locus-tag class description CFM90_00045 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_00045 IPR005225 Small GTP-binding protein domain CFM90_00045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00045 IPR031157 Tr-type G domain, conserved site CFM90_00045 IPR033720 Elongation factor Tu, domain 2 CFM90_00045 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CFM90_00045 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CFM90_00045 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CFM90_00045 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CFM90_00045 IPR004161 Translation elongation factor EFTu-like, domain 2 CFM90_00045 IPR000795 Transcription factor, GTP-binding domain CFM90_00060 IPR005824 KOW CFM90_00060 IPR036735 NusG, N-terminal domain superfamily CFM90_00060 IPR014722 Ribosomal protein L2, domain 2 CFM90_00060 IPR008991 Translation protein SH3-like domain superfamily CFM90_00060 IPR006645 NusG, N-terminal CFM90_00060 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CFM90_00060 IPR001062 Transcription antitermination protein, NusG CFM90_00065 IPR020783 Ribosomal protein L11, C-terminal CFM90_00065 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CFM90_00065 IPR006519 Ribosomal protein L11, bacterial-type CFM90_00065 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CFM90_00065 IPR000911 Ribosomal protein L11/L12 CFM90_00065 IPR020785 Ribosomal protein L11, conserved site CFM90_00065 IPR020784 Ribosomal protein L11, N-terminal CFM90_00070 IPR023673 Ribosomal protein L1, conserved site CFM90_00070 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CFM90_00070 IPR005878 Ribosomal protein L1, bacterial-type CFM90_00070 IPR002143 Ribosomal protein L1 CFM90_00070 IPR023674 Ribosomal protein L1-like CFM90_00070 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CFM90_00075 IPR001790 Ribosomal protein L10P CFM90_00075 IPR002363 Ribosomal protein L10, eubacterial, conserved site CFM90_00075 IPR022973 Ribosomal protein L10 CFM90_00080 IPR000206 Ribosomal protein L7/L12 CFM90_00080 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CFM90_00080 IPR013823 Ribosomal protein L7/L12, C-terminal CFM90_00080 IPR008932 Ribosomal protein L7/L12, oligomerisation CFM90_00080 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CFM90_00085 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CFM90_00085 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CFM90_00085 IPR015712 DNA-directed RNA polymerase, subunit 2 CFM90_00085 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CFM90_00085 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CFM90_00085 IPR007121 RNA polymerase, beta subunit, conserved site CFM90_00085 IPR007644 RNA polymerase, beta subunit, protrusion CFM90_00085 IPR007642 RNA polymerase Rpb2, domain 2 CFM90_00085 IPR014724 RNA polymerase Rpb2, OB-fold CFM90_00085 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily CFM90_00085 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CFM90_00085 IPR007641 RNA polymerase Rpb2, domain 7 CFM90_00085 IPR007645 RNA polymerase Rpb2, domain 3 CFM90_00090 IPR006592 RNA polymerase, N-terminal CFM90_00090 IPR007080 RNA polymerase Rpb1, domain 1 CFM90_00090 IPR007083 RNA polymerase Rpb1, domain 4 CFM90_00090 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CFM90_00090 IPR007081 RNA polymerase Rpb1, domain 5 CFM90_00090 IPR000722 RNA polymerase, alpha subunit CFM90_00090 IPR007066 RNA polymerase Rpb1, domain 3 CFM90_00090 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CFM90_00090 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CFM90_00095 IPR018671 Protein of unknown function DUF2138 CFM90_00100 IPR009558 Protein of unknown function DUF1175 CFM90_00105 IPR011625 Alpha-2-macroglobulin, bait region domain CFM90_00105 IPR013783 Immunoglobulin-like fold CFM90_00105 IPR001599 Alpha-2-macroglobulin CFM90_00105 IPR002890 Macroglobulin domain CFM90_00105 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CFM90_00110 IPR012338 Beta-lactamase/transpeptidase-like CFM90_00110 IPR018748 Domain of unknown function DUF2300, secreted CFM90_00110 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal CFM90_00115 IPR019220 Domain of unknown function DUF2135 CFM90_00115 IPR012039 Uncharacterised conserved protein UCP012281 CFM90_00120 IPR012039 Uncharacterised conserved protein UCP012281 CFM90_00120 IPR019220 Domain of unknown function DUF2135 CFM90_00130 IPR001650 Helicase, C-terminal CFM90_00130 IPR010997 HRDC-like superfamily CFM90_00130 IPR004589 DNA helicase, ATP-dependent, RecQ type CFM90_00130 IPR002121 HRDC domain CFM90_00130 IPR011545 DEAD/DEAH box helicase domain CFM90_00130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00130 IPR018982 RQC domain CFM90_00130 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_00130 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CFM90_00130 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_00130 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CFM90_00135 IPR006032 Ribosomal protein S12/S23 CFM90_00135 IPR005679 Ribosomal protein S12, bacterial-type CFM90_00135 IPR012340 Nucleic acid-binding, OB-fold CFM90_00140 IPR005717 Ribosomal protein S7, bacterial/organellar-type CFM90_00140 IPR023798 Ribosomal protein S7 domain CFM90_00140 IPR036823 Ribosomal protein S7 domain superfamily CFM90_00140 IPR000235 Ribosomal protein S5/S7 CFM90_00140 IPR020606 Ribosomal protein S7, conserved site CFM90_00145 IPR004161 Translation elongation factor EFTu-like, domain 2 CFM90_00145 IPR005225 Small GTP-binding protein domain CFM90_00145 IPR000795 Transcription factor, GTP-binding domain CFM90_00145 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_00145 IPR004540 Translation elongation factor EFG/EF2 CFM90_00145 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_00145 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_00145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00145 IPR031157 Tr-type G domain, conserved site CFM90_00145 IPR035647 EF-G domain III/V-like CFM90_00145 IPR000640 Elongation factor EFG, domain V-like CFM90_00145 IPR035649 EFG, domain V CFM90_00145 IPR009022 Elongation factor G, domain III CFM90_00145 IPR041095 Elongation Factor G, domain II CFM90_00145 IPR005517 Translation elongation factor EFG/EF2, domain IV CFM90_00150 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CFM90_00150 IPR004161 Translation elongation factor EFTu-like, domain 2 CFM90_00150 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CFM90_00150 IPR033720 Elongation factor Tu, domain 2 CFM90_00150 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CFM90_00150 IPR005225 Small GTP-binding protein domain CFM90_00150 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_00150 IPR000795 Transcription factor, GTP-binding domain CFM90_00150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00150 IPR031157 Tr-type G domain, conserved site CFM90_00150 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CFM90_00155 IPR027486 Ribosomal protein S10 domain CFM90_00155 IPR018268 Ribosomal protein S10, conserved site CFM90_00155 IPR036838 Ribosomal protein S10 domain superfamily CFM90_00155 IPR001848 Ribosomal protein S10 CFM90_00160 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_00160 IPR000597 Ribosomal protein L3 CFM90_00160 IPR019927 Ribosomal protein L3, bacterial/organelle-type CFM90_00160 IPR019926 Ribosomal protein L3, conserved site CFM90_00165 IPR002136 Ribosomal protein L4/L1e CFM90_00165 IPR023574 Ribosomal protein L4 domain superfamily CFM90_00165 IPR013005 50S ribosomal protein uL4 CFM90_00170 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CFM90_00170 IPR013025 Ribosomal protein L25/L23 CFM90_00170 IPR012678 Ribosomal protein L23/L15e core domain superfamily CFM90_00175 IPR008991 Translation protein SH3-like domain superfamily CFM90_00175 IPR014726 Ribosomal protein L2, domain 3 CFM90_00175 IPR012340 Nucleic acid-binding, OB-fold CFM90_00175 IPR022671 Ribosomal protein L2, conserved site CFM90_00175 IPR022666 Ribosomal Proteins L2, RNA binding domain CFM90_00175 IPR022669 Ribosomal protein L2, C-terminal CFM90_00175 IPR014722 Ribosomal protein L2, domain 2 CFM90_00175 IPR005880 Ribosomal protein L2, bacterial/organellar-type CFM90_00175 IPR002171 Ribosomal protein L2 CFM90_00180 IPR005732 Ribosomal protein S19, bacterial-type CFM90_00180 IPR002222 Ribosomal protein S19/S15 CFM90_00180 IPR023575 Ribosomal protein S19, superfamily CFM90_00180 IPR020934 Ribosomal protein S19 conserved site CFM90_00185 IPR001063 Ribosomal protein L22/L17 CFM90_00185 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CFM90_00185 IPR018260 Ribosomal protein L22/L17, conserved site CFM90_00185 IPR036394 Ribosomal protein L22/L17 superfamily CFM90_00190 IPR009019 K homology domain superfamily, prokaryotic type CFM90_00190 IPR004087 K Homology domain CFM90_00190 IPR004044 K Homology domain, type 2 CFM90_00190 IPR001351 Ribosomal protein S3, C-terminal CFM90_00190 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CFM90_00190 IPR015946 K homology domain-like, alpha/beta CFM90_00190 IPR018280 Ribosomal protein S3, conserved site CFM90_00190 IPR005704 Ribosomal protein S3, bacterial-type CFM90_00195 IPR000114 Ribosomal protein L16 CFM90_00195 IPR016180 Ribosomal protein L10e/L16 CFM90_00195 IPR020798 Ribosomal protein L16, conserved site CFM90_00195 IPR036920 Ribosomal protein L10e/L16 superfamily CFM90_00200 IPR018254 Ribosomal protein L29, conserved site CFM90_00200 IPR001854 Ribosomal protein L29/L35 CFM90_00200 IPR036049 Ribosomal protein L29/L35 superfamily CFM90_00205 IPR019979 Ribosomal protein S17, conserved site CFM90_00205 IPR019984 30S ribosomal protein S17 CFM90_00205 IPR000266 Ribosomal protein S17/S11 CFM90_00205 IPR012340 Nucleic acid-binding, OB-fold CFM90_00210 IPR005745 Ribosomal protein L14P, bacterial-type CFM90_00210 IPR000218 Ribosomal protein L14P CFM90_00210 IPR036853 Ribosomal protein L14 superfamily CFM90_00210 IPR019972 Ribosomal protein L14P, conserved site CFM90_00215 IPR014722 Ribosomal protein L2, domain 2 CFM90_00215 IPR008991 Translation protein SH3-like domain superfamily CFM90_00215 IPR005824 KOW CFM90_00215 IPR041988 Ribosomal Protein L26/L24, KOW domain CFM90_00215 IPR003256 Ribosomal protein L24 CFM90_00220 IPR031310 Ribosomal protein L5, N-terminal CFM90_00220 IPR022803 Ribosomal protein L5 domain superfamily CFM90_00220 IPR020929 Ribosomal protein L5, conserved site CFM90_00220 IPR031309 Ribosomal protein L5, C-terminal CFM90_00220 IPR020930 Ribosomal protein L5, bacterial-type CFM90_00220 IPR002132 Ribosomal protein L5 CFM90_00225 IPR023036 Ribosomal protein S14, bacterial/plastid CFM90_00225 IPR001209 Ribosomal protein S14 CFM90_00230 IPR000630 Ribosomal protein S8 CFM90_00230 IPR035987 Ribosomal protein S8 superfamily CFM90_00235 IPR020040 Ribosomal protein L6, alpha-beta domain CFM90_00235 IPR002358 Ribosomal protein L6, conserved site CFM90_00235 IPR000702 Ribosomal protein L6 CFM90_00235 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CFM90_00235 IPR019906 Ribosomal protein L6, bacterial-type CFM90_00240 IPR004389 Ribosomal protein L18, bacterial-type CFM90_00240 IPR005484 Ribosomal protein L18 CFM90_00245 IPR018192 Ribosomal protein S5, N-terminal, conserved site CFM90_00245 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_00245 IPR013810 Ribosomal protein S5, N-terminal CFM90_00245 IPR000851 Ribosomal protein S5 CFM90_00245 IPR005712 Ribosomal protein S5, bacterial-type CFM90_00245 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_00245 IPR005324 Ribosomal protein S5, C-terminal CFM90_00250 IPR005996 Ribosomal protein L30, bacterial-type CFM90_00250 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CFM90_00250 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CFM90_00255 IPR021131 Ribosomal protein L18e/L15P CFM90_00255 IPR001196 Ribosomal protein L15, conserved site CFM90_00255 IPR036227 Ribosomal L18e/L15P superfamily CFM90_00255 IPR030878 Ribosomal protein L15 CFM90_00255 IPR005749 Ribosomal protein L15, bacterial-type CFM90_00260 IPR026593 Protein translocase subunit SecY CFM90_00260 IPR030659 SecY conserved site CFM90_00260 IPR002208 SecY/SEC61-alpha family CFM90_00260 IPR023201 SecY domain superfamily CFM90_00265 IPR012340 Nucleic acid-binding, OB-fold CFM90_00265 IPR006196 RNA-binding domain, S1, IF1 type CFM90_00265 IPR022967 RNA-binding domain, S1 CFM90_00265 IPR004368 Translation initiation factor IF-1 CFM90_00270 IPR000473 Ribosomal protein L36 CFM90_00270 IPR035977 Ribosomal protein L36 superfamily CFM90_00275 IPR019980 Ribosomal protein S13, bacterial-type CFM90_00275 IPR018269 Ribosomal protein S13, conserved site CFM90_00275 IPR010979 Ribosomal protein S13-like, H2TH CFM90_00275 IPR001892 Ribosomal protein S13 CFM90_00275 IPR027437 30s ribosomal protein S13, C-terminal CFM90_00280 IPR036967 Ribosomal protein S11 superfamily CFM90_00280 IPR018102 Ribosomal S11, conserved site CFM90_00280 IPR019981 Ribosomal protein S11, bacterial-type CFM90_00280 IPR001971 Ribosomal protein S11 CFM90_00285 IPR022801 Ribosomal protein S4/S9 CFM90_00285 IPR001912 Ribosomal protein S4/S9, N-terminal CFM90_00285 IPR005709 Ribosomal protein S4, bacterial-type CFM90_00285 IPR018079 Ribosomal protein S4, conserved site CFM90_00285 IPR002942 RNA-binding S4 domain CFM90_00285 IPR036986 RNA-binding S4 domain superfamily CFM90_00290 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CFM90_00290 IPR011773 DNA-directed RNA polymerase, alpha subunit CFM90_00290 IPR036603 RNA polymerase, RBP11-like subunit CFM90_00290 IPR011260 RNA polymerase, alpha subunit, C-terminal CFM90_00290 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CFM90_00290 IPR011262 DNA-directed RNA polymerase, insert domain CFM90_00295 IPR036373 Ribosomal protein L17 superfamily CFM90_00295 IPR000456 Ribosomal protein L17 CFM90_00305 IPR035671 DsbD gamma CFM90_00305 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CFM90_00305 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CFM90_00305 IPR013766 Thioredoxin domain CFM90_00305 IPR017937 Thioredoxin, conserved site CFM90_00305 IPR036249 Thioredoxin-like superfamily CFM90_00305 IPR022910 Thiol:disulphide interchange protein DsbD CFM90_00305 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CFM90_00310 IPR013785 Aldolase-type TIM barrel CFM90_00310 IPR030656 Delta-aminolevulinic acid dehydratase, active site CFM90_00310 IPR001731 Delta-aminolevulinic acid dehydratase CFM90_00315 IPR030393 EngB-type guanine nucleotide-binding (G) domain CFM90_00315 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CFM90_00315 IPR006073 GTP binding domain CFM90_00315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00320 IPR009056 Cytochrome c-like domain CFM90_00320 IPR024167 Cytochrome c4-like CFM90_00320 IPR036909 Cytochrome c-like domain superfamily CFM90_00325 IPR023494 Cytochrome c biogenesis protein Ccs1/CcsB CFM90_00325 IPR007816 ResB-like domain CFM90_00330 IPR017562 Cytochrome c-type biogenesis protein CcsA CFM90_00330 IPR002541 Cytochrome c assembly protein CFM90_00340 IPR007627 RNA polymerase sigma-70 region 2 CFM90_00340 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_00340 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CFM90_00340 IPR014284 RNA polymerase sigma-70 like domain CFM90_00340 IPR013325 RNA polymerase sigma factor, region 2 CFM90_00340 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_00340 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CFM90_00340 IPR039425 RNA polymerase sigma-70 like CFM90_00350 IPR000572 Oxidoreductase, molybdopterin-binding domain CFM90_00350 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily CFM90_00350 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP CFM90_00350 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_00355 IPR013130 Ferric reductase transmembrane component-like domain CFM90_00355 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ CFM90_00360 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CFM90_00360 IPR002986 Diaminopimelate decarboxylase, LysA CFM90_00360 IPR000183 Ornithine/DAP/Arg decarboxylase CFM90_00360 IPR029066 PLP-binding barrel CFM90_00360 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CFM90_00360 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CFM90_00360 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CFM90_00370 IPR020895 Frataxin conserved site CFM90_00370 IPR002908 Frataxin/CyaY CFM90_00370 IPR036524 Frataxin/CyaY superfamily CFM90_00375 IPR024473 Transposase, IS4, N-terminal CFM90_00375 IPR002559 Transposase, IS4-like CFM90_00375 IPR012337 Ribonuclease H-like superfamily CFM90_00380 IPR031376 Penicillin-binding protein, OB-like domain CFM90_00380 IPR012338 Beta-lactamase/transpeptidase-like CFM90_00380 IPR001264 Glycosyl transferase, family 51 CFM90_00380 IPR023346 Lysozyme-like domain superfamily CFM90_00380 IPR036950 Penicillin binding protein transglycosylase domain CFM90_00380 IPR001460 Penicillin-binding protein, transpeptidase CFM90_00405 IPR038591 NolW-like superfamily CFM90_00405 IPR013355 Type IV pilus secretin PilQ CFM90_00405 IPR011662 Secretin/TonB, short N-terminal domain CFM90_00405 IPR001775 GspD/PilQ family CFM90_00405 IPR005644 NolW-like CFM90_00405 IPR004845 Type II secretion system GspD, conserved site CFM90_00405 IPR004846 Type II/III secretion system CFM90_00405 IPR021731 AMIN domain CFM90_00410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00410 IPR023000 Shikimate kinase, conserved site CFM90_00410 IPR000623 Shikimate kinase/Threonine synthase-like 1 CFM90_00410 IPR031322 Shikimate kinase/gluconokinase CFM90_00415 IPR016037 3-dehydroquinate synthase AroB CFM90_00415 IPR030960 3-dehydroquinate synthase domain CFM90_00415 IPR030963 3-dehydroquinate synthase family CFM90_00420 IPR003607 HD/PDEase domain CFM90_00420 IPR023023 dNTP triphosphohydrolase, type 2 CFM90_00420 IPR006261 dNTP triphosphohydrolase CFM90_00420 IPR026875 Phosphohydrolase-associated domain CFM90_00420 IPR006674 HD domain CFM90_00425 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CFM90_00425 IPR005618 Outer membrane protein, OmpW CFM90_00435 IPR029055 Nucleophile aminohydrolases, N-terminal CFM90_00435 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily CFM90_00435 IPR013785 Aldolase-type TIM barrel CFM90_00435 IPR017932 Glutamine amidotransferase type 2 domain CFM90_00435 IPR002932 Glutamate synthase domain CFM90_00435 IPR006982 Glutamate synthase, central-N CFM90_00435 IPR002489 Glutamate synthase, alpha subunit, C-terminal CFM90_00440 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_00440 IPR023753 FAD/NAD(P)-binding domain CFM90_00440 IPR028261 Dihydroprymidine dehydrogenase domain II CFM90_00440 IPR009051 Alpha-helical ferredoxin CFM90_00440 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 CFM90_00445 IPR042100 Bordetella uptake gene, domain 1 CFM90_00445 IPR005064 Bordetella uptake gene CFM90_00450 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CFM90_00450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00450 IPR017871 ABC transporter, conserved site CFM90_00450 IPR003439 ABC transporter-like CFM90_00450 IPR003593 AAA+ ATPase domain CFM90_00455 IPR030802 ABC transporter permease MalE CFM90_00455 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CFM90_00460 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD CFM90_00460 IPR003399 Mce/MlaD CFM90_00465 IPR007428 MlaA lipoprotein CFM90_00480 IPR003593 AAA+ ATPase domain CFM90_00480 IPR003439 ABC transporter-like CFM90_00480 IPR017871 ABC transporter, conserved site CFM90_00480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00485 IPR013525 ABC-2 type transporter CFM90_00485 IPR000412 ABC-2 transporter CFM90_00495 IPR001986 Enolpyruvate transferase domain CFM90_00495 IPR036968 Enolpyruvate transferase domain superfamily CFM90_00495 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CFM90_00495 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CFM90_00500 IPR013820 ATP phosphoribosyltransferase, catalytic domain CFM90_00500 IPR018198 ATP phosphoribosyltransferase, conserved site CFM90_00500 IPR001348 ATP phosphoribosyltransferase HisG CFM90_00500 IPR024893 ATP phosphoribosyltransferase HisG, short form CFM90_00505 IPR001692 Histidinol dehydrogenase, conserved site CFM90_00505 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_00505 IPR022695 Histidinol dehydrogenase, monofunctional CFM90_00505 IPR012131 Histidinol dehydrogenase CFM90_00510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_00510 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_00510 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_00510 IPR005861 Histidinol-phosphate aminotransferase family CFM90_00510 IPR004839 Aminotransferase, class I/classII CFM90_00515 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_00515 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CFM90_00515 IPR000807 Imidazoleglycerol-phosphate dehydratase CFM90_00515 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily CFM90_00520 IPR002771 Multiple antibiotic resistance (MarC)-related CFM90_00525 IPR017926 Glutamine amidotransferase CFM90_00525 IPR029062 Class I glutamine amidotransferase-like CFM90_00525 IPR010139 Imidazole glycerol phosphate synthase, subunit H CFM90_00530 IPR006062 Histidine biosynthesis CFM90_00530 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CFM90_00530 IPR013785 Aldolase-type TIM barrel CFM90_00530 IPR011060 Ribulose-phosphate binding barrel CFM90_00530 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CFM90_00535 IPR013785 Aldolase-type TIM barrel CFM90_00535 IPR011060 Ribulose-phosphate binding barrel CFM90_00535 IPR004651 Histidine biosynthesis, HisF CFM90_00535 IPR006062 Histidine biosynthesis CFM90_00540 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CFM90_00540 IPR026660 Phosphoribosyl-AMP cyclohydrolase CFM90_00540 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CFM90_00545 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CFM90_00545 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CFM90_00555 IPR003369 Sec-independent protein translocase protein TatA/B/E CFM90_00555 IPR006312 Sec-independent protein translocase protein TatA/E CFM90_00560 IPR018448 Twin-arginine translocation protein TatB CFM90_00560 IPR003369 Sec-independent protein translocase protein TatA/B/E CFM90_00565 IPR002033 Sec-independent periplasmic protein translocase TatC CFM90_00565 IPR019820 Sec-independent periplasmic protein translocase, conserved site CFM90_00570 IPR024473 Transposase, IS4, N-terminal CFM90_00570 IPR002559 Transposase, IS4-like CFM90_00570 IPR012337 Ribonuclease H-like superfamily CFM90_00575 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_00575 IPR003593 AAA+ ATPase domain CFM90_00575 IPR017871 ABC transporter, conserved site CFM90_00575 IPR003439 ABC transporter-like CFM90_00575 IPR040582 MalK, OB fold domain CFM90_00575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00575 IPR005116 Transport-associated OB, type 1 CFM90_00580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_00580 IPR035906 MetI-like superfamily CFM90_00585 IPR026045 Ferric binding protein CFM90_00590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_00590 IPR005467 Histidine kinase domain CFM90_00590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_00590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_00590 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_00590 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_00595 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_00595 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_00595 IPR001789 Signal transduction response regulator, receiver domain CFM90_00595 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_00595 IPR011006 CheY-like superfamily CFM90_00595 IPR039420 Transcriptional regulatory protein WalR-like CFM90_00605 IPR033900 Porin domain, Gram-negative type CFM90_00605 IPR002299 Porin, Neisseria sp. type CFM90_00605 IPR001702 Porin, Gram-negative type CFM90_00605 IPR023614 Porin domain superfamily CFM90_00610 IPR011782 Peptidase S1C, Do CFM90_00610 IPR001940 Peptidase S1C CFM90_00610 IPR009003 Peptidase S1, PA clan CFM90_00610 IPR041489 PDZ domain 6 CFM90_00610 IPR001478 PDZ domain CFM90_00610 IPR036034 PDZ superfamily CFM90_00615 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CFM90_00615 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CFM90_00620 IPR036019 Gated mechanosensitive channel CFM90_00620 IPR019823 Large-conductance mechanosensitive channel, conserved site CFM90_00620 IPR001185 Large-conductance mechanosensitive channel CFM90_00620 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CFM90_00625 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CFM90_00625 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CFM90_00625 IPR014349 Rieske iron-sulphur protein CFM90_00625 IPR005805 Rieske iron-sulphur protein, C-terminal CFM90_00625 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal CFM90_00625 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit CFM90_00630 IPR030689 Cytochrome b CFM90_00630 IPR016174 Di-haem cytochrome, transmembrane CFM90_00630 IPR027387 Cytochrome b/b6-like domain superfamily CFM90_00630 IPR036150 Cytochrome b/b6, C-terminal domain superfamily CFM90_00630 IPR005798 Cytochrome b/b6, C-terminal CFM90_00630 IPR005797 Cytochrome b/b6, N-terminal CFM90_00635 IPR036909 Cytochrome c-like domain superfamily CFM90_00635 IPR009056 Cytochrome c-like domain CFM90_00635 IPR002326 Cytochrome c1 CFM90_00640 IPR004045 Glutathione S-transferase, N-terminal CFM90_00640 IPR034341 Stringent starvation protein A, N-terminal CFM90_00640 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_00640 IPR036249 Thioredoxin-like superfamily CFM90_00640 IPR004046 Glutathione S-transferase, C-terminal CFM90_00640 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_00640 IPR040079 Glutathione Transferase family CFM90_00645 IPR036760 SspB-like superfamily CFM90_00645 IPR007481 Stringent starvation protein B CFM90_00660 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_00660 IPR001789 Signal transduction response regulator, receiver domain CFM90_00660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_00660 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_00660 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_00660 IPR005467 Histidine kinase domain CFM90_00660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_00660 IPR011006 CheY-like superfamily CFM90_00670 IPR029055 Nucleophile aminohydrolases, N-terminal CFM90_00670 IPR000101 Gamma-glutamyltranspeptidase CFM90_00680 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CFM90_00680 IPR006860 FecR protein CFM90_00680 IPR032623 FecR, N-terminal CFM90_00690 IPR010514 COX aromatic rich motif CFM90_00690 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CFM90_00690 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CFM90_00690 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain CFM90_00690 IPR008972 Cupredoxin CFM90_00690 IPR006333 Cytochrome o ubiquinol oxidase subunit II CFM90_00690 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CFM90_00695 IPR014207 Cytochrome o ubiquinol oxidase, subunit I CFM90_00695 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CFM90_00695 IPR000883 Cytochrome c oxidase subunit I CFM90_00695 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CFM90_00695 IPR023616 Cytochrome c oxidase-like, subunit I domain CFM90_00700 IPR014206 Cytochrome o ubiquinol oxidase, subunit III CFM90_00700 IPR035973 Cytochrome c oxidase subunit III-like superfamily CFM90_00700 IPR000298 Cytochrome c oxidase subunit III-like CFM90_00700 IPR024791 Cytochrome c oxidase subunit III CFM90_00700 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CFM90_00700 IPR033946 Ubiquinol oxidase subunit III domain CFM90_00705 IPR014210 Cytochrome o ubiquinol oxidase subunit IV CFM90_00705 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CFM90_00710 IPR017871 ABC transporter, conserved site CFM90_00710 IPR003439 ABC transporter-like CFM90_00710 IPR032781 ABC-transporter extension domain CFM90_00710 IPR022374 Energy-dependent translational throttle protein EttA CFM90_00710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00710 IPR003593 AAA+ ATPase domain CFM90_00730 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_00730 IPR001173 Glycosyltransferase 2-like CFM90_00730 IPR023725 Glucan biosynthesis glucosyltransferase H CFM90_00735 IPR023704 Glucan biosynthesis protein G CFM90_00735 IPR014756 Immunoglobulin E-set CFM90_00735 IPR013783 Immunoglobulin-like fold CFM90_00735 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal CFM90_00735 IPR014438 Glucan biosynthesis protein MdoG/MdoD CFM90_00735 IPR014718 Glycoside hydrolase-type carbohydrate-binding CFM90_00735 IPR011013 Galactose mutarotase-like domain superfamily CFM90_00745 IPR003382 Flavoprotein CFM90_00745 IPR036551 Flavin prenyltransferase-like CFM90_00745 IPR004507 Flavin prenyltransferase UbiX-like CFM90_00750 IPR014434 Monothiol glutaredoxin CFM90_00750 IPR002109 Glutaredoxin CFM90_00750 IPR033658 Glutaredoxin, PICOT-like CFM90_00750 IPR004480 Monothiol glutaredoxin-related CFM90_00750 IPR036249 Thioredoxin-like superfamily CFM90_00755 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CFM90_00755 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CFM90_00755 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFM90_00755 IPR004556 Methyltransferase HemK-like CFM90_00755 IPR007848 Methyltransferase small domain CFM90_00755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_00765 IPR000352 Peptide chain release factor class I CFM90_00765 IPR005139 Peptide chain release factor CFM90_00765 IPR004373 Peptide chain release factor 1 CFM90_00770 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CFM90_00770 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CFM90_00770 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CFM90_00770 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CFM90_00770 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CFM90_00770 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CFM90_00770 IPR036291 NAD(P)-binding domain superfamily CFM90_00770 IPR018214 Glutamyl-tRNA reductase, conserved site CFM90_00780 IPR012676 TGS-like CFM90_00780 IPR023192 TGS-like domain superfamily CFM90_00780 IPR006073 GTP binding domain CFM90_00780 IPR031167 OBG-type guanine nucleotide-binding (G) domain CFM90_00780 IPR012675 Beta-grasp domain superfamily CFM90_00780 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CFM90_00780 IPR013029 YchF, C-terminal domain CFM90_00780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00780 IPR041706 YchF, N-terminal CFM90_00780 IPR004095 TGS CFM90_00790 IPR023346 Lysozyme-like domain superfamily CFM90_00790 IPR008258 Transglycosylase SLT domain 1 CFM90_00810 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_00810 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CFM90_00810 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CFM90_00810 IPR002938 FAD-binding domain CFM90_00815 IPR017937 Thioredoxin, conserved site CFM90_00815 IPR036249 Thioredoxin-like superfamily CFM90_00815 IPR012336 Thioredoxin-like fold CFM90_00815 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CFM90_00815 IPR033954 Disulphide bond isomerase, DsbC/G CFM90_00820 IPR014188 Acrylyl-CoA reductase AcuI CFM90_00820 IPR020843 Polyketide synthase, enoylreductase domain CFM90_00820 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_00820 IPR036291 NAD(P)-binding domain superfamily CFM90_00820 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_00820 IPR011032 GroES-like superfamily CFM90_00830 IPR032692 Integral membrane protein YccS, N-terminal CFM90_00845 IPR002043 Uracil-DNA glycosylase family 1 CFM90_00845 IPR018085 Uracil-DNA glycosylase, active site CFM90_00845 IPR005122 Uracil-DNA glycosylase-like CFM90_00845 IPR036895 Uracil-DNA glycosylase-like domain superfamily CFM90_00855 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CFM90_00855 IPR013798 Indole-3-glycerol phosphate synthase CFM90_00855 IPR011060 Ribulose-phosphate binding barrel CFM90_00855 IPR013785 Aldolase-type TIM barrel CFM90_00860 IPR000312 Glycosyl transferase, family 3 CFM90_00860 IPR017459 Glycosyl transferase family 3, N-terminal domain CFM90_00860 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CFM90_00860 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CFM90_00860 IPR005940 Anthranilate phosphoribosyl transferase CFM90_00870 IPR017926 Glutamine amidotransferase CFM90_00870 IPR029062 Class I glutamine amidotransferase-like CFM90_00870 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CFM90_00875 IPR006805 Anthranilate synthase component I, N-terminal CFM90_00875 IPR015890 Chorismate-utilising enzyme, C-terminal CFM90_00875 IPR005256 Anthranilate synthase component I, PabB-like CFM90_00875 IPR019999 Anthranilate synthase component I-like CFM90_00875 IPR005801 ADC synthase CFM90_00880 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CFM90_00880 IPR037512 Phosphoglycolate phosphatase, prokaryotic CFM90_00880 IPR041492 Haloacid dehalogenase-like hydrolase CFM90_00880 IPR006439 HAD hydrolase, subfamily IA CFM90_00880 IPR036412 HAD-like superfamily CFM90_00880 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CFM90_00880 IPR023214 HAD superfamily CFM90_00890 IPR036767 ApaG domain superfamily CFM90_00890 IPR023065 Uncharacterised protein family ApaG CFM90_00890 IPR007474 ApaG domain CFM90_00910 IPR003736 Phenylacetic acid degradation-related domain CFM90_00910 IPR011973 Phenylacetic acid degradation protein PaaD CFM90_00910 IPR006683 Thioesterase domain CFM90_00910 IPR029069 HotDog domain superfamily CFM90_00915 IPR029045 ClpP/crotonase-like domain superfamily CFM90_00915 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_00915 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_00915 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB CFM90_00920 IPR029045 ClpP/crotonase-like domain superfamily CFM90_00920 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CFM90_00920 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_00920 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_00950 IPR002933 Peptidase M20 CFM90_00950 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_00950 IPR017439 Amidohydrolase CFM90_00950 IPR011650 Peptidase M20, dimerisation domain CFM90_00955 IPR030678 Peptide/nickel binding protein, MppA-type CFM90_00955 IPR039424 Solute-binding protein family 5 CFM90_00955 IPR023765 Solute-binding protein family 5, conserved site CFM90_00955 IPR000914 Solute-binding protein family 5 domain CFM90_00960 IPR035906 MetI-like superfamily CFM90_00960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_00965 IPR035906 MetI-like superfamily CFM90_00965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_00965 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CFM90_00970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00970 IPR017871 ABC transporter, conserved site CFM90_00970 IPR003439 ABC transporter-like CFM90_00970 IPR003593 AAA+ ATPase domain CFM90_00970 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CFM90_00975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_00975 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CFM90_00975 IPR017871 ABC transporter, conserved site CFM90_00975 IPR003439 ABC transporter-like CFM90_00975 IPR003593 AAA+ ATPase domain CFM90_00985 IPR036095 PTS system IIB component-like superfamily CFM90_00985 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CFM90_00985 IPR006327 Phosphotransferase system, fructose IIC component CFM90_00985 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CFM90_00985 IPR013011 Phosphotransferase system, EIIB component, type 2 CFM90_00985 IPR013014 Phosphotransferase system, EIIC component, type 2 CFM90_00990 IPR022463 Fructose 1-phosphate kinase CFM90_00990 IPR017583 Tagatose/fructose phosphokinase CFM90_00990 IPR029056 Ribokinase-like CFM90_00990 IPR011611 Carbohydrate kinase PfkB CFM90_00990 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CFM90_00995 IPR006318 Phosphotransferase system, enzyme I-like CFM90_00995 IPR016152 Phosphotransferase/anion transporter CFM90_00995 IPR000121 PEP-utilising enzyme, C-terminal CFM90_00995 IPR036637 Phosphohistidine domain superfamily CFM90_00995 IPR002178 PTS EIIA type-2 domain CFM90_00995 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_00995 IPR018274 PEP-utilising enzyme, active site CFM90_00995 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CFM90_00995 IPR008279 PEP-utilising enzyme, mobile domain CFM90_00995 IPR035895 HPr-like superfamily CFM90_00995 IPR036618 PtsI, HPr-binding domain superfamily CFM90_00995 IPR023151 PEP-utilising enzyme, conserved site CFM90_00995 IPR040442 Pyruvate kinase-like domain superfamily CFM90_00995 IPR000032 Phosphocarrier protein HPr-like CFM90_00995 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CFM90_00995 IPR008731 Phosphotransferase system, enzyme I N-terminal CFM90_01000 IPR000843 LacI-type HTH domain CFM90_01000 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_01000 IPR028082 Periplasmic binding protein-like I CFM90_01005 IPR006657 Molybdopterin dinucleotide-binding domain CFM90_01005 IPR009010 Aspartate decarboxylase-like domain superfamily CFM90_01005 IPR006656 Molybdopterin oxidoreductase CFM90_01005 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CFM90_01005 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CFM90_01005 IPR037920 Probable oxidoreductase YoaE, C-terminal CFM90_01015 IPR000873 AMP-dependent synthetase/ligase CFM90_01015 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_01015 IPR042099 AMP-dependent synthetase-like superfamily CFM90_01015 IPR020845 AMP-binding, conserved site CFM90_01020 IPR011701 Major facilitator superfamily CFM90_01020 IPR020846 Major facilitator superfamily domain CFM90_01020 IPR005828 Major facilitator, sugar transporter-like CFM90_01020 IPR036259 MFS transporter superfamily CFM90_01020 IPR004736 MFS transporter, metabolite:H symporter CFM90_01020 IPR005829 Sugar transporter, conserved site CFM90_01025 IPR023614 Porin domain superfamily CFM90_01025 IPR002299 Porin, Neisseria sp. type CFM90_01025 IPR001702 Porin, Gram-negative type CFM90_01025 IPR033900 Porin domain, Gram-negative type CFM90_01030 IPR009078 Ferritin-like superfamily CFM90_01030 IPR011566 Ubiquinone biosynthesis protein Coq7 CFM90_01035 IPR035644 MraZ, C-terminal CFM90_01035 IPR020603 MraZ domain CFM90_01035 IPR035642 MraZ, N-terminal CFM90_01035 IPR038619 MraZ superfamily CFM90_01035 IPR007159 SpoVT-AbrB domain CFM90_01035 IPR003444 Transcriptional regulator MraZ CFM90_01035 IPR037914 SpoVT-AbrB domain superfamily CFM90_01040 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CFM90_01040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_01040 IPR002903 Ribosomal RNA small subunit methyltransferase H CFM90_01050 IPR001460 Penicillin-binding protein, transpeptidase CFM90_01050 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CFM90_01050 IPR005311 Penicillin-binding protein, dimerisation domain CFM90_01050 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CFM90_01050 IPR012338 Beta-lactamase/transpeptidase-like CFM90_01055 IPR035911 MurE/MurF, N-terminal CFM90_01055 IPR013221 Mur ligase, central CFM90_01055 IPR036615 Mur ligase, C-terminal domain superfamily CFM90_01055 IPR004101 Mur ligase, C-terminal CFM90_01055 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CFM90_01055 IPR036565 Mur-like, catalytic domain superfamily CFM90_01060 IPR036615 Mur ligase, C-terminal domain superfamily CFM90_01060 IPR000713 Mur ligase, N-terminal catalytic domain CFM90_01060 IPR013221 Mur ligase, central CFM90_01060 IPR004101 Mur ligase, C-terminal CFM90_01060 IPR036565 Mur-like, catalytic domain superfamily CFM90_01060 IPR035911 MurE/MurF, N-terminal CFM90_01060 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CFM90_01065 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CFM90_01065 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CFM90_01065 IPR000715 Glycosyl transferase, family 4 CFM90_01070 IPR013221 Mur ligase, central CFM90_01070 IPR036615 Mur ligase, C-terminal domain superfamily CFM90_01070 IPR004101 Mur ligase, C-terminal CFM90_01070 IPR036565 Mur-like, catalytic domain superfamily CFM90_01070 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CFM90_01075 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CFM90_01075 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CFM90_01080 IPR007235 Glycosyl transferase, family 28, C-terminal CFM90_01080 IPR006009 N-acetylglucosaminyltransferase, MurG CFM90_01080 IPR004276 Glycosyltransferase family 28, N-terminal domain CFM90_01085 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CFM90_01085 IPR036615 Mur ligase, C-terminal domain superfamily CFM90_01085 IPR013221 Mur ligase, central CFM90_01085 IPR004101 Mur ligase, C-terminal CFM90_01085 IPR036565 Mur-like, catalytic domain superfamily CFM90_01085 IPR000713 Mur ligase, N-terminal catalytic domain CFM90_01090 IPR011095 D-alanine--D-alanine ligase, C-terminal CFM90_01090 IPR016185 Pre-ATP-grasp domain superfamily CFM90_01090 IPR011761 ATP-grasp fold CFM90_01090 IPR005905 D-alanine--D-alanine ligase CFM90_01090 IPR013815 ATP-grasp fold, subdomain 1 CFM90_01090 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CFM90_01090 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CFM90_01095 IPR013685 POTRA domain, FtsQ-type CFM90_01095 IPR034746 POTRA domain CFM90_01095 IPR026579 Cell division protein FtsQ CFM90_01095 IPR005548 Cell division protein FtsQ/DivIB CFM90_01100 IPR020823 Cell division protein FtsA CFM90_01100 IPR003494 SHS2 domain inserted in FtsA CFM90_01105 IPR003008 Tubulin/FtsZ, GTPase domain CFM90_01105 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CFM90_01105 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CFM90_01105 IPR020805 Cell division protein FtsZ, conserved site CFM90_01105 IPR008280 Tubulin/FtsZ, C-terminal CFM90_01105 IPR000158 Cell division protein FtsZ CFM90_01105 IPR024757 Cell division protein FtsZ, C-terminal CFM90_01110 IPR037944 Peroxiredoxin-5-like CFM90_01110 IPR013740 Redoxin CFM90_01110 IPR013766 Thioredoxin domain CFM90_01110 IPR036249 Thioredoxin-like superfamily CFM90_01115 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_01115 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CFM90_01115 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CFM90_01115 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CFM90_01125 IPR011055 Duplicated hybrid motif CFM90_01125 IPR013731 Opacity-associated protein A, N-terminal CFM90_01125 IPR018392 LysM domain CFM90_01125 IPR016047 Peptidase M23 CFM90_01130 IPR020937 SecA conserved site CFM90_01130 IPR036670 SecA, preprotein cross-linking domain superfamily CFM90_01130 IPR011130 SecA, preprotein cross-linking domain CFM90_01130 IPR014018 SecA motor DEAD CFM90_01130 IPR036266 SecA, Wing/Scaffold superfamily CFM90_01130 IPR000185 Protein translocase subunit SecA CFM90_01130 IPR011115 SecA DEAD-like, N-terminal CFM90_01130 IPR011116 SecA Wing/Scaffold CFM90_01130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01130 IPR004027 SEC-C motif CFM90_01135 IPR042195 ArgJ beta chain, C-terminal domain CFM90_01135 IPR002813 Arginine biosynthesis protein ArgJ CFM90_01135 IPR016117 ArgJ-like domain superfamily CFM90_01145 IPR015797 NUDIX hydrolase-like domain superfamily CFM90_01145 IPR020476 NUDIX hydrolase CFM90_01145 IPR003561 Mutator MutT CFM90_01145 IPR000086 NUDIX hydrolase domain CFM90_01145 IPR020084 NUDIX hydrolase, conserved site CFM90_01150 IPR005584 DNA gyrase inhibitor YacG CFM90_01150 IPR013088 Zinc finger, NHR/GATA-type CFM90_01155 IPR009777 Cell division protein ZapD CFM90_01155 IPR027462 Z ring-associated protein D, C-terminal CFM90_01155 IPR036268 ZapD domain superfamily CFM90_01160 IPR001977 Dephospho-CoA kinase CFM90_01160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01165 IPR010627 Peptidase A24A, N-terminal CFM90_01165 IPR000045 Prepilin type IV endopeptidase, peptidase domain CFM90_01165 IPR014032 Peptidase A24A, prepilin type IV, bacterial CFM90_01170 IPR018076 Type II secretion system F domain CFM90_01170 IPR001992 Type II secretion system conserved site CFM90_01170 IPR042094 Type II secretion system F domain superfamily CFM90_01170 IPR003004 GspF/PilC family CFM90_01175 IPR003593 AAA+ ATPase domain CFM90_01175 IPR007831 General secretory system II, protein E, N-terminal CFM90_01175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01175 IPR037257 General secretory system II, protein E, N-terminal superfamily CFM90_01175 IPR001482 Type II/IV secretion system protein CFM90_01175 IPR013374 ATPase, type IV, pilus assembly, PilB CFM90_01180 IPR005170 Transporter-associated domain CFM90_01180 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_01180 IPR002550 CNNM, transmembrane domain CFM90_01180 IPR000644 CBS domain CFM90_01180 IPR016169 FAD-binding, type PCMH, subdomain 2 CFM90_01190 IPR033749 Polyprenyl synthetase, conserved site CFM90_01190 IPR008949 Isoprenoid synthase domain superfamily CFM90_01190 IPR000092 Polyprenyl synthetase CFM90_01195 IPR001787 Ribosomal protein L21 CFM90_01195 IPR018258 Ribosomal protein L21, conserved site CFM90_01195 IPR036164 L21-like superfamily CFM90_01195 IPR028909 Ribosomal protein L21-like CFM90_01200 IPR001684 Ribosomal protein L27 CFM90_01200 IPR018261 Ribosomal protein L27, conserved site CFM90_01205 IPR035101 GTP-binding protein, Obg-type CFM90_01205 IPR014100 GTP-binding protein Obg/CgtA CFM90_01205 IPR006074 GTP1/OBG, conserved site CFM90_01205 IPR006169 GTP1/OBG domain CFM90_01205 IPR036726 GTP1/OBG domain superfamily CFM90_01205 IPR006073 GTP binding domain CFM90_01205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01205 IPR031167 OBG-type guanine nucleotide-binding (G) domain CFM90_01210 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CFM90_01210 IPR011529 Glutamate 5-kinase CFM90_01210 IPR036974 PUA domain superfamily CFM90_01210 IPR041739 Glutamate-5-kinase domain CFM90_01210 IPR001057 Glutamate/acetylglutamate kinase CFM90_01210 IPR019797 Glutamate 5-kinase, conserved site CFM90_01210 IPR002478 PUA domain CFM90_01210 IPR015947 PUA-like superfamily CFM90_01210 IPR036393 Acetylglutamate kinase-like superfamily CFM90_01210 IPR001048 Aspartate/glutamate/uridylate kinase CFM90_01220 IPR020476 NUDIX hydrolase CFM90_01220 IPR015797 NUDIX hydrolase-like domain superfamily CFM90_01220 IPR020084 NUDIX hydrolase, conserved site CFM90_01220 IPR000086 NUDIX hydrolase domain CFM90_01220 IPR022927 RNA pyrophosphohydrolase RppH CFM90_01225 IPR033730 Prokaryote proline-tRNA ligase core domain CFM90_01225 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CFM90_01225 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CFM90_01225 IPR002316 Proline-tRNA ligase, class IIa CFM90_01225 IPR036621 Anticodon-binding domain superfamily CFM90_01225 IPR004154 Anticodon-binding CFM90_01225 IPR006195 Aminoacyl-tRNA synthetase, class II CFM90_01225 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CFM90_01225 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CFM90_01225 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CFM90_01230 IPR008258 Transglycosylase SLT domain 1 CFM90_01230 IPR023346 Lysozyme-like domain superfamily CFM90_01230 IPR000189 Prokaryotic transglycosylase, active site CFM90_01240 IPR002771 Multiple antibiotic resistance (MarC)-related CFM90_01250 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CFM90_01250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01250 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CFM90_01250 IPR013822 Signal recognition particle SRP54, helical bundle CFM90_01250 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CFM90_01250 IPR004780 Signal recognition particle protein CFM90_01250 IPR022941 Signal recognition particle, SRP54 subunit CFM90_01250 IPR003593 AAA+ ATPase domain CFM90_01250 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CFM90_01265 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_01265 IPR000014 PAS domain CFM90_01265 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_01265 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_01265 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_01265 IPR005467 Histidine kinase domain CFM90_01265 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_01270 IPR011006 CheY-like superfamily CFM90_01270 IPR002197 DNA binding HTH domain, Fis-type CFM90_01270 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_01270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01270 IPR025944 Sigma-54 interaction domain, conserved site CFM90_01270 IPR003593 AAA+ ATPase domain CFM90_01270 IPR001789 Signal transduction response regulator, receiver domain CFM90_01270 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_01270 IPR009057 Homeobox-like domain superfamily CFM90_01270 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_01275 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CFM90_01275 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CFM90_01280 IPR000788 Ribonucleotide reductase large subunit, C-terminal CFM90_01280 IPR013509 Ribonucleotide reductase large subunit, N-terminal CFM90_01280 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CFM90_01280 IPR039718 Ribonucleoside-diphosphate reductase large subunit CFM90_01280 IPR005144 ATP-cone domain CFM90_01280 IPR013346 Ribonucleotide reductase, class I , alpha subunit CFM90_01285 IPR033909 Ribonucleotide reductase small subunit CFM90_01285 IPR000358 Ribonucleotide reductase small subunit family CFM90_01285 IPR009078 Ferritin-like superfamily CFM90_01285 IPR012348 Ribonucleotide reductase-like CFM90_01295 IPR000620 EamA domain CFM90_01300 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_01300 IPR011008 Dimeric alpha-beta barrel CFM90_01300 IPR019888 Transcription regulator AsnC-type CFM90_01300 IPR036390 Winged helix DNA-binding domain superfamily CFM90_01300 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_01300 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_01300 IPR000485 AsnC-type HTH domain CFM90_01310 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_01310 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_01310 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_01310 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_01310 IPR004090 Chemotaxis methyl-accepting receptor CFM90_01310 IPR003660 HAMP domain CFM90_01355 IPR029056 Ribokinase-like CFM90_01355 IPR011611 Carbohydrate kinase PfkB CFM90_01355 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CFM90_01360 IPR002065 Thiol peroxidase Tpx CFM90_01360 IPR018219 Thiol peroxidase conserved site CFM90_01360 IPR036249 Thioredoxin-like superfamily CFM90_01360 IPR013740 Redoxin CFM90_01360 IPR013766 Thioredoxin domain CFM90_01370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_01370 IPR004498 Ribosomal protein L11 methyltransferase CFM90_01375 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CFM90_01375 IPR005481 Biotin carboxylase-like, N-terminal domain CFM90_01375 IPR013815 ATP-grasp fold, subdomain 1 CFM90_01375 IPR005482 Biotin carboxylase, C-terminal CFM90_01375 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CFM90_01375 IPR016185 Pre-ATP-grasp domain superfamily CFM90_01375 IPR011761 ATP-grasp fold CFM90_01375 IPR011054 Rudiment single hybrid motif CFM90_01375 IPR011764 Biotin carboxylation domain CFM90_01380 IPR001249 Acetyl-CoA biotin carboxyl carrier CFM90_01380 IPR001882 Biotin-binding site CFM90_01380 IPR011053 Single hybrid motif CFM90_01380 IPR000089 Biotin/lipoyl attachment CFM90_01385 IPR018509 Dehydroquinase, class II, conserved site CFM90_01385 IPR036441 Dehydroquinase, class II superfamily CFM90_01385 IPR001874 Dehydroquinase, class II CFM90_01390 IPR017937 Thioredoxin, conserved site CFM90_01390 IPR013766 Thioredoxin domain CFM90_01390 IPR036249 Thioredoxin-like superfamily CFM90_01390 IPR005746 Thioredoxin CFM90_01400 IPR036565 Mur-like, catalytic domain superfamily CFM90_01400 IPR036615 Mur ligase, C-terminal domain superfamily CFM90_01400 IPR013221 Mur ligase, central CFM90_01400 IPR000713 Mur ligase, N-terminal catalytic domain CFM90_01400 IPR005757 Murein peptide ligase CFM90_01400 IPR004101 Mur ligase, C-terminal CFM90_01405 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CFM90_01405 IPR029058 Alpha/Beta hydrolase fold CFM90_01410 IPR007440 Chorismate--pyruvate lyase CFM90_01410 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CFM90_01415 IPR012340 Nucleic acid-binding, OB-fold CFM90_01415 IPR001900 Ribonuclease II/R CFM90_01425 IPR036291 NAD(P)-binding domain superfamily CFM90_01425 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CFM90_01425 IPR041121 SDH, C-terminal CFM90_01425 IPR022893 Shikimate dehydrogenase family CFM90_01425 IPR011342 Shikimate dehydrogenase CFM90_01425 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CFM90_01430 IPR023346 Lysozyme-like domain superfamily CFM90_01430 IPR036950 Penicillin binding protein transglycosylase domain CFM90_01430 IPR011812 Biosynthetic peptidoglycan transglycosylase CFM90_01430 IPR001264 Glycosyl transferase, family 51 CFM90_01440 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CFM90_01440 IPR004488 Magnesium/cobalt transport protein CorA CFM90_01445 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CFM90_01445 IPR001754 Orotidine 5'-phosphate decarboxylase domain CFM90_01445 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 CFM90_01445 IPR013785 Aldolase-type TIM barrel CFM90_01445 IPR011060 Ribulose-phosphate binding barrel CFM90_01455 IPR036653 CinA-like, C-terminal CFM90_01455 IPR041424 CinA, KH domain CFM90_01455 IPR008136 CinA, C-terminal CFM90_01455 IPR008135 Competence-induced protein CinA CFM90_01455 IPR036425 MoaB/Mog-like domain superfamily CFM90_01455 IPR001453 MoaB/Mog domain CFM90_01460 IPR026037 Phosphatidylglycerophosphatase A CFM90_01460 IPR007686 YutG/PgpA domain CFM90_01460 IPR036681 PgpA-like superfamily CFM90_01465 IPR036921 PurM-like, N-terminal domain superfamily CFM90_01465 IPR036676 PurM-like, C-terminal domain superfamily CFM90_01465 IPR010918 PurM-like, C-terminal domain CFM90_01465 IPR016188 PurM-like, N-terminal domain CFM90_01465 IPR006283 Thiamine-monophosphate kinase CFM90_01470 IPR012302 Malic enzyme, NAD-binding CFM90_01470 IPR037062 Malic enzyme, N-terminal domain superfamily CFM90_01470 IPR042113 Phosphate acetyltransferase, domain 1 CFM90_01470 IPR036291 NAD(P)-binding domain superfamily CFM90_01470 IPR042112 Phosphate acetyltransferase, domain 2 CFM90_01470 IPR002505 Phosphate acetyl/butaryl transferase CFM90_01470 IPR012301 Malic enzyme, N-terminal domain CFM90_01470 IPR015884 Malic enzyme, conserved site CFM90_01470 IPR012188 NAD(P)-dependent malic enzyme CFM90_01490 IPR029028 Alpha/beta knot methyltransferases CFM90_01490 IPR015947 PUA-like superfamily CFM90_01490 IPR006700 Ribosomal RNA small subunit methyltransferase E CFM90_01490 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFM90_01500 IPR036390 Winged helix DNA-binding domain superfamily CFM90_01500 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_01500 IPR005119 LysR, substrate-binding CFM90_01500 IPR000847 Transcription regulator HTH, LysR CFM90_01505 IPR002299 Porin, Neisseria sp. type CFM90_01505 IPR001702 Porin, Gram-negative type CFM90_01505 IPR023614 Porin domain superfamily CFM90_01505 IPR033900 Porin domain, Gram-negative type CFM90_01515 IPR001761 Periplasmic binding protein/LacI sugar binding domain CFM90_01515 IPR026266 L-arabinose-binding periplasmic protein CFM90_01515 IPR028082 Periplasmic binding protein-like I CFM90_01520 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG CFM90_01520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01520 IPR003439 ABC transporter-like CFM90_01520 IPR003593 AAA+ ATPase domain CFM90_01520 IPR017871 ABC transporter, conserved site CFM90_01530 IPR002559 Transposase, IS4-like CFM90_01530 IPR008490 Transposase InsH, N-terminal CFM90_01540 IPR011042 Six-bladed beta-propeller, TolB-like CFM90_01540 IPR005511 Senescence marker protein-30 (SMP-30) CFM90_01540 IPR013658 SMP-30/Gluconolactonase/LRE-like region CFM90_01550 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_01550 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_01550 IPR036291 NAD(P)-binding domain superfamily CFM90_01555 IPR000887 KDPG/KHG aldolase CFM90_01555 IPR013785 Aldolase-type TIM barrel CFM90_01560 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CFM90_01560 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CFM90_01560 IPR036849 Enolase-like, C-terminal domain superfamily CFM90_01560 IPR034593 Mandelate racemase-like CFM90_01560 IPR029065 Enolase C-terminal domain-like CFM90_01560 IPR023592 D-galactonate dehydratase CFM90_01560 IPR029017 Enolase-like, N-terminal CFM90_01560 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CFM90_01565 IPR029061 Thiamin diphosphate-binding fold CFM90_01565 IPR033248 Transketolase, C-terminal domain CFM90_01565 IPR005474 Transketolase, N-terminal CFM90_01565 IPR033247 Transketolase family CFM90_01565 IPR020826 Transketolase binding site CFM90_01565 IPR005478 Transketolase, bacterial-like CFM90_01565 IPR005475 Transketolase-like, pyrimidine-binding domain CFM90_01565 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CFM90_01570 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CFM90_01570 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CFM90_01570 IPR036291 NAD(P)-binding domain superfamily CFM90_01570 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CFM90_01570 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CFM90_01570 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CFM90_01575 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_01575 IPR005119 LysR, substrate-binding CFM90_01575 IPR036390 Winged helix DNA-binding domain superfamily CFM90_01575 IPR000847 Transcription regulator HTH, LysR CFM90_01580 IPR002481 Ferric-uptake regulator CFM90_01580 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_01580 IPR036390 Winged helix DNA-binding domain superfamily CFM90_01585 IPR026592 Outer membrane protein assembly factor BamE CFM90_01585 IPR007450 Lipoprotein SmpA/OmlA CFM90_01585 IPR037873 BamE-like CFM90_01590 IPR022663 Dihydrodipicolinate reductase, C-terminal CFM90_01590 IPR000846 Dihydrodipicolinate reductase, N-terminal CFM90_01590 IPR022664 Dihydrodipicolinate reductase, conserved site CFM90_01590 IPR023940 Dihydrodipicolinate reductase CFM90_01590 IPR036291 NAD(P)-binding domain superfamily CFM90_01595 IPR025709 Leucyl-tRNA synthetase, editing domain CFM90_01595 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CFM90_01595 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFM90_01595 IPR015413 Methionyl/Leucyl tRNA synthetase CFM90_01595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_01595 IPR002300 Aminoacyl-tRNA synthetase, class Ia CFM90_01595 IPR002302 Leucine-tRNA ligase CFM90_01595 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFM90_01595 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CFM90_01605 IPR005790 DNA polymerase III, delta subunit CFM90_01605 IPR010372 DNA polymerase III delta, N-terminal CFM90_01605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01605 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CFM90_01605 IPR032780 DNA polymerase III subunit delta, C-terminal CFM90_01610 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_01610 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_01610 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_01610 IPR015590 Aldehyde dehydrogenase domain CFM90_01610 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CFM90_01610 IPR012134 Glutamate-5-semialdehyde dehydrogenase CFM90_01610 IPR000965 GPR domain CFM90_01620 IPR004114 THUMP domain CFM90_01620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_01620 IPR000241 Putative RNA methylase domain CFM90_01620 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFM90_01625 IPR003593 AAA+ ATPase domain CFM90_01625 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_01625 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_01625 IPR001789 Signal transduction response regulator, receiver domain CFM90_01625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01625 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_01625 IPR025944 Sigma-54 interaction domain, conserved site CFM90_01625 IPR011006 CheY-like superfamily CFM90_01625 IPR009057 Homeobox-like domain superfamily CFM90_01625 IPR002197 DNA binding HTH domain, Fis-type CFM90_01630 IPR000700 PAS-associated, C-terminal CFM90_01630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_01630 IPR035965 PAS domain superfamily CFM90_01630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_01630 IPR013767 PAS fold CFM90_01630 IPR005467 Histidine kinase domain CFM90_01630 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_01630 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_01630 IPR000014 PAS domain CFM90_01630 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_01635 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_01635 IPR029151 Periplasmic sensor-like domain superfamily CFM90_01635 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_01635 IPR005467 Histidine kinase domain CFM90_01635 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_01635 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_01635 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_01645 IPR011006 CheY-like superfamily CFM90_01645 IPR001789 Signal transduction response regulator, receiver domain CFM90_01645 IPR003607 HD/PDEase domain CFM90_01645 IPR037522 HD-GYP domain CFM90_01650 IPR034300 NADP transhydrogenase beta-like domain CFM90_01650 IPR012136 NADP transhydrogenase, beta subunit CFM90_01650 IPR029035 DHS-like NAD/FAD-binding domain superfamily CFM90_01655 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CFM90_01660 IPR009010 Aspartate decarboxylase-like domain superfamily CFM90_01660 IPR003190 Aspartate decarboxylase CFM90_01665 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CFM90_01665 IPR036291 NAD(P)-binding domain superfamily CFM90_01665 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CFM90_01665 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CFM90_01665 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CFM90_01670 IPR012910 TonB-dependent receptor, plug domain CFM90_01670 IPR010105 TonB-dependent siderophore receptor CFM90_01670 IPR000531 TonB-dependent receptor-like, beta-barrel CFM90_01670 IPR037066 TonB-dependent receptor, plug domain superfamily CFM90_01670 IPR039423 TonB-dependent receptor-like CFM90_01670 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFM90_01685 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CFM90_01695 IPR015797 NUDIX hydrolase-like domain superfamily CFM90_01695 IPR020084 NUDIX hydrolase, conserved site CFM90_01695 IPR033713 Phosphatase NudJ CFM90_01695 IPR000086 NUDIX hydrolase domain CFM90_01695 IPR020476 NUDIX hydrolase CFM90_01700 IPR023382 Adenine nucleotide alpha hydrolase-like domains CFM90_01700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_01700 IPR004506 tRNA-specific 2-thiouridylase CFM90_01705 IPR002932 Glutamate synthase domain CFM90_01705 IPR013785 Aldolase-type TIM barrel CFM90_01705 IPR024188 Glutamate synthase large subunit-like protein CFM90_01705 IPR027283 Glutamate synthase large subunit-like protein, bacteria CFM90_01710 IPR036249 Thioredoxin-like superfamily CFM90_01710 IPR004046 Glutathione S-transferase, C-terminal CFM90_01710 IPR004045 Glutathione S-transferase, N-terminal CFM90_01710 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_01710 IPR034343 Uncharacterized GST-like protein YibF CFM90_01710 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_01715 IPR020557 Fumarate lyase, conserved site CFM90_01715 IPR013539 Adenylosuccinate lyase PurB, C-terminal CFM90_01715 IPR024083 Fumarase/histidase, N-terminal CFM90_01715 IPR000362 Fumarate lyase family CFM90_01715 IPR008948 L-Aspartase-like CFM90_01715 IPR022761 Fumarate lyase, N-terminal CFM90_01715 IPR004769 Adenylosuccinate lyase CFM90_01720 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CFM90_01720 IPR016174 Di-haem cytochrome, transmembrane CFM90_01725 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CFM90_01725 IPR023480 Uncharacterised protein family UPF0312/YceI CFM90_01725 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CFM90_01730 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CFM90_01730 IPR023480 Uncharacterised protein family UPF0312/YceI CFM90_01730 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CFM90_01735 IPR005665 Protein-export membrane protein SecF, bacterial CFM90_01735 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CFM90_01735 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CFM90_01735 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CFM90_01740 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CFM90_01740 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CFM90_01740 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CFM90_01740 IPR001036 Acriflavin resistance protein CFM90_01740 IPR005791 Protein translocase subunit SecD CFM90_01740 IPR027398 SecD export protein N-terminal TM domain CFM90_01745 IPR003849 Preprotein translocase YajC CFM90_01750 IPR004803 tRNA-guanine transglycosylase CFM90_01750 IPR036511 Queuine tRNA-ribosyltransferase-like CFM90_01750 IPR002616 tRNA-guanine(15) transglycosylase-like CFM90_01755 IPR042119 QueA, domain 2 CFM90_01755 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CFM90_01755 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CFM90_01755 IPR042118 QueA, domain 1 CFM90_01760 IPR011545 DEAD/DEAH box helicase domain CFM90_01760 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_01760 IPR012340 Nucleic acid-binding, OB-fold CFM90_01760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01760 IPR033454 RecG, wedge domain CFM90_01760 IPR004609 ATP-dependent DNA helicase RecG CFM90_01760 IPR001650 Helicase, C-terminal CFM90_01780 IPR001608 Alanine racemase, N-terminal CFM90_01780 IPR026956 D-serine dehydratase-like domain CFM90_01780 IPR042208 D-serine dehydratase-like domain superfamily CFM90_01780 IPR029066 PLP-binding barrel CFM90_01785 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_01785 IPR005119 LysR, substrate-binding CFM90_01785 IPR000847 Transcription regulator HTH, LysR CFM90_01785 IPR036390 Winged helix DNA-binding domain superfamily CFM90_01790 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_01790 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_01790 IPR005858 Cysteine synthase CysM CFM90_01790 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CFM90_01795 IPR011650 Peptidase M20, dimerisation domain CFM90_01795 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_01795 IPR002933 Peptidase M20 CFM90_01795 IPR010158 Amidase, carbamoylase-type CFM90_01800 IPR011991 ArsR-like helix-turn-helix domain CFM90_01800 IPR000485 AsnC-type HTH domain CFM90_01800 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_01800 IPR036390 Winged helix DNA-binding domain superfamily CFM90_01800 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_01800 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_01800 IPR019888 Transcription regulator AsnC-type CFM90_01800 IPR011008 Dimeric alpha-beta barrel CFM90_01805 IPR017439 Amidohydrolase CFM90_01805 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_01805 IPR002933 Peptidase M20 CFM90_01805 IPR011650 Peptidase M20, dimerisation domain CFM90_01810 IPR007235 Glycosyl transferase, family 28, C-terminal CFM90_01810 IPR006326 UDP-glycosyltransferase, MGT CFM90_01825 IPR008490 Transposase InsH, N-terminal CFM90_01825 IPR002559 Transposase, IS4-like CFM90_01860 IPR019844 Cold-shock (CSD) domain CFM90_01860 IPR011129 Cold shock domain CFM90_01860 IPR012340 Nucleic acid-binding, OB-fold CFM90_01860 IPR002059 Cold-shock protein, DNA-binding CFM90_01860 IPR012156 Cold shock, CspA CFM90_01865 IPR024473 Transposase, IS4, N-terminal CFM90_01865 IPR002559 Transposase, IS4-like CFM90_01865 IPR012337 Ribonuclease H-like superfamily CFM90_01940 IPR005119 LysR, substrate-binding CFM90_01940 IPR000847 Transcription regulator HTH, LysR CFM90_01940 IPR036390 Winged helix DNA-binding domain superfamily CFM90_01940 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_01955 IPR023188 DNA-binding protein Dps, conserved site CFM90_01955 IPR002177 DNA-binding protein Dps CFM90_01955 IPR012347 Ferritin-like CFM90_01955 IPR009078 Ferritin-like superfamily CFM90_01955 IPR008331 Ferritin/DPS protein domain CFM90_01960 IPR006370 4-hydroxybenzoate polyprenyltransferase-like CFM90_01960 IPR030470 UbiA prenyltransferase conserved site CFM90_01960 IPR000537 UbiA prenyltransferase family CFM90_01960 IPR039653 Prenyltransferase CFM90_01970 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_01970 IPR036291 NAD(P)-binding domain superfamily CFM90_01970 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CFM90_01970 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CFM90_01970 IPR000304 Pyrroline-5-carboxylate reductase CFM90_01975 IPR001608 Alanine racemase, N-terminal CFM90_01975 IPR029066 PLP-binding barrel CFM90_01975 IPR011078 Pyridoxal phosphate homeostasis protein CFM90_01980 IPR003593 AAA+ ATPase domain CFM90_01980 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01980 IPR006321 Pilus retraction protein PilT CFM90_01980 IPR001482 Type II/IV secretion system protein CFM90_01985 IPR001482 Type II/IV secretion system protein CFM90_01985 IPR003593 AAA+ ATPase domain CFM90_01985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_01985 IPR006321 Pilus retraction protein PilT CFM90_02020 IPR036249 Thioredoxin-like superfamily CFM90_02020 IPR029760 Glutathione peroxidase conserved site CFM90_02020 IPR029759 Glutathione peroxidase active site CFM90_02020 IPR000889 Glutathione peroxidase CFM90_02030 IPR014710 RmlC-like jelly roll fold CFM90_02030 IPR011051 RmlC-like cupin domain superfamily CFM90_02030 IPR013096 Cupin 2, conserved barrel CFM90_02030 IPR016672 Polyketide biosynthesis protein CurC, predicted CFM90_02040 IPR007300 CidB/LrgB family CFM90_02040 IPR005261 Conserved hypothetical protein CHP00659 CFM90_02045 IPR022957 Uncharacterised protein family UPF0299 CFM90_02045 IPR005538 LrgA/CidA family CFM90_02050 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_02050 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_02050 IPR004017 Cysteine-rich domain CFM90_02050 IPR009051 Alpha-helical ferredoxin CFM90_02050 IPR012257 Glycolate oxidase, iron-sulphur subunit CFM90_02055 IPR016166 FAD-binding domain, PCMH-type CFM90_02055 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_02055 IPR016169 FAD-binding, type PCMH, subdomain 2 CFM90_02055 IPR016164 FAD-linked oxidase-like, C-terminal CFM90_02055 IPR006094 FAD linked oxidase, N-terminal CFM90_02060 IPR004113 FAD-linked oxidase, C-terminal CFM90_02060 IPR016164 FAD-linked oxidase-like, C-terminal CFM90_02060 IPR004490 Glycolate oxidase subunit GlcD CFM90_02060 IPR016166 FAD-binding domain, PCMH-type CFM90_02060 IPR006094 FAD linked oxidase, N-terminal CFM90_02060 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CFM90_02060 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_02065 IPR005119 LysR, substrate-binding CFM90_02065 IPR000847 Transcription regulator HTH, LysR CFM90_02065 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02065 IPR036390 Winged helix DNA-binding domain superfamily CFM90_02070 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_02070 IPR016166 FAD-binding domain, PCMH-type CFM90_02070 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CFM90_02070 IPR006094 FAD linked oxidase, N-terminal CFM90_02070 IPR016164 FAD-linked oxidase-like, C-terminal CFM90_02070 IPR004113 FAD-linked oxidase, C-terminal CFM90_02070 IPR004490 Glycolate oxidase subunit GlcD CFM90_02075 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type CFM90_02075 IPR036451 Cobalamin adenosyltransferase-like superfamily CFM90_02075 IPR016030 Cobalamin adenosyltransferase-like CFM90_02080 IPR010920 LSM domain superfamily CFM90_02080 IPR008910 Conserved TM helix CFM90_02080 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CFM90_02080 IPR006686 Mechanosensitive ion channel MscS, conserved site CFM90_02080 IPR011066 Mechanosensitive ion channel MscS, C-terminal CFM90_02080 IPR023408 Mechanosensitive ion channel MscS domain superfamily CFM90_02080 IPR006685 Mechanosensitive ion channel MscS CFM90_02090 IPR013785 Aldolase-type TIM barrel CFM90_02090 IPR006219 DHAP synthase, class 1 CFM90_02090 IPR006218 DAHP synthetase I/KDSA CFM90_02095 IPR036059 Metalloprotease TldD/PmbA superfamily CFM90_02095 IPR002510 Metalloprotease TldD/PmbA CFM90_02095 IPR035068 Metalloprotease TldD/PmbA, N-terminal CFM90_02095 IPR025502 TldD CFM90_02100 IPR036526 Carbon-nitrogen hydrolase superfamily CFM90_02100 IPR001110 Uncharacterised protein family UPF0012, conserved site CFM90_02100 IPR003010 Carbon-nitrogen hydrolase CFM90_02110 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme CFM90_02110 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CFM90_02110 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CFM90_02120 IPR023827 Peptidase S8, subtilisin, Asp-active site CFM90_02120 IPR022398 Peptidase S8, subtilisin, His-active site CFM90_02120 IPR023828 Peptidase S8, subtilisin, Ser-active site CFM90_02120 IPR015500 Peptidase S8, subtilisin-related CFM90_02120 IPR034176 Peptidase MprA-like catalytic domain CFM90_02120 IPR000209 Peptidase S8/S53 domain CFM90_02120 IPR036852 Peptidase S8/S53 domain superfamily CFM90_02120 IPR002884 P domain CFM90_02125 IPR015500 Peptidase S8, subtilisin-related CFM90_02125 IPR034176 Peptidase MprA-like catalytic domain CFM90_02125 IPR023827 Peptidase S8, subtilisin, Asp-active site CFM90_02125 IPR023828 Peptidase S8, subtilisin, Ser-active site CFM90_02125 IPR000209 Peptidase S8/S53 domain CFM90_02125 IPR036852 Peptidase S8/S53 domain superfamily CFM90_02125 IPR022398 Peptidase S8, subtilisin, His-active site CFM90_02125 IPR007280 Peptidase, C-terminal, archaeal/bacterial CFM90_02135 IPR003395 RecF/RecN/SMC, N-terminal CFM90_02135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02135 IPR004604 DNA recombination/repair protein RecN CFM90_02140 IPR002504 NAD kinase CFM90_02140 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CFM90_02140 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CFM90_02140 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CFM90_02145 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal CFM90_02145 IPR036390 Winged helix DNA-binding domain superfamily CFM90_02145 IPR029016 GAF-like domain superfamily CFM90_02145 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02145 IPR002571 Heat-inducible transcription repressor HrcA CFM90_02145 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily CFM90_02150 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CFM90_02150 IPR010248 Histidine utilization repressor CFM90_02150 IPR036390 Winged helix DNA-binding domain superfamily CFM90_02150 IPR000524 Transcription regulator HTH, GntR CFM90_02150 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02150 IPR011663 UbiC transcription regulator-associated CFM90_02155 IPR035401 Urocanase, C-terminal domain CFM90_02155 IPR036190 Urocanase superfamily CFM90_02155 IPR023637 Urocanase CFM90_02155 IPR023636 Urocanase conserved site CFM90_02155 IPR035400 Urocanase, N-terminal domain CFM90_02155 IPR035085 Urocanase, Rossmann-like domain CFM90_02155 IPR038364 Urocanase, central domain superfamily CFM90_02160 IPR024083 Fumarase/histidase, N-terminal CFM90_02160 IPR022313 Phenylalanine/histidine ammonia-lyases, active site CFM90_02160 IPR008948 L-Aspartase-like CFM90_02160 IPR005921 Histidine ammonia-lyase CFM90_02160 IPR001106 Aromatic amino acid lyase CFM90_02165 IPR023696 Ureohydrolase domain superfamily CFM90_02165 IPR006035 Ureohydrolase CFM90_02165 IPR005923 Formiminoglutamase CFM90_02170 IPR006680 Amidohydrolase-related CFM90_02170 IPR005920 Imidazolonepropionase CFM90_02170 IPR032466 Metal-dependent hydrolase CFM90_02170 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFM90_02175 IPR019772 Ferrochelatase, active site CFM90_02175 IPR033644 Ferrochelatase, C-terminal CFM90_02175 IPR001015 Ferrochelatase CFM90_02175 IPR033659 Ferrochelatase, N-terminal CFM90_02180 IPR002942 RNA-binding S4 domain CFM90_02180 IPR036986 RNA-binding S4 domain superfamily CFM90_02180 IPR025708 Heat shock protein 15 CFM90_02195 IPR000740 GrpE nucleotide exchange factor CFM90_02195 IPR013805 GrpE nucleotide exchange factor, coiled-coil CFM90_02195 IPR009012 GrpE nucleotide exchange factor, head CFM90_02205 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CFM90_02205 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CFM90_02205 IPR023459 Transcription elongation factor GreA/GreB family CFM90_02205 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CFM90_02205 IPR028625 Regulator of nucleoside diphosphate kinase CFM90_02210 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CFM90_02210 IPR013126 Heat shock protein 70 family CFM90_02210 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CFM90_02210 IPR012725 Chaperone DnaK CFM90_02210 IPR018181 Heat shock protein 70, conserved site CFM90_02215 IPR002939 Chaperone DnaJ, C-terminal CFM90_02215 IPR012724 Chaperone DnaJ CFM90_02215 IPR001623 DnaJ domain CFM90_02215 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CFM90_02215 IPR036869 Chaperone J-domain superfamily CFM90_02215 IPR008971 HSP40/DnaJ peptide-binding CFM90_02215 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CFM90_02215 IPR018253 DnaJ domain, conserved site CFM90_02220 IPR017926 Glutamine amidotransferase CFM90_02220 IPR015890 Chorismate-utilising enzyme, C-terminal CFM90_02220 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CFM90_02220 IPR005802 Aminodeoxychorismate synthase, component I CFM90_02220 IPR005801 ADC synthase CFM90_02220 IPR029062 Class I glutamine amidotransferase-like CFM90_02220 IPR006805 Anthranilate synthase component I, N-terminal CFM90_02225 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 CFM90_02225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02225 IPR015856 ABC transporter, CbiO/EcfA subunit CFM90_02225 IPR003439 ABC transporter-like CFM90_02225 IPR017871 ABC transporter, conserved site CFM90_02225 IPR003593 AAA+ ATPase domain CFM90_02230 IPR035906 MetI-like superfamily CFM90_02230 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_02235 IPR003700 Ketopantoate hydroxymethyltransferase CFM90_02235 IPR040442 Pyruvate kinase-like domain superfamily CFM90_02235 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_02245 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CFM90_02245 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CFM90_02250 IPR002646 Poly A polymerase, head domain CFM90_02250 IPR010206 Poly(A) polymerase I CFM90_02250 IPR025866 Polymerase A arginine-rich C-terminal domain CFM90_02250 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CFM90_02260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02260 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae CFM90_02260 IPR017788 DnaA regulatory inactivator Hda CFM90_02260 IPR013317 Chromosomal replication initiator protein DnaA CFM90_02260 IPR020591 Chromosomal replication control, initiator DnaA-like CFM90_02265 IPR002549 Transmembrane protein TqsA-like CFM90_02270 IPR036921 PurM-like, N-terminal domain superfamily CFM90_02270 IPR016188 PurM-like, N-terminal domain CFM90_02270 IPR036676 PurM-like, C-terminal domain superfamily CFM90_02270 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CFM90_02270 IPR010918 PurM-like, C-terminal domain CFM90_02285 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CFM90_02285 IPR018062 HTH domain AraC-type, conserved site CFM90_02285 IPR018060 DNA binding HTH domain, AraC-type CFM90_02285 IPR009057 Homeobox-like domain superfamily CFM90_02285 IPR016221 Bifunctional regulatory protein Ada CFM90_02285 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CFM90_02285 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CFM90_02285 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CFM90_02285 IPR004026 Ada DNA repair, metal-binding CFM90_02285 IPR035451 Ada-like domain superfamily CFM90_02285 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02285 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CFM90_02295 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CFM90_02295 IPR005123 Oxoglutarate/iron-dependent dioxygenase CFM90_02295 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily CFM90_02295 IPR004574 Alkylated DNA repair protein AlkB CFM90_02300 IPR018655 Protein of unknown function DUF2086 CFM90_02305 IPR009057 Homeobox-like domain superfamily CFM90_02305 IPR016221 Bifunctional regulatory protein Ada CFM90_02305 IPR018062 HTH domain AraC-type, conserved site CFM90_02305 IPR004026 Ada DNA repair, metal-binding CFM90_02305 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CFM90_02305 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CFM90_02305 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02305 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CFM90_02305 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CFM90_02305 IPR035451 Ada-like domain superfamily CFM90_02305 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CFM90_02305 IPR018060 DNA binding HTH domain, AraC-type CFM90_02310 IPR016181 Acyl-CoA N-acyltransferase CFM90_02310 IPR012772 L-2,4-diaminobutyric acid acetyltransferase CFM90_02310 IPR000182 GNAT domain CFM90_02315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02315 IPR039657 Dimethylallyltransferase CFM90_02315 IPR018022 IPP transferase CFM90_02320 IPR002099 DNA mismatch repair protein family, N-terminal CFM90_02320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_02320 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_02320 IPR014790 MutL, C-terminal, dimerisation CFM90_02320 IPR042121 MutL, C-terminal domain, regulatory subdomain CFM90_02320 IPR042120 MutL, C-terminal domain, dimerisation subdomain CFM90_02320 IPR014762 DNA mismatch repair, conserved site CFM90_02320 IPR020667 DNA mismatch repair protein, MutL CFM90_02320 IPR037198 MutL, C-terminal domain superfamily CFM90_02320 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CFM90_02320 IPR013507 DNA mismatch repair protein, S5 domain 2-like CFM90_02320 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_02325 IPR003399 Mce/MlaD CFM90_02340 IPR032816 SNARE associated Golgi protein CFM90_02340 IPR032818 DedA family CFM90_02345 IPR032698 Protein SirB1, N-terminal CFM90_02345 IPR019734 Tetratricopeptide repeat CFM90_02345 IPR011990 Tetratricopeptide-like helical domain superfamily CFM90_02345 IPR013026 Tetratricopeptide repeat-containing domain CFM90_02350 IPR004268 Peptidoglycan biosynthesis protein MurJ CFM90_02355 IPR036510 Ribosomal protein S20 superfamily CFM90_02355 IPR002583 Ribosomal protein S20 CFM90_02365 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CFM90_02365 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CFM90_02365 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CFM90_02365 IPR024904 Ornithine carbamoyltransferase CFM90_02365 IPR002292 Ornithine/putrescine carbamoyltransferase CFM90_02365 IPR006130 Aspartate/ornithine carbamoyltransferase CFM90_02375 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CFM90_02375 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail CFM90_02375 IPR023437 Argininosuccinate synthase, type 2 subfamily CFM90_02375 IPR001518 Argininosuccinate synthase CFM90_02375 IPR018223 Argininosuccinate synthase, conserved site CFM90_02375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_02380 IPR009664 Pyrimidine/purine nucleoside phosphorylase CFM90_02380 IPR014710 RmlC-like jelly roll fold CFM90_02380 IPR011051 RmlC-like cupin domain superfamily CFM90_02390 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CFM90_02390 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CFM90_02390 IPR016169 FAD-binding, type PCMH, subdomain 2 CFM90_02390 IPR016167 FAD-binding, type PCMH, subdomain 1 CFM90_02390 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_02390 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CFM90_02390 IPR006094 FAD linked oxidase, N-terminal CFM90_02390 IPR016166 FAD-binding domain, PCMH-type CFM90_02395 IPR007551 Protein of unknown function DUF520 CFM90_02395 IPR035571 UPF0234-like, C-terminal CFM90_02395 IPR035570 UPF0234, N-terminal CFM90_02395 IPR036183 YajQ-like superfamily CFM90_02400 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site CFM90_02400 IPR036452 Ribonucleoside hydrolase-like CFM90_02400 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA CFM90_02400 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CFM90_02400 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CFM90_02405 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase CFM90_02405 IPR029055 Nucleophile aminohydrolases, N-terminal CFM90_02405 IPR023343 Penicillin amidase type, domain 1 CFM90_02410 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CFM90_02415 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CFM90_02415 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CFM90_02415 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CFM90_02420 IPR011010 DNA breaking-rejoining enzyme, catalytic core CFM90_02420 IPR002104 Integrase, catalytic domain CFM90_02420 IPR013762 Integrase-like, catalytic domain superfamily CFM90_02420 IPR010998 Integrase/recombinase, N-terminal CFM90_02420 IPR023009 Tyrosine recombinase XerC/XerD CFM90_02420 IPR011932 Tyrosine recombinase XerD CFM90_02420 IPR004107 Integrase, SAM-like, N-terminal CFM90_02425 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02425 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CFM90_02425 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CFM90_02425 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CFM90_02425 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CFM90_02425 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CFM90_02425 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CFM90_02435 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_02435 IPR004453 Epoxyqueuosine reductase QueG CFM90_02435 IPR013542 Domain of unknown function DUF1730 CFM90_02435 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_02440 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CFM90_02440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02445 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CFM90_02445 IPR021731 AMIN domain CFM90_02445 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_02450 IPR038770 Sodium/solute symporter superfamily CFM90_02450 IPR016833 Putative sodium bile acid cotransporter CFM90_02455 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02455 IPR000847 Transcription regulator HTH, LysR CFM90_02455 IPR005119 LysR, substrate-binding CFM90_02455 IPR036390 Winged helix DNA-binding domain superfamily CFM90_02460 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_02460 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_02460 IPR015590 Aldehyde dehydrogenase domain CFM90_02460 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_02460 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_02460 IPR010061 Methylmalonate-semialdehyde dehydrogenase CFM90_02465 IPR000847 Transcription regulator HTH, LysR CFM90_02465 IPR036390 Winged helix DNA-binding domain superfamily CFM90_02465 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02465 IPR005119 LysR, substrate-binding CFM90_02470 IPR036291 NAD(P)-binding domain superfamily CFM90_02470 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_02470 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_02475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02475 IPR033690 Adenylate kinase, conserved site CFM90_02475 IPR006259 Adenylate kinase subfamily CFM90_02475 IPR000850 Adenylate kinase/UMP-CMP kinase CFM90_02475 IPR007862 Adenylate kinase, active site lid domain CFM90_02480 IPR003329 Acylneuraminate cytidylyltransferase CFM90_02480 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CFM90_02480 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_02485 IPR005651 Trm112-like CFM90_02490 IPR003758 Tetraacyldisaccharide 4'-kinase CFM90_02490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02500 IPR002898 MotA/TolQ/ExbB proton channel CFM90_02505 IPR025824 OB-fold nucleic acid binding domain CFM90_02505 IPR003753 Exonuclease VII, large subunit CFM90_02505 IPR020579 Exonuclease VII, large subunit, C-terminal CFM90_02510 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CFM90_02510 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CFM90_02510 IPR019832 Manganese/iron superoxide dismutase, C-terminal CFM90_02510 IPR001189 Manganese/iron superoxide dismutase CFM90_02510 IPR019833 Manganese/iron superoxide dismutase, binding site CFM90_02510 IPR019831 Manganese/iron superoxide dismutase, N-terminal CFM90_02520 IPR000644 CBS domain CFM90_02520 IPR008915 Peptidase M50 CFM90_02520 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS CFM90_02530 IPR014710 RmlC-like jelly roll fold CFM90_02530 IPR011051 RmlC-like cupin domain superfamily CFM90_02530 IPR010282 Uncharacterised protein family HutD/Ves CFM90_02530 IPR023482 Uncharacterised protein family Ves CFM90_02535 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CFM90_02535 IPR000119 Histone-like DNA-binding protein CFM90_02535 IPR020816 Histone-like DNA-binding protein, conserved site CFM90_02550 IPR003474 Gluconate transporter CFM90_02560 IPR035906 MetI-like superfamily CFM90_02560 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_02565 IPR006675 HDIG domain CFM90_02565 IPR021812 Protein of unknown function DUF3391 CFM90_02565 IPR003607 HD/PDEase domain CFM90_02565 IPR037522 HD-GYP domain CFM90_02565 IPR006674 HD domain CFM90_02580 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_02580 IPR018313 Solute-binding protein family 3, conserved site CFM90_02580 IPR037298 Cyclohexadienyl dehydratase pheC CFM90_02585 IPR017439 Amidohydrolase CFM90_02585 IPR002933 Peptidase M20 CFM90_02585 IPR011650 Peptidase M20, dimerisation domain CFM90_02585 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_02610 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02610 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CFM90_02610 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CFM90_02610 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CFM90_02610 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CFM90_02610 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CFM90_02610 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CFM90_02615 IPR009057 Homeobox-like domain superfamily CFM90_02615 IPR018062 HTH domain AraC-type, conserved site CFM90_02615 IPR018060 DNA binding HTH domain, AraC-type CFM90_02615 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily CFM90_02615 IPR011257 DNA glycosylase CFM90_02615 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CFM90_02615 IPR003265 HhH-GPD domain CFM90_02615 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CFM90_02615 IPR004026 Ada DNA repair, metal-binding CFM90_02615 IPR035451 Ada-like domain superfamily CFM90_02620 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_02620 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_02620 IPR036291 NAD(P)-binding domain superfamily CFM90_02625 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CFM90_02635 IPR029055 Nucleophile aminohydrolases, N-terminal CFM90_02640 IPR032808 DoxX family CFM90_02645 IPR020846 Major facilitator superfamily domain CFM90_02645 IPR011701 Major facilitator superfamily CFM90_02645 IPR036259 MFS transporter superfamily CFM90_02645 IPR023721 Multidrug resistance protein MdtD CFM90_02650 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02650 IPR000847 Transcription regulator HTH, LysR CFM90_02650 IPR036390 Winged helix DNA-binding domain superfamily CFM90_02650 IPR005119 LysR, substrate-binding CFM90_02655 IPR005119 LysR, substrate-binding CFM90_02655 IPR000847 Transcription regulator HTH, LysR CFM90_02655 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02655 IPR036390 Winged helix DNA-binding domain superfamily CFM90_02660 IPR036328 C-type lysozyme inhibitor superfamily CFM90_02660 IPR018660 C-type lysozyme inhibitor CFM90_02665 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_02665 IPR001279 Metallo-beta-lactamase CFM90_02675 IPR022394 Methylamine utilisation protein, MauG CFM90_02675 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CFM90_02675 IPR004852 Di-haem cytochrome c peroxidase CFM90_02675 IPR036909 Cytochrome c-like domain superfamily CFM90_02675 IPR009056 Cytochrome c-like domain CFM90_02690 IPR024084 Isopropylmalate dehydrogenase-like domain CFM90_02690 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CFM90_02690 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CFM90_02710 IPR002059 Cold-shock protein, DNA-binding CFM90_02710 IPR012156 Cold shock, CspA CFM90_02710 IPR011129 Cold shock domain CFM90_02710 IPR012340 Nucleic acid-binding, OB-fold CFM90_02710 IPR019844 Cold-shock (CSD) domain CFM90_02715 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CFM90_02715 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CFM90_02715 IPR003769 Adaptor protein ClpS, core CFM90_02720 IPR028299 ClpA/B, conserved site 2 CFM90_02720 IPR018368 ClpA/B, conserved site 1 CFM90_02720 IPR001270 ClpA/B family CFM90_02720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02720 IPR041546 ClpA/ClpB, AAA lid domain CFM90_02720 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CFM90_02720 IPR004176 Clp, N-terminal CFM90_02720 IPR036628 Clp, N-terminal domain superfamily CFM90_02720 IPR019489 Clp ATPase, C-terminal CFM90_02720 IPR003959 ATPase, AAA-type, core CFM90_02720 IPR003593 AAA+ ATPase domain CFM90_02725 IPR029054 dUTPase-like CFM90_02725 IPR036157 dUTPase-like superfamily CFM90_02725 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CFM90_02725 IPR033704 dUTPase, trimeric CFM90_02730 IPR019949 Luciferase family oxidoreductase, group 1 CFM90_02730 IPR036661 Luciferase-like domain superfamily CFM90_02730 IPR011251 Luciferase-like domain CFM90_02735 IPR003382 Flavoprotein CFM90_02735 IPR036551 Flavin prenyltransferase-like CFM90_02735 IPR035929 CoaB-like superfamily CFM90_02735 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CFM90_02735 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CFM90_02745 IPR001872 Peptidase A8, signal peptidase II CFM90_02750 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CFM90_02750 IPR002301 Isoleucine-tRNA ligase CFM90_02750 IPR023585 Isoleucine-tRNA ligase, type 1 CFM90_02750 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CFM90_02750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_02750 IPR002300 Aminoacyl-tRNA synthetase, class Ia CFM90_02750 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFM90_02750 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CFM90_02750 IPR010663 Zinc finger, FPG/IleRS-type CFM90_02750 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFM90_02755 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CFM90_02755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_02755 IPR015864 FAD synthetase CFM90_02755 IPR023465 Riboflavin kinase domain superfamily CFM90_02755 IPR023468 Riboflavin kinase CFM90_02755 IPR002606 Riboflavin kinase, bacterial CFM90_02760 IPR029151 Periplasmic sensor-like domain superfamily CFM90_02760 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_02760 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_02760 IPR001789 Signal transduction response regulator, receiver domain CFM90_02760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_02760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_02760 IPR005467 Histidine kinase domain CFM90_02760 IPR011006 CheY-like superfamily CFM90_02760 IPR015387 LuxQ, periplasmic CFM90_02760 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_02765 IPR000792 Transcription regulator LuxR, C-terminal CFM90_02765 IPR011006 CheY-like superfamily CFM90_02765 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_02765 IPR001789 Signal transduction response regulator, receiver domain CFM90_02770 IPR002376 Formyl transferase, N-terminal CFM90_02770 IPR004607 Phosphoribosylglycinamide formyltransferase CFM90_02770 IPR036477 Formyl transferase, N-terminal domain superfamily CFM90_02770 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CFM90_02775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_02775 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CFM90_02775 IPR035926 NusB-like superfamily CFM90_02775 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CFM90_02775 IPR006027 NusB/RsmB/TIM44 CFM90_02775 IPR023267 RNA (C5-cytosine) methyltransferase CFM90_02775 IPR004573 rRNA small subunit methyltransferase B CFM90_02780 IPR001736 Phospholipase D/Transphosphatidylase CFM90_02780 IPR025202 Phospholipase D-like domain CFM90_02785 IPR010920 LSM domain superfamily CFM90_02785 IPR006685 Mechanosensitive ion channel MscS CFM90_02785 IPR006686 Mechanosensitive ion channel MscS, conserved site CFM90_02785 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CFM90_02785 IPR024393 Mechanosensitive ion channel MscS, porin domain CFM90_02785 IPR011066 Mechanosensitive ion channel MscS, C-terminal CFM90_02785 IPR023408 Mechanosensitive ion channel MscS domain superfamily CFM90_02785 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CFM90_02795 IPR036094 Quinolinate synthetase A superfamily CFM90_02795 IPR023513 Quinolinate synthase A, type 1 CFM90_02795 IPR003473 Quinolinate synthetase A CFM90_02800 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CFM90_02800 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CFM90_02800 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CFM90_02800 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CFM90_02800 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CFM90_02800 IPR004393 Nicotinate-nucleotide pyrophosphorylase CFM90_02800 IPR013785 Aldolase-type TIM barrel CFM90_02805 IPR005288 L-aspartate oxidase CFM90_02805 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CFM90_02805 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CFM90_02805 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CFM90_02805 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CFM90_02805 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_02810 IPR038584 Ribosomal protein L33 superfamily CFM90_02810 IPR018264 Ribosomal protein L33, conserved site CFM90_02810 IPR011332 Zinc-binding ribosomal protein CFM90_02810 IPR001705 Ribosomal protein L33 CFM90_02815 IPR037147 Ribosomal protein L28/L24 superfamily CFM90_02815 IPR034704 L28p-like CFM90_02815 IPR026569 Ribosomal protein L28/L24 CFM90_02815 IPR001383 Ribosomal protein L28 CFM90_02820 IPR037518 MPN domain CFM90_02820 IPR010994 RuvA domain 2-like CFM90_02820 IPR001405 Uncharacterised protein family UPF0758 CFM90_02820 IPR025657 RadC-like JAB domain CFM90_02825 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CFM90_02830 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CFM90_02835 IPR000709 Leu/Ile/Val-binding protein CFM90_02835 IPR028081 Leucine-binding protein domain CFM90_02835 IPR028082 Periplasmic binding protein-like I CFM90_02840 IPR001851 ABC transporter, permease CFM90_02845 IPR001851 ABC transporter, permease CFM90_02845 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CFM90_02850 IPR003439 ABC transporter-like CFM90_02850 IPR003593 AAA+ ATPase domain CFM90_02850 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFM90_02850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02850 IPR017871 ABC transporter, conserved site CFM90_02855 IPR017871 ABC transporter, conserved site CFM90_02855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02855 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CFM90_02855 IPR003593 AAA+ ATPase domain CFM90_02855 IPR003439 ABC transporter-like CFM90_02865 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_02865 IPR005814 Aminotransferase class-III CFM90_02865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_02865 IPR004636 Acetylornithine/Succinylornithine transaminase family CFM90_02865 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_02870 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CFM90_02870 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CFM90_02870 IPR012675 Beta-grasp domain superfamily CFM90_02870 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CFM90_02870 IPR017927 FAD-binding domain, ferredoxin reductase-type CFM90_02870 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_02870 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_02870 IPR017938 Riboflavin synthase-like beta-barrel CFM90_02870 IPR001433 Oxidoreductase FAD/NAD(P)-binding CFM90_02880 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CFM90_02880 IPR029787 Nucleotide cyclase CFM90_02880 IPR000160 GGDEF domain CFM90_02900 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CFM90_02900 IPR036291 NAD(P)-binding domain superfamily CFM90_02900 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CFM90_02900 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CFM90_02900 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_02900 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CFM90_02900 IPR006398 2-hydroxy-3-oxopropionate reductase CFM90_02900 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFM90_02910 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02910 IPR005119 LysR, substrate-binding CFM90_02910 IPR036390 Winged helix DNA-binding domain superfamily CFM90_02910 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain CFM90_02910 IPR000847 Transcription regulator HTH, LysR CFM90_02920 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CFM90_02920 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CFM90_02920 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CFM90_02920 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CFM90_02930 IPR011798 Adenosine 5'-phosphosulphate reductase CFM90_02930 IPR002500 Phosphoadenosine phosphosulphate reductase CFM90_02930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_02930 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CFM90_02935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_02935 IPR011784 Sulphate adenylyltransferase, small subunit CFM90_02935 IPR002500 Phosphoadenosine phosphosulphate reductase CFM90_02940 IPR011779 Sulphate adenylyltransferase, large subunit CFM90_02940 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain CFM90_02940 IPR031157 Tr-type G domain, conserved site CFM90_02940 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CFM90_02940 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_02940 IPR000795 Transcription factor, GTP-binding domain CFM90_02940 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_02940 IPR005225 Small GTP-binding protein domain CFM90_02945 IPR006366 Uroporphyrin-III C-methyltransferase CFM90_02945 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CFM90_02945 IPR014777 Tetrapyrrole methylase, subdomain 1 CFM90_02945 IPR035996 Tetrapyrrole methylase superfamily CFM90_02945 IPR000878 Tetrapyrrole methylase CFM90_02945 IPR014776 Tetrapyrrole methylase, subdomain 2 CFM90_02970 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CFM90_02970 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CFM90_02970 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CFM90_02970 IPR023042 Peptidase M17, leucine aminopeptidase CFM90_02975 IPR036768 DNA polymerase III subunit chi superfamily CFM90_02975 IPR007459 DNA polymerase III chi subunit, HolC CFM90_02985 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CFM90_02985 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CFM90_02985 IPR004404 Dihydroxy-acid dehydratase CFM90_02985 IPR042096 Dihydroxy-acid dehydratase, C-terminal CFM90_02985 IPR037237 IlvD/EDD, N-terminal domain CFM90_02990 IPR005119 LysR, substrate-binding CFM90_02990 IPR036390 Winged helix DNA-binding domain superfamily CFM90_02990 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_02990 IPR000847 Transcription regulator HTH, LysR CFM90_02990 IPR037412 HTH-type transcriptional regulator IlvR, PBP2 domain CFM90_02995 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CFM90_03030 IPR012910 TonB-dependent receptor, plug domain CFM90_03030 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFM90_03030 IPR010916 TonB box, conserved site CFM90_03030 IPR039426 Vitamin B12 transporter BtuB-like CFM90_03030 IPR010101 TonB-dependent vitamin B12 transporter BtuB CFM90_03030 IPR000531 TonB-dependent receptor-like, beta-barrel CFM90_03030 IPR037066 TonB-dependent receptor, plug domain superfamily CFM90_03035 IPR000522 ABC transporter, permease protein, BtuC-like CFM90_03035 IPR037294 ABC transporter, BtuC-like CFM90_03035 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC CFM90_03040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03040 IPR015863 ABC transporter, hemin import, HmuV CFM90_03040 IPR017871 ABC transporter, conserved site CFM90_03040 IPR003439 ABC transporter-like CFM90_03040 IPR003593 AAA+ ATPase domain CFM90_03045 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic CFM90_03045 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily CFM90_03045 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like CFM90_03045 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal CFM90_03050 IPR003805 Adenosylcobinamide-GDP ribazoletransferase CFM90_03060 IPR002491 ABC transporter periplasmic binding domain CFM90_03060 IPR023544 ABC transporter, vitamin B12-binding protein CFM90_03065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_03065 IPR004839 Aminotransferase, class I/classII CFM90_03065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_03065 IPR005860 L-threonine-O-3-phosphate decarboxylase CFM90_03065 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CFM90_03065 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_03070 IPR004485 Cobalamin biosynthesis CobD/CbiB CFM90_03070 IPR031347 Protein AmpE CFM90_03075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03075 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase CFM90_03080 IPR004459 Cobyric acid synthase CobQ CFM90_03080 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 CFM90_03080 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CFM90_03080 IPR017929 CobB/CobQ glutamine amidotransferase CFM90_03080 IPR029062 Class I glutamine amidotransferase-like CFM90_03080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03080 IPR011698 CobB/CobQ-like glutamine amidotransferase CFM90_03095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_03095 IPR004821 Cytidyltransferase-like domain CFM90_03095 IPR003721 Pantoate-beta-alanine ligase CFM90_03095 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CFM90_03100 IPR003768 Segregation and condensation protein A CFM90_03115 IPR007452 Translocation and assembly module TamB CFM90_03125 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CFM90_03125 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CFM90_03125 IPR023458 Methionine-tRNA ligase, type 1 CFM90_03125 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFM90_03125 IPR015413 Methionyl/Leucyl tRNA synthetase CFM90_03125 IPR014758 Methionyl-tRNA synthetase CFM90_03125 IPR002547 tRNA-binding domain CFM90_03125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_03125 IPR012340 Nucleic acid-binding, OB-fold CFM90_03125 IPR029038 Methionyl-tRNA synthetase, Zn-domain CFM90_03125 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFM90_03125 IPR033911 Methioninyl-tRNA synthetase core domain CFM90_03130 IPR006664 Outer membrane protein, bacterial CFM90_03130 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CFM90_03130 IPR006665 OmpA-like domain CFM90_03130 IPR006690 Outer membrane protein, OmpA-like, conserved site CFM90_03130 IPR036737 OmpA-like domain superfamily CFM90_03130 IPR008722 Outer membrane porin F, N-terminal CFM90_03135 IPR000808 Mrp, conserved site CFM90_03135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03135 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CFM90_03135 IPR019591 Mrp/NBP35 ATP-binding protein CFM90_03165 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_03165 IPR009010 Aspartate decarboxylase-like domain superfamily CFM90_03165 IPR006443 Formate dehydrogenase-N, alpha subunit CFM90_03165 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CFM90_03165 IPR006656 Molybdopterin oxidoreductase CFM90_03165 IPR006657 Molybdopterin dinucleotide-binding domain CFM90_03165 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CFM90_03165 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CFM90_03170 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_03170 IPR000813 7Fe ferredoxin CFM90_03170 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_03190 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CFM90_03190 IPR001424 Superoxide dismutase, copper/zinc binding domain CFM90_03190 IPR018152 Superoxide dismutase, copper/zinc, binding site CFM90_03190 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CFM90_03195 IPR003786 Sulfur carrier protein FdhD CFM90_03195 IPR016193 Cytidine deaminase-like CFM90_03200 IPR036157 dUTPase-like superfamily CFM90_03200 IPR033704 dUTPase, trimeric CFM90_03200 IPR011962 dCTP deaminase CFM90_03200 IPR029054 dUTPase-like CFM90_03205 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_03205 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_03205 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CFM90_03205 IPR011193 Ornithine/lysine/arginine decarboxylase CFM90_03205 IPR000310 Orn/Lys/Arg decarboxylase, major domain CFM90_03205 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CFM90_03205 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CFM90_03205 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_03215 IPR020557 Fumarate lyase, conserved site CFM90_03215 IPR009049 Argininosuccinate lyase CFM90_03215 IPR029419 Argininosuccinate lyase, C-terminal CFM90_03215 IPR000362 Fumarate lyase family CFM90_03215 IPR024083 Fumarase/histidase, N-terminal CFM90_03215 IPR022761 Fumarate lyase, N-terminal CFM90_03215 IPR008948 L-Aspartase-like CFM90_03240 IPR021135 Phosphoenolpyruvate carboxylase CFM90_03240 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_03240 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type CFM90_03240 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site CFM90_03240 IPR033129 Phosphoenolpyruvate carboxylase, His active site CFM90_03245 IPR000860 Porphobilinogen deaminase CFM90_03245 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CFM90_03245 IPR022417 Porphobilinogen deaminase, N-terminal CFM90_03245 IPR022418 Porphobilinogen deaminase, C-terminal CFM90_03245 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CFM90_03250 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CFM90_03250 IPR039793 Uroporphyrinogen-III synthase CFM90_03250 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily CFM90_03270 IPR011701 Major facilitator superfamily CFM90_03270 IPR020846 Major facilitator superfamily domain CFM90_03270 IPR036259 MFS transporter superfamily CFM90_03275 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_03275 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_03275 IPR036291 NAD(P)-binding domain superfamily CFM90_03280 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFM90_03280 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_03280 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_03280 IPR015590 Aldehyde dehydrogenase domain CFM90_03280 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_03285 IPR036649 Inorganic pyrophosphatase superfamily CFM90_03285 IPR008162 Inorganic pyrophosphatase CFM90_03300 IPR036526 Carbon-nitrogen hydrolase superfamily CFM90_03300 IPR000132 Nitrilase/cyanide hydratase, conserved site CFM90_03300 IPR014445 Glutamine-dependent NAD(+) synthetase CFM90_03300 IPR003010 Carbon-nitrogen hydrolase CFM90_03300 IPR022310 NAD/GMP synthase CFM90_03300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_03300 IPR003694 NAD(+) synthetase CFM90_03305 IPR025714 Methyltransferase domain CFM90_03305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_03310 IPR002187 Nitrogen regulatory protein PII CFM90_03310 IPR011322 Nitrogen regulatory PII-like, alpha/beta CFM90_03310 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CFM90_03310 IPR017918 Nitrogen regulatory protein PII, conserved site CFM90_03310 IPR002332 Nitrogen regulatory protein P-II, urydylation site CFM90_03315 IPR005115 Uncharacterised domain UPF0126 CFM90_03325 IPR005982 Thioredoxin reductase CFM90_03325 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CFM90_03325 IPR023753 FAD/NAD(P)-binding domain CFM90_03325 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_03330 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_03330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03330 IPR018541 FtsK gamma domain CFM90_03330 IPR002543 FtsK domain CFM90_03330 IPR025199 DNA translocase FtsK, 4TM region CFM90_03330 IPR036390 Winged helix DNA-binding domain superfamily CFM90_03330 IPR041027 FtsK alpha domain CFM90_03335 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CFM90_03335 IPR029046 Lipoprotein localisation LolA/LolB/LppX CFM90_03335 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CFM90_03345 IPR003593 AAA+ ATPase domain CFM90_03345 IPR032423 AAA C-terminal domain CFM90_03345 IPR003959 ATPase, AAA-type, core CFM90_03345 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CFM90_03345 IPR021886 MgsA AAA+ ATPase C-terminal CFM90_03345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03350 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CFM90_03350 IPR006195 Aminoacyl-tRNA synthetase, class II CFM90_03350 IPR002317 Serine-tRNA ligase, type1 CFM90_03350 IPR015866 Serine-tRNA synthetase, type1, N-terminal CFM90_03350 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CFM90_03350 IPR033729 Serine-tRNA ligase catalytic core domain CFM90_03350 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CFM90_03360 IPR009057 Homeobox-like domain superfamily CFM90_03360 IPR006118 Recombinase, conserved site CFM90_03360 IPR006119 Resolvase, N-terminal catalytic domain CFM90_03360 IPR006120 Resolvase, HTH domain CFM90_03360 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CFM90_03385 IPR036397 Ribonuclease H superfamily CFM90_03385 IPR012337 Ribonuclease H-like superfamily CFM90_03385 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type CFM90_03385 IPR001584 Integrase, catalytic core CFM90_03390 IPR003593 AAA+ ATPase domain CFM90_03390 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CFM90_03390 IPR002611 IstB-like ATP-binding protein CFM90_03390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03420 IPR033480 Single Cache domain 2 CFM90_03420 IPR017171 Signal transduction histidine kinase, MctS CFM90_03420 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CFM90_03420 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_03420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_03425 IPR010054 General secretion pathway protein G CFM90_03425 IPR000983 Bacterial general secretion pathway protein G-type pilin CFM90_03425 IPR013545 Type II secretion system protein G CFM90_03425 IPR012902 Prokaryotic N-terminal methylation site CFM90_03430 IPR003004 GspF/PilC family CFM90_03430 IPR042094 Type II secretion system F domain superfamily CFM90_03430 IPR001992 Type II secretion system conserved site CFM90_03430 IPR018076 Type II secretion system F domain CFM90_03435 IPR037257 General secretory system II, protein E, N-terminal superfamily CFM90_03435 IPR001482 Type II/IV secretion system protein CFM90_03435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03435 IPR042181 Type II secretion system, protein E, N-terminal CFM90_03435 IPR013369 Type II secretion system GspE CFM90_03460 IPR004846 Type II/III secretion system CFM90_03460 IPR013356 Type II secretion system GspD CFM90_03460 IPR038591 NolW-like superfamily CFM90_03460 IPR005644 NolW-like CFM90_03460 IPR001775 GspD/PilQ family CFM90_03460 IPR004845 Type II secretion system GspD, conserved site CFM90_03470 IPR000983 Bacterial general secretion pathway protein G-type pilin CFM90_03470 IPR013545 Type II secretion system protein G CFM90_03470 IPR012902 Prokaryotic N-terminal methylation site CFM90_03470 IPR010054 General secretion pathway protein G CFM90_03485 IPR001287 Nitrite reductase, copper-type CFM90_03485 IPR001117 Multicopper oxidase, type 1 CFM90_03485 IPR011707 Multicopper oxidase, type 3 CFM90_03485 IPR008972 Cupredoxin CFM90_03520 IPR023346 Lysozyme-like domain superfamily CFM90_03520 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A CFM90_03520 IPR008258 Transglycosylase SLT domain 1 CFM90_03520 IPR000189 Prokaryotic transglycosylase, active site CFM90_03540 IPR013766 Thioredoxin domain CFM90_03540 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CFM90_03540 IPR036249 Thioredoxin-like superfamily CFM90_03550 IPR010694 Uncharacterised protein family VirK CFM90_03590 IPR002550 CNNM, transmembrane domain CFM90_03590 IPR000644 CBS domain CFM90_03590 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_03590 IPR016169 FAD-binding, type PCMH, subdomain 2 CFM90_03590 IPR005170 Transporter-associated domain CFM90_03645 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_03645 IPR006076 FAD dependent oxidoreductase CFM90_03645 IPR023080 D-amino acid dehydrogenase DadA CFM90_03650 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_03655 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFM90_03655 IPR003439 ABC transporter-like CFM90_03655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03655 IPR003593 AAA+ ATPase domain CFM90_03655 IPR017871 ABC transporter, conserved site CFM90_03660 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFM90_03660 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_03660 IPR035906 MetI-like superfamily CFM90_03665 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_03665 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFM90_03665 IPR035906 MetI-like superfamily CFM90_03670 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_03670 IPR018313 Solute-binding protein family 3, conserved site CFM90_03670 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CFM90_03670 IPR001320 Ionotropic glutamate receptor CFM90_03680 IPR014757 Transcription regulator IclR, C-terminal CFM90_03680 IPR036390 Winged helix DNA-binding domain superfamily CFM90_03680 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_03680 IPR005471 Transcription regulator IclR, N-terminal CFM90_03680 IPR029016 GAF-like domain superfamily CFM90_03680 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR CFM90_03685 IPR004163 Coenzyme A transferase binding site CFM90_03685 IPR004165 Coenzyme A transferase family I CFM90_03685 IPR012792 3-oxoacid CoA-transferase, subunit A CFM90_03685 IPR037171 NagB/RpiA transferase-like CFM90_03690 IPR037171 NagB/RpiA transferase-like CFM90_03690 IPR004164 Coenzyme A transferase active site CFM90_03690 IPR004165 Coenzyme A transferase family I CFM90_03690 IPR012791 3-oxoacid CoA-transferase, subunit B CFM90_03695 IPR012793 Beta-ketoadipyl CoA thiolase CFM90_03695 IPR002155 Thiolase CFM90_03695 IPR016039 Thiolase-like CFM90_03695 IPR020616 Thiolase, N-terminal CFM90_03695 IPR020613 Thiolase, conserved site CFM90_03695 IPR020615 Thiolase, acyl-enzyme intermediate active site CFM90_03695 IPR020610 Thiolase, active site CFM90_03695 IPR020617 Thiolase, C-terminal CFM90_03700 IPR024083 Fumarase/histidase, N-terminal CFM90_03700 IPR020557 Fumarate lyase, conserved site CFM90_03700 IPR019468 Adenylosuccinate lyase C-terminal CFM90_03700 IPR022761 Fumarate lyase, N-terminal CFM90_03700 IPR008948 L-Aspartase-like CFM90_03700 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase CFM90_03700 IPR000362 Fumarate lyase family CFM90_03705 IPR000073 Alpha/beta hydrolase fold-1 CFM90_03705 IPR022742 Serine aminopeptidase, S33 CFM90_03705 IPR026968 3-oxoadipate enol-lactonase 1/2 CFM90_03705 IPR029058 Alpha/Beta hydrolase fold CFM90_03710 IPR029032 AhpD-like CFM90_03710 IPR003779 Carboxymuconolactone decarboxylase-like CFM90_03710 IPR012788 4-carboxymuconolactone decarboxylase CFM90_03725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03725 IPR003593 AAA+ ATPase domain CFM90_03725 IPR003439 ABC transporter-like CFM90_03725 IPR017871 ABC transporter, conserved site CFM90_03725 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFM90_03730 IPR017871 ABC transporter, conserved site CFM90_03730 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CFM90_03730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03730 IPR003439 ABC transporter-like CFM90_03730 IPR003593 AAA+ ATPase domain CFM90_03735 IPR028081 Leucine-binding protein domain CFM90_03735 IPR000709 Leu/Ile/Val-binding protein CFM90_03735 IPR028082 Periplasmic binding protein-like I CFM90_03740 IPR005119 LysR, substrate-binding CFM90_03740 IPR000847 Transcription regulator HTH, LysR CFM90_03740 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_03740 IPR036390 Winged helix DNA-binding domain superfamily CFM90_03745 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_03745 IPR002938 FAD-binding domain CFM90_03745 IPR012733 4-hydroxybenzoate 3-monooxygenase CFM90_03750 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain CFM90_03750 IPR016062 Hypothetical protein TM1410-related CFM90_03750 IPR017853 Glycoside hydrolase superfamily CFM90_03750 IPR013785 Aldolase-type TIM barrel CFM90_03750 IPR016063 Extracellular protein CFM90_03760 IPR004368 Translation initiation factor IF-1 CFM90_03760 IPR022967 RNA-binding domain, S1 CFM90_03760 IPR006196 RNA-binding domain, S1, IF1 type CFM90_03760 IPR012340 Nucleic acid-binding, OB-fold CFM90_03770 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_03770 IPR005835 Nucleotidyl transferase domain CFM90_03770 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CFM90_03775 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CFM90_03775 IPR002303 Valine-tRNA ligase CFM90_03775 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CFM90_03775 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFM90_03775 IPR002300 Aminoacyl-tRNA synthetase, class Ia CFM90_03775 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CFM90_03775 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CFM90_03775 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFM90_03775 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CFM90_03775 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CFM90_03780 IPR034739 UvrD/AddA helicase, N-terminal CFM90_03780 IPR014017 UvrD-like DNA helicase, C-terminal CFM90_03780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03780 IPR000212 DNA helicase, UvrD/REP type CFM90_03780 IPR014016 UvrD-like helicase, ATP-binding domain CFM90_03780 IPR013986 DExx box DNA helicase domain superfamily CFM90_03780 IPR005753 DNA helicase, ATP-dependent, UvrD type CFM90_03790 IPR011009 Protein kinase-like domain superfamily CFM90_03790 IPR005280 Homoserine kinase, type II CFM90_03790 IPR002575 Aminoglycoside phosphotransferase CFM90_03800 IPR031100 LOG family CFM90_03800 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CFM90_03805 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CFM90_03805 IPR002421 5'-3' exonuclease, N-terminal CFM90_03805 IPR012337 Ribonuclease H-like superfamily CFM90_03805 IPR029060 PIN-like domain superfamily CFM90_03805 IPR008918 Helix-hairpin-helix motif, class 2 CFM90_03805 IPR002298 DNA polymerase A CFM90_03805 IPR036397 Ribonuclease H superfamily CFM90_03805 IPR020045 DNA polymerase I-like, H3TH domain CFM90_03805 IPR018320 DNA polymerase 1 CFM90_03805 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CFM90_03805 IPR019760 DNA-directed DNA polymerase, family A, conserved site CFM90_03805 IPR002562 3'-5' exonuclease domain CFM90_03805 IPR001098 DNA-directed DNA polymerase, family A, palm domain CFM90_03810 IPR023753 FAD/NAD(P)-binding domain CFM90_03810 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_03815 IPR002925 Dienelactone hydrolase CFM90_03815 IPR029058 Alpha/Beta hydrolase fold CFM90_03830 IPR036873 Rhodanese-like domain superfamily CFM90_03830 IPR001763 Rhodanese-like domain CFM90_03845 IPR003761 Exonuclease VII, small subunit CFM90_03845 IPR037004 Exonuclease VII, small subunit superfamily CFM90_03850 IPR008949 Isoprenoid synthase domain superfamily CFM90_03850 IPR033749 Polyprenyl synthetase, conserved site CFM90_03850 IPR000092 Polyprenyl synthetase CFM90_03855 IPR029061 Thiamin diphosphate-binding fold CFM90_03855 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CFM90_03855 IPR005475 Transketolase-like, pyrimidine-binding domain CFM90_03855 IPR020826 Transketolase binding site CFM90_03855 IPR033248 Transketolase, C-terminal domain CFM90_03855 IPR005474 Transketolase, N-terminal CFM90_03855 IPR005477 Deoxyxylulose-5-phosphate synthase CFM90_03860 IPR022838 GTP cyclohydrolase FolE2 CFM90_03860 IPR003801 GTP cyclohydrolase FolE2/MptA CFM90_03865 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CFM90_03865 IPR000905 Gcp-like domain CFM90_03865 IPR017861 Kae1/TsaD family CFM90_03870 IPR023166 HI0933-like insert domain superfamily CFM90_03870 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_03870 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like CFM90_03875 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CFM90_03875 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CFM90_03875 IPR019004 Uncharacterised protein YqeY/Aim41 CFM90_03875 IPR042184 YqeY/Aim41, N-terminal domain CFM90_03880 IPR002694 Zinc finger, CHC2-type CFM90_03880 IPR013173 DNA primase DnaG, DnaB-binding domain CFM90_03880 IPR036977 DNA Primase, CHC2-type zinc finger CFM90_03880 IPR019475 DNA primase, DnaB-helicase binding domain CFM90_03880 IPR034151 Bacterial DnaG primase, TOPRIM domain CFM90_03880 IPR013264 DNA primase, catalytic core, N-terminal CFM90_03880 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CFM90_03880 IPR030846 DNA primase DnaG, bacteria CFM90_03880 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CFM90_03880 IPR006295 DNA primase, DnaG CFM90_03880 IPR006171 TOPRIM domain CFM90_03885 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_03885 IPR007127 RNA polymerase sigma factor 70, region 1.1 CFM90_03885 IPR028630 RNA polymerase sigma factor RpoD CFM90_03885 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CFM90_03885 IPR007631 RNA polymerase sigma factor 70, non-essential domain CFM90_03885 IPR007630 RNA polymerase sigma-70 region 4 CFM90_03885 IPR007624 RNA polymerase sigma-70 region 3 CFM90_03885 IPR007627 RNA polymerase sigma-70 region 2 CFM90_03885 IPR009042 RNA polymerase sigma-70 region 1.2 CFM90_03885 IPR000943 RNA polymerase sigma-70 CFM90_03885 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_03885 IPR013325 RNA polymerase sigma factor, region 2 CFM90_03885 IPR042189 Sigma-70 factor, region 1.1 superfamily CFM90_03885 IPR014284 RNA polymerase sigma-70 like domain CFM90_03895 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_03895 IPR001279 Metallo-beta-lactamase CFM90_03905 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_03905 IPR001279 Metallo-beta-lactamase CFM90_03905 IPR029039 Flavoprotein-like superfamily CFM90_03905 IPR001226 Flavodoxin, conserved site CFM90_03905 IPR008254 Flavodoxin/nitric oxide synthase CFM90_03905 IPR002563 Flavin reductase like domain CFM90_03905 IPR012349 FMN-binding split barrel CFM90_03910 IPR011545 DEAD/DEAH box helicase domain CFM90_03910 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CFM90_03910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03910 IPR001650 Helicase, C-terminal CFM90_03910 IPR028622 ATP-dependent RNA helicase RhlE CFM90_03910 IPR014014 RNA helicase, DEAD-box type, Q motif CFM90_03910 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_03915 IPR022380 Glutamyl-Q tRNA(Asp) synthetase CFM90_03915 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CFM90_03915 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CFM90_03915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_03920 IPR036390 Winged helix DNA-binding domain superfamily CFM90_03920 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_03920 IPR000847 Transcription regulator HTH, LysR CFM90_03920 IPR005119 LysR, substrate-binding CFM90_03925 IPR012093 Pirin CFM90_03925 IPR014710 RmlC-like jelly roll fold CFM90_03925 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain CFM90_03925 IPR011051 RmlC-like cupin domain superfamily CFM90_03925 IPR003829 Pirin, N-terminal domain CFM90_03930 IPR029039 Flavoprotein-like superfamily CFM90_03930 IPR005025 NADPH-dependent FMN reductase-like CFM90_03930 IPR008254 Flavodoxin/nitric oxide synthase CFM90_03940 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CFM90_03940 IPR040982 DNA polymerase III alpha subunit finger domain CFM90_03940 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CFM90_03940 IPR029460 DNA polymerase, helix-hairpin-helix motif CFM90_03940 IPR016195 Polymerase/histidinol phosphatase-like CFM90_03940 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CFM90_03940 IPR004805 DNA polymerase III, alpha subunit CFM90_03940 IPR003141 Polymerase/histidinol phosphatase, N-terminal CFM90_03940 IPR004013 PHP domain CFM90_03955 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_03955 IPR001173 Glycosyltransferase 2-like CFM90_03965 IPR017871 ABC transporter, conserved site CFM90_03965 IPR003593 AAA+ ATPase domain CFM90_03965 IPR011527 ABC transporter type 1, transmembrane domain CFM90_03965 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFM90_03965 IPR003439 ABC transporter-like CFM90_03965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_03965 IPR011917 ABC transporter, lipid A export, MsbA CFM90_03980 IPR012340 Nucleic acid-binding, OB-fold CFM90_03980 IPR003029 S1 domain CFM90_03980 IPR022967 RNA-binding domain, S1 CFM90_03980 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CFM90_03980 IPR004659 Ribonuclease E/G CFM90_03985 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CFM90_03985 IPR029001 Inosine triphosphate pyrophosphatase-like CFM90_03995 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CFM90_04000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_04000 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CFM90_04000 IPR004821 Cytidyltransferase-like domain CFM90_04005 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily CFM90_04005 IPR018375 Coproporphyrinogen III oxidase, conserved site CFM90_04005 IPR001260 Coproporphyrinogen III oxidase, aerobic CFM90_04010 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CFM90_04010 IPR011054 Rudiment single hybrid motif CFM90_04010 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CFM90_04010 IPR016185 Pre-ATP-grasp domain superfamily CFM90_04010 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CFM90_04010 IPR000115 Phosphoribosylglycinamide synthetase CFM90_04010 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CFM90_04010 IPR011761 ATP-grasp fold CFM90_04010 IPR013815 ATP-grasp fold, subdomain 1 CFM90_04015 IPR026564 Transcriptional regulator TACO1-like, domain 3 CFM90_04015 IPR002876 Transcriptional regulator TACO1-like CFM90_04015 IPR017856 Integrase-like, N-terminal CFM90_04015 IPR029072 YebC-like CFM90_04020 IPR033186 Helicase HerA-like C-terminal CFM90_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_04025 IPR000836 Phosphoribosyltransferase domain CFM90_04025 IPR029057 Phosphoribosyltransferase-like CFM90_04025 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CFM90_04025 IPR005765 Uracil phosphoribosyl transferase CFM90_04030 IPR000620 EamA domain CFM90_04035 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_04035 IPR036291 NAD(P)-binding domain superfamily CFM90_04035 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_04040 IPR004363 Methylglyoxal synthase CFM90_04040 IPR018148 Methylglyoxal synthase, active site CFM90_04040 IPR036914 Methylglyoxal synthase-like domain superfamily CFM90_04040 IPR011607 Methylglyoxal synthase-like domain CFM90_04045 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_04045 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_04045 IPR011032 GroES-like superfamily CFM90_04045 IPR036291 NAD(P)-binding domain superfamily CFM90_04045 IPR020843 Polyketide synthase, enoylreductase domain CFM90_04045 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CFM90_04080 IPR003760 ABC transporter substrate-binding protein PnrA-like CFM90_04095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_04095 IPR003593 AAA+ ATPase domain CFM90_04095 IPR015861 ABC transporter, ribose import, RbsA CFM90_04095 IPR017871 ABC transporter, conserved site CFM90_04095 IPR003439 ABC transporter-like CFM90_04100 IPR011701 Major facilitator superfamily CFM90_04100 IPR036259 MFS transporter superfamily CFM90_04100 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CFM90_04100 IPR020846 Major facilitator superfamily domain CFM90_04105 IPR010016 KipI family CFM90_04105 IPR029000 Cyclophilin-like domain superfamily CFM90_04105 IPR003833 Carboxyltransferase domain, subdomain C and D CFM90_04110 IPR003778 Carboxyltransferase domain, subdomain A and B CFM90_04110 IPR029000 Cyclophilin-like domain superfamily CFM90_04115 IPR005501 LamB/YcsF/PxpA-like CFM90_04115 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CFM90_04130 IPR004682 TRAP transporter solute receptor, DctP family CFM90_04130 IPR018389 TRAP transporter solute receptor DctP/TeaA CFM90_04130 IPR038404 TRAP transporter solute receptor DctP superfamily CFM90_04135 IPR000816 Peptidase C15, pyroglutamyl peptidase I CFM90_04135 IPR029762 Pyroglutamyl peptidase I, bacterial-type CFM90_04135 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily CFM90_04135 IPR033694 Pyroglutamyl peptidase I, Cys active site CFM90_04135 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CFM90_04150 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_04150 IPR001279 Metallo-beta-lactamase CFM90_04160 IPR013785 Aldolase-type TIM barrel CFM90_04160 IPR013483 Molybdenum cofactor biosynthesis protein A CFM90_04160 IPR006638 Elp3/MiaB/NifB CFM90_04160 IPR007197 Radical SAM CFM90_04160 IPR010505 Molybdenum cofactor synthesis C-terminal CFM90_04160 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CFM90_04165 IPR023753 FAD/NAD(P)-binding domain CFM90_04165 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_04165 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_04165 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_04170 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_04170 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_04170 IPR000813 7Fe ferredoxin CFM90_04170 IPR022569 Ferredoxin, C-terminal CFM90_04175 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CFM90_04175 IPR006656 Molybdopterin oxidoreductase CFM90_04175 IPR037920 Probable oxidoreductase YoaE, C-terminal CFM90_04175 IPR006657 Molybdopterin dinucleotide-binding domain CFM90_04175 IPR009010 Aspartate decarboxylase-like domain superfamily CFM90_04175 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CFM90_04195 IPR006638 Elp3/MiaB/NifB CFM90_04195 IPR034505 Anaerobic coproporphyrinogen-III oxidase CFM90_04195 IPR023404 Radical SAM, alpha/beta horseshoe CFM90_04195 IPR010723 HemN, C-terminal CFM90_04195 IPR004559 Heme chaperone HemW-like CFM90_04195 IPR007197 Radical SAM CFM90_04200 IPR029001 Inosine triphosphate pyrophosphatase-like CFM90_04200 IPR002637 Ham1-like protein CFM90_04200 IPR020922 dITP/XTP pyrophosphatase CFM90_04205 IPR036345 Exoribonuclease, PH domain 2 superfamily CFM90_04205 IPR018336 Ribonuclease PH, conserved site CFM90_04205 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_04205 IPR027408 PNPase/RNase PH domain superfamily CFM90_04205 IPR002381 Ribonuclease PH, bacterial-type CFM90_04205 IPR001247 Exoribonuclease, phosphorolytic domain 1 CFM90_04205 IPR015847 Exoribonuclease, phosphorolytic domain 2 CFM90_04215 IPR017441 Protein kinase, ATP binding site CFM90_04215 IPR003646 SH3-like domain, bacterial-type CFM90_04215 IPR011009 Protein kinase-like domain superfamily CFM90_04215 IPR008271 Serine/threonine-protein kinase, active site CFM90_04215 IPR000719 Protein kinase domain CFM90_04220 IPR013527 YicC-like, N-terminal CFM90_04220 IPR013551 Domain of unknown function DUF1732 CFM90_04220 IPR005229 Conserved hypothetical protein CHP00255 CFM90_04225 IPR020590 Guanylate kinase, conserved site CFM90_04225 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CFM90_04225 IPR008144 Guanylate kinase-like domain CFM90_04225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_04225 IPR017665 Guanylate kinase CFM90_04230 IPR012293 RNA polymerase subunit, RPB6/omega CFM90_04230 IPR036161 RPB6/omega subunit-like superfamily CFM90_04230 IPR006110 RNA polymerase, subunit omega/K/RPB6 CFM90_04230 IPR003716 DNA-directed RNA polymerase, omega subunit CFM90_04235 IPR033655 RelA, TGS domain CFM90_04235 IPR012676 TGS-like CFM90_04235 IPR004095 TGS CFM90_04235 IPR007685 RelA/SpoT CFM90_04235 IPR003607 HD/PDEase domain CFM90_04235 IPR012675 Beta-grasp domain superfamily CFM90_04235 IPR002912 ACT domain CFM90_04235 IPR004811 RelA/SpoT family CFM90_04245 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CFM90_04245 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CFM90_04245 IPR006358 Transcription elongation factor GreB CFM90_04245 IPR028624 Transcription elongation factor GreA/GreB CFM90_04245 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CFM90_04245 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CFM90_04245 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CFM90_04245 IPR023459 Transcription elongation factor GreA/GreB family CFM90_04265 IPR018392 LysM domain CFM90_04265 IPR036779 LysM domain superfamily CFM90_04265 IPR014004 Transport-associated and nodulation domain, bacteria CFM90_04265 IPR007055 BON domain CFM90_04270 IPR036291 NAD(P)-binding domain superfamily CFM90_04270 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_04270 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_04275 IPR000595 Cyclic nucleotide-binding domain CFM90_04275 IPR029056 Ribokinase-like CFM90_04275 IPR011611 Carbohydrate kinase PfkB CFM90_04280 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like CFM90_04280 IPR013785 Aldolase-type TIM barrel CFM90_04280 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ CFM90_04290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_04290 IPR035906 MetI-like superfamily CFM90_04295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_04295 IPR035906 MetI-like superfamily CFM90_04300 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CFM90_04300 IPR023214 HAD superfamily CFM90_04300 IPR041492 Haloacid dehalogenase-like hydrolase CFM90_04300 IPR006439 HAD hydrolase, subfamily IA CFM90_04300 IPR036412 HAD-like superfamily CFM90_04305 IPR015855 ABC transporter, maltose/maltodextrin import, MalK CFM90_04305 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_04305 IPR017871 ABC transporter, conserved site CFM90_04305 IPR040582 MalK, OB fold domain CFM90_04305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_04305 IPR003439 ABC transporter-like CFM90_04305 IPR003593 AAA+ ATPase domain CFM90_04320 IPR002577 Helix-turn-helix, HxlR type CFM90_04320 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_04320 IPR036390 Winged helix DNA-binding domain superfamily CFM90_04325 IPR035476 Phosphoglucose isomerase, SIS domain 1 CFM90_04325 IPR001672 Phosphoglucose isomerase (PGI) CFM90_04325 IPR035482 Phosphoglucose isomerase, SIS domain 2 CFM90_04325 IPR023096 Phosphoglucose isomerase, C-terminal CFM90_04325 IPR018189 Phosphoglucose isomerase, conserved site CFM90_04325 IPR018189 Phosphoglucose isomerase, conserved site CFM90_04325 IPR001672 Phosphoglucose isomerase (PGI) CFM90_04325 IPR023096 Phosphoglucose isomerase, C-terminal CFM90_04325 IPR035476 Phosphoglucose isomerase, SIS domain 1 CFM90_04325 IPR035482 Phosphoglucose isomerase, SIS domain 2 CFM90_04330 IPR023614 Porin domain superfamily CFM90_04330 IPR001702 Porin, Gram-negative type CFM90_04330 IPR002299 Porin, Neisseria sp. type CFM90_04330 IPR033900 Porin domain, Gram-negative type CFM90_04355 IPR013118 Mannitol dehydrogenase, C-terminal CFM90_04355 IPR000669 Mannitol dehydrogenase CFM90_04355 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_04355 IPR013131 Mannitol dehydrogenase, N-terminal CFM90_04355 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFM90_04355 IPR036291 NAD(P)-binding domain superfamily CFM90_04360 IPR006000 Xylulokinase CFM90_04360 IPR018485 Carbohydrate kinase, FGGY, C-terminal CFM90_04360 IPR018483 Carbohydrate kinase, FGGY, conserved site CFM90_04360 IPR000577 Carbohydrate kinase, FGGY CFM90_04360 IPR018484 Carbohydrate kinase, FGGY, N-terminal CFM90_04365 IPR012318 Crp-type HTH domain CFM90_04365 IPR037171 NagB/RpiA transferase-like CFM90_04365 IPR007324 Sugar-binding domain, putative CFM90_04365 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_04375 IPR000146 Fructose-1,6-bisphosphatase class 1 CFM90_04375 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CFM90_04375 IPR028343 Fructose-1,6-bisphosphatase CFM90_04380 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CFM90_04380 IPR042097 Aminopeptidase N-like , N-terminal CFM90_04380 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CFM90_04380 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CFM90_04380 IPR012779 Peptidase M1, alanyl aminopeptidase CFM90_04380 IPR014782 Peptidase M1, membrane alanine aminopeptidase CFM90_04380 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CFM90_04380 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CFM90_04380 IPR027268 Peptidase M4/M1, CTD superfamily CFM90_04390 IPR036291 NAD(P)-binding domain superfamily CFM90_04390 IPR015884 Malic enzyme, conserved site CFM90_04390 IPR042112 Phosphate acetyltransferase, domain 2 CFM90_04390 IPR012301 Malic enzyme, N-terminal domain CFM90_04390 IPR037062 Malic enzyme, N-terminal domain superfamily CFM90_04390 IPR012302 Malic enzyme, NAD-binding CFM90_04390 IPR012188 NAD(P)-dependent malic enzyme CFM90_04390 IPR042113 Phosphate acetyltransferase, domain 1 CFM90_04390 IPR002505 Phosphate acetyl/butaryl transferase CFM90_04400 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily CFM90_04400 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase CFM90_04400 IPR019842 Uricase, conserved site CFM90_04400 IPR002042 Uricase CFM90_04400 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 CFM90_04410 IPR032466 Metal-dependent hydrolase CFM90_04410 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFM90_04410 IPR006680 Amidohydrolase-related CFM90_04415 IPR006043 Xanthine/uracil/vitamin C permease CFM90_04415 IPR006042 Xanthine/uracil permease CFM90_04415 IPR017588 Uric acid permease UacT-like CFM90_04425 IPR014306 Hydroxyisourate hydrolase CFM90_04425 IPR000895 Transthyretin/hydroxyisourate hydrolase CFM90_04425 IPR023416 Transthyretin/hydroxyisourate hydrolase domain CFM90_04425 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily CFM90_04425 IPR023419 Transthyretin, conserved site CFM90_04425 IPR023418 Transthyretin, thyroxine binding site CFM90_04440 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_04440 IPR006076 FAD dependent oxidoreductase CFM90_04445 IPR036259 MFS transporter superfamily CFM90_04445 IPR020846 Major facilitator superfamily domain CFM90_04445 IPR005828 Major facilitator, sugar transporter-like CFM90_04450 IPR020625 Schiff base-forming aldolase, active site CFM90_04450 IPR013785 Aldolase-type TIM barrel CFM90_04450 IPR002220 DapA-like CFM90_04450 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CFM90_04450 IPR020624 Schiff base-forming aldolase, conserved site CFM90_04455 IPR015590 Aldehyde dehydrogenase domain CFM90_04455 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFM90_04455 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_04455 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_04455 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_04455 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_04460 IPR000620 EamA domain CFM90_04465 IPR001702 Porin, Gram-negative type CFM90_04465 IPR023614 Porin domain superfamily CFM90_04465 IPR033900 Porin domain, Gram-negative type CFM90_04465 IPR002299 Porin, Neisseria sp. type CFM90_04475 IPR003593 AAA+ ATPase domain CFM90_04475 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFM90_04475 IPR017871 ABC transporter, conserved site CFM90_04475 IPR003439 ABC transporter-like CFM90_04475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_04480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_04480 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFM90_04480 IPR035906 MetI-like superfamily CFM90_04485 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFM90_04485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_04485 IPR035906 MetI-like superfamily CFM90_04495 IPR036390 Winged helix DNA-binding domain superfamily CFM90_04495 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_04495 IPR011711 GntR, C-terminal CFM90_04495 IPR008920 Transcription regulator FadR/GntR, C-terminal CFM90_04495 IPR000524 Transcription regulator HTH, GntR CFM90_04510 IPR001727 Gdt1 family CFM90_04515 IPR032466 Metal-dependent hydrolase CFM90_04515 IPR006680 Amidohydrolase-related CFM90_04515 IPR014311 Guanine deaminase CFM90_04515 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFM90_04520 IPR001365 Adenosine/AMP deaminase domain CFM90_04520 IPR028892 Adenine deaminase type 2 CFM90_04520 IPR006330 Adenosine/adenine deaminase CFM90_04520 IPR032466 Metal-dependent hydrolase CFM90_04530 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CFM90_04530 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CFM90_04530 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CFM90_04530 IPR017609 Xanthine dehydrogenase D subunit CFM90_04530 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CFM90_04535 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CFM90_04535 IPR012675 Beta-grasp domain superfamily CFM90_04535 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CFM90_04535 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_04535 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_04535 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CFM90_04535 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CFM90_04535 IPR036884 [2Fe-2S]-binding domain superfamily CFM90_04535 IPR002888 [2Fe-2S]-binding CFM90_04535 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CFM90_04540 IPR005119 LysR, substrate-binding CFM90_04540 IPR036390 Winged helix DNA-binding domain superfamily CFM90_04540 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_04540 IPR000847 Transcription regulator HTH, LysR CFM90_04545 IPR024370 PBP domain CFM90_04555 IPR038766 Membrane component of ABC transporter, predicted CFM90_04575 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CFM90_04575 IPR031100 LOG family CFM90_04580 IPR013570 Transcription regulator YsiA, C-terminal CFM90_04580 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CFM90_04580 IPR009057 Homeobox-like domain superfamily CFM90_04580 IPR001647 DNA-binding HTH domain, TetR-type CFM90_04585 IPR000829 DAGK family CFM90_04585 IPR033718 Diacylglycerol kinase, prokaryotic CFM90_04585 IPR036945 Diacylglycerol kinase (DAGK) superfamily CFM90_04590 IPR001296 Glycosyl transferase, family 1 CFM90_04590 IPR017814 Mycothiol biosynthesis protein, MshA CFM90_04590 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFM90_04625 IPR029035 DHS-like NAD/FAD-binding domain superfamily CFM90_04625 IPR012846 Acetolactate synthase, large subunit, biosynthetic CFM90_04625 IPR039368 Acetolactate synthase large subunit, TPP binding domain CFM90_04625 IPR029061 Thiamin diphosphate-binding fold CFM90_04625 IPR012000 Thiamine pyrophosphate enzyme, central domain CFM90_04625 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CFM90_04625 IPR000399 TPP-binding enzyme, conserved site CFM90_04625 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CFM90_04630 IPR039557 AHAS, ACT domain CFM90_04630 IPR002912 ACT domain CFM90_04630 IPR019455 Acetolactate synthase, small subunit, C-terminal CFM90_04630 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CFM90_04630 IPR004789 Acetolactate synthase, small subunit CFM90_04635 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_04635 IPR014359 Ketol-acid reductoisomerase, prokaryotic CFM90_04635 IPR000506 Ketol-acid reductoisomerase, C-terminal CFM90_04635 IPR013116 Ketol-acid reductoisomerase, N-terminal CFM90_04635 IPR013023 Ketol-acid reductoisomerase CFM90_04635 IPR036291 NAD(P)-binding domain superfamily CFM90_04640 IPR033175 Phosphatidylserine decarboxylase, archaeal-type CFM90_04640 IPR003817 Phosphatidylserine decarboxylase-related CFM90_04645 IPR000462 CDP-alcohol phosphatidyltransferase CFM90_04645 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CFM90_04650 IPR013785 Aldolase-type TIM barrel CFM90_04650 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CFM90_04650 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CFM90_04650 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CFM90_04650 IPR005671 2-isopropylmalate synthase, bacterial-type CFM90_04650 IPR000891 Pyruvate carboxyltransferase CFM90_04660 IPR028082 Periplasmic binding protein-like I CFM90_04660 IPR000709 Leu/Ile/Val-binding protein CFM90_04660 IPR028081 Leucine-binding protein domain CFM90_04665 IPR009068 S15/NS1, RNA-binding CFM90_04665 IPR000589 Ribosomal protein S15 CFM90_04665 IPR005290 Ribosomal protein S15, bacterial-type CFM90_04670 IPR036612 K Homology domain, type 1 superfamily CFM90_04670 IPR004087 K Homology domain CFM90_04670 IPR036345 Exoribonuclease, PH domain 2 superfamily CFM90_04670 IPR012340 Nucleic acid-binding, OB-fold CFM90_04670 IPR012162 Polyribonucleotide nucleotidyltransferase CFM90_04670 IPR015847 Exoribonuclease, phosphorolytic domain 2 CFM90_04670 IPR001247 Exoribonuclease, phosphorolytic domain 1 CFM90_04670 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CFM90_04670 IPR027408 PNPase/RNase PH domain superfamily CFM90_04670 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily CFM90_04670 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_04670 IPR003029 S1 domain CFM90_04670 IPR004088 K Homology domain, type 1 CFM90_04670 IPR022967 RNA-binding domain, S1 CFM90_04675 IPR023214 HAD superfamily CFM90_04675 IPR036412 HAD-like superfamily CFM90_04685 IPR035990 Triosephosphate isomerase superfamily CFM90_04685 IPR020861 Triosephosphate isomerase, active site CFM90_04685 IPR013785 Aldolase-type TIM barrel CFM90_04685 IPR000652 Triosephosphate isomerase CFM90_04685 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CFM90_04690 IPR004692 Preprotein translocase SecG subunit CFM90_04700 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CFM90_04700 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CFM90_04700 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily CFM90_04705 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CFM90_04705 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CFM90_04710 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CFM90_04710 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site CFM90_04710 IPR010218 NADH dehydrogenase, subunit C CFM90_04710 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CFM90_04715 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CFM90_04715 IPR029014 [NiFe]-hydrogenase, large subunit CFM90_04715 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CFM90_04715 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CFM90_04715 IPR001135 NADH-quinone oxidoreductase, subunit D CFM90_04720 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CFM90_04720 IPR042128 NuoE domain CFM90_04720 IPR002023 NADH-quinone oxidoreductase subunit E-like CFM90_04720 IPR036249 Thioredoxin-like superfamily CFM90_04725 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CFM90_04725 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CFM90_04725 IPR019554 Soluble ligand binding domain CFM90_04725 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CFM90_04725 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CFM90_04725 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CFM90_04725 IPR011537 NADH ubiquinone oxidoreductase, F subunit CFM90_04730 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_04730 IPR006656 Molybdopterin oxidoreductase CFM90_04730 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_04730 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CFM90_04730 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal CFM90_04730 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CFM90_04730 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CFM90_04730 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CFM90_04735 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CFM90_04735 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CFM90_04740 IPR010226 NADH-quinone oxidoreductase, chain I CFM90_04740 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_04740 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_04745 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ CFM90_04745 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CFM90_04750 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CFM90_04750 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CFM90_04755 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CFM90_04755 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CFM90_04755 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CFM90_04755 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CFM90_04760 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CFM90_04760 IPR010227 NADH-quinone oxidoreductase, chain M/4 CFM90_04760 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal CFM90_04760 IPR003918 NADH:ubiquinone oxidoreductase CFM90_04765 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CFM90_04765 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CFM90_04785 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_04785 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_04785 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_04785 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_04785 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_04785 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_04790 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_04790 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_04790 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_04790 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_04790 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_04790 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_04795 IPR029069 HotDog domain superfamily CFM90_04795 IPR011966 Phenylacetic acid degradation protein PaaN CFM90_04795 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_04795 IPR015590 Aldehyde dehydrogenase domain CFM90_04795 IPR002539 MaoC-like dehydratase domain CFM90_04795 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_04795 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_04810 IPR001851 ABC transporter, permease CFM90_04815 IPR001851 ABC transporter, permease CFM90_04820 IPR017871 ABC transporter, conserved site CFM90_04820 IPR003439 ABC transporter-like CFM90_04820 IPR003593 AAA+ ATPase domain CFM90_04820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_04820 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFM90_04825 IPR003593 AAA+ ATPase domain CFM90_04825 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CFM90_04825 IPR003439 ABC transporter-like CFM90_04825 IPR017871 ABC transporter, conserved site CFM90_04825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_04830 IPR002669 Urease accessory protein UreD CFM90_04835 IPR036463 Urease, gamma subunit superfamily CFM90_04835 IPR002026 Urease, gamma/gamma-beta subunit CFM90_04835 IPR012010 Urease, gamma subunit CFM90_04840 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein CFM90_04845 IPR002019 Urease, beta subunit CFM90_04845 IPR036461 Urease, beta subunit superfamily CFM90_04850 IPR032466 Metal-dependent hydrolase CFM90_04850 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFM90_04850 IPR006680 Amidohydrolase-related CFM90_04850 IPR017950 Urease active site CFM90_04850 IPR005848 Urease, alpha subunit CFM90_04850 IPR017951 Urease alpha subunit, C-terminal CFM90_04850 IPR011612 Urease alpha-subunit, N-terminal domain CFM90_04850 IPR029754 Urease nickel binding site CFM90_04855 IPR004029 UreE urease accessory, N-terminal CFM90_04855 IPR012406 Urease accessory protein UreE CFM90_04855 IPR007864 Urease accessory protein UreE, C-terminal domain CFM90_04855 IPR036675 UreE, C-terminal domain superfamily CFM90_04855 IPR036118 UreE urease accessory, N-terminal domain superfamily CFM90_04860 IPR002639 Urease accessory protein UreF CFM90_04860 IPR038277 UreF domain superfamily CFM90_04865 IPR004400 Urease accessory protein UreG CFM90_04865 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CFM90_04865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_04890 IPR004046 Glutathione S-transferase, C-terminal CFM90_04890 IPR004045 Glutathione S-transferase, N-terminal CFM90_04890 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_04890 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_04890 IPR036249 Thioredoxin-like superfamily CFM90_04895 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_04895 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_04895 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_04895 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_04895 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_04895 IPR006089 Acyl-CoA dehydrogenase, conserved site CFM90_04895 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_04905 IPR036390 Winged helix DNA-binding domain superfamily CFM90_04905 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_04905 IPR000847 Transcription regulator HTH, LysR CFM90_04905 IPR005119 LysR, substrate-binding CFM90_04925 IPR029045 ClpP/crotonase-like domain superfamily CFM90_04925 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_04925 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_04925 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB CFM90_04930 IPR036291 NAD(P)-binding domain superfamily CFM90_04930 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_04930 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CFM90_04930 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CFM90_04930 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC CFM90_04930 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CFM90_04930 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CFM90_04935 IPR004045 Glutathione S-transferase, N-terminal CFM90_04935 IPR036249 Thioredoxin-like superfamily CFM90_04935 IPR004046 Glutathione S-transferase, C-terminal CFM90_04935 IPR040079 Glutathione Transferase family CFM90_04935 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_04935 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_04940 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_04940 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_04940 IPR004839 Aminotransferase, class I/classII CFM90_04940 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_04950 IPR005583 Peroxide stress protein YaaA CFM90_04955 IPR040626 Cytosolic carboxypeptidase, N-terminal CFM90_04955 IPR000834 Peptidase M14, carboxypeptidase A CFM90_04965 IPR000914 Solute-binding protein family 5 domain CFM90_04965 IPR039424 Solute-binding protein family 5 CFM90_04965 IPR023765 Solute-binding protein family 5, conserved site CFM90_04965 IPR030678 Peptide/nickel binding protein, MppA-type CFM90_04980 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CFM90_04980 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CFM90_04980 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CFM90_04980 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFM90_04980 IPR018136 Aconitase family, 4Fe-4S cluster binding site CFM90_04980 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CFM90_04980 IPR036008 Aconitase, iron-sulfur domain CFM90_04985 IPR042188 MmgE/PrpD superfamily, domain 2 CFM90_04985 IPR042183 MmgE/PrpD superfamily, domain 1 CFM90_04985 IPR012705 2-methylcitrate dehydratase PrpD CFM90_04985 IPR005656 MmgE/PrpD CFM90_04985 IPR036148 MmgE/PrpD superfamily CFM90_04995 IPR012695 2-methylisocitrate lyase CFM90_04995 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CFM90_04995 IPR040442 Pyruvate kinase-like domain superfamily CFM90_04995 IPR039556 ICL/PEPM domain CFM90_04995 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_05005 IPR001557 L-lactate/malate dehydrogenase CFM90_05005 IPR036291 NAD(P)-binding domain superfamily CFM90_05005 IPR022383 Lactate/malate dehydrogenase, C-terminal CFM90_05005 IPR001236 Lactate/malate dehydrogenase, N-terminal CFM90_05005 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CFM90_05005 IPR010945 Malate dehydrogenase, type 2 CFM90_05010 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_05010 IPR004839 Aminotransferase, class I/classII CFM90_05010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_05010 IPR000524 Transcription regulator HTH, GntR CFM90_05010 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_05010 IPR036390 Winged helix DNA-binding domain superfamily CFM90_05020 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CFM90_05020 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor CFM90_05020 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CFM90_05025 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CFM90_05025 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CFM90_05025 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CFM90_05025 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CFM90_05025 IPR011281 Succinate dehydrogenase, flavoprotein subunit CFM90_05025 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CFM90_05025 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CFM90_05025 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_05030 IPR012675 Beta-grasp domain superfamily CFM90_05030 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CFM90_05030 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CFM90_05030 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_05030 IPR009051 Alpha-helical ferredoxin CFM90_05030 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_05030 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_05030 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_05035 IPR036714 Flavinator of succinate dehydrogenase superfamily CFM90_05035 IPR005631 Flavinator of succinate dehydrogenase CFM90_05040 IPR016142 Citrate synthase-like, large alpha subdomain CFM90_05040 IPR036969 Citrate synthase superfamily CFM90_05040 IPR024176 Citrate synthase, bacterial-type CFM90_05040 IPR010953 Citrate synthase, type I CFM90_05040 IPR019810 Citrate synthase active site CFM90_05040 IPR002020 Citrate synthase CFM90_05040 IPR016143 Citrate synthase-like, small alpha subdomain CFM90_05045 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CFM90_05045 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CFM90_05045 IPR018136 Aconitase family, 4Fe-4S cluster binding site CFM90_05045 IPR036008 Aconitase, iron-sulfur domain CFM90_05045 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CFM90_05045 IPR004430 3-isopropylmalate dehydratase, large subunit CFM90_05050 IPR004431 3-isopropylmalate dehydratase, small subunit CFM90_05050 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFM90_05050 IPR033940 3-isopropylmalate dehydratase, swivel domain CFM90_05050 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CFM90_05055 IPR024084 Isopropylmalate dehydrogenase-like domain CFM90_05055 IPR004429 Isopropylmalate dehydrogenase CFM90_05055 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CFM90_05060 IPR012080 Aspartate-semialdehyde dehydrogenase CFM90_05060 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CFM90_05060 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type CFM90_05060 IPR036291 NAD(P)-binding domain superfamily CFM90_05060 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CFM90_05060 IPR000534 Semialdehyde dehydrogenase, NAD-binding CFM90_05070 IPR020095 Pseudouridine synthase I, TruA, C-terminal CFM90_05070 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFM90_05070 IPR001406 Pseudouridine synthase I, TruA CFM90_05070 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CFM90_05075 IPR013785 Aldolase-type TIM barrel CFM90_05075 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CFM90_05075 IPR011060 Ribulose-phosphate binding barrel CFM90_05080 IPR006654 Tryptophan synthase, beta chain CFM90_05080 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_05080 IPR006653 Tryptophan synthase, beta chain, conserved site CFM90_05080 IPR023026 Tryptophan synthase beta chain/beta chain-like CFM90_05080 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_05085 IPR001091 Restriction/modification DNA-methylase CFM90_05085 IPR002941 DNA methylase N-4/N-6 CFM90_05085 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFM90_05085 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_05090 IPR002028 Tryptophan synthase, alpha chain CFM90_05090 IPR011060 Ribulose-phosphate binding barrel CFM90_05090 IPR013785 Aldolase-type TIM barrel CFM90_05090 IPR018204 Tryptophan synthase, alpha chain, active site CFM90_05095 IPR029045 ClpP/crotonase-like domain superfamily CFM90_05095 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CFM90_05095 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CFM90_05095 IPR041010 Acetyl-coA carboxylase zinc finger domain CFM90_05095 IPR034733 Acetyl-CoA carboxylase CFM90_05100 IPR004101 Mur ligase, C-terminal CFM90_05100 IPR036565 Mur-like, catalytic domain superfamily CFM90_05100 IPR001645 Folylpolyglutamate synthetase CFM90_05100 IPR013221 Mur ligase, central CFM90_05100 IPR036615 Mur ligase, C-terminal domain superfamily CFM90_05100 IPR018109 Folylpolyglutamate synthetase, conserved site CFM90_05115 IPR029057 Phosphoribosyltransferase-like CFM90_05115 IPR035584 Amidophosphoribosyltransferase, N-terminal CFM90_05115 IPR005854 Amidophosphoribosyltransferase CFM90_05115 IPR000836 Phosphoribosyltransferase domain CFM90_05115 IPR029055 Nucleophile aminohydrolases, N-terminal CFM90_05115 IPR017932 Glutamine amidotransferase type 2 domain CFM90_05120 IPR000412 ABC-2 transporter CFM90_05120 IPR013525 ABC-2 type transporter CFM90_05120 IPR005981 ABC-2 type transporter, NodJ CFM90_05125 IPR015851 ABC transporter, NodI CFM90_05125 IPR017871 ABC transporter, conserved site CFM90_05125 IPR003439 ABC transporter-like CFM90_05125 IPR005978 Nodulation ABC transporter, NodI CFM90_05125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_05125 IPR003593 AAA+ ATPase domain CFM90_05150 IPR012337 Ribonuclease H-like superfamily CFM90_05150 IPR002559 Transposase, IS4-like CFM90_05150 IPR024473 Transposase, IS4, N-terminal CFM90_05165 IPR038084 GlcG-like domain superfamily CFM90_05165 IPR005624 Haem-degrading CFM90_05175 IPR003400 Biopolymer transport protein ExbD/TolR CFM90_05180 IPR002898 MotA/TolQ/ExbB proton channel CFM90_05190 IPR037219 Peptidase M41-like CFM90_05190 IPR003593 AAA+ ATPase domain CFM90_05190 IPR041569 AAA ATPase, AAA+ lid domain CFM90_05190 IPR003960 ATPase, AAA-type, conserved site CFM90_05190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_05190 IPR005936 Peptidase, FtsH CFM90_05190 IPR003959 ATPase, AAA-type, core CFM90_05190 IPR000642 Peptidase M41 CFM90_05210 IPR023954 C4-dicarboxylate transport protein CFM90_05210 IPR001991 Sodium:dicarboxylate symporter CFM90_05210 IPR018107 Sodium:dicarboxylate symporter, conserved site CFM90_05210 IPR036458 Sodium:dicarboxylate symporter superfamily CFM90_05215 IPR018187 Asp/Glu racemase, active site 1 CFM90_05215 IPR004391 Glutamate racemase CFM90_05215 IPR015942 Asp/Glu/hydantoin racemase CFM90_05215 IPR033134 Asp/Glu racemase, active site 2 CFM90_05215 IPR001920 Asp/Glu racemase CFM90_05225 IPR005134 Uncharacterised protein family UPF0114 CFM90_05225 IPR020761 Uncharacterised protein family UPF0114, bacteria CFM90_05230 IPR000620 EamA domain CFM90_05235 IPR042099 AMP-dependent synthetase-like superfamily CFM90_05235 IPR011904 Acetate-CoA ligase CFM90_05235 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CFM90_05235 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_05235 IPR020845 AMP-binding, conserved site CFM90_05235 IPR000873 AMP-dependent synthetase/ligase CFM90_05240 IPR019899 Sodium/solute symporter, VC2705 subfamily CFM90_05240 IPR001734 Sodium/solute symporter CFM90_05240 IPR038377 Sodium/glucose symporter superfamily CFM90_05250 IPR008490 Transposase InsH, N-terminal CFM90_05250 IPR002559 Transposase, IS4-like CFM90_05260 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CFM90_05260 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_05260 IPR000792 Transcription regulator LuxR, C-terminal CFM90_05260 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_05260 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CFM90_05265 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_05265 IPR004090 Chemotaxis methyl-accepting receptor CFM90_05265 IPR003660 HAMP domain CFM90_05265 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_05265 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_05265 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_05270 IPR011006 CheY-like superfamily CFM90_05270 IPR000160 GGDEF domain CFM90_05270 IPR029787 Nucleotide cyclase CFM90_05270 IPR001789 Signal transduction response regulator, receiver domain CFM90_05285 IPR036884 [2Fe-2S]-binding domain superfamily CFM90_05285 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_05285 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_05285 IPR002888 [2Fe-2S]-binding CFM90_05285 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CFM90_05290 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CFM90_05290 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CFM90_05290 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CFM90_05290 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CFM90_05290 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_05290 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CFM90_05305 IPR030678 Peptide/nickel binding protein, MppA-type CFM90_05305 IPR023765 Solute-binding protein family 5, conserved site CFM90_05305 IPR000914 Solute-binding protein family 5 domain CFM90_05305 IPR039424 Solute-binding protein family 5 CFM90_05310 IPR017871 ABC transporter, conserved site CFM90_05310 IPR003593 AAA+ ATPase domain CFM90_05310 IPR003439 ABC transporter-like CFM90_05310 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CFM90_05310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_05315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_05315 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CFM90_05315 IPR017871 ABC transporter, conserved site CFM90_05315 IPR003593 AAA+ ATPase domain CFM90_05315 IPR003439 ABC transporter-like CFM90_05320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_05320 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CFM90_05320 IPR035906 MetI-like superfamily CFM90_05325 IPR035906 MetI-like superfamily CFM90_05325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_05330 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_05330 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain CFM90_05335 IPR005119 LysR, substrate-binding CFM90_05335 IPR036390 Winged helix DNA-binding domain superfamily CFM90_05335 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_05335 IPR000847 Transcription regulator HTH, LysR CFM90_05335 IPR037415 Octopine catabolism/uptake operon regulatory protein OccR, PBP2 domain CFM90_05370 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CFM90_05370 IPR036477 Formyl transferase, N-terminal domain superfamily CFM90_05370 IPR004810 Formyltetrahydrofolate deformylase CFM90_05370 IPR002376 Formyl transferase, N-terminal CFM90_05370 IPR002912 ACT domain CFM90_05375 IPR006309 DNA polymerase 3, epsilon subunit CFM90_05375 IPR036397 Ribonuclease H superfamily CFM90_05375 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CFM90_05375 IPR013520 Exonuclease, RNase T/DNA polymerase III CFM90_05375 IPR012337 Ribonuclease H-like superfamily CFM90_05385 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CFM90_05385 IPR003346 Transposase, IS116/IS110/IS902 CFM90_05420 IPR023210 NADP-dependent oxidoreductase domain CFM90_05420 IPR018170 Aldo/keto reductase, conserved site CFM90_05420 IPR036812 NADP-dependent oxidoreductase domain superfamily CFM90_05420 IPR020471 Aldo/keto reductase CFM90_05425 IPR008922 Uncharacterised domain, di-copper centre CFM90_05425 IPR002227 Tyrosinase copper-binding domain CFM90_05440 IPR006016 UspA CFM90_05440 IPR006015 Universal stress protein A family CFM90_05440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_05445 IPR036291 NAD(P)-binding domain superfamily CFM90_05445 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 CFM90_05445 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_05445 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CFM90_05445 IPR011032 GroES-like superfamily CFM90_05475 IPR036397 Ribonuclease H superfamily CFM90_05475 IPR012337 Ribonuclease H-like superfamily CFM90_05475 IPR002156 Ribonuclease H domain CFM90_05475 IPR022892 Ribonuclease HI CFM90_05480 IPR026669 Arsenite methyltransferase-like CFM90_05480 IPR013216 Methyltransferase type 11 CFM90_05480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_05485 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CFM90_05485 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CFM90_05485 IPR001279 Metallo-beta-lactamase CFM90_05485 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_05485 IPR017782 Hydroxyacylglutathione hydrolase CFM90_05490 IPR036779 LysM domain superfamily CFM90_05490 IPR018392 LysM domain CFM90_05490 IPR023346 Lysozyme-like domain superfamily CFM90_05490 IPR000189 Prokaryotic transglycosylase, active site CFM90_05490 IPR008258 Transglycosylase SLT domain 1 CFM90_05495 IPR000873 AMP-dependent synthetase/ligase CFM90_05495 IPR042099 AMP-dependent synthetase-like superfamily CFM90_05495 IPR012694 Propionate--CoA ligase CFM90_05495 IPR020845 AMP-binding, conserved site CFM90_05495 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_05495 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CFM90_05500 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CFM90_05500 IPR006274 Carbamoyl-phosphate synthase, small subunit CFM90_05500 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CFM90_05500 IPR029062 Class I glutamine amidotransferase-like CFM90_05500 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CFM90_05500 IPR017926 Glutamine amidotransferase CFM90_05505 IPR001123 Amino acid exporter protein, LeuE-type CFM90_05505 IPR004778 Homoserine/Threonine efflux protein CFM90_05510 IPR011761 ATP-grasp fold CFM90_05510 IPR016185 Pre-ATP-grasp domain superfamily CFM90_05510 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CFM90_05510 IPR011607 Methylglyoxal synthase-like domain CFM90_05510 IPR006275 Carbamoyl-phosphate synthase, large subunit CFM90_05510 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CFM90_05510 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CFM90_05510 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CFM90_05510 IPR036914 Methylglyoxal synthase-like domain superfamily CFM90_05510 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CFM90_05515 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CFM90_05515 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CFM90_05515 IPR023459 Transcription elongation factor GreA/GreB family CFM90_05515 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CFM90_05515 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CFM90_05515 IPR006359 Transcription elongation factor GreA CFM90_05515 IPR028624 Transcription elongation factor GreA/GreB CFM90_05515 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CFM90_05525 IPR017924 RNA-binding protein YhbY CFM90_05525 IPR035920 YhbY-like superfamily CFM90_05525 IPR001890 RNA-binding, CRM domain CFM90_05530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_05530 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CFM90_05530 IPR015507 Ribosomal RNA large subunit methyltransferase E CFM90_05535 IPR003593 AAA+ ATPase domain CFM90_05535 IPR003960 ATPase, AAA-type, conserved site CFM90_05535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_05535 IPR011546 Peptidase M41, FtsH extracellular CFM90_05535 IPR000642 Peptidase M41 CFM90_05535 IPR037219 Peptidase M41-like CFM90_05535 IPR003959 ATPase, AAA-type, core CFM90_05535 IPR005936 Peptidase, FtsH CFM90_05535 IPR041569 AAA ATPase, AAA+ lid domain CFM90_05540 IPR000489 Pterin-binding domain CFM90_05540 IPR011005 Dihydropteroate synthase-like CFM90_05540 IPR006390 Dihydropteroate synthase CFM90_05545 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CFM90_05545 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CFM90_05545 IPR005843 Alpha-D-phosphohexomutase, C-terminal CFM90_05545 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CFM90_05545 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CFM90_05545 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CFM90_05545 IPR016066 Alpha-D-phosphohexomutase, conserved site CFM90_05545 IPR005841 Alpha-D-phosphohexomutase superfamily CFM90_05545 IPR006352 Phosphoglucosamine mutase, bacterial type CFM90_05550 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CFM90_05550 IPR024370 PBP domain CFM90_05555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_05555 IPR011864 Phosphate ABC transporter, permease protein PstC CFM90_05555 IPR035906 MetI-like superfamily CFM90_05560 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_05560 IPR005672 Phosphate transport system permease protein PstA CFM90_05560 IPR035906 MetI-like superfamily CFM90_05565 IPR005670 Phosphate transport system permease protein 1 CFM90_05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_05565 IPR015850 ABC transporter, phosphate import, PstB CFM90_05565 IPR017871 ABC transporter, conserved site CFM90_05565 IPR003439 ABC transporter-like CFM90_05565 IPR003593 AAA+ ATPase domain CFM90_05570 IPR038078 PhoU-like domain superfamily CFM90_05570 IPR028366 Phosphate transport system protein PhoU CFM90_05570 IPR026022 PhoU domain CFM90_05575 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_05575 IPR039420 Transcriptional regulatory protein WalR-like CFM90_05575 IPR001789 Signal transduction response regulator, receiver domain CFM90_05575 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_05575 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CFM90_05575 IPR011006 CheY-like superfamily CFM90_05580 IPR035965 PAS domain superfamily CFM90_05580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_05580 IPR013767 PAS fold CFM90_05580 IPR005467 Histidine kinase domain CFM90_05580 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR CFM90_05580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_05580 IPR021766 Phosphate regulon sensor protein PhoR CFM90_05580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_05580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_05580 IPR000014 PAS domain CFM90_05580 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_05585 IPR041108 Polyphosphate kinase, C-terminal domain 1 CFM90_05585 IPR024953 Polyphosphate kinase middle domain CFM90_05585 IPR036830 Polyphosphate kinase middle domain superfamily CFM90_05585 IPR003414 Polyphosphate kinase CFM90_05585 IPR025200 Polyphosphate kinase C-terminal domain 2 CFM90_05585 IPR025198 Polyphosphate kinase N-terminal domain CFM90_05585 IPR036832 Polyphosphate kinase N-terminal domain superfamily CFM90_05590 IPR022371 Exopolyphosphatase CFM90_05590 IPR030673 Pyrophosphatase, GppA/Ppx-type CFM90_05590 IPR003695 Ppx/GppA phosphatase CFM90_05615 IPR002781 Transmembrane protein TauE-like CFM90_05625 IPR036390 Winged helix DNA-binding domain superfamily CFM90_05625 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_05625 IPR001845 HTH ArsR-type DNA-binding domain CFM90_05625 IPR011991 ArsR-like helix-turn-helix domain CFM90_05630 IPR001279 Metallo-beta-lactamase CFM90_05630 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_05635 IPR035919 EAL domain superfamily CFM90_05635 IPR005330 MHYT domain CFM90_05635 IPR001633 EAL domain CFM90_05635 IPR029787 Nucleotide cyclase CFM90_05635 IPR000014 PAS domain CFM90_05635 IPR035965 PAS domain superfamily CFM90_05635 IPR000160 GGDEF domain CFM90_05645 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_05645 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_05645 IPR005814 Aminotransferase class-III CFM90_05645 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_05650 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_05650 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_05650 IPR005814 Aminotransferase class-III CFM90_05650 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CFM90_05650 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_05695 IPR019888 Transcription regulator AsnC-type CFM90_05695 IPR036390 Winged helix DNA-binding domain superfamily CFM90_05695 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_05695 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_05695 IPR011008 Dimeric alpha-beta barrel CFM90_05695 IPR000485 AsnC-type HTH domain CFM90_05695 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_05695 IPR011991 ArsR-like helix-turn-helix domain CFM90_05710 IPR036291 NAD(P)-binding domain superfamily CFM90_05710 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_05715 IPR009061 Putative DNA-binding domain superfamily CFM90_05715 IPR011794 Hg(II)-responsive transcriptional regulator CFM90_05715 IPR000551 MerR-type HTH domain CFM90_05720 IPR011701 Major facilitator superfamily CFM90_05720 IPR020846 Major facilitator superfamily domain CFM90_05720 IPR036259 MFS transporter superfamily CFM90_05725 IPR011701 Major facilitator superfamily CFM90_05725 IPR020846 Major facilitator superfamily domain CFM90_05725 IPR036259 MFS transporter superfamily CFM90_05730 IPR036390 Winged helix DNA-binding domain superfamily CFM90_05730 IPR000835 MarR-type HTH domain CFM90_05730 IPR023187 Transcriptional regulator MarR-type, conserved site CFM90_05730 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_05795 IPR006094 FAD linked oxidase, N-terminal CFM90_05795 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CFM90_05795 IPR016166 FAD-binding domain, PCMH-type CFM90_05795 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_05795 IPR016164 FAD-linked oxidase-like, C-terminal CFM90_05795 IPR004490 Glycolate oxidase subunit GlcD CFM90_05795 IPR004113 FAD-linked oxidase, C-terminal CFM90_05805 IPR029039 Flavoprotein-like superfamily CFM90_05805 IPR010089 Flavoprotein WrbA-like CFM90_05805 IPR005025 NADPH-dependent FMN reductase-like CFM90_05805 IPR001226 Flavodoxin, conserved site CFM90_05805 IPR008254 Flavodoxin/nitric oxide synthase CFM90_05810 IPR023679 Uncharacterised protein family UPF0761, bacterial CFM90_05810 IPR017039 Virulence factor BrkB CFM90_05825 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_05825 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CFM90_05825 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CFM90_05825 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_05825 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_05835 IPR036259 MFS transporter superfamily CFM90_05835 IPR023727 Lysophospholipid transporter LplT CFM90_05835 IPR011701 Major facilitator superfamily CFM90_05840 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CFM90_05840 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CFM90_05840 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CFM90_05845 IPR020541 Chorismate synthase, conserved site CFM90_05845 IPR000453 Chorismate synthase CFM90_05845 IPR035904 Chorismate synthase AroC superfamily CFM90_05850 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_05850 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase CFM90_05850 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_05855 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_05855 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_05855 IPR036291 NAD(P)-binding domain superfamily CFM90_05860 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_05860 IPR011006 CheY-like superfamily CFM90_05860 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_05860 IPR000792 Transcription regulator LuxR, C-terminal CFM90_05860 IPR001789 Signal transduction response regulator, receiver domain CFM90_05865 IPR004165 Coenzyme A transferase family I CFM90_05865 IPR004163 Coenzyme A transferase binding site CFM90_05865 IPR037171 NagB/RpiA transferase-like CFM90_05865 IPR012792 3-oxoacid CoA-transferase, subunit A CFM90_05870 IPR004165 Coenzyme A transferase family I CFM90_05870 IPR037171 NagB/RpiA transferase-like CFM90_05870 IPR012791 3-oxoacid CoA-transferase, subunit B CFM90_05870 IPR004164 Coenzyme A transferase active site CFM90_05875 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_05875 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_05875 IPR036291 NAD(P)-binding domain superfamily CFM90_05875 IPR011294 3-hydroxybutyrate dehydrogenase CFM90_05885 IPR019897 RidA, conserved site CFM90_05885 IPR035959 RutC-like superfamily CFM90_05885 IPR006175 YjgF/YER057c/UK114 family CFM90_05885 IPR035709 RutC family, YoaB-like CFM90_05890 IPR012675 Beta-grasp domain superfamily CFM90_05890 IPR004811 RelA/SpoT family CFM90_05890 IPR007685 RelA/SpoT CFM90_05890 IPR003607 HD/PDEase domain CFM90_05890 IPR002912 ACT domain CFM90_05890 IPR033655 RelA, TGS domain CFM90_05890 IPR004095 TGS CFM90_05890 IPR012676 TGS-like CFM90_05900 IPR004154 Anticodon-binding CFM90_05900 IPR036621 Anticodon-binding domain superfamily CFM90_05900 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CFM90_05900 IPR033728 Threonine-tRNA ligase catalytic core domain CFM90_05900 IPR006195 Aminoacyl-tRNA synthetase, class II CFM90_05900 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CFM90_05900 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CFM90_05900 IPR002320 Threonine-tRNA ligase, class IIa CFM90_05900 IPR012676 TGS-like CFM90_05900 IPR004095 TGS CFM90_05900 IPR012675 Beta-grasp domain superfamily CFM90_05905 IPR001288 Translation initiation factor 3 CFM90_05905 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CFM90_05905 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CFM90_05905 IPR019813 Translation initiation factor 3, conserved site CFM90_05905 IPR019814 Translation initiation factor 3, N-terminal CFM90_05905 IPR019815 Translation initiation factor 3, C-terminal CFM90_05910 IPR037229 Ribosomal protein L35 superfamily CFM90_05910 IPR021137 Ribosomal protein L35 CFM90_05910 IPR018265 Ribosomal protein L35, conserved site CFM90_05910 IPR001706 Ribosomal protein L35, non-mitochondrial CFM90_05915 IPR005813 Ribosomal protein L20 CFM90_05915 IPR035566 Ribosomal protein L20, C-terminal CFM90_05920 IPR006195 Aminoacyl-tRNA synthetase, class II CFM90_05920 IPR002319 Phenylalanyl-tRNA synthetase CFM90_05920 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CFM90_05920 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CFM90_05920 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CFM90_05920 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CFM90_05925 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CFM90_05925 IPR002547 tRNA-binding domain CFM90_05925 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CFM90_05925 IPR009061 Putative DNA-binding domain superfamily CFM90_05925 IPR012340 Nucleic acid-binding, OB-fold CFM90_05925 IPR005147 tRNA synthetase, B5-domain CFM90_05925 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CFM90_05925 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CFM90_05925 IPR005146 B3/B4 tRNA-binding domain CFM90_05925 IPR005121 Ferrodoxin-fold anticodon-binding domain CFM90_05925 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CFM90_05930 IPR005684 Integration host factor, alpha subunit CFM90_05930 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CFM90_05930 IPR020816 Histone-like DNA-binding protein, conserved site CFM90_05930 IPR000119 Histone-like DNA-binding protein CFM90_05960 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CFM90_05960 IPR017961 DNA polymerase, Y-family, little finger domain CFM90_05960 IPR022880 DNA polymerase IV CFM90_05960 IPR001126 UmuC domain CFM90_05965 IPR004758 Amino acid transporter CFM90_05965 IPR002293 Amino acid/polyamine transporter I CFM90_05980 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CFM90_05980 IPR040442 Pyruvate kinase-like domain superfamily CFM90_05980 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase CFM90_05980 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_05980 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales CFM90_05985 IPR012712 HTH-type transcriptional regulator HpaR/FarR CFM90_05985 IPR023187 Transcriptional regulator MarR-type, conserved site CFM90_05985 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_05985 IPR036390 Winged helix DNA-binding domain superfamily CFM90_05985 IPR000835 MarR-type HTH domain CFM90_05995 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFM90_05995 IPR032466 Metal-dependent hydrolase CFM90_05995 IPR013108 Amidohydrolase 3 CFM90_06000 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CFM90_06000 IPR001567 Peptidase M3A/M3B catalytic domain CFM90_06005 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CFM90_06005 IPR036291 NAD(P)-binding domain superfamily CFM90_06005 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CFM90_06005 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CFM90_06005 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CFM90_06010 IPR000792 Transcription regulator LuxR, C-terminal CFM90_06010 IPR001789 Signal transduction response regulator, receiver domain CFM90_06010 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_06010 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_06010 IPR011006 CheY-like superfamily CFM90_06015 IPR000700 PAS-associated, C-terminal CFM90_06015 IPR013767 PAS fold CFM90_06015 IPR000014 PAS domain CFM90_06015 IPR001610 PAC motif CFM90_06015 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_06015 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_06015 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_06015 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_06015 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_06015 IPR035965 PAS domain superfamily CFM90_06015 IPR005467 Histidine kinase domain CFM90_06025 IPR005474 Transketolase, N-terminal CFM90_06025 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CFM90_06025 IPR029061 Thiamin diphosphate-binding fold CFM90_06025 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CFM90_06025 IPR004660 Pyruvate dehydrogenase E1 component CFM90_06025 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CFM90_06030 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CFM90_06030 IPR004167 Peripheral subunit-binding domain CFM90_06030 IPR000089 Biotin/lipoyl attachment CFM90_06030 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CFM90_06030 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CFM90_06030 IPR036625 E3-binding domain superfamily CFM90_06030 IPR011053 Single hybrid motif CFM90_06030 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CFM90_06040 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CFM90_06040 IPR006258 Dihydrolipoamide dehydrogenase CFM90_06040 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CFM90_06040 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_06040 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFM90_06040 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CFM90_06040 IPR023753 FAD/NAD(P)-binding domain CFM90_06050 IPR018968 Phasin CFM90_06055 IPR023801 Histone deacetylase domain CFM90_06055 IPR037138 Histone deacetylase domain superfamily CFM90_06055 IPR023696 Ureohydrolase domain superfamily CFM90_06055 IPR000286 Histone deacetylase family CFM90_06075 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CFM90_06075 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CFM90_06075 IPR012338 Beta-lactamase/transpeptidase-like CFM90_06080 IPR014757 Transcription regulator IclR, C-terminal CFM90_06080 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_06080 IPR036390 Winged helix DNA-binding domain superfamily CFM90_06080 IPR029016 GAF-like domain superfamily CFM90_06080 IPR005471 Transcription regulator IclR, N-terminal CFM90_06085 IPR004017 Cysteine-rich domain CFM90_06085 IPR022822 Lactate utilization protein A CFM90_06090 IPR037171 NagB/RpiA transferase-like CFM90_06090 IPR003741 LUD domain CFM90_06090 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_06090 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_06090 IPR024569 4Fe-4S binding protein, C-terminal CFM90_06090 IPR004452 4Fe-4S binding protein CFM90_06090 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CFM90_06090 IPR009051 Alpha-helical ferredoxin CFM90_06090 IPR022825 Lactate utilization protein B CFM90_06105 IPR007471 N-end aminoacyl transferase, N-terminal CFM90_06105 IPR007472 N-end rule aminoacyl transferase, C-terminal CFM90_06105 IPR017138 Aspartate/glutamate leucyltransferase CFM90_06105 IPR016181 Acyl-CoA N-acyltransferase CFM90_06105 IPR030700 N-end rule aminoacyl transferase CFM90_06110 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CFM90_06110 IPR016181 Acyl-CoA N-acyltransferase CFM90_06110 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal CFM90_06130 IPR005719 Dihydroorotate dehydrogenase, class 2 CFM90_06130 IPR005720 Dihydroorotate dehydrogenase domain CFM90_06130 IPR013785 Aldolase-type TIM barrel CFM90_06130 IPR001295 Dihydroorotate dehydrogenase, conserved site CFM90_06130 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CFM90_06140 IPR003855 Potassium transporter CFM90_06140 IPR023051 Potassium uptake protein, low affinity, Kup CFM90_06150 IPR012340 Nucleic acid-binding, OB-fold CFM90_06150 IPR012337 Ribonuclease H-like superfamily CFM90_06150 IPR010994 RuvA domain 2-like CFM90_06150 IPR022967 RNA-binding domain, S1 CFM90_06150 IPR003029 S1 domain CFM90_06150 IPR018974 Tex-like protein, N-terminal CFM90_06150 IPR023319 Tex-like protein, HTH domain superfamily CFM90_06150 IPR032639 Tex protein, YqgF-like domain CFM90_06150 IPR006641 YqgF/RNase H-like domain CFM90_06150 IPR037027 YqgF/RNase H-like domain superfamily CFM90_06150 IPR041692 HHH domain 9 CFM90_06150 IPR023323 Tex-like domain superfamily CFM90_06165 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CFM90_06165 IPR006555 ATP-dependent helicase, C-terminal CFM90_06165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06165 IPR006935 Helicase/UvrB, N-terminal CFM90_06165 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_06170 IPR017689 Outer membrane protein assembly factor BamD CFM90_06170 IPR039565 Outer membrane lipoprotein BamD-like CFM90_06170 IPR011990 Tetratricopeptide-like helical domain superfamily CFM90_06175 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CFM90_06175 IPR006225 Pseudouridine synthase, RluC/RluD CFM90_06175 IPR036986 RNA-binding S4 domain superfamily CFM90_06175 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFM90_06175 IPR006145 Pseudouridine synthase, RsuA/RluA CFM90_06175 IPR002942 RNA-binding S4 domain CFM90_06190 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain CFM90_06190 IPR029058 Alpha/Beta hydrolase fold CFM90_06190 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I CFM90_06195 IPR020613 Thiolase, conserved site CFM90_06195 IPR020617 Thiolase, C-terminal CFM90_06195 IPR020610 Thiolase, active site CFM90_06195 IPR020615 Thiolase, acyl-enzyme intermediate active site CFM90_06195 IPR016039 Thiolase-like CFM90_06195 IPR002155 Thiolase CFM90_06195 IPR020616 Thiolase, N-terminal CFM90_06200 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_06200 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_06200 IPR036291 NAD(P)-binding domain superfamily CFM90_06200 IPR011283 Acetoacetyl-CoA reductase CFM90_06205 IPR007897 PHB accumulation regulatory CFM90_06205 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR CFM90_06205 IPR012909 PHA accumulation regulator DNA-binding, N-terminal CFM90_06210 IPR013785 Aldolase-type TIM barrel CFM90_06210 IPR035587 DUS-like, FMN-binding domain CFM90_06210 IPR032886 tRNA-dihydrouridine(16) synthase CFM90_06210 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal CFM90_06210 IPR001269 tRNA-dihydrouridine synthase CFM90_06210 IPR018517 tRNA-dihydrouridine synthase, conserved site CFM90_06215 IPR013848 Methylthiotransferase, N-terminal CFM90_06215 IPR006638 Elp3/MiaB/NifB CFM90_06215 IPR005839 Methylthiotransferase CFM90_06215 IPR020612 Methylthiotransferase, conserved site CFM90_06215 IPR038135 Methylthiotransferase, N-terminal domain superfamily CFM90_06215 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CFM90_06215 IPR041582 RimO, TRAM domain CFM90_06215 IPR023404 Radical SAM, alpha/beta horseshoe CFM90_06215 IPR002792 TRAM domain CFM90_06215 IPR007197 Radical SAM CFM90_06220 IPR020616 Thiolase, N-terminal CFM90_06220 IPR020617 Thiolase, C-terminal CFM90_06220 IPR020610 Thiolase, active site CFM90_06220 IPR020615 Thiolase, acyl-enzyme intermediate active site CFM90_06220 IPR016039 Thiolase-like CFM90_06220 IPR002155 Thiolase CFM90_06230 IPR006233 Cystathionine beta-lyase, bacterial CFM90_06230 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CFM90_06230 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_06230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_06230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_06235 IPR023214 HAD superfamily CFM90_06235 IPR036412 HAD-like superfamily CFM90_06240 IPR011650 Peptidase M20, dimerisation domain CFM90_06240 IPR002933 Peptidase M20 CFM90_06240 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_06240 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CFM90_06240 IPR010169 Acetylornithine deacetylase ArgE CFM90_06245 IPR036101 CarD-like/TRCF domain superfamily CFM90_06245 IPR005118 Transcription-repair-coupling factor, C-terminal domain CFM90_06245 IPR011545 DEAD/DEAH box helicase domain CFM90_06245 IPR003711 CarD-like/TRCF domain CFM90_06245 IPR041471 UvrB, interaction domain CFM90_06245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06245 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_06245 IPR001650 Helicase, C-terminal CFM90_06245 IPR004576 Transcription-repair coupling factor CFM90_06245 IPR037235 TRCF-like, C-terminal domain CFM90_06250 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CFM90_06250 IPR034683 Cytidylyltransferase IspD/TarI CFM90_06250 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CFM90_06250 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_06255 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CFM90_06255 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CFM90_06255 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CFM90_06260 IPR004675 Alkylhydroperoxidase AhpD core CFM90_06260 IPR004674 Alkylhydroperoxidase AhpD CFM90_06260 IPR029032 AhpD-like CFM90_06260 IPR003779 Carboxymuconolactone decarboxylase-like CFM90_06265 IPR036249 Thioredoxin-like superfamily CFM90_06265 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CFM90_06265 IPR024706 Peroxiredoxin, AhpC-type CFM90_06265 IPR013766 Thioredoxin domain CFM90_06270 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_06270 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_06270 IPR003660 HAMP domain CFM90_06270 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_06270 IPR005467 Histidine kinase domain CFM90_06270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_06270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_06275 IPR011006 CheY-like superfamily CFM90_06275 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_06275 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_06275 IPR001789 Signal transduction response regulator, receiver domain CFM90_06275 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_06275 IPR039420 Transcriptional regulatory protein WalR-like CFM90_06295 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head CFM90_06295 IPR019845 Squalene/phytoene synthase, conserved site CFM90_06295 IPR008949 Isoprenoid synthase domain superfamily CFM90_06300 IPR006143 RND efflux pump, membrane fusion protein CFM90_06300 IPR030190 Macrolide export protein MacA CFM90_06300 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFM90_06305 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_06305 IPR001036 Acriflavin resistance protein CFM90_06320 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_06320 IPR008471 MnmC-like methyltransferase CFM90_06320 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CFM90_06320 IPR006076 FAD dependent oxidoreductase CFM90_06320 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CFM90_06325 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CFM90_06325 IPR008881 Trigger factor, ribosome-binding, bacterial CFM90_06325 IPR036611 Trigger factor ribosome-binding domain superfamily CFM90_06325 IPR037041 Trigger factor, C-terminal domain superfamily CFM90_06325 IPR008880 Trigger factor, C-terminal CFM90_06325 IPR005215 Trigger factor CFM90_06325 IPR027304 Trigger factor/SurA domain superfamily CFM90_06330 IPR033135 ClpP, histidine active site CFM90_06330 IPR018215 ClpP, Ser active site CFM90_06330 IPR001907 ATP-dependent Clp protease proteolytic subunit CFM90_06330 IPR029045 ClpP/crotonase-like domain superfamily CFM90_06330 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CFM90_06335 IPR003959 ATPase, AAA-type, core CFM90_06335 IPR004487 Clp protease, ATP-binding subunit ClpX CFM90_06335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06335 IPR010603 Zinc finger, ClpX C4-type CFM90_06335 IPR038366 Zinc finger, ClpX C4-type superfamily CFM90_06335 IPR003593 AAA+ ATPase domain CFM90_06335 IPR019489 Clp ATPase, C-terminal CFM90_06340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06340 IPR003593 AAA+ ATPase domain CFM90_06340 IPR003959 ATPase, AAA-type, core CFM90_06340 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_06340 IPR027543 Lon protease, bacterial CFM90_06340 IPR004815 Lon protease, bacterial/eukaryotic-type CFM90_06340 IPR008269 Peptidase S16, Lon proteolytic domain CFM90_06340 IPR027065 Lon protease CFM90_06340 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_06340 IPR015947 PUA-like superfamily CFM90_06340 IPR008268 Peptidase S16, active site CFM90_06340 IPR003111 Lon, substrate-binding domain CFM90_06345 IPR000119 Histone-like DNA-binding protein CFM90_06345 IPR020816 Histone-like DNA-binding protein, conserved site CFM90_06345 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CFM90_06360 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CFM90_06360 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CFM90_06365 IPR024473 Transposase, IS4, N-terminal CFM90_06365 IPR002559 Transposase, IS4-like CFM90_06365 IPR012337 Ribonuclease H-like superfamily CFM90_06370 IPR019533 Peptidase S26 CFM90_06370 IPR019756 Peptidase S26A, signal peptidase I, serine active site CFM90_06370 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CFM90_06370 IPR019758 Peptidase S26A, signal peptidase I, conserved site CFM90_06370 IPR000223 Peptidase S26A, signal peptidase I CFM90_06370 IPR036286 LexA/Signal peptidase-like superfamily CFM90_06375 IPR036514 SGNH hydrolase superfamily CFM90_06375 IPR013830 SGNH hydrolase-type esterase domain CFM90_06380 IPR003439 ABC transporter-like CFM90_06380 IPR003593 AAA+ ATPase domain CFM90_06380 IPR017871 ABC transporter, conserved site CFM90_06380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06385 IPR018189 Phosphoglucose isomerase, conserved site CFM90_06385 IPR001672 Phosphoglucose isomerase (PGI) CFM90_06385 IPR035476 Phosphoglucose isomerase, SIS domain 1 CFM90_06385 IPR023096 Phosphoglucose isomerase, C-terminal CFM90_06385 IPR035482 Phosphoglucose isomerase, SIS domain 2 CFM90_06390 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CFM90_06390 IPR029056 Ribokinase-like CFM90_06390 IPR017953 Carbohydrate kinase, predicted, conserved site CFM90_06400 IPR010918 PurM-like, C-terminal domain CFM90_06400 IPR017926 Glutamine amidotransferase CFM90_06400 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CFM90_06400 IPR010073 Phosphoribosylformylglycinamidine synthase PurL CFM90_06400 IPR036676 PurM-like, C-terminal domain superfamily CFM90_06400 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily CFM90_06400 IPR036921 PurM-like, N-terminal domain superfamily CFM90_06400 IPR029062 Class I glutamine amidotransferase-like CFM90_06400 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal CFM90_06420 IPR013785 Aldolase-type TIM barrel CFM90_06420 IPR006638 Elp3/MiaB/NifB CFM90_06420 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CFM90_06420 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria CFM90_06420 IPR023885 4Fe4S-binding SPASM domain CFM90_06420 IPR017200 Coenzyme PQQ synthesis protein E CFM90_06420 IPR007197 Radical SAM CFM90_06440 IPR005119 LysR, substrate-binding CFM90_06440 IPR000847 Transcription regulator HTH, LysR CFM90_06440 IPR036390 Winged helix DNA-binding domain superfamily CFM90_06440 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_06445 IPR036291 NAD(P)-binding domain superfamily CFM90_06445 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase CFM90_06445 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_06445 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_06450 IPR011867 Molybdate ABC transporter, permease protein CFM90_06450 IPR006469 NifC-like ABC-type porter CFM90_06450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_06450 IPR035906 MetI-like superfamily CFM90_06455 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_06455 IPR035906 MetI-like superfamily CFM90_06465 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CFM90_06465 IPR003439 ABC transporter-like CFM90_06465 IPR017871 ABC transporter, conserved site CFM90_06465 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_06465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06465 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CFM90_06465 IPR013611 Transport-associated OB, type 2 CFM90_06465 IPR003593 AAA+ ATPase domain CFM90_06470 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_06470 IPR013727 Two-component sensor kinase, N-terminal CFM90_06470 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_06470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_06470 IPR005467 Histidine kinase domain CFM90_06470 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_06470 IPR003660 HAMP domain CFM90_06470 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_06475 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_06475 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_06475 IPR001789 Signal transduction response regulator, receiver domain CFM90_06475 IPR011006 CheY-like superfamily CFM90_06475 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_06475 IPR039420 Transcriptional regulatory protein WalR-like CFM90_06480 IPR033900 Porin domain, Gram-negative type CFM90_06480 IPR023614 Porin domain superfamily CFM90_06480 IPR001702 Porin, Gram-negative type CFM90_06480 IPR002299 Porin, Neisseria sp. type CFM90_06485 IPR003593 AAA+ ATPase domain CFM90_06485 IPR003439 ABC transporter-like CFM90_06485 IPR017871 ABC transporter, conserved site CFM90_06485 IPR012693 ABC transporter, phosphonate import, PhnC CFM90_06485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06510 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFM90_06510 IPR003439 ABC transporter-like CFM90_06510 IPR003593 AAA+ ATPase domain CFM90_06510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06510 IPR017871 ABC transporter, conserved site CFM90_06515 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CFM90_06515 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CFM90_06520 IPR036065 BolA-like superfamily CFM90_06520 IPR002634 BolA protein CFM90_06525 IPR006008 Intracellular septation protein A CFM90_06530 IPR011057 Mss4-like superfamily CFM90_06530 IPR002579 Peptide methionine sulphoxide reductase MrsB CFM90_06530 IPR028427 Peptide methionine sulfoxide reductase CFM90_06535 IPR003846 Protein adenylyltransferase SelO CFM90_06540 IPR042099 AMP-dependent synthetase-like superfamily CFM90_06540 IPR000873 AMP-dependent synthetase/ligase CFM90_06540 IPR020845 AMP-binding, conserved site CFM90_06540 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_06545 IPR028081 Leucine-binding protein domain CFM90_06545 IPR028082 Periplasmic binding protein-like I CFM90_06545 IPR000709 Leu/Ile/Val-binding protein CFM90_06550 IPR001851 ABC transporter, permease CFM90_06560 IPR017871 ABC transporter, conserved site CFM90_06560 IPR003439 ABC transporter-like CFM90_06560 IPR003593 AAA+ ATPase domain CFM90_06560 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFM90_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06565 IPR003439 ABC transporter-like CFM90_06565 IPR017871 ABC transporter, conserved site CFM90_06565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06565 IPR003593 AAA+ ATPase domain CFM90_06565 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CFM90_06575 IPR003961 Fibronectin type III CFM90_06575 IPR012334 Pectin lyase fold CFM90_06575 IPR013783 Immunoglobulin-like fold CFM90_06575 IPR000743 Glycoside hydrolase, family 28 CFM90_06575 IPR036116 Fibronectin type III superfamily CFM90_06575 IPR011050 Pectin lyase fold/virulence factor CFM90_06580 IPR004840 Amino acid permease, conserved site CFM90_06580 IPR004841 Amino acid permease/ SLC12A domain CFM90_06585 IPR004841 Amino acid permease/ SLC12A domain CFM90_06585 IPR004840 Amino acid permease, conserved site CFM90_06590 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_06590 IPR012799 Fatty oxidation complex, alpha subunit FadB CFM90_06590 IPR036291 NAD(P)-binding domain superfamily CFM90_06590 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CFM90_06590 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_06590 IPR029045 ClpP/crotonase-like domain superfamily CFM90_06590 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CFM90_06590 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CFM90_06590 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CFM90_06595 IPR036380 Isochorismatase-like superfamily CFM90_06595 IPR000868 Isochorismatase-like CFM90_06600 IPR020616 Thiolase, N-terminal CFM90_06600 IPR020613 Thiolase, conserved site CFM90_06600 IPR002155 Thiolase CFM90_06600 IPR020610 Thiolase, active site CFM90_06600 IPR020615 Thiolase, acyl-enzyme intermediate active site CFM90_06600 IPR016039 Thiolase-like CFM90_06600 IPR020617 Thiolase, C-terminal CFM90_06605 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CFM90_06605 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_06605 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_06605 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_06605 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_06605 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_06605 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_06610 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_06610 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_06610 IPR036291 NAD(P)-binding domain superfamily CFM90_06620 IPR001466 Beta-lactamase-related CFM90_06620 IPR012338 Beta-lactamase/transpeptidase-like CFM90_06625 IPR020843 Polyketide synthase, enoylreductase domain CFM90_06625 IPR036291 NAD(P)-binding domain superfamily CFM90_06625 IPR011032 GroES-like superfamily CFM90_06625 IPR041694 Oxidoreductase, N-terminal domain CFM90_06625 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_06630 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CFM90_06630 IPR001303 Class II aldolase/adducin N-terminal CFM90_06640 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_06640 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_06640 IPR036291 NAD(P)-binding domain superfamily CFM90_06645 IPR029058 Alpha/Beta hydrolase fold CFM90_06645 IPR000073 Alpha/beta hydrolase fold-1 CFM90_06645 IPR000639 Epoxide hydrolase-like CFM90_06650 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CFM90_06650 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CFM90_06650 IPR039697 Iron-type alcohol dehydrogenase-like CFM90_06655 IPR013094 Alpha/beta hydrolase fold-3 CFM90_06655 IPR029058 Alpha/Beta hydrolase fold CFM90_06680 IPR008490 Transposase InsH, N-terminal CFM90_06680 IPR002559 Transposase, IS4-like CFM90_06685 IPR013686 Polypeptide-transport-associated, ShlB-type CFM90_06685 IPR034746 POTRA domain CFM90_06685 IPR035251 ShlB, POTRA domain CFM90_06685 IPR027282 Two partner secretion pathway transporter CFM90_06685 IPR005565 Haemolysin activator HlyB, C-terminal CFM90_06700 IPR006222 Aminomethyltransferase, folate-binding domain CFM90_06700 IPR017703 YgfZ/GcvT conserved site CFM90_06700 IPR023758 tRNA-modifying protein YgfZ CFM90_06700 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CFM90_06705 IPR003770 Endolytic murein transglycosylase CFM90_06710 IPR018094 Thymidylate kinase CFM90_06710 IPR039430 Thymidylate kinase-like domain CFM90_06710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06715 IPR015199 DNA polymerase III, delta subunit, C-terminal CFM90_06715 IPR004622 DNA polymerase III, delta prime subunit CFM90_06715 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CFM90_06725 IPR032466 Metal-dependent hydrolase CFM90_06725 IPR001130 TatD family CFM90_06725 IPR018228 Deoxyribonuclease, TatD-related, conserved site CFM90_06725 IPR015991 Uncharacterised hydrolase TatD-type CFM90_06735 IPR042095 Sulfatase-modifying factor enzyme superfamily CFM90_06735 IPR024775 DinB-like domain CFM90_06735 IPR034660 DinB/YfiT-like putative metalloenzymes CFM90_06735 IPR005532 Sulfatase-modifying factor enzyme CFM90_06735 IPR032890 Hercynine oxygenase, Actinobacteria CFM90_06735 IPR017806 Ergothioneine biosynthesis protein EgtB CFM90_06735 IPR016187 C-type lectin fold CFM90_06740 IPR000843 LacI-type HTH domain CFM90_06740 IPR028082 Periplasmic binding protein-like I CFM90_06740 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_06745 IPR006061 Solute-binding family 1, conserved site CFM90_06745 IPR006059 Bacterial extracellular solute-binding protein CFM90_06745 IPR026045 Ferric binding protein CFM90_06755 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_06755 IPR005667 Sulphate ABC transporter permease protein 2 CFM90_06755 IPR035906 MetI-like superfamily CFM90_06755 IPR011866 Sulphate ABC transporter, permease protein CysW CFM90_06760 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CFM90_06760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06760 IPR013611 Transport-associated OB, type 2 CFM90_06760 IPR003593 AAA+ ATPase domain CFM90_06760 IPR017871 ABC transporter, conserved site CFM90_06760 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 CFM90_06760 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_06760 IPR003439 ABC transporter-like CFM90_06765 IPR042283 GpdQ, catalytic alpha/beta sandwich domain CFM90_06765 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CFM90_06765 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CFM90_06765 IPR042281 GpdQ, beta-strand dimerisation domain CFM90_06770 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CFM90_06770 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CFM90_06770 IPR036366 PGBD superfamily CFM90_06770 IPR036365 PGBD-like superfamily CFM90_06775 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha CFM90_06775 IPR001017 Dehydrogenase, E1 component CFM90_06775 IPR029061 Thiamin diphosphate-binding fold CFM90_06780 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CFM90_06780 IPR029061 Thiamin diphosphate-binding fold CFM90_06780 IPR033248 Transketolase, C-terminal domain CFM90_06780 IPR005475 Transketolase-like, pyrimidine-binding domain CFM90_06785 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CFM90_06785 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CFM90_06785 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CFM90_06785 IPR011053 Single hybrid motif CFM90_06785 IPR004167 Peripheral subunit-binding domain CFM90_06785 IPR036625 E3-binding domain superfamily CFM90_06785 IPR000089 Biotin/lipoyl attachment CFM90_06800 IPR029062 Class I glutamine amidotransferase-like CFM90_06800 IPR002818 DJ-1/PfpI CFM90_06810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_06810 IPR013216 Methyltransferase type 11 CFM90_06820 IPR010071 Amino acid adenylation domain CFM90_06820 IPR006162 Phosphopantetheine attachment site CFM90_06820 IPR009081 Phosphopantetheine binding ACP domain CFM90_06820 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CFM90_06820 IPR013217 Methyltransferase type 12 CFM90_06820 IPR036736 ACP-like superfamily CFM90_06820 IPR000873 AMP-dependent synthetase/ligase CFM90_06820 IPR001242 Condensation domain CFM90_06820 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CFM90_06820 IPR042099 AMP-dependent synthetase-like superfamily CFM90_06820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_06820 IPR020845 AMP-binding, conserved site CFM90_06825 IPR010105 TonB-dependent siderophore receptor CFM90_06825 IPR012910 TonB-dependent receptor, plug domain CFM90_06825 IPR000531 TonB-dependent receptor-like, beta-barrel CFM90_06825 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFM90_06825 IPR039426 Vitamin B12 transporter BtuB-like CFM90_06830 IPR017938 Riboflavin synthase-like beta-barrel CFM90_06830 IPR007037 Siderophore-interacting protein, C-terminal domain CFM90_06830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06830 IPR003439 ABC transporter-like CFM90_06830 IPR017927 FAD-binding domain, ferredoxin reductase-type CFM90_06830 IPR013113 FAD-binding 9, siderophore-interacting CFM90_06830 IPR017871 ABC transporter, conserved site CFM90_06830 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFM90_06830 IPR011527 ABC transporter type 1, transmembrane domain CFM90_06830 IPR003593 AAA+ ATPase domain CFM90_06830 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CFM90_06835 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFM90_06835 IPR003439 ABC transporter-like CFM90_06835 IPR017871 ABC transporter, conserved site CFM90_06835 IPR013113 FAD-binding 9, siderophore-interacting CFM90_06835 IPR017927 FAD-binding domain, ferredoxin reductase-type CFM90_06835 IPR011527 ABC transporter type 1, transmembrane domain CFM90_06835 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CFM90_06835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_06835 IPR017938 Riboflavin synthase-like beta-barrel CFM90_06835 IPR007037 Siderophore-interacting protein, C-terminal domain CFM90_06835 IPR003593 AAA+ ATPase domain CFM90_06840 IPR014043 Acyl transferase CFM90_06840 IPR001227 Acyl transferase domain superfamily CFM90_06840 IPR032821 Ketoacyl-synthetase, C-terminal extension CFM90_06840 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFM90_06840 IPR009081 Phosphopantetheine binding ACP domain CFM90_06840 IPR016039 Thiolase-like CFM90_06840 IPR014031 Beta-ketoacyl synthase, C-terminal CFM90_06840 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CFM90_06840 IPR018201 Beta-ketoacyl synthase, active site CFM90_06840 IPR036736 ACP-like superfamily CFM90_06840 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CFM90_06840 IPR001242 Condensation domain CFM90_06840 IPR014030 Beta-ketoacyl synthase, N-terminal CFM90_06840 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CFM90_06840 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CFM90_06845 IPR010071 Amino acid adenylation domain CFM90_06845 IPR036736 ACP-like superfamily CFM90_06845 IPR020845 AMP-binding, conserved site CFM90_06845 IPR000873 AMP-dependent synthetase/ligase CFM90_06845 IPR042099 AMP-dependent synthetase-like superfamily CFM90_06845 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CFM90_06845 IPR001242 Condensation domain CFM90_06845 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CFM90_06845 IPR009081 Phosphopantetheine binding ACP domain CFM90_06845 IPR013217 Methyltransferase type 12 CFM90_06845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_06845 IPR006162 Phosphopantetheine attachment site CFM90_06855 IPR003313 AraC-type arabinose-binding/dimerisation domain CFM90_06855 IPR037923 Transcription regulator HTH-like CFM90_06855 IPR018060 DNA binding HTH domain, AraC-type CFM90_06855 IPR014710 RmlC-like jelly roll fold CFM90_06855 IPR020449 Transcription regulator HTH, AraC- type CFM90_06855 IPR023609 Transcription regulator HTH, RhaS CFM90_06855 IPR009057 Homeobox-like domain superfamily CFM90_06860 IPR005042 TAL effector repeat CFM90_06865 IPR000182 GNAT domain CFM90_06865 IPR016181 Acyl-CoA N-acyltransferase CFM90_06875 IPR031043 Putative histamine N-monooxygenase CFM90_06875 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase CFM90_06875 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_06900 IPR026286 Maleate isomerase/Arylmalonate decarboxylase CFM90_06900 IPR028615 Maleate isomerase CFM90_06910 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CFM90_06910 IPR011234 Fumarylacetoacetase-like, C-terminal CFM90_06915 IPR014710 RmlC-like jelly roll fold CFM90_06915 IPR011051 RmlC-like cupin domain superfamily CFM90_06915 IPR013096 Cupin 2, conserved barrel CFM90_06920 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_06920 IPR002938 FAD-binding domain CFM90_06925 IPR029069 HotDog domain superfamily CFM90_06925 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CFM90_06940 IPR018060 DNA binding HTH domain, AraC-type CFM90_06940 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CFM90_06940 IPR018062 HTH domain AraC-type, conserved site CFM90_06940 IPR009057 Homeobox-like domain superfamily CFM90_06955 IPR007325 Kynurenine formamidase/cyclase-like CFM90_06955 IPR037175 Kynurenine formamidase superfamily CFM90_06960 IPR036390 Winged helix DNA-binding domain superfamily CFM90_06960 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_06960 IPR012349 FMN-binding split barrel CFM90_06960 IPR002563 Flavin reductase like domain CFM90_06965 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_06965 IPR041654 Styrene monooxygenase StyA, putative substrate binding domain CFM90_06970 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_06970 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_06970 IPR036291 NAD(P)-binding domain superfamily CFM90_06985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_06985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_06985 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_06985 IPR027619 Putative C-S lyase CFM90_06985 IPR004839 Aminotransferase, class I/classII CFM90_07010 IPR001584 Integrase, catalytic core CFM90_07010 IPR009057 Homeobox-like domain superfamily CFM90_07010 IPR036397 Ribonuclease H superfamily CFM90_07010 IPR012337 Ribonuclease H-like superfamily CFM90_07040 IPR011701 Major facilitator superfamily CFM90_07040 IPR004638 Drug resistance transporter EmrB-like CFM90_07040 IPR036259 MFS transporter superfamily CFM90_07040 IPR020846 Major facilitator superfamily domain CFM90_07045 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CFM90_07050 IPR003423 Outer membrane efflux protein CFM90_07050 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_07065 IPR004839 Aminotransferase, class I/classII CFM90_07065 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_07065 IPR036390 Winged helix DNA-binding domain superfamily CFM90_07065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_07065 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_07065 IPR000524 Transcription regulator HTH, GntR CFM90_07065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_07070 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CFM90_07070 IPR010514 COX aromatic rich motif CFM90_07070 IPR008972 Cupredoxin CFM90_07070 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain CFM90_07070 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CFM90_07070 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CFM90_07070 IPR006333 Cytochrome o ubiquinol oxidase subunit II CFM90_07075 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CFM90_07075 IPR023616 Cytochrome c oxidase-like, subunit I domain CFM90_07075 IPR014207 Cytochrome o ubiquinol oxidase, subunit I CFM90_07075 IPR000883 Cytochrome c oxidase subunit I CFM90_07075 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CFM90_07080 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CFM90_07080 IPR035973 Cytochrome c oxidase subunit III-like superfamily CFM90_07080 IPR000298 Cytochrome c oxidase subunit III-like CFM90_07080 IPR024791 Cytochrome c oxidase subunit III CFM90_07080 IPR014206 Cytochrome o ubiquinol oxidase, subunit III CFM90_07080 IPR033946 Ubiquinol oxidase subunit III domain CFM90_07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_07120 IPR004472 Dethiobiotin synthase BioD CFM90_07125 IPR004839 Aminotransferase, class I/classII CFM90_07125 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_07125 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria CFM90_07125 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CFM90_07125 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_07125 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_07130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_07130 IPR005814 Aminotransferase class-III CFM90_07130 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CFM90_07130 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_07130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_07155 IPR005119 LysR, substrate-binding CFM90_07155 IPR000847 Transcription regulator HTH, LysR CFM90_07155 IPR036390 Winged helix DNA-binding domain superfamily CFM90_07155 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_07160 IPR010292 Uncharacterised protein family CreA CFM90_07165 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_07165 IPR012675 Beta-grasp domain superfamily CFM90_07165 IPR002888 [2Fe-2S]-binding CFM90_07165 IPR036884 [2Fe-2S]-binding domain superfamily CFM90_07165 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_07170 IPR012780 Carbon-monoxide dehydrogenase, large subunit CFM90_07170 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CFM90_07170 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CFM90_07170 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CFM90_07170 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CFM90_07195 IPR003777 XdhC- CoxI CFM90_07195 IPR027051 XdhC Rossmann domain CFM90_07205 IPR003416 MgtC/SapB/SrpB/YhiD family CFM90_07210 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_07210 IPR004090 Chemotaxis methyl-accepting receptor CFM90_07210 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_07210 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_07210 IPR003660 HAMP domain CFM90_07210 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_07220 IPR008928 Six-hairpin glycosidase superfamily CFM90_07220 IPR012341 Six-hairpin glycosidase-like superfamily CFM90_07220 IPR011613 GH15-like domain CFM90_07230 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_07230 IPR015590 Aldehyde dehydrogenase domain CFM90_07230 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFM90_07230 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_07230 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_07245 IPR003593 AAA+ ATPase domain CFM90_07245 IPR032781 ABC-transporter extension domain CFM90_07245 IPR003439 ABC transporter-like CFM90_07245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_07250 IPR003507 Peptidase family S66 CFM90_07250 IPR040921 LD-carboxypeptidase, C-terminal CFM90_07250 IPR040449 LD-carboxypeptidase, N-terminal CFM90_07250 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal CFM90_07250 IPR029062 Class I glutamine amidotransferase-like CFM90_07250 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CFM90_07255 IPR016193 Cytidine deaminase-like CFM90_07255 IPR016192 APOBEC/CMP deaminase, zinc-binding CFM90_07255 IPR002125 Cytidine and deoxycytidylate deaminase domain CFM90_07255 IPR028883 tRNA-specific adenosine deaminase CFM90_07260 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family CFM90_07260 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily CFM90_07265 IPR024924 7-carboxy-7-deazaguanine synthase-like CFM90_07265 IPR007197 Radical SAM CFM90_07265 IPR013785 Aldolase-type TIM barrel CFM90_07265 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type CFM90_07275 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_07275 IPR040442 Pyruvate kinase-like domain superfamily CFM90_07275 IPR039556 ICL/PEPM domain CFM90_07285 IPR017508 HipA, N-terminal subdomain 1 CFM90_07285 IPR012893 HipA-like, C-terminal CFM90_07305 IPR015889 Intradiol ring-cleavage dioxygenase, core CFM90_07305 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CFM90_07305 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit CFM90_07310 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CFM90_07310 IPR015889 Intradiol ring-cleavage dioxygenase, core CFM90_07310 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal CFM90_07310 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit CFM90_07315 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_07315 IPR036390 Winged helix DNA-binding domain superfamily CFM90_07315 IPR005119 LysR, substrate-binding CFM90_07315 IPR000847 Transcription regulator HTH, LysR CFM90_07365 IPR025777 GMP synthetase ATP pyrophosphatase domain CFM90_07365 IPR004739 GMP synthase, glutamine amidotransferase CFM90_07365 IPR022310 NAD/GMP synthase CFM90_07365 IPR022955 GMP synthase CFM90_07365 IPR001674 GMP synthase, C-terminal CFM90_07365 IPR017926 Glutamine amidotransferase CFM90_07365 IPR029062 Class I glutamine amidotransferase-like CFM90_07365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_07375 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CFM90_07375 IPR001093 IMP dehydrogenase/GMP reductase CFM90_07375 IPR000644 CBS domain CFM90_07375 IPR013785 Aldolase-type TIM barrel CFM90_07375 IPR005990 Inosine-5'-monophosphate dehydrogenase CFM90_07380 IPR000620 EamA domain CFM90_07390 IPR037021 RnfH superfamily CFM90_07390 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CFM90_07390 IPR005346 RnfH protein CFM90_07395 IPR005031 Coenzyme Q-binding protein COQ10, START domain CFM90_07395 IPR023393 START-like domain superfamily CFM90_07400 IPR023620 Small protein B CFM90_07400 IPR000037 SsrA-binding protein CFM90_07400 IPR020081 SsrA-binding protein, conserved site CFM90_07405 IPR001107 Band 7 domain CFM90_07405 IPR036013 Band 7/SPFH domain superfamily CFM90_07405 IPR001972 Stomatin family CFM90_07405 IPR032435 Band 7, C-terminal extension CFM90_07405 IPR018080 Band 7/stomatin-like, conserved site CFM90_07415 IPR008279 PEP-utilising enzyme, mobile domain CFM90_07415 IPR013815 ATP-grasp fold, subdomain 1 CFM90_07415 IPR040442 Pyruvate kinase-like domain superfamily CFM90_07415 IPR023151 PEP-utilising enzyme, conserved site CFM90_07415 IPR036637 Phosphohistidine domain superfamily CFM90_07415 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CFM90_07415 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_07415 IPR006319 Phosphoenolpyruvate synthase CFM90_07415 IPR000121 PEP-utilising enzyme, C-terminal CFM90_07415 IPR018274 PEP-utilising enzyme, active site CFM90_07420 IPR026530 Phosphoenolpyruvate synthase regulatory protein CFM90_07420 IPR005177 Bifunctional kinase-pyrophosphorylase CFM90_07425 IPR029028 Alpha/beta knot methyltransferases CFM90_07425 IPR029064 50S ribosomal protein L30e-like CFM90_07425 IPR001537 tRNA/rRNA methyltransferase, SpoU type CFM90_07425 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CFM90_07425 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFM90_07430 IPR024567 Ribonuclease HII/HIII domain CFM90_07430 IPR012337 Ribonuclease H-like superfamily CFM90_07430 IPR036397 Ribonuclease H superfamily CFM90_07430 IPR001352 Ribonuclease HII/HIII CFM90_07430 IPR022898 Ribonuclease HII CFM90_07435 IPR003835 Glycosyl transferase, family 19 CFM90_07440 IPR011004 Trimeric LpxA-like superfamily CFM90_07440 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CFM90_07440 IPR018357 Hexapeptide transferase, conserved site CFM90_07440 IPR001451 Hexapeptide repeat CFM90_07440 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily CFM90_07440 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal CFM90_07445 IPR029069 HotDog domain superfamily CFM90_07445 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CFM90_07445 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CFM90_07450 IPR001451 Hexapeptide repeat CFM90_07450 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CFM90_07450 IPR011004 Trimeric LpxA-like superfamily CFM90_07450 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD CFM90_07450 IPR018357 Hexapeptide transferase, conserved site CFM90_07455 IPR005632 Chaperone protein Skp CFM90_07455 IPR024930 Skp domain superfamily CFM90_07460 IPR039910 Surface antigen D15-like CFM90_07460 IPR010827 POTRA domain, BamA/TamA-like CFM90_07460 IPR000184 Bacterial surface antigen (D15) CFM90_07460 IPR023707 Outer membrane protein assembly factor BamA CFM90_07460 IPR034746 POTRA domain CFM90_07465 IPR041489 PDZ domain 6 CFM90_07465 IPR036034 PDZ superfamily CFM90_07465 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CFM90_07465 IPR008915 Peptidase M50 CFM90_07465 IPR001478 PDZ domain CFM90_07470 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CFM90_07470 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CFM90_07470 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CFM90_07470 IPR026877 DXP reductoisomerase C-terminal domain CFM90_07470 IPR036291 NAD(P)-binding domain superfamily CFM90_07470 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CFM90_07475 IPR000374 Phosphatidate cytidylyltransferase CFM90_07480 IPR036424 Decaprenyl diphosphate synthase-like superfamily CFM90_07480 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CFM90_07480 IPR001441 Decaprenyl diphosphate synthase-like CFM90_07485 IPR036191 RRF superfamily CFM90_07485 IPR023584 Ribosome recycling factor domain CFM90_07485 IPR002661 Ribosome recycling factor CFM90_07490 IPR011817 Uridylate kinase CFM90_07490 IPR015963 Uridylate kinase, bacteria CFM90_07490 IPR001048 Aspartate/glutamate/uridylate kinase CFM90_07490 IPR036393 Acetylglutamate kinase-like superfamily CFM90_07495 IPR009060 UBA-like superfamily CFM90_07495 IPR018101 Translation elongation factor Ts, conserved site CFM90_07495 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CFM90_07495 IPR001816 Translation elongation factor EFTs/EF1B CFM90_07495 IPR036402 Elongation factor Ts, dimerisation domain superfamily CFM90_07500 IPR018130 Ribosomal protein S2, conserved site CFM90_07500 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CFM90_07500 IPR001865 Ribosomal protein S2 CFM90_07500 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CFM90_07505 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CFM90_07505 IPR001714 Peptidase M24, methionine aminopeptidase CFM90_07505 IPR000994 Peptidase M24 CFM90_07505 IPR036005 Creatinase/aminopeptidase-like CFM90_07510 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CFM90_07510 IPR006674 HD domain CFM90_07510 IPR003607 HD/PDEase domain CFM90_07510 IPR002912 ACT domain CFM90_07510 IPR002934 Polymerase, nucleotidyl transferase domain CFM90_07510 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme CFM90_07515 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CFM90_07515 IPR006145 Pseudouridine synthase, RsuA/RluA CFM90_07515 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CFM90_07515 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CFM90_07515 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFM90_07515 IPR036986 RNA-binding S4 domain superfamily CFM90_07515 IPR002942 RNA-binding S4 domain CFM90_07525 IPR023635 Peptide deformylase CFM90_07525 IPR036821 Peptide deformylase superfamily CFM90_07530 IPR033136 NAD-dependent DNA ligase, conserved site CFM90_07530 IPR036420 BRCT domain superfamily CFM90_07530 IPR001679 NAD-dependent DNA ligase CFM90_07530 IPR001357 BRCT domain CFM90_07530 IPR013839 NAD-dependent DNA ligase, adenylation CFM90_07530 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CFM90_07530 IPR018239 NAD-dependent DNA ligase, active site CFM90_07530 IPR010994 RuvA domain 2-like CFM90_07530 IPR004150 NAD-dependent DNA ligase, OB-fold CFM90_07530 IPR041663 DisA/LigA, helix-hairpin-helix motif CFM90_07530 IPR013840 NAD-dependent DNA ligase, N-terminal CFM90_07530 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CFM90_07530 IPR012340 Nucleic acid-binding, OB-fold CFM90_07540 IPR024704 Structural maintenance of chromosomes protein CFM90_07540 IPR010935 SMCs flexible hinge CFM90_07540 IPR003395 RecF/RecN/SMC, N-terminal CFM90_07540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_07540 IPR036277 SMCs flexible hinge superfamily CFM90_07540 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CFM90_07545 IPR000073 Alpha/beta hydrolase fold-1 CFM90_07545 IPR000639 Epoxide hydrolase-like CFM90_07545 IPR023489 Haloalkane dehalogenase, subfamily 1 CFM90_07545 IPR029058 Alpha/Beta hydrolase fold CFM90_07555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_07555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_07555 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ CFM90_07555 IPR004839 Aminotransferase, class I/classII CFM90_07555 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_07560 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CFM90_07560 IPR018357 Hexapeptide transferase, conserved site CFM90_07560 IPR001451 Hexapeptide repeat CFM90_07560 IPR011004 Trimeric LpxA-like superfamily CFM90_07560 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CFM90_07560 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily CFM90_07570 IPR006504 Transcriptional regulator Spx/MgsR CFM90_07570 IPR006660 Arsenate reductase-like CFM90_07570 IPR036249 Thioredoxin-like superfamily CFM90_07575 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_07575 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CFM90_07575 IPR002933 Peptidase M20 CFM90_07575 IPR011650 Peptidase M20, dimerisation domain CFM90_07585 IPR004556 Methyltransferase HemK-like CFM90_07585 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFM90_07585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_07585 IPR007848 Methyltransferase small domain CFM90_07585 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CFM90_07590 IPR020602 GTP cyclohydrolase I domain CFM90_07590 IPR018234 GTP cyclohydrolase I, conserved site CFM90_07590 IPR001474 GTP cyclohydrolase I CFM90_07615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_07615 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CFM90_07615 IPR035906 MetI-like superfamily CFM90_07620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_07620 IPR035906 MetI-like superfamily CFM90_07625 IPR030678 Peptide/nickel binding protein, MppA-type CFM90_07625 IPR039424 Solute-binding protein family 5 CFM90_07625 IPR000914 Solute-binding protein family 5 domain CFM90_07630 IPR003439 ABC transporter-like CFM90_07630 IPR017871 ABC transporter, conserved site CFM90_07630 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CFM90_07630 IPR003593 AAA+ ATPase domain CFM90_07630 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_07635 IPR000246 Peptidase T2, asparaginase 2 CFM90_07635 IPR029055 Nucleophile aminohydrolases, N-terminal CFM90_07645 IPR003593 AAA+ ATPase domain CFM90_07645 IPR032781 ABC-transporter extension domain CFM90_07645 IPR003439 ABC transporter-like CFM90_07645 IPR017871 ABC transporter, conserved site CFM90_07645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_07650 IPR023606 CoA-transferase family III domain superfamily CFM90_07650 IPR003673 CoA-transferase family III CFM90_07655 IPR007553 Domain of unknown function DUF523 CFM90_07660 IPR022920 Disulphide bond formation protein DsbB CFM90_07660 IPR023380 DsbB-like superfamily CFM90_07660 IPR003752 Disulphide bond formation protein DsbB/BdbC CFM90_07665 IPR003593 AAA+ ATPase domain CFM90_07665 IPR004504 DNA repair protein RadA CFM90_07665 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_07665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_07665 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_07665 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CFM90_07665 IPR041166 LapB, rubredoxin metal binding domain CFM90_07670 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CFM90_07670 IPR000821 Alanine racemase CFM90_07670 IPR001608 Alanine racemase, N-terminal CFM90_07670 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CFM90_07670 IPR029066 PLP-binding barrel CFM90_07670 IPR011079 Alanine racemase, C-terminal CFM90_07675 IPR036259 MFS transporter superfamily CFM90_07675 IPR011701 Major facilitator superfamily CFM90_07675 IPR023727 Lysophospholipid transporter LplT CFM90_07680 IPR005273 Uracil-DNA glycosylase family 4 CFM90_07680 IPR036895 Uracil-DNA glycosylase-like domain superfamily CFM90_07680 IPR005122 Uracil-DNA glycosylase-like CFM90_07685 IPR006464 N-acetyltransferase RimI/Ard1 CFM90_07685 IPR000182 GNAT domain CFM90_07685 IPR016181 Acyl-CoA N-acyltransferase CFM90_07690 IPR000905 Gcp-like domain CFM90_07690 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB CFM90_07710 IPR038965 Transposase InsF-like CFM90_07710 IPR009057 Homeobox-like domain superfamily CFM90_07760 IPR020891 Uncharacterised protein family UPF0758, conserved site CFM90_07760 IPR001405 Uncharacterised protein family UPF0758 CFM90_07760 IPR037518 MPN domain CFM90_07760 IPR025657 RadC-like JAB domain CFM90_07770 IPR026325 Protein of unknown function DUF932 CFM90_07775 IPR003115 ParB/Sulfiredoxin CFM90_07775 IPR004437 ParB/RepB/Spo0J partition protein CFM90_07775 IPR036086 ParB/Sulfiredoxin superfamily CFM90_07795 IPR007948 Protein of unknown function DUF736 CFM90_07800 IPR001387 Cro/C1-type helix-turn-helix domain CFM90_07800 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_07830 IPR025669 AAA domain CFM90_07830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_07845 IPR036286 LexA/Signal peptidase-like superfamily CFM90_07845 IPR019533 Peptidase S26 CFM90_07845 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF CFM90_07860 IPR005119 LysR, substrate-binding CFM90_07860 IPR000847 Transcription regulator HTH, LysR CFM90_07860 IPR036390 Winged helix DNA-binding domain superfamily CFM90_07860 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_07865 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_07865 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CFM90_07865 IPR036291 NAD(P)-binding domain superfamily CFM90_07865 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_07870 IPR040079 Glutathione Transferase family CFM90_07870 IPR036249 Thioredoxin-like superfamily CFM90_07870 IPR004045 Glutathione S-transferase, N-terminal CFM90_07870 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_07870 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_07870 IPR004046 Glutathione S-transferase, C-terminal CFM90_07875 IPR000847 Transcription regulator HTH, LysR CFM90_07875 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_07875 IPR005119 LysR, substrate-binding CFM90_07875 IPR036390 Winged helix DNA-binding domain superfamily CFM90_07885 IPR003688 Type IV secretion system protein TraG/VirD4 CFM90_07885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_07895 IPR014149 Conjugative transfer, TrbB CFM90_07895 IPR001482 Type II/IV secretion system protein CFM90_07895 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_07900 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CFM90_07910 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CFM90_07910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_07910 IPR003593 AAA+ ATPase domain CFM90_07910 IPR004346 CagE, TrbE, VirB component of type IV transporter system CFM90_07930 IPR014142 P-type conjugative transfer protein TrbG CFM90_07930 IPR033645 VirB9/CagX/TrbG, C-terminal CFM90_07930 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily CFM90_07930 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CFM90_07935 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CFM90_07935 IPR042217 Type IV secretion system, VirB10/TrbI CFM90_07945 IPR004638 Drug resistance transporter EmrB-like CFM90_07945 IPR020846 Major facilitator superfamily domain CFM90_07945 IPR011701 Major facilitator superfamily CFM90_07945 IPR036259 MFS transporter superfamily CFM90_07955 IPR011076 Malate synthase-like superfamily CFM90_07955 IPR019830 Malate synthase, conserved site CFM90_07955 IPR006252 Malate synthase A CFM90_07955 IPR001465 Malate synthase CFM90_07960 IPR006328 L-2-Haloacid dehalogenase CFM90_07960 IPR036412 HAD-like superfamily CFM90_07960 IPR006439 HAD hydrolase, subfamily IA CFM90_07960 IPR023214 HAD superfamily CFM90_07960 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CFM90_07970 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_07970 IPR036390 Winged helix DNA-binding domain superfamily CFM90_07970 IPR005119 LysR, substrate-binding CFM90_07970 IPR000847 Transcription regulator HTH, LysR CFM90_07980 IPR040442 Pyruvate kinase-like domain superfamily CFM90_07980 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_07980 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CFM90_07980 IPR006254 Isocitrate lyase CFM90_07980 IPR039556 ICL/PEPM domain CFM90_08000 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CFM90_08000 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CFM90_08000 IPR010203 Regulator of ribonuclease activity A CFM90_08005 IPR039368 Acetolactate synthase large subunit, TPP binding domain CFM90_08005 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CFM90_08005 IPR012000 Thiamine pyrophosphate enzyme, central domain CFM90_08005 IPR000399 TPP-binding enzyme, conserved site CFM90_08005 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CFM90_08005 IPR029061 Thiamin diphosphate-binding fold CFM90_08005 IPR029035 DHS-like NAD/FAD-binding domain superfamily CFM90_08005 IPR012846 Acetolactate synthase, large subunit, biosynthetic CFM90_08010 IPR001789 Signal transduction response regulator, receiver domain CFM90_08010 IPR011006 CheY-like superfamily CFM90_08010 IPR007492 LytTR DNA-binding domain CFM90_08015 IPR003018 GAF domain CFM90_08015 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_08015 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CFM90_08015 IPR010559 Signal transduction histidine kinase, internal region CFM90_08030 IPR000847 Transcription regulator HTH, LysR CFM90_08030 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_08030 IPR036390 Winged helix DNA-binding domain superfamily CFM90_08030 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain CFM90_08030 IPR005119 LysR, substrate-binding CFM90_08035 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CFM90_08035 IPR024765 TOBE-like domain CFM90_08035 IPR005666 Sulphate transport system permease protein 1 CFM90_08035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08035 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_08035 IPR017871 ABC transporter, conserved site CFM90_08035 IPR041193 CysA, C-terminal regulatory domain CFM90_08035 IPR003439 ABC transporter-like CFM90_08035 IPR003593 AAA+ ATPase domain CFM90_08040 IPR011866 Sulphate ABC transporter, permease protein CysW CFM90_08040 IPR035906 MetI-like superfamily CFM90_08040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_08040 IPR005667 Sulphate ABC transporter permease protein 2 CFM90_08045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_08045 IPR005667 Sulphate ABC transporter permease protein 2 CFM90_08045 IPR035906 MetI-like superfamily CFM90_08045 IPR011865 Sulphate ABC transporter, permease protein CysT CFM90_08060 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_08060 IPR005116 Transport-associated OB, type 1 CFM90_08060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08060 IPR017871 ABC transporter, conserved site CFM90_08060 IPR011868 Molybdate ABC transporter, ATP-binding protein CFM90_08060 IPR003439 ABC transporter-like CFM90_08060 IPR004606 Molybdenum-pterin binding CFM90_08060 IPR003593 AAA+ ATPase domain CFM90_08060 IPR015852 ABC transporter, molybdenum import, ModC CFM90_08065 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08065 IPR017871 ABC transporter, conserved site CFM90_08065 IPR003439 ABC transporter-like CFM90_08065 IPR003593 AAA+ ATPase domain CFM90_08065 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB CFM90_08070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_08070 IPR035906 MetI-like superfamily CFM90_08075 IPR011251 Luciferase-like domain CFM90_08075 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent CFM90_08075 IPR036661 Luciferase-like domain superfamily CFM90_08080 IPR015168 SsuA/THI5-like CFM90_08080 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_08080 IPR010067 Aliphatic sulfonates-binding protein CFM90_08085 IPR029039 Flavoprotein-like superfamily CFM90_08085 IPR020048 NADPH-dependent FMN reductase, SsuE CFM90_08085 IPR005025 NADPH-dependent FMN reductase-like CFM90_08090 IPR005669 Thiosulphate/Sulfate-binding protein CFM90_08090 IPR000957 Sulphate/thiosulphate-binding, conserved site CFM90_08090 IPR034408 Sulphate/thiosulphate-binding site CFM90_08095 IPR006037 Regulator of K+ conductance, C-terminal CFM90_08095 IPR022457 Aspartate-alanine antiporter CFM90_08095 IPR006512 YidE/YbjL duplication CFM90_08095 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CFM90_08100 IPR023667 NAD-dependent malic enzyme, proteobacteria CFM90_08100 IPR036291 NAD(P)-binding domain superfamily CFM90_08100 IPR001891 Malic oxidoreductase CFM90_08100 IPR037062 Malic enzyme, N-terminal domain superfamily CFM90_08100 IPR012302 Malic enzyme, NAD-binding CFM90_08100 IPR015884 Malic enzyme, conserved site CFM90_08100 IPR012301 Malic enzyme, N-terminal domain CFM90_08105 IPR013785 Aldolase-type TIM barrel CFM90_08105 IPR037396 FMN hydroxy acid dehydrogenase domain CFM90_08105 IPR000262 FMN-dependent dehydrogenase CFM90_08105 IPR020920 L-lactate dehydrogenase, bacterial CFM90_08105 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CFM90_08105 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CFM90_08110 IPR025944 Sigma-54 interaction domain, conserved site CFM90_08110 IPR002197 DNA binding HTH domain, Fis-type CFM90_08110 IPR009057 Homeobox-like domain superfamily CFM90_08110 IPR001789 Signal transduction response regulator, receiver domain CFM90_08110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08110 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_08110 IPR003593 AAA+ ATPase domain CFM90_08110 IPR011006 CheY-like superfamily CFM90_08110 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_08110 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_08115 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_08115 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_08115 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_08115 IPR005467 Histidine kinase domain CFM90_08115 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_08115 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_08115 IPR029151 Periplasmic sensor-like domain superfamily CFM90_08115 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CFM90_08125 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CFM90_08125 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CFM90_08125 IPR005288 L-aspartate oxidase CFM90_08125 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CFM90_08125 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_08125 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CFM90_08130 IPR011537 NADH ubiquinone oxidoreductase, F subunit CFM90_08130 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CFM90_08130 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CFM90_08130 IPR019554 Soluble ligand binding domain CFM90_08130 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CFM90_08130 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CFM90_08130 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CFM90_08135 IPR036628 Clp, N-terminal domain superfamily CFM90_08135 IPR019489 Clp ATPase, C-terminal CFM90_08135 IPR017730 Chaperonin ClpB CFM90_08135 IPR004176 Clp, N-terminal CFM90_08135 IPR018368 ClpA/B, conserved site 1 CFM90_08135 IPR001270 ClpA/B family CFM90_08135 IPR003959 ATPase, AAA-type, core CFM90_08135 IPR028299 ClpA/B, conserved site 2 CFM90_08135 IPR041546 ClpA/ClpB, AAA lid domain CFM90_08135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08135 IPR003593 AAA+ ATPase domain CFM90_08140 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative CFM90_08145 IPR003691 Putative fluoride ion transporter CrcB CFM90_08150 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CFM90_08150 IPR003448 Molybdopterin biosynthesis MoaE CFM90_08155 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CFM90_08155 IPR003749 Sulfur carrier ThiS/MoaD-like CFM90_08155 IPR012675 Beta-grasp domain superfamily CFM90_08160 IPR005111 MoeA, C-terminal, domain IV CFM90_08160 IPR008284 Molybdenum cofactor biosynthesis, conserved site CFM90_08160 IPR038987 Molybdopterin biosynthesis protein MoeA-like CFM90_08160 IPR036688 MoeA, C-terminal, domain IV superfamily CFM90_08160 IPR005110 MoeA, N-terminal and linker domain CFM90_08160 IPR001453 MoaB/Mog domain CFM90_08160 IPR036425 MoaB/Mog-like domain superfamily CFM90_08160 IPR036135 MoeA, N-terminal and linker domain superfamily CFM90_08165 IPR036895 Uracil-DNA glycosylase-like domain superfamily CFM90_08165 IPR005122 Uracil-DNA glycosylase-like CFM90_08170 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_08170 IPR029144 Threonine synthase, N-terminal CFM90_08170 IPR004450 Threonine synthase-like CFM90_08170 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_08170 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CFM90_08170 IPR037158 Threonine synthase, N-terminal domain superfamily CFM90_08175 IPR001342 Homoserine dehydrogenase, catalytic CFM90_08175 IPR036291 NAD(P)-binding domain superfamily CFM90_08175 IPR019811 Homoserine dehydrogenase, conserved site CFM90_08175 IPR016204 Homoserine dehydrogenase CFM90_08175 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CFM90_08175 IPR002912 ACT domain CFM90_08180 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_08180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_08180 IPR004839 Aminotransferase, class I/classII CFM90_08180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_08190 IPR003342 Glycosyl transferase family 39/83 CFM90_08190 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase CFM90_08195 IPR000390 Small multidrug resistance protein family CFM90_08195 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF CFM90_08200 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB CFM90_08200 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_08200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_08200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_08200 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFM90_08205 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_08205 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase CFM90_08205 IPR001173 Glycosyltransferase 2-like CFM90_08210 IPR005793 Formyl transferase, C-terminal CFM90_08210 IPR036477 Formyl transferase, N-terminal domain superfamily CFM90_08210 IPR011034 Formyl transferase-like, C-terminal domain superfamily CFM90_08210 IPR036291 NAD(P)-binding domain superfamily CFM90_08210 IPR002376 Formyl transferase, N-terminal CFM90_08210 IPR001509 NAD-dependent epimerase/dehydratase CFM90_08210 IPR021168 Bifunctional polymyxin resistance protein, ArnA CFM90_08215 IPR021168 Bifunctional polymyxin resistance protein, ArnA CFM90_08215 IPR001509 NAD-dependent epimerase/dehydratase CFM90_08215 IPR005793 Formyl transferase, C-terminal CFM90_08215 IPR002376 Formyl transferase, N-terminal CFM90_08215 IPR036477 Formyl transferase, N-terminal domain superfamily CFM90_08215 IPR011034 Formyl transferase-like, C-terminal domain superfamily CFM90_08215 IPR036291 NAD(P)-binding domain superfamily CFM90_08220 IPR002509 NodB homology domain CFM90_08220 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable CFM90_08220 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CFM90_08225 IPR036249 Thioredoxin-like superfamily CFM90_08225 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CFM90_08225 IPR013766 Thioredoxin domain CFM90_08225 IPR024706 Peroxiredoxin, AhpC-type CFM90_08230 IPR003714 PhoH-like protein CFM90_08230 IPR029060 PIN-like domain superfamily CFM90_08230 IPR002716 PIN domain CFM90_08230 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08240 IPR038765 Papain-like cysteine peptidase superfamily CFM90_08240 IPR000064 Endopeptidase, NLPC/P60 domain CFM90_08245 IPR001204 Phosphate transporter CFM90_08255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08255 IPR007692 DNA helicase, DnaB type CFM90_08255 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CFM90_08255 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CFM90_08255 IPR003593 AAA+ ATPase domain CFM90_08255 IPR007694 DNA helicase, DnaB-like, C-terminal CFM90_08255 IPR007693 DNA helicase, DnaB-like, N-terminal CFM90_08260 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CFM90_08260 IPR020594 Ribosomal protein L9, bacteria/chloroplast CFM90_08260 IPR000244 Ribosomal protein L9 CFM90_08260 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CFM90_08260 IPR020069 Ribosomal protein L9, C-terminal CFM90_08260 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CFM90_08260 IPR020070 Ribosomal protein L9, N-terminal CFM90_08265 IPR036870 Ribosomal protein S18 superfamily CFM90_08265 IPR018275 Ribosomal protein S18, conserved site CFM90_08265 IPR001648 Ribosomal protein S18 CFM90_08270 IPR000424 Primosome PriB/single-strand DNA-binding CFM90_08270 IPR012340 Nucleic acid-binding, OB-fold CFM90_08270 IPR023646 Primosomal replication protein PriB CFM90_08275 IPR000529 Ribosomal protein S6 CFM90_08275 IPR020814 Ribosomal protein S6, plastid/chloroplast CFM90_08275 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CFM90_08275 IPR035980 Ribosomal protein S6 superfamily CFM90_08280 IPR006034 Asparaginase/glutaminase-like CFM90_08280 IPR020827 Asparaginase/glutaminase, active site 1 CFM90_08280 IPR027475 Asparaginase/glutaminase, active site 2 CFM90_08280 IPR037152 L-asparaginase, N-terminal domain superfamily CFM90_08280 IPR027474 L-asparaginase, N-terminal CFM90_08280 IPR040919 Asparaginase/glutaminase, C-terminal CFM90_08280 IPR036152 Asparaginase/glutaminase-like superfamily CFM90_08280 IPR004550 L-asparaginase, type II CFM90_08280 IPR027473 L-asparaginase, C-terminal CFM90_08285 IPR001433 Oxidoreductase FAD/NAD(P)-binding CFM90_08285 IPR017938 Riboflavin synthase-like beta-barrel CFM90_08285 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CFM90_08285 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CFM90_08285 IPR017927 FAD-binding domain, ferredoxin reductase-type CFM90_08285 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CFM90_08285 IPR033892 Ferredoxin--NADP reductase, bacteria CFM90_08290 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_08290 IPR036286 LexA/Signal peptidase-like superfamily CFM90_08290 IPR006199 LexA repressor, DNA-binding domain CFM90_08290 IPR015927 Peptidase S24/S26A/S26B/S26C CFM90_08290 IPR036390 Winged helix DNA-binding domain superfamily CFM90_08290 IPR006200 Transcription regulator LexA CFM90_08290 IPR039418 LexA-like CFM90_08290 IPR006197 Peptidase S24, LexA-like CFM90_08305 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_08305 IPR002933 Peptidase M20 CFM90_08305 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CFM90_08305 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CFM90_08305 IPR011650 Peptidase M20, dimerisation domain CFM90_08320 IPR013785 Aldolase-type TIM barrel CFM90_08320 IPR004653 tRNA-dihydrouridine(20/20a) synthase CFM90_08320 IPR001269 tRNA-dihydrouridine synthase CFM90_08320 IPR018517 tRNA-dihydrouridine synthase, conserved site CFM90_08320 IPR035587 DUS-like, FMN-binding domain CFM90_08325 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CFM90_08325 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_08325 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_08325 IPR029045 ClpP/crotonase-like domain superfamily CFM90_08340 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_08340 IPR036390 Winged helix DNA-binding domain superfamily CFM90_08340 IPR000835 MarR-type HTH domain CFM90_08340 IPR012712 HTH-type transcriptional regulator HpaR/FarR CFM90_08340 IPR023187 Transcriptional regulator MarR-type, conserved site CFM90_08345 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_08345 IPR003423 Outer membrane efflux protein CFM90_08350 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFM90_08350 IPR005694 Efflux pump membrane protein CFM90_08355 IPR036259 MFS transporter superfamily CFM90_08355 IPR020846 Major facilitator superfamily domain CFM90_08355 IPR011701 Major facilitator superfamily CFM90_08355 IPR004638 Drug resistance transporter EmrB-like CFM90_08360 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFM90_08360 IPR015947 PUA-like superfamily CFM90_08360 IPR014780 tRNA pseudouridine synthase II, TruB CFM90_08360 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CFM90_08360 IPR032819 tRNA pseudouridylate synthase B, C-terminal CFM90_08360 IPR002501 Pseudouridine synthase II, N-terminal CFM90_08365 IPR023799 Ribosome-binding factor A domain superfamily CFM90_08365 IPR000238 Ribosome-binding factor A CFM90_08365 IPR015946 K homology domain-like, alpha/beta CFM90_08370 IPR023115 Translation initiation factor IF- 2, domain 3 CFM90_08370 IPR013575 Initiation factor 2 associated domain, bacterial CFM90_08370 IPR006847 Translation initiation factor IF-2, N-terminal CFM90_08370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08370 IPR005225 Small GTP-binding protein domain CFM90_08370 IPR000795 Transcription factor, GTP-binding domain CFM90_08370 IPR000178 Translation initiation factor aIF-2, bacterial-like CFM90_08370 IPR015760 Translation initiation factor IF- 2 CFM90_08370 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_08370 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CFM90_08370 IPR009061 Putative DNA-binding domain superfamily CFM90_08375 IPR015946 K homology domain-like, alpha/beta CFM90_08375 IPR012340 Nucleic acid-binding, OB-fold CFM90_08375 IPR009019 K homology domain superfamily, prokaryotic type CFM90_08375 IPR025249 KH domain, NusA-like CFM90_08375 IPR022967 RNA-binding domain, S1 CFM90_08375 IPR003029 S1 domain CFM90_08375 IPR013735 Transcription factor NusA, N-terminal CFM90_08375 IPR004087 K Homology domain CFM90_08375 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CFM90_08375 IPR010214 Transcription termination factor NusA, C-terminal duplication CFM90_08375 IPR010213 Transcription termination factor NusA CFM90_08375 IPR030842 Transcription termination/antitermination protein NusA, bacterial CFM90_08375 IPR036555 NusA, N-terminal domain superfamily CFM90_08380 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CFM90_08380 IPR028998 Ribosome maturation factor RimP, C-terminal CFM90_08380 IPR035956 RimP, N-terminal domain superfamily CFM90_08380 IPR028989 Ribosome maturation factor RimP, N-terminal CFM90_08380 IPR003728 Ribosome maturation factor RimP CFM90_08385 IPR036986 RNA-binding S4 domain superfamily CFM90_08385 IPR002942 RNA-binding S4 domain CFM90_08385 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CFM90_08385 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CFM90_08385 IPR006145 Pseudouridine synthase, RsuA/RluA CFM90_08385 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFM90_08390 IPR036390 Winged helix DNA-binding domain superfamily CFM90_08390 IPR005234 Chromosome segregation/condensation protein ScpB CFM90_08390 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_08400 IPR012318 Crp-type HTH domain CFM90_08400 IPR014710 RmlC-like jelly roll fold CFM90_08400 IPR018335 Transcription regulator HTH, Crp-type, conserved site CFM90_08400 IPR018490 Cyclic nucleotide-binding-like CFM90_08400 IPR000595 Cyclic nucleotide-binding domain CFM90_08400 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_08400 IPR036390 Winged helix DNA-binding domain superfamily CFM90_08415 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG CFM90_08415 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_08415 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_08415 IPR013783 Immunoglobulin-like fold CFM90_08415 IPR032879 FixG, C-terminal immunoglobulin-like domain CFM90_08420 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily CFM90_08420 IPR009056 Cytochrome c-like domain CFM90_08420 IPR036909 Cytochrome c-like domain superfamily CFM90_08420 IPR008168 Cytochrome c, class IC CFM90_08420 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CFM90_08420 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal CFM90_08435 IPR023616 Cytochrome c oxidase-like, subunit I domain CFM90_08435 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CFM90_08435 IPR000883 Cytochrome c oxidase subunit I CFM90_08435 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CFM90_08435 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CFM90_08445 IPR006121 Heavy metal-associated domain, HMA CFM90_08445 IPR027256 P-type ATPase, subfamily IB CFM90_08445 IPR036163 Heavy metal-associated domain superfamily CFM90_08445 IPR017969 Heavy-metal-associated, conserved site CFM90_08445 IPR023214 HAD superfamily CFM90_08445 IPR036412 HAD-like superfamily CFM90_08445 IPR008250 P-type ATPase, A domain superfamily CFM90_08445 IPR023298 P-type ATPase, transmembrane domain superfamily CFM90_08445 IPR001757 P-type ATPase CFM90_08445 IPR018303 P-type ATPase, phosphorylation site CFM90_08445 IPR023299 P-type ATPase, cytoplasmic domain N CFM90_08455 IPR005654 ATPase, AFG1-like CFM90_08455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08455 IPR030870 Cell division protein ZapE CFM90_08460 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CFM90_08460 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_08460 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFM90_08460 IPR006258 Dihydrolipoamide dehydrogenase CFM90_08460 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CFM90_08460 IPR023753 FAD/NAD(P)-binding domain CFM90_08460 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CFM90_08465 IPR000089 Biotin/lipoyl attachment CFM90_08465 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CFM90_08465 IPR011053 Single hybrid motif CFM90_08465 IPR004167 Peripheral subunit-binding domain CFM90_08465 IPR006255 Dihydrolipoamide succinyltransferase CFM90_08465 IPR036625 E3-binding domain superfamily CFM90_08465 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CFM90_08465 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CFM90_08470 IPR005475 Transketolase-like, pyrimidine-binding domain CFM90_08470 IPR029061 Thiamin diphosphate-binding fold CFM90_08470 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CFM90_08470 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CFM90_08470 IPR001017 Dehydrogenase, E1 component CFM90_08470 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain CFM90_08470 IPR011603 2-oxoglutarate dehydrogenase E1 component CFM90_08475 IPR030395 Glycerophosphodiester phosphodiesterase domain CFM90_08475 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CFM90_08480 IPR017871 ABC transporter, conserved site CFM90_08480 IPR003439 ABC transporter-like CFM90_08480 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC CFM90_08480 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_08480 IPR040582 MalK, OB fold domain CFM90_08480 IPR003593 AAA+ ATPase domain CFM90_08480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_08485 IPR035906 MetI-like superfamily CFM90_08485 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE CFM90_08490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_08490 IPR035906 MetI-like superfamily CFM90_08495 IPR006061 Solute-binding family 1, conserved site CFM90_08495 IPR006059 Bacterial extracellular solute-binding protein CFM90_08510 IPR010114 DNA-binding transcriptional regulator NtrC CFM90_08510 IPR025944 Sigma-54 interaction domain, conserved site CFM90_08510 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_08510 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_08510 IPR003593 AAA+ ATPase domain CFM90_08510 IPR011006 CheY-like superfamily CFM90_08510 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_08510 IPR009057 Homeobox-like domain superfamily CFM90_08510 IPR002197 DNA binding HTH domain, Fis-type CFM90_08510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08510 IPR001789 Signal transduction response regulator, receiver domain CFM90_08515 IPR035965 PAS domain superfamily CFM90_08515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_08515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_08515 IPR013767 PAS fold CFM90_08515 IPR000014 PAS domain CFM90_08515 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_08515 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_08515 IPR005467 Histidine kinase domain CFM90_08515 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_08560 IPR003593 AAA+ ATPase domain CFM90_08560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08560 IPR024590 RNA helicase HrpA, C-terminal CFM90_08560 IPR001650 Helicase, C-terminal CFM90_08560 IPR007502 Helicase-associated domain CFM90_08560 IPR011709 Domain of unknown function DUF1605 CFM90_08560 IPR011545 DEAD/DEAH box helicase domain CFM90_08560 IPR010222 RNA helicase HrpA CFM90_08560 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_08565 IPR000182 GNAT domain CFM90_08565 IPR010167 Amino-acid N-acetyltransferase CFM90_08565 IPR036393 Acetylglutamate kinase-like superfamily CFM90_08565 IPR016181 Acyl-CoA N-acyltransferase CFM90_08565 IPR033719 N-acetylglutamate synthase, kinase-like domain CFM90_08565 IPR001048 Aspartate/glutamate/uridylate kinase CFM90_08570 IPR001347 Sugar isomerase (SIS) CFM90_08570 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_08570 IPR035472 RpiR-like, SIS domain CFM90_08570 IPR000281 Helix-turn-helix protein RpiR CFM90_08570 IPR009057 Homeobox-like domain superfamily CFM90_08575 IPR004104 Oxidoreductase, C-terminal CFM90_08575 IPR036291 NAD(P)-binding domain superfamily CFM90_08575 IPR000683 Oxidoreductase, N-terminal CFM90_08585 IPR000683 Oxidoreductase, N-terminal CFM90_08585 IPR036291 NAD(P)-binding domain superfamily CFM90_08585 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase CFM90_08585 IPR004104 Oxidoreductase, C-terminal CFM90_08595 IPR036237 Xylose isomerase-like superfamily CFM90_08595 IPR013022 Xylose isomerase-like, TIM barrel domain CFM90_08600 IPR001851 ABC transporter, permease CFM90_08605 IPR003439 ABC transporter-like CFM90_08605 IPR017871 ABC transporter, conserved site CFM90_08605 IPR015861 ABC transporter, ribose import, RbsA CFM90_08605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08605 IPR003593 AAA+ ATPase domain CFM90_08610 IPR028082 Periplasmic binding protein-like I CFM90_08610 IPR025997 Periplasmic binding protein CFM90_08615 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes CFM90_08615 IPR030830 5-Dehydro-2-deoxygluconokinase CFM90_08615 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily CFM90_08615 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CFM90_08615 IPR029056 Ribokinase-like CFM90_08615 IPR011611 Carbohydrate kinase PfkB CFM90_08620 IPR012000 Thiamine pyrophosphate enzyme, central domain CFM90_08620 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CFM90_08620 IPR000399 TPP-binding enzyme, conserved site CFM90_08620 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CFM90_08620 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes CFM90_08620 IPR029061 Thiamin diphosphate-binding fold CFM90_08620 IPR029035 DHS-like NAD/FAD-binding domain superfamily CFM90_08620 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase CFM90_08625 IPR036237 Xylose isomerase-like superfamily CFM90_08625 IPR013022 Xylose isomerase-like, TIM barrel domain CFM90_08625 IPR030823 IolE/MocC family CFM90_08630 IPR021120 KduI/IolB isomerase CFM90_08630 IPR014710 RmlC-like jelly roll fold CFM90_08630 IPR024203 5-deoxy-glucuronate isomerase, IolB CFM90_08630 IPR011051 RmlC-like cupin domain superfamily CFM90_08630 IPR023770 5-deoxy-glucuronate isomerase, Bacilli CFM90_08635 IPR033900 Porin domain, Gram-negative type CFM90_08635 IPR023614 Porin domain superfamily CFM90_08635 IPR001702 Porin, Gram-negative type CFM90_08635 IPR013793 Porin, Gram-negative type, conserved site CFM90_08635 IPR002299 Porin, Neisseria sp. type CFM90_08640 IPR007457 Fe(II) trafficking protein YggX CFM90_08640 IPR036766 Fe(II) trafficking protein YggX superfamily CFM90_08645 IPR004090 Chemotaxis methyl-accepting receptor CFM90_08645 IPR003660 HAMP domain CFM90_08645 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_08650 IPR001248 Purine-cytosine permease CFM90_08650 IPR038271 Purine-cytosine permease superfamily CFM90_08650 IPR012681 Nucleobase cation symporter-1, NCS1 CFM90_08655 IPR004788 Ribose 5-phosphate isomerase, type A CFM90_08655 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CFM90_08655 IPR037171 NagB/RpiA transferase-like CFM90_08660 IPR004730 Transaldolase type 1 CFM90_08660 IPR018225 Transaldolase, active site CFM90_08660 IPR013785 Aldolase-type TIM barrel CFM90_08660 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CFM90_08665 IPR029035 DHS-like NAD/FAD-binding domain superfamily CFM90_08665 IPR003000 Sirtuin family CFM90_08665 IPR026591 Sirtuin, catalytic core small domain superfamily CFM90_08665 IPR027546 Sirtuin, class III CFM90_08665 IPR026590 Sirtuin family, catalytic core domain CFM90_08670 IPR001537 tRNA/rRNA methyltransferase, SpoU type CFM90_08670 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFM90_08670 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CFM90_08670 IPR004441 RNA methyltransferase TrmH family CFM90_08670 IPR029064 50S ribosomal protein L30e-like CFM90_08670 IPR029028 Alpha/beta knot methyltransferases CFM90_08670 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CFM90_08675 IPR003029 S1 domain CFM90_08675 IPR022967 RNA-binding domain, S1 CFM90_08675 IPR013668 Ribonuclease R winged-helix domain CFM90_08675 IPR013223 Ribonuclease B, N-terminal OB domain CFM90_08675 IPR004476 Ribonuclease II/ribonuclease R CFM90_08675 IPR001900 Ribonuclease II/R CFM90_08675 IPR011805 Ribonuclease R CFM90_08675 IPR011129 Cold shock domain CFM90_08675 IPR022966 Ribonuclease II/R, conserved site CFM90_08675 IPR040476 RNase II/RNase R, cold shock domain CFM90_08675 IPR012340 Nucleic acid-binding, OB-fold CFM90_08685 IPR023747 Xanthine-guanine phosphoribosyltransferase CFM90_08685 IPR029057 Phosphoribosyltransferase-like CFM90_08685 IPR000836 Phosphoribosyltransferase domain CFM90_08690 IPR018220 Adenylosuccinate synthase, GTP-binding site CFM90_08690 IPR042110 Adenylosuccinate synthetase, domain 2 CFM90_08690 IPR042109 Adenylosuccinate synthetase, domain 1 CFM90_08690 IPR042111 Adenylosuccinate synthetase, domain 3 CFM90_08690 IPR001114 Adenylosuccinate synthetase CFM90_08690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08690 IPR033128 Adenylosuccinate synthase, active site CFM90_08695 IPR004517 ATP phosphoribosyltransferase regulatory subunit CFM90_08695 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CFM90_08695 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CFM90_08705 IPR001107 Band 7 domain CFM90_08705 IPR036013 Band 7/SPFH domain superfamily CFM90_08705 IPR010200 HflC CFM90_08710 IPR036013 Band 7/SPFH domain superfamily CFM90_08710 IPR001972 Stomatin family CFM90_08710 IPR020980 Menbrane protein HflK, N-terminal CFM90_08710 IPR010201 HflK CFM90_08710 IPR001107 Band 7 domain CFM90_08715 IPR025121 GTPase HflX, N-terminal CFM90_08715 IPR006073 GTP binding domain CFM90_08715 IPR030394 HflX-type guanine nucleotide-binding (G) domain CFM90_08715 IPR035647 EF-G domain III/V-like CFM90_08715 IPR016496 GTPase HflX CFM90_08715 IPR042108 GTPase HflX, N-terminal domain superfamily CFM90_08715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08715 IPR032305 GTP-binding protein, middle domain CFM90_08720 IPR005001 RNA-binding protein Hfq CFM90_08720 IPR010920 LSM domain superfamily CFM90_08725 IPR003593 AAA+ ATPase domain CFM90_08725 IPR031166 EngA-type guanine nucleotide-binding (G) domain CFM90_08725 IPR016484 GTP-binding protein EngA CFM90_08725 IPR032859 GTPase Der, C-terminal KH-domain-like CFM90_08725 IPR015946 K homology domain-like, alpha/beta CFM90_08725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08725 IPR006073 GTP binding domain CFM90_08725 IPR005225 Small GTP-binding protein domain CFM90_08730 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CFM90_08730 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CFM90_08730 IPR002372 Pyrrolo-quinoline quinone repeat CFM90_08730 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CFM90_08730 IPR017687 Outer membrane protein assembly factor BamB CFM90_08735 IPR011990 Tetratricopeptide-like helical domain superfamily CFM90_08735 IPR018704 Tetratricopeptide repeat-like domain CFM90_08735 IPR026039 Uncharacterised protein family UPF0070 CFM90_08740 IPR033656 Histidyl-anticodon-binding CFM90_08740 IPR004154 Anticodon-binding CFM90_08740 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CFM90_08740 IPR015807 Histidine-tRNA ligase CFM90_08740 IPR036621 Anticodon-binding domain superfamily CFM90_08740 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CFM90_08740 IPR006195 Aminoacyl-tRNA synthetase, class II CFM90_08745 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CFM90_08745 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CFM90_08745 IPR011005 Dihydropteroate synthase-like CFM90_08760 IPR027492 Dual-specificity RNA methyltransferase RlmN CFM90_08760 IPR007197 Radical SAM CFM90_08760 IPR040072 Methyltransferase (Class A) CFM90_08760 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CFM90_08760 IPR013785 Aldolase-type TIM barrel CFM90_08765 IPR034907 Nucleoside diphosphate kinase-like domain CFM90_08765 IPR001564 Nucleoside diphosphate kinase CFM90_08765 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CFM90_08770 IPR006214 Bax inhibitor 1-related CFM90_08775 IPR012340 Nucleic acid-binding, OB-fold CFM90_08775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_08775 IPR002792 TRAM domain CFM90_08775 IPR030391 RNA methyltransferase TrmA, conserved site CFM90_08775 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CFM90_08775 IPR010280 (Uracil-5)-methyltransferase family CFM90_08785 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_08785 IPR012761 RNA polymerase sigma factor RpoS CFM90_08785 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_08785 IPR013325 RNA polymerase sigma factor, region 2 CFM90_08785 IPR007630 RNA polymerase sigma-70 region 4 CFM90_08785 IPR007624 RNA polymerase sigma-70 region 3 CFM90_08785 IPR000943 RNA polymerase sigma-70 CFM90_08785 IPR009042 RNA polymerase sigma-70 region 1.2 CFM90_08785 IPR007627 RNA polymerase sigma-70 region 2 CFM90_08785 IPR014284 RNA polymerase sigma-70 like domain CFM90_08790 IPR036779 LysM domain superfamily CFM90_08790 IPR011055 Duplicated hybrid motif CFM90_08790 IPR016047 Peptidase M23 CFM90_08790 IPR018392 LysM domain CFM90_08795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_08795 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CFM90_08800 IPR030048 Survival protein SurE CFM90_08800 IPR036523 SurE-like phosphatase/nucleotidase superfamily CFM90_08800 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CFM90_08805 IPR016039 Thiolase-like CFM90_08805 IPR009081 Phosphopantetheine binding ACP domain CFM90_08805 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CFM90_08805 IPR020843 Polyketide synthase, enoylreductase domain CFM90_08805 IPR042104 Polyketide synthase, dehydratase domain superfamily CFM90_08805 IPR001227 Acyl transferase domain superfamily CFM90_08805 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFM90_08805 IPR013968 Polyketide synthase, ketoreductase domain CFM90_08805 IPR036736 ACP-like superfamily CFM90_08805 IPR018201 Beta-ketoacyl synthase, active site CFM90_08805 IPR014043 Acyl transferase CFM90_08805 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CFM90_08805 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_08805 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_08805 IPR011032 GroES-like superfamily CFM90_08805 IPR014031 Beta-ketoacyl synthase, C-terminal CFM90_08805 IPR020807 Polyketide synthase, dehydratase domain CFM90_08805 IPR014030 Beta-ketoacyl synthase, N-terminal CFM90_08805 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CFM90_08805 IPR036291 NAD(P)-binding domain superfamily CFM90_08805 IPR032821 Ketoacyl-synthetase, C-terminal extension CFM90_08810 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CFM90_08810 IPR013785 Aldolase-type TIM barrel CFM90_08815 IPR001647 DNA-binding HTH domain, TetR-type CFM90_08815 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CFM90_08815 IPR009057 Homeobox-like domain superfamily CFM90_08815 IPR011075 Tetracyclin repressor-like, C-terminal domain CFM90_08820 IPR035906 MetI-like superfamily CFM90_08820 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_08825 IPR003593 AAA+ ATPase domain CFM90_08825 IPR003439 ABC transporter-like CFM90_08825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08835 IPR003673 CoA-transferase family III CFM90_08835 IPR023606 CoA-transferase family III domain superfamily CFM90_08850 IPR034137 RecR, TOPRIM domain CFM90_08850 IPR006171 TOPRIM domain CFM90_08850 IPR023628 Recombination protein RecR, C4-type zinc finger CFM90_08850 IPR023627 Recombination protein RecR CFM90_08850 IPR000093 DNA recombination protein RecR CFM90_08855 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CFM90_08855 IPR004401 Nucleoid-associated protein YbaB/EbfC family CFM90_08860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08860 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily CFM90_08860 IPR021029 DNA polymerase III, tau subunit, domain V CFM90_08860 IPR001270 ClpA/B family CFM90_08860 IPR022754 DNA polymerase III, gamma subunit, domain III CFM90_08860 IPR003593 AAA+ ATPase domain CFM90_08860 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CFM90_08860 IPR012763 DNA polymerase III, subunit gamma/ tau CFM90_08860 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV CFM90_08870 IPR014017 UvrD-like DNA helicase, C-terminal CFM90_08870 IPR000212 DNA helicase, UvrD/REP type CFM90_08870 IPR034739 UvrD/AddA helicase, N-terminal CFM90_08870 IPR014152 DNA helicase subunit AddA CFM90_08870 IPR014016 UvrD-like helicase, ATP-binding domain CFM90_08870 IPR011335 Restriction endonuclease type II-like CFM90_08870 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CFM90_08870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08870 IPR011604 Exonuclease, phage-type/RecB, C-terminal CFM90_08880 IPR013766 Thioredoxin domain CFM90_08880 IPR017937 Thioredoxin, conserved site CFM90_08880 IPR036249 Thioredoxin-like superfamily CFM90_08880 IPR005746 Thioredoxin CFM90_08885 IPR036269 Rho termination factor, N-terminal domain superfamily CFM90_08885 IPR011112 Rho termination factor, N-terminal CFM90_08885 IPR041703 Transcription termination factor Rho, ATP binding domain CFM90_08885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08885 IPR003593 AAA+ ATPase domain CFM90_08885 IPR011129 Cold shock domain CFM90_08885 IPR012340 Nucleic acid-binding, OB-fold CFM90_08885 IPR011113 Rho termination factor, RNA-binding domain CFM90_08885 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CFM90_08885 IPR004665 Transcription termination factor Rho CFM90_08890 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_08890 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_08890 IPR001789 Signal transduction response regulator, receiver domain CFM90_08890 IPR025944 Sigma-54 interaction domain, conserved site CFM90_08890 IPR003593 AAA+ ATPase domain CFM90_08890 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_08890 IPR011006 CheY-like superfamily CFM90_08890 IPR009057 Homeobox-like domain superfamily CFM90_08890 IPR002197 DNA binding HTH domain, Fis-type CFM90_08890 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08895 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_08895 IPR001789 Signal transduction response regulator, receiver domain CFM90_08895 IPR011006 CheY-like superfamily CFM90_08895 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_08895 IPR000792 Transcription regulator LuxR, C-terminal CFM90_08900 IPR042252 MtfA, N-terminal CFM90_08900 IPR024079 Metallopeptidase, catalytic domain superfamily CFM90_08900 IPR010384 MtfA family CFM90_08910 IPR034704 L28p-like CFM90_08910 IPR002150 Ribosomal protein L31 CFM90_08910 IPR027493 Ribosomal protein L31 type B CFM90_08910 IPR042105 Ribosomal protein L31 superfamily CFM90_08920 IPR002528 Multi antimicrobial extrusion protein CFM90_08955 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CFM90_08955 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 CFM90_08955 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CFM90_08955 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFM90_08955 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CFM90_08955 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CFM90_08955 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_08955 IPR033910 Glutamyl-tRNA synthetase CFM90_08955 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CFM90_08960 IPR002641 Patatin-like phospholipase domain CFM90_08960 IPR001423 Lysophospholipase patatin, conserved site CFM90_08960 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CFM90_08965 IPR000064 Endopeptidase, NLPC/P60 domain CFM90_08965 IPR038765 Papain-like cysteine peptidase superfamily CFM90_08970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_08970 IPR003439 ABC transporter-like CFM90_08970 IPR017871 ABC transporter, conserved site CFM90_08970 IPR003593 AAA+ ATPase domain CFM90_08970 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CFM90_08975 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CFM90_08975 IPR035906 MetI-like superfamily CFM90_08975 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_08980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_08980 IPR035906 MetI-like superfamily CFM90_08985 IPR039424 Solute-binding protein family 5 CFM90_08985 IPR000914 Solute-binding protein family 5 domain CFM90_08985 IPR030678 Peptide/nickel binding protein, MppA-type CFM90_08990 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CFM90_08990 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_08990 IPR036291 NAD(P)-binding domain superfamily CFM90_09000 IPR002912 ACT domain CFM90_09000 IPR041740 Aspartokinase catalytic domain CFM90_09000 IPR027795 CASTOR, ACT domain CFM90_09000 IPR018042 Aspartate kinase, conserved site CFM90_09000 IPR036393 Acetylglutamate kinase-like superfamily CFM90_09000 IPR001341 Aspartate kinase CFM90_09000 IPR005260 Aspartate kinase, monofunctional class CFM90_09000 IPR001048 Aspartate/glutamate/uridylate kinase CFM90_09005 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain CFM90_09005 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CFM90_09005 IPR012094 tRNA(Ile)-lysidine synthase CFM90_09005 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CFM90_09005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_09005 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CFM90_09010 IPR029045 ClpP/crotonase-like domain superfamily CFM90_09010 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CFM90_09010 IPR001095 Acetyl-CoA carboxylase, alpha subunit CFM90_09015 IPR011257 DNA glycosylase CFM90_09015 IPR003265 HhH-GPD domain CFM90_09020 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CFM90_09020 IPR032678 tRNA synthetases class I, catalytic domain CFM90_09020 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFM90_09020 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CFM90_09020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_09020 IPR015803 Cysteine-tRNA ligase CFM90_09030 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CFM90_09030 IPR029000 Cyclophilin-like domain superfamily CFM90_09030 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CFM90_09030 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CFM90_09035 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CFM90_09035 IPR029000 Cyclophilin-like domain superfamily CFM90_09035 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CFM90_09035 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CFM90_09040 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CFM90_09040 IPR010138 UDP-2,3-diacylglucosamine hydrolase CFM90_09045 IPR001451 Hexapeptide repeat CFM90_09045 IPR018357 Hexapeptide transferase, conserved site CFM90_09045 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CFM90_09045 IPR005881 Serine O-acetyltransferase CFM90_09045 IPR011004 Trimeric LpxA-like superfamily CFM90_09050 IPR029028 Alpha/beta knot methyltransferases CFM90_09050 IPR004384 RNA methyltransferase TrmJ/LasT CFM90_09050 IPR001537 tRNA/rRNA methyltransferase, SpoU type CFM90_09050 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFM90_09055 IPR022337 Inositol monophosphatase, SuhB CFM90_09055 IPR000760 Inositol monophosphatase-like CFM90_09055 IPR020583 Inositol monophosphatase, metal-binding site CFM90_09055 IPR020550 Inositol monophosphatase, conserved site CFM90_09055 IPR033942 Inositol monophosphatase CFM90_09060 IPR001387 Cro/C1-type helix-turn-helix domain CFM90_09060 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily CFM90_09060 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_09060 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain CFM90_09065 IPR029062 Class I glutamine amidotransferase-like CFM90_09065 IPR017926 Glutamine amidotransferase CFM90_09070 IPR005302 Molybdenum cofactor sulfurase, C-terminal CFM90_09070 IPR005163 3-alpha domain CFM90_09070 IPR011037 Pyruvate kinase-like, insert domain superfamily CFM90_09075 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_09075 IPR004090 Chemotaxis methyl-accepting receptor CFM90_09075 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_09075 IPR003660 HAMP domain CFM90_09075 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_09075 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_09080 IPR003660 HAMP domain CFM90_09080 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_09080 IPR033480 Single Cache domain 2 CFM90_09080 IPR004090 Chemotaxis methyl-accepting receptor CFM90_09085 IPR036812 NADP-dependent oxidoreductase domain superfamily CFM90_09085 IPR023210 NADP-dependent oxidoreductase domain CFM90_09085 IPR018170 Aldo/keto reductase, conserved site CFM90_09085 IPR020471 Aldo/keto reductase CFM90_09090 IPR020846 Major facilitator superfamily domain CFM90_09090 IPR011701 Major facilitator superfamily CFM90_09090 IPR036259 MFS transporter superfamily CFM90_09095 IPR036390 Winged helix DNA-binding domain superfamily CFM90_09095 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_09095 IPR000847 Transcription regulator HTH, LysR CFM90_09095 IPR005119 LysR, substrate-binding CFM90_09135 IPR006430 Phage portal protein PBSX family CFM90_09135 IPR030935 Phage portal protein PBSX family, Proteobacteria CFM90_09220 IPR011083 Phage tail collar domain CFM90_09220 IPR037053 Phage tail collar domain superfamily CFM90_09275 IPR001525 C-5 cytosine methyltransferase CFM90_09275 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CFM90_09275 IPR018117 DNA methylase, C-5 cytosine-specific, active site CFM90_09275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_09330 IPR017261 DNA mismatch repair protein MutS/MSH CFM90_09330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_09330 IPR016151 DNA mismatch repair protein MutS, N-terminal CFM90_09330 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CFM90_09330 IPR007696 DNA mismatch repair protein MutS, core CFM90_09330 IPR005748 DNA mismatch repair protein MutS CFM90_09330 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CFM90_09330 IPR036678 MutS, connector domain superfamily CFM90_09330 IPR000432 DNA mismatch repair protein MutS, C-terminal CFM90_09330 IPR007860 DNA mismatch repair protein MutS, connector domain CFM90_09330 IPR007861 DNA mismatch repair protein MutS, clamp CFM90_09340 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CFM90_09345 IPR003347 JmjC domain CFM90_09345 IPR039994 JmjC domain-containing CFM90_09355 IPR013471 Ribonuclease Z/BN CFM90_09355 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_09355 IPR001279 Metallo-beta-lactamase CFM90_09360 IPR010653 NlpB/DapX lipoprotein CFM90_09360 IPR014524 Outer membrane protein assembly factor BamC CFM90_09360 IPR042268 Outer membrane protein assembly factor BamC, C-terminal CFM90_09365 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CFM90_09365 IPR002220 DapA-like CFM90_09365 IPR020625 Schiff base-forming aldolase, active site CFM90_09365 IPR013785 Aldolase-type TIM barrel CFM90_09375 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFM90_09375 IPR002305 Aminoacyl-tRNA synthetase, class Ic CFM90_09375 IPR002306 Tryptophan-tRNA ligase CFM90_09375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_09380 IPR008915 Peptidase M50 CFM90_09385 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CFM90_09385 IPR006070 YrdC-like domain CFM90_09390 IPR016195 Polymerase/histidinol phosphatase-like CFM90_09390 IPR003141 Polymerase/histidinol phosphatase, N-terminal CFM90_09390 IPR004013 PHP domain CFM90_09395 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_09395 IPR022890 Ferredoxin--NADP reductase, type 2 CFM90_09395 IPR023753 FAD/NAD(P)-binding domain CFM90_09415 IPR029058 Alpha/Beta hydrolase fold CFM90_09415 IPR000073 Alpha/beta hydrolase fold-1 CFM90_09415 IPR019913 Pyrimidine utilisation protein RutD CFM90_09420 IPR007402 Protein of unknown function DUF455 CFM90_09420 IPR009078 Ferritin-like superfamily CFM90_09420 IPR011197 Uncharacterised conserved protein UCP012318 CFM90_09425 IPR011004 Trimeric LpxA-like superfamily CFM90_09425 IPR001451 Hexapeptide repeat CFM90_09430 IPR016153 Heat shock protein Hsp33, N-terminal CFM90_09430 IPR000397 Heat shock protein Hsp33 CFM90_09430 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CFM90_09430 IPR016154 Heat shock protein Hsp33, C-terminal CFM90_09440 IPR023081 Cell division protein FtsB CFM90_09440 IPR007060 Septum formation initiator FtsL/DivIC CFM90_09445 IPR020811 Enolase, N-terminal CFM90_09445 IPR000941 Enolase CFM90_09445 IPR036849 Enolase-like, C-terminal domain superfamily CFM90_09445 IPR029017 Enolase-like, N-terminal CFM90_09445 IPR020810 Enolase, C-terminal TIM barrel domain CFM90_09445 IPR020809 Enolase, conserved site CFM90_09455 IPR006269 3-deoxy-8-phosphooctulonate synthase CFM90_09455 IPR006218 DAHP synthetase I/KDSA CFM90_09455 IPR013785 Aldolase-type TIM barrel CFM90_09460 IPR004468 CTP synthase CFM90_09460 IPR017456 CTP synthase, N-terminal CFM90_09460 IPR029062 Class I glutamine amidotransferase-like CFM90_09460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_09460 IPR017926 Glutamine amidotransferase CFM90_09460 IPR033828 CTP synthase GATase domain CFM90_09465 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal CFM90_09465 IPR029058 Alpha/Beta hydrolase fold CFM90_09465 IPR000073 Alpha/beta hydrolase fold-1 CFM90_09465 IPR000639 Epoxide hydrolase-like CFM90_09475 IPR002931 Transglutaminase-like CFM90_09475 IPR038765 Papain-like cysteine peptidase superfamily CFM90_09475 IPR013589 Bacterial transglutaminase-like, N-terminal CFM90_09485 IPR025841 Circularly permuted ATP-grasp type 2 CFM90_09485 IPR016450 Uncharacterised conserved protein UCP005522 CFM90_09490 IPR035681 ComA-like, MBL domain CFM90_09490 IPR004797 Competence protein ComEC/Rec2 CFM90_09490 IPR001279 Metallo-beta-lactamase CFM90_09490 IPR004477 ComEC/Rec2-related protein CFM90_09490 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_09495 IPR018228 Deoxyribonuclease, TatD-related, conserved site CFM90_09495 IPR001130 TatD family CFM90_09495 IPR032466 Metal-dependent hydrolase CFM90_09500 IPR003439 ABC transporter-like CFM90_09500 IPR011924 Lipoprotein releasing system, ATP-binding protein CFM90_09500 IPR015854 ABC transporter, lipoprotein release, LolD CFM90_09500 IPR003593 AAA+ ATPase domain CFM90_09500 IPR017871 ABC transporter, conserved site CFM90_09500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_09505 IPR025857 MacB-like periplasmic core domain CFM90_09505 IPR003838 ABC transporter permease protein domain CFM90_09505 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CFM90_09515 IPR004610 Bacterial RecJ exonuclease CFM90_09515 IPR003156 DHHA1 domain CFM90_09515 IPR038763 DHH phosphoesterase superfamily CFM90_09515 IPR001667 DDH domain CFM90_09515 IPR041122 RecJ, OB domain CFM90_09520 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_09520 IPR022569 Ferredoxin, C-terminal CFM90_09520 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_09520 IPR000813 7Fe ferredoxin CFM90_09530 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_09530 IPR001387 Cro/C1-type helix-turn-helix domain CFM90_09535 IPR003959 ATPase, AAA-type, core CFM90_09535 IPR003593 AAA+ ATPase domain CFM90_09535 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_09535 IPR015947 PUA-like superfamily CFM90_09535 IPR008268 Peptidase S16, active site CFM90_09535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_09535 IPR003111 Lon, substrate-binding domain CFM90_09535 IPR027065 Lon protease CFM90_09535 IPR008269 Peptidase S16, Lon proteolytic domain CFM90_09535 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_09535 IPR004815 Lon protease, bacterial/eukaryotic-type CFM90_09535 IPR027543 Lon protease, bacterial CFM90_09545 IPR008490 Transposase InsH, N-terminal CFM90_09545 IPR002559 Transposase, IS4-like CFM90_09560 IPR009057 Homeobox-like domain superfamily CFM90_09560 IPR038965 Transposase InsF-like CFM90_09580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_09580 IPR003593 AAA+ ATPase domain CFM90_09580 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CFM90_09580 IPR002611 IstB-like ATP-binding protein CFM90_09585 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type CFM90_09585 IPR036397 Ribonuclease H superfamily CFM90_09585 IPR012337 Ribonuclease H-like superfamily CFM90_09585 IPR001584 Integrase, catalytic core CFM90_09595 IPR008490 Transposase InsH, N-terminal CFM90_09595 IPR002559 Transposase, IS4-like CFM90_09655 IPR004107 Integrase, SAM-like, N-terminal CFM90_09655 IPR011932 Tyrosine recombinase XerD CFM90_09655 IPR010998 Integrase/recombinase, N-terminal CFM90_09655 IPR002104 Integrase, catalytic domain CFM90_09655 IPR013762 Integrase-like, catalytic domain superfamily CFM90_09655 IPR011010 DNA breaking-rejoining enzyme, catalytic core CFM90_09655 IPR011931 Tyrosine recombinase XerC CFM90_09655 IPR023009 Tyrosine recombinase XerC/XerD CFM90_09675 IPR018383 Uncharacterised protein family UPF0324, prokaryote CFM90_09675 IPR004630 Uncharacterised protein family UPF0324, bacteria CFM90_09680 IPR000847 Transcription regulator HTH, LysR CFM90_09680 IPR005119 LysR, substrate-binding CFM90_09680 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_09680 IPR036390 Winged helix DNA-binding domain superfamily CFM90_09705 IPR002912 ACT domain CFM90_09705 IPR002376 Formyl transferase, N-terminal CFM90_09705 IPR036477 Formyl transferase, N-terminal domain superfamily CFM90_09705 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CFM90_09705 IPR004810 Formyltetrahydrofolate deformylase CFM90_09720 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CFM90_09720 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal CFM90_09720 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CFM90_09720 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_09720 IPR023753 FAD/NAD(P)-binding domain CFM90_09720 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CFM90_09720 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CFM90_09720 IPR041117 SoxA, A3 domain CFM90_09720 IPR006277 Sarcosine oxidase, alpha subunit CFM90_09720 IPR006222 Aminomethyltransferase, folate-binding domain CFM90_09725 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric CFM90_09725 IPR038561 Sarcosine oxidase subunit delta superfamily CFM90_09730 IPR006278 Sarcosine oxidase subunit beta CFM90_09730 IPR006076 FAD dependent oxidoreductase CFM90_09730 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_09740 IPR018060 DNA binding HTH domain, AraC-type CFM90_09740 IPR018062 HTH domain AraC-type, conserved site CFM90_09740 IPR009057 Homeobox-like domain superfamily CFM90_09740 IPR002818 DJ-1/PfpI CFM90_09740 IPR029062 Class I glutamine amidotransferase-like CFM90_09745 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_09745 IPR001387 Cro/C1-type helix-turn-helix domain CFM90_09760 IPR036390 Winged helix DNA-binding domain superfamily CFM90_09760 IPR005119 LysR, substrate-binding CFM90_09760 IPR000847 Transcription regulator HTH, LysR CFM90_09760 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_09765 IPR036259 MFS transporter superfamily CFM90_09765 IPR011701 Major facilitator superfamily CFM90_09765 IPR020846 Major facilitator superfamily domain CFM90_09770 IPR036390 Winged helix DNA-binding domain superfamily CFM90_09770 IPR005119 LysR, substrate-binding CFM90_09770 IPR000847 Transcription regulator HTH, LysR CFM90_09770 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_09775 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CFM90_09775 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CFM90_09775 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CFM90_09775 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_09775 IPR001433 Oxidoreductase FAD/NAD(P)-binding CFM90_09775 IPR017938 Riboflavin synthase-like beta-barrel CFM90_09775 IPR012675 Beta-grasp domain superfamily CFM90_09775 IPR017927 FAD-binding domain, ferredoxin reductase-type CFM90_09775 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_09775 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CFM90_09780 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CFM90_09780 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CFM90_09780 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CFM90_09780 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CFM90_09780 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CFM90_09785 IPR000391 Ring-hydroxylating dioxygenase beta subunit CFM90_09785 IPR037401 SnoaL-like domain CFM90_09785 IPR032710 NTF2-like domain superfamily CFM90_09790 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CFM90_09790 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CFM90_09795 IPR013096 Cupin 2, conserved barrel CFM90_09795 IPR011051 RmlC-like cupin domain superfamily CFM90_09795 IPR014710 RmlC-like jelly roll fold CFM90_09800 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CFM90_09800 IPR011234 Fumarylacetoacetase-like, C-terminal CFM90_09805 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_09805 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_09805 IPR004045 Glutathione S-transferase, N-terminal CFM90_09805 IPR004046 Glutathione S-transferase, C-terminal CFM90_09805 IPR005955 Glutathione S-transferases, class Zeta CFM90_09805 IPR034333 Glutathione S-transferases, class Zeta , N-terminal CFM90_09805 IPR034330 Glutathione S-transferases, class Zeta , C-terminal CFM90_09805 IPR040079 Glutathione Transferase family CFM90_09805 IPR036249 Thioredoxin-like superfamily CFM90_09810 IPR002299 Porin, Neisseria sp. type CFM90_09810 IPR033900 Porin domain, Gram-negative type CFM90_09810 IPR023614 Porin domain superfamily CFM90_09810 IPR001702 Porin, Gram-negative type CFM90_09820 IPR033900 Porin domain, Gram-negative type CFM90_09820 IPR023614 Porin domain superfamily CFM90_09820 IPR001702 Porin, Gram-negative type CFM90_09820 IPR002299 Porin, Neisseria sp. type CFM90_09825 IPR017853 Glycoside hydrolase superfamily CFM90_09825 IPR011013 Galactose mutarotase-like domain superfamily CFM90_09825 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 CFM90_09825 IPR013780 Glycosyl hydrolase, all-beta CFM90_09825 IPR000322 Glycoside hydrolase family 31 CFM90_09825 IPR033403 Domain of unknown function DUF5110 CFM90_09825 IPR025887 Glycoside hydrolase family 31, N-terminal domain CFM90_09825 IPR030459 Glycosyl hydrolases family 31, conserved site CFM90_09825 IPR030458 Glycosyl hydrolases family 31, active site CFM90_09830 IPR020846 Major facilitator superfamily domain CFM90_09830 IPR036259 MFS transporter superfamily CFM90_09830 IPR011701 Major facilitator superfamily CFM90_09835 IPR036849 Enolase-like, C-terminal domain superfamily CFM90_09835 IPR034593 Mandelate racemase-like CFM90_09835 IPR034598 D-Glucarate dehydratase-like CFM90_09835 IPR017653 Glucarate dehydratase CFM90_09835 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CFM90_09835 IPR029017 Enolase-like, N-terminal CFM90_09835 IPR029065 Enolase C-terminal domain-like CFM90_09835 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CFM90_09840 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_09840 IPR036390 Winged helix DNA-binding domain superfamily CFM90_09840 IPR008920 Transcription regulator FadR/GntR, C-terminal CFM90_09840 IPR011711 GntR, C-terminal CFM90_09840 IPR000524 Transcription regulator HTH, GntR CFM90_09850 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_09850 IPR039420 Transcriptional regulatory protein WalR-like CFM90_09850 IPR001789 Signal transduction response regulator, receiver domain CFM90_09850 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_09850 IPR011006 CheY-like superfamily CFM90_09850 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_09860 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_09860 IPR031967 PhoR, single Cache-like domain CFM90_09860 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_09860 IPR000014 PAS domain CFM90_09860 IPR035965 PAS domain superfamily CFM90_09860 IPR013767 PAS fold CFM90_09860 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_09860 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_09860 IPR005467 Histidine kinase domain CFM90_09860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_09870 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CFM90_09870 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_09870 IPR039420 Transcriptional regulatory protein WalR-like CFM90_09870 IPR011006 CheY-like superfamily CFM90_09870 IPR001789 Signal transduction response regulator, receiver domain CFM90_09870 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_09870 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_09890 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CFM90_09890 IPR000462 CDP-alcohol phosphatidyltransferase CFM90_09890 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial CFM90_09895 IPR000305 GIY-YIG endonuclease CFM90_09895 IPR001162 UvrC family homology region CFM90_09895 IPR035901 GIY-YIG endonuclease superfamily CFM90_09895 IPR038476 UvrC homology region 2 superfamily CFM90_09895 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CFM90_09895 IPR010994 RuvA domain 2-like CFM90_09895 IPR004791 UvrABC system, subunit C CFM90_09895 IPR036876 UVR domain superfamily CFM90_09895 IPR001943 UVR domain CFM90_09905 IPR015365 Elongation factor P, C-terminal CFM90_09905 IPR001059 Translation elongation factor P/YeiP, central CFM90_09905 IPR013852 Translation elongation factor P/YeiP, conserved site CFM90_09905 IPR014722 Ribosomal protein L2, domain 2 CFM90_09905 IPR012340 Nucleic acid-binding, OB-fold CFM90_09905 IPR013185 Translation elongation factor, KOW-like CFM90_09905 IPR008991 Translation protein SH3-like domain superfamily CFM90_09905 IPR011768 Translation elongation factor P CFM90_09905 IPR020599 Translation elongation factor P/YeiP CFM90_09910 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CFM90_09910 IPR019800 Glycoside hydrolase, family 3, active site CFM90_09910 IPR022956 Beta-hexosaminidase, bacterial CFM90_09910 IPR017853 Glycoside hydrolase superfamily CFM90_09910 IPR001764 Glycoside hydrolase, family 3, N-terminal CFM90_09915 IPR004568 Phosphopantetheine-protein transferase domain CFM90_09915 IPR008278 4'-phosphopantetheinyl transferase domain CFM90_09915 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CFM90_09915 IPR002582 Holo-[acyl carrier protein] synthase CFM90_09920 IPR036130 Pyridoxine 5'-phosphate synthase CFM90_09920 IPR013785 Aldolase-type TIM barrel CFM90_09920 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CFM90_09925 IPR003717 Recombination protein O, RecO CFM90_09925 IPR037278 ARFGAP/RecO-like zinc finger CFM90_09925 IPR022572 DNA replication/recombination mediator RecO, N-terminal CFM90_09925 IPR012340 Nucleic acid-binding, OB-fold CFM90_09930 IPR009019 K homology domain superfamily, prokaryotic type CFM90_09930 IPR006073 GTP binding domain CFM90_09930 IPR004044 K Homology domain, type 2 CFM90_09930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_09930 IPR015946 K homology domain-like, alpha/beta CFM90_09930 IPR005225 Small GTP-binding protein domain CFM90_09930 IPR030388 Era-type guanine nucleotide-binding (G) domain CFM90_09930 IPR005662 GTP-binding protein Era CFM90_09935 IPR014720 Double-stranded RNA-binding domain CFM90_09935 IPR011907 Ribonuclease III CFM90_09935 IPR000999 Ribonuclease III domain CFM90_09935 IPR036389 Ribonuclease III, endonuclease domain superfamily CFM90_09945 IPR000223 Peptidase S26A, signal peptidase I CFM90_09945 IPR036286 LexA/Signal peptidase-like superfamily CFM90_09945 IPR019756 Peptidase S26A, signal peptidase I, serine active site CFM90_09945 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CFM90_09945 IPR019758 Peptidase S26A, signal peptidase I, conserved site CFM90_09945 IPR019533 Peptidase S26 CFM90_09950 IPR004161 Translation elongation factor EFTu-like, domain 2 CFM90_09950 IPR000640 Elongation factor EFG, domain V-like CFM90_09950 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_09950 IPR005225 Small GTP-binding protein domain CFM90_09950 IPR000795 Transcription factor, GTP-binding domain CFM90_09950 IPR013842 GTP-binding protein LepA, C-terminal CFM90_09950 IPR038363 LepA, C-terminal domain superfamily CFM90_09950 IPR031157 Tr-type G domain, conserved site CFM90_09950 IPR035654 Elongation factor 4, domain IV CFM90_09950 IPR006297 Elongation factor 4 CFM90_09950 IPR035647 EF-G domain III/V-like CFM90_09960 IPR041489 PDZ domain 6 CFM90_09960 IPR036034 PDZ superfamily CFM90_09960 IPR011782 Peptidase S1C, Do CFM90_09960 IPR009003 Peptidase S1, PA clan CFM90_09960 IPR001940 Peptidase S1C CFM90_09960 IPR001478 PDZ domain CFM90_09975 IPR039425 RNA polymerase sigma-70 like CFM90_09975 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CFM90_09975 IPR007627 RNA polymerase sigma-70 region 2 CFM90_09975 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CFM90_09975 IPR014286 RNA polymerase sigma-70 RpoE type CFM90_09975 IPR013325 RNA polymerase sigma factor, region 2 CFM90_09975 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_09975 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_09975 IPR014284 RNA polymerase sigma-70 like domain CFM90_09985 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CFM90_09985 IPR014030 Beta-ketoacyl synthase, N-terminal CFM90_09985 IPR016039 Thiolase-like CFM90_09985 IPR000794 Beta-ketoacyl synthase CFM90_09985 IPR018201 Beta-ketoacyl synthase, active site CFM90_09985 IPR014031 Beta-ketoacyl synthase, C-terminal CFM90_09985 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFM90_09990 IPR003231 Acyl carrier protein (ACP) CFM90_09990 IPR036736 ACP-like superfamily CFM90_09990 IPR009081 Phosphopantetheine binding ACP domain CFM90_09990 IPR006162 Phosphopantetheine attachment site CFM90_09995 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_09995 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_09995 IPR036291 NAD(P)-binding domain superfamily CFM90_09995 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CFM90_10000 IPR024925 Malonyl CoA-acyl carrier protein transacylase CFM90_10000 IPR001227 Acyl transferase domain superfamily CFM90_10000 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CFM90_10000 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CFM90_10000 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CFM90_10000 IPR014043 Acyl transferase CFM90_10005 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CFM90_10005 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CFM90_10005 IPR016039 Thiolase-like CFM90_10005 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CFM90_10010 IPR003664 Fatty acid synthesis PlsX protein CFM90_10010 IPR012281 Phospholipid biosynthesis protein, PlsX-like CFM90_10015 IPR002677 Ribosomal protein L32p CFM90_10015 IPR011332 Zinc-binding ribosomal protein CFM90_10020 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria CFM90_10020 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CFM90_10025 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CFM90_10025 IPR029001 Inosine triphosphate pyrophosphatase-like CFM90_10030 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CFM90_10030 IPR008189 rRNA small subunit methyltransferase I CFM90_10030 IPR014777 Tetrapyrrole methylase, subdomain 1 CFM90_10030 IPR035996 Tetrapyrrole methylase superfamily CFM90_10030 IPR014776 Tetrapyrrole methylase, subdomain 2 CFM90_10030 IPR000878 Tetrapyrrole methylase CFM90_10035 IPR004670 Na+/H+ antiporter NhaA CFM90_10035 IPR002142 Peptidase S49 CFM90_10035 IPR029045 ClpP/crotonase-like domain superfamily CFM90_10035 IPR023171 Na/H antiporter domain superfamily CFM90_10045 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CFM90_10045 IPR036412 HAD-like superfamily CFM90_10045 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CFM90_10045 IPR041492 Haloacid dehalogenase-like hydrolase CFM90_10045 IPR006439 HAD hydrolase, subfamily IA CFM90_10045 IPR037512 Phosphoglycolate phosphatase, prokaryotic CFM90_10045 IPR023214 HAD superfamily CFM90_10050 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFM90_10050 IPR006225 Pseudouridine synthase, RluC/RluD CFM90_10050 IPR036986 RNA-binding S4 domain superfamily CFM90_10050 IPR006145 Pseudouridine synthase, RsuA/RluA CFM90_10050 IPR002942 RNA-binding S4 domain CFM90_10050 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CFM90_10055 IPR021968 Polyribonucleotide phosphorylase C-terminal CFM90_10055 IPR012340 Nucleic acid-binding, OB-fold CFM90_10055 IPR004659 Ribonuclease E/G CFM90_10055 IPR003029 S1 domain CFM90_10055 IPR028878 Ribonuclease E CFM90_10055 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CFM90_10055 IPR022967 RNA-binding domain, S1 CFM90_10060 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CFM90_10060 IPR013483 Molybdenum cofactor biosynthesis protein A CFM90_10060 IPR010505 Molybdenum cofactor synthesis C-terminal CFM90_10060 IPR007197 Radical SAM CFM90_10060 IPR013785 Aldolase-type TIM barrel CFM90_10060 IPR006638 Elp3/MiaB/NifB CFM90_10065 IPR013482 Molybdenum cofactor guanylyltransferase CFM90_10065 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_10065 IPR025877 MobA-like NTP transferase CFM90_10070 IPR008284 Molybdenum cofactor biosynthesis, conserved site CFM90_10070 IPR001453 MoaB/Mog domain CFM90_10070 IPR036425 MoaB/Mog-like domain superfamily CFM90_10070 IPR038987 Molybdopterin biosynthesis protein MoeA-like CFM90_10070 IPR005111 MoeA, C-terminal, domain IV CFM90_10070 IPR036688 MoeA, C-terminal, domain IV superfamily CFM90_10070 IPR005110 MoeA, N-terminal and linker domain CFM90_10070 IPR036135 MoeA, N-terminal and linker domain superfamily CFM90_10080 IPR003798 DNA recombination RmuC CFM90_10085 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CFM90_10085 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CFM90_10085 IPR036291 NAD(P)-binding domain superfamily CFM90_10085 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFM90_10085 IPR023756 Glyoxylate/hydroxypyruvate reductase B CFM90_10095 IPR037171 NagB/RpiA transferase-like CFM90_10095 IPR003741 LUD domain CFM90_10095 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CFM90_10100 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase CFM90_10100 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CFM90_10100 IPR007229 Nicotinate phosphoribosyltransferase family CFM90_10100 IPR006406 Nicotinate phosphoribosyltransferase CFM90_10100 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain CFM90_10110 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_10110 IPR036291 NAD(P)-binding domain superfamily CFM90_10110 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_10115 IPR012340 Nucleic acid-binding, OB-fold CFM90_10115 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CFM90_10115 IPR006195 Aminoacyl-tRNA synthetase, class II CFM90_10115 IPR002313 Lysine-tRNA ligase, class II CFM90_10115 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CFM90_10115 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CFM90_10125 IPR012337 Ribonuclease H-like superfamily CFM90_10125 IPR002559 Transposase, IS4-like CFM90_10125 IPR024473 Transposase, IS4, N-terminal CFM90_10130 IPR007479 ISC system FeS cluster assembly, IscX CFM90_10130 IPR036762 IscX-like superfamily CFM90_10135 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria CFM90_10135 IPR012675 Beta-grasp domain superfamily CFM90_10135 IPR018298 Adrenodoxin, iron-sulphur binding site CFM90_10135 IPR001055 Adrenodoxin CFM90_10135 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_10135 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_10140 IPR010236 ISC system FeS cluster assembly, HscA chaperone CFM90_10140 IPR042039 HscA chaperone, nucleotide-binding domain CFM90_10140 IPR018181 Heat shock protein 70, conserved site CFM90_10140 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CFM90_10140 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CFM90_10140 IPR013126 Heat shock protein 70 family CFM90_10145 IPR001623 DnaJ domain CFM90_10145 IPR004640 Co-chaperone Hsc20 CFM90_10145 IPR036386 HscB, C-terminal domain superfamily CFM90_10145 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain CFM90_10145 IPR036869 Chaperone J-domain superfamily CFM90_10155 IPR016092 FeS cluster insertion protein CFM90_10155 IPR017870 FeS cluster insertion, C-terminal, conserved site CFM90_10155 IPR035903 HesB-like domain superfamily CFM90_10155 IPR011302 Iron-binding protein IscA, proteobacteria CFM90_10155 IPR000361 FeS cluster biogenesis CFM90_10160 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CFM90_10160 IPR011339 ISC system FeS cluster assembly, IscU scaffold CFM90_10165 IPR016454 Cysteine desulfurase CFM90_10165 IPR010240 Cysteine desulfurase IscS CFM90_10165 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CFM90_10165 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_10165 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_10165 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_10165 IPR000192 Aminotransferase class V domain CFM90_10170 IPR010242 Transcription factor HTH, IscR CFM90_10170 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_10170 IPR000944 Transcription regulator Rrf2-type CFM90_10170 IPR030489 Transcription regulator Rrf2-type, conserved site CFM90_10170 IPR036390 Winged helix DNA-binding domain superfamily CFM90_10175 IPR025997 Periplasmic binding protein CFM90_10175 IPR028082 Periplasmic binding protein-like I CFM90_10180 IPR015861 ABC transporter, ribose import, RbsA CFM90_10180 IPR003593 AAA+ ATPase domain CFM90_10180 IPR003439 ABC transporter-like CFM90_10180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_10180 IPR017871 ABC transporter, conserved site CFM90_10185 IPR001851 ABC transporter, permease CFM90_10190 IPR028082 Periplasmic binding protein-like I CFM90_10190 IPR000843 LacI-type HTH domain CFM90_10190 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_10190 IPR023588 Transcription regulator HTH, PurR CFM90_10195 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CFM90_10195 IPR011611 Carbohydrate kinase PfkB CFM90_10195 IPR002139 Ribokinase/fructokinase CFM90_10195 IPR029056 Ribokinase-like CFM90_10195 IPR011877 Ribokinase CFM90_10205 IPR041471 UvrB, interaction domain CFM90_10205 IPR024759 UvrB, YAD/RRR-motif-containing domain CFM90_10205 IPR004807 UvrABC system, subunit B CFM90_10205 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_10205 IPR006935 Helicase/UvrB, N-terminal CFM90_10205 IPR036876 UVR domain superfamily CFM90_10205 IPR001943 UVR domain CFM90_10205 IPR001650 Helicase, C-terminal CFM90_10205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_10210 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_10210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_10210 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_10210 IPR004839 Aminotransferase, class I/classII CFM90_10210 IPR000796 Aspartate/other aminotransferase CFM90_10210 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CFM90_10220 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CFM90_10220 IPR009057 Homeobox-like domain superfamily CFM90_10220 IPR001647 DNA-binding HTH domain, TetR-type CFM90_10220 IPR041474 HTH-type transcriptional repressor NicS, C-terminal CFM90_10225 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB CFM90_10225 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_10225 IPR007202 4Fe-4S domain CFM90_10225 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_10225 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria CFM90_10230 IPR005759 Endonuclease III CFM90_10230 IPR003265 HhH-GPD domain CFM90_10230 IPR004035 Endonuclease III, iron-sulphur binding site CFM90_10230 IPR011257 DNA glycosylase CFM90_10230 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CFM90_10230 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CFM90_10230 IPR004036 Endonuclease III-like, conserved site-2 CFM90_10230 IPR000445 Helix-hairpin-helix motif CFM90_10235 IPR029479 Nitroreductase CFM90_10235 IPR000415 Nitroreductase-like CFM90_10235 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE CFM90_10255 IPR008168 Cytochrome c, class IC CFM90_10255 IPR024167 Cytochrome c4-like CFM90_10255 IPR009056 Cytochrome c-like domain CFM90_10255 IPR036909 Cytochrome c-like domain superfamily CFM90_10260 IPR008168 Cytochrome c, class IC CFM90_10260 IPR009056 Cytochrome c-like domain CFM90_10260 IPR036909 Cytochrome c-like domain superfamily CFM90_10265 IPR037219 Peptidase M41-like CFM90_10265 IPR003959 ATPase, AAA-type, core CFM90_10265 IPR005936 Peptidase, FtsH CFM90_10265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_10265 IPR000642 Peptidase M41 CFM90_10265 IPR041569 AAA ATPase, AAA+ lid domain CFM90_10265 IPR003593 AAA+ ATPase domain CFM90_10305 IPR019805 Heat shock protein Hsp90, conserved site CFM90_10305 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_10305 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_10305 IPR001404 Heat shock protein Hsp90 family CFM90_10305 IPR020575 Heat shock protein Hsp90, N-terminal CFM90_10305 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_10305 IPR037196 HSP90, C-terminal domain CFM90_10310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_10310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_10310 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_10310 IPR004839 Aminotransferase, class I/classII CFM90_10315 IPR002318 Alanine-tRNA ligase, class IIc CFM90_10315 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_10315 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CFM90_10315 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CFM90_10315 IPR003156 DHHA1 domain CFM90_10315 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CFM90_10315 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CFM90_10315 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CFM90_10315 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CFM90_10330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_10330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_10330 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_10330 IPR004839 Aminotransferase, class I/classII CFM90_10335 IPR004046 Glutathione S-transferase, C-terminal CFM90_10335 IPR004045 Glutathione S-transferase, N-terminal CFM90_10335 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_10335 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_10335 IPR036249 Thioredoxin-like superfamily CFM90_10350 IPR003804 L-lactate permease CFM90_10365 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CFM90_10365 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CFM90_10365 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CFM90_10365 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CFM90_10365 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CFM90_10365 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CFM90_10370 IPR000189 Prokaryotic transglycosylase, active site CFM90_10370 IPR008258 Transglycosylase SLT domain 1 CFM90_10370 IPR023346 Lysozyme-like domain superfamily CFM90_10375 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_10375 IPR001241 DNA topoisomerase, type IIA CFM90_10375 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_10375 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CFM90_10375 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_10375 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_10375 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CFM90_10375 IPR018522 DNA topoisomerase, type IIA, conserved site CFM90_10375 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CFM90_10375 IPR006171 TOPRIM domain CFM90_10375 IPR002288 DNA gyrase B subunit, C-terminal CFM90_10375 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CFM90_10390 IPR037298 Cyclohexadienyl dehydratase pheC CFM90_10390 IPR018313 Solute-binding protein family 3, conserved site CFM90_10390 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_10420 IPR011545 DEAD/DEAH box helicase domain CFM90_10420 IPR028622 ATP-dependent RNA helicase RhlE CFM90_10420 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_10420 IPR001650 Helicase, C-terminal CFM90_10420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_10420 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CFM90_10420 IPR014014 RNA helicase, DEAD-box type, Q motif CFM90_10425 IPR017806 Ergothioneine biosynthesis protein EgtB CFM90_10425 IPR034660 DinB/YfiT-like putative metalloenzymes CFM90_10425 IPR024775 DinB-like domain CFM90_10425 IPR032890 Hercynine oxygenase, Actinobacteria CFM90_10425 IPR042095 Sulfatase-modifying factor enzyme superfamily CFM90_10425 IPR005532 Sulfatase-modifying factor enzyme CFM90_10425 IPR016187 C-type lectin fold CFM90_10430 IPR035094 Histidine N-alpha-methyltransferase CFM90_10430 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type CFM90_10430 IPR019257 Histidine-specific methyltransferase, SAM-dependent CFM90_10430 IPR017804 Methyltransferase EgtD-like CFM90_10430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_10435 IPR022301 Integral membrane protein YjbE CFM90_10435 IPR005496 Integral membrane protein TerC CFM90_10440 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_10440 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_10440 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CFM90_10445 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CFM90_10445 IPR020940 Thymidylate synthase, active site CFM90_10445 IPR000398 Thymidylate synthase CFM90_10445 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CFM90_10450 IPR012259 Dihydrofolate reductase CFM90_10450 IPR024072 Dihydrofolate reductase-like domain superfamily CFM90_10450 IPR017925 Dihydrofolate reductase conserved site CFM90_10450 IPR001796 Dihydrofolate reductase domain CFM90_10455 IPR002510 Metalloprotease TldD/PmbA CFM90_10455 IPR035068 Metalloprotease TldD/PmbA, N-terminal CFM90_10455 IPR036059 Metalloprotease TldD/PmbA superfamily CFM90_10460 IPR023153 PSPTO4464-like domain superfamily CFM90_10460 IPR006839 Ribosome-associated, YjgA CFM90_10465 IPR036425 MoaB/Mog-like domain superfamily CFM90_10465 IPR008284 Molybdenum cofactor biosynthesis, conserved site CFM90_10465 IPR001453 MoaB/Mog domain CFM90_10470 IPR022894 Oligoribonuclease CFM90_10470 IPR013520 Exonuclease, RNase T/DNA polymerase III CFM90_10470 IPR012337 Ribonuclease H-like superfamily CFM90_10470 IPR036397 Ribonuclease H superfamily CFM90_10475 IPR001915 Peptidase M48 CFM90_10475 IPR022919 Peptidase M48, protease HtpX, putative CFM90_10480 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal CFM90_10480 IPR010914 RsgA GTPase domain CFM90_10480 IPR004881 Ribosome biogenesis GTPase RsgA CFM90_10480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_10480 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CFM90_10480 IPR012340 Nucleic acid-binding, OB-fold CFM90_10490 IPR031347 Protein AmpE CFM90_10490 IPR004485 Cobalamin biosynthesis CobD/CbiB CFM90_10495 IPR015797 NUDIX hydrolase-like domain superfamily CFM90_10495 IPR000086 NUDIX hydrolase domain CFM90_10495 IPR000059 NUDIX hydrolase, NudL, conserved site CFM90_10495 IPR023735 Uncharacterised nudix hydrolase NudL CFM90_10500 IPR018257 Ribosomal protein L19, conserved site CFM90_10500 IPR038657 Ribosomal protein L19 superfamily CFM90_10500 IPR001857 Ribosomal protein L19 CFM90_10500 IPR008991 Translation protein SH3-like domain superfamily CFM90_10505 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CFM90_10505 IPR029028 Alpha/beta knot methyltransferases CFM90_10505 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CFM90_10505 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CFM90_10505 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFM90_10510 IPR011961 16S rRNA processing protein RimM CFM90_10510 IPR027275 PRC-barrel domain CFM90_10510 IPR011033 PRC-barrel-like superfamily CFM90_10510 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_10510 IPR002676 RimM, N-terminal CFM90_10510 IPR036976 RimM, N-terminal domain superfamily CFM90_10515 IPR023803 Ribosomal protein S16 domain superfamily CFM90_10515 IPR000307 Ribosomal protein S16 CFM90_10520 IPR011042 Six-bladed beta-propeller, TolB-like CFM90_10520 IPR012938 Glucose/Sorbosone dehydrogenase CFM90_10520 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CFM90_10540 IPR006638 Elp3/MiaB/NifB CFM90_10540 IPR040086 Protein MJ0683-like CFM90_10540 IPR007197 Radical SAM CFM90_10540 IPR013785 Aldolase-type TIM barrel CFM90_10545 IPR036390 Winged helix DNA-binding domain superfamily CFM90_10545 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_10545 IPR000485 AsnC-type HTH domain CFM90_10545 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_10545 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_10545 IPR019888 Transcription regulator AsnC-type CFM90_10545 IPR011008 Dimeric alpha-beta barrel CFM90_10545 IPR011991 ArsR-like helix-turn-helix domain CFM90_10550 IPR023080 D-amino acid dehydrogenase DadA CFM90_10550 IPR006076 FAD dependent oxidoreductase CFM90_10550 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_10555 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CFM90_10555 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_10555 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_10555 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_10555 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_10555 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_10555 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_10560 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CFM90_10560 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CFM90_10560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_10560 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CFM90_10560 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CFM90_10560 IPR029035 DHS-like NAD/FAD-binding domain superfamily CFM90_10560 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CFM90_10565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_10565 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CFM90_10565 IPR012255 Electron transfer flavoprotein, beta subunit CFM90_10565 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CFM90_10565 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CFM90_10570 IPR004872 Lipoprotein NlpA family CFM90_10575 IPR035906 MetI-like superfamily CFM90_10575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_10580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_10580 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CFM90_10580 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CFM90_10580 IPR017871 ABC transporter, conserved site CFM90_10580 IPR026253 Methionine import ATP-binding protein MetN CFM90_10580 IPR003439 ABC transporter-like CFM90_10580 IPR018449 NIL domain CFM90_10580 IPR003593 AAA+ ATPase domain CFM90_10585 IPR023696 Ureohydrolase domain superfamily CFM90_10585 IPR037138 Histone deacetylase domain superfamily CFM90_10585 IPR023801 Histone deacetylase domain CFM90_10585 IPR000286 Histone deacetylase family CFM90_10590 IPR023346 Lysozyme-like domain superfamily CFM90_10590 IPR011757 Lytic transglycosylase MltB CFM90_10590 IPR031304 Transglycosylase SLT domain 2 CFM90_10595 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_10595 IPR005858 Cysteine synthase CysM CFM90_10595 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CFM90_10595 IPR005856 Cysteine synthase CFM90_10595 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_10605 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CFM90_10605 IPR001509 NAD-dependent epimerase/dehydratase CFM90_10605 IPR036291 NAD(P)-binding domain superfamily CFM90_10610 IPR011913 RfaE bifunctional protein, domain I CFM90_10610 IPR011611 Carbohydrate kinase PfkB CFM90_10610 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CFM90_10610 IPR029056 Ribokinase-like CFM90_10615 IPR036291 NAD(P)-binding domain superfamily CFM90_10615 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_10615 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CFM90_10615 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CFM90_10615 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CFM90_10615 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CFM90_10615 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CFM90_10615 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CFM90_10620 IPR019734 Tetratricopeptide repeat CFM90_10620 IPR013026 Tetratricopeptide repeat-containing domain CFM90_10620 IPR011990 Tetratricopeptide-like helical domain superfamily CFM90_10620 IPR041166 LapB, rubredoxin metal binding domain CFM90_10620 IPR030865 Lipopolysaccharide assembly protein B CFM90_10630 IPR005685 Integration host factor, beta subunit CFM90_10630 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CFM90_10630 IPR000119 Histone-like DNA-binding protein CFM90_10635 IPR003029 S1 domain CFM90_10635 IPR022967 RNA-binding domain, S1 CFM90_10635 IPR012340 Nucleic acid-binding, OB-fold CFM90_10635 IPR000110 Ribosomal protein S1 CFM90_10640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_10640 IPR011994 Cytidylate kinase domain CFM90_10640 IPR003136 Cytidylate kinase CFM90_10645 IPR036968 Enolpyruvate transferase domain superfamily CFM90_10645 IPR001986 Enolpyruvate transferase domain CFM90_10645 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CFM90_10645 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CFM90_10645 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CFM90_10650 IPR036291 NAD(P)-binding domain superfamily CFM90_10650 IPR002912 ACT domain CFM90_10650 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_10650 IPR003099 Prephenate dehydrogenase CFM90_10655 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_10655 IPR004839 Aminotransferase, class I/classII CFM90_10655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_10655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_10655 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CFM90_10655 IPR005861 Histidinol-phosphate aminotransferase family CFM90_10660 IPR036979 Chorismate mutase domain superfamily CFM90_10660 IPR002912 ACT domain CFM90_10660 IPR036263 Chorismate mutase type II superfamily CFM90_10660 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CFM90_10660 IPR001086 Prephenate dehydratase CFM90_10660 IPR018528 Prephenate dehydratase, conserved site CFM90_10660 IPR002701 Chorismate mutase II, prokaryotic-type CFM90_10665 IPR000192 Aminotransferase class V domain CFM90_10665 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_10665 IPR022278 Phosphoserine aminotransferase CFM90_10665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_10665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_10675 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CFM90_10675 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CFM90_10675 IPR005743 DNA gyrase, subunit A CFM90_10675 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CFM90_10675 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CFM90_10675 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CFM90_10675 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CFM90_10680 IPR006690 Outer membrane protein, OmpA-like, conserved site CFM90_10680 IPR006665 OmpA-like domain CFM90_10680 IPR036737 OmpA-like domain superfamily CFM90_10680 IPR006664 Outer membrane protein, bacterial CFM90_10690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_10690 IPR010233 Ubiquinone biosynthesis O-methyltransferase CFM90_10695 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CFM90_10695 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CFM90_10695 IPR023214 HAD superfamily CFM90_10695 IPR036412 HAD-like superfamily CFM90_10695 IPR041492 Haloacid dehalogenase-like hydrolase CFM90_10695 IPR006439 HAD hydrolase, subfamily IA CFM90_10715 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CFM90_10715 IPR006119 Resolvase, N-terminal catalytic domain CFM90_10715 IPR006118 Recombinase, conserved site CFM90_10715 IPR006120 Resolvase, HTH domain CFM90_10775 IPR006531 Gp5 N-terminal CFM90_10775 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CFM90_10775 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CFM90_10775 IPR037026 Vgr protein, OB-fold domain superfamily CFM90_10780 IPR000847 Transcription regulator HTH, LysR CFM90_10780 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_10780 IPR036390 Winged helix DNA-binding domain superfamily CFM90_10780 IPR005119 LysR, substrate-binding CFM90_10785 IPR011701 Major facilitator superfamily CFM90_10785 IPR004736 MFS transporter, metabolite:H symporter CFM90_10785 IPR020846 Major facilitator superfamily domain CFM90_10785 IPR036259 MFS transporter superfamily CFM90_10785 IPR005829 Sugar transporter, conserved site CFM90_10800 IPR001387 Cro/C1-type helix-turn-helix domain CFM90_10800 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_10875 IPR001207 Transposase, mutator type CFM90_10885 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CFM90_10885 IPR018117 DNA methylase, C-5 cytosine-specific, active site CFM90_10885 IPR001525 C-5 cytosine methyltransferase CFM90_10885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_10895 IPR027444 Histone-like protein H-NS, C-terminal domain CFM90_10895 IPR001801 Histone-like protein H-NS CFM90_11015 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFM90_11015 IPR002941 DNA methylase N-4/N-6 CFM90_11015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_11015 IPR001091 Restriction/modification DNA-methylase CFM90_11015 IPR040843 Restriction enzyme adenine methylase associated CFM90_11020 IPR002941 DNA methylase N-4/N-6 CFM90_11020 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site CFM90_11020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_11020 IPR001091 Restriction/modification DNA-methylase CFM90_11155 IPR006118 Recombinase, conserved site CFM90_11155 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CFM90_11155 IPR006120 Resolvase, HTH domain CFM90_11155 IPR006119 Resolvase, N-terminal catalytic domain CFM90_11175 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CFM90_11175 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CFM90_11175 IPR027304 Trigger factor/SurA domain superfamily CFM90_11180 IPR027282 Two partner secretion pathway transporter CFM90_11180 IPR005565 Haemolysin activator HlyB, C-terminal CFM90_11180 IPR035251 ShlB, POTRA domain CFM90_11180 IPR013686 Polypeptide-transport-associated, ShlB-type CFM90_11180 IPR034746 POTRA domain CFM90_11185 IPR011050 Pectin lyase fold/virulence factor CFM90_11185 IPR008619 Filamentous haemagglutinin repeat CFM90_11185 IPR024973 ESPR domain CFM90_11185 IPR008638 Filamentous haemagglutinin, N-terminal CFM90_11185 IPR025157 Hemagglutinin repeat CFM90_11185 IPR012334 Pectin lyase fold CFM90_11260 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_11260 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_11260 IPR036291 NAD(P)-binding domain superfamily CFM90_11280 IPR001036 Acriflavin resistance protein CFM90_11280 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_11280 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CFM90_11290 IPR001647 DNA-binding HTH domain, TetR-type CFM90_11290 IPR009057 Homeobox-like domain superfamily CFM90_11295 IPR003423 Outer membrane efflux protein CFM90_11295 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_11300 IPR036291 NAD(P)-binding domain superfamily CFM90_11300 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_11305 IPR036259 MFS transporter superfamily CFM90_11305 IPR020846 Major facilitator superfamily domain CFM90_11305 IPR011701 Major facilitator superfamily CFM90_11305 IPR004638 Drug resistance transporter EmrB-like CFM90_11315 IPR008490 Transposase InsH, N-terminal CFM90_11315 IPR002559 Transposase, IS4-like CFM90_11375 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CFM90_11375 IPR003346 Transposase, IS116/IS110/IS902 CFM90_11380 IPR009057 Homeobox-like domain superfamily CFM90_11380 IPR002514 Transposase IS3/IS911family CFM90_11465 IPR001647 DNA-binding HTH domain, TetR-type CFM90_11465 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CFM90_11465 IPR009057 Homeobox-like domain superfamily CFM90_11470 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_11470 IPR036291 NAD(P)-binding domain superfamily CFM90_11470 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_11475 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_11475 IPR020843 Polyketide synthase, enoylreductase domain CFM90_11475 IPR036291 NAD(P)-binding domain superfamily CFM90_11475 IPR011032 GroES-like superfamily CFM90_11475 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_11490 IPR005083 Serine/Threonine acetyltransferase, YopJ CFM90_11505 IPR008490 Transposase InsH, N-terminal CFM90_11505 IPR002559 Transposase, IS4-like CFM90_11520 IPR006120 Resolvase, HTH domain CFM90_11520 IPR006118 Recombinase, conserved site CFM90_11520 IPR006119 Resolvase, N-terminal catalytic domain CFM90_11520 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CFM90_11540 IPR035251 ShlB, POTRA domain CFM90_11540 IPR005565 Haemolysin activator HlyB, C-terminal CFM90_11540 IPR013686 Polypeptide-transport-associated, ShlB-type CFM90_11540 IPR034746 POTRA domain CFM90_11540 IPR027282 Two partner secretion pathway transporter CFM90_11550 IPR011050 Pectin lyase fold/virulence factor CFM90_11550 IPR025157 Hemagglutinin repeat CFM90_11550 IPR008638 Filamentous haemagglutinin, N-terminal CFM90_11550 IPR008619 Filamentous haemagglutinin repeat CFM90_11550 IPR024973 ESPR domain CFM90_11550 IPR040559 tRNA nuclease CdiA, C-terminal CFM90_11550 IPR033806 CDI toxin, Bp1026b-like CFM90_11550 IPR012334 Pectin lyase fold CFM90_11615 IPR029060 PIN-like domain superfamily CFM90_11615 IPR002716 PIN domain CFM90_11615 IPR022907 VapC family CFM90_11625 IPR001801 Histone-like protein H-NS CFM90_11625 IPR027444 Histone-like protein H-NS, C-terminal domain CFM90_11750 IPR000415 Nitroreductase-like CFM90_11750 IPR029479 Nitroreductase CFM90_11765 IPR036908 RlpA-like domain superfamily CFM90_11765 IPR009009 RlpA-like protein, double-psi beta-barrel domain CFM90_11765 IPR036749 Expansin, cellulose-binding-like domain superfamily CFM90_11775 IPR036249 Thioredoxin-like superfamily CFM90_11775 IPR004046 Glutathione S-transferase, C-terminal CFM90_11775 IPR004045 Glutathione S-transferase, N-terminal CFM90_11775 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_11775 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_11790 IPR001123 Amino acid exporter protein, LeuE-type CFM90_11790 IPR004778 Homoserine/Threonine efflux protein CFM90_11805 IPR001455 TusA-like domain CFM90_11805 IPR036868 TusA-like domain superfamily CFM90_11810 IPR020084 NUDIX hydrolase, conserved site CFM90_11810 IPR015797 NUDIX hydrolase-like domain superfamily CFM90_11810 IPR020476 NUDIX hydrolase CFM90_11810 IPR023214 HAD superfamily CFM90_11810 IPR006357 HAD-superfamily hydrolase, subfamily IIA CFM90_11810 IPR036412 HAD-like superfamily CFM90_11810 IPR000086 NUDIX hydrolase domain CFM90_11815 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_11815 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_11815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_11815 IPR026273 Low specificity L-threonine aldolase CFM90_11815 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CFM90_11820 IPR004370 4-oxalocrotonate tautomerase CFM90_11820 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CFM90_11820 IPR014347 Tautomerase/MIF superfamily CFM90_11825 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CFM90_11825 IPR001303 Class II aldolase/adducin N-terminal CFM90_11830 IPR010645 Uncharacterised MFS-type transporter YbfB CFM90_11830 IPR036259 MFS transporter superfamily CFM90_11835 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_11835 IPR005119 LysR, substrate-binding CFM90_11835 IPR000847 Transcription regulator HTH, LysR CFM90_11835 IPR036390 Winged helix DNA-binding domain superfamily CFM90_11845 IPR018080 Band 7/stomatin-like, conserved site CFM90_11845 IPR036013 Band 7/SPFH domain superfamily CFM90_11845 IPR001107 Band 7 domain CFM90_11845 IPR001972 Stomatin family CFM90_11855 IPR037066 TonB-dependent receptor, plug domain superfamily CFM90_11855 IPR010105 TonB-dependent siderophore receptor CFM90_11855 IPR000531 TonB-dependent receptor-like, beta-barrel CFM90_11855 IPR010917 TonB-dependent receptor, conserved site CFM90_11855 IPR039423 TonB-dependent receptor-like CFM90_11855 IPR012910 TonB-dependent receptor, plug domain CFM90_11855 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFM90_11855 IPR010916 TonB box, conserved site CFM90_11855 IPR030149 TonB-dependent siderophore receptor FcuA/FatA CFM90_11870 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CFM90_11870 IPR002318 Alanine-tRNA ligase, class IIc CFM90_11870 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CFM90_11870 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CFM90_11870 IPR003156 DHHA1 domain CFM90_11870 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CFM90_11870 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_11870 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CFM90_11870 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CFM90_11875 IPR023606 CoA-transferase family III domain superfamily CFM90_11875 IPR003673 CoA-transferase family III CFM90_11885 IPR009936 Protein of unknown function DUF1468 CFM90_11890 IPR002823 Protein of unknown function DUF112, transmembrane CFM90_11900 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CFM90_11900 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily CFM90_11900 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CFM90_11900 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CFM90_11900 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CFM90_11900 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_11900 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CFM90_11900 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFM90_11900 IPR004514 Glutamine-tRNA synthetase CFM90_11900 IPR022861 Glutamine-tRNA ligase, bacterial CFM90_11930 IPR038590 YaeQ superfamily CFM90_11930 IPR011335 Restriction endonuclease type II-like CFM90_11930 IPR009822 YaeQ CFM90_11935 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CFM90_11945 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily CFM90_11945 IPR013024 Gamma-glutamyl cyclotransferase-like CFM90_11945 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase CFM90_11955 IPR000873 AMP-dependent synthetase/ligase CFM90_11955 IPR042099 AMP-dependent synthetase-like superfamily CFM90_11955 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_11955 IPR020845 AMP-binding, conserved site CFM90_11960 IPR013766 Thioredoxin domain CFM90_11960 IPR005746 Thioredoxin CFM90_11960 IPR036249 Thioredoxin-like superfamily CFM90_11960 IPR017937 Thioredoxin, conserved site CFM90_11970 IPR035938 Hemerythrin-like superfamily CFM90_11970 IPR016131 Haemerythrin, iron-binding site CFM90_11970 IPR012312 Haemerythrin-like CFM90_11970 IPR023504 Bacteriohemerythrin-like protein CFM90_11970 IPR012827 Haemerythrin, metal-binding domain CFM90_11975 IPR019793 Peroxidases heam-ligand binding site CFM90_11975 IPR019794 Peroxidase, active site CFM90_11975 IPR000763 Catalase-peroxidase haem CFM90_11975 IPR002016 Haem peroxidase CFM90_11975 IPR010255 Haem peroxidase superfamily CFM90_11980 IPR000594 THIF-type NAD/FAD binding fold CFM90_11980 IPR035985 Ubiquitin-activating enzyme CFM90_11985 IPR007844 AsmA CFM90_11990 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit CFM90_11990 IPR008168 Cytochrome c, class IC CFM90_11990 IPR036909 Cytochrome c-like domain superfamily CFM90_11990 IPR009056 Cytochrome c-like domain CFM90_11995 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CFM90_11995 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CFM90_11995 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_12005 IPR017853 Glycoside hydrolase superfamily CFM90_12005 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CFM90_12005 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CFM90_12005 IPR019800 Glycoside hydrolase, family 3, active site CFM90_12005 IPR001764 Glycoside hydrolase, family 3, N-terminal CFM90_12010 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CFM90_12010 IPR000659 Pyridoxamine 5'-phosphate oxidase CFM90_12010 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CFM90_12010 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CFM90_12010 IPR012349 FMN-binding split barrel CFM90_12015 IPR003333 Mycolic acid cyclopropane synthase CFM90_12015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_12025 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CFM90_12025 IPR002569 Peptide methionine sulphoxide reductase MsrA CFM90_12030 IPR012349 FMN-binding split barrel CFM90_12030 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_12030 IPR036390 Winged helix DNA-binding domain superfamily CFM90_12030 IPR002563 Flavin reductase like domain CFM90_12040 IPR000485 AsnC-type HTH domain CFM90_12040 IPR011008 Dimeric alpha-beta barrel CFM90_12040 IPR019888 Transcription regulator AsnC-type CFM90_12040 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_12040 IPR011991 ArsR-like helix-turn-helix domain CFM90_12040 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_12040 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_12040 IPR036390 Winged helix DNA-binding domain superfamily CFM90_12045 IPR007325 Kynurenine formamidase/cyclase-like CFM90_12045 IPR017484 Kynurenine formamidase, bacteria CFM90_12045 IPR037175 Kynurenine formamidase superfamily CFM90_12050 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_12050 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_12050 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_12050 IPR000192 Aminotransferase class V domain CFM90_12050 IPR010111 Kynureninase CFM90_12055 IPR017485 Tryptophan 2,3-dioxygenase, bacterial CFM90_12055 IPR004981 Tryptophan 2,3-dioxygenase CFM90_12055 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like CFM90_12065 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_12065 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_12065 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_12065 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_12065 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_12065 IPR006089 Acyl-CoA dehydrogenase, conserved site CFM90_12065 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_12070 IPR006043 Xanthine/uracil/vitamin C permease CFM90_12075 IPR013766 Thioredoxin domain CFM90_12075 IPR024706 Peroxiredoxin, AhpC-type CFM90_12075 IPR022915 Peroxiredoxin, TDXH subfamily CFM90_12075 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CFM90_12075 IPR036249 Thioredoxin-like superfamily CFM90_12075 IPR019479 Peroxiredoxin, C-terminal CFM90_12080 IPR010279 Inner membrane protein YqjD/ElaB CFM90_12100 IPR003593 AAA+ ATPase domain CFM90_12100 IPR017871 ABC transporter, conserved site CFM90_12100 IPR003439 ABC transporter-like CFM90_12100 IPR005670 Phosphate transport system permease protein 1 CFM90_12100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_12100 IPR015850 ABC transporter, phosphate import, PstB CFM90_12105 IPR005226 UPF0014 family CFM90_12110 IPR015797 NUDIX hydrolase-like domain superfamily CFM90_12110 IPR022927 RNA pyrophosphohydrolase RppH CFM90_12110 IPR000086 NUDIX hydrolase domain CFM90_12110 IPR020476 NUDIX hydrolase CFM90_12110 IPR020084 NUDIX hydrolase, conserved site CFM90_12115 IPR042098 Taurine dioxygenase TauD-like superfamily CFM90_12115 IPR003819 TauD/TfdA-like domain CFM90_12130 IPR013785 Aldolase-type TIM barrel CFM90_12130 IPR006218 DAHP synthetase I/KDSA CFM90_12130 IPR006219 DHAP synthase, class 1 CFM90_12135 IPR007439 Chemotaxis phosphatase, CheZ CFM90_12140 IPR011006 CheY-like superfamily CFM90_12140 IPR001789 Signal transduction response regulator, receiver domain CFM90_12150 IPR002559 Transposase, IS4-like CFM90_12150 IPR024473 Transposase, IS4, N-terminal CFM90_12150 IPR012337 Ribonuclease H-like superfamily CFM90_12160 IPR007272 Sulphur transport domain CFM90_12165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_12165 IPR018317 Queuosine biosynthesis protein QueC CFM90_12175 IPR036737 OmpA-like domain superfamily CFM90_12175 IPR006690 Outer membrane protein, OmpA-like, conserved site CFM90_12175 IPR039001 Peptidoglycan-associated lipoprotein CFM90_12175 IPR006665 OmpA-like domain CFM90_12175 IPR006664 Outer membrane protein, bacterial CFM90_12175 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal CFM90_12180 IPR011042 Six-bladed beta-propeller, TolB-like CFM90_12180 IPR011659 WD40-like Beta Propeller CFM90_12180 IPR014167 Tol-Pal system protein TolB CFM90_12180 IPR007195 TolB, N-terminal CFM90_12180 IPR036752 TolB, N-terminal domain superfamily CFM90_12190 IPR003400 Biopolymer transport protein ExbD/TolR CFM90_12190 IPR014168 Tol-Pal system protein TolR CFM90_12195 IPR014163 Tol-Pal system, TolQ CFM90_12195 IPR002898 MotA/TolQ/ExbB proton channel CFM90_12200 IPR029069 HotDog domain superfamily CFM90_12200 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CFM90_12200 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CFM90_12200 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CFM90_12200 IPR006683 Thioesterase domain CFM90_12205 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_12205 IPR036291 NAD(P)-binding domain superfamily CFM90_12205 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_12210 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_12210 IPR039429 Serine hydroxymethyltransferase-like domain CFM90_12210 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CFM90_12210 IPR001085 Serine hydroxymethyltransferase CFM90_12210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_12210 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_12215 IPR003796 Ribonucleotide reductase regulator NrdR-like CFM90_12215 IPR005144 ATP-cone domain CFM90_12235 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CFM90_12235 IPR008707 PilC beta-propeller domain CFM90_12265 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CFM90_12265 IPR008707 PilC beta-propeller domain CFM90_12280 IPR024072 Dihydrofolate reductase-like domain superfamily CFM90_12280 IPR004794 Riboflavin biosynthesis protein RibD CFM90_12280 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CFM90_12280 IPR016192 APOBEC/CMP deaminase, zinc-binding CFM90_12280 IPR011549 Riboflavin-specific deaminase, C-terminal CFM90_12280 IPR002125 Cytidine and deoxycytidylate deaminase domain CFM90_12280 IPR016193 Cytidine deaminase-like CFM90_12285 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CFM90_12285 IPR017938 Riboflavin synthase-like beta-barrel CFM90_12285 IPR001783 Lumazine-binding protein CFM90_12285 IPR026017 Lumazine-binding domain CFM90_12290 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CFM90_12290 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CFM90_12290 IPR032677 GTP cyclohydrolase II CFM90_12290 IPR036144 RibA-like superfamily CFM90_12295 IPR036467 Lumazine/riboflavin synthase superfamily CFM90_12295 IPR034964 Lumazine synthase CFM90_12295 IPR002180 Lumazine/riboflavin synthase CFM90_12300 IPR006027 NusB/RsmB/TIM44 CFM90_12300 IPR035926 NusB-like superfamily CFM90_12300 IPR011605 NusB antitermination factor CFM90_12305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_12305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_12305 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CFM90_12305 IPR004839 Aminotransferase, class I/classII CFM90_12305 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_12310 IPR023664 Murein transglycosylase-C CFM90_12310 IPR023346 Lysozyme-like domain superfamily CFM90_12310 IPR000189 Prokaryotic transglycosylase, active site CFM90_12310 IPR008258 Transglycosylase SLT domain 1 CFM90_12310 IPR024570 Murein transglycosylase-C, N-terminal CFM90_12315 IPR023677 UbiD decarboxylyase, bacteria CFM90_12315 IPR002830 UbiD decarboxylyase family CFM90_12345 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CFM90_12345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_12350 IPR013785 Aldolase-type TIM barrel CFM90_12350 IPR023663 NADPH dehydrogenase CFM90_12350 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CFM90_12355 IPR003824 Undecaprenyl-diphosphatase UppP CFM90_12365 IPR005358 Putative zinc- or iron-chelating domain containing protein CFM90_12375 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CFM90_12375 IPR009057 Homeobox-like domain superfamily CFM90_12375 IPR013572 Transcription regulator MAATS, C-terminal CFM90_12375 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CFM90_12375 IPR001647 DNA-binding HTH domain, TetR-type CFM90_12380 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CFM90_12380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_12385 IPR036873 Rhodanese-like domain superfamily CFM90_12385 IPR001763 Rhodanese-like domain CFM90_12385 IPR001455 TusA-like domain CFM90_12385 IPR036868 TusA-like domain superfamily CFM90_12400 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily CFM90_12400 IPR039901 3-deoxy-D-manno-octulosonic acid transferase CFM90_12400 IPR001296 Glycosyl transferase, family 1 CFM90_12400 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CFM90_12405 IPR002201 Glycosyl transferase, family 9 CFM90_12405 IPR011908 Lipopolysaccharide heptosyltransferase I CFM90_12410 IPR005843 Alpha-D-phosphohexomutase, C-terminal CFM90_12410 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CFM90_12410 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CFM90_12410 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CFM90_12410 IPR005841 Alpha-D-phosphohexomutase superfamily CFM90_12410 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CFM90_12410 IPR016066 Alpha-D-phosphohexomutase, conserved site CFM90_12410 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CFM90_12420 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CFM90_12420 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CFM90_12420 IPR000715 Glycosyl transferase, family 4 CFM90_12425 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_12445 IPR014710 RmlC-like jelly roll fold CFM90_12445 IPR011051 RmlC-like cupin domain superfamily CFM90_12445 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CFM90_12450 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_12450 IPR005835 Nucleotidyl transferase domain CFM90_12450 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CFM90_12455 IPR029903 RmlD-like substrate binding domain CFM90_12455 IPR005913 dTDP-4-dehydrorhamnose reductase family CFM90_12455 IPR036291 NAD(P)-binding domain superfamily CFM90_12460 IPR005888 dTDP-glucose 4,6-dehydratase CFM90_12460 IPR036291 NAD(P)-binding domain superfamily CFM90_12460 IPR016040 NAD(P)-binding domain CFM90_12465 IPR029052 Metallo-dependent phosphatase-like CFM90_12465 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CFM90_12465 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CFM90_12470 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CFM90_12470 IPR002123 Phospholipid/glycerol acyltransferase CFM90_12475 IPR006680 Amidohydrolase-related CFM90_12475 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFM90_12475 IPR032466 Metal-dependent hydrolase CFM90_12475 IPR004722 Dihydroorotase CFM90_12480 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CFM90_12480 IPR002082 Aspartate carbamoyltransferase CFM90_12480 IPR006130 Aspartate/ornithine carbamoyltransferase CFM90_12480 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CFM90_12480 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CFM90_12485 IPR000836 Phosphoribosyltransferase domain CFM90_12485 IPR029057 Phosphoribosyltransferase-like CFM90_12485 IPR023050 Bifunctional protein PyrR CFM90_12490 IPR005227 Putative pre-16S rRNA nuclease CFM90_12490 IPR012337 Ribonuclease H-like superfamily CFM90_12490 IPR037027 YqgF/RNase H-like domain superfamily CFM90_12490 IPR006641 YqgF/RNase H-like domain CFM90_12495 IPR003774 Protein of unknown function UPF0301 CFM90_12500 IPR006145 Pseudouridine synthase, RsuA/RluA CFM90_12500 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CFM90_12500 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFM90_12500 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CFM90_12500 IPR036986 RNA-binding S4 domain superfamily CFM90_12500 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CFM90_12500 IPR002942 RNA-binding S4 domain CFM90_12510 IPR036641 HPT domain superfamily CFM90_12510 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_12510 IPR005467 Histidine kinase domain CFM90_12510 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_12510 IPR004105 Histidine kinase CheA-like, homodimeric domain CFM90_12510 IPR002545 CheW-like domain CFM90_12510 IPR036061 CheW-like domain superfamily CFM90_12510 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding CFM90_12510 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily CFM90_12510 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CFM90_12510 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CFM90_12510 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_12510 IPR035891 CheY-binding domain of CheA CFM90_12510 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_12515 IPR029095 NarX-like, N-terminal CFM90_12515 IPR003660 HAMP domain CFM90_12515 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_12515 IPR004090 Chemotaxis methyl-accepting receptor CFM90_12525 IPR001789 Signal transduction response regulator, receiver domain CFM90_12525 IPR011006 CheY-like superfamily CFM90_12530 IPR011006 CheY-like superfamily CFM90_12530 IPR001789 Signal transduction response regulator, receiver domain CFM90_12535 IPR024922 Rubredoxin CFM90_12535 IPR018527 Rubredoxin, iron-binding site CFM90_12535 IPR024935 Rubredoxin domain CFM90_12535 IPR024934 Rubredoxin-like domain CFM90_12540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_12540 IPR005814 Aminotransferase class-III CFM90_12540 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_12540 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CFM90_12540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_12545 IPR020624 Schiff base-forming aldolase, conserved site CFM90_12545 IPR020625 Schiff base-forming aldolase, active site CFM90_12545 IPR002220 DapA-like CFM90_12545 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CFM90_12545 IPR013785 Aldolase-type TIM barrel CFM90_12555 IPR007156 LemA CFM90_12555 IPR023353 LemA-like domain superfamily CFM90_12600 IPR014004 Transport-associated and nodulation domain, bacteria CFM90_12600 IPR004846 Type II/III secretion system CFM90_12600 IPR032789 Pilus formation protein, N-terminal CFM90_12600 IPR007055 BON domain CFM90_12600 IPR001775 GspD/PilQ family CFM90_12615 IPR022399 Helicase/secretion neighbourhood ATPase CFM90_12615 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_12615 IPR001482 Type II/IV secretion system protein CFM90_12665 IPR010295 Protein of unknown function DUF898 CFM90_12670 IPR002423 Chaperonin Cpn60/TCP-1 family CFM90_12670 IPR027409 GroEL-like apical domain superfamily CFM90_12670 IPR027413 GroEL-like equatorial domain superfamily CFM90_12670 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CFM90_12670 IPR018370 Chaperonin Cpn60, conserved site CFM90_12670 IPR001844 Chaperonin Cpn60 CFM90_12675 IPR020818 GroES chaperonin family CFM90_12675 IPR037124 GroES chaperonin superfamily CFM90_12675 IPR018369 Chaperonin GroES, conserved site CFM90_12675 IPR011032 GroES-like superfamily CFM90_12685 IPR013126 Heat shock protein 70 family CFM90_12685 IPR018181 Heat shock protein 70, conserved site CFM90_12685 IPR042054 YegD-like CFM90_12690 IPR011032 GroES-like superfamily CFM90_12690 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_12690 IPR036291 NAD(P)-binding domain superfamily CFM90_12690 IPR020843 Polyketide synthase, enoylreductase domain CFM90_12690 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_12695 IPR041347 MftR, C-terminal CFM90_12695 IPR023851 Transcriptional regulator, TetR-type CFM90_12695 IPR001647 DNA-binding HTH domain, TetR-type CFM90_12695 IPR009057 Homeobox-like domain superfamily CFM90_12700 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_12700 IPR000792 Transcription regulator LuxR, C-terminal CFM90_12700 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_12710 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CFM90_12710 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CFM90_12710 IPR001650 Helicase, C-terminal CFM90_12710 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_12710 IPR028619 ATP-dependent RNA helicase DbpA CFM90_12710 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CFM90_12710 IPR014014 RNA helicase, DEAD-box type, Q motif CFM90_12710 IPR011545 DEAD/DEAH box helicase domain CFM90_12710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_12715 IPR036390 Winged helix DNA-binding domain superfamily CFM90_12715 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_12715 IPR000847 Transcription regulator HTH, LysR CFM90_12715 IPR005119 LysR, substrate-binding CFM90_12720 IPR018170 Aldo/keto reductase, conserved site CFM90_12720 IPR023210 NADP-dependent oxidoreductase domain CFM90_12720 IPR036812 NADP-dependent oxidoreductase domain superfamily CFM90_12720 IPR020471 Aldo/keto reductase CFM90_12725 IPR036259 MFS transporter superfamily CFM90_12725 IPR020846 Major facilitator superfamily domain CFM90_12725 IPR011701 Major facilitator superfamily CFM90_12740 IPR022742 Serine aminopeptidase, S33 CFM90_12740 IPR029058 Alpha/Beta hydrolase fold CFM90_12745 IPR007476 Putative exonuclease, RdgC CFM90_12765 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_12765 IPR000847 Transcription regulator HTH, LysR CFM90_12765 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain CFM90_12765 IPR036390 Winged helix DNA-binding domain superfamily CFM90_12765 IPR005119 LysR, substrate-binding CFM90_12770 IPR000620 EamA domain CFM90_12805 IPR004045 Glutathione S-transferase, N-terminal CFM90_12805 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_12805 IPR040079 Glutathione Transferase family CFM90_12805 IPR005955 Glutathione S-transferases, class Zeta CFM90_12805 IPR034330 Glutathione S-transferases, class Zeta , C-terminal CFM90_12805 IPR034333 Glutathione S-transferases, class Zeta , N-terminal CFM90_12805 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_12805 IPR036249 Thioredoxin-like superfamily CFM90_12810 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_12810 IPR004090 Chemotaxis methyl-accepting receptor CFM90_12810 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_12810 IPR003660 HAMP domain CFM90_12810 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_12810 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_12815 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_12815 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CFM90_12815 IPR036291 NAD(P)-binding domain superfamily CFM90_12815 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_12815 IPR011032 GroES-like superfamily CFM90_12815 IPR014183 Alcohol dehydrogenase class III CFM90_12820 IPR014186 S-formylglutathione hydrolase CFM90_12820 IPR000801 Putative esterase CFM90_12820 IPR029058 Alpha/Beta hydrolase fold CFM90_12835 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type CFM90_12835 IPR007498 Intermembrane transport protein PqiA-like CFM90_12840 IPR003399 Mce/MlaD CFM90_12850 IPR036390 Winged helix DNA-binding domain superfamily CFM90_12850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_12850 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_12850 IPR004839 Aminotransferase, class I/classII CFM90_12850 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_12850 IPR000524 Transcription regulator HTH, GntR CFM90_12850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_12885 IPR021812 Protein of unknown function DUF3391 CFM90_12885 IPR006674 HD domain CFM90_12885 IPR006675 HDIG domain CFM90_12885 IPR037522 HD-GYP domain CFM90_12885 IPR003607 HD/PDEase domain CFM90_12900 IPR023631 Amidase signature domain CFM90_12900 IPR000120 Amidase CFM90_12900 IPR036928 Amidase signature (AS) superfamily CFM90_12905 IPR001633 EAL domain CFM90_12905 IPR029787 Nucleotide cyclase CFM90_12905 IPR005330 MHYT domain CFM90_12905 IPR000160 GGDEF domain CFM90_12905 IPR035919 EAL domain superfamily CFM90_12920 IPR036259 MFS transporter superfamily CFM90_12920 IPR011701 Major facilitator superfamily CFM90_12920 IPR020846 Major facilitator superfamily domain CFM90_12925 IPR012338 Beta-lactamase/transpeptidase-like CFM90_12925 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C CFM90_12930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_12930 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CFM90_12940 IPR036412 HAD-like superfamily CFM90_12940 IPR006439 HAD hydrolase, subfamily IA CFM90_12940 IPR041492 Haloacid dehalogenase-like hydrolase CFM90_12940 IPR023214 HAD superfamily CFM90_12940 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CFM90_12940 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CFM90_12940 IPR037512 Phosphoglycolate phosphatase, prokaryotic CFM90_12950 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CFM90_12950 IPR005145 Putative GTP-binding controlling metal-binding domain CFM90_12950 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CFM90_12950 IPR006070 YrdC-like domain CFM90_12950 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily CFM90_12955 IPR016185 Pre-ATP-grasp domain superfamily CFM90_12955 IPR011761 ATP-grasp fold CFM90_12955 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CFM90_12955 IPR013815 ATP-grasp fold, subdomain 1 CFM90_12955 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CFM90_12955 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain CFM90_12955 IPR011054 Rudiment single hybrid motif CFM90_12960 IPR035893 PurE domain superfamily CFM90_12960 IPR024694 PurE, prokaryotic type CFM90_12960 IPR000031 PurE domain CFM90_12960 IPR033747 Class I PurE CFM90_12965 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CFM90_12965 IPR018236 SAICAR synthetase, conserved site CFM90_12965 IPR028923 SAICAR synthetase/ADE2, N-terminal CFM90_12970 IPR000771 Fructose-bisphosphate aldolase, class-II CFM90_12970 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype CFM90_12970 IPR013785 Aldolase-type TIM barrel CFM90_12975 IPR015793 Pyruvate kinase, barrel CFM90_12975 IPR036918 Pyruvate kinase, C-terminal domain superfamily CFM90_12975 IPR040442 Pyruvate kinase-like domain superfamily CFM90_12975 IPR015795 Pyruvate kinase, C-terminal CFM90_12975 IPR011037 Pyruvate kinase-like, insert domain superfamily CFM90_12975 IPR018209 Pyruvate kinase, active site CFM90_12975 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_12975 IPR001697 Pyruvate kinase CFM90_12975 IPR015806 Pyruvate kinase, insert domain superfamily CFM90_12980 IPR015911 Phosphoglycerate kinase, conserved site CFM90_12980 IPR015824 Phosphoglycerate kinase, N-terminal CFM90_12980 IPR036043 Phosphoglycerate kinase superfamily CFM90_12980 IPR001576 Phosphoglycerate kinase CFM90_12985 IPR000620 EamA domain CFM90_12985 IPR004626 RarD protein CFM90_13000 IPR005785 Branched-chain amino acid aminotransferase I CFM90_13000 IPR033939 Branched-chain aminotransferase CFM90_13000 IPR036038 Aminotransferase-like, PLP-dependent enzymes CFM90_13000 IPR001544 Aminotransferase class IV CFM90_13000 IPR018300 Aminotransferase, class IV, conserved site CFM90_13010 IPR002201 Glycosyl transferase, family 9 CFM90_13010 IPR011910 ADP-heptose--LPS heptosyltransferase 2 CFM90_13020 IPR000952 AB hydrolase 4, conserved site CFM90_13020 IPR029058 Alpha/Beta hydrolase fold CFM90_13020 IPR000073 Alpha/beta hydrolase fold-1 CFM90_13020 IPR012020 AB hydrolase 4 family CFM90_13030 IPR030873 Beta-barrel assembly-enhancing protease CFM90_13030 IPR013026 Tetratricopeptide repeat-containing domain CFM90_13030 IPR011990 Tetratricopeptide-like helical domain superfamily CFM90_13030 IPR001915 Peptidase M48 CFM90_13030 IPR019734 Tetratricopeptide repeat CFM90_13035 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CFM90_13035 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CFM90_13035 IPR023045 Molybdenum cofactor biosynthesis C CFM90_13045 IPR012902 Prokaryotic N-terminal methylation site CFM90_13045 IPR001082 Fimbrial protein pilin CFM90_13055 IPR005496 Integral membrane protein TerC CFM90_13055 IPR022301 Integral membrane protein YjbE CFM90_13060 IPR016102 Succinyl-CoA synthetase-like CFM90_13060 IPR005810 Succinyl-CoA ligase, alpha subunit CFM90_13060 IPR003781 CoA-binding CFM90_13060 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CFM90_13060 IPR036291 NAD(P)-binding domain superfamily CFM90_13060 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CFM90_13060 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CFM90_13065 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CFM90_13065 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CFM90_13065 IPR013815 ATP-grasp fold, subdomain 1 CFM90_13065 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CFM90_13065 IPR011761 ATP-grasp fold CFM90_13065 IPR005809 Succinate--CoA synthetase, beta subunit CFM90_13065 IPR016102 Succinyl-CoA synthetase-like CFM90_13075 IPR003783 Regulatory protein RecX CFM90_13075 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_13080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13080 IPR003593 AAA+ ATPase domain CFM90_13080 IPR023400 DNA recombination and repair protein RecA, C-terminal CFM90_13080 IPR013765 DNA recombination and repair protein RecA CFM90_13080 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CFM90_13080 IPR020584 DNA recombination/repair protein RecA, conserved site CFM90_13080 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CFM90_13085 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_13085 IPR039420 Transcriptional regulatory protein WalR-like CFM90_13085 IPR001789 Signal transduction response regulator, receiver domain CFM90_13085 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_13085 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_13085 IPR011006 CheY-like superfamily CFM90_13090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_13090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_13090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_13090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_13090 IPR013727 Two-component sensor kinase, N-terminal CFM90_13090 IPR003660 HAMP domain CFM90_13090 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_13090 IPR005467 Histidine kinase domain CFM90_13100 IPR015041 Osmosensory transporter coiled coil CFM90_13100 IPR005828 Major facilitator, sugar transporter-like CFM90_13100 IPR020846 Major facilitator superfamily domain CFM90_13100 IPR004736 MFS transporter, metabolite:H symporter CFM90_13100 IPR036292 Proline/betaine transporter ProP, C-terminal CFM90_13100 IPR036259 MFS transporter superfamily CFM90_13100 IPR005829 Sugar transporter, conserved site CFM90_13115 IPR002938 FAD-binding domain CFM90_13115 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_13125 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_13125 IPR001789 Signal transduction response regulator, receiver domain CFM90_13125 IPR039420 Transcriptional regulatory protein WalR-like CFM90_13125 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_13125 IPR011006 CheY-like superfamily CFM90_13130 IPR005119 LysR, substrate-binding CFM90_13130 IPR000847 Transcription regulator HTH, LysR CFM90_13130 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_13130 IPR036390 Winged helix DNA-binding domain superfamily CFM90_13135 IPR012093 Pirin CFM90_13135 IPR011051 RmlC-like cupin domain superfamily CFM90_13135 IPR014710 RmlC-like jelly roll fold CFM90_13135 IPR003829 Pirin, N-terminal domain CFM90_13135 IPR008778 Pirin, C-terminal domain CFM90_13140 IPR011009 Protein kinase-like domain superfamily CFM90_13140 IPR002575 Aminoglycoside phosphotransferase CFM90_13140 IPR032882 SrkA/RdoA protein kinase CFM90_13145 IPR028622 ATP-dependent RNA helicase RhlE CFM90_13145 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CFM90_13145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13145 IPR011545 DEAD/DEAH box helicase domain CFM90_13145 IPR014014 RNA helicase, DEAD-box type, Q motif CFM90_13145 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_13145 IPR001650 Helicase, C-terminal CFM90_13150 IPR002559 Transposase, IS4-like CFM90_13150 IPR008490 Transposase InsH, N-terminal CFM90_13155 IPR001647 DNA-binding HTH domain, TetR-type CFM90_13155 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CFM90_13155 IPR009057 Homeobox-like domain superfamily CFM90_13160 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_13160 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_13160 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_13160 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_13160 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type CFM90_13160 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_13165 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_13165 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_13165 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CFM90_13165 IPR036291 NAD(P)-binding domain superfamily CFM90_13175 IPR042099 AMP-dependent synthetase-like superfamily CFM90_13175 IPR000873 AMP-dependent synthetase/ligase CFM90_13175 IPR020845 AMP-binding, conserved site CFM90_13175 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_13200 IPR020612 Methylthiotransferase, conserved site CFM90_13200 IPR005839 Methylthiotransferase CFM90_13200 IPR013848 Methylthiotransferase, N-terminal CFM90_13200 IPR038135 Methylthiotransferase, N-terminal domain superfamily CFM90_13200 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CFM90_13200 IPR007197 Radical SAM CFM90_13200 IPR023404 Radical SAM, alpha/beta horseshoe CFM90_13200 IPR002792 TRAM domain CFM90_13200 IPR006638 Elp3/MiaB/NifB CFM90_13205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13205 IPR003714 PhoH-like protein CFM90_13210 IPR002036 Endoribonuclease YbeY CFM90_13210 IPR020549 Endoribonuclease YbeY, conserved site CFM90_13210 IPR023091 Metalloprotease catalytic domain superfamily, predicted CFM90_13215 IPR005170 Transporter-associated domain CFM90_13215 IPR016169 FAD-binding, type PCMH, subdomain 2 CFM90_13215 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_13215 IPR000644 CBS domain CFM90_13220 IPR003010 Carbon-nitrogen hydrolase CFM90_13220 IPR036526 Carbon-nitrogen hydrolase superfamily CFM90_13220 IPR004563 Apolipoprotein N-acyltransferase CFM90_13225 IPR006194 Glycine-tRNA synthetase, heterodimeric CFM90_13225 IPR002310 Glycine-tRNA ligase, alpha subunit CFM90_13235 IPR008909 DALR anticodon binding CFM90_13235 IPR015944 Glycine-tRNA ligase, beta subunit CFM90_13235 IPR006194 Glycine-tRNA synthetase, heterodimeric CFM90_13240 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CFM90_13240 IPR036412 HAD-like superfamily CFM90_13240 IPR023214 HAD superfamily CFM90_13240 IPR006543 Histidinol-phosphate phosphatase CFM90_13240 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CFM90_13245 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CFM90_13245 IPR002123 Phospholipid/glycerol acyltransferase CFM90_13255 IPR018146 Glyoxalase I, conserved site CFM90_13255 IPR004361 Glyoxalase I CFM90_13255 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CFM90_13255 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CFM90_13255 IPR037523 Vicinal oxygen chelate (VOC) domain CFM90_13260 IPR000620 EamA domain CFM90_13265 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CFM90_13265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_13265 IPR011530 Ribosomal RNA adenine dimethylase CFM90_13265 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CFM90_13265 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CFM90_13265 IPR023165 rRNA adenine dimethylase-like CFM90_13270 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase CFM90_13270 IPR005255 PdxA family CFM90_13275 IPR015391 SurA N-terminal CFM90_13275 IPR023034 Peptidyl-prolyl isomerase SurA CFM90_13275 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CFM90_13275 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CFM90_13275 IPR027304 Trigger factor/SurA domain superfamily CFM90_13280 IPR020889 LPS-assembly protein LptD CFM90_13280 IPR007543 LptD, C-terminal CFM90_13285 IPR011009 Protein kinase-like domain superfamily CFM90_13285 IPR002575 Aminoglycoside phosphotransferase CFM90_13300 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_13300 IPR005835 Nucleotidyl transferase domain CFM90_13305 IPR005330 MHYT domain CFM90_13305 IPR000160 GGDEF domain CFM90_13305 IPR035919 EAL domain superfamily CFM90_13305 IPR001633 EAL domain CFM90_13305 IPR029787 Nucleotide cyclase CFM90_13310 IPR000994 Peptidase M24 CFM90_13310 IPR036005 Creatinase/aminopeptidase-like CFM90_13310 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CFM90_13310 IPR007865 Aminopeptidase P, N-terminal CFM90_13310 IPR001714 Peptidase M24, methionine aminopeptidase CFM90_13310 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CFM90_13315 IPR002938 FAD-binding domain CFM90_13315 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase CFM90_13315 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CFM90_13315 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CFM90_13315 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_13320 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_13320 IPR006076 FAD dependent oxidoreductase CFM90_13320 IPR023080 D-amino acid dehydrogenase DadA CFM90_13325 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative CFM90_13335 IPR018517 tRNA-dihydrouridine synthase, conserved site CFM90_13335 IPR001269 tRNA-dihydrouridine synthase CFM90_13335 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CFM90_13335 IPR032887 tRNA-dihydrouridine synthase B CFM90_13335 IPR035587 DUS-like, FMN-binding domain CFM90_13335 IPR013785 Aldolase-type TIM barrel CFM90_13335 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CFM90_13340 IPR005412 DNA-binding protein Fis CFM90_13340 IPR002197 DNA binding HTH domain, Fis-type CFM90_13340 IPR009057 Homeobox-like domain superfamily CFM90_13345 IPR036914 Methylglyoxal synthase-like domain superfamily CFM90_13345 IPR011607 Methylglyoxal synthase-like domain CFM90_13345 IPR024051 AICAR transformylase, duplicated domain superfamily CFM90_13345 IPR016193 Cytidine deaminase-like CFM90_13345 IPR002695 Bifunctional purine biosynthesis protein PurH-like CFM90_13355 IPR036397 Ribonuclease H superfamily CFM90_13355 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CFM90_13355 IPR002176 Crossover junction endodeoxyribonuclease RuvC CFM90_13355 IPR012337 Ribonuclease H-like superfamily CFM90_13365 IPR036267 RuvA, C-terminal domain superfamily CFM90_13365 IPR010994 RuvA domain 2-like CFM90_13365 IPR000085 Bacterial DNA recombination protein RuvA CFM90_13365 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CFM90_13365 IPR012340 Nucleic acid-binding, OB-fold CFM90_13365 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CFM90_13365 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CFM90_13370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13370 IPR041445 RuvB, AAA lid domain CFM90_13370 IPR004605 DNA helicase, Holliday junction RuvB-type CFM90_13370 IPR008824 RuvB-like P-loop domain CFM90_13370 IPR008823 RuvB C-terminal winged helix domain CFM90_13370 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_13370 IPR036390 Winged helix DNA-binding domain superfamily CFM90_13370 IPR003593 AAA+ ATPase domain CFM90_13375 IPR023086 Phosphoglycerate mutase, GpmB, probable CFM90_13375 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CFM90_13375 IPR029033 Histidine phosphatase superfamily CFM90_13375 IPR013078 Histidine phosphatase superfamily, clade-1 CFM90_13385 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CFM90_13385 IPR003732 D-aminoacyl-tRNA deacylase DTD CFM90_13390 IPR036986 RNA-binding S4 domain superfamily CFM90_13390 IPR002307 Tyrosine-tRNA ligase CFM90_13390 IPR024088 Tyrosine-tRNA ligase, bacterial-type CFM90_13390 IPR002942 RNA-binding S4 domain CFM90_13390 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CFM90_13390 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFM90_13390 IPR002305 Aminoacyl-tRNA synthetase, class Ic CFM90_13390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_13390 IPR000253 Forkhead-associated (FHA) domain CFM90_13395 IPR005338 Anhydro-N-acetylmuramic acid kinase CFM90_13400 IPR017870 FeS cluster insertion, C-terminal, conserved site CFM90_13400 IPR023063 FeS cluster insertion protein ErpA CFM90_13400 IPR035903 HesB-like domain superfamily CFM90_13400 IPR016092 FeS cluster insertion protein CFM90_13400 IPR000361 FeS cluster biogenesis CFM90_13415 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_13415 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_13415 IPR000754 Ribosomal protein S9 CFM90_13415 IPR020574 Ribosomal protein S9, conserved site CFM90_13415 IPR023035 Ribosomal protein S9, bacterial/plastid CFM90_13420 IPR005823 Ribosomal protein L13, bacterial-type CFM90_13420 IPR005822 Ribosomal protein L13 CFM90_13420 IPR036899 Ribosomal protein L13 superfamily CFM90_13440 IPR032466 Metal-dependent hydrolase CFM90_13440 IPR002195 Dihydroorotase, conserved site CFM90_13440 IPR006680 Amidohydrolase-related CFM90_13440 IPR004721 Dihydroorotase homodimeric type CFM90_13445 IPR037035 Glycerate kinase-like, C-terminal domain superfamily CFM90_13445 IPR025286 MOFRL-associated domain CFM90_13445 IPR039760 MOFRL domain-containing protein CFM90_13445 IPR038614 Glycerate kinase, N-terminal domain superfamily CFM90_13445 IPR007835 MOFRL domain CFM90_13450 IPR011829 Tartrate dehydrogenase CFM90_13450 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CFM90_13450 IPR024084 Isopropylmalate dehydrogenase-like domain CFM90_13455 IPR029055 Nucleophile aminohydrolases, N-terminal CFM90_13455 IPR026869 Putative glutamine amidotransferase type 2 CFM90_13455 IPR017932 Glutamine amidotransferase type 2 domain CFM90_13460 IPR017871 ABC transporter, conserved site CFM90_13460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13460 IPR003439 ABC transporter-like CFM90_13460 IPR003593 AAA+ ATPase domain CFM90_13460 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFM90_13465 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM CFM90_13465 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_13465 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFM90_13465 IPR035906 MetI-like superfamily CFM90_13470 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ CFM90_13470 IPR035906 MetI-like superfamily CFM90_13470 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_13470 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFM90_13475 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_13480 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CFM90_13480 IPR036291 NAD(P)-binding domain superfamily CFM90_13480 IPR014362 Glutamate dehydrogenase CFM90_13480 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CFM90_13480 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CFM90_13480 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CFM90_13480 IPR033524 Leu/Phe/Val dehydrogenases active site CFM90_13490 IPR017871 ABC transporter, conserved site CFM90_13490 IPR003439 ABC transporter-like CFM90_13490 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFM90_13490 IPR011527 ABC transporter type 1, transmembrane domain CFM90_13490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13490 IPR039421 Type I protein exporter CFM90_13490 IPR003593 AAA+ ATPase domain CFM90_13495 IPR006683 Thioesterase domain CFM90_13495 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CFM90_13495 IPR029069 HotDog domain superfamily CFM90_13495 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CFM90_13500 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_13500 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_13500 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CFM90_13500 IPR029045 ClpP/crotonase-like domain superfamily CFM90_13505 IPR020616 Thiolase, N-terminal CFM90_13505 IPR020613 Thiolase, conserved site CFM90_13505 IPR020610 Thiolase, active site CFM90_13505 IPR020617 Thiolase, C-terminal CFM90_13505 IPR016039 Thiolase-like CFM90_13505 IPR020615 Thiolase, acyl-enzyme intermediate active site CFM90_13505 IPR002155 Thiolase CFM90_13510 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CFM90_13510 IPR036291 NAD(P)-binding domain superfamily CFM90_13510 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_13510 IPR029045 ClpP/crotonase-like domain superfamily CFM90_13510 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFM90_13510 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_13510 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CFM90_13515 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CFM90_13515 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_13515 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_13515 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_13515 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_13515 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_13515 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_13525 IPR014388 3-oxoacid CoA-transferase CFM90_13525 IPR004165 Coenzyme A transferase family I CFM90_13525 IPR037171 NagB/RpiA transferase-like CFM90_13530 IPR025202 Phospholipase D-like domain CFM90_13530 IPR030872 Cardiolipin synthase B CFM90_13530 IPR001736 Phospholipase D/Transphosphatidylase CFM90_13535 IPR005135 Endonuclease/exonuclease/phosphatase CFM90_13535 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CFM90_13540 IPR015797 NUDIX hydrolase-like domain superfamily CFM90_13540 IPR020084 NUDIX hydrolase, conserved site CFM90_13540 IPR000086 NUDIX hydrolase domain CFM90_13540 IPR003564 Dihydroneopterin triphosphate diphosphatase CFM90_13550 IPR012340 Nucleic acid-binding, OB-fold CFM90_13550 IPR004524 Aspartate-tRNA ligase, type 1 CFM90_13550 IPR006195 Aminoacyl-tRNA synthetase, class II CFM90_13550 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CFM90_13550 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CFM90_13550 IPR029351 GAD domain CFM90_13550 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CFM90_13550 IPR004115 GAD-like domain superfamily CFM90_13570 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification CFM90_13570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_13570 IPR008854 TPMT family CFM90_13570 IPR025835 Thiopurine S-methyltransferase CFM90_13575 IPR000719 Protein kinase domain CFM90_13575 IPR004147 UbiB domain CFM90_13575 IPR011009 Protein kinase-like domain superfamily CFM90_13575 IPR010232 Probable protein kinase UbiB CFM90_13590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_13590 IPR004033 UbiE/COQ5 methyltransferase CFM90_13590 IPR023576 UbiE/COQ5 methyltransferase, conserved site CFM90_13600 IPR011527 ABC transporter type 1, transmembrane domain CFM90_13600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13600 IPR017871 ABC transporter, conserved site CFM90_13600 IPR003593 AAA+ ATPase domain CFM90_13600 IPR003439 ABC transporter-like CFM90_13600 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFM90_13615 IPR032816 SNARE associated Golgi protein CFM90_13620 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CFM90_13630 IPR016449 Potassium channel, inwardly rectifying, Kir CFM90_13630 IPR013099 Potassium channel domain CFM90_13630 IPR014756 Immunoglobulin E-set CFM90_13630 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic CFM90_13630 IPR041647 Inward rectifier potassium channel, C-terminal CFM90_13635 IPR038110 Threonine dehydratase, ACT-like domain superfamily CFM90_13635 IPR005787 Threonine dehydratase, biosynthetic CFM90_13635 IPR001721 Threonine dehydratase, ACT-like domain CFM90_13635 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CFM90_13635 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_13635 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_13640 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CFM90_13640 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CFM90_13640 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CFM90_13670 IPR000873 AMP-dependent synthetase/ligase CFM90_13670 IPR020845 AMP-binding, conserved site CFM90_13670 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_13675 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CFM90_13675 IPR031322 Shikimate kinase/gluconokinase CFM90_13675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13685 IPR029058 Alpha/Beta hydrolase fold CFM90_13685 IPR013094 Alpha/beta hydrolase fold-3 CFM90_13685 IPR033140 Lipase, GDXG, putative serine active site CFM90_13685 IPR002168 Lipase, GDXG, putative histidine active site CFM90_13690 IPR007272 Sulphur transport domain CFM90_13705 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative CFM90_13705 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_13705 IPR036291 NAD(P)-binding domain superfamily CFM90_13720 IPR029069 HotDog domain superfamily CFM90_13720 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CFM90_13720 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CFM90_13745 IPR014031 Beta-ketoacyl synthase, C-terminal CFM90_13745 IPR014030 Beta-ketoacyl synthase, N-terminal CFM90_13745 IPR016039 Thiolase-like CFM90_13745 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFM90_13745 IPR018201 Beta-ketoacyl synthase, active site CFM90_13745 IPR000794 Beta-ketoacyl synthase CFM90_13745 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CFM90_13765 IPR025948 HTH-like domain CFM90_13770 IPR012340 Nucleic acid-binding, OB-fold CFM90_13770 IPR000424 Primosome PriB/single-strand DNA-binding CFM90_13770 IPR011344 Single-stranded DNA-binding protein CFM90_13775 IPR011701 Major facilitator superfamily CFM90_13775 IPR020846 Major facilitator superfamily domain CFM90_13775 IPR036259 MFS transporter superfamily CFM90_13780 IPR041552 UvrA DNA-binding domain CFM90_13780 IPR041102 UvrA, interaction domain CFM90_13780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13780 IPR017871 ABC transporter, conserved site CFM90_13780 IPR003439 ABC transporter-like CFM90_13780 IPR004602 UvrABC system subunit A CFM90_13790 IPR003841 Sodium-dependent phosphate transport protein CFM90_13790 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein CFM90_13795 IPR001123 Amino acid exporter protein, LeuE-type CFM90_13800 IPR029057 Phosphoribosyltransferase-like CFM90_13800 IPR000836 Phosphoribosyltransferase domain CFM90_13800 IPR005764 Adenine phosphoribosyl transferase CFM90_13805 IPR006286 Deglycase PfpI CFM90_13805 IPR002818 DJ-1/PfpI CFM90_13805 IPR029062 Class I glutamine amidotransferase-like CFM90_13815 IPR003148 Regulator of K+ conductance, N-terminal CFM90_13815 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CFM90_13815 IPR006037 Regulator of K+ conductance, C-terminal CFM90_13815 IPR036291 NAD(P)-binding domain superfamily CFM90_13815 IPR006153 Cation/H+ exchanger CFM90_13815 IPR038770 Sodium/solute symporter superfamily CFM90_13825 IPR000644 CBS domain CFM90_13825 IPR001347 Sugar isomerase (SIS) CFM90_13825 IPR035474 KpsF-like, SIS domain CFM90_13825 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CFM90_13830 IPR023214 HAD superfamily CFM90_13830 IPR036412 HAD-like superfamily CFM90_13830 IPR010023 KdsC family CFM90_13845 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CFM90_13845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13845 IPR017871 ABC transporter, conserved site CFM90_13845 IPR003593 AAA+ ATPase domain CFM90_13845 IPR003439 ABC transporter-like CFM90_13845 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFM90_13850 IPR007046 RNA polymerase sigma factor 54, core-binding domain CFM90_13850 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CFM90_13850 IPR007634 RNA polymerase sigma factor 54, DNA-binding CFM90_13850 IPR000394 RNA polymerase sigma factor 54 CFM90_13855 IPR003489 Ribosome hibernation promoting factor/RaiA CFM90_13855 IPR036567 Ribosome hibernation promotion factor-like CFM90_13860 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN CFM90_13860 IPR002178 PTS EIIA type-2 domain CFM90_13860 IPR016152 Phosphotransferase/anion transporter CFM90_13865 IPR003755 HPr(Ser) kinase/phosphorylase CFM90_13865 IPR011104 HPr kinase/phosphorylase, C-terminal CFM90_13865 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal CFM90_13865 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CFM90_13875 IPR005337 RapZ-like family CFM90_13875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13885 IPR004035 Endonuclease III, iron-sulphur binding site CFM90_13885 IPR003265 HhH-GPD domain CFM90_13885 IPR011257 DNA glycosylase CFM90_13885 IPR000445 Helix-hairpin-helix motif CFM90_13885 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CFM90_13885 IPR005760 A/G-specific adenine glycosylase MutY CFM90_13885 IPR015797 NUDIX hydrolase-like domain superfamily CFM90_13885 IPR004036 Endonuclease III-like, conserved site-2 CFM90_13885 IPR029119 MutY, C-terminal CFM90_13885 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CFM90_13895 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CFM90_13895 IPR035937 MutM-like, N-terminal CFM90_13895 IPR020629 Formamidopyrimidine-DNA glycosylase CFM90_13895 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CFM90_13895 IPR010979 Ribosomal protein S13-like, H2TH CFM90_13895 IPR010663 Zinc finger, FPG/IleRS-type CFM90_13895 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CFM90_13895 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CFM90_13905 IPR004565 Outer membrane lipoprotein LolB CFM90_13905 IPR029046 Lipoprotein localisation LolA/LolB/LppX CFM90_13910 IPR013750 GHMP kinase, C-terminal domain CFM90_13910 IPR036554 GHMP kinase, C-terminal domain superfamily CFM90_13910 IPR006204 GHMP kinase N-terminal domain CFM90_13910 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CFM90_13910 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_13910 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_13920 IPR029057 Phosphoribosyltransferase-like CFM90_13920 IPR000836 Phosphoribosyltransferase domain CFM90_13920 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CFM90_13920 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CFM90_13920 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CFM90_13920 IPR005946 Ribose-phosphate pyrophosphokinase CFM90_13925 IPR037121 Ribosomal protein L25, C-terminal CFM90_13925 IPR020057 Ribosomal protein L25, beta domain CFM90_13925 IPR020055 Ribosomal protein L25, short-form CFM90_13925 IPR001021 Ribosomal protein L25, long-form CFM90_13925 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CFM90_13925 IPR029751 Ribosomal protein L25 CFM90_13925 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CFM90_13930 IPR001328 Peptidyl-tRNA hydrolase CFM90_13930 IPR018171 Peptidyl-tRNA hydrolase, conserved site CFM90_13930 IPR036416 Peptidyl-tRNA hydrolase superfamily CFM90_13940 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_13940 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_13945 IPR001980 Phosphopantetheine adenylyltransferase CFM90_13945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_13945 IPR004821 Cytidyltransferase-like domain CFM90_13950 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFM90_13950 IPR004398 RNA methyltransferase, RsmD CFM90_13950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_13955 IPR007863 Peptidase M16, C-terminal CFM90_13955 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CFM90_13960 IPR011765 Peptidase M16, N-terminal CFM90_13960 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CFM90_13960 IPR007863 Peptidase M16, C-terminal CFM90_13960 IPR001431 Peptidase M16, zinc-binding site CFM90_13965 IPR004390 Signal-recognition particle receptor FtsY CFM90_13965 IPR013822 Signal recognition particle SRP54, helical bundle CFM90_13965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_13965 IPR036225 SRP/SRP receptor, N-terminal CFM90_13965 IPR003593 AAA+ ATPase domain CFM90_13965 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CFM90_13965 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CFM90_13975 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_13975 IPR005955 Glutathione S-transferases, class Zeta CFM90_13975 IPR034330 Glutathione S-transferases, class Zeta , C-terminal CFM90_13975 IPR040079 Glutathione Transferase family CFM90_13975 IPR036249 Thioredoxin-like superfamily CFM90_13975 IPR004046 Glutathione S-transferase, C-terminal CFM90_13975 IPR004045 Glutathione S-transferase, N-terminal CFM90_13975 IPR034333 Glutathione S-transferases, class Zeta , N-terminal CFM90_13975 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_13980 IPR011234 Fumarylacetoacetase-like, C-terminal CFM90_13980 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CFM90_13985 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_13985 IPR011006 CheY-like superfamily CFM90_13985 IPR005561 ANTAR domain CFM90_13985 IPR013587 Nitrate/nitrite sensing protein CFM90_13985 IPR010910 Nitrate/nitrite sensing protein, bacterial CFM90_13995 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_14000 IPR035906 MetI-like superfamily CFM90_14000 IPR005889 Nitrate transport permease CFM90_14000 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_14005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_14005 IPR005890 Nitrate transport ATP-binding subunit C/D CFM90_14005 IPR017871 ABC transporter, conserved site CFM90_14005 IPR003439 ABC transporter-like CFM90_14005 IPR003593 AAA+ ATPase domain CFM90_14010 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CFM90_14010 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CFM90_14010 IPR017459 Glycosyl transferase family 3, N-terminal domain CFM90_14015 IPR014710 RmlC-like jelly roll fold CFM90_14015 IPR003829 Pirin, N-terminal domain CFM90_14015 IPR008778 Pirin, C-terminal domain CFM90_14015 IPR012093 Pirin CFM90_14015 IPR011051 RmlC-like cupin domain superfamily CFM90_14030 IPR013325 RNA polymerase sigma factor, region 2 CFM90_14030 IPR014284 RNA polymerase sigma-70 like domain CFM90_14030 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_14030 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CFM90_14030 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_14030 IPR007630 RNA polymerase sigma-70 region 4 CFM90_14030 IPR007627 RNA polymerase sigma-70 region 2 CFM90_14030 IPR009042 RNA polymerase sigma-70 region 1.2 CFM90_14030 IPR000943 RNA polymerase sigma-70 CFM90_14035 IPR024473 Transposase, IS4, N-terminal CFM90_14035 IPR002559 Transposase, IS4-like CFM90_14035 IPR012337 Ribonuclease H-like superfamily CFM90_14040 IPR036249 Thioredoxin-like superfamily CFM90_14040 IPR003782 Copper chaperone SCO1/SenC CFM90_14045 IPR030470 UbiA prenyltransferase conserved site CFM90_14045 IPR000537 UbiA prenyltransferase family CFM90_14045 IPR006369 Protohaem IX farnesyltransferase CFM90_14050 IPR023755 Heme A synthase, type 1 CFM90_14050 IPR003780 COX15/CtaA family CFM90_14070 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CFM90_14070 IPR035973 Cytochrome c oxidase subunit III-like superfamily CFM90_14070 IPR000298 Cytochrome c oxidase subunit III-like CFM90_14070 IPR033945 Cytochrome c oxidase subunit III domain CFM90_14070 IPR024791 Cytochrome c oxidase subunit III CFM90_14080 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily CFM90_14080 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 CFM90_14085 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CFM90_14085 IPR023616 Cytochrome c oxidase-like, subunit I domain CFM90_14085 IPR014241 Cytochrome c oxidase, subunit I bacterial type CFM90_14085 IPR033944 Cytochrome c oxidase subunit I domain CFM90_14085 IPR000883 Cytochrome c oxidase subunit I CFM90_14085 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CFM90_14090 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CFM90_14090 IPR001505 Copper centre Cu(A) CFM90_14090 IPR008972 Cupredoxin CFM90_14090 IPR014222 Cytochrome c oxidase, subunit II CFM90_14090 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CFM90_14090 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CFM90_14100 IPR013216 Methyltransferase type 11 CFM90_14100 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CFM90_14100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_14105 IPR005222 Competence protein ComF CFM90_14105 IPR000836 Phosphoribosyltransferase domain CFM90_14105 IPR029057 Phosphoribosyltransferase-like CFM90_14110 IPR001537 tRNA/rRNA methyltransferase, SpoU type CFM90_14110 IPR029028 Alpha/beta knot methyltransferases CFM90_14110 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFM90_14110 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CFM90_14115 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFM90_14115 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_14115 IPR036291 NAD(P)-binding domain superfamily CFM90_14115 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CFM90_14115 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CFM90_14115 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CFM90_14120 IPR035958 SecB-like superfamily CFM90_14120 IPR003708 Bacterial protein export chaperone SecB CFM90_14125 IPR036249 Thioredoxin-like superfamily CFM90_14125 IPR011767 Glutaredoxin active site CFM90_14125 IPR002109 Glutaredoxin CFM90_14125 IPR014025 Glutaredoxin subgroup CFM90_14125 IPR011900 Glutaredoxin, GrxC CFM90_14130 IPR001763 Rhodanese-like domain CFM90_14130 IPR036873 Rhodanese-like domain superfamily CFM90_14135 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CFM90_14135 IPR005952 Phosphoglycerate mutase 1 CFM90_14135 IPR013078 Histidine phosphatase superfamily, clade-1 CFM90_14135 IPR029033 Histidine phosphatase superfamily CFM90_14140 IPR005151 Tail specific protease CFM90_14140 IPR004447 C-terminal-processing peptidase S41A CFM90_14140 IPR036034 PDZ superfamily CFM90_14140 IPR001478 PDZ domain CFM90_14140 IPR029045 ClpP/crotonase-like domain superfamily CFM90_14145 IPR000594 THIF-type NAD/FAD binding fold CFM90_14145 IPR012730 Molybdopterin synthase sulfurylase MoeB CFM90_14145 IPR035985 Ubiquitin-activating enzyme CFM90_14150 IPR009078 Ferritin-like superfamily CFM90_14150 IPR008331 Ferritin/DPS protein domain CFM90_14150 IPR012347 Ferritin-like CFM90_14150 IPR009040 Ferritin-like diiron domain CFM90_14150 IPR002024 Bacterioferritin CFM90_14160 IPR036618 PtsI, HPr-binding domain superfamily CFM90_14160 IPR008279 PEP-utilising enzyme, mobile domain CFM90_14160 IPR018274 PEP-utilising enzyme, active site CFM90_14160 IPR000121 PEP-utilising enzyme, C-terminal CFM90_14160 IPR023151 PEP-utilising enzyme, conserved site CFM90_14160 IPR040442 Pyruvate kinase-like domain superfamily CFM90_14160 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_14160 IPR008731 Phosphotransferase system, enzyme I N-terminal CFM90_14160 IPR006318 Phosphotransferase system, enzyme I-like CFM90_14160 IPR024692 Phosphotransferase system, enzyme I CFM90_14160 IPR036637 Phosphohistidine domain superfamily CFM90_14165 IPR000032 Phosphocarrier protein HPr-like CFM90_14165 IPR035895 HPr-like superfamily CFM90_14165 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CFM90_14165 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CFM90_14175 IPR011761 ATP-grasp fold CFM90_14175 IPR013815 ATP-grasp fold, subdomain 1 CFM90_14175 IPR016185 Pre-ATP-grasp domain superfamily CFM90_14175 IPR006284 Glutathione synthetase, prokaryotic CFM90_14175 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CFM90_14175 IPR004215 Prokaryotic glutathione synthetase, N-terminal CFM90_14185 IPR024473 Transposase, IS4, N-terminal CFM90_14185 IPR002559 Transposase, IS4-like CFM90_14185 IPR012337 Ribonuclease H-like superfamily CFM90_14190 IPR029020 Ammonium/urea transporter CFM90_14190 IPR001905 Ammonium transporter CFM90_14190 IPR018047 Ammonium transporter, conserved site CFM90_14190 IPR024041 Ammonium transporter AmtB-like domain CFM90_14195 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CFM90_14195 IPR002332 Nitrogen regulatory protein P-II, urydylation site CFM90_14195 IPR002187 Nitrogen regulatory protein PII CFM90_14195 IPR017918 Nitrogen regulatory protein PII, conserved site CFM90_14195 IPR011322 Nitrogen regulatory PII-like, alpha/beta CFM90_14205 IPR007475 Ubiquinone biosynthesis accessory factor UbiK CFM90_14215 IPR004482 Mg chelatase-related protein CFM90_14215 IPR003593 AAA+ ATPase domain CFM90_14215 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_14215 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_14215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_14215 IPR000523 Magnesium chelatase ChlI domain CFM90_14215 IPR025158 Mg chelatase-related protein, C-terminal domain CFM90_14215 IPR001208 MCM domain CFM90_14220 IPR008922 Uncharacterised domain, di-copper centre CFM90_14220 IPR002227 Tyrosinase copper-binding domain CFM90_14235 IPR002589 Macro domain CFM90_14240 IPR023555 Thiol-disulphide oxidoreductase ResA CFM90_14240 IPR036249 Thioredoxin-like superfamily CFM90_14240 IPR013766 Thioredoxin domain CFM90_14240 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CFM90_14245 IPR025944 Sigma-54 interaction domain, conserved site CFM90_14245 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_14245 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_14245 IPR001789 Signal transduction response regulator, receiver domain CFM90_14245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_14245 IPR002197 DNA binding HTH domain, Fis-type CFM90_14245 IPR009057 Homeobox-like domain superfamily CFM90_14245 IPR011006 CheY-like superfamily CFM90_14245 IPR003593 AAA+ ATPase domain CFM90_14245 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_14250 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CFM90_14250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_14250 IPR029151 Periplasmic sensor-like domain superfamily CFM90_14250 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_14250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_14250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_14250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_14250 IPR005467 Histidine kinase domain CFM90_14255 IPR018107 Sodium:dicarboxylate symporter, conserved site CFM90_14255 IPR001991 Sodium:dicarboxylate symporter CFM90_14255 IPR036458 Sodium:dicarboxylate symporter superfamily CFM90_14255 IPR023954 C4-dicarboxylate transport protein CFM90_14260 IPR036249 Thioredoxin-like superfamily CFM90_14270 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CFM90_14270 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CFM90_14270 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CFM90_14270 IPR012338 Beta-lactamase/transpeptidase-like CFM90_14270 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CFM90_14270 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CFM90_14275 IPR007454 Uncharacterised protein family UPF0250 CFM90_14275 IPR027471 YbeD-like domain superfamily CFM90_14280 IPR000847 Transcription regulator HTH, LysR CFM90_14280 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_14280 IPR005119 LysR, substrate-binding CFM90_14280 IPR036390 Winged helix DNA-binding domain superfamily CFM90_14290 IPR020605 Octanoyltransferase, conserved site CFM90_14290 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CFM90_14290 IPR000544 Octanoyltransferase CFM90_14295 IPR013785 Aldolase-type TIM barrel CFM90_14295 IPR006638 Elp3/MiaB/NifB CFM90_14295 IPR007197 Radical SAM CFM90_14295 IPR031691 Lipoyl synthase, N-terminal CFM90_14295 IPR003698 Lipoyl synthase CFM90_14310 IPR007312 Phosphoesterase CFM90_14310 IPR017767 Bacterial phospholipase C, phosphocholine-specific CFM90_14310 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_14310 IPR008475 Bacterial phospholipase C, C-terminal domain CFM90_14310 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CFM90_14310 IPR017850 Alkaline-phosphatase-like, core domain superfamily CFM90_14335 IPR003593 AAA+ ATPase domain CFM90_14335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_14335 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CFM90_14335 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CFM90_14335 IPR018449 NIL domain CFM90_14335 IPR026253 Methionine import ATP-binding protein MetN CFM90_14335 IPR003439 ABC transporter-like CFM90_14335 IPR017871 ABC transporter, conserved site CFM90_14340 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CFM90_14340 IPR030802 ABC transporter permease MalE CFM90_14345 IPR036390 Winged helix DNA-binding domain superfamily CFM90_14345 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_14345 IPR008988 Transcriptional repressor, C-terminal CFM90_14345 IPR013196 Helix-turn-helix, type 11 CFM90_14345 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CFM90_14345 IPR003142 Biotin protein ligase, C-terminal CFM90_14345 IPR004409 Biotin operon repressor, helix-turn-helix domain CFM90_14345 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CFM90_14345 IPR030855 Bifunctional ligase/repressor BirA CFM90_14350 IPR004619 Type III pantothenate kinase CFM90_14360 IPR011914 RfaE bifunctional protein, domain II CFM90_14360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_14360 IPR004821 Cytidyltransferase-like domain CFM90_14370 IPR036249 Thioredoxin-like superfamily CFM90_14370 IPR000889 Glutathione peroxidase CFM90_14370 IPR029759 Glutathione peroxidase active site CFM90_14385 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_14385 IPR029045 ClpP/crotonase-like domain superfamily CFM90_14385 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_14415 IPR019913 Pyrimidine utilisation protein RutD CFM90_14415 IPR029058 Alpha/Beta hydrolase fold CFM90_14415 IPR000073 Alpha/beta hydrolase fold-1 CFM90_14420 IPR021951 Protein of unknown function DUF3567 CFM90_14430 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CFM90_14430 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CFM90_14430 IPR036724 Cobalamin-binding domain superfamily CFM90_14430 IPR033706 Methionine synthase, B12-binding domain CFM90_14430 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily CFM90_14430 IPR036594 Methionine synthase domain CFM90_14430 IPR011822 Cobalamin-dependent methionine synthase CFM90_14430 IPR036589 Homocysteine-binding domain superfamily CFM90_14430 IPR003726 Homocysteine-binding domain CFM90_14430 IPR011005 Dihydropteroate synthase-like CFM90_14430 IPR006158 Cobalamin (vitamin B12)-binding domain CFM90_14430 IPR000489 Pterin-binding domain CFM90_14435 IPR011822 Cobalamin-dependent methionine synthase CFM90_14435 IPR036589 Homocysteine-binding domain superfamily CFM90_14435 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CFM90_14435 IPR033706 Methionine synthase, B12-binding domain CFM90_14435 IPR003726 Homocysteine-binding domain CFM90_14435 IPR011005 Dihydropteroate synthase-like CFM90_14435 IPR036724 Cobalamin-binding domain superfamily CFM90_14435 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily CFM90_14435 IPR036594 Methionine synthase domain CFM90_14435 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CFM90_14435 IPR000489 Pterin-binding domain CFM90_14435 IPR006158 Cobalamin (vitamin B12)-binding domain CFM90_14445 IPR011006 CheY-like superfamily CFM90_14445 IPR001789 Signal transduction response regulator, receiver domain CFM90_14445 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_14445 IPR000792 Transcription regulator LuxR, C-terminal CFM90_14450 IPR007492 LytTR DNA-binding domain CFM90_14450 IPR001789 Signal transduction response regulator, receiver domain CFM90_14450 IPR011006 CheY-like superfamily CFM90_14460 IPR012337 Ribonuclease H-like superfamily CFM90_14460 IPR002559 Transposase, IS4-like CFM90_14460 IPR024473 Transposase, IS4, N-terminal CFM90_14465 IPR033480 Single Cache domain 2 CFM90_14465 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CFM90_14465 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_14465 IPR017171 Signal transduction histidine kinase, MctS CFM90_14465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_14475 IPR005148 Arginyl tRNA synthetase N-terminal domain CFM90_14475 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFM90_14475 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CFM90_14475 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CFM90_14475 IPR008909 DALR anticodon binding CFM90_14475 IPR001278 Arginine-tRNA ligase CFM90_14475 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFM90_14485 IPR036249 Thioredoxin-like superfamily CFM90_14485 IPR017937 Thioredoxin, conserved site CFM90_14485 IPR013766 Thioredoxin domain CFM90_14485 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CFM90_14485 IPR012336 Thioredoxin-like fold CFM90_14490 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_14490 IPR036291 NAD(P)-binding domain superfamily CFM90_14500 IPR003346 Transposase, IS116/IS110/IS902 CFM90_14500 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CFM90_14520 IPR008490 Transposase InsH, N-terminal CFM90_14520 IPR002559 Transposase, IS4-like CFM90_14550 IPR007138 Antibiotic biosynthesis monooxygenase domain CFM90_14550 IPR011008 Dimeric alpha-beta barrel CFM90_14560 IPR011789 Cu(I)-responsive transcriptional regulator CFM90_14560 IPR009061 Putative DNA-binding domain superfamily CFM90_14560 IPR000551 MerR-type HTH domain CFM90_14565 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_14565 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_14565 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_14565 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_14565 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_14565 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_14565 IPR006089 Acyl-CoA dehydrogenase, conserved site CFM90_14570 IPR010452 Isocitrate dehydrogenase kinasephosphatase CFM90_14575 IPR036874 Carbonic anhydrase superfamily CFM90_14575 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CFM90_14575 IPR001765 Carbonic anhydrase CFM90_14580 IPR020615 Thiolase, acyl-enzyme intermediate active site CFM90_14580 IPR020610 Thiolase, active site CFM90_14580 IPR020617 Thiolase, C-terminal CFM90_14580 IPR020613 Thiolase, conserved site CFM90_14580 IPR002155 Thiolase CFM90_14580 IPR016039 Thiolase-like CFM90_14580 IPR020616 Thiolase, N-terminal CFM90_14585 IPR036291 NAD(P)-binding domain superfamily CFM90_14585 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_14585 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_14590 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_14590 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_14590 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_14590 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_14590 IPR006089 Acyl-CoA dehydrogenase, conserved site CFM90_14590 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_14590 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_14605 IPR036412 HAD-like superfamily CFM90_14605 IPR023214 HAD superfamily CFM90_14605 IPR041492 Haloacid dehalogenase-like hydrolase CFM90_14605 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CFM90_14605 IPR006439 HAD hydrolase, subfamily IA CFM90_14610 IPR023006 Uncharacterised protein family UPF0225 CFM90_14610 IPR032710 NTF2-like domain superfamily CFM90_14615 IPR034733 Acetyl-CoA carboxylase CFM90_14615 IPR029045 ClpP/crotonase-like domain superfamily CFM90_14615 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CFM90_14615 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CFM90_14625 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB CFM90_14625 IPR029045 ClpP/crotonase-like domain superfamily CFM90_14625 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CFM90_14625 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_14625 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_14630 IPR006638 Elp3/MiaB/NifB CFM90_14630 IPR007197 Radical SAM CFM90_14630 IPR024177 Biotin synthase CFM90_14630 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CFM90_14630 IPR010722 Biotin and thiamin synthesis-associated domain CFM90_14630 IPR013785 Aldolase-type TIM barrel CFM90_14640 IPR005482 Biotin carboxylase, C-terminal CFM90_14640 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CFM90_14640 IPR000089 Biotin/lipoyl attachment CFM90_14640 IPR005481 Biotin carboxylase-like, N-terminal domain CFM90_14640 IPR011054 Rudiment single hybrid motif CFM90_14640 IPR016185 Pre-ATP-grasp domain superfamily CFM90_14640 IPR001882 Biotin-binding site CFM90_14640 IPR011764 Biotin carboxylation domain CFM90_14640 IPR011761 ATP-grasp fold CFM90_14640 IPR011053 Single hybrid motif CFM90_14655 IPR036291 NAD(P)-binding domain superfamily CFM90_14655 IPR023514 Glyoxylate/hydroxypyruvate reductase A CFM90_14655 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CFM90_14660 IPR000891 Pyruvate carboxyltransferase CFM90_14660 IPR013785 Aldolase-type TIM barrel CFM90_14660 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site CFM90_14680 IPR000639 Epoxide hydrolase-like CFM90_14680 IPR029058 Alpha/Beta hydrolase fold CFM90_14680 IPR000073 Alpha/beta hydrolase fold-1 CFM90_14695 IPR003719 Phenazine biosynthesis PhzF protein CFM90_14700 IPR018511 Hemolysin-type calcium-binding conserved site CFM90_14700 IPR028974 TSP type-3 repeat CFM90_14700 IPR003995 RTX toxin determinant A CFM90_14700 IPR011049 Serralysin-like metalloprotease, C-terminal CFM90_14700 IPR010566 Haemolysin-type calcium binding-related CFM90_14700 IPR001343 RTX calcium-binding nonapeptide repeat CFM90_14705 IPR025668 Transposase DDE domain CFM90_14715 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CFM90_14715 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CFM90_14715 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CFM90_14715 IPR036291 NAD(P)-binding domain superfamily CFM90_14715 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_14715 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFM90_14715 IPR022694 3-hydroxyacyl-CoA dehydrogenase CFM90_14720 IPR005119 LysR, substrate-binding CFM90_14720 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_14720 IPR000847 Transcription regulator HTH, LysR CFM90_14720 IPR036390 Winged helix DNA-binding domain superfamily CFM90_14740 IPR032466 Metal-dependent hydrolase CFM90_14740 IPR033932 YtcJ like CFM90_14740 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFM90_14740 IPR013108 Amidohydrolase 3 CFM90_14750 IPR006159 Methylmalonyl-CoA mutase, C-terminal CFM90_14750 IPR036724 Cobalamin-binding domain superfamily CFM90_14750 IPR006158 Cobalamin (vitamin B12)-binding domain CFM90_14750 IPR033669 Fused isobutyryl-CoA mutase CFM90_14750 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic CFM90_14750 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic CFM90_14750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_14750 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic CFM90_14785 IPR010640 Low temperature requirement A CFM90_14790 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_14790 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_14790 IPR004839 Aminotransferase, class I/classII CFM90_14790 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_14800 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily CFM90_14800 IPR017770 RNA 3'-terminal phosphate cyclase type 1 CFM90_14800 IPR000228 RNA 3'-terminal phosphate cyclase CFM90_14800 IPR023797 RNA 3'-terminal phosphate cyclase domain CFM90_14800 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain CFM90_14800 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CFM90_14800 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily CFM90_14800 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site CFM90_14805 IPR018775 RNA repair pathway DNA polymerase beta CFM90_14810 IPR036025 tRNA-splicing ligase RtcB-like superfamily CFM90_14810 IPR001233 tRNA-splicing ligase, RtcB CFM90_14820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_14820 IPR009715 Regulator of RNA terminal phosphate cyclase CFM90_14820 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_14820 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_14820 IPR003593 AAA+ ATPase domain CFM90_14820 IPR017183 Sigma54-dependent transcriptional activator, RtcR CFM90_14835 IPR001792 Acylphosphatase-like domain CFM90_14835 IPR036046 Acylphosphatase-like domain superfamily CFM90_14835 IPR020456 Acylphosphatase CFM90_14855 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CFM90_14855 IPR011701 Major facilitator superfamily CFM90_14855 IPR020846 Major facilitator superfamily domain CFM90_14855 IPR004734 Multidrug resistance protein CFM90_14855 IPR036259 MFS transporter superfamily CFM90_14860 IPR036291 NAD(P)-binding domain superfamily CFM90_14860 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_14860 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_14865 IPR000847 Transcription regulator HTH, LysR CFM90_14865 IPR005119 LysR, substrate-binding CFM90_14865 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_14865 IPR036390 Winged helix DNA-binding domain superfamily CFM90_14870 IPR022955 GMP synthase CFM90_14870 IPR025777 GMP synthetase ATP pyrophosphatase domain CFM90_14870 IPR001674 GMP synthase, C-terminal CFM90_14870 IPR029062 Class I glutamine amidotransferase-like CFM90_14870 IPR022310 NAD/GMP synthase CFM90_14870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_14870 IPR004739 GMP synthase, glutamine amidotransferase CFM90_14870 IPR017926 Glutamine amidotransferase CFM90_14885 IPR002577 Helix-turn-helix, HxlR type CFM90_14885 IPR036390 Winged helix DNA-binding domain superfamily CFM90_14885 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_14905 IPR011701 Major facilitator superfamily CFM90_14905 IPR036259 MFS transporter superfamily CFM90_14905 IPR020846 Major facilitator superfamily domain CFM90_14910 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CFM90_14910 IPR029058 Alpha/Beta hydrolase fold CFM90_14915 IPR005119 LysR, substrate-binding CFM90_14915 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_14915 IPR036390 Winged helix DNA-binding domain superfamily CFM90_14915 IPR000847 Transcription regulator HTH, LysR CFM90_14925 IPR002559 Transposase, IS4-like CFM90_14925 IPR008490 Transposase InsH, N-terminal CFM90_14945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_14945 IPR003593 AAA+ ATPase domain CFM90_14945 IPR003959 ATPase, AAA-type, core CFM90_14970 IPR003593 AAA+ ATPase domain CFM90_14970 IPR002611 IstB-like ATP-binding protein CFM90_14970 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CFM90_14970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_14975 IPR012337 Ribonuclease H-like superfamily CFM90_14975 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type CFM90_14975 IPR001584 Integrase, catalytic core CFM90_14975 IPR036397 Ribonuclease H superfamily CFM90_15005 IPR002559 Transposase, IS4-like CFM90_15005 IPR008490 Transposase InsH, N-terminal CFM90_15050 IPR001584 Integrase, catalytic core CFM90_15050 IPR012337 Ribonuclease H-like superfamily CFM90_15050 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type CFM90_15050 IPR036397 Ribonuclease H superfamily CFM90_15055 IPR003593 AAA+ ATPase domain CFM90_15055 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CFM90_15055 IPR002611 IstB-like ATP-binding protein CFM90_15055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_15095 IPR035466 GlmS/AgaS, SIS domain 1 CFM90_15095 IPR017932 Glutamine amidotransferase type 2 domain CFM90_15095 IPR001347 Sugar isomerase (SIS) CFM90_15095 IPR029055 Nucleophile aminohydrolases, N-terminal CFM90_15095 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CFM90_15095 IPR035490 GlmS/FrlB, SIS domain 2 CFM90_15100 IPR038009 GlmU, C-terminal LbH domain CFM90_15100 IPR001451 Hexapeptide repeat CFM90_15100 IPR025877 MobA-like NTP transferase CFM90_15100 IPR011004 Trimeric LpxA-like superfamily CFM90_15100 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CFM90_15100 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_15110 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_15110 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase CFM90_15110 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CFM90_15115 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFM90_15115 IPR036291 NAD(P)-binding domain superfamily CFM90_15115 IPR013332 Ketopantoate reductase, N-terminal domain CFM90_15115 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_15115 IPR003710 Ketopantoate reductase ApbA/PanE CFM90_15115 IPR013752 Ketopantoate reductase, C-terminal domain CFM90_15120 IPR023214 HAD superfamily CFM90_15120 IPR036412 HAD-like superfamily CFM90_15120 IPR039653 Prenyltransferase CFM90_15120 IPR000537 UbiA prenyltransferase family CFM90_15125 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_15125 IPR016166 FAD-binding domain, PCMH-type CFM90_15125 IPR006094 FAD linked oxidase, N-terminal CFM90_15125 IPR007173 D-arabinono-1,4-lactone oxidase CFM90_15125 IPR016169 FAD-binding, type PCMH, subdomain 2 CFM90_15130 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_15130 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_15130 IPR036291 NAD(P)-binding domain superfamily CFM90_15140 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase CFM90_15140 IPR036291 NAD(P)-binding domain superfamily CFM90_15145 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 CFM90_15145 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_15145 IPR023753 FAD/NAD(P)-binding domain CFM90_15145 IPR028261 Dihydroprymidine dehydrogenase domain II CFM90_15145 IPR009051 Alpha-helical ferredoxin CFM90_15155 IPR003423 Outer membrane efflux protein CFM90_15155 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_15160 IPR000412 ABC-2 transporter CFM90_15165 IPR003593 AAA+ ATPase domain CFM90_15165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_15165 IPR017871 ABC transporter, conserved site CFM90_15165 IPR003439 ABC transporter-like CFM90_15180 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_15180 IPR015590 Aldehyde dehydrogenase domain CFM90_15180 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_15180 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_15180 IPR011264 Betaine aldehyde dehydrogenase CFM90_15180 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFM90_15180 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_15185 IPR005119 LysR, substrate-binding CFM90_15185 IPR036390 Winged helix DNA-binding domain superfamily CFM90_15185 IPR000847 Transcription regulator HTH, LysR CFM90_15185 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain CFM90_15185 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_15190 IPR010164 Ornithine aminotransferase CFM90_15190 IPR034757 Ornithine aminotransferase, bacterial type CFM90_15190 IPR005814 Aminotransferase class-III CFM90_15190 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_15190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_15190 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_15195 IPR020855 Ureohydrolase, manganese-binding site CFM90_15195 IPR014033 Arginase CFM90_15195 IPR023696 Ureohydrolase domain superfamily CFM90_15195 IPR006035 Ureohydrolase CFM90_15205 IPR036291 NAD(P)-binding domain superfamily CFM90_15205 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_15205 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_15215 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 CFM90_15215 IPR036259 MFS transporter superfamily CFM90_15215 IPR020846 Major facilitator superfamily domain CFM90_15215 IPR011701 Major facilitator superfamily CFM90_15230 IPR004779 Carboxylate/Amino Acid/Amine Transporter CFM90_15230 IPR000620 EamA domain CFM90_15235 IPR000415 Nitroreductase-like CFM90_15235 IPR029479 Nitroreductase CFM90_15255 IPR003848 Domain of unknown function DUF218 CFM90_15265 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_15265 IPR005119 LysR, substrate-binding CFM90_15265 IPR036390 Winged helix DNA-binding domain superfamily CFM90_15265 IPR000847 Transcription regulator HTH, LysR CFM90_15265 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain CFM90_15275 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 CFM90_15275 IPR036291 NAD(P)-binding domain superfamily CFM90_15275 IPR000534 Semialdehyde dehydrogenase, NAD-binding CFM90_15280 IPR038972 Inner membrane protein YiaA-like CFM90_15280 IPR008024 YiaAB two helix CFM90_15285 IPR005135 Endonuclease/exonuclease/phosphatase CFM90_15285 IPR004808 AP endonuclease 1 CFM90_15285 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CFM90_15285 IPR020848 AP endonuclease 1, conserved site CFM90_15285 IPR020847 AP endonuclease 1, binding site CFM90_15290 IPR000836 Phosphoribosyltransferase domain CFM90_15290 IPR004467 Orotate phosphoribosyl transferase domain CFM90_15290 IPR023031 Orotate phosphoribosyltransferase CFM90_15290 IPR029057 Phosphoribosyltransferase-like CFM90_15300 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CFM90_15300 IPR003346 Transposase, IS116/IS110/IS902 CFM90_15305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_15305 IPR016898 Polyphosphate kinase 2 CFM90_15305 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 CFM90_15305 IPR022488 Polyphosphate kinase-2-related CFM90_15310 IPR018510 Diaminopimelate epimerase, active site CFM90_15310 IPR001653 Diaminopimelate epimerase, DapF CFM90_15315 IPR004960 Bacterial lipid A biosynthesis acyltransferase CFM90_15315 IPR011921 Lipid A biosynthesis myristoyltransferase CFM90_15325 IPR022628 S-adenosylmethionine synthetase, N-terminal CFM90_15325 IPR022631 S-adenosylmethionine synthetase, conserved site CFM90_15325 IPR022629 S-adenosylmethionine synthetase, central domain CFM90_15325 IPR002133 S-adenosylmethionine synthetase CFM90_15325 IPR022636 S-adenosylmethionine synthetase superfamily CFM90_15325 IPR022630 S-adenosylmethionine synthetase, C-terminal CFM90_15355 IPR000644 CBS domain CFM90_15365 IPR036390 Winged helix DNA-binding domain superfamily CFM90_15365 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_15365 IPR019888 Transcription regulator AsnC-type CFM90_15365 IPR000485 AsnC-type HTH domain CFM90_15365 IPR011008 Dimeric alpha-beta barrel CFM90_15365 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_15365 IPR011991 ArsR-like helix-turn-helix domain CFM90_15365 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_15385 IPR003346 Transposase, IS116/IS110/IS902 CFM90_15385 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CFM90_15400 IPR012132 Glucose-methanol-choline oxidoreductase CFM90_15400 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CFM90_15400 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CFM90_15400 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_15400 IPR027424 Glucose Oxidase, domain 2 CFM90_15405 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_15410 IPR006089 Acyl-CoA dehydrogenase, conserved site CFM90_15410 IPR041504 Adaptive response protein AidB, N-terminal CFM90_15410 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_15410 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_15410 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_15410 IPR034184 Putative acyl-CoA dehydrogenase AidB CFM90_15410 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_15445 IPR013785 Aldolase-type TIM barrel CFM90_15445 IPR004136 Nitronate monooxygenase CFM90_15450 IPR037509 Phosphomethylpyrimidine synthase CFM90_15450 IPR038521 ThiC/Bza superfamily CFM90_15450 IPR025747 ThiC-associated domain CFM90_15450 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B CFM90_15455 IPR023209 D-amino-acid oxidase CFM90_15455 IPR006076 FAD dependent oxidoreductase CFM90_15455 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_15455 IPR012727 Glycine oxidase ThiO CFM90_15465 IPR013785 Aldolase-type TIM barrel CFM90_15465 IPR008867 Thiazole synthase CFM90_15465 IPR033983 Thiazole synthase ThiG CFM90_15470 IPR013785 Aldolase-type TIM barrel CFM90_15470 IPR034291 Thiamine phosphate synthase CFM90_15470 IPR036206 Thiamin phosphate synthase superfamily CFM90_15470 IPR022998 Thiamine phosphate synthase/TenI CFM90_15475 IPR028973 PhnB-like CFM90_15475 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CFM90_15505 IPR029056 Ribokinase-like CFM90_15505 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CFM90_15505 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CFM90_15515 IPR017850 Alkaline-phosphatase-like, core domain superfamily CFM90_15515 IPR018299 Alkaline phosphatase, active site CFM90_15515 IPR001952 Alkaline phosphatase CFM90_15520 IPR001952 Alkaline phosphatase CFM90_15520 IPR017850 Alkaline-phosphatase-like, core domain superfamily CFM90_15520 IPR018299 Alkaline phosphatase, active site CFM90_15525 IPR036291 NAD(P)-binding domain superfamily CFM90_15525 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site CFM90_15525 IPR042172 Adenosylhomocysteinase-like superfamily CFM90_15525 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CFM90_15525 IPR000043 Adenosylhomocysteinase-like CFM90_15530 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV CFM90_15535 IPR029041 FAD-linked oxidoreductase-like CFM90_15535 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase CFM90_15535 IPR004620 5,10-methylenetetrahydrofolate reductase CFM90_15535 IPR003171 Methylenetetrahydrofolate reductase CFM90_15545 IPR002698 5-formyltetrahydrofolate cyclo-ligase CFM90_15545 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CFM90_15545 IPR037171 NagB/RpiA transferase-like CFM90_15550 IPR012289 Lytic transglycosylase, superhelical linker CFM90_15550 IPR008939 Lytic transglycosylase, superhelical U-shaped CFM90_15550 IPR008258 Transglycosylase SLT domain 1 CFM90_15550 IPR000189 Prokaryotic transglycosylase, active site CFM90_15550 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily CFM90_15550 IPR023346 Lysozyme-like domain superfamily CFM90_15560 IPR040079 Glutathione Transferase family CFM90_15560 IPR004045 Glutathione S-transferase, N-terminal CFM90_15560 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_15560 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_15560 IPR004046 Glutathione S-transferase, C-terminal CFM90_15560 IPR040077 Glutathione S-transferase Theta, C-terminal CFM90_15560 IPR036249 Thioredoxin-like superfamily CFM90_15565 IPR002646 Poly A polymerase, head domain CFM90_15565 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CFM90_15565 IPR006674 HD domain CFM90_15565 IPR003607 HD/PDEase domain CFM90_15565 IPR012006 tRNA nucleotidyltransferase, proteobacteria CFM90_15570 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_15575 IPR008567 3-keto-5-aminohexanoate cleavage enzyme CFM90_15575 IPR013785 Aldolase-type TIM barrel CFM90_15580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_15580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_15580 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_15580 IPR005814 Aminotransferase class-III CFM90_15605 IPR001789 Signal transduction response regulator, receiver domain CFM90_15605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_15605 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_15605 IPR003593 AAA+ ATPase domain CFM90_15605 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_15605 IPR009057 Homeobox-like domain superfamily CFM90_15605 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_15605 IPR002197 DNA binding HTH domain, Fis-type CFM90_15605 IPR025944 Sigma-54 interaction domain, conserved site CFM90_15605 IPR011006 CheY-like superfamily CFM90_15610 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_15610 IPR005467 Histidine kinase domain CFM90_15610 IPR000014 PAS domain CFM90_15610 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_15610 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_15610 IPR035965 PAS domain superfamily CFM90_15610 IPR003660 HAMP domain CFM90_15610 IPR013767 PAS fold CFM90_15610 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_15610 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator CFM90_15610 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_15620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_15620 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CFM90_15620 IPR004573 rRNA small subunit methyltransferase B CFM90_15620 IPR023267 RNA (C5-cytosine) methyltransferase CFM90_15620 IPR006027 NusB/RsmB/TIM44 CFM90_15620 IPR035926 NusB-like superfamily CFM90_15620 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CFM90_15625 IPR001915 Peptidase M48 CFM90_15625 IPR022919 Peptidase M48, protease HtpX, putative CFM90_15630 IPR001123 Amino acid exporter protein, LeuE-type CFM90_15630 IPR004778 Homoserine/Threonine efflux protein CFM90_15635 IPR002376 Formyl transferase, N-terminal CFM90_15635 IPR005794 Methionyl-tRNA formyltransferase CFM90_15635 IPR037022 Formyl transferase, C-terminal domain superfamily CFM90_15635 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CFM90_15635 IPR005793 Formyl transferase, C-terminal CFM90_15635 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CFM90_15635 IPR011034 Formyl transferase-like, C-terminal domain superfamily CFM90_15635 IPR036477 Formyl transferase, N-terminal domain superfamily CFM90_15645 IPR023635 Peptide deformylase CFM90_15645 IPR036821 Peptide deformylase superfamily CFM90_15650 IPR018392 LysM domain CFM90_15650 IPR036779 LysM domain superfamily CFM90_15655 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_15655 IPR003488 DNA recombination-mediator protein A CFM90_15655 IPR041614 DprA, winged helix domain CFM90_15665 IPR005738 DNA topoisomerase III CFM90_15665 IPR003601 DNA topoisomerase, type IA, domain 2 CFM90_15665 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CFM90_15665 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CFM90_15665 IPR023405 DNA topoisomerase, type IA, core domain CFM90_15665 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CFM90_15665 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CFM90_15665 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CFM90_15665 IPR006171 TOPRIM domain CFM90_15665 IPR000380 DNA topoisomerase, type IA CFM90_15665 IPR023406 DNA topoisomerase, type IA, active site CFM90_15665 IPR013497 DNA topoisomerase, type IA, central CFM90_15670 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_15670 IPR000847 Transcription regulator HTH, LysR CFM90_15670 IPR005119 LysR, substrate-binding CFM90_15670 IPR036390 Winged helix DNA-binding domain superfamily CFM90_15675 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_15675 IPR042099 AMP-dependent synthetase-like superfamily CFM90_15675 IPR000873 AMP-dependent synthetase/ligase CFM90_15675 IPR020459 AMP-binding CFM90_15675 IPR020845 AMP-binding, conserved site CFM90_15680 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CFM90_15680 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CFM90_15680 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CFM90_15685 IPR012338 Beta-lactamase/transpeptidase-like CFM90_15685 IPR005311 Penicillin-binding protein, dimerisation domain CFM90_15685 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CFM90_15685 IPR017790 Penicillin-binding protein 2 CFM90_15685 IPR001460 Penicillin-binding protein, transpeptidase CFM90_15700 IPR004753 Cell shape determining protein MreB CFM90_15705 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C CFM90_15705 IPR003837 Glu-tRNAGln amidotransferase C subunit CFM90_15710 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CFM90_15710 IPR023631 Amidase signature domain CFM90_15710 IPR020556 Amidase, conserved site CFM90_15710 IPR000120 Amidase CFM90_15710 IPR036928 Amidase signature (AS) superfamily CFM90_15725 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CFM90_15725 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CFM90_15725 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CFM90_15725 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 CFM90_15725 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CFM90_15725 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E CFM90_15725 IPR018027 Asn/Gln amidotransferase CFM90_15725 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CFM90_15725 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CFM90_15735 IPR010998 Integrase/recombinase, N-terminal CFM90_15735 IPR002104 Integrase, catalytic domain CFM90_15735 IPR004107 Integrase, SAM-like, N-terminal CFM90_15735 IPR011931 Tyrosine recombinase XerC CFM90_15735 IPR023009 Tyrosine recombinase XerC/XerD CFM90_15735 IPR011010 DNA breaking-rejoining enzyme, catalytic core CFM90_15735 IPR013762 Integrase-like, catalytic domain superfamily CFM90_15740 IPR041532 RlmI, PUA-like domain CFM90_15740 IPR002478 PUA domain CFM90_15740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_15740 IPR023542 rRNA large subunit methyltransferase I CFM90_15740 IPR019614 S-adenosylmethionine-dependent methyltransferase CFM90_15740 IPR015947 PUA-like superfamily CFM90_15740 IPR036974 PUA domain superfamily CFM90_15745 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_15745 IPR006094 FAD linked oxidase, N-terminal CFM90_15745 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_15745 IPR016166 FAD-binding domain, PCMH-type CFM90_15745 IPR012951 Berberine/berberine-like CFM90_15760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_15760 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CFM90_15760 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CFM90_15760 IPR036627 CobW-like, C-terminal domain superfamily CFM90_15765 IPR000962 Zinc finger, DksA/TraR C4-type CFM90_15765 IPR037187 DksA, N-terminal domain superfamily CFM90_15765 IPR012784 RNA polymerase-binding transcription factor DksA CFM90_15765 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CFM90_15770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_15770 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CFM90_15770 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CFM90_15775 IPR030678 Peptide/nickel binding protein, MppA-type CFM90_15775 IPR039424 Solute-binding protein family 5 CFM90_15775 IPR023765 Solute-binding protein family 5, conserved site CFM90_15775 IPR000914 Solute-binding protein family 5 domain CFM90_15780 IPR029055 Nucleophile aminohydrolases, N-terminal CFM90_15780 IPR023333 Proteasome B-type subunit CFM90_15780 IPR001353 Proteasome, subunit alpha/beta CFM90_15780 IPR022281 ATP-dependent protease, HslV subunit CFM90_15785 IPR004491 Heat shock protein HslU CFM90_15785 IPR019489 Clp ATPase, C-terminal CFM90_15785 IPR003959 ATPase, AAA-type, core CFM90_15785 IPR003593 AAA+ ATPase domain CFM90_15785 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_15795 IPR001789 Signal transduction response regulator, receiver domain CFM90_15795 IPR011006 CheY-like superfamily CFM90_15800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_15800 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_15800 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_15800 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_15800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_15800 IPR005467 Histidine kinase domain CFM90_15825 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_15825 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CFM90_15825 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_15825 IPR039425 RNA polymerase sigma-70 like CFM90_15825 IPR014284 RNA polymerase sigma-70 like domain CFM90_15825 IPR014289 RNA polymerase sigma-24-related CFM90_15825 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CFM90_15825 IPR013325 RNA polymerase sigma factor, region 2 CFM90_15825 IPR007627 RNA polymerase sigma-70 region 2 CFM90_15830 IPR036393 Acetylglutamate kinase-like superfamily CFM90_15830 IPR004662 Acetylglutamate kinase family CFM90_15830 IPR037528 Acetylglutamate kinase ArgB CFM90_15830 IPR041727 N-Acetyl-L-glutamate kinase, cyclic CFM90_15830 IPR001048 Aspartate/glutamate/uridylate kinase CFM90_15840 IPR001647 DNA-binding HTH domain, TetR-type CFM90_15840 IPR023769 Nucleoid occlusion factor SlmA CFM90_15840 IPR009057 Homeobox-like domain superfamily CFM90_15850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_15850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_15850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_15850 IPR003660 HAMP domain CFM90_15850 IPR005467 Histidine kinase domain CFM90_15850 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_15850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_15850 IPR029151 Periplasmic sensor-like domain superfamily CFM90_15855 IPR039420 Transcriptional regulatory protein WalR-like CFM90_15855 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_15855 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_15855 IPR011006 CheY-like superfamily CFM90_15855 IPR001789 Signal transduction response regulator, receiver domain CFM90_15855 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_15860 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_15860 IPR036390 Winged helix DNA-binding domain superfamily CFM90_15860 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_15860 IPR004839 Aminotransferase, class I/classII CFM90_15860 IPR000524 Transcription regulator HTH, GntR CFM90_15860 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_15865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_15865 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_15865 IPR005814 Aminotransferase class-III CFM90_15865 IPR004632 4-aminobutyrate aminotransferase, bacterial CFM90_15865 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_15870 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_15870 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_15870 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFM90_15870 IPR010102 Succinate semialdehyde dehydrogenase CFM90_15870 IPR015590 Aldehyde dehydrogenase domain CFM90_15870 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_15870 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_15875 IPR029058 Alpha/Beta hydrolase fold CFM90_15875 IPR000073 Alpha/beta hydrolase fold-1 CFM90_15875 IPR008220 Homoserine/serine acetyltransferase MetX-like CFM90_15885 IPR012337 Ribonuclease H-like superfamily CFM90_15885 IPR002559 Transposase, IS4-like CFM90_15885 IPR024473 Transposase, IS4, N-terminal CFM90_15900 IPR007423 Selenoprotein, putative CFM90_15905 IPR025299 CstA, C-terminal domain CFM90_15905 IPR003706 CstA, N-terminal domain CFM90_15910 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CFM90_15910 IPR033480 Single Cache domain 2 CFM90_15910 IPR017171 Signal transduction histidine kinase, MctS CFM90_15910 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_15910 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_15915 IPR000792 Transcription regulator LuxR, C-terminal CFM90_15915 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_15915 IPR011006 CheY-like superfamily CFM90_15915 IPR001789 Signal transduction response regulator, receiver domain CFM90_15920 IPR026040 Hydroxypyruvate isomerase-like CFM90_15920 IPR013022 Xylose isomerase-like, TIM barrel domain CFM90_15920 IPR036237 Xylose isomerase-like superfamily CFM90_15930 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_15930 IPR001789 Signal transduction response regulator, receiver domain CFM90_15930 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CFM90_15930 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_15930 IPR011006 CheY-like superfamily CFM90_15930 IPR039420 Transcriptional regulatory protein WalR-like CFM90_15935 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain CFM90_15935 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site CFM90_15935 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CFM90_15935 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CFM90_15935 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal CFM90_15935 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising CFM90_15945 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CFM90_15945 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CFM90_15945 IPR036291 NAD(P)-binding domain superfamily CFM90_15945 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFM90_15950 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CFM90_15950 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type CFM90_15955 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CFM90_15955 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_15955 IPR023753 FAD/NAD(P)-binding domain CFM90_15955 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CFM90_15955 IPR006324 Glutathione-disulphide reductase CFM90_15955 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CFM90_15955 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFM90_15965 IPR013572 Transcription regulator MAATS, C-terminal CFM90_15965 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CFM90_15965 IPR001647 DNA-binding HTH domain, TetR-type CFM90_15965 IPR009057 Homeobox-like domain superfamily CFM90_15965 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CFM90_15970 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFM90_15970 IPR006143 RND efflux pump, membrane fusion protein CFM90_15980 IPR003423 Outer membrane efflux protein CFM90_15980 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_15985 IPR038380 Ribosomal protein S21 superfamily CFM90_15985 IPR001911 Ribosomal protein S21 CFM90_16000 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CFM90_16000 IPR005225 Small GTP-binding protein domain CFM90_16000 IPR025867 MnmE, helical domain CFM90_16000 IPR027368 tRNA modification GTPase MnmE domain 2 CFM90_16000 IPR031168 TrmE-type guanine nucleotide-binding domain CFM90_16000 IPR018948 GTP-binding protein TrmE, N-terminal CFM90_16000 IPR004520 tRNA modification GTPase MnmE CFM90_16000 IPR006073 GTP binding domain CFM90_16000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16005 IPR019998 Membrane insertase YidC CFM90_16005 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CFM90_16005 IPR028053 Membrane insertase YidC, N-terminal CFM90_16005 IPR038210 Membrane insertase YidC, periplasmic domain CFM90_16005 IPR038221 YidC, periplasmic domain superfamily CFM90_16005 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CFM90_16010 IPR002696 Putative membrane protein insertion efficiency factor CFM90_16015 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_16015 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_16015 IPR000100 Ribonuclease P CFM90_16020 IPR020939 Ribosomal protein L34, conserved site CFM90_16020 IPR000271 Ribosomal protein L34 CFM90_16025 IPR010921 Trp repressor/replication initiator CFM90_16025 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16025 IPR038454 DnaA, N-terminal domain superfamily CFM90_16025 IPR024633 DnaA N-terminal domain CFM90_16025 IPR013159 Chromosomal replication initiator, DnaA C-terminal CFM90_16025 IPR013317 Chromosomal replication initiator protein DnaA CFM90_16025 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CFM90_16025 IPR020591 Chromosomal replication control, initiator DnaA-like CFM90_16025 IPR001957 Chromosomal replication control, initiator DnaA CFM90_16025 IPR003593 AAA+ ATPase domain CFM90_16030 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CFM90_16030 IPR022637 DNA polymerase III, beta sliding clamp, central CFM90_16030 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CFM90_16030 IPR001001 DNA polymerase III, beta sliding clamp CFM90_16035 IPR006171 TOPRIM domain CFM90_16035 IPR034160 DNA gyrase subunit B, TOPRIM domain CFM90_16035 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CFM90_16035 IPR018522 DNA topoisomerase, type IIA, conserved site CFM90_16035 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CFM90_16035 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CFM90_16035 IPR001241 DNA topoisomerase, type IIA CFM90_16035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_16035 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_16035 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_16035 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_16035 IPR002288 DNA gyrase B subunit, C-terminal CFM90_16035 IPR011557 DNA gyrase, subunit B CFM90_16035 IPR041423 DNA gyrase subunit B insert domain CFM90_16045 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_16045 IPR028630 RNA polymerase sigma factor RpoD CFM90_16045 IPR017848 RNA polymerase sigma factor, RpoD-like, cyanobacteria CFM90_16045 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CFM90_16045 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_16045 IPR007627 RNA polymerase sigma-70 region 2 CFM90_16045 IPR007630 RNA polymerase sigma-70 region 4 CFM90_16045 IPR007624 RNA polymerase sigma-70 region 3 CFM90_16045 IPR009042 RNA polymerase sigma-70 region 1.2 CFM90_16045 IPR000943 RNA polymerase sigma-70 CFM90_16045 IPR014284 RNA polymerase sigma-70 like domain CFM90_16045 IPR013325 RNA polymerase sigma factor, region 2 CFM90_16050 IPR014762 DNA mismatch repair, conserved site CFM90_16050 IPR002099 DNA mismatch repair protein family, N-terminal CFM90_16050 IPR013507 DNA mismatch repair protein, S5 domain 2-like CFM90_16050 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_16050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_16050 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CFM90_16050 IPR014790 MutL, C-terminal, dimerisation CFM90_16050 IPR042120 MutL, C-terminal domain, dimerisation subdomain CFM90_16050 IPR042121 MutL, C-terminal domain, regulatory subdomain CFM90_16050 IPR037198 MutL, C-terminal domain superfamily CFM90_16050 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_16050 IPR020667 DNA mismatch repair protein, MutL CFM90_16070 IPR004603 DNA mismatch endonuclease vsr CFM90_16070 IPR011335 Restriction endonuclease type II-like CFM90_16075 IPR018117 DNA methylase, C-5 cytosine-specific, active site CFM90_16075 IPR001525 C-5 cytosine methyltransferase CFM90_16075 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CFM90_16075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_16105 IPR003593 AAA+ ATPase domain CFM90_16105 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CFM90_16105 IPR002611 IstB-like ATP-binding protein CFM90_16105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16110 IPR012337 Ribonuclease H-like superfamily CFM90_16110 IPR036397 Ribonuclease H superfamily CFM90_16110 IPR001584 Integrase, catalytic core CFM90_16110 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type CFM90_16120 IPR000594 THIF-type NAD/FAD binding fold CFM90_16120 IPR035985 Ubiquitin-activating enzyme CFM90_16145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16145 IPR003593 AAA+ ATPase domain CFM90_16145 IPR003959 ATPase, AAA-type, core CFM90_16145 IPR027543 Lon protease, bacterial CFM90_16145 IPR004815 Lon protease, bacterial/eukaryotic-type CFM90_16145 IPR008269 Peptidase S16, Lon proteolytic domain CFM90_16145 IPR027065 Lon protease CFM90_16145 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_16145 IPR003111 Lon, substrate-binding domain CFM90_16145 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_16195 IPR004437 ParB/RepB/Spo0J partition protein CFM90_16195 IPR036086 ParB/Sulfiredoxin superfamily CFM90_16195 IPR003115 ParB/Sulfiredoxin CFM90_16230 IPR021134 Bestrophin/UPF0187 CFM90_16240 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_16240 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_16240 IPR004090 Chemotaxis methyl-accepting receptor CFM90_16240 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_16240 IPR003660 HAMP domain CFM90_16240 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_16250 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_16250 IPR018313 Solute-binding protein family 3, conserved site CFM90_16250 IPR001320 Ionotropic glutamate receptor CFM90_16260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16260 IPR017871 ABC transporter, conserved site CFM90_16260 IPR003439 ABC transporter-like CFM90_16260 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFM90_16260 IPR003593 AAA+ ATPase domain CFM90_16265 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_16265 IPR006076 FAD dependent oxidoreductase CFM90_16280 IPR011006 CheY-like superfamily CFM90_16280 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_16280 IPR001789 Signal transduction response regulator, receiver domain CFM90_16280 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_16280 IPR039420 Transcriptional regulatory protein WalR-like CFM90_16285 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_16285 IPR005467 Histidine kinase domain CFM90_16285 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_16285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_16285 IPR013727 Two-component sensor kinase, N-terminal CFM90_16285 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_16285 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_16300 IPR011701 Major facilitator superfamily CFM90_16300 IPR020846 Major facilitator superfamily domain CFM90_16300 IPR036259 MFS transporter superfamily CFM90_16310 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CFM90_16310 IPR017927 FAD-binding domain, ferredoxin reductase-type CFM90_16310 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CFM90_16310 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CFM90_16310 IPR009050 Globin-like superfamily CFM90_16310 IPR012292 Globin/Protoglobin CFM90_16310 IPR023950 Flavohemoprotein CFM90_16310 IPR001433 Oxidoreductase FAD/NAD(P)-binding CFM90_16310 IPR000971 Globin CFM90_16310 IPR017938 Riboflavin synthase-like beta-barrel CFM90_16315 IPR036390 Winged helix DNA-binding domain superfamily CFM90_16315 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_16315 IPR030489 Transcription regulator Rrf2-type, conserved site CFM90_16315 IPR000944 Transcription regulator Rrf2-type CFM90_16320 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CFM90_16320 IPR003356 DNA methylase, adenine-specific CFM90_16320 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CFM90_16320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_16320 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFM90_16335 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_16335 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_16335 IPR005467 Histidine kinase domain CFM90_16335 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_16335 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_16335 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_16340 IPR011006 CheY-like superfamily CFM90_16340 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_16340 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_16340 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_16340 IPR001789 Signal transduction response regulator, receiver domain CFM90_16340 IPR039420 Transcriptional regulatory protein WalR-like CFM90_16365 IPR013515 Phytochrome, central region CFM90_16365 IPR001633 EAL domain CFM90_16365 IPR035919 EAL domain superfamily CFM90_16365 IPR003018 GAF domain CFM90_16365 IPR029016 GAF-like domain superfamily CFM90_16365 IPR000160 GGDEF domain CFM90_16365 IPR029787 Nucleotide cyclase CFM90_16365 IPR016132 Phytochrome chromophore attachment domain CFM90_16365 IPR001294 Phytochrome CFM90_16370 IPR004872 Lipoprotein NlpA family CFM90_16375 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_16375 IPR038318 KdpD, transmembrane domain superfamily CFM90_16375 IPR025201 Sensor protein KdpD, transmembrane domain CFM90_16375 IPR005467 Histidine kinase domain CFM90_16375 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CFM90_16375 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_16375 IPR029016 GAF-like domain superfamily CFM90_16375 IPR003018 GAF domain CFM90_16375 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_16375 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_16375 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_16380 IPR003820 Potassium-transporting ATPase C chain CFM90_16385 IPR023298 P-type ATPase, transmembrane domain superfamily CFM90_16385 IPR008250 P-type ATPase, A domain superfamily CFM90_16385 IPR023214 HAD superfamily CFM90_16385 IPR006391 P-type ATPase, B chain, subfamily IA CFM90_16385 IPR001757 P-type ATPase CFM90_16385 IPR023299 P-type ATPase, cytoplasmic domain N CFM90_16385 IPR018303 P-type ATPase, phosphorylation site CFM90_16385 IPR036412 HAD-like superfamily CFM90_16390 IPR004623 Potassium-transporting ATPase A chain CFM90_16425 IPR010049 MTA/SAH nucleosidase CFM90_16425 IPR000845 Nucleoside phosphorylase domain CFM90_16425 IPR035994 Nucleoside phosphorylase superfamily CFM90_16435 IPR003439 ABC transporter-like CFM90_16435 IPR003593 AAA+ ATPase domain CFM90_16435 IPR017871 ABC transporter, conserved site CFM90_16435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16445 IPR001792 Acylphosphatase-like domain CFM90_16445 IPR017968 Acylphosphatase, conserved site CFM90_16445 IPR020456 Acylphosphatase CFM90_16445 IPR036046 Acylphosphatase-like domain superfamily CFM90_16455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_16455 IPR007473 Ribosomal RNA large subunit methyltransferase J CFM90_16460 IPR003673 CoA-transferase family III CFM90_16460 IPR023606 CoA-transferase family III domain superfamily CFM90_16475 IPR036707 Cell division topological specificity factor MinE superfamily CFM90_16475 IPR005527 Cell division topological specificity factor MinE CFM90_16480 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CFM90_16480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16480 IPR025501 ATP binding protein MinD CFM90_16480 IPR010223 ATP binding protein MinD, bacterial-type CFM90_16485 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily CFM90_16485 IPR007874 Septum formation inhibitor MinC, N-terminal CFM90_16485 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CFM90_16485 IPR013033 Septum formation inhibitor MinC CFM90_16485 IPR005526 Septum formation inhibitor MinC, C-terminal CFM90_16485 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily CFM90_16490 IPR029052 Metallo-dependent phosphatase-like CFM90_16490 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CFM90_16490 IPR041827 CpdB, N-terminal metallophosphatase domain CFM90_16490 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CFM90_16490 IPR006146 5'-Nucleotidase, conserved site CFM90_16490 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CFM90_16490 IPR008334 5'-Nucleotidase, C-terminal CFM90_16490 IPR006179 5'-Nucleotidase/apyrase CFM90_16500 IPR036291 NAD(P)-binding domain superfamily CFM90_16500 IPR013752 Ketopantoate reductase, C-terminal domain CFM90_16500 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFM90_16500 IPR013332 Ketopantoate reductase, N-terminal domain CFM90_16500 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_16510 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CFM90_16510 IPR020816 Histone-like DNA-binding protein, conserved site CFM90_16510 IPR000119 Histone-like DNA-binding protein CFM90_16525 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily CFM90_16525 IPR001533 Pterin 4 alpha carbinolamine dehydratase CFM90_16530 IPR036951 Aromatic amino acid hydroxylase superfamily CFM90_16530 IPR005960 Phenylalanine-4-hydroxylase, monomeric form CFM90_16530 IPR019774 Aromatic amino acid hydroxylase, C-terminal CFM90_16530 IPR001273 Aromatic amino acid hydroxylase CFM90_16530 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site CFM90_16530 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily CFM90_16535 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_16535 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_16535 IPR036390 Winged helix DNA-binding domain superfamily CFM90_16535 IPR019888 Transcription regulator AsnC-type CFM90_16535 IPR011008 Dimeric alpha-beta barrel CFM90_16535 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_16535 IPR000485 AsnC-type HTH domain CFM90_16535 IPR011991 ArsR-like helix-turn-helix domain CFM90_16540 IPR012506 YhhN-like CFM90_16545 IPR023401 Ornithine cyclodeaminase, N-terminal CFM90_16545 IPR036291 NAD(P)-binding domain superfamily CFM90_16545 IPR003462 Ornithine cyclodeaminase/mu-crystallin CFM90_16550 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CFM90_16550 IPR005618 Outer membrane protein, OmpW CFM90_16560 IPR017969 Heavy-metal-associated, conserved site CFM90_16560 IPR023299 P-type ATPase, cytoplasmic domain N CFM90_16560 IPR018303 P-type ATPase, phosphorylation site CFM90_16560 IPR023298 P-type ATPase, transmembrane domain superfamily CFM90_16560 IPR008250 P-type ATPase, A domain superfamily CFM90_16560 IPR036412 HAD-like superfamily CFM90_16560 IPR023214 HAD superfamily CFM90_16560 IPR006122 Heavy metal-associated domain, copper ion-binding CFM90_16560 IPR036163 Heavy metal-associated domain superfamily CFM90_16560 IPR027256 P-type ATPase, subfamily IB CFM90_16560 IPR001757 P-type ATPase CFM90_16560 IPR006121 Heavy metal-associated domain, HMA CFM90_16565 IPR009061 Putative DNA-binding domain superfamily CFM90_16565 IPR011789 Cu(I)-responsive transcriptional regulator CFM90_16565 IPR015358 Transcription regulator MerR, DNA binding CFM90_16565 IPR000551 MerR-type HTH domain CFM90_16570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_16570 IPR022744 Methyltransferase domain, putative CFM90_16570 IPR022742 Serine aminopeptidase, S33 CFM90_16570 IPR029058 Alpha/Beta hydrolase fold CFM90_16575 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CFM90_16575 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CFM90_16575 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_16575 IPR027424 Glucose Oxidase, domain 2 CFM90_16575 IPR012132 Glucose-methanol-choline oxidoreductase CFM90_16580 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFM90_16580 IPR017871 ABC transporter, conserved site CFM90_16580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16580 IPR003439 ABC transporter-like CFM90_16580 IPR003593 AAA+ ATPase domain CFM90_16585 IPR003593 AAA+ ATPase domain CFM90_16585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16585 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CFM90_16585 IPR003439 ABC transporter-like CFM90_16585 IPR017871 ABC transporter, conserved site CFM90_16595 IPR001851 ABC transporter, permease CFM90_16615 IPR002781 Transmembrane protein TauE-like CFM90_16630 IPR036390 Winged helix DNA-binding domain superfamily CFM90_16630 IPR000847 Transcription regulator HTH, LysR CFM90_16630 IPR005119 LysR, substrate-binding CFM90_16630 IPR037420 HTH-type transcriptional activator AmpR, PBP2 CFM90_16630 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_16635 IPR024530 Putative quorum-sensing-regulated virulence factor CFM90_16640 IPR036390 Winged helix DNA-binding domain superfamily CFM90_16640 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_16640 IPR005119 LysR, substrate-binding CFM90_16640 IPR000847 Transcription regulator HTH, LysR CFM90_16660 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_16660 IPR026904 GidA associated domain 3 CFM90_16660 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CFM90_16660 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CFM90_16660 IPR020595 MnmG-related, conserved site CFM90_16665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_16665 IPR003682 rRNA small subunit methyltransferase G CFM90_16670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16670 IPR025669 AAA domain CFM90_16675 IPR036086 ParB/Sulfiredoxin superfamily CFM90_16675 IPR003115 ParB/Sulfiredoxin CFM90_16675 IPR041468 ParB/Spo0J, HTH domain CFM90_16675 IPR004437 ParB/RepB/Spo0J partition protein CFM90_16685 IPR035908 ATP synthase, F0 complex, subunit A superfamily CFM90_16685 IPR023011 ATP synthase, F0 complex, subunit A, active site CFM90_16685 IPR000568 ATP synthase, F0 complex, subunit A CFM90_16690 IPR035921 F/V-ATP synthase subunit C superfamily CFM90_16690 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CFM90_16690 IPR000454 ATP synthase, F0 complex, subunit C CFM90_16690 IPR002379 V-ATPase proteolipid subunit C-like domain CFM90_16690 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CFM90_16690 IPR038662 F1F0 ATP synthase subunit C superfamily CFM90_16695 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CFM90_16695 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CFM90_16695 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CFM90_16700 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CFM90_16700 IPR000711 ATPase, OSCP/delta subunit CFM90_16705 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CFM90_16705 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CFM90_16705 IPR000793 ATP synthase, alpha subunit, C-terminal CFM90_16705 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CFM90_16705 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CFM90_16705 IPR005294 ATP synthase, F1 complex, alpha subunit CFM90_16705 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CFM90_16705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16705 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CFM90_16705 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CFM90_16710 IPR000131 ATP synthase, F1 complex, gamma subunit CFM90_16710 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site CFM90_16710 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CFM90_16715 IPR005722 ATP synthase, F1 complex, beta subunit CFM90_16715 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CFM90_16715 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CFM90_16715 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CFM90_16715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16715 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CFM90_16715 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CFM90_16715 IPR003593 AAA+ ATPase domain CFM90_16720 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CFM90_16720 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CFM90_16720 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CFM90_16720 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CFM90_16720 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CFM90_16735 IPR003781 CoA-binding CFM90_16735 IPR036291 NAD(P)-binding domain superfamily CFM90_16740 IPR013094 Alpha/beta hydrolase fold-3 CFM90_16740 IPR029058 Alpha/Beta hydrolase fold CFM90_16750 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CFM90_16750 IPR024370 PBP domain CFM90_16755 IPR036249 Thioredoxin-like superfamily CFM90_16755 IPR010987 Glutathione S-transferase, C-terminal-like CFM90_16755 IPR004046 Glutathione S-transferase, C-terminal CFM90_16755 IPR004045 Glutathione S-transferase, N-terminal CFM90_16755 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CFM90_16755 IPR040079 Glutathione Transferase family CFM90_16765 IPR000727 Target SNARE coiled-coil homology domain CFM90_16765 IPR004090 Chemotaxis methyl-accepting receptor CFM90_16765 IPR033479 Double Cache domain 1 CFM90_16765 IPR029151 Periplasmic sensor-like domain superfamily CFM90_16765 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_16765 IPR003660 HAMP domain CFM90_16785 IPR038071 UROD/MetE-like superfamily CFM90_16785 IPR006361 Uroporphyrinogen decarboxylase HemE CFM90_16785 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CFM90_16790 IPR041222 Primosomal protein N', 3' DNA-binding domain CFM90_16790 IPR005259 Primosomal protein N' CFM90_16790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16790 IPR041236 Primosomal protein N, C-terminal domain CFM90_16790 IPR001650 Helicase, C-terminal CFM90_16790 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFM90_16790 IPR011545 DEAD/DEAH box helicase domain CFM90_16790 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CFM90_16790 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CFM90_16795 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_16795 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CFM90_16795 IPR013321 Arc-type ribbon-helix-helix CFM90_16795 IPR025703 Bifunctional protein PutA CFM90_16795 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_16795 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_16795 IPR010985 Ribbon-helix-helix CFM90_16795 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_16795 IPR002872 Proline dehydrogenase domain CFM90_16795 IPR024089 Proline dehydrogenase PutA, domain I/II CFM90_16795 IPR024090 Proline dehydrogenase PutA, domain I CFM90_16795 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain CFM90_16795 IPR029041 FAD-linked oxidoreductase-like CFM90_16795 IPR015590 Aldehyde dehydrogenase domain CFM90_16795 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFM90_16795 IPR024082 Proline dehydrogenase PutA, domain II CFM90_16800 IPR028082 Periplasmic binding protein-like I CFM90_16800 IPR000709 Leu/Ile/Val-binding protein CFM90_16800 IPR028081 Leucine-binding protein domain CFM90_16810 IPR011793 Putative glutamate--cysteine ligase YbdK CFM90_16810 IPR006336 Glutamate--cysteine ligase, GCS2 CFM90_16810 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CFM90_16815 IPR004814 Oligopeptide transporter OPT CFM90_16815 IPR004813 Oligopeptide transporter, OPT superfamily CFM90_16820 IPR005131 Serine dehydratase beta chain CFM90_16820 IPR005130 Serine dehydratase-like, alpha subunit CFM90_16820 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CFM90_16820 IPR029009 Allosteric substrate binding domain superfamily CFM90_16825 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_16825 IPR020581 Glycine cleavage system P protein CFM90_16825 IPR003437 Glycine dehydrogenase (decarboxylating) CFM90_16825 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_16825 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_16830 IPR000089 Biotin/lipoyl attachment CFM90_16830 IPR002930 Glycine cleavage system H-protein CFM90_16830 IPR017453 Glycine cleavage system H-protein, subgroup CFM90_16830 IPR011053 Single hybrid motif CFM90_16830 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CFM90_16830 IPR033753 Glycine cleavage system H-protein/Simiate CFM90_16835 IPR022903 Glycine cleavage system T protein, bacteria CFM90_16835 IPR028896 Aminomethyltransferase-like CFM90_16835 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CFM90_16835 IPR006222 Aminomethyltransferase, folate-binding domain CFM90_16835 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CFM90_16835 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CFM90_16835 IPR006223 Glycine cleavage system T protein CFM90_16855 IPR013986 DExx box DNA helicase domain superfamily CFM90_16855 IPR034739 UvrD/AddA helicase, N-terminal CFM90_16855 IPR014016 UvrD-like helicase, ATP-binding domain CFM90_16855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_16855 IPR005752 ATP-dependent DNA helicase Rep CFM90_16855 IPR000212 DNA helicase, UvrD/REP type CFM90_16855 IPR014017 UvrD-like DNA helicase, C-terminal CFM90_16875 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_16875 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CFM90_16875 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_16875 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CFM90_16875 IPR000792 Transcription regulator LuxR, C-terminal CFM90_16880 IPR001690 Autoinducer synthase CFM90_16880 IPR016181 Acyl-CoA N-acyltransferase CFM90_16880 IPR018311 Autoinducer synthesis, conserved site CFM90_16890 IPR010723 HemN, C-terminal CFM90_16890 IPR007197 Radical SAM CFM90_16890 IPR006638 Elp3/MiaB/NifB CFM90_16890 IPR034505 Anaerobic coproporphyrinogen-III oxidase CFM90_16890 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN CFM90_16890 IPR023404 Radical SAM, alpha/beta horseshoe CFM90_16895 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CFM90_16895 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFM90_16895 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CFM90_16895 IPR006398 2-hydroxy-3-oxopropionate reductase CFM90_16895 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CFM90_16895 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_16895 IPR036291 NAD(P)-binding domain superfamily CFM90_16895 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CFM90_16905 IPR013022 Xylose isomerase-like, TIM barrel domain CFM90_16905 IPR036237 Xylose isomerase-like superfamily CFM90_16905 IPR026040 Hydroxypyruvate isomerase-like CFM90_16905 IPR017643 Hydroxypyruvate isomerase CFM90_16910 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CFM90_16910 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CFM90_16910 IPR029035 DHS-like NAD/FAD-binding domain superfamily CFM90_16910 IPR006397 Glyoxylate carboligase CFM90_16910 IPR029061 Thiamin diphosphate-binding fold CFM90_16910 IPR012000 Thiamine pyrophosphate enzyme, central domain CFM90_16915 IPR000847 Transcription regulator HTH, LysR CFM90_16915 IPR036390 Winged helix DNA-binding domain superfamily CFM90_16915 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_16915 IPR005119 LysR, substrate-binding CFM90_16930 IPR015796 Impact family, bacterial/archaeal CFM90_16930 IPR001498 Impact, N-terminal CFM90_16930 IPR035647 EF-G domain III/V-like CFM90_16930 IPR036956 Impact, N-terminal domain superfamily CFM90_16930 IPR023582 Impact family CFM90_16930 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CFM90_16930 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CFM90_16930 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_16940 IPR001991 Sodium:dicarboxylate symporter CFM90_16940 IPR036458 Sodium:dicarboxylate symporter superfamily CFM90_16940 IPR023954 C4-dicarboxylate transport protein CFM90_16940 IPR018107 Sodium:dicarboxylate symporter, conserved site CFM90_16945 IPR008979 Galactose-binding-like domain superfamily CFM90_16945 IPR005164 Allantoicase CFM90_16945 IPR015908 Allantoicase domain CFM90_16950 IPR024060 Ureidoglycolate lyase domain superfamily CFM90_16950 IPR023525 Ureidoglycolate lyase, bacterial CFM90_16950 IPR007247 Ureidoglycolate lyase CFM90_16950 IPR011051 RmlC-like cupin domain superfamily CFM90_16955 IPR011650 Peptidase M20, dimerisation domain CFM90_16955 IPR002933 Peptidase M20 CFM90_16955 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_16955 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CFM90_16955 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CFM90_16965 IPR036249 Thioredoxin-like superfamily CFM90_16965 IPR006660 Arsenate reductase-like CFM90_16965 IPR006659 Arsenate reductase CFM90_16980 IPR001279 Metallo-beta-lactamase CFM90_16980 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_16985 IPR036908 RlpA-like domain superfamily CFM90_16985 IPR034718 Endolytic peptidoglycan transglycosylase RlpA CFM90_16985 IPR009009 RlpA-like protein, double-psi beta-barrel domain CFM90_16985 IPR012997 Rare lipoprotein A CFM90_16985 IPR007730 Sporulation-like domain CFM90_16990 IPR014777 Tetrapyrrole methylase, subdomain 1 CFM90_16990 IPR014776 Tetrapyrrole methylase, subdomain 2 CFM90_16990 IPR008189 rRNA small subunit methyltransferase I CFM90_16990 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CFM90_16990 IPR035996 Tetrapyrrole methylase superfamily CFM90_16990 IPR000878 Tetrapyrrole methylase CFM90_16995 IPR011335 Restriction endonuclease type II-like CFM90_16995 IPR003509 Uncharacterised protein family UPF0102 CFM90_16995 IPR011856 tRNA endonuclease-like domain superfamily CFM90_17010 IPR023753 FAD/NAD(P)-binding domain CFM90_17010 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding CFM90_17010 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CFM90_17010 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_17010 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily CFM90_17010 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CFM90_17010 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_17015 IPR000620 EamA domain CFM90_17020 IPR009056 Cytochrome c-like domain CFM90_17020 IPR036909 Cytochrome c-like domain superfamily CFM90_17020 IPR002324 Cytochrome c, class ID CFM90_17040 IPR036909 Cytochrome c-like domain superfamily CFM90_17040 IPR025710 L-cysteine S-thiosulfotransferase subunit SoxA CFM90_17045 IPR009056 Cytochrome c-like domain CFM90_17045 IPR036909 Cytochrome c-like domain superfamily CFM90_17045 IPR030999 Sulfur oxidation c-type cytochrome SoxX CFM90_17045 IPR016823 Sulfur oxidation c-type cytochrome SoxX, type II CFM90_17050 IPR017937 Thioredoxin, conserved site CFM90_17050 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CFM90_17050 IPR013740 Redoxin CFM90_17050 IPR036249 Thioredoxin-like superfamily CFM90_17050 IPR013766 Thioredoxin domain CFM90_17055 IPR041827 CpdB, N-terminal metallophosphatase domain CFM90_17055 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CFM90_17055 IPR029052 Metallo-dependent phosphatase-like CFM90_17055 IPR006179 5'-Nucleotidase/apyrase CFM90_17055 IPR019931 LPXTG cell wall anchor domain CFM90_17055 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CFM90_17055 IPR008334 5'-Nucleotidase, C-terminal CFM90_17055 IPR006146 5'-Nucleotidase, conserved site CFM90_17085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_17085 IPR002611 IstB-like ATP-binding protein CFM90_17085 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CFM90_17085 IPR003593 AAA+ ATPase domain CFM90_17090 IPR036397 Ribonuclease H superfamily CFM90_17090 IPR012337 Ribonuclease H-like superfamily CFM90_17090 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type CFM90_17090 IPR001584 Integrase, catalytic core CFM90_17110 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CFM90_17110 IPR006120 Resolvase, HTH domain CFM90_17110 IPR006118 Recombinase, conserved site CFM90_17110 IPR006119 Resolvase, N-terminal catalytic domain CFM90_17125 IPR034703 Proton/glutamate-aspartate symporter GltP CFM90_17125 IPR001991 Sodium:dicarboxylate symporter CFM90_17125 IPR018107 Sodium:dicarboxylate symporter, conserved site CFM90_17125 IPR036458 Sodium:dicarboxylate symporter superfamily CFM90_17125 IPR033380 Glutamate-aspartate symport protein GltP/GltT CFM90_17130 IPR012787 Pca transcription factor PcaQ CFM90_17130 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_17130 IPR036390 Winged helix DNA-binding domain superfamily CFM90_17130 IPR005119 LysR, substrate-binding CFM90_17130 IPR000847 Transcription regulator HTH, LysR CFM90_17135 IPR023702 D-cysteine desulphhydrase, bacterial CFM90_17135 IPR005966 D-cysteine desulfhydrase CFM90_17135 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CFM90_17135 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_17135 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_17140 IPR036259 MFS transporter superfamily CFM90_17140 IPR011701 Major facilitator superfamily CFM90_17140 IPR020846 Major facilitator superfamily domain CFM90_17145 IPR001123 Amino acid exporter protein, LeuE-type CFM90_17145 IPR004778 Homoserine/Threonine efflux protein CFM90_17165 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_17165 IPR008076 Cyanate hydratase CFM90_17165 IPR003712 Cyanate lyase, C-terminal CFM90_17165 IPR036581 Cyanate lyase, C-terminal domain superfamily CFM90_17170 IPR000524 Transcription regulator HTH, GntR CFM90_17170 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_17170 IPR036390 Winged helix DNA-binding domain superfamily CFM90_17170 IPR004839 Aminotransferase, class I/classII CFM90_17170 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_17170 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_17170 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_17175 IPR006680 Amidohydrolase-related CFM90_17175 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFM90_17175 IPR032466 Metal-dependent hydrolase CFM90_17175 IPR023512 Deaminase MtaD/DadD CFM90_17190 IPR019734 Tetratricopeptide repeat CFM90_17190 IPR011990 Tetratricopeptide-like helical domain superfamily CFM90_17190 IPR013026 Tetratricopeptide repeat-containing domain CFM90_17190 IPR029787 Nucleotide cyclase CFM90_17190 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CFM90_17195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_17195 IPR002891 Adenylyl-sulfate kinase CFM90_17210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_17210 IPR013026 Tetratricopeptide repeat-containing domain CFM90_17210 IPR011990 Tetratricopeptide-like helical domain superfamily CFM90_17210 IPR019734 Tetratricopeptide repeat CFM90_17220 IPR011006 CheY-like superfamily CFM90_17220 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_17220 IPR001789 Signal transduction response regulator, receiver domain CFM90_17220 IPR000792 Transcription regulator LuxR, C-terminal CFM90_17235 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_17235 IPR028261 Dihydroprymidine dehydrogenase domain II CFM90_17235 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_17235 IPR023753 FAD/NAD(P)-binding domain CFM90_17235 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 CFM90_17235 IPR009051 Alpha-helical ferredoxin CFM90_17250 IPR012156 Cold shock, CspA CFM90_17250 IPR011129 Cold shock domain CFM90_17250 IPR019844 Cold-shock (CSD) domain CFM90_17250 IPR012340 Nucleic acid-binding, OB-fold CFM90_17250 IPR002059 Cold-shock protein, DNA-binding CFM90_17280 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_17290 IPR001387 Cro/C1-type helix-turn-helix domain CFM90_17290 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_17315 IPR003018 GAF domain CFM90_17315 IPR000160 GGDEF domain CFM90_17315 IPR035919 EAL domain superfamily CFM90_17315 IPR001633 EAL domain CFM90_17315 IPR029787 Nucleotide cyclase CFM90_17315 IPR016132 Phytochrome chromophore attachment domain CFM90_17315 IPR001294 Phytochrome CFM90_17315 IPR013515 Phytochrome, central region CFM90_17315 IPR029016 GAF-like domain superfamily CFM90_17330 IPR001940 Peptidase S1C CFM90_17330 IPR009003 Peptidase S1, PA clan CFM90_17330 IPR036034 PDZ superfamily CFM90_17330 IPR001478 PDZ domain CFM90_17340 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_17340 IPR036291 NAD(P)-binding domain superfamily CFM90_17350 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_17350 IPR004090 Chemotaxis methyl-accepting receptor CFM90_17350 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_17350 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_17350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_17350 IPR003660 HAMP domain CFM90_17365 IPR016181 Acyl-CoA N-acyltransferase CFM90_17365 IPR000182 GNAT domain CFM90_17375 IPR036291 NAD(P)-binding domain superfamily CFM90_17375 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CFM90_17375 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CFM90_17375 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CFM90_17375 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFM90_17380 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_17380 IPR020843 Polyketide synthase, enoylreductase domain CFM90_17380 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_17380 IPR011032 GroES-like superfamily CFM90_17380 IPR036291 NAD(P)-binding domain superfamily CFM90_17380 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CFM90_17385 IPR002197 DNA binding HTH domain, Fis-type CFM90_17385 IPR009057 Homeobox-like domain superfamily CFM90_17385 IPR029016 GAF-like domain superfamily CFM90_17385 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_17385 IPR003018 GAF domain CFM90_17385 IPR003593 AAA+ ATPase domain CFM90_17385 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_17385 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_17385 IPR025944 Sigma-54 interaction domain, conserved site CFM90_17385 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_17390 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_17390 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_17390 IPR015590 Aldehyde dehydrogenase domain CFM90_17390 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_17390 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_17390 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFM90_17395 IPR010628 Ethanolamine ammonia lyase large subunit CFM90_17395 IPR013785 Aldolase-type TIM barrel CFM90_17400 IPR009246 Ethanolamine ammonia-lyase light chain CFM90_17400 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal CFM90_17400 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal CFM90_17405 IPR013620 Exodeoxyribonuclease I, C-terminal CFM90_17405 IPR034748 Exonuclease I, C-terminal alpha-helical domain CFM90_17405 IPR013520 Exonuclease, RNase T/DNA polymerase III CFM90_17405 IPR034747 Exonuclease I, SH3-like domain CFM90_17405 IPR038649 Exonuclease I, SH3-like domain superfamily CFM90_17405 IPR036397 Ribonuclease H superfamily CFM90_17405 IPR012337 Ribonuclease H-like superfamily CFM90_17405 IPR023607 Exodeoxyribonuclease I CFM90_17435 IPR036390 Winged helix DNA-binding domain superfamily CFM90_17435 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_17435 IPR004839 Aminotransferase, class I/classII CFM90_17435 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_17435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_17435 IPR000524 Transcription regulator HTH, GntR CFM90_17450 IPR018076 Type II secretion system F domain CFM90_17450 IPR042094 Type II secretion system F domain superfamily CFM90_17450 IPR001992 Type II secretion system conserved site CFM90_17450 IPR011850 General secretion pathway protein F CFM90_17450 IPR003004 GspF/PilC family CFM90_17455 IPR013369 Type II secretion system GspE CFM90_17455 IPR003593 AAA+ ATPase domain CFM90_17455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_17455 IPR001482 Type II/IV secretion system protein CFM90_17455 IPR037257 General secretory system II, protein E, N-terminal superfamily CFM90_17460 IPR001775 GspD/PilQ family CFM90_17460 IPR038591 NolW-like superfamily CFM90_17460 IPR013356 Type II secretion system GspD CFM90_17460 IPR004846 Type II/III secretion system CFM90_17460 IPR004845 Type II secretion system GspD, conserved site CFM90_17460 IPR005644 NolW-like CFM90_17485 IPR010055 Type II secretion system protein J CFM90_17485 IPR012902 Prokaryotic N-terminal methylation site CFM90_17490 IPR003413 Type II secretion system protein I domain CFM90_17490 IPR012902 Prokaryotic N-terminal methylation site CFM90_17490 IPR010052 Type II secretion system protein I CFM90_17495 IPR012902 Prokaryotic N-terminal methylation site CFM90_17495 IPR022346 General secretion pathway, GspH CFM90_17495 IPR002416 Type II secretion system protein H CFM90_17500 IPR010054 General secretion pathway protein G CFM90_17500 IPR000983 Bacterial general secretion pathway protein G-type pilin CFM90_17500 IPR013545 Type II secretion system protein G CFM90_17500 IPR012902 Prokaryotic N-terminal methylation site CFM90_17515 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal CFM90_17515 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal CFM90_17515 IPR005956 4-hydroxyphenylpyruvate dioxygenase CFM90_17515 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CFM90_17515 IPR037523 Vicinal oxygen chelate (VOC) domain CFM90_17515 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CFM90_17520 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_17520 IPR036390 Winged helix DNA-binding domain superfamily CFM90_17520 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_17520 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_17520 IPR011991 ArsR-like helix-turn-helix domain CFM90_17520 IPR000485 AsnC-type HTH domain CFM90_17520 IPR019888 Transcription regulator AsnC-type CFM90_17520 IPR011008 Dimeric alpha-beta barrel CFM90_17530 IPR015500 Peptidase S8, subtilisin-related CFM90_17530 IPR022398 Peptidase S8, subtilisin, His-active site CFM90_17530 IPR036852 Peptidase S8/S53 domain superfamily CFM90_17530 IPR000209 Peptidase S8/S53 domain CFM90_17530 IPR034061 Autotransporter serine protease peptidase domain CFM90_17530 IPR036709 Autotransporter beta-domain superfamily CFM90_17530 IPR013425 Autotransporter-associated beta strand repeat CFM90_17530 IPR023828 Peptidase S8, subtilisin, Ser-active site CFM90_17530 IPR011050 Pectin lyase fold/virulence factor CFM90_17530 IPR005546 Autotransporter beta-domain CFM90_17530 IPR006315 Outer membrane autotransporter barrel CFM90_17550 IPR003680 Flavodoxin-like fold CFM90_17550 IPR029039 Flavoprotein-like superfamily CFM90_17550 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF CFM90_17555 IPR003148 Regulator of K+ conductance, N-terminal CFM90_17555 IPR006036 Potassium uptake protein TrkA CFM90_17555 IPR038770 Sodium/solute symporter superfamily CFM90_17555 IPR006153 Cation/H+ exchanger CFM90_17555 IPR004771 K+/H+ exchanger CFM90_17555 IPR023941 Glutathione-regulated potassium-efflux system protein KefC CFM90_17555 IPR036291 NAD(P)-binding domain superfamily CFM90_17570 IPR002933 Peptidase M20 CFM90_17570 IPR017150 Peptidase M20, glutamate carboxypeptidase CFM90_17570 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_17570 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CFM90_17570 IPR011650 Peptidase M20, dimerisation domain CFM90_17580 IPR002299 Porin, Neisseria sp. type CFM90_17580 IPR001702 Porin, Gram-negative type CFM90_17580 IPR023614 Porin domain superfamily CFM90_17580 IPR033900 Porin domain, Gram-negative type CFM90_17585 IPR042100 Bordetella uptake gene, domain 1 CFM90_17585 IPR005064 Bordetella uptake gene CFM90_17590 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_17590 IPR039420 Transcriptional regulatory protein WalR-like CFM90_17590 IPR001789 Signal transduction response regulator, receiver domain CFM90_17590 IPR011006 CheY-like superfamily CFM90_17590 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_17595 IPR036369 High potential iron-sulphur protein superfamily CFM90_17595 IPR000170 High potential iron-sulphur protein CFM90_17595 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_17650 IPR030935 Phage portal protein PBSX family, Proteobacteria CFM90_17650 IPR006430 Phage portal protein PBSX family CFM90_17745 IPR037053 Phage tail collar domain superfamily CFM90_17745 IPR011083 Phage tail collar domain CFM90_17800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_17800 IPR001091 Restriction/modification DNA-methylase CFM90_17800 IPR002941 DNA methylase N-4/N-6 CFM90_17890 IPR011010 DNA breaking-rejoining enzyme, catalytic core CFM90_17890 IPR002104 Integrase, catalytic domain CFM90_17890 IPR010998 Integrase/recombinase, N-terminal CFM90_17890 IPR013762 Integrase-like, catalytic domain superfamily CFM90_17900 IPR002323 Cytochrome c, class IE CFM90_17900 IPR009056 Cytochrome c-like domain CFM90_17900 IPR036909 Cytochrome c-like domain superfamily CFM90_17935 IPR005467 Histidine kinase domain CFM90_17935 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal CFM90_17935 IPR038388 RcsC, C-terminal domain superfamily CFM90_17935 IPR030856 Sensor histidine kinase RcsC CFM90_17935 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_17935 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_17935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_17935 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_17935 IPR011006 CheY-like superfamily CFM90_17935 IPR001789 Signal transduction response regulator, receiver domain CFM90_17935 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_17940 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_17940 IPR030864 Transcriptional regulatory protein RcsB CFM90_17940 IPR011006 CheY-like superfamily CFM90_17940 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_17940 IPR000792 Transcription regulator LuxR, C-terminal CFM90_17940 IPR001789 Signal transduction response regulator, receiver domain CFM90_17945 IPR023783 Cation efflux pump FieF CFM90_17945 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CFM90_17945 IPR027470 Cation efflux protein, cytoplasmic domain CFM90_17945 IPR002524 Cation efflux protein CFM90_17945 IPR027469 Cation efflux transmembrane domain superfamily CFM90_17980 IPR011701 Major facilitator superfamily CFM90_17980 IPR020846 Major facilitator superfamily domain CFM90_17980 IPR036259 MFS transporter superfamily CFM90_17985 IPR023408 Mechanosensitive ion channel MscS domain superfamily CFM90_17985 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CFM90_17985 IPR011066 Mechanosensitive ion channel MscS, C-terminal CFM90_17985 IPR006685 Mechanosensitive ion channel MscS CFM90_17985 IPR010920 LSM domain superfamily CFM90_18000 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_18000 IPR039420 Transcriptional regulatory protein WalR-like CFM90_18000 IPR001789 Signal transduction response regulator, receiver domain CFM90_18000 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_18000 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_18000 IPR011006 CheY-like superfamily CFM90_18005 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_18005 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_18005 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_18005 IPR005467 Histidine kinase domain CFM90_18005 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_18005 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_18005 IPR003660 HAMP domain CFM90_18020 IPR005829 Sugar transporter, conserved site CFM90_18020 IPR011701 Major facilitator superfamily CFM90_18020 IPR020846 Major facilitator superfamily domain CFM90_18020 IPR036259 MFS transporter superfamily CFM90_18020 IPR004736 MFS transporter, metabolite:H symporter CFM90_18025 IPR036259 MFS transporter superfamily CFM90_18025 IPR005829 Sugar transporter, conserved site CFM90_18025 IPR020846 Major facilitator superfamily domain CFM90_18025 IPR011701 Major facilitator superfamily CFM90_18025 IPR004736 MFS transporter, metabolite:H symporter CFM90_18035 IPR014756 Immunoglobulin E-set CFM90_18035 IPR023724 Glucan biosynthesis, MdoD CFM90_18035 IPR011013 Galactose mutarotase-like domain superfamily CFM90_18035 IPR014718 Glycoside hydrolase-type carbohydrate-binding CFM90_18035 IPR014438 Glucan biosynthesis protein MdoG/MdoD CFM90_18035 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_18035 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal CFM90_18035 IPR013783 Immunoglobulin-like fold CFM90_18040 IPR007159 SpoVT-AbrB domain CFM90_18040 IPR037914 SpoVT-AbrB domain superfamily CFM90_18040 IPR039052 Antitoxin PemI-like CFM90_18060 IPR018483 Carbohydrate kinase, FGGY, conserved site CFM90_18060 IPR018484 Carbohydrate kinase, FGGY, N-terminal CFM90_18060 IPR005999 Glycerol kinase CFM90_18060 IPR018485 Carbohydrate kinase, FGGY, C-terminal CFM90_18060 IPR000577 Carbohydrate kinase, FGGY CFM90_18075 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_18075 IPR035906 MetI-like superfamily CFM90_18080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_18080 IPR035906 MetI-like superfamily CFM90_18085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_18085 IPR003439 ABC transporter-like CFM90_18085 IPR040582 MalK, OB fold domain CFM90_18085 IPR003593 AAA+ ATPase domain CFM90_18085 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_18085 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC CFM90_18085 IPR017871 ABC transporter, conserved site CFM90_18090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_18090 IPR040582 MalK, OB fold domain CFM90_18090 IPR003593 AAA+ ATPase domain CFM90_18090 IPR017871 ABC transporter, conserved site CFM90_18090 IPR003439 ABC transporter-like CFM90_18090 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_18090 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC CFM90_18095 IPR031656 Alpha-glycerophosphate oxidase, C-terminal CFM90_18095 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CFM90_18095 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_18095 IPR006076 FAD dependent oxidoreductase CFM90_18095 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily CFM90_18100 IPR036390 Winged helix DNA-binding domain superfamily CFM90_18100 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_18100 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CFM90_18100 IPR037171 NagB/RpiA transferase-like CFM90_18100 IPR001034 DeoR-type HTH domain CFM90_18100 IPR014036 DeoR C-terminal sensor domain CFM90_18110 IPR007428 MlaA lipoprotein CFM90_18140 IPR025296 Domain of unknown function DUF4158 CFM90_18140 IPR002513 Tn3 transposase DDE domain CFM90_18155 IPR002068 Alpha crystallin/Hsp20 domain CFM90_18155 IPR031107 Small heat shock protein HSP20 CFM90_18155 IPR008978 HSP20-like chaperone CFM90_18160 IPR031107 Small heat shock protein HSP20 CFM90_18160 IPR008978 HSP20-like chaperone CFM90_18160 IPR002068 Alpha crystallin/Hsp20 domain CFM90_18170 IPR013126 Heat shock protein 70 family CFM90_18170 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CFM90_18170 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CFM90_18170 IPR018181 Heat shock protein 70, conserved site CFM90_18170 IPR012725 Chaperone DnaK CFM90_18190 IPR001765 Carbonic anhydrase CFM90_18190 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CFM90_18190 IPR036874 Carbonic anhydrase superfamily CFM90_18200 IPR020818 GroES chaperonin family CFM90_18200 IPR037124 GroES chaperonin superfamily CFM90_18200 IPR011032 GroES-like superfamily CFM90_18200 IPR018369 Chaperonin GroES, conserved site CFM90_18205 IPR002423 Chaperonin Cpn60/TCP-1 family CFM90_18205 IPR018370 Chaperonin Cpn60, conserved site CFM90_18205 IPR001844 Chaperonin Cpn60 CFM90_18205 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CFM90_18205 IPR027413 GroEL-like equatorial domain superfamily CFM90_18205 IPR027409 GroEL-like apical domain superfamily CFM90_18215 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily CFM90_18215 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CFM90_18215 IPR002081 Cryptochrome/DNA photolyase class 1 CFM90_18215 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CFM90_18215 IPR006050 DNA photolyase, N-terminal CFM90_18215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_18215 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily CFM90_18225 IPR023664 Murein transglycosylase-C CFM90_18225 IPR024570 Murein transglycosylase-C, N-terminal CFM90_18225 IPR008258 Transglycosylase SLT domain 1 CFM90_18225 IPR000189 Prokaryotic transglycosylase, active site CFM90_18225 IPR023346 Lysozyme-like domain superfamily CFM90_18240 IPR036397 Ribonuclease H superfamily CFM90_18240 IPR012337 Ribonuclease H-like superfamily CFM90_18240 IPR001584 Integrase, catalytic core CFM90_18240 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type CFM90_18245 IPR003593 AAA+ ATPase domain CFM90_18245 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CFM90_18245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_18245 IPR002611 IstB-like ATP-binding protein CFM90_18250 IPR005083 Serine/Threonine acetyltransferase, YopJ CFM90_18255 IPR025296 Domain of unknown function DUF4158 CFM90_18255 IPR002513 Tn3 transposase DDE domain CFM90_18260 IPR009057 Homeobox-like domain superfamily CFM90_18260 IPR006119 Resolvase, N-terminal catalytic domain CFM90_18260 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CFM90_18260 IPR006120 Resolvase, HTH domain CFM90_18260 IPR006118 Recombinase, conserved site CFM90_18270 IPR005083 Serine/Threonine acetyltransferase, YopJ CFM90_18275 IPR036291 NAD(P)-binding domain superfamily CFM90_18275 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_18285 IPR013570 Transcription regulator YsiA, C-terminal CFM90_18285 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CFM90_18285 IPR009057 Homeobox-like domain superfamily CFM90_18285 IPR001647 DNA-binding HTH domain, TetR-type CFM90_18300 IPR036291 NAD(P)-binding domain superfamily CFM90_18300 IPR000683 Oxidoreductase, N-terminal CFM90_18305 IPR036390 Winged helix DNA-binding domain superfamily CFM90_18305 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_18305 IPR000847 Transcription regulator HTH, LysR CFM90_18305 IPR005119 LysR, substrate-binding CFM90_18310 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_18310 IPR002938 FAD-binding domain CFM90_18315 IPR000847 Transcription regulator HTH, LysR CFM90_18315 IPR005119 LysR, substrate-binding CFM90_18315 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_18315 IPR036390 Winged helix DNA-binding domain superfamily CFM90_18335 IPR023009 Tyrosine recombinase XerC/XerD CFM90_18335 IPR004107 Integrase, SAM-like, N-terminal CFM90_18335 IPR010998 Integrase/recombinase, N-terminal CFM90_18335 IPR011010 DNA breaking-rejoining enzyme, catalytic core CFM90_18335 IPR013762 Integrase-like, catalytic domain superfamily CFM90_18335 IPR002104 Integrase, catalytic domain CFM90_18350 IPR003346 Transposase, IS116/IS110/IS902 CFM90_18350 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CFM90_18360 IPR004809 Glutamine synthetase type I CFM90_18360 IPR001637 Glutamine synthetase class-I, adenylation site CFM90_18360 IPR027302 Glutamine synthetase, N-terminal conserved site CFM90_18360 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CFM90_18360 IPR036651 Glutamine synthetase, N-terminal domain superfamily CFM90_18360 IPR008147 Glutamine synthetase, beta-Grasp domain CFM90_18360 IPR008146 Glutamine synthetase, catalytic domain CFM90_18360 IPR027303 Glutamine synthetase, glycine-rich site CFM90_18370 IPR002543 FtsK domain CFM90_18370 IPR036390 Winged helix DNA-binding domain superfamily CFM90_18370 IPR018541 FtsK gamma domain CFM90_18370 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_18370 IPR003593 AAA+ ATPase domain CFM90_18370 IPR025199 DNA translocase FtsK, 4TM region CFM90_18370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_18370 IPR041027 FtsK alpha domain CFM90_18390 IPR011050 Pectin lyase fold/virulence factor CFM90_18390 IPR012334 Pectin lyase fold CFM90_18390 IPR000743 Glycoside hydrolase, family 28 CFM90_18425 IPR018062 HTH domain AraC-type, conserved site CFM90_18425 IPR018060 DNA binding HTH domain, AraC-type CFM90_18440 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CFM90_18440 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CFM90_18440 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CFM90_18440 IPR003593 AAA+ ATPase domain CFM90_18440 IPR040627 T3SS EscN ATPase, C-terminal CFM90_18440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_18440 IPR013380 ATPase, type III secretion system, H+-transporting CFM90_18440 IPR005714 ATPase, type III secretion system, FliI/YscN CFM90_18455 IPR006182 Secretory protein YscJ/FliF CFM90_18455 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ CFM90_18470 IPR029025 Type III secretion system substrate exporter, C-terminal CFM90_18470 IPR006135 Type III secretion system substrate exporter CFM90_18470 IPR006307 Type III exporter system, secretion apparatus protein BsaZ CFM90_18475 IPR006302 Type III secretion protein HrcV CFM90_18475 IPR001712 Type III secretion system FHIPEP CFM90_18475 IPR025505 FHIPEP conserved site CFM90_18475 IPR042193 FHIPEP, domain 3 CFM90_18475 IPR042194 FHIPEP, domain 1 CFM90_18475 IPR042196 FHIPEP, domain 4 CFM90_18480 IPR013390 Type III secretion protein HpaP CFM90_18490 IPR005773 Yop virulence translocation protein R CFM90_18490 IPR005838 Type III secretion system inner membrane P protein CFM90_18495 IPR006305 Flagellar biosynthesis protein FliQ CFM90_18495 IPR002191 Bacterial export protein family 3 CFM90_18530 IPR039420 Transcriptional regulatory protein WalR-like CFM90_18530 IPR001789 Signal transduction response regulator, receiver domain CFM90_18530 IPR011006 CheY-like superfamily CFM90_18530 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_18530 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_18535 IPR000792 Transcription regulator LuxR, C-terminal CFM90_18535 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_18535 IPR011006 CheY-like superfamily CFM90_18535 IPR001789 Signal transduction response regulator, receiver domain CFM90_18545 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CFM90_18545 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CFM90_18545 IPR007627 RNA polymerase sigma-70 region 2 CFM90_18545 IPR013325 RNA polymerase sigma factor, region 2 CFM90_18545 IPR014284 RNA polymerase sigma-70 like domain CFM90_18545 IPR039425 RNA polymerase sigma-70 like CFM90_18545 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_18545 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_18590 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_18590 IPR000189 Prokaryotic transglycosylase, active site CFM90_18590 IPR008258 Transglycosylase SLT domain 1 CFM90_18590 IPR023346 Lysozyme-like domain superfamily CFM90_18590 IPR023703 Membrane-bound lytic murein transglycosylase F CFM90_18595 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_18595 IPR003660 HAMP domain CFM90_18595 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_18595 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_18595 IPR004090 Chemotaxis methyl-accepting receptor CFM90_18595 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_18620 IPR015797 NUDIX hydrolase-like domain superfamily CFM90_18620 IPR000086 NUDIX hydrolase domain CFM90_18620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_18620 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain CFM90_18620 IPR004821 Cytidyltransferase-like domain CFM90_18620 IPR020084 NUDIX hydrolase, conserved site CFM90_18625 IPR020846 Major facilitator superfamily domain CFM90_18625 IPR036259 MFS transporter superfamily CFM90_18625 IPR011701 Major facilitator superfamily CFM90_18630 IPR000743 Glycoside hydrolase, family 28 CFM90_18630 IPR006626 Parallel beta-helix repeat CFM90_18630 IPR012334 Pectin lyase fold CFM90_18630 IPR011050 Pectin lyase fold/virulence factor CFM90_18635 IPR005511 Senescence marker protein-30 (SMP-30) CFM90_18635 IPR013658 SMP-30/Gluconolactonase/LRE-like region CFM90_18635 IPR011042 Six-bladed beta-propeller, TolB-like CFM90_18640 IPR036291 NAD(P)-binding domain superfamily CFM90_18640 IPR001509 NAD-dependent epimerase/dehydratase CFM90_18645 IPR013974 SAF domain CFM90_18645 IPR017654 Galactarate dehydratase GarD-like CFM90_18645 IPR007392 D-galactarate/Altronate dehydratase, C-terminal CFM90_18650 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CFM90_18650 IPR034593 Mandelate racemase-like CFM90_18650 IPR029017 Enolase-like, N-terminal CFM90_18650 IPR029065 Enolase C-terminal domain-like CFM90_18650 IPR017653 Glucarate dehydratase CFM90_18650 IPR034598 D-Glucarate dehydratase-like CFM90_18650 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CFM90_18650 IPR036849 Enolase-like, C-terminal domain superfamily CFM90_18655 IPR036259 MFS transporter superfamily CFM90_18655 IPR000849 Sugar phosphate transporter CFM90_18655 IPR011701 Major facilitator superfamily CFM90_18655 IPR020846 Major facilitator superfamily domain CFM90_18660 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_18660 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_18660 IPR015590 Aldehyde dehydrogenase domain CFM90_18660 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_18665 IPR013785 Aldolase-type TIM barrel CFM90_18665 IPR002220 DapA-like CFM90_18665 IPR017655 5-dehydro-4-deoxyglucarate dehydratase CFM90_18670 IPR001045 Spermidine/spermine synthases CFM90_18670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_18670 IPR030374 Polyamine biosynthesis domain CFM90_18680 IPR000847 Transcription regulator HTH, LysR CFM90_18680 IPR005119 LysR, substrate-binding CFM90_18680 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain CFM90_18680 IPR036390 Winged helix DNA-binding domain superfamily CFM90_18680 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_18690 IPR004779 Carboxylate/Amino Acid/Amine Transporter CFM90_18690 IPR000620 EamA domain CFM90_18700 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFM90_18700 IPR006143 RND efflux pump, membrane fusion protein CFM90_18705 IPR001036 Acriflavin resistance protein CFM90_18705 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_18705 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CFM90_18710 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_18710 IPR003423 Outer membrane efflux protein CFM90_18715 IPR009057 Homeobox-like domain superfamily CFM90_18715 IPR001647 DNA-binding HTH domain, TetR-type CFM90_18715 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CFM90_18715 IPR041603 YvdT, C-terminal CFM90_18725 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_18725 IPR006231 Malate:quinone-oxidoreductase CFM90_18730 IPR001633 EAL domain CFM90_18730 IPR035919 EAL domain superfamily CFM90_18730 IPR005330 MHYT domain CFM90_18730 IPR029787 Nucleotide cyclase CFM90_18730 IPR000160 GGDEF domain CFM90_18740 IPR039426 Vitamin B12 transporter BtuB-like CFM90_18740 IPR010101 TonB-dependent vitamin B12 transporter BtuB CFM90_18740 IPR037066 TonB-dependent receptor, plug domain superfamily CFM90_18740 IPR000531 TonB-dependent receptor-like, beta-barrel CFM90_18740 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFM90_18740 IPR010917 TonB-dependent receptor, conserved site CFM90_18740 IPR012910 TonB-dependent receptor, plug domain CFM90_18745 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CFM90_18745 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CFM90_18745 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CFM90_18745 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CFM90_18745 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CFM90_18760 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_18760 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFM90_18760 IPR000813 7Fe ferredoxin CFM90_18760 IPR022569 Ferredoxin, C-terminal CFM90_18775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_18775 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_18775 IPR004540 Translation elongation factor EFG/EF2 CFM90_18775 IPR005517 Translation elongation factor EFG/EF2, domain IV CFM90_18775 IPR020568 Ribosomal protein S5 domain 2-type fold CFM90_18775 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFM90_18775 IPR005225 Small GTP-binding protein domain CFM90_18775 IPR000795 Transcription factor, GTP-binding domain CFM90_18775 IPR031157 Tr-type G domain, conserved site CFM90_18775 IPR035649 EFG, domain V CFM90_18775 IPR004161 Translation elongation factor EFTu-like, domain 2 CFM90_18775 IPR009022 Elongation factor G, domain III CFM90_18775 IPR041095 Elongation Factor G, domain II CFM90_18775 IPR035647 EF-G domain III/V-like CFM90_18775 IPR000640 Elongation factor EFG, domain V-like CFM90_18785 IPR004680 Citrate transporter-like domain CFM90_18790 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_18790 IPR001387 Cro/C1-type helix-turn-helix domain CFM90_18795 IPR004013 PHP domain CFM90_18795 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CFM90_18795 IPR016195 Polymerase/histidinol phosphatase-like CFM90_18795 IPR004805 DNA polymerase III, alpha subunit CFM90_18795 IPR040982 DNA polymerase III alpha subunit finger domain CFM90_18795 IPR029460 DNA polymerase, helix-hairpin-helix motif CFM90_18795 IPR003141 Polymerase/histidinol phosphatase, N-terminal CFM90_18795 IPR023073 DNA polymerase, error-prone CFM90_18810 IPR011701 Major facilitator superfamily CFM90_18810 IPR020846 Major facilitator superfamily domain CFM90_18810 IPR005829 Sugar transporter, conserved site CFM90_18810 IPR036259 MFS transporter superfamily CFM90_18815 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CFM90_18815 IPR001647 DNA-binding HTH domain, TetR-type CFM90_18815 IPR009057 Homeobox-like domain superfamily CFM90_18825 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type CFM90_18825 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_18825 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_18825 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CFM90_18825 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 CFM90_18825 IPR004839 Aminotransferase, class I/classII CFM90_18825 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_18840 IPR020807 Polyketide synthase, dehydratase domain CFM90_18840 IPR000873 AMP-dependent synthetase/ligase CFM90_18840 IPR020845 AMP-binding, conserved site CFM90_18840 IPR032821 Ketoacyl-synthetase, C-terminal extension CFM90_18840 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_18840 IPR036736 ACP-like superfamily CFM90_18840 IPR010071 Amino acid adenylation domain CFM90_18840 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFM90_18840 IPR042099 AMP-dependent synthetase-like superfamily CFM90_18840 IPR006162 Phosphopantetheine attachment site CFM90_18840 IPR014031 Beta-ketoacyl synthase, C-terminal CFM90_18840 IPR016039 Thiolase-like CFM90_18840 IPR036291 NAD(P)-binding domain superfamily CFM90_18840 IPR042104 Polyketide synthase, dehydratase domain superfamily CFM90_18840 IPR013968 Polyketide synthase, ketoreductase domain CFM90_18840 IPR009081 Phosphopantetheine binding ACP domain CFM90_18840 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CFM90_18840 IPR018201 Beta-ketoacyl synthase, active site CFM90_18840 IPR001242 Condensation domain CFM90_18840 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CFM90_18840 IPR014030 Beta-ketoacyl synthase, N-terminal CFM90_18855 IPR031730 Carbamoyltransferase, C-terminal CFM90_18855 IPR038152 Carbamoyltransferase, C-terminal domain superfamily CFM90_18855 IPR003696 Carbamoyltransferase CFM90_18860 IPR042099 AMP-dependent synthetase-like superfamily CFM90_18860 IPR000873 AMP-dependent synthetase/ligase CFM90_18885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_18885 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CFM90_18885 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFM90_18885 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CFM90_18885 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CFM90_18885 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CFM90_18885 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CFM90_18885 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CFM90_18885 IPR002303 Valine-tRNA ligase CFM90_18885 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFM90_18885 IPR002300 Aminoacyl-tRNA synthetase, class Ia CFM90_18900 IPR016181 Acyl-CoA N-acyltransferase CFM90_18900 IPR001690 Autoinducer synthase CFM90_18905 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CFM90_18905 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_18905 IPR000792 Transcription regulator LuxR, C-terminal CFM90_18905 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_18905 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CFM90_18980 IPR007055 BON domain CFM90_18980 IPR006664 Outer membrane protein, bacterial CFM90_18980 IPR006665 OmpA-like domain CFM90_18980 IPR006690 Outer membrane protein, OmpA-like, conserved site CFM90_18980 IPR036737 OmpA-like domain superfamily CFM90_19035 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CFM90_19035 IPR006531 Gp5 N-terminal CFM90_19035 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CFM90_19035 IPR037026 Vgr protein, OB-fold domain superfamily CFM90_19040 IPR041546 ClpA/ClpB, AAA lid domain CFM90_19040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_19040 IPR018368 ClpA/B, conserved site 1 CFM90_19040 IPR017729 Type VI secretion system, ATPase ClpV1 CFM90_19040 IPR003959 ATPase, AAA-type, core CFM90_19040 IPR003593 AAA+ ATPase domain CFM90_19040 IPR036628 Clp, N-terminal domain superfamily CFM90_19040 IPR019489 Clp ATPase, C-terminal CFM90_19040 IPR004176 Clp, N-terminal CFM90_19040 IPR001270 ClpA/B family CFM90_19125 IPR012766 Alpha,alpha-trehalose-phosphate synthase CFM90_19125 IPR001830 Glycosyl transferase, family 20 CFM90_19145 IPR020626 L-aspartate dehydrogenase, prokaryotic CFM90_19145 IPR036291 NAD(P)-binding domain superfamily CFM90_19145 IPR011182 L-aspartate dehydrogenase CFM90_19145 IPR002811 Aspartate dehydrogenase CFM90_19145 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CFM90_19175 IPR036909 Cytochrome c-like domain superfamily CFM90_19175 IPR004852 Di-haem cytochrome c peroxidase CFM90_19175 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CFM90_19175 IPR009056 Cytochrome c-like domain CFM90_19190 IPR018300 Aminotransferase, class IV, conserved site CFM90_19190 IPR001544 Aminotransferase class IV CFM90_19190 IPR036038 Aminotransferase-like, PLP-dependent enzymes CFM90_19190 IPR005784 D-amino acid aminotransferase CFM90_19210 IPR000620 EamA domain CFM90_19215 IPR036396 Cytochrome P450 superfamily CFM90_19215 IPR001128 Cytochrome P450 CFM90_19215 IPR017972 Cytochrome P450, conserved site CFM90_19215 IPR002397 Cytochrome P450, B-class CFM90_19225 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CFM90_19225 IPR003439 ABC transporter-like CFM90_19225 IPR017871 ABC transporter, conserved site CFM90_19225 IPR003593 AAA+ ATPase domain CFM90_19225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_19230 IPR003439 ABC transporter-like CFM90_19230 IPR017871 ABC transporter, conserved site CFM90_19230 IPR003593 AAA+ ATPase domain CFM90_19230 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFM90_19230 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_19250 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_19250 IPR002938 FAD-binding domain CFM90_19250 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase CFM90_19260 IPR036025 tRNA-splicing ligase RtcB-like superfamily CFM90_19265 IPR017509 Putative peptide chain release factor H CFM90_19265 IPR000352 Peptide chain release factor class I CFM90_19270 IPR004839 Aminotransferase, class I/classII CFM90_19270 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_19270 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_19270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_19270 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CFM90_19275 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_19275 IPR036291 NAD(P)-binding domain superfamily CFM90_19275 IPR011283 Acetoacetyl-CoA reductase CFM90_19275 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_19290 IPR004981 Tryptophan 2,3-dioxygenase CFM90_19290 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like CFM90_19300 IPR036390 Winged helix DNA-binding domain superfamily CFM90_19300 IPR005119 LysR, substrate-binding CFM90_19300 IPR000847 Transcription regulator HTH, LysR CFM90_19300 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_19305 IPR005708 Homogentisate 1,2-dioxygenase CFM90_19305 IPR022950 Homogentisate 1,2-dioxygenase, bacterial CFM90_19305 IPR014710 RmlC-like jelly roll fold CFM90_19305 IPR011051 RmlC-like cupin domain superfamily CFM90_19325 IPR006089 Acyl-CoA dehydrogenase, conserved site CFM90_19325 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_19325 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_19325 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_19325 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_19325 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_19325 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_19345 IPR029066 PLP-binding barrel CFM90_19345 IPR001608 Alanine racemase, N-terminal CFM90_19345 IPR011078 Pyridoxal phosphate homeostasis protein CFM90_19350 IPR002559 Transposase, IS4-like CFM90_19350 IPR008490 Transposase InsH, N-terminal CFM90_19355 IPR037348 Trimethylamine dehydrogenase/Dimethylamine dehydrogenase, FMN-binding domain CFM90_19355 IPR023753 FAD/NAD(P)-binding domain CFM90_19355 IPR013785 Aldolase-type TIM barrel CFM90_19355 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_19355 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CFM90_19360 IPR005940 Anthranilate phosphoribosyl transferase CFM90_19360 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CFM90_19360 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CFM90_19360 IPR017459 Glycosyl transferase family 3, N-terminal domain CFM90_19360 IPR000312 Glycosyl transferase, family 3 CFM90_19365 IPR011060 Ribulose-phosphate binding barrel CFM90_19365 IPR013785 Aldolase-type TIM barrel CFM90_19365 IPR013798 Indole-3-glycerol phosphate synthase CFM90_19365 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CFM90_19370 IPR002986 Diaminopimelate decarboxylase, LysA CFM90_19370 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CFM90_19370 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CFM90_19370 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CFM90_19370 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CFM90_19370 IPR000183 Ornithine/DAP/Arg decarboxylase CFM90_19370 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CFM90_19370 IPR029066 PLP-binding barrel CFM90_19375 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CFM90_19375 IPR000659 Pyridoxamine 5'-phosphate oxidase CFM90_19375 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CFM90_19375 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CFM90_19375 IPR012349 FMN-binding split barrel CFM90_19380 IPR005119 LysR, substrate-binding CFM90_19380 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain CFM90_19380 IPR000847 Transcription regulator HTH, LysR CFM90_19380 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_19380 IPR036390 Winged helix DNA-binding domain superfamily CFM90_19385 IPR006276 Cobalamin-independent methionine synthase CFM90_19385 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CFM90_19385 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CFM90_19385 IPR038071 UROD/MetE-like superfamily CFM90_19390 IPR008517 Protein of unknown function DUF799 CFM90_19400 IPR005534 Curli production assembly/transport component CsgG CFM90_19410 IPR029045 ClpP/crotonase-like domain superfamily CFM90_19410 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CFM90_19410 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_19410 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_19415 IPR001036 Acriflavin resistance protein CFM90_19415 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_19425 IPR003423 Outer membrane efflux protein CFM90_19425 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_19435 IPR011701 Major facilitator superfamily CFM90_19435 IPR004747 Cyanate transport system protein CFM90_19435 IPR036259 MFS transporter superfamily CFM90_19435 IPR020846 Major facilitator superfamily domain CFM90_19440 IPR011257 DNA glycosylase CFM90_19440 IPR005019 Methyladenine glycosylase CFM90_19440 IPR004597 DNA-3-methyladenine glycosylase I CFM90_19445 IPR004488 Magnesium/cobalt transport protein CorA CFM90_19445 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CFM90_19450 IPR036390 Winged helix DNA-binding domain superfamily CFM90_19450 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_19450 IPR000835 MarR-type HTH domain CFM90_19450 IPR011991 ArsR-like helix-turn-helix domain CFM90_19455 IPR036259 MFS transporter superfamily CFM90_19455 IPR004638 Drug resistance transporter EmrB-like CFM90_19455 IPR011701 Major facilitator superfamily CFM90_19455 IPR020846 Major facilitator superfamily domain CFM90_19460 IPR000847 Transcription regulator HTH, LysR CFM90_19460 IPR005119 LysR, substrate-binding CFM90_19460 IPR036390 Winged helix DNA-binding domain superfamily CFM90_19460 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_19465 IPR036380 Isochorismatase-like superfamily CFM90_19465 IPR000868 Isochorismatase-like CFM90_19475 IPR008457 Copper resistance protein D CFM90_19475 IPR032694 Copper transport protein C/D CFM90_19480 IPR032694 Copper transport protein C/D CFM90_19480 IPR014756 Immunoglobulin E-set CFM90_19480 IPR007348 CopC domain CFM90_19485 IPR007939 Copper resistance B precursor CFM90_19490 IPR034279 Copper resistance protein, third cupredoxin domain CFM90_19490 IPR034282 Copper resistance protein CopA, second cupredoxin domain CFM90_19490 IPR001117 Multicopper oxidase, type 1 CFM90_19490 IPR011706 Multicopper oxidase, type 2 CFM90_19490 IPR011707 Multicopper oxidase, type 3 CFM90_19490 IPR034284 Copper resistance protein, first cupredoxin domain CFM90_19490 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CFM90_19490 IPR006376 Copper-resistance protein CopA CFM90_19490 IPR002355 Multicopper oxidase, copper-binding site CFM90_19490 IPR008972 Cupredoxin CFM90_19490 IPR033138 Multicopper oxidases, conserved site CFM90_19490 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_19495 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_19495 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_19495 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response CFM90_19495 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_19495 IPR011006 CheY-like superfamily CFM90_19495 IPR001789 Signal transduction response regulator, receiver domain CFM90_19495 IPR039420 Transcriptional regulatory protein WalR-like CFM90_19500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_19500 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_19500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_19500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_19500 IPR005467 Histidine kinase domain CFM90_19500 IPR006290 Heavy metal sensor kinase CFM90_19500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_19500 IPR003660 HAMP domain CFM90_19505 IPR020449 Transcription regulator HTH, AraC- type CFM90_19505 IPR018060 DNA binding HTH domain, AraC-type CFM90_19505 IPR009057 Homeobox-like domain superfamily CFM90_19505 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CFM90_19510 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_19510 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_19510 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_19510 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_19510 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_19510 IPR006089 Acyl-CoA dehydrogenase, conserved site CFM90_19510 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_19515 IPR042099 AMP-dependent synthetase-like superfamily CFM90_19515 IPR000873 AMP-dependent synthetase/ligase CFM90_19515 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_19515 IPR020845 AMP-binding, conserved site CFM90_19520 IPR010061 Methylmalonate-semialdehyde dehydrogenase CFM90_19520 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_19520 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_19520 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_19520 IPR015590 Aldehyde dehydrogenase domain CFM90_19520 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_19525 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_19525 IPR011548 3-hydroxyisobutyrate dehydrogenase CFM90_19525 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CFM90_19525 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CFM90_19525 IPR036291 NAD(P)-binding domain superfamily CFM90_19525 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CFM90_19525 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFM90_19525 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CFM90_19530 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_19530 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_19530 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CFM90_19530 IPR029045 ClpP/crotonase-like domain superfamily CFM90_19535 IPR029045 ClpP/crotonase-like domain superfamily CFM90_19535 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CFM90_19535 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_19535 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_19540 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_19540 IPR020601 1-aminocyclopropane-1-carboxylate deaminase, bacterial CFM90_19540 IPR005965 1-aminocyclopropane-1-carboxylate deaminase CFM90_19540 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CFM90_19540 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_19545 IPR000485 AsnC-type HTH domain CFM90_19545 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_19545 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_19545 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_19545 IPR019888 Transcription regulator AsnC-type CFM90_19545 IPR011008 Dimeric alpha-beta barrel CFM90_19545 IPR011991 ArsR-like helix-turn-helix domain CFM90_19545 IPR036390 Winged helix DNA-binding domain superfamily CFM90_19555 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_19555 IPR020845 AMP-binding, conserved site CFM90_19555 IPR006162 Phosphopantetheine attachment site CFM90_19555 IPR042099 AMP-dependent synthetase-like superfamily CFM90_19555 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CFM90_19555 IPR001242 Condensation domain CFM90_19555 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CFM90_19555 IPR009081 Phosphopantetheine binding ACP domain CFM90_19555 IPR036736 ACP-like superfamily CFM90_19555 IPR001031 Thioesterase CFM90_19555 IPR000873 AMP-dependent synthetase/ligase CFM90_19555 IPR029058 Alpha/Beta hydrolase fold CFM90_19555 IPR010071 Amino acid adenylation domain CFM90_19560 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CFM90_19560 IPR020845 AMP-binding, conserved site CFM90_19560 IPR000873 AMP-dependent synthetase/ligase CFM90_19560 IPR006162 Phosphopantetheine attachment site CFM90_19560 IPR010071 Amino acid adenylation domain CFM90_19560 IPR042099 AMP-dependent synthetase-like superfamily CFM90_19560 IPR036736 ACP-like superfamily CFM90_19560 IPR001242 Condensation domain CFM90_19560 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CFM90_19560 IPR009081 Phosphopantetheine binding ACP domain CFM90_19560 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_19560 IPR029058 Alpha/Beta hydrolase fold CFM90_19560 IPR001031 Thioesterase CFM90_19565 IPR005153 MbtH-like domain CFM90_19565 IPR038020 MbtH-like domain superfamily CFM90_19565 IPR037407 MbtH-like protein CFM90_19570 IPR041141 Diiron non-heme beta-hydroxylase, N-terminal domain CFM90_19570 IPR001279 Metallo-beta-lactamase CFM90_19570 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_19575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_19575 IPR003593 AAA+ ATPase domain CFM90_19575 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFM90_19575 IPR017871 ABC transporter, conserved site CFM90_19575 IPR003439 ABC transporter-like CFM90_19575 IPR011527 ABC transporter type 1, transmembrane domain CFM90_19575 IPR005898 Cyclic peptide transporter CFM90_19585 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_19585 IPR014284 RNA polymerase sigma-70 like domain CFM90_19585 IPR011990 Tetratricopeptide-like helical domain superfamily CFM90_19585 IPR013325 RNA polymerase sigma factor, region 2 CFM90_19585 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CFM90_19585 IPR007627 RNA polymerase sigma-70 region 2 CFM90_19585 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_19590 IPR002656 Acyltransferase 3 CFM90_19595 IPR002201 Glycosyl transferase, family 9 CFM90_19595 IPR011908 Lipopolysaccharide heptosyltransferase I CFM90_19625 IPR011541 Nickel/cobalt transporter, high-affinity CFM90_19625 IPR004688 Transition metal uptake transporter nickel/cobalt CFM90_19630 IPR036249 Thioredoxin-like superfamily CFM90_19635 IPR011953 Cobaltochelatase, CobN subunit CFM90_19635 IPR003672 CobN/magnesium chelatase CFM90_19640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_19640 IPR036465 von Willebrand factor A-like domain superfamily CFM90_19640 IPR011704 ATPase, dynein-related, AAA domain CFM90_19640 IPR041702 Magnesium-chelatase BchD/ChlD, VWA domain CFM90_19640 IPR041628 ChlI/MoxR, AAA lid domain CFM90_19640 IPR002035 von Willebrand factor, type A CFM90_19640 IPR003593 AAA+ ATPase domain CFM90_19645 IPR028281 Siroheme synthase, central domain CFM90_19645 IPR006366 Uroporphyrin-III C-methyltransferase CFM90_19645 IPR019478 Sirohaem synthase, dimerisation domain CFM90_19645 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CFM90_19645 IPR006367 Sirohaem synthase, N-terminal CFM90_19645 IPR035996 Tetrapyrrole methylase superfamily CFM90_19645 IPR012409 Sirohaem synthase CFM90_19645 IPR037115 Sirohaem synthase, dimerisation domain superfamily CFM90_19645 IPR036291 NAD(P)-binding domain superfamily CFM90_19645 IPR014777 Tetrapyrrole methylase, subdomain 1 CFM90_19645 IPR014776 Tetrapyrrole methylase, subdomain 2 CFM90_19645 IPR000878 Tetrapyrrole methylase CFM90_19650 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX CFM90_19655 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD CFM90_19655 IPR036074 CbiD superfamily CFM90_19660 IPR014777 Tetrapyrrole methylase, subdomain 1 CFM90_19660 IPR014776 Tetrapyrrole methylase, subdomain 2 CFM90_19660 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CFM90_19660 IPR006364 Precorrin-2 C(20)-methyltransferase domain CFM90_19660 IPR012382 Precorrin-2 C(20)-methyltransferase CFM90_19660 IPR000878 Tetrapyrrole methylase CFM90_19660 IPR035996 Tetrapyrrole methylase superfamily CFM90_19665 IPR014777 Tetrapyrrole methylase, subdomain 1 CFM90_19665 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase CFM90_19665 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CFM90_19665 IPR035996 Tetrapyrrole methylase superfamily CFM90_19665 IPR000878 Tetrapyrrole methylase CFM90_19665 IPR014776 Tetrapyrrole methylase, subdomain 2 CFM90_19670 IPR036518 CobE/GbiG C-terminal domain superfamily CFM90_19670 IPR002750 CobE/GbiG C-terminal domain CFM90_19675 IPR000878 Tetrapyrrole methylase CFM90_19675 IPR014777 Tetrapyrrole methylase, subdomain 1 CFM90_19675 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CFM90_19675 IPR014776 Tetrapyrrole methylase, subdomain 2 CFM90_19675 IPR035996 Tetrapyrrole methylase superfamily CFM90_19675 IPR006363 Precorrin-3B C17-methyltransferase domain CFM90_19675 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CFM90_19680 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW CFM90_19680 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CFM90_19680 IPR036627 CobW-like, C-terminal domain superfamily CFM90_19680 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CFM90_19680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_19685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_19685 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain CFM90_19685 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR CFM90_19690 IPR017929 CobB/CobQ glutamine amidotransferase CFM90_19690 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CFM90_19690 IPR011698 CobB/CobQ-like glutamine amidotransferase CFM90_19690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_19690 IPR029062 Class I glutamine amidotransferase-like CFM90_19690 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA CFM90_19695 IPR000415 Nitroreductase-like CFM90_19695 IPR012825 5,6-dimethylbenzimidazole synthase BluB CFM90_19695 IPR029479 Nitroreductase CFM90_19725 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_19725 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_19725 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CFM90_19725 IPR012675 Beta-grasp domain superfamily CFM90_19725 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CFM90_19725 IPR017938 Riboflavin synthase-like beta-barrel CFM90_19725 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit CFM90_19725 IPR001433 Oxidoreductase FAD/NAD(P)-binding CFM90_19725 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CFM90_19725 IPR017927 FAD-binding domain, ferredoxin reductase-type CFM90_19725 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CFM90_19730 IPR034904 Fe-S cluster assembly domain superfamily CFM90_19730 IPR002744 MIP18 family-like CFM90_19730 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit CFM90_19735 IPR012347 Ferritin-like CFM90_19735 IPR009078 Ferritin-like superfamily CFM90_19735 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C CFM90_19735 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C CFM90_19740 IPR038693 Phenylacetyl-CoA epoxidase, subunit B CFM90_19740 IPR009359 Phenylacetic acid degradation B CFM90_19745 IPR012347 Ferritin-like CFM90_19745 IPR009078 Ferritin-like superfamily CFM90_19745 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A CFM90_19745 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C CFM90_19750 IPR000209 Peptidase S8/S53 domain CFM90_19750 IPR036852 Peptidase S8/S53 domain superfamily CFM90_19750 IPR023827 Peptidase S8, subtilisin, Asp-active site CFM90_19750 IPR034202 Subtilisin Carlsberg-like catalytic domain CFM90_19750 IPR022398 Peptidase S8, subtilisin, His-active site CFM90_19750 IPR023828 Peptidase S8, subtilisin, Ser-active site CFM90_19750 IPR015500 Peptidase S8, subtilisin-related CFM90_19750 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily CFM90_19750 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 CFM90_19775 IPR001789 Signal transduction response regulator, receiver domain CFM90_19775 IPR011006 CheY-like superfamily CFM90_19775 IPR002545 CheW-like domain CFM90_19775 IPR036061 CheW-like domain superfamily CFM90_19775 IPR024181 Chemotaxis response regulator CheV CFM90_19785 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_19785 IPR001279 Metallo-beta-lactamase CFM90_19830 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CFM90_19830 IPR009057 Homeobox-like domain superfamily CFM90_19830 IPR018060 DNA binding HTH domain, AraC-type CFM90_19835 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_19835 IPR036291 NAD(P)-binding domain superfamily CFM90_19835 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_19860 IPR001919 Carbohydrate-binding type-2 domain CFM90_19860 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily CFM90_19860 IPR012291 CBM2, carbohydrate-binding domain superfamily CFM90_19860 IPR036434 1, 4-beta cellobiohydrolase superfamily CFM90_19860 IPR016288 1, 4-beta cellobiohydrolase CFM90_19860 IPR018366 Carbohydrate-binding type-2, conserved site CFM90_19860 IPR036116 Fibronectin type III superfamily CFM90_19860 IPR001524 Glycoside hydrolase, family 6, conserved site CFM90_19860 IPR013783 Immunoglobulin-like fold CFM90_19860 IPR003961 Fibronectin type III CFM90_19925 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CFM90_19925 IPR003346 Transposase, IS116/IS110/IS902 CFM90_19945 IPR013766 Thioredoxin domain CFM90_19945 IPR036249 Thioredoxin-like superfamily CFM90_19945 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CFM90_19970 IPR018634 Chromate resistance exported protein CFM90_19975 IPR003370 Chromate transporter CFM90_19975 IPR014047 Chromate transporter, long chain CFM90_19980 IPR018634 Chromate resistance exported protein CFM90_19985 IPR038390 Metal-sensitive transcriptional repressor superfamily CFM90_19985 IPR003735 Metal-sensitive transcriptional repressor CFM90_19990 IPR011541 Nickel/cobalt transporter, high-affinity CFM90_19995 IPR006680 Amidohydrolase-related CFM90_19995 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFM90_19995 IPR023512 Deaminase MtaD/DadD CFM90_19995 IPR032466 Metal-dependent hydrolase CFM90_20000 IPR013686 Polypeptide-transport-associated, ShlB-type CFM90_20000 IPR005565 Haemolysin activator HlyB, C-terminal CFM90_20000 IPR035251 ShlB, POTRA domain CFM90_20000 IPR027282 Two partner secretion pathway transporter CFM90_20000 IPR034746 POTRA domain CFM90_20035 IPR008619 Filamentous haemagglutinin repeat CFM90_20035 IPR012334 Pectin lyase fold CFM90_20035 IPR008638 Filamentous haemagglutinin, N-terminal CFM90_20035 IPR008619 Filamentous haemagglutinin repeat CFM90_20035 IPR024973 ESPR domain CFM90_20035 IPR033806 CDI toxin, Bp1026b-like CFM90_20035 IPR040559 tRNA nuclease CdiA, C-terminal CFM90_20035 IPR033806 CDI toxin, Bp1026b-like CFM90_20035 IPR011050 Pectin lyase fold/virulence factor CFM90_20035 IPR012334 Pectin lyase fold CFM90_20035 IPR040559 tRNA nuclease CdiA, C-terminal CFM90_20035 IPR025157 Hemagglutinin repeat CFM90_20035 IPR008638 Filamentous haemagglutinin, N-terminal CFM90_20035 IPR024973 ESPR domain CFM90_20035 IPR011050 Pectin lyase fold/virulence factor CFM90_20035 IPR025157 Hemagglutinin repeat CFM90_20050 IPR005829 Sugar transporter, conserved site CFM90_20050 IPR004736 MFS transporter, metabolite:H symporter CFM90_20050 IPR036259 MFS transporter superfamily CFM90_20050 IPR020846 Major facilitator superfamily domain CFM90_20050 IPR011701 Major facilitator superfamily CFM90_20055 IPR000847 Transcription regulator HTH, LysR CFM90_20055 IPR036390 Winged helix DNA-binding domain superfamily CFM90_20055 IPR005119 LysR, substrate-binding CFM90_20055 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_20060 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CFM90_20060 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CFM90_20060 IPR029052 Metallo-dependent phosphatase-like CFM90_20070 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CFM90_20070 IPR024571 ERAP1-like C-terminal domain CFM90_20070 IPR042097 Aminopeptidase N-like , N-terminal CFM90_20070 IPR014782 Peptidase M1, membrane alanine aminopeptidase CFM90_20070 IPR034016 Aminopeptidase N-type CFM90_20080 IPR001036 Acriflavin resistance protein CFM90_20080 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_20080 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CFM90_20085 IPR006143 RND efflux pump, membrane fusion protein CFM90_20085 IPR022824 Multidrug resistance protein MdtA CFM90_20085 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CFM90_20095 IPR002559 Transposase, IS4-like CFM90_20095 IPR008490 Transposase InsH, N-terminal CFM90_20110 IPR036291 NAD(P)-binding domain superfamily CFM90_20110 IPR016040 NAD(P)-binding domain CFM90_20115 IPR005467 Histidine kinase domain CFM90_20115 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_20115 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_20115 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_20115 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_20115 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_20120 IPR001789 Signal transduction response regulator, receiver domain CFM90_20120 IPR039420 Transcriptional regulatory protein WalR-like CFM90_20120 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_20120 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_20120 IPR011006 CheY-like superfamily CFM90_20120 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_20130 IPR013126 Heat shock protein 70 family CFM90_20130 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CFM90_20130 IPR018181 Heat shock protein 70, conserved site CFM90_20130 IPR042030 Chaperone protein HscC, nucleotide-binding domain CFM90_20135 IPR001046 NRAMP family CFM90_20140 IPR007894 MASE2 CFM90_20140 IPR000160 GGDEF domain CFM90_20140 IPR029787 Nucleotide cyclase CFM90_20145 IPR037026 Vgr protein, OB-fold domain superfamily CFM90_20145 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CFM90_20145 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CFM90_20145 IPR032074 Actin cross-linking domain CFM90_20145 IPR006531 Gp5 N-terminal CFM90_20165 IPR010920 LSM domain superfamily CFM90_20165 IPR006685 Mechanosensitive ion channel MscS CFM90_20165 IPR011066 Mechanosensitive ion channel MscS, C-terminal CFM90_20165 IPR006686 Mechanosensitive ion channel MscS, conserved site CFM90_20165 IPR023408 Mechanosensitive ion channel MscS domain superfamily CFM90_20165 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CFM90_20185 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CFM90_20185 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CFM90_20200 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_20200 IPR003660 HAMP domain CFM90_20200 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_20200 IPR004090 Chemotaxis methyl-accepting receptor CFM90_20200 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_20200 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_20210 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFM90_20210 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CFM90_20210 IPR036291 NAD(P)-binding domain superfamily CFM90_20255 IPR011146 HIT-like domain CFM90_20255 IPR019808 Histidine triad, conserved site CFM90_20255 IPR036265 HIT-like superfamily CFM90_20255 IPR001310 Histidine triad (HIT) protein CFM90_20255 IPR039384 HINT family CFM90_20260 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_20260 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CFM90_20260 IPR001036 Acriflavin resistance protein CFM90_20265 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFM90_20265 IPR006143 RND efflux pump, membrane fusion protein CFM90_20265 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB CFM90_20270 IPR003423 Outer membrane efflux protein CFM90_20280 IPR011006 CheY-like superfamily CFM90_20280 IPR039420 Transcriptional regulatory protein WalR-like CFM90_20280 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_20280 IPR001789 Signal transduction response regulator, receiver domain CFM90_20280 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response CFM90_20280 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_20285 IPR006290 Heavy metal sensor kinase CFM90_20285 IPR003660 HAMP domain CFM90_20285 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_20285 IPR005467 Histidine kinase domain CFM90_20285 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_20285 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_20285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_20285 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_20290 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CFM90_20290 IPR003346 Transposase, IS116/IS110/IS902 CFM90_20295 IPR002933 Peptidase M20 CFM90_20295 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CFM90_20295 IPR011650 Peptidase M20, dimerisation domain CFM90_20295 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_20295 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CFM90_20310 IPR036412 HAD-like superfamily CFM90_20310 IPR037512 Phosphoglycolate phosphatase, prokaryotic CFM90_20310 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CFM90_20310 IPR023214 HAD superfamily CFM90_20310 IPR006439 HAD hydrolase, subfamily IA CFM90_20310 IPR041492 Haloacid dehalogenase-like hydrolase CFM90_20310 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CFM90_20320 IPR036291 NAD(P)-binding domain superfamily CFM90_20320 IPR023401 Ornithine cyclodeaminase, N-terminal CFM90_20320 IPR003462 Ornithine cyclodeaminase/mu-crystallin CFM90_20325 IPR019888 Transcription regulator AsnC-type CFM90_20325 IPR011008 Dimeric alpha-beta barrel CFM90_20325 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_20325 IPR000485 AsnC-type HTH domain CFM90_20325 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_20325 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_20325 IPR011991 ArsR-like helix-turn-helix domain CFM90_20325 IPR036390 Winged helix DNA-binding domain superfamily CFM90_20330 IPR018313 Solute-binding protein family 3, conserved site CFM90_20330 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_20340 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFM90_20340 IPR003593 AAA+ ATPase domain CFM90_20340 IPR003439 ABC transporter-like CFM90_20340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_20340 IPR017871 ABC transporter, conserved site CFM90_20345 IPR005119 LysR, substrate-binding CFM90_20345 IPR036390 Winged helix DNA-binding domain superfamily CFM90_20345 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_20345 IPR000847 Transcription regulator HTH, LysR CFM90_20350 IPR036291 NAD(P)-binding domain superfamily CFM90_20350 IPR001509 NAD-dependent epimerase/dehydratase CFM90_20355 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CFM90_20355 IPR013785 Aldolase-type TIM barrel CFM90_20370 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_20370 IPR003423 Outer membrane efflux protein CFM90_20380 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CFM90_20390 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CFM90_20390 IPR011701 Major facilitator superfamily CFM90_20390 IPR023692 Multidrug resistance protein MdtG CFM90_20390 IPR036259 MFS transporter superfamily CFM90_20390 IPR020846 Major facilitator superfamily domain CFM90_20405 IPR036390 Winged helix DNA-binding domain superfamily CFM90_20405 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_20405 IPR000847 Transcription regulator HTH, LysR CFM90_20405 IPR005119 LysR, substrate-binding CFM90_20425 IPR020843 Polyketide synthase, enoylreductase domain CFM90_20425 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_20425 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CFM90_20425 IPR011032 GroES-like superfamily CFM90_20425 IPR036291 NAD(P)-binding domain superfamily CFM90_20425 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_20430 IPR020846 Major facilitator superfamily domain CFM90_20430 IPR036259 MFS transporter superfamily CFM90_20430 IPR011701 Major facilitator superfamily CFM90_20435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_20435 IPR003439 ABC transporter-like CFM90_20435 IPR017871 ABC transporter, conserved site CFM90_20435 IPR003593 AAA+ ATPase domain CFM90_20435 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFM90_20450 IPR000836 Phosphoribosyltransferase domain CFM90_20450 IPR002925 Dienelactone hydrolase CFM90_20450 IPR029057 Phosphoribosyltransferase-like CFM90_20450 IPR029058 Alpha/Beta hydrolase fold CFM90_20455 IPR029066 PLP-binding barrel CFM90_20455 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CFM90_20455 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CFM90_20455 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CFM90_20455 IPR000183 Ornithine/DAP/Arg decarboxylase CFM90_20455 IPR022272 Lipocalin family conserved site CFM90_20455 IPR002433 Ornithine decarboxylase CFM90_20460 IPR040442 Pyruvate kinase-like domain superfamily CFM90_20460 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase CFM90_20460 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CFM90_20460 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_20465 IPR022770 Ferric iron reductase FhuF domain CFM90_20465 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CFM90_20465 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CFM90_20470 IPR022770 Ferric iron reductase FhuF domain CFM90_20470 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CFM90_20470 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CFM90_20475 IPR005829 Sugar transporter, conserved site CFM90_20475 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CFM90_20475 IPR020846 Major facilitator superfamily domain CFM90_20475 IPR036259 MFS transporter superfamily CFM90_20475 IPR004734 Multidrug resistance protein CFM90_20475 IPR011701 Major facilitator superfamily CFM90_20480 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CFM90_20480 IPR022770 Ferric iron reductase FhuF domain CFM90_20480 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CFM90_20485 IPR003462 Ornithine cyclodeaminase/mu-crystallin CFM90_20485 IPR023401 Ornithine cyclodeaminase, N-terminal CFM90_20485 IPR036291 NAD(P)-binding domain superfamily CFM90_20485 IPR007110 Immunoglobulin-like domain CFM90_20485 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB CFM90_20490 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_20490 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA CFM90_20490 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_20490 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CFM90_20495 IPR010105 TonB-dependent siderophore receptor CFM90_20495 IPR039426 Vitamin B12 transporter BtuB-like CFM90_20495 IPR012910 TonB-dependent receptor, plug domain CFM90_20495 IPR037066 TonB-dependent receptor, plug domain superfamily CFM90_20495 IPR000531 TonB-dependent receptor-like, beta-barrel CFM90_20495 IPR010916 TonB box, conserved site CFM90_20495 IPR010917 TonB-dependent receptor, conserved site CFM90_20495 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFM90_20505 IPR039423 TonB-dependent receptor-like CFM90_20505 IPR000531 TonB-dependent receptor-like, beta-barrel CFM90_20505 IPR037066 TonB-dependent receptor, plug domain superfamily CFM90_20505 IPR010916 TonB box, conserved site CFM90_20505 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFM90_20505 IPR030149 TonB-dependent siderophore receptor FcuA/FatA CFM90_20505 IPR010105 TonB-dependent siderophore receptor CFM90_20505 IPR010917 TonB-dependent receptor, conserved site CFM90_20505 IPR012910 TonB-dependent receptor, plug domain CFM90_20515 IPR036259 MFS transporter superfamily CFM90_20515 IPR020846 Major facilitator superfamily domain CFM90_20515 IPR011701 Major facilitator superfamily CFM90_20565 IPR000873 AMP-dependent synthetase/ligase CFM90_20565 IPR042099 AMP-dependent synthetase-like superfamily CFM90_20590 IPR024473 Transposase, IS4, N-terminal CFM90_20590 IPR002559 Transposase, IS4-like CFM90_20590 IPR012337 Ribonuclease H-like superfamily CFM90_20595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_20595 IPR041679 DNA2/NAM7 helicase-like, AAA domain CFM90_20595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_20595 IPR025103 Protein of unknown function DUF4011 CFM90_20595 IPR041677 DNA2/NAM7 helicase, AAA domain CFM90_20595 IPR025103 Protein of unknown function DUF4011 CFM90_20595 IPR041679 DNA2/NAM7 helicase-like, AAA domain CFM90_20595 IPR041677 DNA2/NAM7 helicase, AAA domain CFM90_20610 IPR001294 Phytochrome CFM90_20610 IPR003018 GAF domain CFM90_20610 IPR029016 GAF-like domain superfamily CFM90_20610 IPR000160 GGDEF domain CFM90_20610 IPR029787 Nucleotide cyclase CFM90_20610 IPR035919 EAL domain superfamily CFM90_20610 IPR013515 Phytochrome, central region CFM90_20610 IPR001633 EAL domain CFM90_20610 IPR016132 Phytochrome chromophore attachment domain CFM90_20620 IPR016132 Phytochrome chromophore attachment domain CFM90_20620 IPR013515 Phytochrome, central region CFM90_20620 IPR000160 GGDEF domain CFM90_20620 IPR001294 Phytochrome CFM90_20620 IPR029016 GAF-like domain superfamily CFM90_20620 IPR003018 GAF domain CFM90_20620 IPR035919 EAL domain superfamily CFM90_20620 IPR001633 EAL domain CFM90_20620 IPR029787 Nucleotide cyclase CFM90_20625 IPR016181 Acyl-CoA N-acyltransferase CFM90_20625 IPR000182 GNAT domain CFM90_20645 IPR040627 T3SS EscN ATPase, C-terminal CFM90_20645 IPR032463 ATPase, type III secretion system, FliI CFM90_20645 IPR005714 ATPase, type III secretion system, FliI/YscN CFM90_20645 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CFM90_20645 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CFM90_20645 IPR003593 AAA+ ATPase domain CFM90_20645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_20645 IPR020005 Flagellar export ATPase FliI, clade 1 CFM90_20650 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CFM90_20655 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CFM90_20655 IPR023087 Flagellar motor switch protein FliG, C-terminal CFM90_20655 IPR000090 Flagellar motor switch protein FliG CFM90_20655 IPR032779 Flagellar motor switch protein FliG, middle domain CFM90_20655 IPR011002 Flagellar motor switch protein FliG, alpha-helical CFM90_20660 IPR013556 Flagellar M-ring C-terminal CFM90_20660 IPR006182 Secretory protein YscJ/FliF CFM90_20660 IPR000067 Flagellar M-ring protein FliF CFM90_20665 IPR001624 Flagellar hook-basal body complex protein FliE CFM90_20675 IPR001173 Glycosyltransferase 2-like CFM90_20675 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_20680 IPR000835 MarR-type HTH domain CFM90_20680 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_20680 IPR036390 Winged helix DNA-binding domain superfamily CFM90_20690 IPR003713 Flagellar protein FliS CFM90_20690 IPR036584 Flagellar protein FliS superfamily CFM90_20695 IPR003481 Flagellar hook-associated protein 2, N-terminal CFM90_20695 IPR010809 Flagellar hook-associated protein 2, C-terminal CFM90_20695 IPR010810 Flagellin hook, IN motif CFM90_20695 IPR040026 Flagellar hook-associated protein 2 CFM90_20700 IPR001029 Flagellin, D0/D1 domain CFM90_20700 IPR001492 Flagellin CFM90_20705 IPR000792 Transcription regulator LuxR, C-terminal CFM90_20705 IPR001789 Signal transduction response regulator, receiver domain CFM90_20705 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_20705 IPR011006 CheY-like superfamily CFM90_20710 IPR001633 EAL domain CFM90_20710 IPR035919 EAL domain superfamily CFM90_20710 IPR000160 GGDEF domain CFM90_20710 IPR005330 MHYT domain CFM90_20710 IPR029787 Nucleotide cyclase CFM90_20720 IPR036429 SpoA-like superfamily CFM90_20720 IPR028976 CheC-like superfamily CFM90_20720 IPR001543 Surface presentation of antigen (SpoA) CFM90_20720 IPR001689 Flagellar motor switch protein FliM CFM90_20725 IPR001543 Surface presentation of antigen (SpoA) CFM90_20725 IPR012826 Flagellar motor switch FliN CFM90_20725 IPR031576 Flagellar motor switch protein FliN, N-terminal CFM90_20725 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CFM90_20725 IPR036429 SpoA-like superfamily CFM90_20730 IPR022781 Flagellar biosynthesis protein, FliO CFM90_20735 IPR005838 Type III secretion system inner membrane P protein CFM90_20735 IPR005837 Flagellar transport protein FliP CFM90_20740 IPR006305 Flagellar biosynthesis protein FliQ CFM90_20740 IPR002191 Bacterial export protein family 3 CFM90_20745 IPR002010 Type III secretion system inner membrane R protein CFM90_20745 IPR006303 Flagellar biosynthesis protein FliR CFM90_20755 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CFM90_20755 IPR002123 Phospholipid/glycerol acyltransferase CFM90_20765 IPR036736 ACP-like superfamily CFM90_20765 IPR003231 Acyl carrier protein (ACP) CFM90_20765 IPR009081 Phosphopantetheine binding ACP domain CFM90_20775 IPR020845 AMP-binding, conserved site CFM90_20775 IPR000873 AMP-dependent synthetase/ligase CFM90_20775 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_20775 IPR042099 AMP-dependent synthetase-like superfamily CFM90_20785 IPR001106 Aromatic amino acid lyase CFM90_20785 IPR024083 Fumarase/histidase, N-terminal CFM90_20785 IPR008948 L-Aspartase-like CFM90_20785 IPR022313 Phenylalanine/histidine ammonia-lyases, active site CFM90_20785 IPR005921 Histidine ammonia-lyase CFM90_20805 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFM90_20805 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CFM90_20805 IPR000794 Beta-ketoacyl synthase CFM90_20805 IPR018201 Beta-ketoacyl synthase, active site CFM90_20805 IPR014031 Beta-ketoacyl synthase, C-terminal CFM90_20805 IPR014030 Beta-ketoacyl synthase, N-terminal CFM90_20805 IPR016039 Thiolase-like CFM90_20815 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_20815 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative CFM90_20815 IPR036291 NAD(P)-binding domain superfamily CFM90_20820 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CFM90_20820 IPR000794 Beta-ketoacyl synthase CFM90_20820 IPR018201 Beta-ketoacyl synthase, active site CFM90_20820 IPR014031 Beta-ketoacyl synthase, C-terminal CFM90_20820 IPR016039 Thiolase-like CFM90_20820 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFM90_20820 IPR014030 Beta-ketoacyl synthase, N-terminal CFM90_20825 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFM90_20825 IPR000794 Beta-ketoacyl synthase CFM90_20825 IPR018201 Beta-ketoacyl synthase, active site CFM90_20825 IPR014031 Beta-ketoacyl synthase, C-terminal CFM90_20825 IPR014030 Beta-ketoacyl synthase, N-terminal CFM90_20825 IPR016039 Thiolase-like CFM90_20835 IPR013216 Methyltransferase type 11 CFM90_20835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_20835 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CFM90_20840 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_20840 IPR006905 Flavin-dependent halogenase CFM90_20850 IPR013384 Flagellar hook-associated protein 3 CFM90_20850 IPR001029 Flagellin, D0/D1 domain CFM90_20855 IPR002371 Flagellar hook-associated protein 1 CFM90_20855 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFM90_20855 IPR001444 Flagellar basal body rod protein, N-terminal CFM90_20860 IPR019301 Flagellar protein FlgJ, N-terminal CFM90_20860 IPR013377 Peptidoglycan hydrolase FlgJ CFM90_20860 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CFM90_20865 IPR001782 Flagellar P-ring protein CFM90_20870 IPR000527 Flagellar L-ring protein CFM90_20875 IPR019776 Flagellar basal body rod protein, conserved site CFM90_20875 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CFM90_20875 IPR001444 Flagellar basal body rod protein, N-terminal CFM90_20875 IPR012834 Flagellar basal-body rod FlgG CFM90_20875 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CFM90_20875 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFM90_20880 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CFM90_20880 IPR019776 Flagellar basal body rod protein, conserved site CFM90_20880 IPR001444 Flagellar basal body rod protein, N-terminal CFM90_20880 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFM90_20880 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CFM90_20885 IPR011491 Flagellar hook protein FlgE CFM90_20885 IPR019776 Flagellar basal body rod protein, conserved site CFM90_20885 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CFM90_20885 IPR001444 Flagellar basal body rod protein, N-terminal CFM90_20885 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFM90_20885 IPR037058 Flagellar hook protein FlgE superfamily CFM90_20885 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CFM90_20890 IPR025965 FlgD Ig-like domain CFM90_20890 IPR025963 FlgD Tudor-like domain CFM90_20890 IPR005648 Flagellar hook capping protein CFM90_20895 IPR001444 Flagellar basal body rod protein, N-terminal CFM90_20895 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFM90_20895 IPR019776 Flagellar basal body rod protein, conserved site CFM90_20895 IPR006299 Flagellar basal-body rod protein FlgC CFM90_20900 IPR001444 Flagellar basal body rod protein, N-terminal CFM90_20900 IPR019776 Flagellar basal body rod protein, conserved site CFM90_20900 IPR006300 Flagellar basal-body rod protein FlgB CFM90_20905 IPR039246 Flagellar protein FlgA CFM90_20905 IPR041231 FlgA, N-terminal CFM90_20905 IPR013974 SAF domain CFM90_20905 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CFM90_20920 IPR000792 Transcription regulator LuxR, C-terminal CFM90_20920 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_20925 IPR001702 Porin, Gram-negative type CFM90_20925 IPR002299 Porin, Neisseria sp. type CFM90_20925 IPR023614 Porin domain superfamily CFM90_20925 IPR033900 Porin domain, Gram-negative type CFM90_20930 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CFM90_20930 IPR010248 Histidine utilization repressor CFM90_20930 IPR000524 Transcription regulator HTH, GntR CFM90_20930 IPR011663 UbiC transcription regulator-associated CFM90_20930 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_20930 IPR036390 Winged helix DNA-binding domain superfamily CFM90_20935 IPR001801 Histone-like protein H-NS CFM90_20935 IPR027444 Histone-like protein H-NS, C-terminal domain CFM90_20945 IPR001633 EAL domain CFM90_20945 IPR029787 Nucleotide cyclase CFM90_20945 IPR005330 MHYT domain CFM90_20945 IPR000160 GGDEF domain CFM90_20945 IPR035919 EAL domain superfamily CFM90_20950 IPR008816 Glycine zipper 2TM domain CFM90_20955 IPR036288 Aconitase B, HEAT-like domain superfamily CFM90_20955 IPR015929 Aconitase B, swivel CFM90_20955 IPR036008 Aconitase, iron-sulfur domain CFM90_20955 IPR004406 Aconitase B CFM90_20955 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CFM90_20955 IPR015933 Aconitase B, HEAT-like domain CFM90_20955 IPR015932 Aconitase, domain 2 CFM90_20955 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFM90_20955 IPR018136 Aconitase family, 4Fe-4S cluster binding site CFM90_20955 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CFM90_20965 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CFM90_20965 IPR036008 Aconitase, iron-sulfur domain CFM90_20965 IPR018136 Aconitase family, 4Fe-4S cluster binding site CFM90_20965 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CFM90_20965 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFM90_20965 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CFM90_20965 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CFM90_20970 IPR024084 Isopropylmalate dehydrogenase-like domain CFM90_20985 IPR015946 K homology domain-like, alpha/beta CFM90_20985 IPR019953 Organic hydroperoxide resistance protein famiy CFM90_20985 IPR003718 OsmC/Ohr family CFM90_20985 IPR036102 OsmC/Ohr superfamily CFM90_20990 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily CFM90_20990 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_20990 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CFM90_20990 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily CFM90_20990 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CFM90_20990 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CFM90_20995 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_20995 IPR002888 [2Fe-2S]-binding CFM90_20995 IPR036884 [2Fe-2S]-binding domain superfamily CFM90_20995 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_20995 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CFM90_21010 IPR000891 Pyruvate carboxyltransferase CFM90_21010 IPR039371 LeuA, N-terminal catalytic TIM barrel domain CFM90_21010 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CFM90_21010 IPR013785 Aldolase-type TIM barrel CFM90_21010 IPR005668 2-isopropylmalate synthase CFM90_21010 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CFM90_21010 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CFM90_21020 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator CFM90_21020 IPR009061 Putative DNA-binding domain superfamily CFM90_21020 IPR000551 MerR-type HTH domain CFM90_21045 IPR006016 UspA CFM90_21045 IPR006015 Universal stress protein A family CFM90_21045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_21055 IPR004136 Nitronate monooxygenase CFM90_21055 IPR013785 Aldolase-type TIM barrel CFM90_21060 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_21060 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_21060 IPR005467 Histidine kinase domain CFM90_21060 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_21060 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_21060 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_21060 IPR003660 HAMP domain CFM90_21065 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_21065 IPR011006 CheY-like superfamily CFM90_21065 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_21065 IPR039420 Transcriptional regulatory protein WalR-like CFM90_21065 IPR001789 Signal transduction response regulator, receiver domain CFM90_21065 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_21070 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFM90_21070 IPR006143 RND efflux pump, membrane fusion protein CFM90_21075 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CFM90_21075 IPR001036 Acriflavin resistance protein CFM90_21075 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_21080 IPR003423 Outer membrane efflux protein CFM90_21080 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_21090 IPR036390 Winged helix DNA-binding domain superfamily CFM90_21090 IPR018309 Transcription regulator PadR, C-terminal CFM90_21090 IPR005149 Transcription regulator PadR, N-terminal CFM90_21090 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_21095 IPR005119 LysR, substrate-binding CFM90_21095 IPR000847 Transcription regulator HTH, LysR CFM90_21095 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_21095 IPR036390 Winged helix DNA-binding domain superfamily CFM90_21100 IPR013785 Aldolase-type TIM barrel CFM90_21100 IPR004136 Nitronate monooxygenase CFM90_21110 IPR036291 NAD(P)-binding domain superfamily CFM90_21110 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_21110 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_21120 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_21120 IPR003660 HAMP domain CFM90_21120 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_21120 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_21120 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_21120 IPR004090 Chemotaxis methyl-accepting receptor CFM90_21155 IPR003593 AAA+ ATPase domain CFM90_21155 IPR003439 ABC transporter-like CFM90_21155 IPR017871 ABC transporter, conserved site CFM90_21155 IPR010132 ATPase, type I secretion system, HlyB CFM90_21155 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_21155 IPR005074 Peptidase C39, bacteriocin processing CFM90_21155 IPR039395 Peptidase C39-like A CFM90_21155 IPR011527 ABC transporter type 1, transmembrane domain CFM90_21155 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFM90_21155 IPR039421 Type I protein exporter CFM90_21160 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CFM90_21160 IPR006144 Secretion protein HlyD, conserved site CFM90_21160 IPR010129 Type I secretion membrane fusion protein, HlyD family CFM90_21175 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_21175 IPR001173 Glycosyltransferase 2-like CFM90_21175 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA CFM90_21180 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CFM90_21180 IPR002509 NodB homology domain CFM90_21180 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB CFM90_21180 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal CFM90_21190 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_21190 IPR000792 Transcription regulator LuxR, C-terminal CFM90_21205 IPR002528 Multi antimicrobial extrusion protein CFM90_21210 IPR002293 Amino acid/polyamine transporter I CFM90_21215 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CFM90_21215 IPR029787 Nucleotide cyclase CFM90_21215 IPR000160 GGDEF domain CFM90_21230 IPR018232 Glycoside hydrolase, family 37, conserved site CFM90_21230 IPR001661 Glycoside hydrolase, family 37 CFM90_21230 IPR023720 Trehalase, periplasmic CFM90_21230 IPR012341 Six-hairpin glycosidase-like superfamily CFM90_21230 IPR008928 Six-hairpin glycosidase superfamily CFM90_21235 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_21235 IPR000644 CBS domain CFM90_21235 IPR005857 Cystathionine beta-synthase CFM90_21235 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_21245 IPR000101 Gamma-glutamyltranspeptidase CFM90_21245 IPR029055 Nucleophile aminohydrolases, N-terminal CFM90_21255 IPR011650 Peptidase M20, dimerisation domain CFM90_21255 IPR002933 Peptidase M20 CFM90_21255 IPR017150 Peptidase M20, glutamate carboxypeptidase CFM90_21255 IPR036264 Bacterial exopeptidase dimerisation domain CFM90_21255 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CFM90_21265 IPR002559 Transposase, IS4-like CFM90_21265 IPR008490 Transposase InsH, N-terminal CFM90_21305 IPR000182 GNAT domain CFM90_21305 IPR017813 Mycothiol acetyltransferase CFM90_21305 IPR016181 Acyl-CoA N-acyltransferase CFM90_21315 IPR013783 Immunoglobulin-like fold CFM90_21315 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_21315 IPR014756 Immunoglobulin E-set CFM90_21315 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal CFM90_21315 IPR014438 Glucan biosynthesis protein MdoG/MdoD CFM90_21315 IPR023724 Glucan biosynthesis, MdoD CFM90_21315 IPR014718 Glycoside hydrolase-type carbohydrate-binding CFM90_21315 IPR011013 Galactose mutarotase-like domain superfamily CFM90_21330 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CFM90_21330 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily CFM90_21330 IPR029762 Pyroglutamyl peptidase I, bacterial-type CFM90_21330 IPR033694 Pyroglutamyl peptidase I, Cys active site CFM90_21330 IPR000816 Peptidase C15, pyroglutamyl peptidase I CFM90_21350 IPR004090 Chemotaxis methyl-accepting receptor CFM90_21350 IPR003660 HAMP domain CFM90_21350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_21350 IPR001610 PAC motif CFM90_21350 IPR000014 PAS domain CFM90_21350 IPR035965 PAS domain superfamily CFM90_21350 IPR013655 PAS fold-3 CFM90_21355 IPR035919 EAL domain superfamily CFM90_21355 IPR029787 Nucleotide cyclase CFM90_21355 IPR001633 EAL domain CFM90_21355 IPR000160 GGDEF domain CFM90_21355 IPR005330 MHYT domain CFM90_21360 IPR013655 PAS fold-3 CFM90_21360 IPR029787 Nucleotide cyclase CFM90_21360 IPR001610 PAC motif CFM90_21360 IPR000014 PAS domain CFM90_21360 IPR001633 EAL domain CFM90_21360 IPR000700 PAS-associated, C-terminal CFM90_21360 IPR035965 PAS domain superfamily CFM90_21360 IPR013656 PAS fold-4 CFM90_21360 IPR007895 MASE1 CFM90_21360 IPR035919 EAL domain superfamily CFM90_21360 IPR000160 GGDEF domain CFM90_21370 IPR038157 Ferrous iron transporter, core domain CFM90_21370 IPR011640 Ferrous iron transport protein B, C-terminal CFM90_21370 IPR003373 Ferrous iron transport protein B CFM90_21370 IPR007167 Ferrous iron transporter FeoA domain CFM90_21370 IPR030389 FeoB-type guanine nucleotide-binding (G) domain CFM90_21370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_21370 IPR005225 Small GTP-binding protein domain CFM90_21370 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CFM90_21370 IPR008988 Transcriptional repressor, C-terminal CFM90_21370 IPR006073 GTP binding domain CFM90_21370 IPR041069 FeoB, cytosolic helical domain CFM90_21390 IPR036390 Winged helix DNA-binding domain superfamily CFM90_21390 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_21390 IPR002481 Ferric-uptake regulator CFM90_21395 IPR012336 Thioredoxin-like fold CFM90_21395 IPR012081 Alkyl hydroperoxide reductase subunit F CFM90_21395 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_21395 IPR023753 FAD/NAD(P)-binding domain CFM90_21395 IPR002109 Glutaredoxin CFM90_21395 IPR036249 Thioredoxin-like superfamily CFM90_21395 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CFM90_21400 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CFM90_21400 IPR024706 Peroxiredoxin, AhpC-type CFM90_21400 IPR019479 Peroxiredoxin, C-terminal CFM90_21400 IPR036249 Thioredoxin-like superfamily CFM90_21400 IPR013766 Thioredoxin domain CFM90_21400 IPR017559 Alkyl hydroperoxide reductase subunit C CFM90_21405 IPR010916 TonB box, conserved site CFM90_21405 IPR012910 TonB-dependent receptor, plug domain CFM90_21405 IPR039426 Vitamin B12 transporter BtuB-like CFM90_21405 IPR010917 TonB-dependent receptor, conserved site CFM90_21405 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFM90_21405 IPR037066 TonB-dependent receptor, plug domain superfamily CFM90_21405 IPR000531 TonB-dependent receptor-like, beta-barrel CFM90_21410 IPR007845 Haemin-degrading HemS/ChuX domain CFM90_21415 IPR011835 Bacterial/plant glycogen synthase CFM90_21415 IPR001296 Glycosyl transferase, family 1 CFM90_21415 IPR013534 Starch synthase, catalytic domain CFM90_21420 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CFM90_21420 IPR017853 Glycoside hydrolase superfamily CFM90_21420 IPR013780 Glycosyl hydrolase, all-beta CFM90_21420 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase CFM90_21420 IPR013783 Immunoglobulin-like fold CFM90_21420 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S CFM90_21425 IPR012810 Trehalose synthase/alpha-amylase, N-terminal CFM90_21425 IPR017853 Glycoside hydrolase superfamily CFM90_21425 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CFM90_21425 IPR013780 Glycosyl hydrolase, all-beta CFM90_21425 IPR032091 Maltogenic Amylase, C-terminal CFM90_21430 IPR013780 Glycosyl hydrolase, all-beta CFM90_21430 IPR037439 1,4-alpha-glucan-branching enzyme CFM90_21430 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CFM90_21430 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CFM90_21430 IPR004193 Glycoside hydrolase, family 13, N-terminal CFM90_21430 IPR014756 Immunoglobulin E-set CFM90_21430 IPR017853 Glycoside hydrolase superfamily CFM90_21430 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta CFM90_21430 IPR013783 Immunoglobulin-like fold CFM90_21435 IPR011837 Glycogen debranching enzyme, GlgX type CFM90_21435 IPR004193 Glycoside hydrolase, family 13, N-terminal CFM90_21435 IPR017853 Glycoside hydrolase superfamily CFM90_21435 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CFM90_21435 IPR014756 Immunoglobulin E-set CFM90_21435 IPR013780 Glycosyl hydrolase, all-beta CFM90_21435 IPR013783 Immunoglobulin-like fold CFM90_21440 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CFM90_21440 IPR017853 Glycoside hydrolase superfamily CFM90_21440 IPR014756 Immunoglobulin E-set CFM90_21440 IPR013780 Glycosyl hydrolase, all-beta CFM90_21440 IPR004193 Glycoside hydrolase, family 13, N-terminal CFM90_21440 IPR012768 Malto-oligosyltrehalose trehalohydrolase CFM90_21440 IPR013783 Immunoglobulin-like fold CFM90_21440 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CFM90_21445 IPR017853 Glycoside hydrolase superfamily CFM90_21445 IPR003385 Glycoside hydrolase, family 77 CFM90_21450 IPR012767 Maltooligosyl trehalose synthase CFM90_21450 IPR017853 Glycoside hydrolase superfamily CFM90_21450 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CFM90_21460 IPR032466 Metal-dependent hydrolase CFM90_21460 IPR006680 Amidohydrolase-related CFM90_21510 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_21510 IPR036291 NAD(P)-binding domain superfamily CFM90_21515 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_21515 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFM90_21515 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_21515 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_21515 IPR015590 Aldehyde dehydrogenase domain CFM90_21515 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_21520 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CFM90_21520 IPR009057 Homeobox-like domain superfamily CFM90_21520 IPR002197 DNA binding HTH domain, Fis-type CFM90_21520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_21520 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_21520 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_21520 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_21520 IPR025944 Sigma-54 interaction domain, conserved site CFM90_21520 IPR004096 4-vinyl reductase, 4VR CFM90_21520 IPR010523 Activator of aromatic catabolism CFM90_21520 IPR003593 AAA+ ATPase domain CFM90_21525 IPR036736 ACP-like superfamily CFM90_21525 IPR020845 AMP-binding, conserved site CFM90_21525 IPR036291 NAD(P)-binding domain superfamily CFM90_21525 IPR010080 Thioester reductase-like domain CFM90_21525 IPR000873 AMP-dependent synthetase/ligase CFM90_21525 IPR009081 Phosphopantetheine binding ACP domain CFM90_21525 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CFM90_21525 IPR013120 Male sterility, NAD-binding CFM90_21525 IPR042099 AMP-dependent synthetase-like superfamily CFM90_21530 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_21530 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_21530 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_21530 IPR015590 Aldehyde dehydrogenase domain CFM90_21530 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFM90_21535 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CFM90_21535 IPR029045 ClpP/crotonase-like domain superfamily CFM90_21535 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_21540 IPR036390 Winged helix DNA-binding domain superfamily CFM90_21540 IPR023187 Transcriptional regulator MarR-type, conserved site CFM90_21540 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_21540 IPR000835 MarR-type HTH domain CFM90_21545 IPR017938 Riboflavin synthase-like beta-barrel CFM90_21545 IPR000951 Phthalate dioxygenase reductase CFM90_21545 IPR001433 Oxidoreductase FAD/NAD(P)-binding CFM90_21545 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CFM90_21545 IPR017927 FAD-binding domain, ferredoxin reductase-type CFM90_21545 IPR012675 Beta-grasp domain superfamily CFM90_21545 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFM90_21545 IPR036010 2Fe-2S ferredoxin-like superfamily CFM90_21545 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CFM90_21550 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CFM90_21550 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CFM90_21550 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CFM90_21555 IPR036390 Winged helix DNA-binding domain superfamily CFM90_21555 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_21555 IPR000847 Transcription regulator HTH, LysR CFM90_21555 IPR005119 LysR, substrate-binding CFM90_21560 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_21560 IPR001789 Signal transduction response regulator, receiver domain CFM90_21560 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_21560 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_21560 IPR011006 CheY-like superfamily CFM90_21560 IPR005467 Histidine kinase domain CFM90_21560 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_21560 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_21580 IPR008490 Transposase InsH, N-terminal CFM90_21580 IPR002559 Transposase, IS4-like CFM90_21590 IPR011009 Protein kinase-like domain superfamily CFM90_21590 IPR000719 Protein kinase domain CFM90_21590 IPR008271 Serine/threonine-protein kinase, active site CFM90_21605 IPR000845 Nucleoside phosphorylase domain CFM90_21605 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily CFM90_21605 IPR011271 AMP nucleosidase CFM90_21605 IPR018953 AMP nucleoside phosphorylase, N-terminal CFM90_21605 IPR035994 Nucleoside phosphorylase superfamily CFM90_21630 IPR003346 Transposase, IS116/IS110/IS902 CFM90_21630 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal CFM90_21645 IPR002559 Transposase, IS4-like CFM90_21645 IPR008490 Transposase InsH, N-terminal CFM90_21650 IPR002559 Transposase, IS4-like CFM90_21650 IPR008490 Transposase InsH, N-terminal CFM90_21655 IPR002559 Transposase, IS4-like CFM90_21655 IPR008490 Transposase InsH, N-terminal CFM90_21670 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CFM90_21670 IPR029069 HotDog domain superfamily CFM90_21670 IPR006683 Thioesterase domain CFM90_21670 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CFM90_21690 IPR005814 Aminotransferase class-III CFM90_21690 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_21690 IPR036291 NAD(P)-binding domain superfamily CFM90_21695 IPR023380 DsbB-like superfamily CFM90_21695 IPR022920 Disulphide bond formation protein DsbB CFM90_21695 IPR003752 Disulphide bond formation protein DsbB/BdbC CFM90_21705 IPR000073 Alpha/beta hydrolase fold-1 CFM90_21705 IPR029058 Alpha/Beta hydrolase fold CFM90_21705 IPR005944 Proline iminopeptidase CFM90_21705 IPR002410 Peptidase S33 CFM90_21710 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CFM90_21710 IPR016039 Thiolase-like CFM90_21710 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CFM90_21710 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CFM90_21730 IPR002781 Transmembrane protein TauE-like CFM90_21760 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CFM90_21760 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CFM90_21760 IPR019405 Lactonase, 7-bladed beta propeller CFM90_21765 IPR011701 Major facilitator superfamily CFM90_21765 IPR036259 MFS transporter superfamily CFM90_21765 IPR020846 Major facilitator superfamily domain CFM90_21815 IPR013216 Methyltransferase type 11 CFM90_21815 IPR020803 Polyketide synthase, methyltransferase domain CFM90_21815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_21820 IPR010240 Cysteine desulfurase IscS CFM90_21820 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CFM90_21820 IPR000192 Aminotransferase class V domain CFM90_21820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_21820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_21820 IPR016454 Cysteine desulfurase CFM90_21820 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_21855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_21855 IPR002891 Adenylyl-sulfate kinase CFM90_21860 IPR006162 Phosphopantetheine attachment site CFM90_21860 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CFM90_21860 IPR001242 Condensation domain CFM90_21860 IPR042099 AMP-dependent synthetase-like superfamily CFM90_21860 IPR000873 AMP-dependent synthetase/ligase CFM90_21860 IPR020845 AMP-binding, conserved site CFM90_21860 IPR036736 ACP-like superfamily CFM90_21860 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_21860 IPR009081 Phosphopantetheine binding ACP domain CFM90_21860 IPR029058 Alpha/Beta hydrolase fold CFM90_21860 IPR001031 Thioesterase CFM90_21860 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CFM90_21860 IPR010071 Amino acid adenylation domain CFM90_21865 IPR038020 MbtH-like domain superfamily CFM90_21865 IPR005153 MbtH-like domain CFM90_21865 IPR037407 MbtH-like protein CFM90_21870 IPR002528 Multi antimicrobial extrusion protein CFM90_21880 IPR001547 Glycoside hydrolase, family 5 CFM90_21880 IPR017853 Glycoside hydrolase superfamily CFM90_21880 IPR018087 Glycoside hydrolase, family 5, conserved site CFM90_21900 IPR000983 Bacterial general secretion pathway protein G-type pilin CFM90_21900 IPR012902 Prokaryotic N-terminal methylation site CFM90_21900 IPR013545 Type II secretion system protein G CFM90_21900 IPR010054 General secretion pathway protein G CFM90_21905 IPR018076 Type II secretion system F domain CFM90_21905 IPR042094 Type II secretion system F domain superfamily CFM90_21905 IPR003004 GspF/PilC family CFM90_21905 IPR001992 Type II secretion system conserved site CFM90_21910 IPR003593 AAA+ ATPase domain CFM90_21910 IPR042181 Type II secretion system, protein E, N-terminal CFM90_21910 IPR013369 Type II secretion system GspE CFM90_21910 IPR037257 General secretory system II, protein E, N-terminal superfamily CFM90_21910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_21910 IPR001482 Type II/IV secretion system protein CFM90_21935 IPR038591 NolW-like superfamily CFM90_21935 IPR005644 NolW-like CFM90_21935 IPR001775 GspD/PilQ family CFM90_21935 IPR013355 Type IV pilus secretin PilQ CFM90_21935 IPR004846 Type II/III secretion system CFM90_21935 IPR004845 Type II secretion system GspD, conserved site CFM90_21940 IPR000983 Bacterial general secretion pathway protein G-type pilin CFM90_21940 IPR012902 Prokaryotic N-terminal methylation site CFM90_21940 IPR013545 Type II secretion system protein G CFM90_21940 IPR010054 General secretion pathway protein G CFM90_21945 IPR012902 Prokaryotic N-terminal methylation site CFM90_21945 IPR028188 Type IV pilin PilA CFM90_21960 IPR000070 Pectinesterase, catalytic CFM90_21960 IPR011050 Pectin lyase fold/virulence factor CFM90_21960 IPR033131 Pectinesterase, Asp active site CFM90_21960 IPR012334 Pectin lyase fold CFM90_21970 IPR023753 FAD/NAD(P)-binding domain CFM90_21970 IPR013785 Aldolase-type TIM barrel CFM90_21970 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CFM90_21970 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_21985 IPR000620 EamA domain CFM90_21990 IPR011006 CheY-like superfamily CFM90_21990 IPR001789 Signal transduction response regulator, receiver domain CFM90_21990 IPR000160 GGDEF domain CFM90_21990 IPR029787 Nucleotide cyclase CFM90_22005 IPR014017 UvrD-like DNA helicase, C-terminal CFM90_22005 IPR013986 DExx box DNA helicase domain superfamily CFM90_22005 IPR014016 UvrD-like helicase, ATP-binding domain CFM90_22005 IPR005752 ATP-dependent DNA helicase Rep CFM90_22005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22005 IPR034739 UvrD/AddA helicase, N-terminal CFM90_22005 IPR000212 DNA helicase, UvrD/REP type CFM90_22020 IPR001387 Cro/C1-type helix-turn-helix domain CFM90_22020 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_22020 IPR032758 Antitoxin MqsA/HigA-2 CFM90_22025 IPR009387 Toxin HigB-2 CFM90_22030 IPR002197 DNA binding HTH domain, Fis-type CFM90_22030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22030 IPR025944 Sigma-54 interaction domain, conserved site CFM90_22030 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_22030 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR CFM90_22030 IPR009057 Homeobox-like domain superfamily CFM90_22030 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_22030 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal CFM90_22030 IPR003593 AAA+ ATPase domain CFM90_22035 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_22035 IPR040442 Pyruvate kinase-like domain superfamily CFM90_22035 IPR012695 2-methylisocitrate lyase CFM90_22035 IPR039556 ICL/PEPM domain CFM90_22035 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CFM90_22040 IPR011278 2-methylcitrate synthase/citrate synthase type I CFM90_22040 IPR036969 Citrate synthase superfamily CFM90_22040 IPR024176 Citrate synthase, bacterial-type CFM90_22040 IPR019810 Citrate synthase active site CFM90_22040 IPR016142 Citrate synthase-like, large alpha subdomain CFM90_22040 IPR016143 Citrate synthase-like, small alpha subdomain CFM90_22040 IPR002020 Citrate synthase CFM90_22045 IPR036008 Aconitase, iron-sulfur domain CFM90_22045 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CFM90_22045 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CFM90_22045 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFM90_22045 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CFM90_22045 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent CFM90_22045 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CFM90_22050 IPR007400 PrpF protein CFM90_22050 IPR012709 2-methyl-aconitate isomerase PrpF CFM90_22090 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CFM90_22090 IPR036874 Carbonic anhydrase superfamily CFM90_22090 IPR001765 Carbonic anhydrase CFM90_22095 IPR002931 Transglutaminase-like CFM90_22095 IPR025403 Domain of unknown function DUF4129 CFM90_22095 IPR038765 Papain-like cysteine peptidase superfamily CFM90_22095 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal CFM90_22105 IPR011703 ATPase, AAA-3 CFM90_22105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22105 IPR041628 ChlI/MoxR, AAA lid domain CFM90_22120 IPR041879 YvgL-like, substrate binding domain CFM90_22120 IPR005950 Molybdate ABC transporter, substrate-binding protein CFM90_22130 IPR012910 TonB-dependent receptor, plug domain CFM90_22130 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFM90_22130 IPR039423 TonB-dependent receptor-like CFM90_22130 IPR010105 TonB-dependent siderophore receptor CFM90_22130 IPR000531 TonB-dependent receptor-like, beta-barrel CFM90_22130 IPR037066 TonB-dependent receptor, plug domain superfamily CFM90_22150 IPR036390 Winged helix DNA-binding domain superfamily CFM90_22150 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_22150 IPR002577 Helix-turn-helix, HxlR type CFM90_22150 IPR011991 ArsR-like helix-turn-helix domain CFM90_22160 IPR020846 Major facilitator superfamily domain CFM90_22160 IPR036259 MFS transporter superfamily CFM90_22160 IPR011701 Major facilitator superfamily CFM90_22170 IPR001387 Cro/C1-type helix-turn-helix domain CFM90_22170 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_22170 IPR014057 Uncharacterized protein HI1420 CFM90_22175 IPR036259 MFS transporter superfamily CFM90_22175 IPR020846 Major facilitator superfamily domain CFM90_22175 IPR005828 Major facilitator, sugar transporter-like CFM90_22175 IPR004736 MFS transporter, metabolite:H symporter CFM90_22175 IPR005829 Sugar transporter, conserved site CFM90_22215 IPR029069 HotDog domain superfamily CFM90_22215 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CFM90_22220 IPR000873 AMP-dependent synthetase/ligase CFM90_22220 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_22220 IPR011957 Benzoate-CoA ligase family CFM90_22225 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CFM90_22225 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CFM90_22225 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CFM90_22225 IPR006089 Acyl-CoA dehydrogenase, conserved site CFM90_22225 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CFM90_22225 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CFM90_22225 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CFM90_22230 IPR001753 Enoyl-CoA hydratase/isomerase CFM90_22230 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB CFM90_22230 IPR014748 Enoyl-CoA hydratase, C-terminal CFM90_22230 IPR029045 ClpP/crotonase-like domain superfamily CFM90_22240 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_22240 IPR036291 NAD(P)-binding domain superfamily CFM90_22240 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_22245 IPR002938 FAD-binding domain CFM90_22245 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_22260 IPR001460 Penicillin-binding protein, transpeptidase CFM90_22260 IPR002137 Beta-lactamase, class-D active site CFM90_22260 IPR012338 Beta-lactamase/transpeptidase-like CFM90_22270 IPR001801 Histone-like protein H-NS CFM90_22270 IPR027444 Histone-like protein H-NS, C-terminal domain CFM90_22290 IPR002559 Transposase, IS4-like CFM90_22290 IPR008490 Transposase InsH, N-terminal CFM90_22300 IPR008914 Phosphatidylethanolamine-binding protein CFM90_22300 IPR036610 PEBP-like superfamily CFM90_22300 IPR005247 YbhB/YbcL CFM90_22315 IPR001807 Chloride channel, voltage gated CFM90_22315 IPR023790 Chloride channel, voltage-gated, ClcB CFM90_22315 IPR014743 Chloride channel, core CFM90_22325 IPR005119 LysR, substrate-binding CFM90_22325 IPR037421 HTH-type transcriptional regulator ClcR, PBP2 domain CFM90_22325 IPR000847 Transcription regulator HTH, LysR CFM90_22325 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_22325 IPR036390 Winged helix DNA-binding domain superfamily CFM90_22330 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CFM90_22330 IPR003439 ABC transporter-like CFM90_22330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22330 IPR017871 ABC transporter, conserved site CFM90_22330 IPR003593 AAA+ ATPase domain CFM90_22335 IPR003593 AAA+ ATPase domain CFM90_22335 IPR003439 ABC transporter-like CFM90_22335 IPR017871 ABC transporter, conserved site CFM90_22335 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFM90_22335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22340 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CFM90_22340 IPR001851 ABC transporter, permease CFM90_22345 IPR001851 ABC transporter, permease CFM90_22350 IPR000709 Leu/Ile/Val-binding protein CFM90_22350 IPR028081 Leucine-binding protein domain CFM90_22350 IPR028082 Periplasmic binding protein-like I CFM90_22355 IPR001610 PAC motif CFM90_22355 IPR000160 GGDEF domain CFM90_22355 IPR007895 MASE1 CFM90_22355 IPR000700 PAS-associated, C-terminal CFM90_22355 IPR000014 PAS domain CFM90_22355 IPR029787 Nucleotide cyclase CFM90_22355 IPR013656 PAS fold-4 CFM90_22355 IPR035919 EAL domain superfamily CFM90_22355 IPR001633 EAL domain CFM90_22355 IPR013655 PAS fold-3 CFM90_22355 IPR035965 PAS domain superfamily CFM90_22365 IPR011397 Intramembrane metalloprotease YhfC CFM90_22370 IPR025944 Sigma-54 interaction domain, conserved site CFM90_22370 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_22370 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_22370 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_22370 IPR001789 Signal transduction response regulator, receiver domain CFM90_22370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22370 IPR009057 Homeobox-like domain superfamily CFM90_22370 IPR011006 CheY-like superfamily CFM90_22370 IPR003593 AAA+ ATPase domain CFM90_22370 IPR002197 DNA binding HTH domain, Fis-type CFM90_22375 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_22375 IPR029151 Periplasmic sensor-like domain superfamily CFM90_22375 IPR005467 Histidine kinase domain CFM90_22375 IPR033479 Double Cache domain 1 CFM90_22375 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_22375 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CFM90_22375 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_22375 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_22375 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_22380 IPR005828 Major facilitator, sugar transporter-like CFM90_22380 IPR020846 Major facilitator superfamily domain CFM90_22380 IPR004736 MFS transporter, metabolite:H symporter CFM90_22380 IPR005829 Sugar transporter, conserved site CFM90_22380 IPR036259 MFS transporter superfamily CFM90_22385 IPR029044 Nucleotide-diphospho-sugar transferases CFM90_22385 IPR005835 Nucleotidyl transferase domain CFM90_22385 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CFM90_22395 IPR036086 ParB/Sulfiredoxin superfamily CFM90_22395 IPR004437 ParB/RepB/Spo0J partition protein CFM90_22395 IPR003115 ParB/Sulfiredoxin CFM90_22395 IPR023705 Nucleoid occlusion protein CFM90_22395 IPR041468 ParB/Spo0J, HTH domain CFM90_22400 IPR025669 AAA domain CFM90_22400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22405 IPR002611 IstB-like ATP-binding protein CFM90_22405 IPR003593 AAA+ ATPase domain CFM90_22405 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CFM90_22410 IPR036397 Ribonuclease H superfamily CFM90_22410 IPR012337 Ribonuclease H-like superfamily CFM90_22410 IPR001584 Integrase, catalytic core CFM90_22410 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type CFM90_22415 IPR012340 Nucleic acid-binding, OB-fold CFM90_22415 IPR012156 Cold shock, CspA CFM90_22415 IPR002059 Cold-shock protein, DNA-binding CFM90_22415 IPR011129 Cold shock domain CFM90_22415 IPR019844 Cold-shock (CSD) domain CFM90_22425 IPR006043 Xanthine/uracil/vitamin C permease CFM90_22425 IPR026033 Azaguanine-like transporters CFM90_22435 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_22435 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_22435 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_22435 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_22435 IPR005467 Histidine kinase domain CFM90_22435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_22435 IPR000700 PAS-associated, C-terminal CFM90_22460 IPR007046 RNA polymerase sigma factor 54, core-binding domain CFM90_22460 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CFM90_22460 IPR007634 RNA polymerase sigma factor 54, DNA-binding CFM90_22460 IPR000394 RNA polymerase sigma factor 54 CFM90_22470 IPR025944 Sigma-54 interaction domain, conserved site CFM90_22470 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_22470 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_22470 IPR003593 AAA+ ATPase domain CFM90_22470 IPR003018 GAF domain CFM90_22470 IPR029016 GAF-like domain superfamily CFM90_22470 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_22470 IPR009057 Homeobox-like domain superfamily CFM90_22470 IPR002197 DNA binding HTH domain, Fis-type CFM90_22470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22475 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_22475 IPR003593 AAA+ ATPase domain CFM90_22475 IPR002197 DNA binding HTH domain, Fis-type CFM90_22475 IPR011006 CheY-like superfamily CFM90_22475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22475 IPR001789 Signal transduction response regulator, receiver domain CFM90_22475 IPR009057 Homeobox-like domain superfamily CFM90_22475 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_22475 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_22475 IPR025944 Sigma-54 interaction domain, conserved site CFM90_22500 IPR000795 Transcription factor, GTP-binding domain CFM90_22500 IPR031157 Tr-type G domain, conserved site CFM90_22500 IPR004161 Translation elongation factor EFTu-like, domain 2 CFM90_22500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22500 IPR005225 Small GTP-binding protein domain CFM90_22500 IPR009000 Translation protein, beta-barrel domain superfamily CFM90_22500 IPR041732 Peptide chain release factor 3, GTP-binding domain CFM90_22500 IPR035647 EF-G domain III/V-like CFM90_22500 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CFM90_22500 IPR004548 Peptide chain release factor 3 CFM90_22500 IPR032090 Peptide chain release factor 3, C-terminal CFM90_22510 IPR006162 Phosphopantetheine attachment site CFM90_22510 IPR036736 ACP-like superfamily CFM90_22510 IPR003231 Acyl carrier protein (ACP) CFM90_22510 IPR009081 Phosphopantetheine binding ACP domain CFM90_22520 IPR003333 Mycolic acid cyclopropane synthase CFM90_22520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_22550 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_22550 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CFM90_22550 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CFM90_22550 IPR013325 RNA polymerase sigma factor, region 2 CFM90_22550 IPR014293 RNA polymerase sigma-70, actinobacteria CFM90_22550 IPR014284 RNA polymerase sigma-70 like domain CFM90_22550 IPR039425 RNA polymerase sigma-70 like CFM90_22550 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_22550 IPR007627 RNA polymerase sigma-70 region 2 CFM90_22565 IPR011990 Tetratricopeptide-like helical domain superfamily CFM90_22565 IPR019734 Tetratricopeptide repeat CFM90_22565 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CFM90_22565 IPR000780 MCP methyltransferase, CheR-type CFM90_22565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_22565 IPR013026 Tetratricopeptide repeat-containing domain CFM90_22585 IPR005625 PepSY-associated TM protein CFM90_22610 IPR000843 LacI-type HTH domain CFM90_22610 IPR028082 Periplasmic binding protein-like I CFM90_22610 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_22615 IPR036291 NAD(P)-binding domain superfamily CFM90_22615 IPR001509 NAD-dependent epimerase/dehydratase CFM90_22620 IPR001851 ABC transporter, permease CFM90_22625 IPR003439 ABC transporter-like CFM90_22625 IPR003593 AAA+ ATPase domain CFM90_22625 IPR013455 ABC transporter, D-xylose, ATP-binding protein CFM90_22625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_22630 IPR028082 Periplasmic binding protein-like I CFM90_22630 IPR025997 Periplasmic binding protein CFM90_22630 IPR013456 D-xylose ABC transporter, substrate-binding protein CFM90_22635 IPR038673 Carbohydrate-selective porin OprB superfamily CFM90_22635 IPR007049 Carbohydrate-selective porin OprB CFM90_22670 IPR035919 EAL domain superfamily CFM90_22670 IPR013515 Phytochrome, central region CFM90_22670 IPR001294 Phytochrome CFM90_22670 IPR029787 Nucleotide cyclase CFM90_22670 IPR000160 GGDEF domain CFM90_22670 IPR029016 GAF-like domain superfamily CFM90_22670 IPR003018 GAF domain CFM90_22670 IPR001633 EAL domain CFM90_22670 IPR016132 Phytochrome chromophore attachment domain CFM90_22675 IPR030856 Sensor histidine kinase RcsC CFM90_22675 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_22675 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal CFM90_22675 IPR001789 Signal transduction response regulator, receiver domain CFM90_22675 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_22675 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_22675 IPR005467 Histidine kinase domain CFM90_22675 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_22675 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_22675 IPR038388 RcsC, C-terminal domain superfamily CFM90_22675 IPR011006 CheY-like superfamily CFM90_22685 IPR011049 Serralysin-like metalloprotease, C-terminal CFM90_22685 IPR008635 Coiled stalk of trimeric autotransporter adhesin CFM90_22685 IPR005594 YadA-like, C-terminal CFM90_22685 IPR008635 Coiled stalk of trimeric autotransporter adhesin CFM90_22685 IPR024973 ESPR domain CFM90_22685 IPR024973 ESPR domain CFM90_22685 IPR011049 Serralysin-like metalloprotease, C-terminal CFM90_22685 IPR008640 Head domain of trimeric autotransporter adhesin CFM90_22685 IPR005594 YadA-like, C-terminal CFM90_22685 IPR008640 Head domain of trimeric autotransporter adhesin CFM90_22690 IPR002500 Phosphoadenosine phosphosulphate reductase CFM90_22690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_22690 IPR021845 Protein of unknown function DUF3440 CFM90_22700 IPR003115 ParB/Sulfiredoxin CFM90_22700 IPR036086 ParB/Sulfiredoxin superfamily CFM90_22705 IPR000843 LacI-type HTH domain CFM90_22705 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_22705 IPR028082 Periplasmic binding protein-like I CFM90_22710 IPR017654 Galactarate dehydratase GarD-like CFM90_22710 IPR013974 SAF domain CFM90_22710 IPR007392 D-galactarate/Altronate dehydratase, C-terminal CFM90_22715 IPR036259 MFS transporter superfamily CFM90_22715 IPR000849 Sugar phosphate transporter CFM90_22715 IPR011701 Major facilitator superfamily CFM90_22715 IPR020846 Major facilitator superfamily domain CFM90_22720 IPR040442 Pyruvate kinase-like domain superfamily CFM90_22720 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_22720 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CFM90_22720 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase CFM90_22725 IPR024084 Isopropylmalate dehydrogenase-like domain CFM90_22725 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CFM90_22725 IPR011829 Tartrate dehydrogenase CFM90_22730 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_22730 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFM90_22730 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_22730 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_22730 IPR010102 Succinate semialdehyde dehydrogenase CFM90_22730 IPR015590 Aldehyde dehydrogenase domain CFM90_22730 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_22790 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_22790 IPR003423 Outer membrane efflux protein CFM90_22795 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFM90_22795 IPR006143 RND efflux pump, membrane fusion protein CFM90_22795 IPR030190 Macrolide export protein MacA CFM90_22800 IPR001036 Acriflavin resistance protein CFM90_22800 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_22810 IPR005829 Sugar transporter, conserved site CFM90_22810 IPR020846 Major facilitator superfamily domain CFM90_22810 IPR011701 Major facilitator superfamily CFM90_22810 IPR036259 MFS transporter superfamily CFM90_22815 IPR033900 Porin domain, Gram-negative type CFM90_22815 IPR001702 Porin, Gram-negative type CFM90_22815 IPR002299 Porin, Neisseria sp. type CFM90_22815 IPR023614 Porin domain superfamily CFM90_22835 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_22835 IPR005119 LysR, substrate-binding CFM90_22835 IPR000847 Transcription regulator HTH, LysR CFM90_22835 IPR036390 Winged helix DNA-binding domain superfamily CFM90_22840 IPR000709 Leu/Ile/Val-binding protein CFM90_22840 IPR028081 Leucine-binding protein domain CFM90_22840 IPR028082 Periplasmic binding protein-like I CFM90_22845 IPR015590 Aldehyde dehydrogenase domain CFM90_22845 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CFM90_22845 IPR010102 Succinate semialdehyde dehydrogenase CFM90_22845 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_22845 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_22845 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_22845 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_22850 IPR006076 FAD dependent oxidoreductase CFM90_22850 IPR012727 Glycine oxidase ThiO CFM90_22850 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_22880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_22880 IPR006237 L-methionine gamma-lyase CFM90_22880 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_22880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_22880 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CFM90_22900 IPR020835 Catalase superfamily CFM90_22900 IPR037060 Catalase core domain superfamily CFM90_22900 IPR024708 Catalase active site CFM90_22900 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CFM90_22900 IPR011614 Catalase core domain CFM90_22900 IPR018028 Catalase, mono-functional, haem-containing CFM90_22900 IPR002226 Catalase haem-binding site CFM90_22900 IPR010582 Catalase immune-responsive domain CFM90_22915 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_22915 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_22915 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CFM90_22915 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CFM90_22915 IPR000792 Transcription regulator LuxR, C-terminal CFM90_22920 IPR023696 Ureohydrolase domain superfamily CFM90_22920 IPR005925 Agmatinase-related CFM90_22920 IPR006035 Ureohydrolase CFM90_22925 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFM90_22925 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_22925 IPR035906 MetI-like superfamily CFM90_22935 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_22935 IPR037297 Probable ABC transporter arginine-binding protein ArtJ, PBP2 domain CFM90_22950 IPR011701 Major facilitator superfamily CFM90_22950 IPR036259 MFS transporter superfamily CFM90_22950 IPR020846 Major facilitator superfamily domain CFM90_22970 IPR035919 EAL domain superfamily CFM90_22970 IPR001633 EAL domain CFM90_22970 IPR005330 MHYT domain CFM90_22970 IPR029787 Nucleotide cyclase CFM90_22970 IPR000160 GGDEF domain CFM90_22995 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_22995 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_22995 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_22995 IPR004839 Aminotransferase, class I/classII CFM90_23005 IPR002559 Transposase, IS4-like CFM90_23005 IPR008490 Transposase InsH, N-terminal CFM90_23020 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CFM90_23020 IPR035973 Cytochrome c oxidase subunit III-like superfamily CFM90_23020 IPR000298 Cytochrome c oxidase subunit III-like CFM90_23020 IPR024791 Cytochrome c oxidase subunit III CFM90_23030 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CFM90_23030 IPR000883 Cytochrome c oxidase subunit I CFM90_23030 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CFM90_23030 IPR023616 Cytochrome c oxidase-like, subunit I domain CFM90_23035 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CFM90_23035 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CFM90_23035 IPR008972 Cupredoxin CFM90_23035 IPR001505 Copper centre Cu(A) CFM90_23050 IPR006015 Universal stress protein A family CFM90_23050 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_23050 IPR006016 UspA CFM90_23055 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CFM90_23055 IPR037237 IlvD/EDD, N-terminal domain CFM90_23055 IPR042096 Dihydroxy-acid dehydratase, C-terminal CFM90_23055 IPR004786 6-phosphogluconate dehydratase CFM90_23055 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CFM90_23060 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CFM90_23060 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CFM90_23060 IPR019796 Glucose-6-phosphate dehydrogenase, active site CFM90_23060 IPR001282 Glucose-6-phosphate dehydrogenase CFM90_23060 IPR036291 NAD(P)-binding domain superfamily CFM90_23065 IPR039104 6-Phosphogluconolactonase CFM90_23065 IPR037171 NagB/RpiA transferase-like CFM90_23065 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CFM90_23065 IPR005900 6-phosphogluconolactonase, DevB-type CFM90_23075 IPR000281 Helix-turn-helix protein RpiR CFM90_23075 IPR009057 Homeobox-like domain superfamily CFM90_23075 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_23075 IPR003836 Glucokinase CFM90_23075 IPR001347 Sugar isomerase (SIS) CFM90_23075 IPR035472 RpiR-like, SIS domain CFM90_23080 IPR008718 NolX CFM90_23085 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_23085 IPR039420 Transcriptional regulatory protein WalR-like CFM90_23085 IPR001789 Signal transduction response regulator, receiver domain CFM90_23085 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_23085 IPR011006 CheY-like superfamily CFM90_23090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_23090 IPR013727 Two-component sensor kinase, N-terminal CFM90_23090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_23090 IPR005467 Histidine kinase domain CFM90_23090 IPR003660 HAMP domain CFM90_23090 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_23090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_23090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_23095 IPR001478 PDZ domain CFM90_23095 IPR011782 Peptidase S1C, Do CFM90_23095 IPR001940 Peptidase S1C CFM90_23095 IPR009003 Peptidase S1, PA clan CFM90_23095 IPR036034 PDZ superfamily CFM90_23125 IPR006914 VENN motif-containing domain CFM90_23125 IPR038181 Novel toxin 21 superfamily CFM90_23125 IPR025157 Hemagglutinin repeat CFM90_23125 IPR012334 Pectin lyase fold CFM90_23125 IPR008638 Filamentous haemagglutinin, N-terminal CFM90_23125 IPR008619 Filamentous haemagglutinin repeat CFM90_23125 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CFM90_23125 IPR028190 Novel toxin 21 CFM90_23125 IPR011050 Pectin lyase fold/virulence factor CFM90_23140 IPR008619 Filamentous haemagglutinin repeat CFM90_23140 IPR024973 ESPR domain CFM90_23140 IPR008638 Filamentous haemagglutinin, N-terminal CFM90_23140 IPR025157 Hemagglutinin repeat CFM90_23140 IPR012334 Pectin lyase fold CFM90_23140 IPR011050 Pectin lyase fold/virulence factor CFM90_23145 IPR005565 Haemolysin activator HlyB, C-terminal CFM90_23145 IPR013686 Polypeptide-transport-associated, ShlB-type CFM90_23145 IPR034746 POTRA domain CFM90_23145 IPR035251 ShlB, POTRA domain CFM90_23145 IPR027282 Two partner secretion pathway transporter CFM90_23150 IPR027304 Trigger factor/SurA domain superfamily CFM90_23150 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CFM90_23150 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CFM90_23165 IPR033138 Multicopper oxidases, conserved site CFM90_23165 IPR011706 Multicopper oxidase, type 2 CFM90_23165 IPR011707 Multicopper oxidase, type 3 CFM90_23165 IPR008972 Cupredoxin CFM90_23165 IPR002355 Multicopper oxidase, copper-binding site CFM90_23170 IPR005123 Oxoglutarate/iron-dependent dioxygenase CFM90_23170 IPR026992 Non-haem dioxygenase N-terminal domain CFM90_23170 IPR027443 Isopenicillin N synthase-like CFM90_23195 IPR022764 Peptidase S54, rhomboid domain CFM90_23195 IPR035952 Rhomboid-like superfamily CFM90_23200 IPR000160 GGDEF domain CFM90_23200 IPR001789 Signal transduction response regulator, receiver domain CFM90_23200 IPR029787 Nucleotide cyclase CFM90_23200 IPR011006 CheY-like superfamily CFM90_23210 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CFM90_23210 IPR016181 Acyl-CoA N-acyltransferase CFM90_23210 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CFM90_23225 IPR001902 SLC26A/SulP transporter CFM90_23225 IPR011547 SLC26A/SulP transporter domain CFM90_23225 IPR002645 STAS domain CFM90_23225 IPR036513 STAS domain superfamily CFM90_23235 IPR039445 Transcriptional regulator DauR-like, HTH domain CFM90_23235 IPR039446 Transcriptional regulator DauR-like CFM90_23235 IPR013559 YheO-like CFM90_23240 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CFM90_23240 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFM90_23240 IPR001926 Pyridoxal-phosphate dependent enzyme CFM90_23250 IPR005119 LysR, substrate-binding CFM90_23250 IPR000847 Transcription regulator HTH, LysR CFM90_23250 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_23250 IPR036390 Winged helix DNA-binding domain superfamily CFM90_23270 IPR029787 Nucleotide cyclase CFM90_23270 IPR001789 Signal transduction response regulator, receiver domain CFM90_23270 IPR000160 GGDEF domain CFM90_23270 IPR011006 CheY-like superfamily CFM90_23285 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_23285 IPR035906 MetI-like superfamily CFM90_23290 IPR003593 AAA+ ATPase domain CFM90_23290 IPR015859 ABC transporter, taurine import, TauD CFM90_23290 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_23290 IPR017871 ABC transporter, conserved site CFM90_23290 IPR003439 ABC transporter-like CFM90_23295 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CFM90_23295 IPR000524 Transcription regulator HTH, GntR CFM90_23295 IPR011663 UbiC transcription regulator-associated CFM90_23295 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_23295 IPR036390 Winged helix DNA-binding domain superfamily CFM90_23300 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CFM90_23300 IPR000883 Cytochrome c oxidase subunit I CFM90_23300 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CFM90_23300 IPR023616 Cytochrome c oxidase-like, subunit I domain CFM90_23310 IPR008972 Cupredoxin CFM90_23310 IPR001287 Nitrite reductase, copper-type CFM90_23310 IPR011707 Multicopper oxidase, type 3 CFM90_23345 IPR003148 Regulator of K+ conductance, N-terminal CFM90_23345 IPR038770 Sodium/solute symporter superfamily CFM90_23345 IPR036291 NAD(P)-binding domain superfamily CFM90_23345 IPR006153 Cation/H+ exchanger CFM90_23345 IPR004771 K+/H+ exchanger CFM90_23350 IPR005025 NADPH-dependent FMN reductase-like CFM90_23350 IPR029039 Flavoprotein-like superfamily CFM90_23370 IPR031730 Carbamoyltransferase, C-terminal CFM90_23370 IPR038152 Carbamoyltransferase, C-terminal domain superfamily CFM90_23370 IPR003696 Carbamoyltransferase CFM90_23390 IPR011761 ATP-grasp fold CFM90_23390 IPR013815 ATP-grasp fold, subdomain 1 CFM90_23400 IPR019913 Pyrimidine utilisation protein RutD CFM90_23400 IPR000073 Alpha/beta hydrolase fold-1 CFM90_23400 IPR029058 Alpha/Beta hydrolase fold CFM90_23430 IPR000847 Transcription regulator HTH, LysR CFM90_23430 IPR005119 LysR, substrate-binding CFM90_23430 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_23430 IPR036390 Winged helix DNA-binding domain superfamily CFM90_23460 IPR036812 NADP-dependent oxidoreductase domain superfamily CFM90_23460 IPR023210 NADP-dependent oxidoreductase domain CFM90_23470 IPR036390 Winged helix DNA-binding domain superfamily CFM90_23470 IPR000847 Transcription regulator HTH, LysR CFM90_23470 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_23470 IPR005119 LysR, substrate-binding CFM90_23500 IPR025857 MacB-like periplasmic core domain CFM90_23500 IPR003593 AAA+ ATPase domain CFM90_23500 IPR003838 ABC transporter permease protein domain CFM90_23500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_23500 IPR003439 ABC transporter-like CFM90_23500 IPR017911 ABC transporter, macrolide export, ATP-binding domain CFM90_23500 IPR017871 ABC transporter, conserved site CFM90_23505 IPR017871 ABC transporter, conserved site CFM90_23505 IPR015854 ABC transporter, lipoprotein release, LolD CFM90_23505 IPR003439 ABC transporter-like CFM90_23505 IPR003593 AAA+ ATPase domain CFM90_23505 IPR011924 Lipoprotein releasing system, ATP-binding protein CFM90_23505 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_23530 IPR025668 Transposase DDE domain CFM90_23540 IPR029058 Alpha/Beta hydrolase fold CFM90_23540 IPR000073 Alpha/beta hydrolase fold-1 CFM90_23545 IPR020846 Major facilitator superfamily domain CFM90_23545 IPR036259 MFS transporter superfamily CFM90_23545 IPR011701 Major facilitator superfamily CFM90_23565 IPR023559 Flagellar transcriptional activator FlhD CFM90_23565 IPR036194 Flagellar transcriptional activator FlhD superfamily CFM90_23570 IPR007944 Flagellar transcriptional activator FlhC CFM90_23575 IPR002898 MotA/TolQ/ExbB proton channel CFM90_23575 IPR000540 Flagellar motor protein MotA, conserved site CFM90_23575 IPR022522 Flagellar motor stator, MotA CFM90_23580 IPR036737 OmpA-like domain superfamily CFM90_23580 IPR025713 Motility protein B, N-terminal domain CFM90_23580 IPR006665 OmpA-like domain CFM90_23585 IPR001789 Signal transduction response regulator, receiver domain CFM90_23585 IPR011006 CheY-like superfamily CFM90_23590 IPR002545 CheW-like domain CFM90_23590 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CFM90_23590 IPR004105 Histidine kinase CheA-like, homodimeric domain CFM90_23590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_23590 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CFM90_23590 IPR036061 CheW-like domain superfamily CFM90_23590 IPR015162 CheY binding CFM90_23590 IPR035891 CheY-binding domain of CheA CFM90_23590 IPR005467 Histidine kinase domain CFM90_23590 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_23590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_23590 IPR036641 HPT domain superfamily CFM90_23590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_23595 IPR036061 CheW-like domain superfamily CFM90_23595 IPR002545 CheW-like domain CFM90_23595 IPR039315 Chemotaxis protein CheW CFM90_23600 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_23600 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_23600 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_23600 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_23600 IPR003660 HAMP domain CFM90_23600 IPR004090 Chemotaxis methyl-accepting receptor CFM90_23605 IPR000780 MCP methyltransferase, CheR-type CFM90_23605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_23605 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CFM90_23605 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CFM90_23605 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CFM90_23605 IPR026024 Chemotaxis protein methyltransferase CheR CFM90_23610 IPR011324 Cytotoxic necrotizing factor-like, catalytic CFM90_23610 IPR005659 Chemoreceptor glutamine deamidase CheD CFM90_23610 IPR038592 CheD-like superfamily CFM90_23615 IPR011006 CheY-like superfamily CFM90_23615 IPR035909 Methylesterase CheB, C-terminal CFM90_23615 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CFM90_23615 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CFM90_23615 IPR001789 Signal transduction response regulator, receiver domain CFM90_23620 IPR011006 CheY-like superfamily CFM90_23620 IPR001789 Signal transduction response regulator, receiver domain CFM90_23625 IPR007439 Chemotaxis phosphatase, CheZ CFM90_23630 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CFM90_23630 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal CFM90_23630 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CFM90_23630 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal CFM90_23630 IPR005956 4-hydroxyphenylpyruvate dioxygenase CFM90_23630 IPR037523 Vicinal oxygen chelate (VOC) domain CFM90_23635 IPR033900 Porin domain, Gram-negative type CFM90_23635 IPR023614 Porin domain superfamily CFM90_23635 IPR001702 Porin, Gram-negative type CFM90_23635 IPR002299 Porin, Neisseria sp. type CFM90_23640 IPR022893 Shikimate dehydrogenase family CFM90_23640 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CFM90_23640 IPR041121 SDH, C-terminal CFM90_23640 IPR036291 NAD(P)-binding domain superfamily CFM90_23645 IPR036441 Dehydroquinase, class II superfamily CFM90_23645 IPR001874 Dehydroquinase, class II CFM90_23645 IPR018509 Dehydroquinase, class II, conserved site CFM90_23650 IPR011701 Major facilitator superfamily CFM90_23650 IPR020846 Major facilitator superfamily domain CFM90_23650 IPR036259 MFS transporter superfamily CFM90_23655 IPR041474 HTH-type transcriptional repressor NicS, C-terminal CFM90_23655 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CFM90_23655 IPR001647 DNA-binding HTH domain, TetR-type CFM90_23655 IPR009057 Homeobox-like domain superfamily CFM90_23660 IPR006136 Flagellar biosynthetic protein FlhB CFM90_23660 IPR006135 Type III secretion system substrate exporter CFM90_23660 IPR029025 Type III secretion system substrate exporter, C-terminal CFM90_23665 IPR001712 Type III secretion system FHIPEP CFM90_23665 IPR042194 FHIPEP, domain 1 CFM90_23665 IPR006301 Flagellar biosynthesis protein FlhA CFM90_23665 IPR025505 FHIPEP conserved site CFM90_23665 IPR042193 FHIPEP, domain 3 CFM90_23665 IPR042196 FHIPEP, domain 4 CFM90_23670 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CFM90_23670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_23670 IPR020006 Flagellar biosynthesis protein FlhF CFM90_23670 IPR003593 AAA+ ATPase domain CFM90_23680 IPR028617 RNA polymerase sigma factor FliA CFM90_23680 IPR013324 RNA polymerase sigma factor, region 3/4-like CFM90_23680 IPR014284 RNA polymerase sigma-70 like domain CFM90_23680 IPR000943 RNA polymerase sigma-70 CFM90_23680 IPR007627 RNA polymerase sigma-70 region 2 CFM90_23680 IPR007624 RNA polymerase sigma-70 region 3 CFM90_23680 IPR013325 RNA polymerase sigma factor, region 2 CFM90_23680 IPR012845 RNA polymerase sigma factor, FliA/WhiG CFM90_23680 IPR007630 RNA polymerase sigma-70 region 4 CFM90_23685 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_23685 IPR001279 Metallo-beta-lactamase CFM90_23685 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D CFM90_23705 IPR003425 CCB3/YggT CFM90_23715 IPR015168 SsuA/THI5-like CFM90_23715 IPR010067 Aliphatic sulfonates-binding protein CFM90_23715 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_23725 IPR004624 PhnA protein CFM90_23725 IPR013988 PhnA protein, C-terminal CFM90_23725 IPR013987 PhnA protein, N-terminal CFM90_23730 IPR006258 Dihydrolipoamide dehydrogenase CFM90_23730 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CFM90_23730 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFM90_23730 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_23730 IPR023753 FAD/NAD(P)-binding domain CFM90_23730 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CFM90_23730 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CFM90_23745 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_23745 IPR000485 AsnC-type HTH domain CFM90_23745 IPR011008 Dimeric alpha-beta barrel CFM90_23745 IPR019888 Transcription regulator AsnC-type CFM90_23745 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_23745 IPR011991 ArsR-like helix-turn-helix domain CFM90_23745 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_23745 IPR036390 Winged helix DNA-binding domain superfamily CFM90_23760 IPR005565 Haemolysin activator HlyB, C-terminal CFM90_23760 IPR035251 ShlB, POTRA domain CFM90_23760 IPR034746 POTRA domain CFM90_23760 IPR013686 Polypeptide-transport-associated, ShlB-type CFM90_23760 IPR027282 Two partner secretion pathway transporter CFM90_23785 IPR012334 Pectin lyase fold CFM90_23785 IPR025157 Hemagglutinin repeat CFM90_23785 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CFM90_23785 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CFM90_23785 IPR008638 Filamentous haemagglutinin, N-terminal CFM90_23785 IPR025157 Hemagglutinin repeat CFM90_23785 IPR012334 Pectin lyase fold CFM90_23785 IPR011050 Pectin lyase fold/virulence factor CFM90_23785 IPR008638 Filamentous haemagglutinin, N-terminal CFM90_23785 IPR011050 Pectin lyase fold/virulence factor CFM90_23785 IPR006914 VENN motif-containing domain CFM90_23785 IPR006914 VENN motif-containing domain CFM90_23795 IPR008719 Nitrous oxide reductase accessory protein NosL CFM90_23800 IPR032688 ABC-2 family transporter protein CFM90_23805 IPR003439 ABC transporter-like CFM90_23805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_23805 IPR017871 ABC transporter, conserved site CFM90_23805 IPR003593 AAA+ ATPase domain CFM90_23810 IPR006633 Carbohydrate-binding/sugar hydrolysis domain CFM90_23810 IPR026464 Nitrous oxide reductase family maturation protein NosD CFM90_23810 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain CFM90_23810 IPR022441 Parallel beta-helix repeat-2 CFM90_23810 IPR006626 Parallel beta-helix repeat CFM90_23810 IPR012334 Pectin lyase fold CFM90_23810 IPR011050 Pectin lyase fold/virulence factor CFM90_23815 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_23815 IPR011399 Nitrous oxide reductase expression regulator NosR CFM90_23815 IPR007329 FMN-binding CFM90_23820 IPR041142 Nitrous oxide reductase, propeller repeat 2 CFM90_23820 IPR008972 Cupredoxin CFM90_23820 IPR041114 Nitrous oxide reductase, propeller repeat 1 CFM90_23820 IPR023644 Nitrous-oxide reductase CFM90_23820 IPR034205 Nitrous-oxide reductase, C-terminal CFM90_23820 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CFM90_23820 IPR011045 Nitrous oxide reductase, N-terminal CFM90_23820 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_23820 IPR028096 EfeO-type cupredoxin-like domain CFM90_23820 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CFM90_23835 IPR002123 Phospholipid/glycerol acyltransferase CFM90_23840 IPR011603 2-oxoglutarate dehydrogenase E1 component CFM90_23840 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain CFM90_23840 IPR005475 Transketolase-like, pyrimidine-binding domain CFM90_23840 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CFM90_23840 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CFM90_23840 IPR001017 Dehydrogenase, E1 component CFM90_23840 IPR029061 Thiamin diphosphate-binding fold CFM90_23845 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_23845 IPR003660 HAMP domain CFM90_23845 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_23845 IPR004090 Chemotaxis methyl-accepting receptor CFM90_23845 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_23845 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_23865 IPR008490 Transposase InsH, N-terminal CFM90_23865 IPR002559 Transposase, IS4-like CFM90_23870 IPR006175 YjgF/YER057c/UK114 family CFM90_23870 IPR035959 RutC-like superfamily CFM90_23870 IPR019898 Putative aminoacrylate peracid reductase RutC CFM90_23885 IPR011991 ArsR-like helix-turn-helix domain CFM90_23885 IPR001845 HTH ArsR-type DNA-binding domain CFM90_23885 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_23885 IPR036390 Winged helix DNA-binding domain superfamily CFM90_23895 IPR036291 NAD(P)-binding domain superfamily CFM90_23895 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_23895 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_23900 IPR011991 ArsR-like helix-turn-helix domain CFM90_23900 IPR019888 Transcription regulator AsnC-type CFM90_23900 IPR011008 Dimeric alpha-beta barrel CFM90_23900 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_23900 IPR036390 Winged helix DNA-binding domain superfamily CFM90_23900 IPR000485 AsnC-type HTH domain CFM90_23900 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CFM90_23900 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CFM90_23905 IPR005956 4-hydroxyphenylpyruvate dioxygenase CFM90_23905 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal CFM90_23905 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal CFM90_23905 IPR037523 Vicinal oxygen chelate (VOC) domain CFM90_23905 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CFM90_23905 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CFM90_23910 IPR035959 RutC-like superfamily CFM90_23910 IPR019897 RidA, conserved site CFM90_23910 IPR006175 YjgF/YER057c/UK114 family CFM90_23910 IPR006056 RidA family CFM90_23955 IPR002925 Dienelactone hydrolase CFM90_23955 IPR029058 Alpha/Beta hydrolase fold CFM90_23965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_23965 IPR030374 Polyamine biosynthesis domain CFM90_23965 IPR001045 Spermidine/spermine synthases CFM90_23970 IPR017871 ABC transporter, conserved site CFM90_23970 IPR003439 ABC transporter-like CFM90_23970 IPR003593 AAA+ ATPase domain CFM90_23970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_23970 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CFM90_23975 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFM90_23975 IPR003439 ABC transporter-like CFM90_23975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_23975 IPR017871 ABC transporter, conserved site CFM90_23975 IPR003593 AAA+ ATPase domain CFM90_23990 IPR000709 Leu/Ile/Val-binding protein CFM90_23990 IPR028082 Periplasmic binding protein-like I CFM90_23990 IPR028081 Leucine-binding protein domain CFM90_24010 IPR007140 Protein of unknown function DUF350 CFM90_24030 IPR017716 S-adenosylmethionine decarboxylase proenzyme CFM90_24030 IPR016067 S-adenosylmethionine decarboxylase, core CFM90_24030 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic CFM90_24035 IPR001082 Fimbrial protein pilin CFM90_24035 IPR012902 Prokaryotic N-terminal methylation site CFM90_24055 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CFM90_24055 IPR036465 von Willebrand factor A-like domain superfamily CFM90_24055 IPR008707 PilC beta-propeller domain CFM90_24060 IPR012902 Prokaryotic N-terminal methylation site CFM90_24060 IPR028188 Type IV pilin PilA CFM90_24065 IPR000843 LacI-type HTH domain CFM90_24065 IPR028082 Periplasmic binding protein-like I CFM90_24065 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_24070 IPR013013 Phosphotransferase system, EIIC component, type 1 CFM90_24070 IPR003352 Phosphotransferase system, EIIC CFM90_24070 IPR010973 Phosphotransferase system, sucrose-specific IIBC component CFM90_24070 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CFM90_24070 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CFM90_24070 IPR036878 Glucose permease domain IIB CFM90_24070 IPR001996 Phosphotransferase system, IIB component, type 1 CFM90_24075 IPR001362 Glycoside hydrolase, family 32 CFM90_24075 IPR006232 Sucrose-6-phosphate hydrolase CFM90_24075 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CFM90_24075 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CFM90_24075 IPR018053 Glycoside hydrolase, family 32, active site CFM90_24075 IPR013189 Glycosyl hydrolase family 32, C-terminal CFM90_24075 IPR013148 Glycosyl hydrolase family 32, N-terminal CFM90_24080 IPR023738 Maltoporin CFM90_24080 IPR036998 Porin, LamB-type superfamily CFM90_24080 IPR003192 Porin, LamB-type CFM90_24085 IPR035895 HPr-like superfamily CFM90_24085 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFM90_24085 IPR018274 PEP-utilising enzyme, active site CFM90_24085 IPR000121 PEP-utilising enzyme, C-terminal CFM90_24085 IPR023151 PEP-utilising enzyme, conserved site CFM90_24085 IPR036637 Phosphohistidine domain superfamily CFM90_24085 IPR016152 Phosphotransferase/anion transporter CFM90_24085 IPR006318 Phosphotransferase system, enzyme I-like CFM90_24085 IPR040442 Pyruvate kinase-like domain superfamily CFM90_24085 IPR008731 Phosphotransferase system, enzyme I N-terminal CFM90_24085 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CFM90_24085 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CFM90_24085 IPR036618 PtsI, HPr-binding domain superfamily CFM90_24085 IPR008279 PEP-utilising enzyme, mobile domain CFM90_24085 IPR002178 PTS EIIA type-2 domain CFM90_24085 IPR000032 Phosphocarrier protein HPr-like CFM90_24100 IPR000362 Fumarate lyase family CFM90_24100 IPR018951 Fumarase C, C-terminal CFM90_24100 IPR024083 Fumarase/histidase, N-terminal CFM90_24100 IPR005677 Fumarate hydratase, class II CFM90_24100 IPR008948 L-Aspartase-like CFM90_24100 IPR022761 Fumarate lyase, N-terminal CFM90_24100 IPR020557 Fumarate lyase, conserved site CFM90_24105 IPR023721 Multidrug resistance protein MdtD CFM90_24105 IPR036259 MFS transporter superfamily CFM90_24105 IPR020846 Major facilitator superfamily domain CFM90_24105 IPR011701 Major facilitator superfamily CFM90_24105 IPR004638 Drug resistance transporter EmrB-like CFM90_24120 IPR000212 DNA helicase, UvrD/REP type CFM90_24120 IPR013986 DExx box DNA helicase domain superfamily CFM90_24120 IPR005751 ATP-dependent DNA helicase PcrA CFM90_24120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_24120 IPR014016 UvrD-like helicase, ATP-binding domain CFM90_24120 IPR034739 UvrD/AddA helicase, N-terminal CFM90_24120 IPR014017 UvrD-like DNA helicase, C-terminal CFM90_24135 IPR003844 Uncharacterised protein family UPF0060 CFM90_24140 IPR008910 Conserved TM helix CFM90_24170 IPR002781 Transmembrane protein TauE-like CFM90_24175 IPR036390 Winged helix DNA-binding domain superfamily CFM90_24175 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24175 IPR000847 Transcription regulator HTH, LysR CFM90_24175 IPR005119 LysR, substrate-binding CFM90_24185 IPR042099 AMP-dependent synthetase-like superfamily CFM90_24185 IPR000873 AMP-dependent synthetase/ligase CFM90_24185 IPR020845 AMP-binding, conserved site CFM90_24185 IPR025110 AMP-binding enzyme, C-terminal domain CFM90_24190 IPR002781 Transmembrane protein TauE-like CFM90_24195 IPR005288 L-aspartate oxidase CFM90_24195 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CFM90_24195 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CFM90_24195 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_24195 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CFM90_24195 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CFM90_24215 IPR029039 Flavoprotein-like superfamily CFM90_24215 IPR023048 NADH-azoreductase, FMN-dependent CFM90_24215 IPR003680 Flavodoxin-like fold CFM90_24220 IPR005119 LysR, substrate-binding CFM90_24220 IPR000847 Transcription regulator HTH, LysR CFM90_24220 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24220 IPR036390 Winged helix DNA-binding domain superfamily CFM90_24225 IPR036259 MFS transporter superfamily CFM90_24225 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CFM90_24225 IPR005829 Sugar transporter, conserved site CFM90_24225 IPR011701 Major facilitator superfamily CFM90_24225 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24225 IPR020846 Major facilitator superfamily domain CFM90_24225 IPR036390 Winged helix DNA-binding domain superfamily CFM90_24235 IPR012893 HipA-like, C-terminal CFM90_24235 IPR017508 HipA, N-terminal subdomain 1 CFM90_24265 IPR009057 Homeobox-like domain superfamily CFM90_24265 IPR018060 DNA binding HTH domain, AraC-type CFM90_24265 IPR018062 HTH domain AraC-type, conserved site CFM90_24270 IPR006175 YjgF/YER057c/UK114 family CFM90_24270 IPR035959 RutC-like superfamily CFM90_24270 IPR019897 RidA, conserved site CFM90_24270 IPR006056 RidA family CFM90_24280 IPR003710 Ketopantoate reductase ApbA/PanE CFM90_24280 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFM90_24280 IPR036291 NAD(P)-binding domain superfamily CFM90_24280 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_24280 IPR013752 Ketopantoate reductase, C-terminal domain CFM90_24280 IPR013332 Ketopantoate reductase, N-terminal domain CFM90_24285 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CFM90_24290 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CFM90_24300 IPR011757 Lytic transglycosylase MltB CFM90_24300 IPR023346 Lysozyme-like domain superfamily CFM90_24300 IPR031304 Transglycosylase SLT domain 2 CFM90_24335 IPR000847 Transcription regulator HTH, LysR CFM90_24335 IPR037421 HTH-type transcriptional regulator ClcR, PBP2 domain CFM90_24335 IPR005119 LysR, substrate-binding CFM90_24335 IPR036390 Winged helix DNA-binding domain superfamily CFM90_24335 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24345 IPR024084 Isopropylmalate dehydrogenase-like domain CFM90_24345 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CFM90_24345 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CFM90_24345 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CFM90_24355 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CFM90_24355 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CFM90_24355 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase CFM90_24360 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CFM90_24360 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CFM90_24360 IPR037523 Vicinal oxygen chelate (VOC) domain CFM90_24365 IPR000073 Alpha/beta hydrolase fold-1 CFM90_24365 IPR029058 Alpha/Beta hydrolase fold CFM90_24380 IPR036661 Luciferase-like domain superfamily CFM90_24380 IPR011251 Luciferase-like domain CFM90_24390 IPR039657 Dimethylallyltransferase CFM90_24390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_24390 IPR002648 Adenylate dimethylallyltransferase CFM90_24395 IPR003660 HAMP domain CFM90_24395 IPR013655 PAS fold-3 CFM90_24395 IPR035965 PAS domain superfamily CFM90_24395 IPR000014 PAS domain CFM90_24395 IPR001610 PAC motif CFM90_24395 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_24395 IPR004090 Chemotaxis methyl-accepting receptor CFM90_24400 IPR011701 Major facilitator superfamily CFM90_24400 IPR020846 Major facilitator superfamily domain CFM90_24400 IPR036259 MFS transporter superfamily CFM90_24400 IPR004737 Nitrate transporter CFM90_24405 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CFM90_24405 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CFM90_24405 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CFM90_24405 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CFM90_24405 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CFM90_24405 IPR017121 Nitrite reductase [NAD(P)H], large subunit CFM90_24405 IPR023753 FAD/NAD(P)-binding domain CFM90_24405 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CFM90_24405 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_24405 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CFM90_24405 IPR007419 BFD-like [2Fe-2S]-binding domain CFM90_24410 IPR017881 Nitrite reductase (NADH) small subunit CFM90_24410 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type CFM90_24410 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CFM90_24415 IPR007419 BFD-like [2Fe-2S]-binding domain CFM90_24415 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CFM90_24415 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CFM90_24415 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CFM90_24415 IPR017121 Nitrite reductase [NAD(P)H], large subunit CFM90_24415 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CFM90_24415 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CFM90_24415 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CFM90_24415 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CFM90_24415 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CFM90_24415 IPR023753 FAD/NAD(P)-binding domain CFM90_24415 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_24420 IPR007419 BFD-like [2Fe-2S]-binding domain CFM90_24420 IPR009010 Aspartate decarboxylase-like domain superfamily CFM90_24420 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain CFM90_24420 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CFM90_24420 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CFM90_24420 IPR006657 Molybdopterin dinucleotide-binding domain CFM90_24420 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CFM90_24420 IPR006656 Molybdopterin oxidoreductase CFM90_24435 IPR002528 Multi antimicrobial extrusion protein CFM90_24450 IPR027379 Cardiolipin synthase N-terminal CFM90_24450 IPR001736 Phospholipase D/Transphosphatidylase CFM90_24450 IPR025202 Phospholipase D-like domain CFM90_24450 IPR022924 Cardiolipin synthase CFM90_24450 IPR030840 Cardiolipin synthase A CFM90_24460 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_24460 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_24460 IPR003660 HAMP domain CFM90_24460 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_24460 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_24460 IPR004090 Chemotaxis methyl-accepting receptor CFM90_24465 IPR005330 MHYT domain CFM90_24465 IPR035965 PAS domain superfamily CFM90_24465 IPR001633 EAL domain CFM90_24465 IPR029787 Nucleotide cyclase CFM90_24465 IPR000160 GGDEF domain CFM90_24465 IPR035919 EAL domain superfamily CFM90_24465 IPR000014 PAS domain CFM90_24470 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CFM90_24475 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CFM90_24490 IPR000160 GGDEF domain CFM90_24490 IPR035919 EAL domain superfamily CFM90_24490 IPR029787 Nucleotide cyclase CFM90_24490 IPR001633 EAL domain CFM90_24490 IPR005330 MHYT domain CFM90_24500 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_24500 IPR003423 Outer membrane efflux protein CFM90_24505 IPR023931 Multidrug resistance protein MdtC CFM90_24505 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_24505 IPR001036 Acriflavin resistance protein CFM90_24510 IPR001036 Acriflavin resistance protein CFM90_24510 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_24510 IPR022831 Multidrug resistance protein MdtB CFM90_24515 IPR006143 RND efflux pump, membrane fusion protein CFM90_24515 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CFM90_24515 IPR022824 Multidrug resistance protein MdtA CFM90_24520 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_24520 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_24520 IPR001789 Signal transduction response regulator, receiver domain CFM90_24520 IPR039420 Transcriptional regulatory protein WalR-like CFM90_24520 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24520 IPR011006 CheY-like superfamily CFM90_24525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_24525 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_24525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_24525 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_24525 IPR003660 HAMP domain CFM90_24525 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_24525 IPR005467 Histidine kinase domain CFM90_24535 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase CFM90_24535 IPR003342 Glycosyl transferase family 39/83 CFM90_24540 IPR000792 Transcription regulator LuxR, C-terminal CFM90_24540 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_24540 IPR011006 CheY-like superfamily CFM90_24540 IPR001789 Signal transduction response regulator, receiver domain CFM90_24545 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CFM90_24545 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CFM90_24550 IPR000887 KDPG/KHG aldolase CFM90_24550 IPR031338 KDPG/KHG aldolase, active site 2 CFM90_24550 IPR031337 KDPG/KHG aldolase, active site 1 CFM90_24550 IPR013785 Aldolase-type TIM barrel CFM90_24555 IPR003474 Gluconate transporter CFM90_24565 IPR013108 Amidohydrolase 3 CFM90_24565 IPR032466 Metal-dependent hydrolase CFM90_24565 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFM90_24565 IPR023100 D-aminoacylase, insert domain superfamily CFM90_24585 IPR006144 Secretion protein HlyD, conserved site CFM90_24585 IPR010129 Type I secretion membrane fusion protein, HlyD family CFM90_24590 IPR005074 Peptidase C39, bacteriocin processing CFM90_24590 IPR039395 Peptidase C39-like A CFM90_24590 IPR039421 Type I protein exporter CFM90_24590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_24590 IPR010132 ATPase, type I secretion system, HlyB CFM90_24590 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFM90_24590 IPR003439 ABC transporter-like CFM90_24590 IPR011527 ABC transporter type 1, transmembrane domain CFM90_24590 IPR003593 AAA+ ATPase domain CFM90_24590 IPR017871 ABC transporter, conserved site CFM90_24620 IPR036641 HPT domain superfamily CFM90_24620 IPR000014 PAS domain CFM90_24620 IPR000700 PAS-associated, C-terminal CFM90_24620 IPR035965 PAS domain superfamily CFM90_24620 IPR013767 PAS fold CFM90_24620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_24620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_24620 IPR005467 Histidine kinase domain CFM90_24620 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_24620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_24620 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_24620 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CFM90_24620 IPR001789 Signal transduction response regulator, receiver domain CFM90_24620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_24620 IPR011006 CheY-like superfamily CFM90_24645 IPR017850 Alkaline-phosphatase-like, core domain superfamily CFM90_24645 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_24645 IPR007312 Phosphoesterase CFM90_24650 IPR036909 Cytochrome c-like domain superfamily CFM90_24650 IPR004852 Di-haem cytochrome c peroxidase CFM90_24650 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CFM90_24650 IPR009056 Cytochrome c-like domain CFM90_24655 IPR005170 Transporter-associated domain CFM90_24655 IPR005496 Integral membrane protein TerC CFM90_24655 IPR016169 FAD-binding, type PCMH, subdomain 2 CFM90_24655 IPR036318 FAD-binding, type PCMH-like superfamily CFM90_24655 IPR000644 CBS domain CFM90_24675 IPR036909 Cytochrome c-like domain superfamily CFM90_24675 IPR009056 Cytochrome c-like domain CFM90_24680 IPR036188 FAD/NAD(P)-binding domain superfamily CFM90_24680 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CFM90_24705 IPR005467 Histidine kinase domain CFM90_24705 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_24705 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_24705 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFM90_24705 IPR003660 HAMP domain CFM90_24705 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_24705 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_24710 IPR001789 Signal transduction response regulator, receiver domain CFM90_24710 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24710 IPR039420 Transcriptional regulatory protein WalR-like CFM90_24710 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_24710 IPR011006 CheY-like superfamily CFM90_24710 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_24725 IPR010696 Protein of unknown function DUF1272 CFM90_24745 IPR035965 PAS domain superfamily CFM90_24745 IPR029787 Nucleotide cyclase CFM90_24745 IPR005330 MHYT domain CFM90_24745 IPR000160 GGDEF domain CFM90_24745 IPR001633 EAL domain CFM90_24745 IPR035919 EAL domain superfamily CFM90_24755 IPR036390 Winged helix DNA-binding domain superfamily CFM90_24755 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_24755 IPR016462 Molybdate-dependent transcriptional regulator ModE CFM90_24755 IPR003725 Molybdenum-binding protein ModE, N-terminal CFM90_24755 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24755 IPR000847 Transcription regulator HTH, LysR CFM90_24755 IPR005116 Transport-associated OB, type 1 CFM90_24755 IPR004606 Molybdenum-pterin binding CFM90_24760 IPR014347 Tautomerase/MIF superfamily CFM90_24760 IPR004370 4-oxalocrotonate tautomerase CFM90_24765 IPR000073 Alpha/beta hydrolase fold-1 CFM90_24765 IPR029058 Alpha/Beta hydrolase fold CFM90_24775 IPR000847 Transcription regulator HTH, LysR CFM90_24775 IPR005119 LysR, substrate-binding CFM90_24775 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24775 IPR036390 Winged helix DNA-binding domain superfamily CFM90_24780 IPR005666 Sulphate transport system permease protein 1 CFM90_24780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_24780 IPR008995 Molybdate/tungstate binding, C-terminal CFM90_24780 IPR013611 Transport-associated OB, type 2 CFM90_24780 IPR003593 AAA+ ATPase domain CFM90_24780 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CFM90_24780 IPR017871 ABC transporter, conserved site CFM90_24780 IPR003439 ABC transporter-like CFM90_24785 IPR035906 MetI-like superfamily CFM90_24785 IPR011867 Molybdate ABC transporter, permease protein CFM90_24785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_24790 IPR015868 Glutaminase CFM90_24790 IPR012338 Beta-lactamase/transpeptidase-like CFM90_24795 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_24795 IPR011006 CheY-like superfamily CFM90_24795 IPR000792 Transcription regulator LuxR, C-terminal CFM90_24795 IPR001789 Signal transduction response regulator, receiver domain CFM90_24800 IPR000792 Transcription regulator LuxR, C-terminal CFM90_24800 IPR011006 CheY-like superfamily CFM90_24800 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_24800 IPR001789 Signal transduction response regulator, receiver domain CFM90_24805 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_24810 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CFM90_24810 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CFM90_24810 IPR006531 Gp5 N-terminal CFM90_24810 IPR037026 Vgr protein, OB-fold domain superfamily CFM90_24820 IPR031325 RHS repeat CFM90_24820 IPR022385 Rhs repeat-associated core CFM90_24820 IPR001826 RHS protein CFM90_24820 IPR006530 YD repeat CFM90_24835 IPR020941 Suppressor of fused-like domain CFM90_24850 IPR036390 Winged helix DNA-binding domain superfamily CFM90_24850 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24850 IPR001845 HTH ArsR-type DNA-binding domain CFM90_24850 IPR011991 ArsR-like helix-turn-helix domain CFM90_24850 IPR018334 ArsR-type transcription regulator, HTH motif CFM90_24855 IPR023485 Phosphotyrosine protein phosphatase I CFM90_24855 IPR014064 Arsenate reductase ArsC CFM90_24855 IPR036196 Phosphotyrosine protein phosphatase I superfamily CFM90_24860 IPR034294 Aquaporin transporter CFM90_24860 IPR000425 Major intrinsic protein CFM90_24860 IPR023271 Aquaporin-like CFM90_24860 IPR023743 Aquaporin Z CFM90_24860 IPR022357 Major intrinsic protein, conserved site CFM90_24865 IPR000847 Transcription regulator HTH, LysR CFM90_24865 IPR005119 LysR, substrate-binding CFM90_24865 IPR036390 Winged helix DNA-binding domain superfamily CFM90_24865 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24870 IPR036291 NAD(P)-binding domain superfamily CFM90_24870 IPR011032 GroES-like superfamily CFM90_24870 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CFM90_24870 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CFM90_24870 IPR020843 Polyketide synthase, enoylreductase domain CFM90_24870 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_24870 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_24875 IPR036291 NAD(P)-binding domain superfamily CFM90_24875 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_24875 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_24880 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D CFM90_24880 IPR001279 Metallo-beta-lactamase CFM90_24880 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFM90_24885 IPR001647 DNA-binding HTH domain, TetR-type CFM90_24885 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CFM90_24885 IPR009057 Homeobox-like domain superfamily CFM90_24895 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_24895 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_24895 IPR036291 NAD(P)-binding domain superfamily CFM90_24920 IPR020843 Polyketide synthase, enoylreductase domain CFM90_24920 IPR036291 NAD(P)-binding domain superfamily CFM90_24920 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CFM90_24920 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_24920 IPR011032 GroES-like superfamily CFM90_24920 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_24930 IPR036390 Winged helix DNA-binding domain superfamily CFM90_24930 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24930 IPR000847 Transcription regulator HTH, LysR CFM90_24930 IPR005119 LysR, substrate-binding CFM90_24940 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFM90_24940 IPR016039 Thiolase-like CFM90_24940 IPR009081 Phosphopantetheine binding ACP domain CFM90_24940 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CFM90_24940 IPR013968 Polyketide synthase, ketoreductase domain CFM90_24940 IPR020843 Polyketide synthase, enoylreductase domain CFM90_24940 IPR042104 Polyketide synthase, dehydratase domain superfamily CFM90_24940 IPR020807 Polyketide synthase, dehydratase domain CFM90_24940 IPR032821 Ketoacyl-synthetase, C-terminal extension CFM90_24940 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_24940 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CFM90_24940 IPR014030 Beta-ketoacyl synthase, N-terminal CFM90_24940 IPR014031 Beta-ketoacyl synthase, C-terminal CFM90_24940 IPR018201 Beta-ketoacyl synthase, active site CFM90_24940 IPR011032 GroES-like superfamily CFM90_24940 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_24940 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CFM90_24940 IPR036291 NAD(P)-binding domain superfamily CFM90_24940 IPR014043 Acyl transferase CFM90_24940 IPR036736 ACP-like superfamily CFM90_24940 IPR001227 Acyl transferase domain superfamily CFM90_24950 IPR002539 MaoC-like dehydratase domain CFM90_24950 IPR029069 HotDog domain superfamily CFM90_24955 IPR002577 Helix-turn-helix, HxlR type CFM90_24955 IPR011991 ArsR-like helix-turn-helix domain CFM90_24955 IPR036390 Winged helix DNA-binding domain superfamily CFM90_24955 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_24975 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CFM90_24975 IPR026273 Low specificity L-threonine aldolase CFM90_24975 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_24975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_24975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_24980 IPR009057 Homeobox-like domain superfamily CFM90_24980 IPR011051 RmlC-like cupin domain superfamily CFM90_24980 IPR014710 RmlC-like jelly roll fold CFM90_24980 IPR018060 DNA binding HTH domain, AraC-type CFM90_24980 IPR020449 Transcription regulator HTH, AraC- type CFM90_24980 IPR018062 HTH domain AraC-type, conserved site CFM90_24985 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_24985 IPR003423 Outer membrane efflux protein CFM90_24990 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CFM90_24990 IPR001036 Acriflavin resistance protein CFM90_24990 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_24995 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFM90_24995 IPR006143 RND efflux pump, membrane fusion protein CFM90_24995 IPR022824 Multidrug resistance protein MdtA CFM90_25000 IPR013094 Alpha/beta hydrolase fold-3 CFM90_25000 IPR029058 Alpha/Beta hydrolase fold CFM90_25005 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_25005 IPR000847 Transcription regulator HTH, LysR CFM90_25005 IPR005119 LysR, substrate-binding CFM90_25005 IPR036390 Winged helix DNA-binding domain superfamily CFM90_25015 IPR029058 Alpha/Beta hydrolase fold CFM90_25015 IPR013094 Alpha/beta hydrolase fold-3 CFM90_25020 IPR019953 Organic hydroperoxide resistance protein famiy CFM90_25020 IPR036102 OsmC/Ohr superfamily CFM90_25020 IPR003718 OsmC/Ohr family CFM90_25020 IPR015946 K homology domain-like, alpha/beta CFM90_25025 IPR000835 MarR-type HTH domain CFM90_25025 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_25025 IPR036390 Winged helix DNA-binding domain superfamily CFM90_25030 IPR012766 Alpha,alpha-trehalose-phosphate synthase CFM90_25030 IPR001830 Glycosyl transferase, family 20 CFM90_25035 IPR006379 HAD-superfamily hydrolase, subfamily IIB CFM90_25035 IPR036412 HAD-like superfamily CFM90_25035 IPR023214 HAD superfamily CFM90_25035 IPR003337 Trehalose-phosphatase CFM90_25045 IPR016040 NAD(P)-binding domain CFM90_25045 IPR036291 NAD(P)-binding domain superfamily CFM90_25045 IPR005886 UDP-glucose 4-epimerase CFM90_25055 IPR004090 Chemotaxis methyl-accepting receptor CFM90_25055 IPR033480 Single Cache domain 2 CFM90_25055 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_25055 IPR003660 HAMP domain CFM90_25065 IPR001633 EAL domain CFM90_25065 IPR035919 EAL domain superfamily CFM90_25065 IPR029787 Nucleotide cyclase CFM90_25065 IPR005330 MHYT domain CFM90_25065 IPR000160 GGDEF domain CFM90_25070 IPR000792 Transcription regulator LuxR, C-terminal CFM90_25070 IPR011006 CheY-like superfamily CFM90_25070 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_25070 IPR001789 Signal transduction response regulator, receiver domain CFM90_25110 IPR004846 Type II/III secretion system CFM90_25110 IPR032789 Pilus formation protein, N-terminal CFM90_25110 IPR007055 BON domain CFM90_25110 IPR014004 Transport-associated and nodulation domain, bacteria CFM90_25110 IPR001775 GspD/PilQ family CFM90_25120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_25120 IPR022399 Helicase/secretion neighbourhood ATPase CFM90_25120 IPR001482 Type II/IV secretion system protein CFM90_25150 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_25150 IPR002197 DNA binding HTH domain, Fis-type CFM90_25150 IPR009057 Homeobox-like domain superfamily CFM90_25150 IPR011006 CheY-like superfamily CFM90_25150 IPR003593 AAA+ ATPase domain CFM90_25150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_25150 IPR025944 Sigma-54 interaction domain, conserved site CFM90_25150 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_25150 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_25150 IPR001789 Signal transduction response regulator, receiver domain CFM90_25165 IPR000683 Oxidoreductase, N-terminal CFM90_25165 IPR004104 Oxidoreductase, C-terminal CFM90_25165 IPR036291 NAD(P)-binding domain superfamily CFM90_25165 IPR008354 Glucose-fructose oxidoreductase, bacterial CFM90_25165 IPR006311 Twin-arginine translocation pathway, signal sequence CFM90_25215 IPR010105 TonB-dependent siderophore receptor CFM90_25215 IPR037066 TonB-dependent receptor, plug domain superfamily CFM90_25215 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFM90_25215 IPR000531 TonB-dependent receptor-like, beta-barrel CFM90_25215 IPR039423 TonB-dependent receptor-like CFM90_25215 IPR012910 TonB-dependent receptor, plug domain CFM90_25220 IPR000683 Oxidoreductase, N-terminal CFM90_25220 IPR036291 NAD(P)-binding domain superfamily CFM90_25220 IPR004104 Oxidoreductase, C-terminal CFM90_25230 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_25230 IPR036291 NAD(P)-binding domain superfamily CFM90_25230 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_25230 IPR011294 3-hydroxybutyrate dehydrogenase CFM90_25235 IPR023375 Acetoacetate decarboxylase domain superfamily CFM90_25235 IPR010451 Acetoacetate decarboxylase CFM90_25235 IPR023653 Acetoacetate decarboxylase, bacterial CFM90_25240 IPR000524 Transcription regulator HTH, GntR CFM90_25240 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_25240 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_25240 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_25240 IPR036390 Winged helix DNA-binding domain superfamily CFM90_25240 IPR004839 Aminotransferase, class I/classII CFM90_25240 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_25245 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_25245 IPR005814 Aminotransferase class-III CFM90_25245 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_25245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_25250 IPR010061 Methylmalonate-semialdehyde dehydrogenase CFM90_25250 IPR015590 Aldehyde dehydrogenase domain CFM90_25250 IPR016160 Aldehyde dehydrogenase, cysteine active site CFM90_25250 IPR016163 Aldehyde dehydrogenase, C-terminal CFM90_25250 IPR016162 Aldehyde dehydrogenase, N-terminal CFM90_25250 IPR016161 Aldehyde/histidinol dehydrogenase CFM90_25260 IPR011129 Cold shock domain CFM90_25260 IPR002059 Cold-shock protein, DNA-binding CFM90_25260 IPR012340 Nucleic acid-binding, OB-fold CFM90_25260 IPR012156 Cold shock, CspA CFM90_25260 IPR019844 Cold-shock (CSD) domain CFM90_25265 IPR003855 Potassium transporter CFM90_25265 IPR023051 Potassium uptake protein, low affinity, Kup CFM90_25270 IPR035965 PAS domain superfamily CFM90_25270 IPR000014 PAS domain CFM90_25270 IPR001633 EAL domain CFM90_25270 IPR005330 MHYT domain CFM90_25270 IPR000160 GGDEF domain CFM90_25270 IPR035919 EAL domain superfamily CFM90_25270 IPR029787 Nucleotide cyclase CFM90_25275 IPR003786 Sulfur carrier protein FdhD CFM90_25275 IPR016193 Cytidine deaminase-like CFM90_25285 IPR010046 Oxidoreductase alpha (molybdopterin) subunit CFM90_25285 IPR006656 Molybdopterin oxidoreductase CFM90_25285 IPR037951 YdeP-like, MopB domain CFM90_25285 IPR009010 Aspartate decarboxylase-like domain superfamily CFM90_25285 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain CFM90_25290 IPR011701 Major facilitator superfamily CFM90_25290 IPR020846 Major facilitator superfamily domain CFM90_25290 IPR036259 MFS transporter superfamily CFM90_25290 IPR026355 Oxalate/formate antiporter CFM90_25290 IPR004741 Oxalate/formate antiporter family transporter CFM90_25310 IPR008490 Transposase InsH, N-terminal CFM90_25310 IPR002559 Transposase, IS4-like CFM90_25315 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFM90_25315 IPR003660 HAMP domain CFM90_25315 IPR005467 Histidine kinase domain CFM90_25315 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_25315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_25315 IPR006290 Heavy metal sensor kinase CFM90_25315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFM90_25320 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_25320 IPR001789 Signal transduction response regulator, receiver domain CFM90_25320 IPR011006 CheY-like superfamily CFM90_25320 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_25320 IPR039420 Transcriptional regulatory protein WalR-like CFM90_25325 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFM90_25325 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB CFM90_25325 IPR006143 RND efflux pump, membrane fusion protein CFM90_25330 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_25330 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CFM90_25330 IPR001036 Acriflavin resistance protein CFM90_25335 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFM90_25335 IPR003423 Outer membrane efflux protein CFM90_25355 IPR007801 Uncharacterised protein family UPF0276 CFM90_25355 IPR036237 Xylose isomerase-like superfamily CFM90_25370 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase CFM90_25370 IPR011201 Zinc-ribbon domain, bacteria CFM90_25395 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CFM90_25395 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CFM90_25395 IPR003660 HAMP domain CFM90_25395 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFM90_25395 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CFM90_25395 IPR004090 Chemotaxis methyl-accepting receptor CFM90_25440 IPR003715 Polysaccharide export protein CFM90_25440 IPR019554 Soluble ligand binding domain CFM90_25445 IPR023485 Phosphotyrosine protein phosphatase I CFM90_25445 IPR036196 Phosphotyrosine protein phosphatase I superfamily CFM90_25445 IPR017867 Protein-tyrosine phosphatase, low molecular weight CFM90_25450 IPR025669 AAA domain CFM90_25450 IPR003856 Polysaccharide chain length determinant N-terminal domain CFM90_25450 IPR005700 Exopolysaccharide biosynthesis protein ExoP-like CFM90_25450 IPR005702 Exopolysaccharide synthesis protein CFM90_25450 IPR032807 Tyrosine kinase, G-rich domain CFM90_25450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_25455 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CFM90_25455 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CFM90_25460 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFM90_25460 IPR036291 NAD(P)-binding domain superfamily CFM90_25460 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CFM90_25460 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CFM90_25460 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CFM90_25460 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CFM90_25460 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CFM90_25460 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CFM90_25480 IPR018357 Hexapeptide transferase, conserved site CFM90_25480 IPR024688 Maltose/galactoside acetyltransferase CFM90_25480 IPR011004 Trimeric LpxA-like superfamily CFM90_25480 IPR001451 Hexapeptide repeat CFM90_25485 IPR036291 NAD(P)-binding domain superfamily CFM90_25485 IPR000683 Oxidoreductase, N-terminal CFM90_25485 IPR004104 Oxidoreductase, C-terminal CFM90_25500 IPR003362 Bacterial sugar transferase CFM90_25505 IPR001451 Hexapeptide repeat CFM90_25505 IPR041561 PglD, N-terminal CFM90_25505 IPR011004 Trimeric LpxA-like superfamily CFM90_25505 IPR020019 Sialic acid O-acyltransferase NeuD-like CFM90_25510 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFM90_25510 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_25510 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_25510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_25525 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFM90_25525 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CFM90_25525 IPR036291 NAD(P)-binding domain superfamily CFM90_25530 IPR025668 Transposase DDE domain CFM90_25560 IPR036390 Winged helix DNA-binding domain superfamily CFM90_25560 IPR000847 Transcription regulator HTH, LysR CFM90_25560 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_25560 IPR005119 LysR, substrate-binding CFM90_25565 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CFM90_25565 IPR011829 Tartrate dehydrogenase CFM90_25565 IPR024084 Isopropylmalate dehydrogenase-like domain CFM90_25570 IPR018107 Sodium:dicarboxylate symporter, conserved site CFM90_25570 IPR001991 Sodium:dicarboxylate symporter CFM90_25570 IPR023954 C4-dicarboxylate transport protein CFM90_25570 IPR036458 Sodium:dicarboxylate symporter superfamily CFM90_25575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_25575 IPR004602 UvrABC system subunit A CFM90_25575 IPR041552 UvrA DNA-binding domain CFM90_25575 IPR003439 ABC transporter-like CFM90_25575 IPR003593 AAA+ ATPase domain CFM90_25575 IPR017871 ABC transporter, conserved site CFM90_25575 IPR041102 UvrA, interaction domain CFM90_25580 IPR000883 Cytochrome c oxidase subunit I CFM90_25580 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CFM90_25580 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CFM90_25580 IPR023616 Cytochrome c oxidase-like, subunit I domain CFM90_25580 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CFM90_25590 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit CFM90_25590 IPR036909 Cytochrome c-like domain superfamily CFM90_25590 IPR009056 Cytochrome c-like domain CFM90_25595 IPR003782 Copper chaperone SCO1/SenC CFM90_25595 IPR036249 Thioredoxin-like superfamily CFM90_25595 IPR013766 Thioredoxin domain CFM90_25610 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CFM90_25610 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CFM90_25610 IPR039697 Iron-type alcohol dehydrogenase-like CFM90_25615 IPR011701 Major facilitator superfamily CFM90_25615 IPR036259 MFS transporter superfamily CFM90_25615 IPR004736 MFS transporter, metabolite:H symporter CFM90_25615 IPR005829 Sugar transporter, conserved site CFM90_25615 IPR020846 Major facilitator superfamily domain CFM90_25615 IPR005828 Major facilitator, sugar transporter-like CFM90_25620 IPR036206 Thiamin phosphate synthase superfamily CFM90_25620 IPR022998 Thiamine phosphate synthase/TenI CFM90_25620 IPR034291 Thiamine phosphate synthase CFM90_25620 IPR013785 Aldolase-type TIM barrel CFM90_25640 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_25640 IPR011006 CheY-like superfamily CFM90_25640 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_25640 IPR001789 Signal transduction response regulator, receiver domain CFM90_25640 IPR000792 Transcription regulator LuxR, C-terminal CFM90_25645 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_25645 IPR003660 HAMP domain CFM90_25645 IPR042295 NarX-like, N-terminal domain superfamily CFM90_25645 IPR029095 NarX-like, N-terminal CFM90_25645 IPR005467 Histidine kinase domain CFM90_25645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_25645 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CFM90_25645 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing CFM90_25650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_25650 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CFM90_25655 IPR023234 NarG-like domain CFM90_25655 IPR036197 NarG-like superfamily CFM90_25655 IPR003816 Nitrate reductase, gamma subunit CFM90_25660 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 CFM90_25660 IPR036411 TorD-like superfamily CFM90_25660 IPR003765 Nitrate reductase chaperone, NarJ CFM90_25660 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 CFM90_25660 IPR020945 DMSO/Nitrate reductase chaperone CFM90_25665 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFM90_25665 IPR029263 Respiratory nitrate reductase beta, C-terminal CFM90_25665 IPR006547 Nitrate reductase, beta subunit CFM90_25665 IPR038262 Nitrate reductase beta, C-terminal domain superfamily CFM90_25670 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CFM90_25670 IPR028189 Nitrate reductase, alpha subunit, N-terminal CFM90_25670 IPR006468 Nitrate reductase, alpha subunit CFM90_25670 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CFM90_25670 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CFM90_25670 IPR006656 Molybdopterin oxidoreductase CFM90_25670 IPR037943 Nitrate reductase alpha subunit-like, MopB domain CFM90_25670 IPR006657 Molybdopterin dinucleotide-binding domain CFM90_25670 IPR009010 Aspartate decarboxylase-like domain superfamily CFM90_25675 IPR036259 MFS transporter superfamily CFM90_25675 IPR004737 Nitrate transporter CFM90_25675 IPR011701 Major facilitator superfamily CFM90_25680 IPR036259 MFS transporter superfamily CFM90_25680 IPR020846 Major facilitator superfamily domain CFM90_25680 IPR011701 Major facilitator superfamily CFM90_25725 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFM90_25725 IPR001387 Cro/C1-type helix-turn-helix domain CFM90_25725 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain CFM90_25725 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily CFM90_25730 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase CFM90_25730 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CFM90_25730 IPR004839 Aminotransferase, class I/classII CFM90_25730 IPR015424 Pyridoxal phosphate-dependent transferase CFM90_25730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFM90_25730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFM90_25735 IPR036291 NAD(P)-binding domain superfamily CFM90_25735 IPR001509 NAD-dependent epimerase/dehydratase CFM90_25740 IPR003018 GAF domain CFM90_25740 IPR029016 GAF-like domain superfamily CFM90_25740 IPR002197 DNA binding HTH domain, Fis-type CFM90_25740 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_25740 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFM90_25740 IPR002078 RNA polymerase sigma factor 54 interaction domain CFM90_25740 IPR025944 Sigma-54 interaction domain, conserved site CFM90_25740 IPR009057 Homeobox-like domain superfamily CFM90_25740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_25740 IPR003593 AAA+ ATPase domain CFM90_25745 IPR012312 Haemerythrin-like CFM90_25745 IPR023742 Iron-sulfur cluster repair protein YftE CFM90_25745 IPR019903 Repair of iron centres family CFM90_25785 IPR001702 Porin, Gram-negative type CFM90_25785 IPR002299 Porin, Neisseria sp. type CFM90_25785 IPR033900 Porin domain, Gram-negative type CFM90_25785 IPR023614 Porin domain superfamily CFM90_25790 IPR029035 DHS-like NAD/FAD-binding domain superfamily CFM90_25790 IPR012136 NADP transhydrogenase, beta subunit CFM90_25790 IPR034300 NADP transhydrogenase beta-like domain CFM90_25795 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CFM90_25800 IPR036291 NAD(P)-binding domain superfamily CFM90_25800 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CFM90_25800 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CFM90_25800 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CFM90_25800 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CFM90_25805 IPR036291 NAD(P)-binding domain superfamily CFM90_25805 IPR011032 GroES-like superfamily CFM90_25805 IPR013154 Alcohol dehydrogenase, N-terminal CFM90_25805 IPR013149 Alcohol dehydrogenase, C-terminal CFM90_25810 IPR036291 NAD(P)-binding domain superfamily CFM90_25810 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_25810 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_25815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_25815 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CFM90_25820 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFM90_25820 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CFM90_25820 IPR036291 NAD(P)-binding domain superfamily CFM90_25820 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CFM90_25820 IPR023756 Glyoxylate/hydroxypyruvate reductase B CFM90_25825 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CFM90_25825 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CFM90_25835 IPR036390 Winged helix DNA-binding domain superfamily CFM90_25835 IPR005119 LysR, substrate-binding CFM90_25835 IPR000847 Transcription regulator HTH, LysR CFM90_25835 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_25840 IPR001249 Acetyl-CoA biotin carboxyl carrier CFM90_25840 IPR001882 Biotin-binding site CFM90_25840 IPR000089 Biotin/lipoyl attachment CFM90_25840 IPR011053 Single hybrid motif CFM90_25845 IPR016185 Pre-ATP-grasp domain superfamily CFM90_25845 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CFM90_25845 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CFM90_25845 IPR005482 Biotin carboxylase, C-terminal CFM90_25845 IPR011764 Biotin carboxylation domain CFM90_25845 IPR005481 Biotin carboxylase-like, N-terminal domain CFM90_25845 IPR011761 ATP-grasp fold CFM90_25845 IPR013815 ATP-grasp fold, subdomain 1 CFM90_25845 IPR011054 Rudiment single hybrid motif CFM90_25850 IPR010016 KipI family CFM90_25850 IPR029000 Cyclophilin-like domain superfamily CFM90_25850 IPR003833 Carboxyltransferase domain, subdomain C and D CFM90_25855 IPR029000 Cyclophilin-like domain superfamily CFM90_25855 IPR003778 Carboxyltransferase domain, subdomain A and B CFM90_25865 IPR005501 LamB/YcsF/PxpA-like CFM90_25865 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CFM90_25870 IPR036291 NAD(P)-binding domain superfamily CFM90_25870 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFM90_25870 IPR002347 Short-chain dehydrogenase/reductase SDR CFM90_25875 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFM90_25875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_25875 IPR035906 MetI-like superfamily CFM90_25880 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFM90_25880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFM90_25880 IPR035906 MetI-like superfamily CFM90_25885 IPR003439 ABC transporter-like CFM90_25885 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFM90_25885 IPR017871 ABC transporter, conserved site CFM90_25885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_25885 IPR003593 AAA+ ATPase domain CFM90_25890 IPR001320 Ionotropic glutamate receptor CFM90_25890 IPR018313 Solute-binding protein family 3, conserved site CFM90_25890 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFM90_25890 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CFM90_25905 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFM90_25905 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CFM90_25905 IPR001036 Acriflavin resistance protein CFM90_25910 IPR006143 RND efflux pump, membrane fusion protein CFM90_25910 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFM90_25940 IPR012337 Ribonuclease H-like superfamily CFM90_25940 IPR009057 Homeobox-like domain superfamily CFM90_25940 IPR036397 Ribonuclease H superfamily CFM90_25940 IPR001584 Integrase, catalytic core CFM90_25950 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_25950 IPR039420 Transcriptional regulatory protein WalR-like CFM90_25950 IPR001867 OmpR/PhoB-type DNA-binding domain CFM90_25950 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_25950 IPR001789 Signal transduction response regulator, receiver domain CFM90_25950 IPR011006 CheY-like superfamily CFM90_25965 IPR031107 Small heat shock protein HSP20 CFM90_25965 IPR002068 Alpha crystallin/Hsp20 domain CFM90_25965 IPR008978 HSP20-like chaperone CFM90_25970 IPR008978 HSP20-like chaperone CFM90_25970 IPR031107 Small heat shock protein HSP20 CFM90_25970 IPR002068 Alpha crystallin/Hsp20 domain CFM90_25980 IPR012725 Chaperone DnaK CFM90_25980 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CFM90_25980 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CFM90_25980 IPR013126 Heat shock protein 70 family CFM90_25980 IPR018181 Heat shock protein 70, conserved site CFM90_26010 IPR011032 GroES-like superfamily CFM90_26010 IPR037124 GroES chaperonin superfamily CFM90_26010 IPR018369 Chaperonin GroES, conserved site CFM90_26010 IPR020818 GroES chaperonin family CFM90_26015 IPR002423 Chaperonin Cpn60/TCP-1 family CFM90_26015 IPR027409 GroEL-like apical domain superfamily CFM90_26015 IPR027413 GroEL-like equatorial domain superfamily CFM90_26015 IPR001844 Chaperonin Cpn60 CFM90_26015 IPR018370 Chaperonin Cpn60, conserved site CFM90_26015 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CFM90_26025 IPR006050 DNA photolyase, N-terminal CFM90_26025 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily CFM90_26025 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CFM90_26025 IPR002081 Cryptochrome/DNA photolyase class 1 CFM90_26025 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CFM90_26025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFM90_26025 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily CFM90_26035 IPR028190 Novel toxin 21 CFM90_26035 IPR012334 Pectin lyase fold CFM90_26035 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CFM90_26035 IPR008619 Filamentous haemagglutinin repeat CFM90_26035 IPR008638 Filamentous haemagglutinin, N-terminal CFM90_26035 IPR011050 Pectin lyase fold/virulence factor CFM90_26035 IPR006914 VENN motif-containing domain CFM90_26035 IPR038181 Novel toxin 21 superfamily CFM90_26035 IPR025157 Hemagglutinin repeat CFM90_26040 IPR013686 Polypeptide-transport-associated, ShlB-type CFM90_26040 IPR027282 Two partner secretion pathway transporter CFM90_26040 IPR035251 ShlB, POTRA domain CFM90_26040 IPR034746 POTRA domain CFM90_26040 IPR005565 Haemolysin activator HlyB, C-terminal CFM90_26045 IPR027304 Trigger factor/SurA domain superfamily CFM90_26045 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CFM90_26045 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CFM90_26050 IPR008490 Transposase InsH, N-terminal CFM90_26050 IPR002559 Transposase, IS4-like CFM90_26065 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CFM90_26065 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing CFM90_26065 IPR042295 NarX-like, N-terminal domain superfamily CFM90_26065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFM90_26065 IPR029095 NarX-like, N-terminal CFM90_26065 IPR003660 HAMP domain CFM90_26065 IPR003594 Histidine kinase/HSP90-like ATPase CFM90_26065 IPR005467 Histidine kinase domain CFM90_26070 IPR001789 Signal transduction response regulator, receiver domain CFM90_26070 IPR011006 CheY-like superfamily CFM90_26070 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_26070 IPR000792 Transcription regulator LuxR, C-terminal CFM90_26075 IPR036388 Winged helix-like DNA-binding domain superfamily CFM90_26075 IPR000792 Transcription regulator LuxR, C-terminal CFM90_26075 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CFM90_26075 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CFM90_26075 IPR016032 Signal transduction response regulator, C-terminal effector CFM90_26085 IPR023346 Lysozyme-like domain superfamily CFM90_26085 IPR008258 Transglycosylase SLT domain 1 CFM90_26100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_26100 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CFM90_26100 IPR004346 CagE, TrbE, VirB component of type IV transporter system CFM90_26140 IPR042217 Type IV secretion system, VirB10/TrbI CFM90_26140 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CFM90_26145 IPR014155 Type IV secretion system protein VirB11 CFM90_26145 IPR001482 Type II/IV secretion system protein CFM90_26145 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFM90_26145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_26155 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_26155 IPR003688 Type IV secretion system protein TraG/VirD4 CFM90_26190 IPR002611 IstB-like ATP-binding protein CFM90_26190 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CFM90_26190 IPR003593 AAA+ ATPase domain CFM90_26190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_26195 IPR012337 Ribonuclease H-like superfamily CFM90_26195 IPR001584 Integrase, catalytic core CFM90_26195 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type CFM90_26195 IPR036397 Ribonuclease H superfamily CFM90_26315 IPR012337 Ribonuclease H-like superfamily CFM90_26315 IPR036397 Ribonuclease H superfamily CFM90_26315 IPR001584 Integrase, catalytic core CFM90_26315 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type CFM90_26320 IPR003593 AAA+ ATPase domain CFM90_26320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_26320 IPR002611 IstB-like ATP-binding protein CFM90_26320 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CFM90_26515 IPR023009 Tyrosine recombinase XerC/XerD CFM90_26515 IPR011010 DNA breaking-rejoining enzyme, catalytic core CFM90_26515 IPR013762 Integrase-like, catalytic domain superfamily CFM90_26515 IPR010998 Integrase/recombinase, N-terminal CFM90_26515 IPR002104 Integrase, catalytic domain CFM90_26515 IPR011931 Tyrosine recombinase XerC CFM90_26515 IPR004107 Integrase, SAM-like, N-terminal CFM90_26560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFM90_26560 IPR025669 AAA domain CFM90_26600 IPR005083 Serine/Threonine acetyltransferase, YopJ CFM90_26605 IPR002513 Tn3 transposase DDE domain CFM90_26605 IPR025296 Domain of unknown function DUF4158 CFM90_26610 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CFM90_26610 IPR009057 Homeobox-like domain superfamily CFM90_26610 IPR006120 Resolvase, HTH domain CFM90_26610 IPR006118 Recombinase, conserved site CFM90_26610 IPR006119 Resolvase, N-terminal catalytic domain