03_07925 PF01475 Ferric uptake regulator family AOC03_07930 PF00437 Type II/IV secretion system protein AOC03_07935 PF00437 Type II/IV secretion system protein AOC03_07940 PF01168 Alanine racemase, N-terminal domain AOC03_07945 PF00571 CBS domain AOC03_07945 PF03471 Transporter associated domain AOC03_07945 PF01595 Cyclin M transmembrane N-terminal domain AOC03_07950 PF00795 Carbon-nitrogen hydrolase AOC03_07950 PF02540 NAD synthase AOC03_07955 PF01594 AI-2E family transporter AOC03_07960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AOC03_07960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AOC03_07960 PF11890 Domain of unknown function (DUF3410) AOC03_07965 PF00152 tRNA synthetases class II (D, K and N) AOC03_07970 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AOC03_07975 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AOC03_07975 PF02222 ATP-grasp domain AOC03_07980 PF00731 AIR carboxylase AOC03_08005 PF00933 Glycosyl hydrolase family 3 N terminal domain AOC03_08010 PF00595 PDZ domain AOC03_08010 PF03572 Peptidase family S41 AOC03_08010 PF11818 C-terminal domain of tail specific protease (DUF3340) AOC03_08010 PF17804 Tail specific protease N-terminal domain AOC03_08015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AOC03_08035 PF00849 RNA pseudouridylate synthase AOC03_08040 PF03971 Monomeric isocitrate dehydrogenase AOC03_08045 PF03971 Monomeric isocitrate dehydrogenase AOC03_08060 PF04345 Chorismate lyase AOC03_08065 PF00464 Serine hydroxymethyltransferase AOC03_08070 PF03616 Sodium/glutamate symporter AOC03_08075 PF00171 Aldehyde dehydrogenase family AOC03_08085 PF00005 ABC transporter AOC03_08090 PF00497 Bacterial extracellular solute-binding proteins, family 3 AOC03_08095 PF00497 Bacterial extracellular solute-binding proteins, family 3 AOC03_08100 PF00497 Bacterial extracellular solute-binding proteins, family 3 AOC03_08105 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_08110 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_08125 PF01557 Fumarylacetoacetate (FAA) hydrolase family AOC03_08145 PF01430 Hsp33 protein AOC03_08150 PF00497 Bacterial extracellular solute-binding proteins, family 3 AOC03_08155 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_08160 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_08165 PF00005 ABC transporter AOC03_08170 PF18113 Rubredoxin binding C-terminal domain AOC03_08170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AOC03_08175 PF03309 Type III pantothenate kinase AOC03_08185 PF01925 Sulfite exporter TauE/SafE AOC03_08190 PF02463 RecF/RecN/SMC N terminal domain AOC03_08190 PF06470 SMC proteins Flexible Hinge Domain AOC03_08195 PF04354 ZipA, C-terminal FtsZ-binding domain AOC03_08200 PF03120 NAD-dependent DNA ligase OB-fold domain AOC03_08200 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AOC03_08200 PF00533 BRCA1 C Terminus (BRCT) domain AOC03_08200 PF12826 Helix-hairpin-helix motif AOC03_08200 PF01653 NAD-dependent DNA ligase adenylation domain AOC03_08220 PF04055 Radical SAM superfamily AOC03_08220 PF11842 Domain of unknown function (DUF3362) AOC03_08220 PF08497 Radical SAM N-terminal AOC03_08230 PF01037 Lrp/AsnC ligand binding domain AOC03_08235 PF00892 EamA-like transporter family AOC03_08240 PF01668 SmpB protein AOC03_08245 PF01467 Cytidylyltransferase-like AOC03_08250 PF00037 4Fe-4S binding domain AOC03_08255 PF06968 Biotin and Thiamin Synthesis associated domain AOC03_08255 PF00202 Aminotransferase class-III AOC03_08255 PF04055 Radical SAM superfamily AOC03_08270 PF06421 GTP-binding protein LepA C-terminus AOC03_08270 PF00009 Elongation factor Tu GTP binding domain AOC03_08270 PF03144 Elongation factor Tu domain 2 AOC03_08270 PF00679 Elongation factor G C-terminus AOC03_08275 PF10502 Signal peptidase, peptidase S26 AOC03_08285 PF00035 Double-stranded RNA binding motif AOC03_08285 PF14622 Ribonuclease-III-like AOC03_08290 PF07650 KH domain AOC03_08290 PF01926 50S ribosome-binding GTPase AOC03_08295 PF11967 Recombination protein O N terminal AOC03_08295 PF02565 Recombination protein O C terminal AOC03_08300 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AOC03_08310 PF13505 Outer membrane protein beta-barrel domain AOC03_08310 PF00691 OmpA family AOC03_08320 PF01741 Large-conductance mechanosensitive channel, MscL AOC03_08330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AOC03_08330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AOC03_08330 PF06827 Zinc finger found in FPG and IleRS AOC03_08335 PF04607 Region found in RelA / SpoT proteins AOC03_08335 PF13291 ACT domain AOC03_08335 PF02824 TGS domain AOC03_08340 PF05958 tRNA (Uracil-5-)-methyltransferase AOC03_08350 PF00291 Pyridoxal-phosphate dependent enzyme AOC03_08360 PF00378 Enoyl-CoA hydratase/isomerase AOC03_08365 PF07690 Major Facilitator Superfamily AOC03_08370 PF01584 CheW-like domain AOC03_08370 PF02895 Signal transducing histidine kinase, homodimeric domain AOC03_08370 PF09078 CheY binding AOC03_08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_08370 PF01627 Hpt domain AOC03_08375 PF00072 Response regulator receiver domain AOC03_08390 PF00318 Ribosomal protein S2 AOC03_08395 PF00889 Elongation factor TS AOC03_08400 PF01464 Transglycosylase SLT domain AOC03_08400 PF10145 Phage-related minor tail protein AOC03_08400 PF01551 Peptidase family M23 AOC03_08415 PF16360 GTP-binding GTPase Middle Region AOC03_08415 PF01926 50S ribosome-binding GTPase AOC03_08415 PF13167 GTP-binding GTPase N-terminal AOC03_08425 PF00248 Aldo/keto reductase family AOC03_08430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AOC03_08435 PF00313 'Cold-shock' DNA-binding domain AOC03_08440 PF01252 Signal peptidase (SPase) II AOC03_08445 PF08264 Anticodon-binding domain of tRNA AOC03_08445 PF06827 Zinc finger found in FPG and IleRS AOC03_08445 PF00133 tRNA synthetases class I (I, L, M and V) AOC03_08450 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AOC03_08450 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AOC03_08455 PF00578 AhpC/TSA family AOC03_08460 PF00583 Acetyltransferase (GNAT) family AOC03_08460 PF00795 Carbon-nitrogen hydrolase AOC03_08470 PF02913 FAD linked oxidases, C-terminal domain AOC03_08470 PF01565 FAD binding domain AOC03_08475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AOC03_08475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AOC03_08480 PF00576 HIUase/Transthyretin family AOC03_08495 PF00561 alpha/beta hydrolase fold AOC03_08495 PF07021 Methionine biosynthesis protein MetW AOC03_08500 PF00561 alpha/beta hydrolase fold AOC03_08505 PF00762 Ferrochelatase AOC03_08520 PF01612 3'-5' exonuclease AOC03_08520 PF00476 DNA polymerase family A AOC03_08520 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AOC03_08520 PF01367 5'-3' exonuclease, C-terminal SAM fold AOC03_08525 PF02566 OsmC-like protein AOC03_08535 PF00009 Elongation factor Tu GTP binding domain AOC03_08535 PF03144 Elongation factor Tu domain 2 AOC03_08535 PF16658 Class II release factor RF3, C-terminal domain AOC03_08550 PF04715 Anthranilate synthase component I, N terminal region AOC03_08550 PF00425 chorismate binding enzyme AOC03_08575 PF00009 Elongation factor Tu GTP binding domain AOC03_08575 PF03143 Elongation factor Tu C-terminal domain AOC03_08575 PF03144 Elongation factor Tu domain 2 AOC03_08580 PF00583 Acetyltransferase (GNAT) family AOC03_08585 PF13411 MerR HTH family regulatory protein AOC03_08590 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AOC03_08595 PF07992 Pyridine nucleotide-disulphide oxidoreductase AOC03_08600 PF17854 FtsK alpha domain AOC03_08600 PF01580 FtsK/SpoIIIE family AOC03_08600 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AOC03_08600 PF09397 Ftsk gamma domain AOC03_08605 PF01425 Amidase AOC03_08610 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AOC03_08615 PF02590 Predicted SPOUT methyltransferase AOC03_08650 PF00155 Aminotransferase class I and II AOC03_08660 PF08335 GlnD PII-uridylyltransferase AOC03_08660 PF01966 HD domain AOC03_08665 PF00557 Metallopeptidase family M24 AOC03_08690 PF02574 Homocysteine S-methyltransferase AOC03_08690 PF02965 Vitamin B12 dependent methionine synthase, activation domain AOC03_08690 PF02310 B12 binding domain AOC03_08690 PF02607 B12 binding domain AOC03_08690 PF00809 Pterin binding enzyme AOC03_08695 PF02469 Fasciclin domain AOC03_08700 PF02469 Fasciclin domain AOC03_08705 PF01235 Sodium:alanine symporter family AOC03_08725 PF02146 Sir2 family AOC03_08745 PF02384 N-6 DNA Methylase AOC03_08810 PF13356 Arm DNA-binding domain AOC03_08810 PF00589 Phage integrase family AOC03_08820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AOC03_08825 PF00005 ABC transporter AOC03_08830 PF01061 ABC-2 type transporter AOC03_08835 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AOC03_08835 PF14489 QueF-like protein AOC03_08845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AOC03_08845 PF04073 Aminoacyl-tRNA editing domain AOC03_08845 PF03129 Anticodon binding domain AOC03_08870 PF05360 yiaA/B two helix domain AOC03_08875 PF01266 FAD dependent oxidoreductase AOC03_08875 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AOC03_08885 PF03795 YCII-related domain AOC03_08890 PF04279 Intracellular septation protein A AOC03_08895 PF02811 PHP domain AOC03_08900 PF00990 Diguanylate cyclase, GGDEF domain AOC03_08905 PF01142 tRNA pseudouridine synthase D (TruD) AOC03_08910 PF14759 Reductase C-terminal AOC03_08910 PF07992 Pyridine nucleotide-disulphide oxidoreductase AOC03_08935 PF00005 ABC transporter AOC03_08935 PF17755 UvrA DNA-binding domain AOC03_08935 PF17760 UvrA interaction domain AOC03_08940 PF07690 Major Facilitator Superfamily AOC03_08945 PF00436 Single-strand binding protein family AOC03_08950 PF00816 H-NS histone family AOC03_08965 PF03958 Bacterial type II/III secretion system short domain AOC03_08965 PF00263 Bacterial type II and III secretion system protein AOC03_08980 PF01026 TatD related DNase AOC03_08985 PF00899 ThiF family AOC03_08990 PF00072 Response regulator receiver domain AOC03_08990 PF00512 His Kinase A (phospho-acceptor) domain AOC03_08990 PF09308 LuxQ, periplasmic AOC03_08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_08995 PF01132 Elongation factor P (EF-P) OB domain AOC03_08995 PF08207 Elongation factor P (EF-P) KOW-like domain AOC03_08995 PF09285 Elongation factor P, C-terminal AOC03_09000 PF04055 Radical SAM superfamily AOC03_09010 PF00990 Diguanylate cyclase, GGDEF domain AOC03_09010 PF07694 5TMR of 5TMR-LYT AOC03_09020 PF07726 ATPase family associated with various cellular activities (AAA) AOC03_09020 PF17863 AAA lid domain AOC03_09030 PF13559 Domain of unknown function (DUF4129) AOC03_09030 PF11992 Domain of unknown function (DUF3488) AOC03_09030 PF01841 Transglutaminase-like superfamily AOC03_09055 PF03594 Benzoate membrane transport protein AOC03_09060 PF12833 Helix-turn-helix domain AOC03_09090 PF13276 HTH-like domain AOC03_09090 PF00665 Integrase core domain AOC03_09090 PF13333 Integrase core domain AOC03_09095 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AOC03_09100 PF01177 Asp/Glu/Hydantoin racemase AOC03_09115 PF01925 Sulfite exporter TauE/SafE AOC03_09120 PF01613 Flavin reductase like domain AOC03_09125 PF01717 Cobalamin-independent synthase, Catalytic domain AOC03_09125 PF08267 Cobalamin-independent synthase, N-terminal domain AOC03_09150 PF01569 PAP2 superfamily AOC03_09170 PF00291 Pyridoxal-phosphate dependent enzyme AOC03_09175 PF01062 Bestrophin, RFP-TM, chloride channel AOC03_09190 PF00486 Transcriptional regulatory protein, C terminal AOC03_09190 PF00072 Response regulator receiver domain AOC03_09195 PF08521 Two-component sensor kinase N-terminal AOC03_09195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_09195 PF00512 His Kinase A (phospho-acceptor) domain AOC03_09200 PF06628 Catalase-related immune-responsive AOC03_09200 PF00199 Catalase AOC03_09205 PF02386 Cation transport protein AOC03_09210 PF02080 TrkA-C domain AOC03_09210 PF02254 TrkA-N domain AOC03_09220 PF08238 Sel1 repeat AOC03_09235 PF03466 LysR substrate binding domain AOC03_09235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_09240 PF05726 Pirin C-terminal cupin domain AOC03_09240 PF02678 Pirin AOC03_09245 PF13409 Glutathione S-transferase, N-terminal domain AOC03_09275 PF13649 Methyltransferase domain AOC03_09300 PF12147 Putative methyltransferase AOC03_09300 PF12146 Serine aminopeptidase, S33 AOC03_09305 PF00994 Probable molybdopterin binding domain AOC03_09305 PF03453 MoeA N-terminal region (domain I and II) AOC03_09305 PF03454 MoeA C-terminal region (domain IV) AOC03_09310 PF06463 Molybdenum Cofactor Synthesis C AOC03_09310 PF04055 Radical SAM superfamily AOC03_09315 PF00994 Probable molybdopterin binding domain AOC03_09320 PF12804 MobA-like NTP transferase domain AOC03_09325 PF01967 MoaC family AOC03_09335 PF02391 MoaE protein AOC03_09345 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_09355 PF02659 Putative manganese efflux pump AOC03_09360 PF08240 Alcohol dehydrogenase GroES-like domain AOC03_09360 PF00107 Zinc-binding dehydrogenase AOC03_09370 PF14552 Tautomerase enzyme AOC03_09375 PF13302 Acetyltransferase (GNAT) domain AOC03_09395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AOC03_09395 PF08447 PAS fold AOC03_09405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AOC03_09405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AOC03_09410 PF00497 Bacterial extracellular solute-binding proteins, family 3 AOC03_09415 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_09420 PF00005 ABC transporter AOC03_09425 PF07883 Cupin domain AOC03_09425 PF05899 Protein of unknown function (DUF861) AOC03_09430 PF04115 Ureidoglycolate lyase AOC03_09440 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AOC03_09450 PF00576 HIUase/Transthyretin family AOC03_09465 PF00593 TonB dependent receptor AOC03_09465 PF07715 TonB-dependent Receptor Plug Domain AOC03_09475 PF00005 ABC transporter AOC03_09480 PF01032 FecCD transport family AOC03_09485 PF01032 FecCD transport family AOC03_09490 PF01497 Periplasmic binding protein AOC03_09500 PF01618 MotA/TolQ/ExbB proton channel family AOC03_09505 PF02472 Biopolymer transport protein ExbD/TolR AOC03_09520 PF08272 Topoisomerase I zinc-ribbon-like AOC03_09520 PF01131 DNA topoisomerase AOC03_09520 PF01751 Toprim domain AOC03_09520 PF01396 Topoisomerase DNA binding C4 zinc finger AOC03_09525 PF00080 Copper/zinc superoxide dismutase (SODC) AOC03_09540 PF02190 ATP-dependent protease La (LON) substrate-binding domain AOC03_09540 PF05362 Lon protease (S16) C-terminal proteolytic domain AOC03_09540 PF00004 ATPase family associated with various cellular activities (AAA) AOC03_09545 PF03553 Na+/H+ antiporter family AOC03_09545 PF13726 Na+-H+ antiporter family AOC03_09555 PF01812 5-formyltetrahydrofolate cyclo-ligase family AOC03_09560 PF10415 Fumarase C C-terminus AOC03_09560 PF00206 Lyase AOC03_09570 PF06629 MltA-interacting protein MipA AOC03_09575 PF01694 Rhomboid family AOC03_09580 PF01070 FMN-dependent dehydrogenase AOC03_09590 PF00912 Transglycosylase AOC03_09595 PF13089 Polyphosphate kinase N-terminal domain AOC03_09595 PF17941 Polyphosphate kinase C-terminal domain 1 AOC03_09595 PF13090 Polyphosphate kinase C-terminal domain 2 AOC03_09595 PF02503 Polyphosphate kinase middle domain AOC03_09610 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AOC03_09615 PF01274 Malate synthase AOC03_09635 PF00117 Glutamine amidotransferase class-I AOC03_09635 PF06418 CTP synthase N-terminus AOC03_09640 PF00793 DAHP synthetase I family AOC03_09655 PF00403 Heavy-metal-associated domain AOC03_09660 PF03952 Enolase, N-terminal domain AOC03_09660 PF00113 Enolase, C-terminal TIM barrel domain AOC03_09665 PF04977 Septum formation initiator AOC03_09670 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AOC03_09685 PF00929 Exonuclease AOC03_09690 PF01979 Amidohydrolase family AOC03_09695 PF00764 Arginosuccinate synthase AOC03_09715 PF00463 Isocitrate lyase family AOC03_09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_09720 PF03466 LysR substrate binding domain AOC03_09725 PF00551 Formyl transferase AOC03_09730 PF00586 AIR synthase related protein, N-terminal domain AOC03_09730 PF02769 AIR synthase related protein, C-terminal domain AOC03_09735 PF01594 AI-2E family transporter AOC03_09750 PF00210 Ferritin-like domain AOC03_09760 PF02403 Seryl-tRNA synthetase N-terminal domain AOC03_09760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AOC03_09765 PF02779 Transketolase, pyrimidine binding domain AOC03_09765 PF00456 Transketolase, thiamine diphosphate binding domain AOC03_09765 PF02780 Transketolase, C-terminal domain AOC03_09775 PF04264 YceI-like domain AOC03_09780 PF08378 Nuclease-related domain AOC03_09790 PF00107 Zinc-binding dehydrogenase AOC03_09790 PF08240 Alcohol dehydrogenase GroES-like domain AOC03_09795 PF00171 Aldehyde dehydrogenase family AOC03_09800 PF14493 Helix-turn-helix domain AOC03_09800 PF05970 PIF1-like helicase AOC03_09945 PF04984 Phage tail sheath protein subtilisin-like domain AOC03_09945 PF17482 Phage tail sheath C-terminal domain AOC03_09950 PF16363 GDP-mannose 4,6 dehydratase AOC03_10080 PF15975 Flotillin AOC03_10080 PF01145 SPFH domain / Band 7 family AOC03_10085 PF07290 Protein of unknown function (DUF1449) AOC03_10130 PF03061 Thioesterase superfamily AOC03_10140 PF00210 Ferritin-like domain AOC03_10150 PF17757 UvrB interaction domain AOC03_10150 PF00271 Helicase conserved C-terminal domain AOC03_10150 PF12344 Ultra-violet resistance protein B AOC03_10150 PF02151 UvrB/uvrC motif AOC03_10150 PF04851 Type III restriction enzyme, res subunit AOC03_10180 PF02272 DHHA1 domain AOC03_10180 PF01368 DHH family AOC03_10180 PF17768 RecJ OB domain AOC03_10185 PF03458 UPF0126 domain AOC03_10195 PF04055 Radical SAM superfamily AOC03_10200 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AOC03_10200 PF14602 Hexapeptide repeat of succinyl-transferase AOC03_10210 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AOC03_10210 PF04055 Radical SAM superfamily AOC03_10215 PF06434 Aconitate hydratase 2 N-terminus AOC03_10215 PF00330 Aconitase family (aconitate hydratase) AOC03_10215 PF11791 Aconitate B N-terminal domain AOC03_10220 PF05656 Protein of unknown function (DUF805) AOC03_10230 PF00378 Enoyl-CoA hydratase/isomerase AOC03_10235 PF12697 Alpha/beta hydrolase family AOC03_10245 PF11202 Phosphoribosyl transferase (PRTase) AOC03_10245 PF15608 PELOTA RNA binding domain AOC03_10260 PF01042 Endoribonuclease L-PSP AOC03_10275 PF02342 TerD domain AOC03_10280 PF06580 Histidine kinase AOC03_10280 PF13492 GAF domain AOC03_10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AOC03_10280 PF07694 5TMR of 5TMR-LYT AOC03_10285 PF04397 LytTr DNA-binding domain AOC03_10285 PF00072 Response regulator receiver domain AOC03_10290 PF03606 C4-dicarboxylate anaerobic carrier AOC03_10295 PF02342 TerD domain AOC03_10305 PF02342 TerD domain AOC03_10315 PF02342 TerD domain AOC03_10320 PF01170 Putative RNA methylase family UPF0020 AOC03_10320 PF02926 THUMP domain AOC03_10320 PF10672 S-adenosylmethionine-dependent methyltransferase AOC03_10325 PF05552 Conserved TM helix AOC03_10325 PF00924 Mechanosensitive ion channel AOC03_10330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AOC03_10330 PF07992 Pyridine nucleotide-disulphide oxidoreductase AOC03_10335 PF00578 AhpC/TSA family AOC03_10345 PF06508 Queuosine biosynthesis protein QueC AOC03_10350 PF01171 PP-loop family AOC03_10360 PF12801 4Fe-4S binding domain AOC03_10360 PF13746 4Fe-4S dicluster domain AOC03_10360 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AOC03_10365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AOC03_10365 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AOC03_10380 PF00115 Cytochrome C and Quinol oxidase polypeptide I AOC03_10395 PF02687 FtsX-like permease family AOC03_10395 PF12704 MacB-like periplasmic core domain AOC03_10400 PF00005 ABC transporter AOC03_10410 PF00753 Metallo-beta-lactamase superfamily AOC03_10410 PF03772 Competence protein AOC03_10415 PF06965 Na+/H+ antiporter 1 AOC03_10415 PF01343 Peptidase family S49 AOC03_10425 PF02517 CPBP intramembrane metalloprotease AOC03_10430 PF01207 Dihydrouridine synthase (Dus) AOC03_10435 PF07690 Major Facilitator Superfamily AOC03_10440 PF13091 PLD-like domain AOC03_10445 PF01053 Cys/Met metabolism PLP-dependent enzyme AOC03_10450 PF02575 YbaB/EbfC DNA-binding family AOC03_10455 PF02132 RecR protein AOC03_10455 PF13662 Toprim domain AOC03_10460 PF01612 3'-5' exonuclease AOC03_10460 PF00570 HRDC domain AOC03_10465 PF00561 alpha/beta hydrolase fold AOC03_10470 PF02347 Glycine cleavage system P-protein AOC03_10470 PF00266 Aminotransferase class-V AOC03_10475 PF00881 Nitroreductase family AOC03_10480 PF01597 Glycine cleavage H-protein AOC03_10485 PF01571 Aminomethyltransferase folate-binding domain AOC03_10485 PF08669 Glycine cleavage T-protein C-terminal barrel domain AOC03_10490 PF05166 YcgL domain AOC03_10525 PF13396 Phospholipase_D-nuclease N-terminal AOC03_10525 PF13091 PLD-like domain AOC03_10535 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AOC03_10540 PF04452 RNA methyltransferase AOC03_10550 PF00528 Binding-protein-dependent transport system inner membrane component AOC03_10555 PF08402 TOBE domain AOC03_10555 PF00005 ABC transporter AOC03_10575 PF00521 DNA gyrase/topoisomerase IV, subunit A AOC03_10575 PF03989 DNA gyrase C-terminal domain, beta-propeller AOC03_10580 PF00892 EamA-like transporter family AOC03_10595 PF00753 Metallo-beta-lactamase superfamily AOC03_10605 PF03793 PASTA domain AOC03_10605 PF00069 Protein kinase domain AOC03_10630 PF04055 Radical SAM superfamily AOC03_10630 PF18693 TRAM domain AOC03_10630 PF00919 Uncharacterized protein family UPF0004 AOC03_10635 PF00696 Amino acid kinase family AOC03_10640 PF01765 Ribosome recycling factor AOC03_10645 PF01255 Putative undecaprenyl diphosphate synthase AOC03_10655 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AOC03_10655 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AOC03_10655 PF13288 DXP reductoisomerase C-terminal domain AOC03_10660 PF13180 PDZ domain AOC03_10660 PF02163 Peptidase family M50 AOC03_10660 PF17820 PDZ domain AOC03_10665 PF01103 Surface antigen AOC03_10665 PF07244 Surface antigen variable number repeat AOC03_10670 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AOC03_10670 PF00132 Bacterial transferase hexapeptide (six repeats) AOC03_10670 PF14602 Hexapeptide repeat of succinyl-transferase AOC03_10675 PF07977 FabA-like domain AOC03_10680 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AOC03_10680 PF00132 Bacterial transferase hexapeptide (six repeats) AOC03_10685 PF00209 Sodium:neurotransmitter symporter family AOC03_10690 PF01702 Queuine tRNA-ribosyltransferase AOC03_10700 PF02774 Semialdehyde dehydrogenase, dimerisation domain AOC03_10700 PF01118 Semialdehyde dehydrogenase, NAD binding domain AOC03_10710 PF00639 PPIC-type PPIASE domain AOC03_10710 PF09312 SurA N-terminal domain AOC03_10715 PF04453 LPS transport system D AOC03_10715 PF03968 OstA-like protein AOC03_10720 PF01636 Phosphotransferase enzyme family AOC03_10725 PF00483 Nucleotidyl transferase AOC03_10730 PF02322 Cytochrome bd terminal oxidase subunit II AOC03_10735 PF01654 Cytochrome bd terminal oxidase subunit I AOC03_10750 PF03232 Ubiquinone biosynthesis protein COQ7 AOC03_10760 PF17243 POTRA domain TamA domain 1 AOC03_10760 PF07244 Surface antigen variable number repeat AOC03_10760 PF01103 Surface antigen AOC03_10765 PF04357 TamB, inner membrane protein subunit of TAM complex AOC03_10775 PF08212 Lipocalin-like domain AOC03_10780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AOC03_10780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AOC03_10785 PF01018 GTP1/OBG AOC03_10785 PF01926 50S ribosome-binding GTPase AOC03_10790 PF01472 PUA domain AOC03_10790 PF00696 Amino acid kinase family AOC03_10795 PF01208 Uroporphyrinogen decarboxylase (URO-D) AOC03_10800 PF02774 Semialdehyde dehydrogenase, dimerisation domain AOC03_10800 PF01118 Semialdehyde dehydrogenase, NAD binding domain AOC03_10810 PF02617 ATP-dependent Clp protease adaptor protein ClpS AOC03_10815 PF07724 AAA domain (Cdc48 subfamily) AOC03_10815 PF17871 AAA lid domain AOC03_10815 PF02861 Clp amino terminal domain, pathogenicity island component AOC03_10815 PF00004 ATPase family associated with various cellular activities (AAA) AOC03_10815 PF10431 C-terminal, D2-small domain, of ClpB protein AOC03_10820 PF03167 Uracil DNA glycosylase superfamily AOC03_10825 PF14437 MafB19-like deaminase AOC03_10830 PF02224 Cytidylate kinase AOC03_10835 PF00575 S1 RNA binding domain AOC03_10840 PF00216 Bacterial DNA-binding protein AOC03_10850 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AOC03_10865 PF01649 Ribosomal protein S20 AOC03_10870 PF13460 NAD(P)H-binding AOC03_10875 PF03737 Aldolase/RraA AOC03_10880 PF00270 DEAD/DEAH box helicase AOC03_10880 PF02559 CarD-like/TRCF domain AOC03_10880 PF03461 TRCF domain AOC03_10880 PF17757 UvrB interaction domain AOC03_10880 PF00271 Helicase conserved C-terminal domain AOC03_10890 PF00211 Adenylate and Guanylate cyclase catalytic domain AOC03_10895 PF00111 2Fe-2S iron-sulfur cluster binding domain AOC03_10900 PF00012 Hsp70 protein AOC03_10905 PF00226 DnaJ domain AOC03_10905 PF07743 HSCB C-terminal oligomerisation domain AOC03_10910 PF01521 Iron-sulphur cluster biosynthesis AOC03_10915 PF01592 NifU-like N terminal domain AOC03_10920 PF00266 Aminotransferase class-V AOC03_10925 PF02082 Transcriptional regulator AOC03_10935 PF00216 Bacterial DNA-binding protein AOC03_10940 PF00639 PPIC-type PPIASE domain AOC03_10940 PF09312 SurA N-terminal domain AOC03_10945 PF01808 AICARFT/IMPCHase bienzyme AOC03_10945 PF02142 MGS-like domain AOC03_10950 PF02954 Bacterial regulatory protein, Fis family AOC03_10970 PF14814 Bifunctional transglycosylase second domain AOC03_10970 PF00905 Penicillin binding protein transpeptidase domain AOC03_10970 PF00912 Transglycosylase AOC03_10985 PF01513 ATP-NAD kinase AOC03_10990 PF07023 Protein of unknown function (DUF1315) AOC03_11000 PF02599 Global regulator protein family AOC03_11005 PF01842 ACT domain AOC03_11005 PF13840 ACT domain AOC03_11005 PF00696 Amino acid kinase family AOC03_11010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AOC03_11010 PF01411 tRNA synthetases class II (A) AOC03_11010 PF02272 DHHA1 domain AOC03_11030 PF05175 Methyltransferase small domain AOC03_11035 PF01264 Chorismate synthase AOC03_11045 PF13340 Putative transposase of IS4/5 family (DUF4096) AOC03_11065 PF12951 Passenger-associated-transport-repeat AOC03_11065 PF00082 Subtilase family AOC03_11065 PF03797 Autotransporter beta-domain AOC03_11080 PF03948 Ribosomal protein L9, C-terminal domain AOC03_11080 PF01281 Ribosomal protein L9, N-terminal domain AOC03_11085 PF01084 Ribosomal protein S18 AOC03_11090 PF01250 Ribosomal protein S6 AOC03_11100 PF00391 PEP-utilising enzyme, mobile domain AOC03_11100 PF02896 PEP-utilising enzyme, TIM barrel domain AOC03_11100 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AOC03_11105 PF03618 Kinase/pyrophosphorylase AOC03_11110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AOC03_11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase AOC03_11125 PF13533 Biotin-lipoyl like AOC03_11135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AOC03_11135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AOC03_11185 PF17831 Pyruvate dehydrogenase E1 component middle domain AOC03_11185 PF00456 Transketolase, thiamine diphosphate binding domain AOC03_11190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AOC03_11190 PF02817 e3 binding domain AOC03_11190 PF00364 Biotin-requiring enzyme AOC03_11195 PF03922 OmpW family AOC03_11205 PF00027 Cyclic nucleotide-binding domain AOC03_11205 PF00520 Ion transport protein AOC03_11220 PF13654 AAA domain AOC03_11220 PF05362 Lon protease (S16) C-terminal proteolytic domain AOC03_11225 PF02527 rRNA small subunit methyltransferase G AOC03_11230 PF13614 AAA domain AOC03_11235 PF17762 HTH domain found in ParB protein AOC03_11235 PF02195 ParB-like nuclease domain AOC03_11240 PF00664 ABC transporter transmembrane region AOC03_11240 PF00005 ABC transporter AOC03_11245 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AOC03_11250 PF02348 Cytidylyltransferase AOC03_11255 PF09115 DNA polymerase III, delta subunit, C terminal AOC03_11265 PF02803 Thiolase, C-terminal domain AOC03_11265 PF00108 Thiolase, N-terminal domain AOC03_11290 PF02277 Phosphoribosyltransferase AOC03_11295 PF02654 Cobalamin-5-phosphate synthase AOC03_11305 PF00893 Small Multidrug Resistance protein AOC03_11310 PF01266 FAD dependent oxidoreductase AOC03_11320 PF00999 Sodium/hydrogen exchanger family AOC03_11320 PF03471 Transporter associated domain AOC03_11320 PF02080 TrkA-C domain AOC03_11325 PF03466 LysR substrate binding domain AOC03_11325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_11330 PF00202 Aminotransferase class-III AOC03_11335 PF07063 Domain of unknown function (DUF1338) AOC03_11340 PF00171 Aldehyde dehydrogenase family AOC03_11350 PF01266 FAD dependent oxidoreductase AOC03_11355 PF02913 FAD linked oxidases, C-terminal domain AOC03_11355 PF01565 FAD binding domain AOC03_11360 PF02595 Glycerate kinase family AOC03_11365 PF00155 Aminotransferase class I and II AOC03_11370 PF07690 Major Facilitator Superfamily AOC03_11375 PF00472 RF-1 domain AOC03_11445 PF07728 AAA domain (dynein-related subfamily) AOC03_11445 PF12102 Domain of unknown function (DUF3578) AOC03_11455 PF10544 T5orf172 domain AOC03_11490 PF00176 SNF2 family N-terminal domain AOC03_11490 PF00271 Helicase conserved C-terminal domain AOC03_11490 PF12419 SNF2 Helicase protein AOC03_11530 PF02423 Ornithine cyclodeaminase/mu-crystallin family AOC03_11540 PF00291 Pyridoxal-phosphate dependent enzyme AOC03_11545 PF00266 Aminotransferase class-V AOC03_11550 PF00696 Amino acid kinase family AOC03_11565 PF00561 alpha/beta hydrolase fold AOC03_11570 PF00355 Rieske [2Fe-2S] domain AOC03_11575 PF14759 Reductase C-terminal AOC03_11575 PF07992 Pyridine nucleotide-disulphide oxidoreductase AOC03_11585 PF01557 Fumarylacetoacetate (FAA) hydrolase family AOC03_11590 PF01118 Semialdehyde dehydrogenase, NAD binding domain AOC03_11590 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AOC03_11595 PF00682 HMGL-like AOC03_11595 PF07836 DmpG-like communication domain AOC03_11600 PF03060 Nitronate monooxygenase AOC03_11605 PF13193 AMP-binding enzyme C-terminal domain AOC03_11605 PF00501 AMP-binding enzyme AOC03_11610 PF00355 Rieske [2Fe-2S] domain AOC03_11610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AOC03_11620 PF00106 short chain dehydrogenase AOC03_11625 PF07690 Major Facilitator Superfamily AOC03_11645 PF03466 LysR substrate binding domain AOC03_11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_11650 PF07681 DoxX AOC03_11655 PF03358 NADPH-dependent FMN reductase AOC03_11670 PF17954 Quercetinase C-terminal cupin domain AOC03_11670 PF02678 Pirin AOC03_11675 PF05726 Pirin C-terminal cupin domain AOC03_11675 PF02678 Pirin AOC03_11690 PF00375 Sodium:dicarboxylate symporter family AOC03_11695 PF03466 LysR substrate binding domain AOC03_11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AOC03_11700 PF00202 Aminotransferase class-III AOC03_11705 PF07063 Domain of unknown function (DUF1338) AOC03_11710 PF02913 FAD linked oxidases, C-terminal domain AOC03_11710 PF01565 FAD binding domain AOC03_11730 PF01743 Poly A polymerase head domain AOC03_11730 PF01966 HD domain AOC03_11730 PF12627 Probable RNA and SrmB- binding site of polymerase A AOC03_11735 PF03949 Malic enzyme, NAD binding domain AOC03_11735 PF00390 Malic enzyme, N-terminal domain AOC03_11735 PF01515 Phosphate acetyl/butaryl transferase AOC03_11740 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AOC03_11760 PF01923 Cobalamin adenosyltransferase AOC03_11765 PF09190 DALR domain AOC03_11765 PF01406 tRNA synthetases class I (C) catalytic domain AOC03_11770 PF00478 IMP dehydrogenase / GMP reductase domain AOC03_11770 PF00571 CBS domain AOC03_11775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AOC03_11775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AOC03_11775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AOC03_11775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AOC03_11780 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AOC03_11780 PF01243 Pyridoxamine 5'-phosphate oxidase AOC03_11785 PF13533 Biotin-lipoyl like AOC03_11805 PF16884 N-terminal domain of oxidoreductase AOC03_11805 PF00107 Zinc-binding dehydrogenase AOC03_11810 PF00465 Iron-containing alcohol dehydrogenase AOC03_11815 PF00440 Bacterial regulatory proteins, tetR family AOC03_11815 PF16925 Tetracyclin repressor-like, C-terminal domain AOC03_11820 PF00171 Aldehyde dehydrogenase family AOC03_11830 PF00875 DNA photolyase AOC03_11830 PF03441 FAD binding domain of DNA photolyase AOC03_11855 PF00194 Eukaryotic-type carbonic anhydrase AOC03_11875 PF00501 AMP-binding enzyme AOC03_11875 PF13193 AMP-binding enzyme C-terminal domain AOC03_11880 PF00378 Enoyl-CoA hydratase/isomerase AOC03_11885 PF01614 Bacterial transcriptional regulator AOC03_11885 PF09339 IclR helix-turn-helix domain AOC03_11905 PF00145 C-5 cytosine-specific DNA methylase AOC03_11950 PF12833 Helix-turn-helix domain AOC03_11955 PF01051 Initiator Replication protein AOC03_11960 PF03389 MobA/MobL family AOC03_11965 PF00145 C-5 cytosine-specific DNA methylase AOC03_12010 PF12833 Helix-turn-helix domain AOC03_12015 PF01051 Initiator Replication protein AOC03_12020 PF03389 MobA/MobL family AOC03_12045 PF01051 Initiator Replication protein AOC03_12070 PF01051 Initiator Replication protein AOC03_12075 PF03432 Relaxase/Mobilisation nuclease domain AOC03_12110 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AOC03_12150 PF05973 Phage derived protein Gp49-like (DUF891) AOC03_12165 PF00557 Metallopeptidase family M24 AOC03_12175 PF02082 Transcriptional regulator AOC03_12180 PF02525 Flavodoxin-like fold AOC03_12215 PF01555 DNA methylase AOC03_12245 PF01555 DNA methylase AOC03_12270 PF01420 Type I restriction modification DNA specificity domain AOC03_12280 PF01051 Initiator Replication protein AOC03_12285 PF00376 MerR family regulatory protein AOC03_12285 PF13614 AAA domain AOC03_12295 PF07729 FCD domain AOC03_12295 PF00392 Bacterial regulatory proteins, gntR family AOC03_12300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AOC03_12300 PF13378 Enolase C-terminal domain-like AOC03_12305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AOC03_12305 PF13378 Enolase C-terminal domain-like AOC03_12355 PF02082 Transcriptional regulator AOC03_12360 PF13460 NAD(P)H-binding AOC03_12365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AOC03_12370 PF02687 FtsX-like permease family AOC03_12370 PF12704 MacB-like periplasmic core domain AOC03_12375 PF00005 ABC transporter AOC03_12390 PF00440 Bacterial regulatory proteins, tetR family AOC03_12405 PF00005 ABC transporter AOC03_12430 PF02797 Chalcone and stilbene synthases, C-terminal domain AOC03_12430 PF00195 Chalcone and stilbene synthases, N-terminal domain AOC03_12450 PF00239 Resolvase, N terminal domain AOC03_12450 PF02796 Helix-turn-helix domain of resolvase AOC03_12480 PF13276 HTH-like domain AOC03_12480 PF00665 Integrase core domain AOC03_12480 PF13333 Integrase core domain