AOC03_00090	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOC03_00120	SM01340	AOC03_00120
AOC03_00135	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOC03_00155	SM00382	ATPases associated with a variety of cellular activities
AOC03_00160	SM00382	ATPases associated with a variety of cellular activities
AOC03_00195	SM00382	ATPases associated with a variety of cellular activities
AOC03_00195	SM00962	SRP54-type protein, GTPase domain
AOC03_00195	SM00963	SRP54-type protein, helical bundle domain
AOC03_00225	SM00357	Cold shock protein domain
AOC03_00230	SM00487	DEAD-like helicases superfamily
AOC03_00230	SM00490	helicase superfamily c-terminal domain
AOC03_00255	SM00226	Low molecular weight phosphatase family
AOC03_00260	SM00363	S4 RNA-binding domain
AOC03_00285	SM01005	Alanine racemase, C-terminal domain
AOC03_00290	SM00382	ATPases associated with a variety of cellular activities
AOC03_00305	SM00650	Ribosomal RNA adenine dimethylases
AOC03_00330	SM00052	Putative diguanylate phosphodiesterase
AOC03_00330	SM00091	PAS domain
AOC03_00330	SM00267	diguanylate cyclase
AOC03_00345	SM00996	S-adenosyl-L-homocysteine hydrolase
AOC03_00345	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AOC03_00360	SM00463	Small MutS-related domain
AOC03_00380	SM01230	AOC03_00380
AOC03_00420	SM00849	Metallo-beta-lactamase superfamily
AOC03_00435	SM00382	ATPases associated with a variety of cellular activities
AOC03_00460	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AOC03_00495	SM01228	AOC03_00495
AOC03_00545	SM00344	helix_turn_helix ASNC type
AOC03_00550	SM00917	LeuA allosteric (dimerisation) domain
AOC03_00560	SM00878	Biotin carboxylase C-terminal domain
AOC03_00580	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOC03_00620	SM00829	Enoylreductase
AOC03_00705	SM00855	Phosphoglycerate mutase family
AOC03_00720	SM00382	ATPases associated with a variety of cellular activities
AOC03_00785	SM00830	Chorismate mutase type II
AOC03_00805	SM00905	Dihydroneopterin aldolase
AOC03_00840	SM00073	Histidine Phosphotransfer domain
AOC03_00845	SM00481	DNA polymerase alpha chain like domain
AOC03_00865	SM01130	AOC03_00865
AOC03_00880	SM00342	helix_turn_helix, arabinose operon control protein
AOC03_00905	SM00448	cheY-homologous receiver domain
AOC03_00905	SM00862	Transcriptional regulatory protein, C terminal
AOC03_00910	SM00387	Histidine kinase-like ATPases
AOC03_00910	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_00915	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AOC03_00915	SM00866	AOC03_00915
AOC03_00940	SM00382	ATPases associated with a variety of cellular activities
AOC03_00965	SM00387	Histidine kinase-like ATPases
AOC03_00965	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_00970	SM00448	cheY-homologous receiver domain
AOC03_00970	SM00862	Transcriptional regulatory protein, C terminal
AOC03_00990	SM00448	cheY-homologous receiver domain
AOC03_00990	SM00862	Transcriptional regulatory protein, C terminal
AOC03_00995	SM00387	Histidine kinase-like ATPases
AOC03_00995	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_01040	SM00919	Malic enzyme, NAD binding domain
AOC03_01040	SM01274	AOC03_01040
AOC03_01135	SM00382	ATPases associated with a variety of cellular activities
AOC03_01190	SM00363	S4 RNA-binding domain
AOC03_01310	SM00530	Helix-turn-helix XRE-family like proteins 
AOC03_01335	SM00318	Staphylococcal nuclease homologues
AOC03_01355	SM00487	DEAD-like helicases superfamily
AOC03_01355	SM00490	helicase superfamily c-terminal domain
AOC03_01375	SM00093	SERine  Proteinase INhibitors
AOC03_01380	SM00671	Sel1-like repeats.
AOC03_01390	SM00093	SERine  Proteinase INhibitors
AOC03_01400	SM00093	SERine  Proteinase INhibitors
AOC03_01435	SM00093	SERine  Proteinase INhibitors
AOC03_01445	SM00671	Sel1-like repeats.
AOC03_01450	SM00671	Sel1-like repeats.
AOC03_01480	SM00342	helix_turn_helix, arabinose operon control protein
AOC03_01485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AOC03_01525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AOC03_01585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AOC03_01655	SM00460	Transglutaminase/protease-like homologues
AOC03_01670	SM00487	DEAD-like helicases superfamily
AOC03_01670	SM00490	helicase superfamily c-terminal domain
AOC03_01705	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AOC03_01790	SM01209	AOC03_01790
AOC03_01790	SM01210	AOC03_01790
AOC03_01815	SM00382	ATPases associated with a variety of cellular activities
AOC03_01830	SM00937	AOC03_01830
AOC03_01850	SM00448	cheY-homologous receiver domain
AOC03_01855	SM00387	Histidine kinase-like ATPases
AOC03_01855	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_01865	SM00382	ATPases associated with a variety of cellular activities
AOC03_01865	SM00487	DEAD-like helicases superfamily
AOC03_01865	SM00490	helicase superfamily c-terminal domain
AOC03_01865	SM00847	Helicase associated domain (HA2)  Add an annotation
AOC03_01885	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AOC03_01890	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AOC03_01980	SM00400	zinc finger
AOC03_01980	SM00493	AOC03_01980
AOC03_02015	SM00507	HNH nucleases
AOC03_02035	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOC03_02050	SM00257	Lysin motif
AOC03_02065	SM01323	AOC03_02065
AOC03_02125	SM00855	Phosphoglycerate mutase family
AOC03_02175	SM00382	ATPases associated with a variety of cellular activities
AOC03_02245	SM00257	Lysin motif
AOC03_02265	SM00387	Histidine kinase-like ATPases
AOC03_02265	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_02275	SM00564	beta-propeller repeat
AOC03_02300	SM00028	Tetratricopeptide repeats
AOC03_02310	SM00562	AOC03_02310
AOC03_02320	SM00788	Adenylosuccinate synthetase
AOC03_02380	SM00479	AOC03_02380
AOC03_02400	SM00478	endonuclease III
AOC03_02420	SM00382	ATPases associated with a variety of cellular activities
AOC03_02420	SM01086	C-terminal, D2-small domain, of ClpB protein
AOC03_02435	SM00937	AOC03_02435
AOC03_02450	SM00014	Acid phosphatase homologues
AOC03_02455	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AOC03_02460	SM00851	MGS-like domain
AOC03_02460	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AOC03_02500	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOC03_02545	SM00382	ATPases associated with a variety of cellular activities
AOC03_02590	SM00870	AOC03_02590
AOC03_02600	SM00316	Ribosomal protein S1-like RNA-binding domain
AOC03_02610	SM01329	AOC03_02610
AOC03_02650	SM00382	ATPases associated with a variety of cellular activities
AOC03_02690	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOC03_02690	SM00924	MgtE intracellular N domain
AOC03_02720	SM00382	ATPases associated with a variety of cellular activities
AOC03_02750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AOC03_02800	SM00530	Helix-turn-helix XRE-family like proteins 
AOC03_02835	SM00382	ATPases associated with a variety of cellular activities
AOC03_02840	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AOC03_02875	SM00421	helix_turn_helix, Lux Regulon
AOC03_02875	SM00448	cheY-homologous receiver domain
AOC03_02885	SM00382	ATPases associated with a variety of cellular activities
AOC03_02885	SM00448	cheY-homologous receiver domain
AOC03_02950	SM00479	AOC03_02950
AOC03_02960	SM00450	Rhodanese Homology Domain
AOC03_03130	SM00984	UDP binding domain
AOC03_03145	SM00226	Low molecular weight phosphatase family
AOC03_03155	SM00363	S4 RNA-binding domain
AOC03_03280	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AOC03_03280	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AOC03_03285	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AOC03_03345	SM01004	Delta-aminolevulinic acid dehydratase
AOC03_03360	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOC03_03360	SM00924	MgtE intracellular N domain
AOC03_03405	SM00382	ATPases associated with a variety of cellular activities
AOC03_03420	SM00849	Metallo-beta-lactamase superfamily
AOC03_03425	SM01060	AOC03_03425
AOC03_03500	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AOC03_03515	SM00871	Bacterial transcription activator, effector binding domain
AOC03_03540	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AOC03_03540	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AOC03_03560	SM00883	Chaperonin 10 Kd subunit
AOC03_03610	SM00893	Electron transfer flavoprotein domain
AOC03_03615	SM00893	Electron transfer flavoprotein domain
AOC03_03620	SM00357	Cold shock protein domain
AOC03_03660	SM00257	Lysin motif
AOC03_03665	SM00823	Phosphopantetheine attachment site
AOC03_03670	SM00822	AOC03_03670
AOC03_03675	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AOC03_03705	SM00662	RNA polymerases D
AOC03_03710	SM00363	S4 RNA-binding domain
AOC03_03710	SM01390	AOC03_03710
AOC03_03775	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AOC03_03780	SM01374	AOC03_03780
AOC03_03800	SM00322	K homology RNA-binding domain
AOC03_03815	SM01382	AOC03_03815
AOC03_03815	SM01383	AOC03_03815
AOC03_03835	SM01403	AOC03_03835
AOC03_03840	SM00316	Ribosomal protein S1-like RNA-binding domain
AOC03_03875	SM00845	GatB domain
AOC03_03900	SM00257	Lysin motif
AOC03_03970	SM00849	Metallo-beta-lactamase superfamily
AOC03_03975	SM00382	ATPases associated with a variety of cellular activities
AOC03_03975	SM00962	SRP54-type protein, GTPase domain
AOC03_03975	SM00963	SRP54-type protein, helical bundle domain
AOC03_04005	SM00988	UreE urease accessory protein, N-terminal domain
AOC03_04025	SM00634	Bacterial Ig-like domain (group 1)
AOC03_04095	SM00072	Guanylate kinase homologues.
AOC03_04100	SM01409	AOC03_04100
AOC03_04105	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOC03_04115	SM00487	DEAD-like helicases superfamily
AOC03_04115	SM00490	helicase superfamily c-terminal domain
AOC03_04150	SM00382	ATPases associated with a variety of cellular activities
AOC03_04185	SM00382	ATPases associated with a variety of cellular activities
AOC03_04195	SM01103	AOC03_04195
AOC03_04220	SM00864	Tubulin/FtsZ family, GTPase domain
AOC03_04220	SM00865	Tubulin/FtsZ family, C-terminal domain
AOC03_04225	SM00842	Cell division protein FtsA
AOC03_04275	SM00644	AOC03_04275
AOC03_04300	SM00904	Riboflavin kinase
AOC03_04325	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOC03_04370	SM00836	DALR anticodon binding domain
AOC03_04445	SM00849	Metallo-beta-lactamase superfamily
AOC03_04450	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AOC03_04520	SM00563	Phosphate acyltransferases
AOC03_04560	SM00073	Histidine Phosphotransfer domain
AOC03_04560	SM00260	Two component signalling adaptor domain
AOC03_04560	SM00387	Histidine kinase-like ATPases
AOC03_04560	SM00448	cheY-homologous receiver domain
AOC03_04560	SM01231	AOC03_04560
AOC03_04565	SM00138	Methyltransferase, chemotaxis proteins 
AOC03_04570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AOC03_04575	SM00260	Two component signalling adaptor domain
AOC03_04580	SM00448	cheY-homologous receiver domain
AOC03_04585	SM00448	cheY-homologous receiver domain
AOC03_04595	SM00448	cheY-homologous receiver domain
AOC03_04595	SM00862	Transcriptional regulatory protein, C terminal
AOC03_04600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOC03_04600	SM00387	Histidine kinase-like ATPases
AOC03_04600	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_04605	SM00382	ATPases associated with a variety of cellular activities
AOC03_04655	SM00382	ATPases associated with a variety of cellular activities
AOC03_04730	SM01264	AOC03_04730
AOC03_04750	SM00357	Cold shock protein domain
AOC03_04820	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOC03_04820	SM00876	Biotin and Thiamin Synthesis associated domain
AOC03_04855	SM00327	von Willebrand factor (vWF) type A domain
AOC03_04860	SM00434	DNA Topoisomerase IV
AOC03_04915	SM00965	Secretin and TonB N terminus short domain
AOC03_04945	SM00663	RNA polymerase I subunit A N-terminus
AOC03_04970	SM00649	Ribosomal protein L11/L12
AOC03_04975	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AOC03_04975	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AOC03_04995	SM00838	Elongation factor G C-terminus
AOC03_04995	SM00889	Elongation factor G, domain IV
AOC03_05015	SM00825	Beta-ketoacyl synthase
AOC03_05135	SM00448	cheY-homologous receiver domain
AOC03_05135	SM00862	Transcriptional regulatory protein, C terminal
AOC03_05205	SM00382	ATPases associated with a variety of cellular activities
AOC03_05205	SM00994	ClpX C4-type zinc finger
AOC03_05205	SM01086	C-terminal, D2-small domain, of ClpB protein
AOC03_05230	SM00836	DALR anticodon binding domain
AOC03_05230	SM01016	Arginyl tRNA synthetase N terminal dom
AOC03_05245	SM00901	AOC03_05245
AOC03_05395	SM00825	Beta-ketoacyl synthase
AOC03_05425	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOC03_05425	SM01091	Transporter associated domain
AOC03_05465	SM00478	endonuclease III
AOC03_05475	SM00487	DEAD-like helicases superfamily
AOC03_05475	SM00490	helicase superfamily c-terminal domain
AOC03_05495	SM00357	Cold shock protein domain
AOC03_05495	SM00382	ATPases associated with a variety of cellular activities
AOC03_05495	SM00959	Rho termination factor, N-terminal domain
AOC03_05515	SM00411	bacterial (prokaryotic) histone like domain
AOC03_05520	SM00873	B3/4 domain
AOC03_05520	SM00874	tRNA synthetase B5 domain
AOC03_05520	SM00896	Ferredoxin-fold anticodon binding domain
AOC03_05590	SM00829	Enoylreductase
AOC03_05615	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AOC03_05615	SM00465	GIY-YIG type nucleases (URI domain)
AOC03_05650	SM00387	Histidine kinase-like ATPases
AOC03_05650	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_05660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AOC03_05660	SM00387	Histidine kinase-like ATPases
AOC03_05660	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_05665	SM00448	cheY-homologous receiver domain
AOC03_05665	SM00862	Transcriptional regulatory protein, C terminal
AOC03_05675	SM00382	ATPases associated with a variety of cellular activities
AOC03_05725	SM00382	ATPases associated with a variety of cellular activities
AOC03_05770	SM00938	Nitrogen regulatory protein P-II
AOC03_05785	SM00477	DNA/RNA non-specific endonuclease
AOC03_05785	SM00892	DNA/RNA non-specific endonuclease
AOC03_05805	SM00947	Carbonic anhydrase
AOC03_05810	SM01116	AOC03_05810
AOC03_05825	SM00155	Phospholipase D. Active site motifs.
AOC03_05975	SM00867	YceI-like domain 
AOC03_05990	SM00487	DEAD-like helicases superfamily
AOC03_05990	SM00490	helicase superfamily c-terminal domain
AOC03_06030	SM00563	Phosphate acyltransferases
AOC03_06035	SM00387	Histidine kinase-like ATPases
AOC03_06035	SM00433	TopoisomeraseII
AOC03_06175	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AOC03_06190	SM00316	Ribosomal protein S1-like RNA-binding domain
AOC03_06190	SM00357	Cold shock protein domain
AOC03_06190	SM00955	AOC03_06190
AOC03_06220	SM00900	AOC03_06220
AOC03_06260	SM00382	ATPases associated with a variety of cellular activities
AOC03_06310	SM00382	ATPases associated with a variety of cellular activities
AOC03_06315	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOC03_06325	SM00244	prohibitin homologues
AOC03_06390	SM00257	Lysin motif
AOC03_06410	SM00387	Histidine kinase-like ATPases
AOC03_06410	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_06410	SM00448	cheY-homologous receiver domain
AOC03_06440	SM01234	AOC03_06440
AOC03_06455	SM00382	ATPases associated with a variety of cellular activities
AOC03_06455	SM00760	Bacterial dnaA protein helix-turn-helix domain
AOC03_06460	SM00480	DNA polymerase III beta subunit
AOC03_06470	SM00387	Histidine kinase-like ATPases
AOC03_06470	SM00433	TopoisomeraseII
AOC03_06510	SM00829	Enoylreductase
AOC03_06565	SM00363	S4 RNA-binding domain
AOC03_06580	SM00271	DnaJ molecular chaperone homology domain
AOC03_06640	SM00382	ATPases associated with a variety of cellular activities
AOC03_06650	SM00271	DnaJ molecular chaperone homology domain
AOC03_06715	SM00732	Likely ribonuclease with RNase H fold.
AOC03_06735	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AOC03_06785	SM00316	Ribosomal protein S1-like RNA-binding domain
AOC03_06805	SM01387	AOC03_06805
AOC03_06810	SM00316	Ribosomal protein S1-like RNA-binding domain
AOC03_06810	SM00322	K homology RNA-binding domain
AOC03_06840	SM00829	Enoylreductase
AOC03_06860	SM00382	ATPases associated with a variety of cellular activities
AOC03_06895	SM00448	cheY-homologous receiver domain
AOC03_06895	SM00850	LytTr DNA-binding domain
AOC03_06925	SM00382	ATPases associated with a variety of cellular activities
AOC03_06965	SM00861	Transketolase, pyrimidine binding domain
AOC03_06985	SM00881	CoA binding domain
AOC03_07005	SM00984	UDP binding domain
AOC03_07020	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AOC03_07070	SM00822	AOC03_07070
AOC03_07085	SM00448	cheY-homologous receiver domain
AOC03_07085	SM00862	Transcriptional regulatory protein, C terminal
AOC03_07090	SM00316	Ribosomal protein S1-like RNA-binding domain
AOC03_07090	SM00732	Likely ribonuclease with RNase H fold.
AOC03_07125	SM00382	ATPases associated with a variety of cellular activities
AOC03_07130	SM00563	Phosphate acyltransferases
AOC03_07205	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOC03_07210	SM01130	AOC03_07210
AOC03_07225	SM00869	Autotransporter beta-domain
AOC03_07340	SM01400	AOC03_07340
AOC03_07470	SM01211	AOC03_07470
AOC03_07475	SM00530	Helix-turn-helix XRE-family like proteins 
AOC03_07500	SM00644	AOC03_07500
AOC03_07640	SM00382	ATPases associated with a variety of cellular activities
AOC03_07645	SM00947	Carbonic anhydrase
AOC03_07670	SM00861	Transketolase, pyrimidine binding domain
AOC03_07690	SM00382	ATPases associated with a variety of cellular activities
AOC03_07705	SM00382	ATPases associated with a variety of cellular activities
AOC03_07730	SM00342	helix_turn_helix, arabinose operon control protein
AOC03_07835	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AOC03_07835	SM00534	ATPase domain of DNA mismatch repair MUTS family
AOC03_07840	SM00957	SecA DEAD-like domain
AOC03_07840	SM00958	SecA preprotein cross-linking domain
AOC03_07880	SM00316	Ribosomal protein S1-like RNA-binding domain
AOC03_07885	SM00363	S4 RNA-binding domain
AOC03_07930	SM00382	ATPases associated with a variety of cellular activities
AOC03_07935	SM00382	ATPases associated with a variety of cellular activities
AOC03_07945	SM01091	Transporter associated domain
AOC03_07980	SM01001	AIR carboxylase
AOC03_08010	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOC03_08010	SM00245	tail specific protease
AOC03_08020	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOC03_08085	SM00382	ATPases associated with a variety of cellular activities
AOC03_08090	SM00062	Bacterial periplasmic substrate-binding proteins
AOC03_08090	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AOC03_08095	SM00062	Bacterial periplasmic substrate-binding proteins
AOC03_08095	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AOC03_08100	SM00062	Bacterial periplasmic substrate-binding proteins
AOC03_08100	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AOC03_08150	SM00062	Bacterial periplasmic substrate-binding proteins
AOC03_08165	SM00382	ATPases associated with a variety of cellular activities
AOC03_08195	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AOC03_08200	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AOC03_08200	SM00292	breast cancer carboxy-terminal domain
AOC03_08200	SM00532	Ligase N family
AOC03_08205	SM00028	Tetratricopeptide repeats
AOC03_08220	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOC03_08230	SM00344	helix_turn_helix ASNC type
AOC03_08285	SM00358	Double-stranded RNA binding motif
AOC03_08285	SM00535	Ribonuclease III family
AOC03_08330	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AOC03_08330	SM01232	AOC03_08330
AOC03_08335	SM00954	Region found in RelA / SpoT proteins
AOC03_08370	SM00387	Histidine kinase-like ATPases
AOC03_08375	SM00448	cheY-homologous receiver domain
AOC03_08420	SM00563	Phosphate acyltransferases
AOC03_08435	SM00357	Cold shock protein domain
AOC03_08450	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AOC03_08450	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AOC03_08465	SM01034	Sensors of blue-light using FAD
AOC03_08480	SM00095	Transthyretin
AOC03_08485	SM00450	Rhodanese Homology Domain
AOC03_08490	SM00671	Sel1-like repeats.
AOC03_08520	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AOC03_08520	SM00474	3'-5' exonuclease
AOC03_08520	SM00475	5'-3' exonuclease
AOC03_08520	SM00482	DNA polymerase A domain
AOC03_08545	SM00240	Forkhead associated domain
AOC03_08585	SM00422	helix_turn_helix, mercury resistance
AOC03_08600	SM00843	AOC03_08600
AOC03_08640	SM00479	AOC03_08640
AOC03_08645	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOC03_08660	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AOC03_08690	SM01018	B12 binding domain
AOC03_08695	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AOC03_08700	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AOC03_08770	SM00487	DEAD-like helicases superfamily
AOC03_08825	SM00382	ATPases associated with a variety of cellular activities
AOC03_08895	SM00481	DNA polymerase alpha chain like domain
AOC03_08900	SM00267	diguanylate cyclase
AOC03_08950	SM00528	Domain in histone-like proteins of HNS family
AOC03_08960	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOC03_08990	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AOC03_08990	SM00387	Histidine kinase-like ATPases
AOC03_08990	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_08990	SM00448	cheY-homologous receiver domain
AOC03_08995	SM00841	Elongation factor P, C-terminal
AOC03_08995	SM01185	AOC03_08995
AOC03_09010	SM00052	Putative diguanylate phosphodiesterase
AOC03_09010	SM00267	diguanylate cyclase
AOC03_09030	SM00460	Transglutaminase/protease-like homologues
AOC03_09060	SM00342	helix_turn_helix, arabinose operon control protein
AOC03_09085	SM00460	Transglutaminase/protease-like homologues
AOC03_09105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AOC03_09105	SM00895	AOC03_09105
AOC03_09120	SM00903	Flavin reductase like domain
AOC03_09150	SM00014	Acid phosphatase homologues
AOC03_09190	SM00448	cheY-homologous receiver domain
AOC03_09190	SM00862	Transcriptional regulatory protein, C terminal
AOC03_09195	SM00387	Histidine kinase-like ATPases
AOC03_09195	SM00388	His Kinase A (phosphoacceptor) domain
AOC03_09200	SM01060	AOC03_09200
AOC03_09220	SM00671	Sel1-like repeats.
AOC03_09255	SM00671	Sel1-like repeats.
AOC03_09305	SM00852	Probable molybdopterin binding domain
AOC03_09315	SM00852	Probable molybdopterin binding domain
AOC03_09360	SM00829	Enoylreductase
AOC03_09400	SM00960	Roadblock/LC7 domain
AOC03_09405	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AOC03_09410	SM00062	Bacterial periplasmic substrate-binding proteins
AOC03_09420	SM00382	ATPases associated with a variety of cellular activities
AOC03_09475	SM00382	ATPases associated with a variety of cellular activities
AOC03_09520	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AOC03_09520	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AOC03_09520	SM00493	AOC03_09520
AOC03_09540	SM00382	ATPases associated with a variety of cellular activities
AOC03_09540	SM00464	Found in ATP-dependent protease La (LON)
AOC03_09660	SM01192	AOC03_09660
AOC03_09660	SM01193	AOC03_09660
AOC03_09675	SM01034	Sensors of blue-light using FAD
AOC03_09685	SM00479	AOC03_09685
AOC03_09710	SM00880	AOC03_09710
AOC03_09710	SM01118	AOC03_09710
AOC03_09765	SM00861	Transketolase, pyrimidine binding domain
AOC03_09775	SM00867	YceI-like domain 
AOC03_09790	SM00829	Enoylreductase
AOC03_09800	SM00382	ATPases associated with a variety of cellular activities
AOC03_09805	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AOC03_09855	SM00530	Helix-turn-helix XRE-family like proteins 
AOC03_10080	SM00244	prohibitin homologues
AOC03_10150	SM00487	DEAD-like helicases superfamily
AOC03_10150	SM00490	helicase superfamily c-terminal domain
AOC03_10210	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOC03_10285	SM00448	cheY-homologous receiver domain
AOC03_10285	SM00850	LytTr DNA-binding domain
AOC03_10320	SM00981	AOC03_10320
AOC03_10400	SM00382	ATPases associated with a variety of cellular activities
AOC03_10440	SM00155	Phospholipase D. Active site motifs.
AOC03_10455	SM00493	AOC03_10455
AOC03_10460	SM00474	3'-5' exonuclease
AOC03_10525	SM00155	Phospholipase D. Active site motifs.
AOC03_10530	SM00671	Sel1-like repeats.
AOC03_10555	SM00382	ATPases associated with a variety of cellular activities
AOC03_10575	SM00434	DNA Topoisomerase IV
AOC03_10605	SM00220	Serine/Threonine protein kinases, catalytic domain
AOC03_10620	SM00710	Parallel beta-helix repeats
AOC03_10630	SM00729	Elongator protein 3, MiaB family, Radical SAM
AOC03_10660	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AOC03_10700	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AOC03_10780	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AOC03_10790	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AOC03_10800	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AOC03_10815	SM00382	ATPases associated with a variety of cellular activities
AOC03_10815	SM01086	C-terminal, D2-small domain, of ClpB protein
AOC03_10820	SM00986	Uracil DNA glycosylase superfamily
AOC03_10820	SM00987	UreE urease accessory protein, C-terminal domain 
AOC03_10835	SM00316	Ribosomal protein S1-like RNA-binding domain
AOC03_10840	SM00411	bacterial (prokaryotic) histone like domain
AOC03_10850	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AOC03_10880	SM00487	DEAD-like helicases superfamily
AOC03_10880	SM00490	helicase superfamily c-terminal domain
AOC03_10880	SM00982	AOC03_10880
AOC03_10880	SM01058	CarD-like/TRCF domain
AOC03_10890	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AOC03_10935	SM00411	bacterial (prokaryotic) histone like domain
AOC03_10945	SM00798	AICARFT/IMPCHase bienzyme
AOC03_10945	SM00851	MGS-like domain
AOC03_11010	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AOC03_11065	SM00869	Autotransporter beta-domain
AOC03_11235	SM00470	ParB-like nuclease domain
AOC03_11240	SM00382	ATPases associated with a variety of cellular activities
AOC03_11270	SM00822	AOC03_11270
AOC03_11300	SM00855	Phosphoglycerate mutase family
AOC03_11335	SM01150	AOC03_11335
AOC03_11385	SM00671	Sel1-like repeats.
AOC03_11415	SM00490	helicase superfamily c-terminal domain
AOC03_11455	SM00974	AOC03_11455
AOC03_11490	SM00487	DEAD-like helicases superfamily
AOC03_11490	SM00490	helicase superfamily c-terminal domain
AOC03_11515	SM00530	Helix-turn-helix XRE-family like proteins 
AOC03_11535	SM01119	AOC03_11535
AOC03_11590	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AOC03_11705	SM01150	AOC03_11705
AOC03_11735	SM00919	Malic enzyme, NAD binding domain
AOC03_11735	SM01274	AOC03_11735
AOC03_11765	SM00840	AOC03_11765
AOC03_11770	SM00116	Domain in cystathionine beta-synthase and other proteins.
AOC03_11770	SM01240	AOC03_11770
AOC03_11855	SM01057	Eukaryotic-type carbonic anhydrase
AOC03_11865	SM00248	ankyrin repeats
AOC03_11885	SM00346	helix_turn_helix isocitrate lyase regulation
AOC03_11950	SM00342	helix_turn_helix, arabinose operon control protein
AOC03_12010	SM00342	helix_turn_helix, arabinose operon control protein
AOC03_12155	SM00530	Helix-turn-helix XRE-family like proteins 
AOC03_12160	SM00857	Resolvase, N terminal domain
AOC03_12185	SM00248	ankyrin repeats
AOC03_12210	SM00487	DEAD-like helicases superfamily
AOC03_12240	SM00487	DEAD-like helicases superfamily
AOC03_12295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AOC03_12300	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AOC03_12305	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AOC03_12375	SM00382	ATPases associated with a variety of cellular activities
AOC03_12405	SM00382	ATPases associated with a variety of cellular activities
AOC03_12450	SM00857	Resolvase, N terminal domain
