locus-tag class description IE4872_CH00001 PF03618 Kinase/pyrophosphorylase IE4872_CH00002 PF02545 Maf-like protein IE4872_CH00003 PF01488 Shikimate / quinate 5-dehydrogenase IE4872_CH00003 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IE4872_CH00003 PF08501 Shikimate dehydrogenase substrate binding domain IE4872_CH00004 PF01121 Dephospho-CoA kinase IE4872_CH00005 PF00929 Exonuclease IE4872_CH00006 PF02556 Preprotein translocase subunit SecB IE4872_CH00007 PF04186 FxsA cytoplasmic membrane protein IE4872_CH00009 PF03562 MltA specific insert domain IE4872_CH00009 PF06725 3D domain IE4872_CH00012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00012 PF01751 Toprim domain IE4872_CH00012 PF00986 DNA gyrase B subunit, carboxyl terminus IE4872_CH00012 PF00204 DNA gyrase B IE4872_CH00014 PF01557 Fumarylacetoacetate (FAA) hydrolase family IE4872_CH00018 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IE4872_CH00019 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_CH00020 PF00290 Tryptophan synthase alpha chain IE4872_CH00021 PF01039 Carboxyl transferase domain IE4872_CH00022 PF08245 Mur ligase middle domain IE4872_CH00023 PF07690 Major Facilitator Superfamily IE4872_CH00026 PF00085 Thioredoxin IE4872_CH00027 PF12705 PD-(D/E)XK nuclease superfamily IE4872_CH00027 PF00580 UvrD/REP helicase N-terminal domain IE4872_CH00027 PF13361 UvrD-like helicase C-terminal domain IE4872_CH00028 PF12705 PD-(D/E)XK nuclease superfamily IE4872_CH00029 PF12804 MobA-like NTP transferase domain IE4872_CH00030 PF01636 Phosphotransferase enzyme family IE4872_CH00031 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00031 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00032 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IE4872_CH00032 PF05221 S-adenosyl-L-homocysteine hydrolase IE4872_CH00033 PF00381 PTS HPr component phosphorylation site IE4872_CH00034 PF03610 PTS system fructose IIA component IE4872_CH00034 PF03830 PTS system sorbose subfamily IIB component IE4872_CH00035 PF07475 HPr Serine kinase C-terminal domain IE4872_CH00035 PF02603 HPr Serine kinase N terminus IE4872_CH00036 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00036 PF13756 Stimulus-sensing domain IE4872_CH00036 PF13755 Sensor N-terminal transmembrane domain IE4872_CH00036 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00036 PF00672 HAMP domain IE4872_CH00037 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH00037 PF00072 Response regulator receiver domain IE4872_CH00038 PF01293 Phosphoenolpyruvate carboxykinase IE4872_CH00039 PF00472 RF-1 domain IE4872_CH00040 PF13532 2OG-Fe(II) oxygenase superfamily IE4872_CH00041 PF00485 Phosphoribulokinase / Uridine kinase family IE4872_CH00042 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IE4872_CH00043 PF00977 Histidine biosynthesis protein IE4872_CH00044 PF00977 Histidine biosynthesis protein IE4872_CH00045 PF00117 Glutamine amidotransferase class-I IE4872_CH00047 PF00475 Imidazoleglycerol-phosphate dehydratase IE4872_CH00048 PF00227 Proteasome subunit IE4872_CH00049 PF01636 Phosphotransferase enzyme family IE4872_CH00050 PF10431 C-terminal, D2-small domain, of ClpB protein IE4872_CH00050 PF07724 AAA domain (Cdc48 subfamily) IE4872_CH00050 PF00004 ATPase family associated with various cellular activities (AAA) IE4872_CH00052 PF00067 Cytochrome P450 IE4872_CH00053 PF01274 Malate synthase IE4872_CH00056 PF00072 Response regulator receiver domain IE4872_CH00057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00057 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00058 PF08482 ATP-dependent helicase C-terminal IE4872_CH00058 PF04408 Helicase associated domain (HA2) IE4872_CH00058 PF00271 Helicase conserved C-terminal domain IE4872_CH00058 PF00270 DEAD/DEAH box helicase IE4872_CH00059 PF02423 Ornithine cyclodeaminase/mu-crystallin family IE4872_CH00067 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00068 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00069 PF03459 TOBE domain IE4872_CH00069 PF17912 MalK OB fold domain IE4872_CH00069 PF00005 ABC transporter IE4872_CH00070 PF03781 Sulfatase-modifying factor enzyme 1 IE4872_CH00073 PF01037 Lrp/AsnC ligand binding domain IE4872_CH00076 PF17841 BID domain of Bartonella effector protein (Bep) IE4872_CH00076 PF02661 Fic/DOC family IE4872_CH00077 PF01402 Ribbon-helix-helix protein, copG family IE4872_CH00078 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IE4872_CH00080 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH00080 PF17922 Tetracyclin repressor-like, C-terminal domain IE4872_CH00081 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IE4872_CH00083 PF00873 AcrB/AcrD/AcrF family IE4872_CH00085 PF00356 Bacterial regulatory proteins, lacI family IE4872_CH00087 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_CH00087 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IE4872_CH00088 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH00088 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH00091 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH00091 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH00092 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH00092 PF17938 Tetracyclin repressor-like, C-terminal domain IE4872_CH00094 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00095 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00096 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH00096 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH00097 PF03459 TOBE domain IE4872_CH00097 PF17912 MalK OB fold domain IE4872_CH00097 PF00005 ABC transporter IE4872_CH00099 PF16350 FAD dependent oxidoreductase central domain IE4872_CH00099 PF01266 FAD dependent oxidoreductase IE4872_CH00099 PF01571 Aminomethyltransferase folate-binding domain IE4872_CH00099 PF08669 Glycine cleavage T-protein C-terminal barrel domain IE4872_CH00100 PF08125 Mannitol dehydrogenase C-terminal domain IE4872_CH00100 PF01232 Mannitol dehydrogenase Rossmann domain IE4872_CH00101 PF02614 Glucuronate isomerase IE4872_CH00102 PF04102 SlyX IE4872_CH00103 PF00171 Aldehyde dehydrogenase family IE4872_CH00104 PF00202 Aminotransferase class-III IE4872_CH00108 PF00575 S1 RNA binding domain IE4872_CH00109 PF02224 Cytidylate kinase IE4872_CH00113 PF12728 Helix-turn-helix domain IE4872_CH00115 PF02463 RecF/RecN/SMC N terminal domain IE4872_CH00116 PF00899 ThiF family IE4872_CH00116 PF00581 Rhodanese-like domain IE4872_CH00118 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_CH00118 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IE4872_CH00120 PF00294 pfkB family carbohydrate kinase IE4872_CH00123 PF00034 Cytochrome c IE4872_CH00124 PF02348 Cytidylyltransferase IE4872_CH00125 PF00800 Prephenate dehydratase IE4872_CH00125 PF01817 Chorismate mutase type II IE4872_CH00128 PF13280 WYL domain IE4872_CH00128 PF08279 HTH domain IE4872_CH00129 PF00293 NUDIX domain IE4872_CH00129 PF09297 NADH pyrophosphatase zinc ribbon domain IE4872_CH00130 PF01230 HIT domain IE4872_CH00132 PF12170 DNA polymerase III tau subunit V interacting with alpha IE4872_CH00132 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IE4872_CH00132 PF12169 DNA polymerase III subunits gamma and tau domain III IE4872_CH00133 PF02575 YbaB/EbfC DNA-binding family IE4872_CH00134 PF01810 LysE type translocator IE4872_CH00136 PF02132 RecR protein IE4872_CH00136 PF13662 Toprim domain IE4872_CH00139 PF05977 Transmembrane secretion effector IE4872_CH00140 PF02576 RimP N-terminal domain IE4872_CH00140 PF17384 RimP C-terminal SH3 domain IE4872_CH00141 PF00575 S1 RNA binding domain IE4872_CH00141 PF08529 NusA N-terminal domain IE4872_CH00141 PF13184 NusA-like KH domain IE4872_CH00143 PF04760 Translation initiation factor IF-2, N-terminal region IE4872_CH00143 PF08364 Bacterial translation initiation factor IF-2 associated region IE4872_CH00143 PF11987 Translation-initiation factor 2 IE4872_CH00143 PF00009 Elongation factor Tu GTP binding domain IE4872_CH00144 PF02033 Ribosome-binding factor A IE4872_CH00145 PF09157 Pseudouridine synthase II TruB, C-terminal IE4872_CH00145 PF16198 tRNA pseudouridylate synthase B C-terminal domain IE4872_CH00145 PF01509 TruB family pseudouridylate synthase (N terminal domain) IE4872_CH00146 PF00561 alpha/beta hydrolase fold IE4872_CH00147 PF00312 Ribosomal protein S15 IE4872_CH00148 PF03725 3' exoribonuclease family, domain 2 IE4872_CH00148 PF00013 KH domain IE4872_CH00148 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IE4872_CH00148 PF01138 3' exoribonuclease family, domain 1 IE4872_CH00148 PF00575 S1 RNA binding domain IE4872_CH00149 PF08468 Methyltransferase small domain N-terminal IE4872_CH00149 PF05175 Methyltransferase small domain IE4872_CH00151 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_CH00151 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_CH00152 PF07977 FabA-like domain IE4872_CH00154 PF03458 UPF0126 domain IE4872_CH00162 PF01381 Helix-turn-helix IE4872_CH00165 PF07690 Major Facilitator Superfamily IE4872_CH00166 PF00684 DnaJ central domain IE4872_CH00166 PF00226 DnaJ domain IE4872_CH00166 PF01556 DnaJ C terminal domain IE4872_CH00167 PF00012 Hsp70 protein IE4872_CH00168 PF00912 Transglycosylase IE4872_CH00168 PF00905 Penicillin binding protein transpeptidase domain IE4872_CH00171 PF01546 Peptidase family M20/M25/M40 IE4872_CH00171 PF07687 Peptidase dimerisation domain IE4872_CH00174 PF01367 5'-3' exonuclease, C-terminal SAM fold IE4872_CH00174 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IE4872_CH00174 PF01612 3'-5' exonuclease IE4872_CH00174 PF00476 DNA polymerase family A IE4872_CH00175 PF17854 FtsK alpha domain IE4872_CH00175 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IE4872_CH00175 PF01580 FtsK/SpoIIIE family IE4872_CH00175 PF09397 Ftsk gamma domain IE4872_CH00176 PF00625 Guanylate kinase IE4872_CH00177 PF07969 Amidohydrolase family IE4872_CH00178 PF06299 Protein of unknown function (DUF1045) IE4872_CH00180 PF00005 ABC transporter IE4872_CH00181 PF00005 ABC transporter IE4872_CH00182 PF06007 Phosphonate metabolism protein PhnJ IE4872_CH00183 PF05861 Bacterial phosphonate metabolism protein (PhnI) IE4872_CH00184 PF05845 Bacterial phosphonate metabolism protein (PhnH) IE4872_CH00185 PF06754 Phosphonate metabolism protein PhnG IE4872_CH00186 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH00186 PF07702 UTRA domain IE4872_CH00187 PF00300 Histidine phosphatase superfamily (branch 1) IE4872_CH00188 PF05173 Dihydrodipicolinate reductase, C-terminus IE4872_CH00188 PF01113 Dihydrodipicolinate reductase, N-terminus IE4872_CH00189 PF00005 ABC transporter IE4872_CH00189 PF00664 ABC transporter transmembrane region IE4872_CH00190 PF02685 Glucokinase IE4872_CH00191 PF02142 MGS-like domain IE4872_CH00192 PF03411 Penicillin-insensitive murein endopeptidase IE4872_CH00193 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_CH00194 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00195 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_CH00195 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00196 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH00196 PF00005 ABC transporter IE4872_CH00197 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_CH00199 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IE4872_CH00199 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IE4872_CH00201 PF10931 Protein of unknown function (DUF2735) IE4872_CH00202 PF03951 Glutamine synthetase, beta-Grasp domain IE4872_CH00202 PF00120 Glutamine synthetase, catalytic domain IE4872_CH00206 PF01625 Peptide methionine sulfoxide reductase IE4872_CH00211 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IE4872_CH00212 PF01048 Phosphorylase superfamily IE4872_CH00213 PF01791 DeoC/LacD family aldolase IE4872_CH00214 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IE4872_CH00214 PF00591 Glycosyl transferase family, a/b domain IE4872_CH00214 PF02885 Glycosyl transferase family, helical bundle domain IE4872_CH00217 PF00962 Adenosine/AMP deaminase IE4872_CH00218 PF01676 Metalloenzyme superfamily IE4872_CH00225 PF13629 Pilus formation protein N terminal region IE4872_CH00225 PF00263 Bacterial type II and III secretion system protein IE4872_CH00225 PF04972 BON domain IE4872_CH00228 PF00437 Type II/IV secretion system protein IE4872_CH00231 PF01810 LysE type translocator IE4872_CH00233 PF00883 Cytosol aminopeptidase family, catalytic domain IE4872_CH00233 PF02789 Cytosol aminopeptidase family, N-terminal domain IE4872_CH00235 PF00877 NlpC/P60 family IE4872_CH00237 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00238 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_CH00239 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00239 PF03466 LysR substrate binding domain IE4872_CH00243 PF00551 Formyl transferase IE4872_CH00245 PF00150 Cellulase (glycosyl hydrolase family 5) IE4872_CH00255 PF06421 GTP-binding protein LepA C-terminus IE4872_CH00255 PF00009 Elongation factor Tu GTP binding domain IE4872_CH00255 PF00679 Elongation factor G C-terminus IE4872_CH00255 PF03144 Elongation factor Tu domain 2 IE4872_CH00256 PF07883 Cupin domain IE4872_CH00256 PF01381 Helix-turn-helix IE4872_CH00258 PF00850 Histone deacetylase domain IE4872_CH00259 PF02631 RecX family IE4872_CH00260 PF00892 EamA-like transporter family IE4872_CH00264 PF12146 Serine aminopeptidase, S33 IE4872_CH00265 PF05198 Translation initiation factor IF-3, N-terminal domain IE4872_CH00265 PF00707 Translation initiation factor IF-3, C-terminal domain IE4872_CH00267 PF01632 Ribosomal protein L35 IE4872_CH00268 PF00453 Ribosomal protein L20 IE4872_CH00269 PF01409 tRNA synthetases class II core domain (F) IE4872_CH00269 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IE4872_CH00270 PF03483 B3/4 domain IE4872_CH00270 PF03484 tRNA synthetase B5 domain IE4872_CH00270 PF03147 Ferredoxin-fold anticodon binding domain IE4872_CH00270 PF01588 Putative tRNA binding domain IE4872_CH00270 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IE4872_CH00272 PF05974 Domain of unknown function (DUF892) IE4872_CH00275 PF00248 Aldo/keto reductase family IE4872_CH00276 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH00276 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH00282 PF13742 OB-fold nucleic acid binding domain IE4872_CH00282 PF02601 Exonuclease VII, large subunit IE4872_CH00283 PF02525 Flavodoxin-like fold IE4872_CH00284 PF01047 MarR family IE4872_CH00285 PF02073 Thermophilic metalloprotease (M29) IE4872_CH00286 PF00043 Glutathione S-transferase, C-terminal domain IE4872_CH00286 PF02798 Glutathione S-transferase, N-terminal domain IE4872_CH00289 PF04073 Aminoacyl-tRNA editing domain IE4872_CH00290 PF03960 ArsC family IE4872_CH00292 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IE4872_CH00292 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IE4872_CH00302 PF03466 LysR substrate binding domain IE4872_CH00302 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00310 PF03466 LysR substrate binding domain IE4872_CH00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00312 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH00312 PF00107 Zinc-binding dehydrogenase IE4872_CH00315 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH00315 PF00107 Zinc-binding dehydrogenase IE4872_CH00316 PF03466 LysR substrate binding domain IE4872_CH00316 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00318 PF02678 Pirin IE4872_CH00318 PF05726 Pirin C-terminal cupin domain IE4872_CH00319 PF00107 Zinc-binding dehydrogenase IE4872_CH00319 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH00320 PF03466 LysR substrate binding domain IE4872_CH00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00322 PF00248 Aldo/keto reductase family IE4872_CH00323 PF00561 alpha/beta hydrolase fold IE4872_CH00324 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH00324 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH00325 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH00325 PF00072 Response regulator receiver domain IE4872_CH00326 PF08521 Two-component sensor kinase N-terminal IE4872_CH00326 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00326 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00331 PF03466 LysR substrate binding domain IE4872_CH00331 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00332 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IE4872_CH00332 PF00326 Prolyl oligopeptidase family IE4872_CH00336 PF00117 Glutamine amidotransferase class-I IE4872_CH00336 PF00958 GMP synthase C terminal domain IE4872_CH00343 PF01189 16S rRNA methyltransferase RsmB/F IE4872_CH00343 PF01029 NusB family IE4872_CH00344 PF03330 Lytic transglycolase IE4872_CH00346 PF08331 Domain of unknown function (DUF1730) IE4872_CH00347 PF00043 Glutathione S-transferase, C-terminal domain IE4872_CH00347 PF13417 Glutathione S-transferase, N-terminal domain IE4872_CH00348 PF02673 Bacitracin resistance protein BacA IE4872_CH00352 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IE4872_CH00354 PF13649 Methyltransferase domain IE4872_CH00355 PF00712 DNA polymerase III beta subunit, N-terminal domain IE4872_CH00355 PF02767 DNA polymerase III beta subunit, central domain IE4872_CH00355 PF02768 DNA polymerase III beta subunit, C-terminal domain IE4872_CH00356 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IE4872_CH00357 PF00005 ABC transporter IE4872_CH00359 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IE4872_CH00359 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IE4872_CH00361 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_CH00362 PF01810 LysE type translocator IE4872_CH00363 PF00857 Isochorismatase family IE4872_CH00365 PF01037 Lrp/AsnC ligand binding domain IE4872_CH00367 PF00692 dUTPase IE4872_CH00368 PF00009 Elongation factor Tu GTP binding domain IE4872_CH00368 PF03144 Elongation factor Tu domain 2 IE4872_CH00368 PF16658 Class II release factor RF3, C-terminal domain IE4872_CH00371 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_CH00371 PF13291 ACT domain IE4872_CH00373 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00373 PF03466 LysR substrate binding domain IE4872_CH00374 PF02798 Glutathione S-transferase, N-terminal domain IE4872_CH00374 PF00043 Glutathione S-transferase, C-terminal domain IE4872_CH00375 PF00884 Sulfatase IE4872_CH00375 PF12411 Choline sulfatase enzyme C terminal IE4872_CH00376 PF03466 LysR substrate binding domain IE4872_CH00376 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00377 PF00982 Glycosyltransferase family 20 IE4872_CH00378 PF02358 Trehalose-phosphatase IE4872_CH00381 PF07690 Major Facilitator Superfamily IE4872_CH00382 PF07729 FCD domain IE4872_CH00382 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH00384 PF04127 DNA / pantothenate metabolism flavoprotein IE4872_CH00384 PF02441 Flavoprotein IE4872_CH00386 PF03466 LysR substrate binding domain IE4872_CH00386 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00387 PF07690 Major Facilitator Superfamily IE4872_CH00388 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_CH00389 PF01175 Urocanase Rossmann-like domain IE4872_CH00389 PF17392 Urocanase C-terminal domain IE4872_CH00389 PF17391 Urocanase N-terminal domain IE4872_CH00392 PF07687 Peptidase dimerisation domain IE4872_CH00392 PF01546 Peptidase family M20/M25/M40 IE4872_CH00393 PF01979 Amidohydrolase family IE4872_CH00394 PF00221 Aromatic amino acid lyase IE4872_CH00395 PF03109 ABC1 family IE4872_CH00396 PF01209 ubiE/COQ5 methyltransferase family IE4872_CH00397 PF06827 Zinc finger found in FPG and IleRS IE4872_CH00397 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IE4872_CH00397 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IE4872_CH00398 PF00378 Enoyl-CoA hydratase/isomerase IE4872_CH00399 PF01649 Ribosomal protein S20 IE4872_CH00400 PF11638 DnaA N-terminal domain IE4872_CH00400 PF00308 Bacterial dnaA protein IE4872_CH00400 PF08299 Bacterial dnaA protein helix-turn-helix IE4872_CH00404 PF00593 TonB dependent receptor IE4872_CH00404 PF07715 TonB-dependent Receptor Plug Domain IE4872_CH00405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00405 PF03466 LysR substrate binding domain IE4872_CH00407 PF04055 Radical SAM superfamily IE4872_CH00407 PF06969 HemN C-terminal domain IE4872_CH00408 PF01725 Ham1 family IE4872_CH00410 PF03725 3' exoribonuclease family, domain 2 IE4872_CH00410 PF01138 3' exoribonuclease family, domain 1 IE4872_CH00411 PF01628 HrcA protein C terminal domain IE4872_CH00412 PF01025 GrpE IE4872_CH00413 PF01156 Inosine-uridine preferring nucleoside hydrolase IE4872_CH00414 PF00011 Hsp20/alpha crystallin family IE4872_CH00416 PF02390 Putative methyltransferase IE4872_CH00417 PF02773 S-adenosylmethionine synthetase, C-terminal domain IE4872_CH00417 PF02772 S-adenosylmethionine synthetase, central domain IE4872_CH00417 PF00438 S-adenosylmethionine synthetase, N-terminal domain IE4872_CH00418 PF01381 Helix-turn-helix IE4872_CH00419 PF00795 Carbon-nitrogen hydrolase IE4872_CH00420 PF00571 CBS domain IE4872_CH00420 PF03471 Transporter associated domain IE4872_CH00421 PF02130 Uncharacterized protein family UPF0054 IE4872_CH00422 PF02562 PhoH-like protein IE4872_CH00423 PF01938 TRAM domain IE4872_CH00423 PF04055 Radical SAM superfamily IE4872_CH00423 PF00919 Uncharacterized protein family UPF0004 IE4872_CH00424 PF01553 Acyltransferase IE4872_CH00425 PF01475 Ferric uptake regulator family IE4872_CH00427 PF00814 Glycoprotease family IE4872_CH00428 PF01106 NifU-like domain IE4872_CH00430 PF00579 tRNA synthetases class I (W and Y) IE4872_CH00433 PF03023 Lipid II flippase MurJ IE4872_CH00434 PF01842 ACT domain IE4872_CH00434 PF01909 Nucleotidyltransferase domain IE4872_CH00434 PF01966 HD domain IE4872_CH00434 PF08335 GlnD PII-uridylyltransferase IE4872_CH00436 PF00488 MutS domain V IE4872_CH00436 PF01624 MutS domain I IE4872_CH00436 PF05188 MutS domain II IE4872_CH00436 PF05192 MutS domain III IE4872_CH00436 PF05190 MutS family domain IV IE4872_CH00437 PF01515 Phosphate acetyl/butaryl transferase IE4872_CH00437 PF03949 Malic enzyme, NAD binding domain IE4872_CH00437 PF00390 Malic enzyme, N-terminal domain IE4872_CH00439 PF01627 Hpt domain IE4872_CH00439 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IE4872_CH00439 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00439 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00439 PF00672 HAMP domain IE4872_CH00439 PF00072 Response regulator receiver domain IE4872_CH00440 PF01252 Signal peptidase (SPase) II IE4872_CH00441 PF08032 RNA 2'-O ribose methyltransferase substrate binding IE4872_CH00441 PF00588 SpoU rRNA Methylase family IE4872_CH00442 PF02926 THUMP domain IE4872_CH00442 PF01170 Putative RNA methylase family UPF0020 IE4872_CH00442 PF10672 S-adenosylmethionine-dependent methyltransferase IE4872_CH00444 PF00583 Acetyltransferase (GNAT) family IE4872_CH00446 PF00216 Bacterial DNA-binding protein IE4872_CH00447 PF06965 Na+/H+ antiporter 1 IE4872_CH00447 PF01343 Peptidase family S49 IE4872_CH00449 PF03968 OstA-like protein IE4872_CH00450 PF00005 ABC transporter IE4872_CH00451 PF00309 Sigma-54 factor, Activator interacting domain (AID) IE4872_CH00451 PF04963 Sigma-54 factor, core binding domain IE4872_CH00451 PF04552 Sigma-54, DNA binding domain IE4872_CH00452 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IE4872_CH00452 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus IE4872_CH00453 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IE4872_CH00454 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH00454 PF00672 HAMP domain IE4872_CH00455 PF00294 pfkB family carbohydrate kinase IE4872_CH00457 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH00458 PF01327 Polypeptide deformylase IE4872_CH00460 PF02911 Formyl transferase, C-terminal domain IE4872_CH00460 PF00551 Formyl transferase IE4872_CH00461 PF01416 tRNA pseudouridine synthase IE4872_CH00463 PF07687 Peptidase dimerisation domain IE4872_CH00463 PF01546 Peptidase family M20/M25/M40 IE4872_CH00464 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IE4872_CH00464 PF14602 Hexapeptide repeat of succinyl-transferase IE4872_CH00464 PF00132 Bacterial transferase hexapeptide (six repeats) IE4872_CH00468 PF02805 Metal binding domain of Ada IE4872_CH00468 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IE4872_CH00468 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IE4872_CH00468 PF12833 Helix-turn-helix domain IE4872_CH00470 PF00696 Amino acid kinase family IE4872_CH00471 PF10668 Phage terminase small subunit IE4872_CH00473 PF02469 Fasciclin domain IE4872_CH00474 PF01926 50S ribosome-binding GTPase IE4872_CH00475 PF14849 YidC periplasmic domain IE4872_CH00475 PF02096 60Kd inner membrane protein IE4872_CH00476 PF00825 Ribonuclease P IE4872_CH00477 PF00468 Ribosomal protein L34 IE4872_CH00478 PF02203 Tar ligand binding domain homologue IE4872_CH00478 PF00672 HAMP domain IE4872_CH00478 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH00479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00479 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00479 PF00989 PAS fold IE4872_CH00485 PF09019 EcoRII C terminal IE4872_CH00486 PF03852 DNA mismatch endonuclease Vsr IE4872_CH00487 PF18284 DNA methylase N-terminal domain IE4872_CH00487 PF00145 C-5 cytosine-specific DNA methylase IE4872_CH00496 PF12728 Helix-turn-helix domain IE4872_CH00496 PF02661 Fic/DOC family IE4872_CH00499 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH00500 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH00504 PF07886 BA14K-like protein IE4872_CH00507 PF00679 Elongation factor G C-terminus IE4872_CH00507 PF03764 Elongation factor G, domain IV IE4872_CH00507 PF00009 Elongation factor Tu GTP binding domain IE4872_CH00509 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH00509 PF02909 Tetracyclin repressor-like, C-terminal domain IE4872_CH00513 PF13657 HipA N-terminal domain IE4872_CH00513 PF07804 HipA-like C-terminal domain IE4872_CH00518 PF00398 Ribosomal RNA adenine dimethylase IE4872_CH00519 PF16295 Tetracyclin repressor-like, C-terminal domain IE4872_CH00519 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH00521 PF01266 FAD dependent oxidoreductase IE4872_CH00523 PF05544 Proline racemase IE4872_CH00524 PF05025 RbsD / FucU transport protein family IE4872_CH00525 PF00480 ROK family IE4872_CH00526 PF13407 Periplasmic binding protein domain IE4872_CH00527 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH00528 PF00005 ABC transporter IE4872_CH00529 PF00485 Phosphoribulokinase / Uridine kinase family IE4872_CH00530 PF01979 Amidohydrolase family IE4872_CH00533 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH00534 PF13194 Domain of unknown function (DUF4010) IE4872_CH00535 PF00156 Phosphoribosyl transferase domain IE4872_CH00536 PF00294 pfkB family carbohydrate kinase IE4872_CH00537 PF00561 alpha/beta hydrolase fold IE4872_CH00539 PF07995 Glucose / Sorbosone dehydrogenase IE4872_CH00541 PF00342 Phosphoglucose isomerase IE4872_CH00542 PF13193 AMP-binding enzyme C-terminal domain IE4872_CH00542 PF00501 AMP-binding enzyme IE4872_CH00545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_CH00546 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00547 PF00005 ABC transporter IE4872_CH00548 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00549 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IE4872_CH00551 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00551 PF03466 LysR substrate binding domain IE4872_CH00552 PF03932 CutC family IE4872_CH00553 PF00107 Zinc-binding dehydrogenase IE4872_CH00553 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH00554 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH00555 PF00005 ABC transporter IE4872_CH00557 PF05025 RbsD / FucU transport protein family IE4872_CH00558 PF00248 Aldo/keto reductase family IE4872_CH00559 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IE4872_CH00559 PF08666 SAF domain IE4872_CH00562 PF17969 L,D-transpeptidase C-terminal domain IE4872_CH00562 PF03734 L,D-transpeptidase catalytic domain IE4872_CH00566 PF00106 short chain dehydrogenase IE4872_CH00567 PF08241 Methyltransferase domain IE4872_CH00568 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH00574 PF03976 Polyphosphate kinase 2 (PPK2) IE4872_CH00575 PF16736 Single Cache-like IE4872_CH00575 PF00989 PAS fold IE4872_CH00575 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00577 PF00202 Aminotransferase class-III IE4872_CH00578 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IE4872_CH00578 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IE4872_CH00579 PF01430 Hsp33 protein IE4872_CH00580 PF04379 ApaG domain IE4872_CH00581 PF01053 Cys/Met metabolism PLP-dependent enzyme IE4872_CH00582 PF00692 dUTPase IE4872_CH00584 PF00672 HAMP domain IE4872_CH00584 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH00587 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_CH00590 PF00717 Peptidase S24-like IE4872_CH00590 PF01726 LexA DNA binding domain IE4872_CH00591 PF00072 Response regulator receiver domain IE4872_CH00591 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00594 PF01180 Dihydroorotate dehydrogenase IE4872_CH00596 PF16859 Tetracyclin repressor-like, C-terminal domain IE4872_CH00596 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH00601 PF08448 PAS fold IE4872_CH00601 PF00072 Response regulator receiver domain IE4872_CH00601 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00601 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00601 PF13426 PAS domain IE4872_CH00602 PF00072 Response regulator receiver domain IE4872_CH00603 PF00072 Response regulator receiver domain IE4872_CH00603 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00604 PF00072 Response regulator receiver domain IE4872_CH00604 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00616 PF02627 Carboxymuconolactone decarboxylase family IE4872_CH00617 PF02082 Transcriptional regulator IE4872_CH00619 PF00271 Helicase conserved C-terminal domain IE4872_CH00619 PF00270 DEAD/DEAH box helicase IE4872_CH00619 PF08494 DEAD/H associated IE4872_CH00623 PF01872 RibD C-terminal domain IE4872_CH00624 PF01638 HxlR-like helix-turn-helix IE4872_CH00626 PF01925 Sulfite exporter TauE/SafE IE4872_CH00627 PF07478 D-ala D-ala ligase C-terminus IE4872_CH00627 PF01820 D-ala D-ala ligase N-terminus IE4872_CH00630 PF01037 Lrp/AsnC ligand binding domain IE4872_CH00631 PF01053 Cys/Met metabolism PLP-dependent enzyme IE4872_CH00633 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH00633 PF00155 Aminotransferase class I and II IE4872_CH00634 PF00892 EamA-like transporter family IE4872_CH00636 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_CH00636 PF12806 Acetyl-CoA dehydrogenase C-terminal like IE4872_CH00636 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_CH00636 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_CH00637 PF00108 Thiolase, N-terminal domain IE4872_CH00637 PF02803 Thiolase, C-terminal domain IE4872_CH00638 PF00378 Enoyl-CoA hydratase/isomerase IE4872_CH00638 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IE4872_CH00638 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IE4872_CH00640 PF00313 'Cold-shock' DNA-binding domain IE4872_CH00641 PF01627 Hpt domain IE4872_CH00641 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00641 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00641 PF00672 HAMP domain IE4872_CH00641 PF00072 Response regulator receiver domain IE4872_CH00642 PF01741 Large-conductance mechanosensitive channel, MscL IE4872_CH00643 PF00155 Aminotransferase class I and II IE4872_CH00644 PF01370 NAD dependent epimerase/dehydratase family IE4872_CH00645 PF00378 Enoyl-CoA hydratase/isomerase IE4872_CH00646 PF13361 UvrD-like helicase C-terminal domain IE4872_CH00646 PF00580 UvrD/REP helicase N-terminal domain IE4872_CH00654 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IE4872_CH00657 PF06793 Uncharacterised protein family (UPF0262) IE4872_CH00658 PF01451 Low molecular weight phosphotyrosine protein phosphatase IE4872_CH00659 PF01176 Translation initiation factor 1A / IF-1 IE4872_CH00660 PF02545 Maf-like protein IE4872_CH00661 PF03884 DNA gyrase inhibitor YacG IE4872_CH00663 PF01266 FAD dependent oxidoreductase IE4872_CH00664 PF00842 Alanine racemase, C-terminal domain IE4872_CH00664 PF01168 Alanine racemase, N-terminal domain IE4872_CH00665 PF01037 Lrp/AsnC ligand binding domain IE4872_CH00668 PF01266 FAD dependent oxidoreductase IE4872_CH00671 PF00202 Aminotransferase class-III IE4872_CH00673 PF00180 Isocitrate/isopropylmalate dehydrogenase IE4872_CH00675 PF00202 Aminotransferase class-III IE4872_CH00678 PF03466 LysR substrate binding domain IE4872_CH00678 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00679 PF07005 Sugar-binding N-terminal domain IE4872_CH00679 PF17042 Nucleotide-binding C-terminal domain IE4872_CH00680 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IE4872_CH00683 PF00180 Isocitrate/isopropylmalate dehydrogenase IE4872_CH00685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_CH00686 PF01546 Peptidase family M20/M25/M40 IE4872_CH00686 PF07687 Peptidase dimerisation domain IE4872_CH00688 PF00171 Aldehyde dehydrogenase family IE4872_CH00690 PF02423 Ornithine cyclodeaminase/mu-crystallin family IE4872_CH00691 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH00691 PF00005 ABC transporter IE4872_CH00692 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_CH00693 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00694 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00694 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_CH00695 PF01266 FAD dependent oxidoreductase IE4872_CH00696 PF00171 Aldehyde dehydrogenase family IE4872_CH00698 PF13673 Acetyltransferase (GNAT) domain IE4872_CH00698 PF18014 Acetyltransferase (GNAT) domain IE4872_CH00699 PF00202 Aminotransferase class-III IE4872_CH00700 PF01037 Lrp/AsnC ligand binding domain IE4872_CH00702 PF14031 Putative serine dehydratase domain IE4872_CH00702 PF01168 Alanine racemase, N-terminal domain IE4872_CH00703 PF01266 FAD dependent oxidoreductase IE4872_CH00704 PF00171 Aldehyde dehydrogenase family IE4872_CH00705 PF00501 AMP-binding enzyme IE4872_CH00705 PF16177 Acetyl-coenzyme A synthetase N-terminus IE4872_CH00705 PF13193 AMP-binding enzyme C-terminal domain IE4872_CH00707 PF01266 FAD dependent oxidoreductase IE4872_CH00708 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IE4872_CH00708 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH00713 PF00535 Glycosyl transferase family 2 IE4872_CH00714 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_CH00715 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00715 PF00360 Phytochrome region IE4872_CH00715 PF08446 PAS fold IE4872_CH00715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00715 PF01590 GAF domain IE4872_CH00716 PF00072 Response regulator receiver domain IE4872_CH00717 PF01590 GAF domain IE4872_CH00717 PF08446 PAS fold IE4872_CH00717 PF00360 Phytochrome region IE4872_CH00717 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00717 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00719 PF03472 Autoinducer binding domain IE4872_CH00719 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00721 PF00360 Phytochrome region IE4872_CH00721 PF08446 PAS fold IE4872_CH00721 PF01590 GAF domain IE4872_CH00721 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00722 PF02355 Protein export membrane protein IE4872_CH00722 PF07549 SecD/SecF GG Motif IE4872_CH00724 PF02254 TrkA-N domain IE4872_CH00724 PF00999 Sodium/hydrogen exchanger family IE4872_CH00726 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase IE4872_CH00727 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH00730 PF01627 Hpt domain IE4872_CH00730 PF02895 Signal transducing histidine kinase, homodimeric domain IE4872_CH00730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00730 PF01584 CheW-like domain IE4872_CH00731 PF01584 CheW-like domain IE4872_CH00732 PF01739 CheR methyltransferase, SAM binding domain IE4872_CH00732 PF03705 CheR methyltransferase, all-alpha domain IE4872_CH00733 PF00072 Response regulator receiver domain IE4872_CH00733 PF01339 CheB methylesterase IE4872_CH00734 PF00072 Response regulator receiver domain IE4872_CH00735 PF03975 CheD chemotactic sensory transduction IE4872_CH00737 PF01514 Secretory protein of YscJ/FliF family IE4872_CH00737 PF08345 Flagellar M-ring protein C-terminal IE4872_CH00738 PF03472 Autoinducer binding domain IE4872_CH00738 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00741 PF01312 FlhB HrpN YscU SpaS Family IE4872_CH00742 PF14842 FliG N-terminal domain IE4872_CH00742 PF01706 FliG C-terminal domain IE4872_CH00742 PF14841 FliG middle domain IE4872_CH00743 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IE4872_CH00744 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IE4872_CH00745 PF01618 MotA/TolQ/ExbB proton channel family IE4872_CH00746 PF00460 Flagella basal body rod protein IE4872_CH00746 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IE4872_CH00747 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IE4872_CH00747 PF18269 T3SS EscN ATPase C-terminal domain IE4872_CH00749 PF00460 Flagella basal body rod protein IE4872_CH00750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IE4872_CH00751 PF02049 Flagellar hook-basal body complex protein FliE IE4872_CH00752 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IE4872_CH00752 PF00460 Flagella basal body rod protein IE4872_CH00753 PF13144 Chaperone for flagella basal body P-ring formation IE4872_CH00754 PF02119 Flagellar P-ring protein IE4872_CH00756 PF02107 Flagellar L-ring protein IE4872_CH00758 PF00813 FliP family IE4872_CH00760 PF00700 Bacterial flagellin C-terminal helical region IE4872_CH00760 PF00669 Bacterial flagellin N-terminal helical region IE4872_CH00761 PF00700 Bacterial flagellin C-terminal helical region IE4872_CH00761 PF00669 Bacterial flagellin N-terminal helical region IE4872_CH00762 PF00669 Bacterial flagellin N-terminal helical region IE4872_CH00762 PF00700 Bacterial flagellin C-terminal helical region IE4872_CH00763 PF00669 Bacterial flagellin N-terminal helical region IE4872_CH00763 PF00700 Bacterial flagellin C-terminal helical region IE4872_CH00765 PF13677 Membrane MotB of proton-channel complex MotA/MotB IE4872_CH00765 PF00691 OmpA family IE4872_CH00767 PF02120 Flagellar hook-length control protein FliK IE4872_CH00769 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH00770 PF00460 Flagella basal body rod protein IE4872_CH00770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IE4872_CH00770 PF07559 Flagellar basal body protein FlaE IE4872_CH00774 PF07378 Flagellar protein FlbT IE4872_CH00776 PF01313 Bacterial export proteins, family 3 IE4872_CH00777 PF00771 FHIPEP family IE4872_CH00778 PF01311 Bacterial export proteins, family 1 IE4872_CH00785 PF03808 Glycosyl transferase WecB/TagA/CpsF family IE4872_CH00787 PF12323 Helix-turn-helix domain IE4872_CH00787 PF01385 Probable transposase IE4872_CH00787 PF07282 Putative transposase DNA-binding domain IE4872_CH00788 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IE4872_CH00788 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IE4872_CH00789 PF00356 Bacterial regulatory proteins, lacI family IE4872_CH00790 PF01547 Bacterial extracellular solute-binding protein IE4872_CH00791 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00792 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00793 PF00128 Alpha amylase, catalytic domain IE4872_CH00794 PF17912 MalK OB fold domain IE4872_CH00794 PF03459 TOBE domain IE4872_CH00794 PF00005 ABC transporter IE4872_CH00796 PF00920 Dehydratase family IE4872_CH00797 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IE4872_CH00798 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IE4872_CH00798 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IE4872_CH00799 PF01266 FAD dependent oxidoreductase IE4872_CH00800 PF03951 Glutamine synthetase, beta-Grasp domain IE4872_CH00800 PF00120 Glutamine synthetase, catalytic domain IE4872_CH00803 PF00672 HAMP domain IE4872_CH00803 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH00804 PF00672 HAMP domain IE4872_CH00804 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH00807 PF00072 Response regulator receiver domain IE4872_CH00807 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00809 PF01548 Transposase IE4872_CH00809 PF02371 Transposase IS116/IS110/IS902 family IE4872_CH00810 PF00463 Isocitrate lyase family IE4872_CH00811 PF09856 Predicted transcriptional regulator (DUF2083) IE4872_CH00811 PF01381 Helix-turn-helix IE4872_CH00811 PF06114 IrrE N-terminal-like domain IE4872_CH00812 PF13416 Bacterial extracellular solute-binding protein IE4872_CH00813 PF00005 ABC transporter IE4872_CH00813 PF08402 TOBE domain IE4872_CH00814 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00815 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00817 PF00501 AMP-binding enzyme IE4872_CH00817 PF13193 AMP-binding enzyme C-terminal domain IE4872_CH00818 PF13426 PAS domain IE4872_CH00818 PF13188 PAS domain IE4872_CH00818 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00818 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00818 PF00989 PAS fold IE4872_CH00826 PF00171 Aldehyde dehydrogenase family IE4872_CH00828 PF02082 Transcriptional regulator IE4872_CH00829 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_CH00830 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00831 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH00831 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_CH00832 PF00005 ABC transporter IE4872_CH00832 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH00833 PF00005 ABC transporter IE4872_CH00833 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH00834 PF01202 Shikimate kinase IE4872_CH00836 PF01266 FAD dependent oxidoreductase IE4872_CH00837 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family IE4872_CH00838 PF00195 Chalcone and stilbene synthases, N-terminal domain IE4872_CH00838 PF02797 Chalcone and stilbene synthases, C-terminal domain IE4872_CH00840 PF08281 Sigma-70, region 4 IE4872_CH00840 PF04542 Sigma-70 region 2 IE4872_CH00844 PF00005 ABC transporter IE4872_CH00844 PF12848 ABC transporter IE4872_CH00845 PF01546 Peptidase family M20/M25/M40 IE4872_CH00845 PF07687 Peptidase dimerisation domain IE4872_CH00847 PF00672 HAMP domain IE4872_CH00847 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH00853 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH00854 PF00072 Response regulator receiver domain IE4872_CH00855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH00855 PF17149 Periplasmic sensor domain found in signal transduction proteins IE4872_CH00855 PF01627 Hpt domain IE4872_CH00855 PF00672 HAMP domain IE4872_CH00855 PF00072 Response regulator receiver domain IE4872_CH00855 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH00856 PF13458 Periplasmic binding protein IE4872_CH00859 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH00859 PF07729 FCD domain IE4872_CH00863 PF13192 Thioredoxin domain IE4872_CH00863 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH00864 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00865 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00869 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00870 PF07690 Major Facilitator Superfamily IE4872_CH00871 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00873 PF06441 Epoxide hydrolase N terminus IE4872_CH00874 PF02566 OsmC-like protein IE4872_CH00875 PF00561 alpha/beta hydrolase fold IE4872_CH00879 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH00879 PF00107 Zinc-binding dehydrogenase IE4872_CH00881 PF02541 Ppx/GppA phosphatase family IE4872_CH00882 PF01728 FtsJ-like methyltransferase IE4872_CH00884 PF07690 Major Facilitator Superfamily IE4872_CH00886 PF00571 CBS domain IE4872_CH00886 PF00478 IMP dehydrogenase / GMP reductase domain IE4872_CH00889 PF01738 Dienelactone hydrolase family IE4872_CH00891 PF03466 LysR substrate binding domain IE4872_CH00891 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00894 PF04107 Glutamate-cysteine ligase family 2(GCS2) IE4872_CH00895 PF04452 RNA methyltransferase IE4872_CH00896 PF01384 Phosphate transporter family IE4872_CH00898 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH00898 PF03466 LysR substrate binding domain IE4872_CH00899 PF02913 FAD linked oxidases, C-terminal domain IE4872_CH00899 PF01565 FAD binding domain IE4872_CH00900 PF01565 FAD binding domain IE4872_CH00901 PF13183 4Fe-4S dicluster domain IE4872_CH00901 PF02754 Cysteine-rich domain IE4872_CH00903 PF17969 L,D-transpeptidase C-terminal domain IE4872_CH00903 PF01476 LysM domain IE4872_CH00903 PF03734 L,D-transpeptidase catalytic domain IE4872_CH00904 PF17969 L,D-transpeptidase C-terminal domain IE4872_CH00904 PF03734 L,D-transpeptidase catalytic domain IE4872_CH00905 PF03352 Methyladenine glycosylase IE4872_CH00908 PF00248 Aldo/keto reductase family IE4872_CH00914 PF03129 Anticodon binding domain IE4872_CH00914 PF13393 Histidyl-tRNA synthetase IE4872_CH00915 PF13393 Histidyl-tRNA synthetase IE4872_CH00916 PF01634 ATP phosphoribosyltransferase IE4872_CH00917 PF07681 DoxX IE4872_CH00918 PF00043 Glutathione S-transferase, C-terminal domain IE4872_CH00918 PF02798 Glutathione S-transferase, N-terminal domain IE4872_CH00921 PF07282 Putative transposase DNA-binding domain IE4872_CH00921 PF01385 Probable transposase IE4872_CH00921 PF12323 Helix-turn-helix domain IE4872_CH00923 PF00118 TCP-1/cpn60 chaperonin family IE4872_CH00924 PF00166 Chaperonin 10 Kd subunit IE4872_CH00926 PF01687 Riboflavin kinase IE4872_CH00926 PF06574 FAD synthetase IE4872_CH00927 PF00133 tRNA synthetases class I (I, L, M and V) IE4872_CH00927 PF08264 Anticodon-binding domain of tRNA IE4872_CH00930 PF14437 MafB19-like deaminase IE4872_CH00931 PF00849 RNA pseudouridylate synthase IE4872_CH00931 PF01479 S4 domain IE4872_CH00933 PF01734 Patatin-like phospholipase IE4872_CH00934 PF00999 Sodium/hydrogen exchanger family IE4872_CH00934 PF02254 TrkA-N domain IE4872_CH00935 PF01523 Putative modulator of DNA gyrase IE4872_CH00936 PF00459 Inositol monophosphatase family IE4872_CH00938 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IE4872_CH00939 PF13419 Haloacid dehalogenase-like hydrolase IE4872_CH00940 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IE4872_CH00942 PF08676 MutL C terminal dimerisation domain IE4872_CH00942 PF01119 DNA mismatch repair protein, C-terminal domain IE4872_CH00943 PF00072 Response regulator receiver domain IE4872_CH00943 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH00944 PF08447 PAS fold IE4872_CH00944 PF08448 PAS fold IE4872_CH00944 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH00944 PF00563 EAL domain IE4872_CH00947 PF08450 SMP-30/Gluconolactonase/LRE-like region IE4872_CH00948 PF01081 KDPG and KHG aldolase IE4872_CH00949 PF05035 2-keto-3-deoxy-galactonokinase IE4872_CH00951 PF09339 IclR helix-turn-helix domain IE4872_CH00951 PF01614 Bacterial transcriptional regulator IE4872_CH00952 PF03472 Autoinducer binding domain IE4872_CH00952 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH00955 PF10609 NUBPL iron-transfer P-loop NTPase IE4872_CH00955 PF01883 Iron-sulfur cluster assembly protein IE4872_CH00956 PF01544 CorA-like Mg2+ transporter protein IE4872_CH00957 PF02705 K+ potassium transporter IE4872_CH00959 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter IE4872_CH00960 PF00119 ATP synthase A chain IE4872_CH00961 PF00137 ATP synthase subunit C IE4872_CH00962 PF00430 ATP synthase B/B' CF(0) IE4872_CH00963 PF00430 ATP synthase B/B' CF(0) IE4872_CH00966 PF01351 Ribonuclease HII IE4872_CH00970 PF00994 Probable molybdopterin binding domain IE4872_CH00971 PF08544 GHMP kinases C terminal IE4872_CH00971 PF00288 GHMP kinases N terminal domain IE4872_CH00973 PF00348 Polyprenyl synthetase IE4872_CH00976 PF01566 Natural resistance-associated macrophage protein IE4872_CH00977 PF01343 Peptidase family S49 IE4872_CH00977 PF06965 Na+/H+ antiporter 1 IE4872_CH00979 PF02091 Glycyl-tRNA synthetase alpha subunit IE4872_CH00980 PF04011 LemA family IE4872_CH00981 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IE4872_CH00983 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IE4872_CH00983 PF02843 Phosphoribosylglycinamide synthetase, C domain IE4872_CH00983 PF02844 Phosphoribosylglycinamide synthetase, N domain IE4872_CH00985 PF04463 Protein of unknown function (DUF523) IE4872_CH00986 PF05746 DALR anticodon binding domain IE4872_CH00986 PF02092 Glycyl-tRNA synthetase beta subunit IE4872_CH00987 PF16921 Tex protein YqgF-like domain IE4872_CH00987 PF09371 Tex-like protein N-terminal domain IE4872_CH00987 PF00575 S1 RNA binding domain IE4872_CH00987 PF17674 HHH domain IE4872_CH00991 PF01040 UbiA prenyltransferase family IE4872_CH00994 PF01565 FAD binding domain IE4872_CH00994 PF02913 FAD linked oxidases, C-terminal domain IE4872_CH00995 PF03481 Putative GTP-binding controlling metal-binding IE4872_CH00995 PF01300 Telomere recombination IE4872_CH00997 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IE4872_CH00997 PF00355 Rieske [2Fe-2S] domain IE4872_CH00998 PF07886 BA14K-like protein IE4872_CH01001 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_CH01001 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_CH01001 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_CH01001 PF12806 Acetyl-CoA dehydrogenase C-terminal like IE4872_CH01002 PF00378 Enoyl-CoA hydratase/isomerase IE4872_CH01003 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH01003 PF00672 HAMP domain IE4872_CH01003 PF02743 Cache domain IE4872_CH01004 PF05958 tRNA (Uracil-5-)-methyltransferase IE4872_CH01005 PF01728 FtsJ-like methyltransferase IE4872_CH01005 PF01479 S4 domain IE4872_CH01006 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH01006 PF00672 HAMP domain IE4872_CH01007 PF02779 Transketolase, pyrimidine binding domain IE4872_CH01007 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IE4872_CH01007 PF02780 Transketolase, C-terminal domain IE4872_CH01008 PF02678 Pirin IE4872_CH01008 PF05726 Pirin C-terminal cupin domain IE4872_CH01010 PF02609 Exonuclease VII small subunit IE4872_CH01011 PF00850 Histone deacetylase domain IE4872_CH01013 PF02632 BioY family IE4872_CH01014 PF02361 Cobalt transport protein IE4872_CH01015 PF00005 ABC transporter IE4872_CH01016 PF06224 Winged helix DNA-binding domain IE4872_CH01017 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IE4872_CH01017 PF00925 GTP cyclohydrolase II IE4872_CH01018 PF01264 Chorismate synthase IE4872_CH01019 PF03707 Bacterial signalling protein N terminal repeat IE4872_CH01019 PF00563 EAL domain IE4872_CH01019 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH01021 PF00300 Histidine phosphatase superfamily (branch 1) IE4872_CH01023 PF00684 DnaJ central domain IE4872_CH01023 PF01556 DnaJ C terminal domain IE4872_CH01023 PF00226 DnaJ domain IE4872_CH01025 PF01243 Pyridoxamine 5'-phosphate oxidase IE4872_CH01025 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IE4872_CH01027 PF07943 Penicillin-binding protein 5, C-terminal domain IE4872_CH01027 PF00768 D-alanyl-D-alanine carboxypeptidase IE4872_CH01030 PF01523 Putative modulator of DNA gyrase IE4872_CH01032 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IE4872_CH01032 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IE4872_CH01033 PF00115 Cytochrome C and Quinol oxidase polypeptide I IE4872_CH01034 PF01040 UbiA prenyltransferase family IE4872_CH01036 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IE4872_CH01037 PF00510 Cytochrome c oxidase subunit III IE4872_CH01040 PF02104 SURF1 family IE4872_CH01041 PF02401 LytB protein IE4872_CH01042 PF01636 Phosphotransferase enzyme family IE4872_CH01043 PF00075 RNase H IE4872_CH01045 PF07729 FCD domain IE4872_CH01045 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH01049 PF00005 ABC transporter IE4872_CH01051 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH01051 PF07729 FCD domain IE4872_CH01052 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_CH01052 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IE4872_CH01054 PF01297 Zinc-uptake complex component A periplasmic IE4872_CH01055 PF00950 ABC 3 transport family IE4872_CH01056 PF00005 ABC transporter IE4872_CH01057 PF01638 HxlR-like helix-turn-helix IE4872_CH01058 PF00106 short chain dehydrogenase IE4872_CH01059 PF00462 Glutaredoxin IE4872_CH01059 PF08534 Redoxin IE4872_CH01061 PF02622 Uncharacterized ACR, COG1678 IE4872_CH01062 PF15887 Putative zinc-binding metallo-peptidase IE4872_CH01062 PF10005 zinc-ribbon domain IE4872_CH01063 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH01063 PF00563 EAL domain IE4872_CH01063 PF03707 Bacterial signalling protein N terminal repeat IE4872_CH01064 PF13302 Acetyltransferase (GNAT) domain IE4872_CH01065 PF05193 Peptidase M16 inactive domain IE4872_CH01065 PF00675 Insulinase (Peptidase family M16) IE4872_CH01066 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_CH01066 PF14821 Threonine synthase N terminus IE4872_CH01068 PF13419 Haloacid dehalogenase-like hydrolase IE4872_CH01074 PF18755 Restriction Enzyme Adenine Methylase Associated IE4872_CH01074 PF01555 DNA methylase IE4872_CH01076 PF00730 HhH-GPD superfamily base excision DNA repair protein IE4872_CH01076 PF00633 Helix-hairpin-helix motif IE4872_CH01076 PF14815 NUDIX domain IE4872_CH01078 PF13462 Thioredoxin IE4872_CH01079 PF02463 RecF/RecN/SMC N terminal domain IE4872_CH01080 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IE4872_CH01080 PF02896 PEP-utilising enzyme, TIM barrel domain IE4872_CH01080 PF00391 PEP-utilising enzyme, mobile domain IE4872_CH01086 PF00753 Metallo-beta-lactamase superfamily IE4872_CH01086 PF16123 Hydroxyacylglutathione hydrolase C-terminus IE4872_CH01093 PF00669 Bacterial flagellin N-terminal helical region IE4872_CH01093 PF00700 Bacterial flagellin C-terminal helical region IE4872_CH01097 PF00248 Aldo/keto reductase family IE4872_CH01098 PF06719 AraC-type transcriptional regulator N-terminus IE4872_CH01098 PF12833 Helix-turn-helix domain IE4872_CH01100 PF00106 short chain dehydrogenase IE4872_CH01104 PF01425 Amidase IE4872_CH01106 PF06719 AraC-type transcriptional regulator N-terminus IE4872_CH01106 PF12833 Helix-turn-helix domain IE4872_CH01110 PF03466 LysR substrate binding domain IE4872_CH01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH01113 PF00106 short chain dehydrogenase IE4872_CH01114 PF00009 Elongation factor Tu GTP binding domain IE4872_CH01115 PF01507 Phosphoadenosine phosphosulfate reductase family IE4872_CH01116 PF01507 Phosphoadenosine phosphosulfate reductase family IE4872_CH01118 PF02082 Transcriptional regulator IE4872_CH01123 PF00732 GMC oxidoreductase IE4872_CH01123 PF05199 GMC oxidoreductase IE4872_CH01124 PF00171 Aldehyde dehydrogenase family IE4872_CH01125 PF13977 BetI-type transcriptional repressor, C-terminal IE4872_CH01125 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH01128 PF00563 EAL domain IE4872_CH01128 PF12792 CSS motif domain associated with EAL IE4872_CH01129 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_CH01129 PF16197 Ketoacyl-synthetase C-terminal extension IE4872_CH01129 PF00107 Zinc-binding dehydrogenase IE4872_CH01129 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH01129 PF14765 Polyketide synthase dehydratase IE4872_CH01129 PF00550 Phosphopantetheine attachment site IE4872_CH01129 PF08659 KR domain IE4872_CH01129 PF00698 Acyl transferase domain IE4872_CH01129 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_CH01131 PF07690 Major Facilitator Superfamily IE4872_CH01135 PF08220 DeoR-like helix-turn-helix domain IE4872_CH01135 PF00455 DeoR C terminal sensor domain IE4872_CH01137 PF14497 Glutathione S-transferase, C-terminal domain IE4872_CH01137 PF02798 Glutathione S-transferase, N-terminal domain IE4872_CH01139 PF03466 LysR substrate binding domain IE4872_CH01139 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH01141 PF02445 Quinolinate synthetase A protein IE4872_CH01142 PF02910 Fumarate reductase flavoprotein C-term IE4872_CH01142 PF00890 FAD binding domain IE4872_CH01143 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IE4872_CH01143 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IE4872_CH01144 PF02798 Glutathione S-transferase, N-terminal domain IE4872_CH01148 PF01068 ATP dependent DNA ligase domain IE4872_CH01148 PF04679 ATP dependent DNA ligase C terminal region IE4872_CH01148 PF04675 DNA ligase N terminus IE4872_CH01151 PF03734 L,D-transpeptidase catalytic domain IE4872_CH01151 PF17969 L,D-transpeptidase C-terminal domain IE4872_CH01152 PF17969 L,D-transpeptidase C-terminal domain IE4872_CH01152 PF03734 L,D-transpeptidase catalytic domain IE4872_CH01153 PF12323 Helix-turn-helix domain IE4872_CH01153 PF01385 Probable transposase IE4872_CH01153 PF07282 Putative transposase DNA-binding domain IE4872_CH01155 PF07486 Cell Wall Hydrolase IE4872_CH01155 PF01471 Putative peptidoglycan binding domain IE4872_CH01156 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH01156 PF03466 LysR substrate binding domain IE4872_CH01157 PF07690 Major Facilitator Superfamily IE4872_CH01158 PF01047 MarR family IE4872_CH01159 PF02566 OsmC-like protein IE4872_CH01162 PF01047 MarR family IE4872_CH01165 PF18029 Glyoxalase-like domain IE4872_CH01165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_CH01166 PF16326 ABC transporter C-terminal domain IE4872_CH01166 PF12848 ABC transporter IE4872_CH01166 PF00005 ABC transporter IE4872_CH01167 PF08274 PhnA Zinc-Ribbon IE4872_CH01167 PF03831 PhnA domain IE4872_CH01168 PF05872 Bacterial protein of unknown function (DUF853) IE4872_CH01170 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IE4872_CH01170 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IE4872_CH01171 PF13649 Methyltransferase domain IE4872_CH01173 PF00857 Isochorismatase family IE4872_CH01176 PF00107 Zinc-binding dehydrogenase IE4872_CH01176 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH01177 PF01063 Amino-transferase class IV IE4872_CH01179 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH01180 PF06628 Catalase-related immune-responsive IE4872_CH01180 PF00199 Catalase IE4872_CH01180 PF18011 C-terminal domain found in long catalases IE4872_CH01181 PF00083 Sugar (and other) transporter IE4872_CH01181 PF07690 Major Facilitator Superfamily IE4872_CH01182 PF01925 Sulfite exporter TauE/SafE IE4872_CH01188 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IE4872_CH01188 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IE4872_CH01192 PF01810 LysE type translocator IE4872_CH01193 PF01322 Cytochrome C' IE4872_CH01194 PF00034 Cytochrome c IE4872_CH01199 PF02583 Metal-sensitive transcriptional repressor IE4872_CH01200 PF16916 Dimerisation domain of Zinc Transporter IE4872_CH01200 PF01545 Cation efflux family IE4872_CH01203 PF01011 PQQ enzyme repeat IE4872_CH01205 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IE4872_CH01210 PF00326 Prolyl oligopeptidase family IE4872_CH01210 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IE4872_CH01214 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_CH01216 PF03006 Haemolysin-III related IE4872_CH01217 PF00583 Acetyltransferase (GNAT) family IE4872_CH01218 PF01641 SelR domain IE4872_CH01221 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IE4872_CH01222 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IE4872_CH01224 PF01899 Na+/H+ ion antiporter subunit IE4872_CH01225 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IE4872_CH01226 PF03334 Na+/H+ antiporter subunit IE4872_CH01227 PF05443 ROS/MUCR transcriptional regulator protein IE4872_CH01228 PF02423 Ornithine cyclodeaminase/mu-crystallin family IE4872_CH01230 PF02082 Transcriptional regulator IE4872_CH01234 PF02657 Fe-S metabolism associated domain IE4872_CH01236 PF17264 Family of unknown function (DUF5330) IE4872_CH01237 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH01237 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH01243 PF02530 Porin subfamily IE4872_CH01246 PF00672 HAMP domain IE4872_CH01246 PF17200 Single Cache domain 2 IE4872_CH01246 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH01253 PF00912 Transglycosylase IE4872_CH01253 PF00905 Penicillin binding protein transpeptidase domain IE4872_CH01254 PF03692 Putative zinc- or iron-chelating domain IE4872_CH01260 PF00072 Response regulator receiver domain IE4872_CH01260 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH01261 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH01261 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH01261 PF00672 HAMP domain IE4872_CH01264 PF03100 CcmE IE4872_CH01265 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IE4872_CH01265 PF01578 Cytochrome C assembly protein IE4872_CH01266 PF03918 Cytochrome C biogenesis protein IE4872_CH01267 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH01270 PF13180 PDZ domain IE4872_CH01271 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH01271 PF00072 Response regulator receiver domain IE4872_CH01272 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH01272 PF00672 HAMP domain IE4872_CH01272 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH01273 PF03710 Glutamate-ammonia ligase adenylyltransferase IE4872_CH01273 PF08335 GlnD PII-uridylyltransferase IE4872_CH01274 PF00989 PAS fold IE4872_CH01274 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH01274 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH01275 PF01433 Peptidase family M1 domain IE4872_CH01275 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IE4872_CH01275 PF11940 Domain of unknown function (DUF3458) Ig-like fold IE4872_CH01276 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH01276 PF17202 Single cache domain 3 IE4872_CH01276 PF00672 HAMP domain IE4872_CH01282 PF00012 Hsp70 protein IE4872_CH01283 PF00873 AcrB/AcrD/AcrF family IE4872_CH01284 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IE4872_CH01289 PF01037 Lrp/AsnC ligand binding domain IE4872_CH01290 PF00571 CBS domain IE4872_CH01290 PF01769 Divalent cation transporter IE4872_CH01290 PF03448 MgtE intracellular N domain IE4872_CH01292 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH01292 PF00107 Zinc-binding dehydrogenase IE4872_CH01293 PF01638 HxlR-like helix-turn-helix IE4872_CH01294 PF07690 Major Facilitator Superfamily IE4872_CH01295 PF00781 Diacylglycerol kinase catalytic domain IE4872_CH01297 PF00120 Glutamine synthetase, catalytic domain IE4872_CH01298 PF00202 Aminotransferase class-III IE4872_CH01299 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase IE4872_CH01300 PF00535 Glycosyl transferase family 2 IE4872_CH01302 PF08281 Sigma-70, region 4 IE4872_CH01302 PF04542 Sigma-70 region 2 IE4872_CH01304 PF03795 YCII-related domain IE4872_CH01305 PF03795 YCII-related domain IE4872_CH01307 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus IE4872_CH01307 PF01048 Phosphorylase superfamily IE4872_CH01309 PF00043 Glutathione S-transferase, C-terminal domain IE4872_CH01309 PF02798 Glutathione S-transferase, N-terminal domain IE4872_CH01312 PF00155 Aminotransferase class I and II IE4872_CH01321 PF04962 KduI/IolB family IE4872_CH01322 PF01261 Xylose isomerase-like TIM barrel IE4872_CH01323 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IE4872_CH01323 PF00205 Thiamine pyrophosphate enzyme, central domain IE4872_CH01323 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IE4872_CH01324 PF00294 pfkB family carbohydrate kinase IE4872_CH01326 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH01326 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH01327 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH01327 PF14759 Reductase C-terminal IE4872_CH01329 PF02530 Porin subfamily IE4872_CH01330 PF12697 Alpha/beta hydrolase family IE4872_CH01331 PF14718 Soluble lytic murein transglycosylase L domain IE4872_CH01331 PF01464 Transglycosylase SLT domain IE4872_CH01332 PF00701 Dihydrodipicolinate synthetase family IE4872_CH01333 PF01668 SmpB protein IE4872_CH01336 PF01192 RNA polymerase Rpb6 IE4872_CH01337 PF04607 Region found in RelA / SpoT proteins IE4872_CH01337 PF13291 ACT domain IE4872_CH01337 PF02824 TGS domain IE4872_CH01339 PF01648 4'-phosphopantetheinyl transferase superfamily IE4872_CH01340 PF10502 Signal peptidase, peptidase S26 IE4872_CH01341 PF14622 Ribonuclease-III-like IE4872_CH01341 PF00035 Double-stranded RNA binding motif IE4872_CH01342 PF07650 KH domain IE4872_CH01342 PF01926 50S ribosome-binding GTPase IE4872_CH01344 PF02565 Recombination protein O C terminal IE4872_CH01344 PF11967 Recombination protein O N terminal IE4872_CH01347 PF01966 HD domain IE4872_CH01348 PF03707 Bacterial signalling protein N terminal repeat IE4872_CH01348 PF00563 EAL domain IE4872_CH01348 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH01348 PF13188 PAS domain IE4872_CH01350 PF00080 Copper/zinc superoxide dismutase (SODC) IE4872_CH01352 PF05552 Conserved TM helix IE4872_CH01352 PF00924 Mechanosensitive ion channel IE4872_CH01354 PF01966 HD domain IE4872_CH01355 PF01571 Aminomethyltransferase folate-binding domain IE4872_CH01359 PF00293 NUDIX domain IE4872_CH01360 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IE4872_CH01363 PF01066 CDP-alcohol phosphatidyltransferase IE4872_CH01364 PF02666 Phosphatidylserine decarboxylase IE4872_CH01365 PF00664 ABC transporter transmembrane region IE4872_CH01365 PF00005 ABC transporter IE4872_CH01366 PF01476 LysM domain IE4872_CH01367 PF03641 Possible lysine decarboxylase IE4872_CH01368 PF00892 EamA-like transporter family IE4872_CH01370 PF00682 HMGL-like IE4872_CH01370 PF08502 LeuA allosteric (dimerisation) domain IE4872_CH01371 PF00561 alpha/beta hydrolase fold IE4872_CH01375 PF01406 tRNA synthetases class I (C) catalytic domain IE4872_CH01377 PF01183 Glycosyl hydrolases family 25 IE4872_CH01378 PF00106 short chain dehydrogenase IE4872_CH01379 PF13537 Glutamine amidotransferase domain IE4872_CH01379 PF00156 Phosphoribosyl transferase domain IE4872_CH01380 PF02674 Colicin V production protein IE4872_CH01381 PF18073 Rubredoxin metal binding domain IE4872_CH01381 PF06745 KaiC IE4872_CH01382 PF01810 LysE type translocator IE4872_CH01383 PF01168 Alanine racemase, N-terminal domain IE4872_CH01383 PF00842 Alanine racemase, C-terminal domain IE4872_CH01384 PF03796 DnaB-like helicase C terminal domain IE4872_CH01384 PF00772 DnaB-like helicase N terminal domain IE4872_CH01386 PF03948 Ribosomal protein L9, C-terminal domain IE4872_CH01386 PF01281 Ribosomal protein L9, N-terminal domain IE4872_CH01388 PF01084 Ribosomal protein S18 IE4872_CH01389 PF01250 Ribosomal protein S6 IE4872_CH01391 PF00248 Aldo/keto reductase family IE4872_CH01392 PF00698 Acyl transferase domain IE4872_CH01394 PF00550 Phosphopantetheine attachment site IE4872_CH01395 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_CH01395 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_CH01396 PF02618 YceG-like family IE4872_CH01397 PF08340 Domain of unknown function (DUF1732) IE4872_CH01397 PF03755 YicC-like family, N-terminal region IE4872_CH01398 PF00625 Guanylate kinase IE4872_CH01399 PF00398 Ribosomal RNA adenine dimethylase IE4872_CH01400 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IE4872_CH01402 PF04453 LPS transport system D IE4872_CH01402 PF03968 OstA-like protein IE4872_CH01405 PF01569 PAP2 superfamily IE4872_CH01406 PF02789 Cytosol aminopeptidase family, N-terminal domain IE4872_CH01406 PF00883 Cytosol aminopeptidase family, catalytic domain IE4872_CH01409 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH01411 PF00334 Nucleoside diphosphate kinase IE4872_CH01415 PF02391 MoaE protein IE4872_CH01417 PF01066 CDP-alcohol phosphatidyltransferase IE4872_CH01418 PF01541 GIY-YIG catalytic domain IE4872_CH01418 PF12826 Helix-hairpin-helix motif IE4872_CH01418 PF02151 UvrB/uvrC motif IE4872_CH01418 PF08459 UvrC Helix-hairpin-helix N-terminal IE4872_CH01420 PF13505 Outer membrane protein beta-barrel domain IE4872_CH01422 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IE4872_CH01423 PF01568 Molydopterin dinucleotide binding domain IE4872_CH01423 PF00384 Molybdopterin oxidoreductase IE4872_CH01423 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IE4872_CH01424 PF00293 NUDIX domain IE4872_CH01426 PF00551 Formyl transferase IE4872_CH01427 PF02769 AIR synthase related protein, C-terminal domain IE4872_CH01427 PF00586 AIR synthase related protein, N-terminal domain IE4872_CH01428 PF01594 AI-2E family transporter IE4872_CH01430 PF13089 Polyphosphate kinase N-terminal domain IE4872_CH01430 PF17941 Polyphosphate kinase C-terminal domain 1 IE4872_CH01430 PF13090 Polyphosphate kinase C-terminal domain 2 IE4872_CH01430 PF02503 Polyphosphate kinase middle domain IE4872_CH01433 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH01434 PF00570 HRDC domain IE4872_CH01434 PF01612 3'-5' exonuclease IE4872_CH01436 PF00152 tRNA synthetases class II (D, K and N) IE4872_CH01436 PF01336 OB-fold nucleic acid binding domain IE4872_CH01436 PF02938 GAD domain IE4872_CH01438 PF00521 DNA gyrase/topoisomerase IV, subunit A IE4872_CH01438 PF03989 DNA gyrase C-terminal domain, beta-propeller IE4872_CH01441 PF04377 Arginine-tRNA-protein transferase, C terminus IE4872_CH01441 PF04376 Arginine-tRNA-protein transferase, N terminus IE4872_CH01443 PF00490 Delta-aminolevulinic acid dehydratase IE4872_CH01447 PF00464 Serine hydroxymethyltransferase IE4872_CH01448 PF03477 ATP cone domain IE4872_CH01449 PF01872 RibD C-terminal domain IE4872_CH01449 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IE4872_CH01450 PF00677 Lumazine binding domain IE4872_CH01455 PF00885 6,7-dimethyl-8-ribityllumazine synthase IE4872_CH01456 PF01029 NusB family IE4872_CH01457 PF03030 Inorganic H+ pyrophosphatase IE4872_CH01461 PF02504 Fatty acid synthesis protein IE4872_CH01462 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IE4872_CH01462 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IE4872_CH01463 PF00216 Bacterial DNA-binding protein IE4872_CH01464 PF13411 MerR HTH family regulatory protein IE4872_CH01466 PF13419 Haloacid dehalogenase-like hydrolase IE4872_CH01474 PF02397 Bacterial sugar transferase IE4872_CH01475 PF13439 Glycosyltransferase Family 4 IE4872_CH01475 PF00534 Glycosyl transferases group 1 IE4872_CH01477 PF02706 Chain length determinant protein IE4872_CH01480 PF02628 Cytochrome oxidase assembly protein IE4872_CH01482 PF01118 Semialdehyde dehydrogenase, NAD binding domain IE4872_CH01483 PF00491 Arginase family IE4872_CH01484 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IE4872_CH01485 PF01037 Lrp/AsnC ligand binding domain IE4872_CH01486 PF00380 Ribosomal protein S9/S16 IE4872_CH01487 PF00572 Ribosomal protein L13 IE4872_CH01489 PF00378 Enoyl-CoA hydratase/isomerase IE4872_CH01493 PF13380 CoA binding domain IE4872_CH01494 PF01053 Cys/Met metabolism PLP-dependent enzyme IE4872_CH01497 PF00106 short chain dehydrogenase IE4872_CH01498 PF00067 Cytochrome P450 IE4872_CH01499 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH01499 PF17158 Membrane-associated sensor, integral membrane domain IE4872_CH01500 PF00574 Clp protease IE4872_CH01501 PF07724 AAA domain (Cdc48 subfamily) IE4872_CH01501 PF10431 C-terminal, D2-small domain, of ClpB protein IE4872_CH01501 PF06689 ClpX C4-type zinc finger IE4872_CH01502 PF02190 ATP-dependent protease La (LON) substrate-binding domain IE4872_CH01502 PF00004 ATPase family associated with various cellular activities (AAA) IE4872_CH01502 PF05362 Lon protease (S16) C-terminal proteolytic domain IE4872_CH01503 PF00216 Bacterial DNA-binding protein IE4872_CH01504 PF00892 EamA-like transporter family IE4872_CH01506 PF00248 Aldo/keto reductase family IE4872_CH01510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IE4872_CH01511 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IE4872_CH01512 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IE4872_CH01513 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IE4872_CH01516 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IE4872_CH01516 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IE4872_CH01516 PF10531 SLBB domain IE4872_CH01517 PF00829 Ribosomal prokaryotic L21 protein IE4872_CH01518 PF00384 Molybdopterin oxidoreductase IE4872_CH01518 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IE4872_CH01518 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal IE4872_CH01519 PF00146 NADH dehydrogenase IE4872_CH01520 PF12838 4Fe-4S dicluster domain IE4872_CH01521 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IE4872_CH01522 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IE4872_CH01523 PF00361 Proton-conducting membrane transporter IE4872_CH01523 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IE4872_CH01524 PF00361 Proton-conducting membrane transporter IE4872_CH01524 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus IE4872_CH01525 PF00361 Proton-conducting membrane transporter IE4872_CH01526 PF03099 Biotin/lipoate A/B protein ligase family IE4872_CH01526 PF02237 Biotin protein ligase C terminal domain IE4872_CH01526 PF08279 HTH domain IE4872_CH01527 PF17770 Ribonuclease J C-terminal domain IE4872_CH01527 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IE4872_CH01527 PF12706 Beta-lactamase superfamily domain IE4872_CH01530 PF03129 Anticodon binding domain IE4872_CH01530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IE4872_CH01531 PF02687 FtsX-like permease family IE4872_CH01531 PF12704 MacB-like periplasmic core domain IE4872_CH01532 PF00005 ABC transporter IE4872_CH01535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IE4872_CH01535 PF14579 Helix-hairpin-helix motif IE4872_CH01535 PF02811 PHP domain IE4872_CH01535 PF07733 Bacterial DNA polymerase III alpha NTPase domain IE4872_CH01539 PF11799 impB/mucB/samB family C-terminal domain IE4872_CH01539 PF00817 impB/mucB/samB family IE4872_CH01544 PF00072 Response regulator receiver domain IE4872_CH01545 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH01545 PF00072 Response regulator receiver domain IE4872_CH01546 PF00471 Ribosomal protein L33 IE4872_CH01547 PF07690 Major Facilitator Superfamily IE4872_CH01549 PF08461 Ribonuclease R winged-helix domain IE4872_CH01549 PF08206 Ribonuclease B OB domain IE4872_CH01549 PF00773 RNB domain IE4872_CH01549 PF00575 S1 RNA binding domain IE4872_CH01549 PF17876 Cold shock domain IE4872_CH01550 PF01396 Topoisomerase DNA binding C4 zinc finger IE4872_CH01550 PF13368 Topoisomerase C-terminal repeat IE4872_CH01550 PF01751 Toprim domain IE4872_CH01550 PF01131 DNA topoisomerase IE4872_CH01553 PF02660 Glycerol-3-phosphate acyltransferase IE4872_CH01554 PF01979 Amidohydrolase family IE4872_CH01555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IE4872_CH01555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IE4872_CH01556 PF18158 Adaptive response protein AidB N-terminal domain IE4872_CH01556 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_CH01556 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_CH01560 PF03652 Holliday junction resolvase IE4872_CH01562 PF02686 Glu-tRNAGln amidotransferase C subunit IE4872_CH01563 PF01425 Amidase IE4872_CH01565 PF09857 Putative toxin of bacterial toxin-antitoxin pair IE4872_CH01568 PF02934 GatB/GatE catalytic domain IE4872_CH01568 PF02637 GatB domain IE4872_CH01572 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) IE4872_CH01573 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IE4872_CH01574 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_CH01574 PF02785 Biotin carboxylase C-terminal domain IE4872_CH01574 PF00289 Biotin carboxylase, N-terminal domain IE4872_CH01575 PF00364 Biotin-requiring enzyme IE4872_CH01576 PF01220 Dehydroquinase class II IE4872_CH01578 PF00155 Aminotransferase class I and II IE4872_CH01579 PF12111 Polyribonucleotide phosphorylase C terminal IE4872_CH01579 PF10150 Ribonuclease E/G family IE4872_CH01579 PF00575 S1 RNA binding domain IE4872_CH01581 PF01520 N-acetylmuramoyl-L-alanine amidase IE4872_CH01581 PF11741 AMIN domain IE4872_CH01582 PF00905 Penicillin binding protein transpeptidase domain IE4872_CH01582 PF00912 Transglycosylase IE4872_CH01582 PF17092 Penicillin-binding protein OB-like domain IE4872_CH01584 PF00472 RF-1 domain IE4872_CH01584 PF03462 PCRF domain IE4872_CH01585 PF01636 Phosphotransferase enzyme family IE4872_CH01586 PF00005 ABC transporter IE4872_CH01586 PF00664 ABC transporter transmembrane region IE4872_CH01588 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH01588 PF03466 LysR substrate binding domain IE4872_CH01590 PF01513 ATP-NAD kinase IE4872_CH01620 PF00589 Phage integrase family IE4872_CH01631 PF08032 RNA 2'-O ribose methyltransferase substrate binding IE4872_CH01631 PF00588 SpoU rRNA Methylase family IE4872_CH01636 PF03144 Elongation factor Tu domain 2 IE4872_CH01636 PF00009 Elongation factor Tu GTP binding domain IE4872_CH01636 PF03143 Elongation factor Tu C-terminal domain IE4872_CH01640 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IE4872_CH01641 PF02357 Transcription termination factor nusG IE4872_CH01641 PF00467 KOW motif IE4872_CH01642 PF03946 Ribosomal protein L11, N-terminal domain IE4872_CH01642 PF00298 Ribosomal protein L11, RNA binding domain IE4872_CH01643 PF00687 Ribosomal protein L1p/L10e family IE4872_CH01645 PF00466 Ribosomal protein L10 IE4872_CH01646 PF16320 Ribosomal protein L7/L12 dimerisation domain IE4872_CH01646 PF00542 Ribosomal protein L7/L12 C-terminal domain IE4872_CH01647 PF10385 RNA polymerase beta subunit external 1 domain IE4872_CH01647 PF04563 RNA polymerase beta subunit IE4872_CH01647 PF04561 RNA polymerase Rpb2, domain 2 IE4872_CH01647 PF04565 RNA polymerase Rpb2, domain 3 IE4872_CH01647 PF00562 RNA polymerase Rpb2, domain 6 IE4872_CH01647 PF04560 RNA polymerase Rpb2, domain 7 IE4872_CH01648 PF05000 RNA polymerase Rpb1, domain 4 IE4872_CH01648 PF00623 RNA polymerase Rpb1, domain 2 IE4872_CH01648 PF04983 RNA polymerase Rpb1, domain 3 IE4872_CH01648 PF04997 RNA polymerase Rpb1, domain 1 IE4872_CH01648 PF04998 RNA polymerase Rpb1, domain 5 IE4872_CH01652 PF00164 Ribosomal protein S12/S23 IE4872_CH01653 PF00177 Ribosomal protein S7p/S5e IE4872_CH01654 PF00009 Elongation factor Tu GTP binding domain IE4872_CH01654 PF00679 Elongation factor G C-terminus IE4872_CH01654 PF14492 Elongation Factor G, domain II IE4872_CH01654 PF03764 Elongation factor G, domain IV IE4872_CH01654 PF03144 Elongation factor Tu domain 2 IE4872_CH01655 PF03143 Elongation factor Tu C-terminal domain IE4872_CH01655 PF00009 Elongation factor Tu GTP binding domain IE4872_CH01655 PF03144 Elongation factor Tu domain 2 IE4872_CH01656 PF00338 Ribosomal protein S10p/S20e IE4872_CH01657 PF00297 Ribosomal protein L3 IE4872_CH01658 PF00573 Ribosomal protein L4/L1 family IE4872_CH01659 PF00276 Ribosomal protein L23 IE4872_CH01660 PF00181 Ribosomal Proteins L2, RNA binding domain IE4872_CH01660 PF03947 Ribosomal Proteins L2, C-terminal domain IE4872_CH01661 PF00203 Ribosomal protein S19 IE4872_CH01662 PF00237 Ribosomal protein L22p/L17e IE4872_CH01663 PF07650 KH domain IE4872_CH01663 PF00189 Ribosomal protein S3, C-terminal domain IE4872_CH01664 PF00252 Ribosomal protein L16p/L10e IE4872_CH01665 PF00831 Ribosomal L29 protein IE4872_CH01666 PF00366 Ribosomal protein S17 IE4872_CH01667 PF00238 Ribosomal protein L14p/L23e IE4872_CH01668 PF00467 KOW motif IE4872_CH01668 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IE4872_CH01669 PF00673 ribosomal L5P family C-terminus IE4872_CH01669 PF00281 Ribosomal protein L5 IE4872_CH01670 PF00253 Ribosomal protein S14p/S29e IE4872_CH01671 PF00410 Ribosomal protein S8 IE4872_CH01672 PF00347 Ribosomal protein L6 IE4872_CH01673 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IE4872_CH01674 PF00333 Ribosomal protein S5, N-terminal domain IE4872_CH01674 PF03719 Ribosomal protein S5, C-terminal domain IE4872_CH01675 PF00327 Ribosomal protein L30p/L7e IE4872_CH01676 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IE4872_CH01677 PF00344 SecY translocase IE4872_CH01678 PF05191 Adenylate kinase, active site lid IE4872_CH01679 PF00416 Ribosomal protein S13/S18 IE4872_CH01680 PF00411 Ribosomal protein S11 IE4872_CH01681 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IE4872_CH01681 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IE4872_CH01681 PF01000 RNA polymerase Rpb3/RpoA insert domain IE4872_CH01682 PF01196 Ribosomal protein L17 IE4872_CH01683 PF01794 Ferric reductase like transmembrane component IE4872_CH01684 PF00174 Oxidoreductase molybdopterin binding domain IE4872_CH01685 PF00920 Dehydratase family IE4872_CH01688 PF00595 PDZ domain IE4872_CH01689 PF12002 MgsA AAA+ ATPase C terminal IE4872_CH01689 PF00004 ATPase family associated with various cellular activities (AAA) IE4872_CH01689 PF16193 AAA C-terminal domain IE4872_CH01692 PF02558 Ketopantoate reductase PanE/ApbA IE4872_CH01692 PF08546 Ketopantoate reductase PanE/ApbA C terminal IE4872_CH01694 PF00091 Tubulin/FtsZ family, GTPase domain IE4872_CH01694 PF12327 FtsZ family, C-terminal domain IE4872_CH01695 PF00106 short chain dehydrogenase IE4872_CH01696 PF03466 LysR substrate binding domain IE4872_CH01696 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH01698 PF09364 XFP N-terminal domain IE4872_CH01698 PF09363 XFP C-terminal domain IE4872_CH01698 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase IE4872_CH01699 PF00871 Acetokinase family IE4872_CH01706 PF13454 FAD-NAD(P)-binding IE4872_CH01707 PF01348 Type II intron maturase IE4872_CH01707 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IE4872_CH01710 PF00005 ABC transporter IE4872_CH01711 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH01712 PF13407 Periplasmic binding protein domain IE4872_CH01713 PF01261 Xylose isomerase-like TIM barrel IE4872_CH01714 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH01714 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH01715 PF01261 Xylose isomerase-like TIM barrel IE4872_CH01717 PF00294 pfkB family carbohydrate kinase IE4872_CH01718 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IE4872_CH01718 PF00205 Thiamine pyrophosphate enzyme, central domain IE4872_CH01718 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IE4872_CH01719 PF04962 KduI/IolB family IE4872_CH01720 PF14552 Tautomerase enzyme IE4872_CH01721 PF02867 Ribonucleotide reductase, barrel domain IE4872_CH01721 PF08471 Class II vitamin B12-dependent ribonucleotide reductase IE4872_CH01723 PF00156 Phosphoribosyl transferase domain IE4872_CH01725 PF00994 Probable molybdopterin binding domain IE4872_CH01725 PF02464 Competence-damaged protein IE4872_CH01725 PF18146 Damage-inducible protein CinA KH domain IE4872_CH01726 PF03358 NADPH-dependent FMN reductase IE4872_CH01730 PF01699 Sodium/calcium exchanger protein IE4872_CH01731 PF03616 Sodium/glutamate symporter IE4872_CH01734 PF00585 C-terminal regulatory domain of Threonine dehydratase IE4872_CH01734 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_CH01736 PF08448 PAS fold IE4872_CH01736 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH01737 PF02525 Flavodoxin-like fold IE4872_CH01738 PF03466 LysR substrate binding domain IE4872_CH01738 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH01739 PF00149 Calcineurin-like phosphoesterase IE4872_CH01739 PF02872 5'-nucleotidase, C-terminal domain IE4872_CH01742 PF01037 Lrp/AsnC ligand binding domain IE4872_CH01743 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IE4872_CH01743 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IE4872_CH01746 PF00581 Rhodanese-like domain IE4872_CH01747 PF01411 tRNA synthetases class II (A) IE4872_CH01747 PF02272 DHHA1 domain IE4872_CH01747 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IE4872_CH01748 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_CH01748 PF00571 CBS domain IE4872_CH01785 PF10458 Valyl tRNA synthetase tRNA binding arm IE4872_CH01785 PF00133 tRNA synthetases class I (I, L, M and V) IE4872_CH01785 PF08264 Anticodon-binding domain of tRNA IE4872_CH01788 PF08238 Sel1 repeat IE4872_CH01790 PF01521 Iron-sulphur cluster biosynthesis IE4872_CH01791 PF01966 HD domain IE4872_CH01791 PF13286 Phosphohydrolase-associated domain IE4872_CH01792 PF03485 Arginyl tRNA synthetase N terminal domain IE4872_CH01792 PF05746 DALR anticodon binding domain IE4872_CH01792 PF00750 tRNA synthetases class I (R) IE4872_CH01794 PF00933 Glycosyl hydrolase family 3 N terminal domain IE4872_CH01795 PF02616 Segregation and condensation protein ScpA IE4872_CH01796 PF04079 Segregation and condensation complex subunit ScpB IE4872_CH01797 PF02416 mttA/Hcf106 family IE4872_CH01798 PF02416 mttA/Hcf106 family IE4872_CH01799 PF00902 Sec-independent protein translocase protein (TatC) IE4872_CH01800 PF02403 Seryl-tRNA synthetase N-terminal domain IE4872_CH01800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IE4872_CH01801 PF01975 Survival protein SurE IE4872_CH01803 PF08525 Opacity-associated protein A N-terminal motif IE4872_CH01803 PF01476 LysM domain IE4872_CH01803 PF01551 Peptidase family M23 IE4872_CH01805 PF02699 Preprotein translocase subunit IE4872_CH01806 PF02355 Protein export membrane protein IE4872_CH01806 PF07549 SecD/SecF GG Motif IE4872_CH01810 PF01134 Glucose inhibited division protein A IE4872_CH01813 PF00529 HlyD membrane-fusion protein of T1SS IE4872_CH01814 PF00664 ABC transporter transmembrane region IE4872_CH01814 PF00005 ABC transporter IE4872_CH01817 PF00072 Response regulator receiver domain IE4872_CH01817 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH01819 PF16363 GDP-mannose 4,6 dehydratase IE4872_CH01820 PF16363 GDP-mannose 4,6 dehydratase IE4872_CH01821 PF07238 PilZ domain IE4872_CH01821 PF03552 Cellulose synthase IE4872_CH01821 PF00535 Glycosyl transferase family 2 IE4872_CH01830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IE4872_CH01830 PF05698 Bacterial trigger factor protein (TF) C-terminus IE4872_CH01830 PF05697 Bacterial trigger factor protein (TF) IE4872_CH01831 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IE4872_CH01831 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH01835 PF00248 Aldo/keto reductase family IE4872_CH01836 PF03466 LysR substrate binding domain IE4872_CH01836 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH01837 PF13426 PAS domain IE4872_CH01837 PF07536 HWE histidine kinase IE4872_CH01837 PF13581 Histidine kinase-like ATPase domain IE4872_CH01838 PF00557 Metallopeptidase family M24 IE4872_CH01841 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH01845 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus IE4872_CH01847 PF00155 Aminotransferase class I and II IE4872_CH01848 PF01842 ACT domain IE4872_CH01848 PF00742 Homoserine dehydrogenase IE4872_CH01848 PF03447 Homoserine dehydrogenase, NAD binding domain IE4872_CH01849 PF02272 DHHA1 domain IE4872_CH01849 PF17768 RecJ OB domain IE4872_CH01849 PF01368 DHH family IE4872_CH01850 PF00483 Nucleotidyl transferase IE4872_CH01851 PF04321 RmlD substrate binding domain IE4872_CH01852 PF16363 GDP-mannose 4,6 dehydratase IE4872_CH01853 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IE4872_CH01855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IE4872_CH01857 PF00132 Bacterial transferase hexapeptide (six repeats) IE4872_CH01867 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH01869 PF03796 DnaB-like helicase C terminal domain IE4872_CH01876 PF02811 PHP domain IE4872_CH01876 PF07733 Bacterial DNA polymerase III alpha NTPase domain IE4872_CH01876 PF14579 Helix-hairpin-helix motif IE4872_CH01876 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IE4872_CH01880 PF00313 'Cold-shock' DNA-binding domain IE4872_CH01891 PF13289 SIR2-like domain IE4872_CH01898 PF06480 FtsH Extracellular IE4872_CH01898 PF01434 Peptidase family M41 IE4872_CH01898 PF00004 ATPase family associated with various cellular activities (AAA) IE4872_CH01898 PF17862 AAA+ lid domain IE4872_CH01901 PF00034 Cytochrome c IE4872_CH01901 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IE4872_CH01909 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH01909 PF03466 LysR substrate binding domain IE4872_CH01911 PF00132 Bacterial transferase hexapeptide (six repeats) IE4872_CH01917 PF00005 ABC transporter IE4872_CH01918 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH01919 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH01920 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_CH01921 PF01053 Cys/Met metabolism PLP-dependent enzyme IE4872_CH01922 PF01494 FAD binding domain IE4872_CH01924 PF00561 alpha/beta hydrolase fold IE4872_CH01925 PF00132 Bacterial transferase hexapeptide (six repeats) IE4872_CH01925 PF06426 Serine acetyltransferase, N-terminal IE4872_CH01929 PF02617 ATP-dependent Clp protease adaptor protein ClpS IE4872_CH01930 PF07724 AAA domain (Cdc48 subfamily) IE4872_CH01930 PF00004 ATPase family associated with various cellular activities (AAA) IE4872_CH01930 PF17871 AAA lid domain IE4872_CH01930 PF02861 Clp amino terminal domain, pathogenicity island component IE4872_CH01930 PF10431 C-terminal, D2-small domain, of ClpB protein IE4872_CH01931 PF01230 HIT domain IE4872_CH01937 PF00149 Calcineurin-like phosphoesterase IE4872_CH01938 PF00318 Ribosomal protein S2 IE4872_CH01939 PF00318 Ribosomal protein S2 IE4872_CH01940 PF00889 Elongation factor TS IE4872_CH01941 PF00696 Amino acid kinase family IE4872_CH01942 PF01765 Ribosome recycling factor IE4872_CH01943 PF01255 Putative undecaprenyl diphosphate synthase IE4872_CH01945 PF17820 PDZ domain IE4872_CH01945 PF02163 Peptidase family M50 IE4872_CH01946 PF01103 Surface antigen IE4872_CH01946 PF07244 Surface antigen variable number repeat IE4872_CH01947 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IE4872_CH01947 PF00132 Bacterial transferase hexapeptide (six repeats) IE4872_CH01948 PF07977 FabA-like domain IE4872_CH01949 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IE4872_CH01949 PF00132 Bacterial transferase hexapeptide (six repeats) IE4872_CH01950 PF06230 LpxI C-terminal domain IE4872_CH01950 PF17930 LpxI N-terminal domain IE4872_CH01951 PF02684 Lipid-A-disaccharide synthetase IE4872_CH01952 PF00285 Citrate synthase, C-terminal domain IE4872_CH01955 PF01726 LexA DNA binding domain IE4872_CH01955 PF00717 Peptidase S24-like IE4872_CH01957 PF00793 DAHP synthetase I family IE4872_CH01958 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH01958 PF00672 HAMP domain IE4872_CH01959 PF03952 Enolase, N-terminal domain IE4872_CH01959 PF00113 Enolase, C-terminal TIM barrel domain IE4872_CH01961 PF00676 Dehydrogenase E1 component IE4872_CH01962 PF00364 Biotin-requiring enzyme IE4872_CH01962 PF02779 Transketolase, pyrimidine binding domain IE4872_CH01962 PF02780 Transketolase, C-terminal domain IE4872_CH01963 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IE4872_CH01963 PF00364 Biotin-requiring enzyme IE4872_CH01963 PF02817 e3 binding domain IE4872_CH01966 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IE4872_CH01966 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH01969 PF04055 Radical SAM superfamily IE4872_CH01969 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IE4872_CH01971 PF03364 Polyketide cyclase / dehydrase and lipid transport IE4872_CH01972 PF02464 Competence-damaged protein IE4872_CH01973 PF02542 YgbB family IE4872_CH01973 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IE4872_CH01974 PF01207 Dihydrouridine synthase (Dus) IE4872_CH01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH01975 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH01975 PF00989 PAS fold IE4872_CH01976 PF00072 Response regulator receiver domain IE4872_CH01976 PF00158 Sigma-54 interaction domain IE4872_CH01976 PF02954 Bacterial regulatory protein, Fis family IE4872_CH01977 PF00989 PAS fold IE4872_CH01977 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH01977 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH01977 PF00672 HAMP domain IE4872_CH01978 PF00158 Sigma-54 interaction domain IE4872_CH01978 PF00072 Response regulator receiver domain IE4872_CH01978 PF02954 Bacterial regulatory protein, Fis family IE4872_CH01979 PF01063 Amino-transferase class IV IE4872_CH01980 PF17209 Hfq protein IE4872_CH01981 PF01926 50S ribosome-binding GTPase IE4872_CH01981 PF16360 GTP-binding GTPase Middle Region IE4872_CH01981 PF13167 GTP-binding GTPase N-terminal IE4872_CH01982 PF03819 MazG nucleotide pyrophosphohydrolase domain IE4872_CH01984 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IE4872_CH01984 PF14824 Sirohaem biosynthesis protein central IE4872_CH01984 PF10414 Sirohaem synthase dimerisation region IE4872_CH01986 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IE4872_CH01986 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IE4872_CH01988 PF01494 FAD binding domain IE4872_CH01989 PF02683 Cytochrome C biogenesis protein transmembrane region IE4872_CH01993 PF02311 AraC-like ligand binding domain IE4872_CH01993 PF12833 Helix-turn-helix domain IE4872_CH01999 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IE4872_CH01999 PF00529 HlyD membrane-fusion protein of T1SS IE4872_CH02000 PF12704 MacB-like periplasmic core domain IE4872_CH02000 PF02687 FtsX-like permease family IE4872_CH02000 PF00005 ABC transporter IE4872_CH02001 PF00005 ABC transporter IE4872_CH02001 PF02687 FtsX-like permease family IE4872_CH02001 PF12704 MacB-like periplasmic core domain IE4872_CH02002 PF00701 Dihydrodipicolinate synthetase family IE4872_CH02004 PF00175 Oxidoreductase NAD-binding domain IE4872_CH02004 PF00970 Oxidoreductase FAD-binding domain IE4872_CH02006 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH02006 PF00107 Zinc-binding dehydrogenase IE4872_CH02007 PF00005 ABC transporter IE4872_CH02010 PF02608 ABC transporter substrate-binding protein PnrA-like IE4872_CH02011 PF13407 Periplasmic binding protein domain IE4872_CH02012 PF00005 ABC transporter IE4872_CH02013 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH02014 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH02015 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH02015 PF07729 FCD domain IE4872_CH02016 PF00132 Bacterial transferase hexapeptide (six repeats) IE4872_CH02016 PF12804 MobA-like NTP transferase domain IE4872_CH02017 PF01380 SIS domain IE4872_CH02019 PF00270 DEAD/DEAH box helicase IE4872_CH02019 PF17191 RecG wedge domain IE4872_CH02019 PF00271 Helicase conserved C-terminal domain IE4872_CH02021 PF03461 TRCF domain IE4872_CH02021 PF00271 Helicase conserved C-terminal domain IE4872_CH02021 PF02559 CarD-like/TRCF domain IE4872_CH02021 PF00270 DEAD/DEAH box helicase IE4872_CH02021 PF17757 UvrB interaction domain IE4872_CH02023 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_CH02026 PF03951 Glutamine synthetase, beta-Grasp domain IE4872_CH02026 PF00120 Glutamine synthetase, catalytic domain IE4872_CH02027 PF00543 Nitrogen regulatory protein P-II IE4872_CH02028 PF03853 YjeF-related protein N-terminus IE4872_CH02028 PF01256 Carbohydrate kinase IE4872_CH02030 PF17755 UvrA DNA-binding domain IE4872_CH02030 PF17760 UvrA interaction domain IE4872_CH02031 PF00436 Single-strand binding protein family IE4872_CH02032 PF02417 Chromate transporter IE4872_CH02033 PF09828 Chromate resistance exported protein IE4872_CH02034 PF01914 MarC family integral membrane protein IE4872_CH02035 PF00521 DNA gyrase/topoisomerase IV, subunit A IE4872_CH02035 PF03989 DNA gyrase C-terminal domain, beta-propeller IE4872_CH02040 PF01467 Cytidylyltransferase-like IE4872_CH02041 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IE4872_CH02042 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IE4872_CH02043 PF02547 Queuosine biosynthesis protein IE4872_CH02044 PF01702 Queuine tRNA-ribosyltransferase IE4872_CH02050 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH02054 PF01022 Bacterial regulatory protein, arsR family IE4872_CH02055 PF00665 Integrase core domain IE4872_CH02055 PF13936 Helix-turn-helix domain IE4872_CH02056 PF07690 Major Facilitator Superfamily IE4872_CH02057 PF01209 ubiE/COQ5 methyltransferase family IE4872_CH02058 PF03099 Biotin/lipoate A/B protein ligase family IE4872_CH02058 PF12706 Beta-lactamase superfamily domain IE4872_CH02059 PF01026 TatD related DNase IE4872_CH02060 PF09334 tRNA synthetases class I (M) IE4872_CH02060 PF08264 Anticodon-binding domain of tRNA IE4872_CH02061 PF01925 Sulfite exporter TauE/SafE IE4872_CH02062 PF09115 DNA polymerase III, delta subunit, C terminal IE4872_CH02063 PF02223 Thymidylate kinase IE4872_CH02065 PF05036 Sporulation related domain IE4872_CH02065 PF03330 Lytic transglycolase IE4872_CH02076 PF00591 Glycosyl transferase family, a/b domain IE4872_CH02076 PF02885 Glycosyl transferase family, helical bundle domain IE4872_CH02077 PF00218 Indole-3-glycerol phosphate synthase IE4872_CH02078 PF01967 MoaC family IE4872_CH02079 PF03454 MoeA C-terminal region (domain IV) IE4872_CH02079 PF03453 MoeA N-terminal region (domain I and II) IE4872_CH02079 PF00994 Probable molybdopterin binding domain IE4872_CH02082 PF00271 Helicase conserved C-terminal domain IE4872_CH02082 PF00270 DEAD/DEAH box helicase IE4872_CH02082 PF03880 DbpA RNA binding domain IE4872_CH02085 PF00285 Citrate synthase, C-terminal domain IE4872_CH02086 PF00285 Citrate synthase, C-terminal domain IE4872_CH02088 PF00117 Glutamine amidotransferase class-I IE4872_CH02088 PF06418 CTP synthase N-terminus IE4872_CH02089 PF03840 Preprotein translocase SecG subunit IE4872_CH02090 PF00121 Triosephosphate isomerase IE4872_CH02092 PF01751 Toprim domain IE4872_CH02092 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH02092 PF00986 DNA gyrase B subunit, carboxyl terminus IE4872_CH02092 PF00204 DNA gyrase B IE4872_CH02095 PF01594 AI-2E family transporter IE4872_CH02096 PF00583 Acetyltransferase (GNAT) family IE4872_CH02103 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IE4872_CH02103 PF03129 Anticodon binding domain IE4872_CH02103 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IE4872_CH02103 PF02824 TGS domain IE4872_CH02105 PF01809 Putative membrane protein insertion efficiency factor IE4872_CH02107 PF01227 GTP cyclohydrolase I IE4872_CH02108 PF01502 Phosphoribosyl-AMP cyclohydrolase IE4872_CH02109 PF01734 Patatin-like phospholipase IE4872_CH02110 PF00571 CBS domain IE4872_CH02110 PF03448 MgtE intracellular N domain IE4872_CH02110 PF01769 Divalent cation transporter IE4872_CH02114 PF00561 alpha/beta hydrolase fold IE4872_CH02117 PF00768 D-alanyl-D-alanine carboxypeptidase IE4872_CH02117 PF07943 Penicillin-binding protein 5, C-terminal domain IE4872_CH02120 PF03315 Serine dehydratase beta chain IE4872_CH02120 PF03313 Serine dehydratase alpha chain IE4872_CH02124 PF09278 MerR, DNA binding IE4872_CH02124 PF00376 MerR family regulatory protein IE4872_CH02125 PF00571 CBS domain IE4872_CH02125 PF01769 Divalent cation transporter IE4872_CH02125 PF03448 MgtE intracellular N domain IE4872_CH02127 PF01327 Polypeptide deformylase IE4872_CH02130 PF03099 Biotin/lipoate A/B protein ligase family IE4872_CH02133 PF00364 Biotin-requiring enzyme IE4872_CH02133 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_CH02133 PF00289 Biotin carboxylase, N-terminal domain IE4872_CH02133 PF02785 Biotin carboxylase C-terminal domain IE4872_CH02135 PF00107 Zinc-binding dehydrogenase IE4872_CH02135 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH02136 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IE4872_CH02137 PF00756 Putative esterase IE4872_CH02138 PF00893 Small Multidrug Resistance protein IE4872_CH02139 PF07681 DoxX IE4872_CH02140 PF01039 Carboxyl transferase domain IE4872_CH02143 PF13419 Haloacid dehalogenase-like hydrolase IE4872_CH02144 PF00849 RNA pseudouridylate synthase IE4872_CH02144 PF01479 S4 domain IE4872_CH02145 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IE4872_CH02150 PF01571 Aminomethyltransferase folate-binding domain IE4872_CH02150 PF08669 Glycine cleavage T-protein C-terminal barrel domain IE4872_CH02151 PF01597 Glycine cleavage H-protein IE4872_CH02152 PF02347 Glycine cleavage system P-protein IE4872_CH02154 PF00460 Flagella basal body rod protein IE4872_CH02154 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IE4872_CH02154 PF07559 Flagellar basal body protein FlaE IE4872_CH02156 PF01521 Iron-sulphur cluster biosynthesis IE4872_CH02157 PF01883 Iron-sulfur cluster assembly protein IE4872_CH02158 PF00266 Aminotransferase class-V IE4872_CH02159 PF01458 Uncharacterized protein family (UPF0051) IE4872_CH02160 PF00005 ABC transporter IE4872_CH02161 PF01458 Uncharacterized protein family (UPF0051) IE4872_CH02162 PF00266 Aminotransferase class-V IE4872_CH02163 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IE4872_CH02165 PF03702 Anhydro-N-acetylmuramic acid kinase IE4872_CH02166 PF00579 tRNA synthetases class I (W and Y) IE4872_CH02168 PF00578 AhpC/TSA family IE4872_CH02169 PF04305 Protein of unknown function (DUF455) IE4872_CH02170 PF10145 Phage-related minor tail protein IE4872_CH02170 PF01464 Transglycosylase SLT domain IE4872_CH02170 PF01551 Peptidase family M23 IE4872_CH02171 PF00270 DEAD/DEAH box helicase IE4872_CH02171 PF00271 Helicase conserved C-terminal domain IE4872_CH02175 PF13478 XdhC Rossmann domain IE4872_CH02175 PF02625 XdhC and CoxI family IE4872_CH02178 PF05362 Lon protease (S16) C-terminal proteolytic domain IE4872_CH02178 PF02190 ATP-dependent protease La (LON) substrate-binding domain IE4872_CH02178 PF00004 ATPase family associated with various cellular activities (AAA) IE4872_CH02179 PF01613 Flavin reductase like domain IE4872_CH02181 PF00834 Ribulose-phosphate 3 epimerase family IE4872_CH02183 PF00206 Lyase IE4872_CH02183 PF10397 Adenylosuccinate lyase C-terminus IE4872_CH02187 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH02187 PF03707 Bacterial signalling protein N terminal repeat IE4872_CH02187 PF00563 EAL domain IE4872_CH02188 PF01259 SAICAR synthetase IE4872_CH02189 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase IE4872_CH02193 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH02193 PF00155 Aminotransferase class I and II IE4872_CH02195 PF00586 AIR synthase related protein, N-terminal domain IE4872_CH02195 PF02769 AIR synthase related protein, C-terminal domain IE4872_CH02195 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IE4872_CH02199 PF00462 Glutaredoxin IE4872_CH02200 PF07690 Major Facilitator Superfamily IE4872_CH02201 PF07690 Major Facilitator Superfamily IE4872_CH02204 PF00459 Inositol monophosphatase family IE4872_CH02205 PF01171 PP-loop family IE4872_CH02206 PF04960 Glutaminase IE4872_CH02207 PF00163 Ribosomal protein S4/S9 N-terminal domain IE4872_CH02207 PF01479 S4 domain IE4872_CH02210 PF01177 Asp/Glu/Hydantoin racemase IE4872_CH02211 PF00588 SpoU rRNA Methylase family IE4872_CH02213 PF00180 Isocitrate/isopropylmalate dehydrogenase IE4872_CH02217 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IE4872_CH02217 PF01411 tRNA synthetases class II (A) IE4872_CH02217 PF02272 DHHA1 domain IE4872_CH02218 PF00154 recA bacterial DNA recombination protein IE4872_CH02219 PF00294 pfkB family carbohydrate kinase IE4872_CH02220 PF04227 Indigoidine synthase A like protein IE4872_CH02221 PF00072 Response regulator receiver domain IE4872_CH02221 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH02221 PF13188 PAS domain IE4872_CH02221 PF08448 PAS fold IE4872_CH02221 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH02223 PF01258 Prokaryotic dksA/traR C4-type zinc finger IE4872_CH02225 PF04317 YcjX-like family, DUF463 IE4872_CH02226 PF05128 Domain of unknown function (DUF697) IE4872_CH02228 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IE4872_CH02230 PF00809 Pterin binding enzyme IE4872_CH02232 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_CH02238 PF00005 ABC transporter IE4872_CH02239 PF02405 Permease MlaE IE4872_CH02240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IE4872_CH02240 PF13378 Enolase C-terminal domain-like IE4872_CH02241 PF12832 MFS_1 like family IE4872_CH02242 PF00583 Acetyltransferase (GNAT) family IE4872_CH02244 PF01515 Phosphate acetyl/butaryl transferase IE4872_CH02244 PF03949 Malic enzyme, NAD binding domain IE4872_CH02244 PF00390 Malic enzyme, N-terminal domain IE4872_CH02246 PF00881 Nitroreductase family IE4872_CH02247 PF07676 WD40-like Beta Propeller Repeat IE4872_CH02248 PF00795 Carbon-nitrogen hydrolase IE4872_CH02248 PF02540 NAD synthase IE4872_CH02249 PF00884 Sulfatase IE4872_CH02253 PF01474 Class-II DAHP synthetase family IE4872_CH02255 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH02255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IE4872_CH02257 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IE4872_CH02258 PF13419 Haloacid dehalogenase-like hydrolase IE4872_CH02259 PF03734 L,D-transpeptidase catalytic domain IE4872_CH02260 PF10415 Fumarase C C-terminus IE4872_CH02260 PF00206 Lyase IE4872_CH02262 PF05683 Fumarase C-terminus IE4872_CH02262 PF05681 Fumarate hydratase (Fumerase) IE4872_CH02264 PF17158 Membrane-associated sensor, integral membrane domain IE4872_CH02264 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH02267 PF01047 MarR family IE4872_CH02268 PF06772 Bacterial low temperature requirement A protein (LtrA) IE4872_CH02270 PF04055 Radical SAM superfamily IE4872_CH02270 PF06463 Molybdenum Cofactor Synthesis C IE4872_CH02272 PF05532 CsbD-like IE4872_CH02276 PF12804 MobA-like NTP transferase domain IE4872_CH02277 PF03205 Molybdopterin guanine dinucleotide synthesis protein B IE4872_CH02278 PF00691 OmpA family IE4872_CH02278 PF01389 OmpA-like transmembrane domain IE4872_CH02279 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_CH02280 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02281 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02282 PF06233 Usg-like family IE4872_CH02287 PF00005 ABC transporter IE4872_CH02288 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02289 PF00296 Luciferase-like monooxygenase IE4872_CH02290 PF09084 NMT1/THI5 like IE4872_CH02291 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IE4872_CH02291 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_CH02293 PF01037 Lrp/AsnC ligand binding domain IE4872_CH02294 PF03167 Uracil DNA glycosylase superfamily IE4872_CH02296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH02296 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH02296 PF00989 PAS fold IE4872_CH02298 PF01219 Prokaryotic diacylglycerol kinase IE4872_CH02299 PF02277 Phosphoribosyltransferase IE4872_CH02300 PF02654 Cobalamin-5-phosphate synthase IE4872_CH02310 PF01061 ABC-2 type transporter IE4872_CH02311 PF00005 ABC transporter IE4872_CH02312 PF01925 Sulfite exporter TauE/SafE IE4872_CH02316 PF17200 Single Cache domain 2 IE4872_CH02316 PF00672 HAMP domain IE4872_CH02316 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH02317 PF03061 Thioesterase superfamily IE4872_CH02323 PF00005 ABC transporter IE4872_CH02323 PF06472 ABC transporter transmembrane region 2 IE4872_CH02327 PF03795 YCII-related domain IE4872_CH02328 PF07690 Major Facilitator Superfamily IE4872_CH02330 PF17757 UvrB interaction domain IE4872_CH02330 PF12344 Ultra-violet resistance protein B IE4872_CH02330 PF00271 Helicase conserved C-terminal domain IE4872_CH02330 PF02151 UvrB/uvrC motif IE4872_CH02330 PF04851 Type III restriction enzyme, res subunit IE4872_CH02331 PF00684 DnaJ central domain IE4872_CH02331 PF01556 DnaJ C terminal domain IE4872_CH02331 PF00226 DnaJ domain IE4872_CH02332 PF00313 'Cold-shock' DNA-binding domain IE4872_CH02333 PF01207 Dihydrouridine synthase (Dus) IE4872_CH02338 PF00072 Response regulator receiver domain IE4872_CH02338 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH02339 PF01557 Fumarylacetoacetate (FAA) hydrolase family IE4872_CH02340 PF00132 Bacterial transferase hexapeptide (six repeats) IE4872_CH02341 PF01475 Ferric uptake regulator family IE4872_CH02342 PF00950 ABC 3 transport family IE4872_CH02343 PF00005 ABC transporter IE4872_CH02344 PF01297 Zinc-uptake complex component A periplasmic IE4872_CH02345 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH02345 PF00072 Response regulator receiver domain IE4872_CH02349 PF00583 Acetyltransferase (GNAT) family IE4872_CH02350 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IE4872_CH02350 PF04616 Glycosyl hydrolases family 43 IE4872_CH02351 PF00248 Aldo/keto reductase family IE4872_CH02352 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH02352 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH02355 PF00005 ABC transporter IE4872_CH02355 PF17912 MalK OB fold domain IE4872_CH02356 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02358 PF01547 Bacterial extracellular solute-binding protein IE4872_CH02361 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_CH02361 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IE4872_CH02366 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH02366 PF00107 Zinc-binding dehydrogenase IE4872_CH02367 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_CH02367 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_CH02369 PF07977 FabA-like domain IE4872_CH02370 PF00550 Phosphopantetheine attachment site IE4872_CH02371 PF03186 CobD/Cbib protein IE4872_CH02372 PF00155 Aminotransferase class I and II IE4872_CH02373 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IE4872_CH02373 PF07685 CobB/CobQ-like glutamine amidotransferase domain IE4872_CH02374 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IE4872_CH02375 PF01156 Inosine-uridine preferring nucleoside hydrolase IE4872_CH02376 PF01890 Cobalamin synthesis G C-terminus IE4872_CH02377 PF01925 Sulfite exporter TauE/SafE IE4872_CH02378 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IE4872_CH02379 PF02514 CobN/Magnesium Chelatase IE4872_CH02380 PF07683 Cobalamin synthesis protein cobW C-terminal domain IE4872_CH02380 PF02492 CobW/HypB/UreG, nucleotide-binding domain IE4872_CH02381 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IE4872_CH02383 PF00654 Voltage gated chloride channel IE4872_CH02384 PF07685 CobB/CobQ-like glutamine amidotransferase domain IE4872_CH02389 PF03466 LysR substrate binding domain IE4872_CH02389 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH02394 PF00072 Response regulator receiver domain IE4872_CH02394 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH02395 PF00072 Response regulator receiver domain IE4872_CH02395 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH02396 PF01895 PhoU domain IE4872_CH02397 PF00005 ABC transporter IE4872_CH02398 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02399 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02400 PF12849 PBP superfamily domain IE4872_CH02401 PF00005 ABC transporter IE4872_CH02403 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02404 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02412 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH02412 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH02413 PF00106 short chain dehydrogenase IE4872_CH02415 PF01548 Transposase IE4872_CH02415 PF02371 Transposase IS116/IS110/IS902 family IE4872_CH02416 PF00753 Metallo-beta-lactamase superfamily IE4872_CH02416 PF16123 Hydroxyacylglutathione hydrolase C-terminus IE4872_CH02417 PF00561 alpha/beta hydrolase fold IE4872_CH02419 PF00550 Phosphopantetheine attachment site IE4872_CH02419 PF08659 KR domain IE4872_CH02419 PF00107 Zinc-binding dehydrogenase IE4872_CH02419 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_CH02419 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_CH02419 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH02419 PF16197 Ketoacyl-synthetase C-terminal extension IE4872_CH02419 PF00698 Acyl transferase domain IE4872_CH02419 PF14765 Polyketide synthase dehydratase IE4872_CH02421 PF00106 short chain dehydrogenase IE4872_CH02424 PF02735 Ku70/Ku80 beta-barrel domain IE4872_CH02425 PF02735 Ku70/Ku80 beta-barrel domain IE4872_CH02429 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH02429 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH02429 PF13493 Domain of unknown function (DUF4118) IE4872_CH02429 PF00989 PAS fold IE4872_CH02429 PF13426 PAS domain IE4872_CH02429 PF08447 PAS fold IE4872_CH02432 PF00561 alpha/beta hydrolase fold IE4872_CH02433 PF00296 Luciferase-like monooxygenase IE4872_CH02436 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH02436 PF00072 Response regulator receiver domain IE4872_CH02437 PF03060 Nitronate monooxygenase IE4872_CH02442 PF00857 Isochorismatase family IE4872_CH02443 PF00171 Aldehyde dehydrogenase family IE4872_CH02448 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH02448 PF00072 Response regulator receiver domain IE4872_CH02449 PF08447 PAS fold IE4872_CH02449 PF13426 PAS domain IE4872_CH02449 PF13493 Domain of unknown function (DUF4118) IE4872_CH02449 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH02449 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH02449 PF00989 PAS fold IE4872_CH02450 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH02450 PF00072 Response regulator receiver domain IE4872_CH02451 PF06441 Epoxide hydrolase N terminus IE4872_CH02456 PF00892 EamA-like transporter family IE4872_CH02457 PF00565 Staphylococcal nuclease homologue IE4872_CH02461 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH02461 PF16859 Tetracyclin repressor-like, C-terminal domain IE4872_CH02465 PF03734 L,D-transpeptidase catalytic domain IE4872_CH02467 PF07731 Multicopper oxidase IE4872_CH02467 PF07732 Multicopper oxidase IE4872_CH02467 PF00394 Multicopper oxidase IE4872_CH02468 PF01757 Acyltransferase family IE4872_CH02469 PF00313 'Cold-shock' DNA-binding domain IE4872_CH02471 PF00873 AcrB/AcrD/AcrF family IE4872_CH02478 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH02478 PF16701 Adenylate cyclase regulatory domain IE4872_CH02479 PF00403 Heavy-metal-associated domain IE4872_CH02480 PF00376 MerR family regulatory protein IE4872_CH02480 PF09278 MerR, DNA binding IE4872_CH02488 PF09335 SNARE associated Golgi protein IE4872_CH02496 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH02496 PF00072 Response regulator receiver domain IE4872_CH02499 PF01965 DJ-1/PfpI family IE4872_CH02499 PF12833 Helix-turn-helix domain IE4872_CH02500 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH02500 PF00072 Response regulator receiver domain IE4872_CH02503 PF12794 Mechanosensitive ion channel inner membrane domain 1 IE4872_CH02503 PF00924 Mechanosensitive ion channel IE4872_CH02503 PF12795 Mechanosensitive ion channel porin domain IE4872_CH02505 PF13426 PAS domain IE4872_CH02505 PF07568 Histidine kinase IE4872_CH02505 PF13581 Histidine kinase-like ATPase domain IE4872_CH02506 PF07690 Major Facilitator Superfamily IE4872_CH02508 PF00892 EamA-like transporter family IE4872_CH02516 PF02567 Phenazine biosynthesis-like protein IE4872_CH02519 PF08402 TOBE domain IE4872_CH02519 PF00005 ABC transporter IE4872_CH02520 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02522 PF00248 Aldo/keto reductase family IE4872_CH02523 PF00155 Aminotransferase class I and II IE4872_CH02526 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IE4872_CH02526 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IE4872_CH02528 PF12833 Helix-turn-helix domain IE4872_CH02528 PF06719 AraC-type transcriptional regulator N-terminus IE4872_CH02530 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH02530 PF00107 Zinc-binding dehydrogenase IE4872_CH02531 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH02532 PF01037 Lrp/AsnC ligand binding domain IE4872_CH02533 PF01177 Asp/Glu/Hydantoin racemase IE4872_CH02534 PF00583 Acetyltransferase (GNAT) family IE4872_CH02534 PF01047 MarR family IE4872_CH02535 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH02536 PF07690 Major Facilitator Superfamily IE4872_CH02537 PF01638 HxlR-like helix-turn-helix IE4872_CH02539 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IE4872_CH02541 PF13411 MerR HTH family regulatory protein IE4872_CH02542 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain IE4872_CH02542 PF14490 Helix-hairpin-helix containing domain IE4872_CH02542 PF13538 UvrD-like helicase C-terminal domain IE4872_CH02544 PF12848 ABC transporter IE4872_CH02544 PF16326 ABC transporter C-terminal domain IE4872_CH02544 PF00005 ABC transporter IE4872_CH02546 PF08281 Sigma-70, region 4 IE4872_CH02546 PF04542 Sigma-70 region 2 IE4872_CH02549 PF02211 Nitrile hydratase beta subunit IE4872_CH02550 PF02979 Nitrile hydratase, alpha chain IE4872_CH02554 PF01810 LysE type translocator IE4872_CH02555 PF00248 Aldo/keto reductase family IE4872_CH02556 PF10369 Small subunit of acetolactate synthase IE4872_CH02557 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IE4872_CH02557 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IE4872_CH02557 PF00205 Thiamine pyrophosphate enzyme, central domain IE4872_CH02563 PF13180 PDZ domain IE4872_CH02565 PF01145 SPFH domain / Band 7 family IE4872_CH02566 PF01145 SPFH domain / Band 7 family IE4872_CH02567 PF00186 Dihydrofolate reductase IE4872_CH02570 PF00303 Thymidylate synthase IE4872_CH02575 PF02913 FAD linked oxidases, C-terminal domain IE4872_CH02575 PF01565 FAD binding domain IE4872_CH02576 PF00248 Aldo/keto reductase family IE4872_CH02577 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH02577 PF03466 LysR substrate binding domain IE4872_CH02578 PF05145 Transition state regulatory protein AbrB IE4872_CH02581 PF13488 Glycine zipper IE4872_CH02581 PF00691 OmpA family IE4872_CH02582 PF00700 Bacterial flagellin C-terminal helical region IE4872_CH02582 PF00669 Bacterial flagellin N-terminal helical region IE4872_CH02583 PF00873 AcrB/AcrD/AcrF family IE4872_CH02584 PF13533 Biotin-lipoyl like IE4872_CH02585 PF00580 UvrD/REP helicase N-terminal domain IE4872_CH02585 PF13361 UvrD-like helicase C-terminal domain IE4872_CH02588 PF00857 Isochorismatase family IE4872_CH02592 PF00557 Metallopeptidase family M24 IE4872_CH02592 PF01321 Creatinase/Prolidase N-terminal domain IE4872_CH02595 PF01494 FAD binding domain IE4872_CH02596 PF02630 SCO1/SenC IE4872_CH02597 PF01584 CheW-like domain IE4872_CH02602 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IE4872_CH02602 PF00533 BRCA1 C Terminus (BRCT) domain IE4872_CH02602 PF03120 NAD-dependent DNA ligase OB-fold domain IE4872_CH02602 PF01653 NAD-dependent DNA ligase adenylation domain IE4872_CH02602 PF12826 Helix-hairpin-helix motif IE4872_CH02603 PF02463 RecF/RecN/SMC N terminal domain IE4872_CH02604 PF13525 Outer membrane lipoprotein IE4872_CH02605 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IE4872_CH02606 PF12327 FtsZ family, C-terminal domain IE4872_CH02606 PF00091 Tubulin/FtsZ family, GTPase domain IE4872_CH02607 PF02491 SHS2 domain inserted in FTSA IE4872_CH02608 PF08478 POTRA domain, FtsQ-type IE4872_CH02608 PF03799 Cell division protein FtsQ IE4872_CH02609 PF01820 D-ala D-ala ligase N-terminus IE4872_CH02609 PF07478 D-ala D-ala ligase C-terminus IE4872_CH02610 PF00230 Major intrinsic protein IE4872_CH02611 PF07690 Major Facilitator Superfamily IE4872_CH02611 PF00083 Sugar (and other) transporter IE4872_CH02612 PF01565 FAD binding domain IE4872_CH02612 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IE4872_CH02613 PF01225 Mur ligase family, catalytic domain IE4872_CH02613 PF08245 Mur ligase middle domain IE4872_CH02613 PF02875 Mur ligase family, glutamate ligase domain IE4872_CH02614 PF03033 Glycosyltransferase family 28 N-terminal domain IE4872_CH02614 PF04101 Glycosyltransferase family 28 C-terminal domain IE4872_CH02615 PF01098 Cell cycle protein IE4872_CH02616 PF08245 Mur ligase middle domain IE4872_CH02617 PF00953 Glycosyl transferase family 4 IE4872_CH02617 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IE4872_CH02618 PF02875 Mur ligase family, glutamate ligase domain IE4872_CH02618 PF01225 Mur ligase family, catalytic domain IE4872_CH02618 PF08245 Mur ligase middle domain IE4872_CH02619 PF02875 Mur ligase family, glutamate ligase domain IE4872_CH02619 PF08245 Mur ligase middle domain IE4872_CH02619 PF01225 Mur ligase family, catalytic domain IE4872_CH02620 PF03717 Penicillin-binding Protein dimerisation domain IE4872_CH02620 PF00905 Penicillin binding protein transpeptidase domain IE4872_CH02622 PF01795 MraW methylase family IE4872_CH02623 PF02381 MraZ protein, putative antitoxin-like IE4872_CH02627 PF01510 N-acetylmuramoyl-L-alanine amidase IE4872_CH02628 PF05099 Tellurite resistance protein TerB IE4872_CH02628 PF00226 DnaJ domain IE4872_CH02629 PF00365 Phosphofructokinase IE4872_CH02630 PF01810 LysE type translocator IE4872_CH02635 PF01795 MraW methylase family IE4872_CH02636 PF01183 Glycosyl hydrolases family 25 IE4872_CH02638 PF02219 Methylenetetrahydrofolate reductase IE4872_CH02639 PF01209 ubiE/COQ5 methyltransferase family IE4872_CH02640 PF12848 ABC transporter IE4872_CH02640 PF00005 ABC transporter IE4872_CH02641 PF08241 Methyltransferase domain IE4872_CH02643 PF00561 alpha/beta hydrolase fold IE4872_CH02644 PF00892 EamA-like transporter family IE4872_CH02645 PF02515 CoA-transferase family III IE4872_CH02646 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IE4872_CH02646 PF00205 Thiamine pyrophosphate enzyme, central domain IE4872_CH02646 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IE4872_CH02647 PF01042 Endoribonuclease L-PSP IE4872_CH02650 PF03734 L,D-transpeptidase catalytic domain IE4872_CH02650 PF01476 LysM domain IE4872_CH02651 PF13614 AAA domain IE4872_CH02652 PF00465 Iron-containing alcohol dehydrogenase IE4872_CH02653 PF00171 Aldehyde dehydrogenase family IE4872_CH02654 PF03951 Glutamine synthetase, beta-Grasp domain IE4872_CH02654 PF00120 Glutamine synthetase, catalytic domain IE4872_CH02657 PF01418 Helix-turn-helix domain, rpiR family IE4872_CH02657 PF01380 SIS domain IE4872_CH02661 PF00005 ABC transporter IE4872_CH02661 PF08402 TOBE domain IE4872_CH02662 PF08402 TOBE domain IE4872_CH02662 PF00005 ABC transporter IE4872_CH02663 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH02663 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH02664 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02667 PF01869 BadF/BadG/BcrA/BcrD ATPase family IE4872_CH02670 PF02574 Homocysteine S-methyltransferase IE4872_CH02670 PF02607 B12 binding domain IE4872_CH02670 PF02310 B12 binding domain IE4872_CH02670 PF00809 Pterin binding enzyme IE4872_CH02670 PF02965 Vitamin B12 dependent methionine synthase, activation domain IE4872_CH02672 PF03928 Haem-degrading IE4872_CH02675 PF04402 Protein of unknown function (DUF541) IE4872_CH02678 PF03170 Bacterial cellulose synthase subunit IE4872_CH02678 PF07238 PilZ domain IE4872_CH02678 PF00535 Glycosyl transferase family 2 IE4872_CH02678 PF03552 Cellulose synthase IE4872_CH02681 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH02685 PF05199 GMC oxidoreductase IE4872_CH02685 PF00732 GMC oxidoreductase IE4872_CH02687 PF00732 GMC oxidoreductase IE4872_CH02687 PF05199 GMC oxidoreductase IE4872_CH02689 PF00378 Enoyl-CoA hydratase/isomerase IE4872_CH02690 PF01144 Coenzyme A transferase IE4872_CH02691 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH02691 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH02692 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IE4872_CH02692 PF00356 Bacterial regulatory proteins, lacI family IE4872_CH02694 PF01894 Uncharacterised protein family UPF0047 IE4872_CH02695 PF07237 Protein of unknown function (DUF1428) IE4872_CH02697 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02698 PF00005 ABC transporter IE4872_CH02698 PF00571 CBS domain IE4872_CH02700 PF00892 EamA-like transporter family IE4872_CH02705 PF04545 Sigma-70, region 4 IE4872_CH02705 PF04539 Sigma-70 region 3 IE4872_CH02705 PF04542 Sigma-70 region 2 IE4872_CH02705 PF00140 Sigma-70 factor, region 1.2 IE4872_CH02705 PF03979 Sigma-70 factor, region 1.1 IE4872_CH02705 PF04546 Sigma-70, non-essential region IE4872_CH02708 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH02708 PF00107 Zinc-binding dehydrogenase IE4872_CH02709 PF00155 Aminotransferase class I and II IE4872_CH02711 PF00270 DEAD/DEAH box helicase IE4872_CH02711 PF00570 HRDC domain IE4872_CH02711 PF09382 RQC domain IE4872_CH02711 PF16124 RecQ zinc-binding IE4872_CH02711 PF00271 Helicase conserved C-terminal domain IE4872_CH02712 PF08275 DNA primase catalytic core, N-terminal domain IE4872_CH02712 PF10410 DnaB-helicase binding domain of primase IE4872_CH02712 PF01807 CHC2 zinc finger IE4872_CH02712 PF08278 DNA primase DnaG DnaB-binding IE4872_CH02716 PF00117 Glutamine amidotransferase class-I IE4872_CH02716 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IE4872_CH02718 PF01554 MatE IE4872_CH02719 PF07690 Major Facilitator Superfamily IE4872_CH02720 PF00248 Aldo/keto reductase family IE4872_CH02721 PF04228 Putative neutral zinc metallopeptidase IE4872_CH02722 PF00107 Zinc-binding dehydrogenase IE4872_CH02722 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH02723 PF02142 MGS-like domain IE4872_CH02723 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_CH02723 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IE4872_CH02725 PF03449 Transcription elongation factor, N-terminal IE4872_CH02725 PF01272 Transcription elongation factor, GreA/GreB, C-term IE4872_CH02726 PF00534 Glycosyl transferases group 1 IE4872_CH02727 PF00534 Glycosyl transferases group 1 IE4872_CH02727 PF13439 Glycosyltransferase Family 4 IE4872_CH02728 PF01037 Lrp/AsnC ligand binding domain IE4872_CH02729 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH02730 PF03466 LysR substrate binding domain IE4872_CH02734 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IE4872_CH02735 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase IE4872_CH02742 PF07995 Glucose / Sorbosone dehydrogenase IE4872_CH02745 PF00313 'Cold-shock' DNA-binding domain IE4872_CH02747 PF00753 Metallo-beta-lactamase superfamily IE4872_CH02749 PF01063 Amino-transferase class IV IE4872_CH02750 PF12802 MarR family IE4872_CH02751 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH02751 PF00072 Response regulator receiver domain IE4872_CH02752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH02752 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH02752 PF00672 HAMP domain IE4872_CH02755 PF01588 Putative tRNA binding domain IE4872_CH02756 PF14748 Pyrroline-5-carboxylate reductase dimerisation IE4872_CH02756 PF03807 NADP oxidoreductase coenzyme F420-dependent IE4872_CH02759 PF01790 Prolipoprotein diacylglyceryl transferase IE4872_CH02764 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IE4872_CH02764 PF14572 Phosphoribosyl synthetase-associated domain IE4872_CH02768 PF01386 Ribosomal L25p family IE4872_CH02768 PF14693 Ribosomal protein TL5, C-terminal domain IE4872_CH02769 PF13188 PAS domain IE4872_CH02769 PF03707 Bacterial signalling protein N terminal repeat IE4872_CH02769 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH02769 PF00563 EAL domain IE4872_CH02771 PF01195 Peptidyl-tRNA hydrolase IE4872_CH02774 PF02617 ATP-dependent Clp protease adaptor protein ClpS IE4872_CH02775 PF06071 Protein of unknown function (DUF933) IE4872_CH02775 PF01926 50S ribosome-binding GTPase IE4872_CH02778 PF00156 Phosphoribosyl transferase domain IE4872_CH02779 PF00032 Cytochrome b(C-terminal)/b6/petD IE4872_CH02779 PF00033 Cytochrome b/b6/petB IE4872_CH02779 PF02167 Cytochrome C1 family IE4872_CH02780 PF00032 Cytochrome b(C-terminal)/b6/petD IE4872_CH02780 PF00033 Cytochrome b/b6/petB IE4872_CH02781 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IE4872_CH02781 PF00355 Rieske [2Fe-2S] domain IE4872_CH02782 PF00664 ABC transporter transmembrane region IE4872_CH02782 PF00005 ABC transporter IE4872_CH02784 PF00664 ABC transporter transmembrane region IE4872_CH02784 PF00005 ABC transporter IE4872_CH02785 PF00588 SpoU rRNA Methylase family IE4872_CH02786 PF02690 Na+/Pi-cotransporter IE4872_CH02788 PF01218 Coproporphyrinogen III oxidase IE4872_CH02791 PF01743 Poly A polymerase head domain IE4872_CH02791 PF12627 Probable RNA and SrmB- binding site of polymerase A IE4872_CH02791 PF13735 tRNA nucleotidyltransferase domain 2 putative IE4872_CH02792 PF00293 NUDIX domain IE4872_CH02794 PF17863 AAA lid domain IE4872_CH02794 PF07726 ATPase family associated with various cellular activities (AAA) IE4872_CH02798 PF07690 Major Facilitator Superfamily IE4872_CH02801 PF13409 Glutathione S-transferase, N-terminal domain IE4872_CH02802 PF13344 Haloacid dehalogenase-like hydrolase IE4872_CH02802 PF00293 NUDIX domain IE4872_CH02807 PF00107 Zinc-binding dehydrogenase IE4872_CH02807 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH02808 PF01638 HxlR-like helix-turn-helix IE4872_CH02809 PF00682 HMGL-like IE4872_CH02809 PF08502 LeuA allosteric (dimerisation) domain IE4872_CH02811 PF03594 Benzoate membrane transport protein IE4872_CH02812 PF00574 Clp protease IE4872_CH02814 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) IE4872_CH02815 PF14489 QueF-like protein IE4872_CH02816 PF01545 Cation efflux family IE4872_CH02816 PF16916 Dimerisation domain of Zinc Transporter IE4872_CH02819 PF00117 Glutamine amidotransferase class-I IE4872_CH02819 PF00425 chorismate binding enzyme IE4872_CH02819 PF04715 Anthranilate synthase component I, N terminal region IE4872_CH02820 PF07715 TonB-dependent Receptor Plug Domain IE4872_CH02820 PF00593 TonB dependent receptor IE4872_CH02823 PF01268 Formate--tetrahydrofolate ligase IE4872_CH02824 PF03472 Autoinducer binding domain IE4872_CH02824 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH02828 PF00265 Thymidine kinase IE4872_CH02829 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IE4872_CH02830 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02831 PF00005 ABC transporter IE4872_CH02831 PF00571 CBS domain IE4872_CH02833 PF01022 Bacterial regulatory protein, arsR family IE4872_CH02834 PF00202 Aminotransferase class-III IE4872_CH02836 PF13458 Periplasmic binding protein IE4872_CH02837 PF01979 Amidohydrolase family IE4872_CH02837 PF13382 Adenine deaminase C-terminal domain IE4872_CH02838 PF00128 Alpha amylase, catalytic domain IE4872_CH02839 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_CH02840 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02841 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_CH02841 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH02842 PF00005 ABC transporter IE4872_CH02842 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH02843 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH02843 PF00005 ABC transporter IE4872_CH02846 PF00294 pfkB family carbohydrate kinase IE4872_CH02847 PF13439 Glycosyltransferase Family 4 IE4872_CH02847 PF00534 Glycosyl transferases group 1 IE4872_CH02848 PF07859 alpha/beta hydrolase fold IE4872_CH02849 PF01047 MarR family IE4872_CH02851 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IE4872_CH02851 PF01926 50S ribosome-binding GTPase IE4872_CH02855 PF05992 SbmA/BacA-like family IE4872_CH02858 PF00557 Metallopeptidase family M24 IE4872_CH02861 PF04542 Sigma-70 region 2 IE4872_CH02861 PF08281 Sigma-70, region 4 IE4872_CH02862 PF03795 YCII-related domain IE4872_CH02863 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH02866 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IE4872_CH02866 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IE4872_CH02868 PF01799 [2Fe-2S] binding domain IE4872_CH02868 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_CH02869 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IE4872_CH02869 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_CH02872 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH02872 PF03466 LysR substrate binding domain IE4872_CH02875 PF01979 Amidohydrolase family IE4872_CH02877 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH02877 PF03466 LysR substrate binding domain IE4872_CH02878 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH02878 PF00107 Zinc-binding dehydrogenase IE4872_CH02879 PF01070 FMN-dependent dehydrogenase IE4872_CH02884 PF02735 Ku70/Ku80 beta-barrel domain IE4872_CH02886 PF00576 HIUase/Transthyretin family IE4872_CH02887 PF04115 Ureidoglycolate lyase IE4872_CH02890 PF03561 Allantoicase repeat IE4872_CH02891 PF01014 Uricase IE4872_CH02891 PF09349 OHCU decarboxylase IE4872_CH02895 PF12833 Helix-turn-helix domain IE4872_CH02895 PF12852 Cupin IE4872_CH02898 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IE4872_CH02898 PF01266 FAD dependent oxidoreductase IE4872_CH02899 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH02899 PF00672 HAMP domain IE4872_CH02899 PF00072 Response regulator receiver domain IE4872_CH02899 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IE4872_CH02899 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH02899 PF01627 Hpt domain IE4872_CH02901 PF00271 Helicase conserved C-terminal domain IE4872_CH02901 PF00270 DEAD/DEAH box helicase IE4872_CH02902 PF02310 B12 binding domain IE4872_CH02902 PF13282 Domain of unknown function (DUF4070) IE4872_CH02902 PF04055 Radical SAM superfamily IE4872_CH02904 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH02904 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH02907 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH02907 PF03466 LysR substrate binding domain IE4872_CH02909 PF13407 Periplasmic binding protein domain IE4872_CH02910 PF00005 ABC transporter IE4872_CH02911 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH02913 PF00171 Aldehyde dehydrogenase family IE4872_CH02914 PF00920 Dehydratase family IE4872_CH02916 PF05717 IS66 Orf2 like protein IE4872_CH02918 PF01739 CheR methyltransferase, SAM binding domain IE4872_CH02918 PF01339 CheB methylesterase IE4872_CH02918 PF03705 CheR methyltransferase, all-alpha domain IE4872_CH02918 PF08448 PAS fold IE4872_CH02920 PF01339 CheB methylesterase IE4872_CH02920 PF00072 Response regulator receiver domain IE4872_CH02927 PF04168 A predicted alpha-helical domain with a conserved ER motif. IE4872_CH02927 PF14403 Circularly permuted ATP-grasp type 2 IE4872_CH02928 PF14403 Circularly permuted ATP-grasp type 2 IE4872_CH02930 PF13407 Periplasmic binding protein domain IE4872_CH02931 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH02932 PF00005 ABC transporter IE4872_CH02934 PF01434 Peptidase family M41 IE4872_CH02934 PF17862 AAA+ lid domain IE4872_CH02934 PF06480 FtsH Extracellular IE4872_CH02934 PF00004 ATPase family associated with various cellular activities (AAA) IE4872_CH02945 PF00639 PPIC-type PPIASE domain IE4872_CH02956 PF13302 Acetyltransferase (GNAT) domain IE4872_CH02958 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH02961 PF05067 Manganese containing catalase IE4872_CH02965 PF00534 Glycosyl transferases group 1 IE4872_CH02965 PF13439 Glycosyltransferase Family 4 IE4872_CH02966 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH02967 PF03275 UDP-galactopyranose mutase IE4872_CH02977 PF08281 Sigma-70, region 4 IE4872_CH02977 PF04542 Sigma-70 region 2 IE4872_CH02984 PF01594 AI-2E family transporter IE4872_CH02986 PF02735 Ku70/Ku80 beta-barrel domain IE4872_CH02988 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH02989 PF00924 Mechanosensitive ion channel IE4872_CH02989 PF12795 Mechanosensitive ion channel porin domain IE4872_CH02989 PF12794 Mechanosensitive ion channel inner membrane domain 1 IE4872_CH02992 PF03358 NADPH-dependent FMN reductase IE4872_CH02993 PF03960 ArsC family IE4872_CH02994 PF00230 Major intrinsic protein IE4872_CH02995 PF01451 Low molecular weight phosphotyrosine protein phosphatase IE4872_CH02998 PF02321 Outer membrane efflux protein IE4872_CH02999 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH02999 PF00072 Response regulator receiver domain IE4872_CH03004 PF13193 AMP-binding enzyme C-terminal domain IE4872_CH03004 PF00501 AMP-binding enzyme IE4872_CH03004 PF00668 Condensation domain IE4872_CH03004 PF00550 Phosphopantetheine attachment site IE4872_CH03005 PF00668 Condensation domain IE4872_CH03005 PF00550 Phosphopantetheine attachment site IE4872_CH03005 PF00698 Acyl transferase domain IE4872_CH03005 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_CH03005 PF16197 Ketoacyl-synthetase C-terminal extension IE4872_CH03005 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_CH03009 PF02397 Bacterial sugar transferase IE4872_CH03011 PF13807 G-rich domain on putative tyrosine kinase IE4872_CH03011 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IE4872_CH03011 PF02706 Chain length determinant protein IE4872_CH03012 PF02563 Polysaccharide biosynthesis/export protein IE4872_CH03013 PF00534 Glycosyl transferases group 1 IE4872_CH03013 PF13439 Glycosyltransferase Family 4 IE4872_CH03014 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH03014 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH03015 PF02371 Transposase IS116/IS110/IS902 family IE4872_CH03015 PF01548 Transposase IE4872_CH03016 PF00893 Small Multidrug Resistance protein IE4872_CH03018 PF01152 Bacterial-like globin IE4872_CH03021 PF03992 Antibiotic biosynthesis monooxygenase IE4872_CH03028 PF01497 Periplasmic binding protein IE4872_CH03029 PF01032 FecCD transport family IE4872_CH03030 PF00005 ABC transporter IE4872_CH03034 PF08281 Sigma-70, region 4 IE4872_CH03034 PF04542 Sigma-70 region 2 IE4872_CH03036 PF00072 Response regulator receiver domain IE4872_CH03037 PF07536 HWE histidine kinase IE4872_CH03037 PF13426 PAS domain IE4872_CH03037 PF08447 PAS fold IE4872_CH03038 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH03038 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IE4872_CH03039 PF01180 Dihydroorotate dehydrogenase IE4872_CH03040 PF12833 Helix-turn-helix domain IE4872_CH03042 PF01544 CorA-like Mg2+ transporter protein IE4872_CH03043 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH03043 PF00107 Zinc-binding dehydrogenase IE4872_CH03044 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03044 PF03466 LysR substrate binding domain IE4872_CH03045 PF01590 GAF domain IE4872_CH03045 PF08446 PAS fold IE4872_CH03045 PF00360 Phytochrome region IE4872_CH03045 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH03046 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH03046 PF08362 YcdC-like protein, C-terminal region IE4872_CH03047 PF07687 Peptidase dimerisation domain IE4872_CH03047 PF01546 Peptidase family M20/M25/M40 IE4872_CH03049 PF01979 Amidohydrolase family IE4872_CH03051 PF00005 ABC transporter IE4872_CH03052 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03053 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03056 PF00873 AcrB/AcrD/AcrF family IE4872_CH03058 PF02492 CobW/HypB/UreG, nucleotide-binding domain IE4872_CH03059 PF01730 UreF IE4872_CH03060 PF05194 UreE urease accessory protein, C-terminal domain IE4872_CH03060 PF02814 UreE urease accessory protein, N-terminal domain IE4872_CH03061 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH03062 PF00449 Urease alpha-subunit, N-terminal domain IE4872_CH03062 PF01979 Amidohydrolase family IE4872_CH03064 PF07007 Lysozyme inhibitor LprI IE4872_CH03065 PF00699 Urease beta subunit IE4872_CH03066 PF06906 Protein of unknown function (DUF1272) IE4872_CH03067 PF00547 Urease, gamma subunit IE4872_CH03068 PF01774 UreD urease accessory protein IE4872_CH03069 PF00005 ABC transporter IE4872_CH03070 PF00005 ABC transporter IE4872_CH03070 PF12399 Branched-chain amino acid ATP-binding cassette transporter IE4872_CH03072 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH03075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH03075 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH03075 PF18415 Histidine kinase receptor ArcB trans-membrane domain IE4872_CH03075 PF01627 Hpt domain IE4872_CH03075 PF00989 PAS fold IE4872_CH03075 PF00072 Response regulator receiver domain IE4872_CH03076 PF00072 Response regulator receiver domain IE4872_CH03076 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH03079 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IE4872_CH03079 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_CH03080 PF13458 Periplasmic binding protein IE4872_CH03082 PF00005 ABC transporter IE4872_CH03083 PF00005 ABC transporter IE4872_CH03083 PF12399 Branched-chain amino acid ATP-binding cassette transporter IE4872_CH03084 PF11862 Domain of unknown function (DUF3382) IE4872_CH03084 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH03085 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH03090 PF00459 Inositol monophosphatase family IE4872_CH03093 PF00174 Oxidoreductase molybdopterin binding domain IE4872_CH03094 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03096 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03100 PF00691 OmpA family IE4872_CH03100 PF05736 OprF membrane domain IE4872_CH03102 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03106 PF02899 Phage integrase, N-terminal SAM-like domain IE4872_CH03106 PF00589 Phage integrase family IE4872_CH03109 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03115 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH03115 PF00072 Response regulator receiver domain IE4872_CH03117 PF10090 Histidine phosphotransferase C-terminal domain IE4872_CH03120 PF00588 SpoU rRNA Methylase family IE4872_CH03122 PF00849 RNA pseudouridylate synthase IE4872_CH03123 PF04542 Sigma-70 region 2 IE4872_CH03123 PF00140 Sigma-70 factor, region 1.2 IE4872_CH03123 PF04545 Sigma-70, region 4 IE4872_CH03126 PF00709 Adenylosuccinate synthetase IE4872_CH03131 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_CH03132 PF03167 Uracil DNA glycosylase superfamily IE4872_CH03133 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IE4872_CH03133 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IE4872_CH03133 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IE4872_CH03133 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IE4872_CH03134 PF01050 Mannose-6-phosphate isomerase IE4872_CH03134 PF00483 Nucleotidyl transferase IE4872_CH03135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IE4872_CH03135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IE4872_CH03135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IE4872_CH03136 PF16363 GDP-mannose 4,6 dehydratase IE4872_CH03137 PF00563 EAL domain IE4872_CH03137 PF03707 Bacterial signalling protein N terminal repeat IE4872_CH03137 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH03138 PF00920 Dehydratase family IE4872_CH03139 PF00873 AcrB/AcrD/AcrF family IE4872_CH03140 PF13533 Biotin-lipoyl like IE4872_CH03142 PF03466 LysR substrate binding domain IE4872_CH03142 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03144 PF00106 short chain dehydrogenase IE4872_CH03145 PF03466 LysR substrate binding domain IE4872_CH03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03146 PF02245 Methylpurine-DNA glycosylase (MPG) IE4872_CH03147 PF07690 Major Facilitator Superfamily IE4872_CH03148 PF00529 HlyD membrane-fusion protein of T1SS IE4872_CH03148 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IE4872_CH03150 PF13533 Biotin-lipoyl like IE4872_CH03151 PF00873 AcrB/AcrD/AcrF family IE4872_CH03152 PF01757 Acyltransferase family IE4872_CH03154 PF02563 Polysaccharide biosynthesis/export protein IE4872_CH03155 PF02397 Bacterial sugar transferase IE4872_CH03156 PF11089 Exopolysaccharide production repressor IE4872_CH03157 PF00535 Glycosyl transferase family 2 IE4872_CH03158 PF00535 Glycosyl transferase family 2 IE4872_CH03159 PF01757 Acyltransferase family IE4872_CH03160 PF00722 Glycosyl hydrolases family 16 IE4872_CH03161 PF00535 Glycosyl transferase family 2 IE4872_CH03162 PF00535 Glycosyl transferase family 2 IE4872_CH03163 PF00535 Glycosyl transferase family 2 IE4872_CH03164 PF13807 G-rich domain on putative tyrosine kinase IE4872_CH03164 PF02706 Chain length determinant protein IE4872_CH03164 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IE4872_CH03165 PF00149 Calcineurin-like phosphoesterase IE4872_CH03167 PF02082 Transcriptional regulator IE4872_CH03168 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH03168 PF07729 FCD domain IE4872_CH03169 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_CH03170 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03171 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03172 PF00701 Dihydrodipicolinate synthetase family IE4872_CH03173 PF00005 ABC transporter IE4872_CH03173 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH03174 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH03174 PF00005 ABC transporter IE4872_CH03175 PF00701 Dihydrodipicolinate synthetase family IE4872_CH03176 PF00107 Zinc-binding dehydrogenase IE4872_CH03176 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH03177 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IE4872_CH03179 PF03480 Bacterial extracellular solute-binding protein, family 7 IE4872_CH03180 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH03180 PF07729 FCD domain IE4872_CH03181 PF02615 Malate/L-lactate dehydrogenase IE4872_CH03182 PF01638 HxlR-like helix-turn-helix IE4872_CH03183 PF07690 Major Facilitator Superfamily IE4872_CH03186 PF13191 AAA ATPase domain IE4872_CH03186 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH03190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH03192 PF03480 Bacterial extracellular solute-binding protein, family 7 IE4872_CH03194 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IE4872_CH03195 PF07729 FCD domain IE4872_CH03195 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH03196 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03197 PF00664 ABC transporter transmembrane region IE4872_CH03197 PF00005 ABC transporter IE4872_CH03201 PF01757 Acyltransferase family IE4872_CH03210 PF01757 Acyltransferase family IE4872_CH03213 PF01757 Acyltransferase family IE4872_CH03216 PF05159 Capsule polysaccharide biosynthesis protein IE4872_CH03217 PF00884 Sulfatase IE4872_CH03219 PF00155 Aminotransferase class I and II IE4872_CH03220 PF16197 Ketoacyl-synthetase C-terminal extension IE4872_CH03220 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_CH03220 PF00698 Acyl transferase domain IE4872_CH03220 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_CH03220 PF08659 KR domain IE4872_CH03220 PF00550 Phosphopantetheine attachment site IE4872_CH03220 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_CH03220 PF14765 Polyketide synthase dehydratase IE4872_CH03221 PF02563 Polysaccharide biosynthesis/export protein IE4872_CH03223 PF00132 Bacterial transferase hexapeptide (six repeats) IE4872_CH03226 PF05159 Capsule polysaccharide biosynthesis protein IE4872_CH03230 PF00005 ABC transporter IE4872_CH03231 PF01061 ABC-2 type transporter IE4872_CH03234 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IE4872_CH03234 PF08548 Peptidase M10 serralysin C terminal IE4872_CH03235 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH03235 PF03472 Autoinducer binding domain IE4872_CH03236 PF03466 LysR substrate binding domain IE4872_CH03236 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03239 PF13416 Bacterial extracellular solute-binding protein IE4872_CH03240 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03241 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03242 PF00005 ABC transporter IE4872_CH03242 PF08402 TOBE domain IE4872_CH03243 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IE4872_CH03245 PF00795 Carbon-nitrogen hydrolase IE4872_CH03250 PF00689 Cation transporting ATPase, C-terminus IE4872_CH03250 PF00690 Cation transporter/ATPase, N-terminus IE4872_CH03253 PF04286 Protein of unknown function (DUF445) IE4872_CH03255 PF00449 Urease alpha-subunit, N-terminal domain IE4872_CH03255 PF01979 Amidohydrolase family IE4872_CH03256 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH03256 PF00072 Response regulator receiver domain IE4872_CH03257 PF00765 Autoinducer synthase IE4872_CH03261 PF17841 BID domain of Bartonella effector protein (Bep) IE4872_CH03261 PF03389 MobA/MobL family IE4872_CH03261 PF01443 Viral (Superfamily 1) RNA helicase IE4872_CH03264 PF02534 Type IV secretory system Conjugative DNA transfer IE4872_CH03266 PF00005 ABC transporter IE4872_CH03267 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03267 PF13191 AAA ATPase domain IE4872_CH03269 PF01850 PIN domain IE4872_CH03273 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system IE4872_CH03277 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03279 PF07311 Dodecin IE4872_CH03286 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_CH03287 PF01799 [2Fe-2S] binding domain IE4872_CH03287 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_CH03289 PF17762 HTH domain found in ParB protein IE4872_CH03289 PF02195 ParB-like nuclease domain IE4872_CH03290 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IE4872_CH03294 PF00437 Type II/IV secretion system protein IE4872_CH03295 PF03743 Bacterial conjugation TrbI-like protein IE4872_CH03296 PF03524 Conjugal transfer protein IE4872_CH03297 PF04335 VirB8 protein IE4872_CH03299 PF04610 TrbL/VirB6 plasmid conjugal transfer protein IE4872_CH03302 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IE4872_CH03303 PF05101 Type IV secretory pathway, VirB3-like protein IE4872_CH03304 PF04956 TrbC/VIRB2 family IE4872_CH03305 PF01464 Transglycosylase SLT domain IE4872_CH03308 PF12833 Helix-turn-helix domain IE4872_CH03309 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_CH03309 PF01799 [2Fe-2S] binding domain IE4872_CH03310 PF03450 CO dehydrogenase flavoprotein C-terminal domain IE4872_CH03310 PF00941 FAD binding domain in molybdopterin dehydrogenase IE4872_CH03311 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_CH03311 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IE4872_CH03314 PF12849 PBP superfamily domain IE4872_CH03315 PF02690 Na+/Pi-cotransporter IE4872_CH03318 PF00293 NUDIX domain IE4872_CH03319 PF01928 CYTH domain IE4872_CH03328 PF01547 Bacterial extracellular solute-binding protein IE4872_CH03329 PF00005 ABC transporter IE4872_CH03329 PF17912 MalK OB fold domain IE4872_CH03330 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03331 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03333 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH03333 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH03334 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03335 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03336 PF01547 Bacterial extracellular solute-binding protein IE4872_CH03337 PF08402 TOBE domain IE4872_CH03337 PF00005 ABC transporter IE4872_CH03346 PF02673 Bacitracin resistance protein BacA IE4872_CH03347 PF01569 PAP2 superfamily IE4872_CH03349 PF13657 HipA N-terminal domain IE4872_CH03349 PF07804 HipA-like C-terminal domain IE4872_CH03353 PF00005 ABC transporter IE4872_CH03353 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH03354 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03354 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_CH03355 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03356 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_CH03359 PF03466 LysR substrate binding domain IE4872_CH03359 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03360 PF01053 Cys/Met metabolism PLP-dependent enzyme IE4872_CH03361 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_CH03362 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03363 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03364 PF00005 ABC transporter IE4872_CH03366 PF01850 PIN domain IE4872_CH03369 PF00873 AcrB/AcrD/AcrF family IE4872_CH03370 PF04191 Phospholipid methyltransferase IE4872_CH03371 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH03371 PF00072 Response regulator receiver domain IE4872_CH03373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH03373 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH03373 PF00672 HAMP domain IE4872_CH03374 PF00873 AcrB/AcrD/AcrF family IE4872_CH03377 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH03377 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH03377 PF00672 HAMP domain IE4872_CH03378 PF00072 Response regulator receiver domain IE4872_CH03378 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH03382 PF03328 HpcH/HpaI aldolase/citrate lyase family IE4872_CH03383 PF01557 Fumarylacetoacetate (FAA) hydrolase family IE4872_CH03384 PF04444 Catechol dioxygenase N terminus IE4872_CH03384 PF00775 Dioxygenase IE4872_CH03385 PF07729 FCD domain IE4872_CH03385 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH03387 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03388 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03389 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_CH03390 PF00005 ABC transporter IE4872_CH03391 PF08501 Shikimate dehydrogenase substrate binding domain IE4872_CH03391 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IE4872_CH03393 PF01220 Dehydroquinase class II IE4872_CH03394 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH03394 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH03395 PF00465 Iron-containing alcohol dehydrogenase IE4872_CH03402 PF07715 TonB-dependent Receptor Plug Domain IE4872_CH03402 PF00593 TonB dependent receptor IE4872_CH03403 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH03405 PF13737 Transposase DDE domain IE4872_CH03410 PF13439 Glycosyltransferase Family 4 IE4872_CH03410 PF00534 Glycosyl transferases group 1 IE4872_CH03413 PF12802 MarR family IE4872_CH03414 PF00664 ABC transporter transmembrane region IE4872_CH03414 PF00005 ABC transporter IE4872_CH03415 PF00529 HlyD membrane-fusion protein of T1SS IE4872_CH03417 PF00534 Glycosyl transferases group 1 IE4872_CH03417 PF00535 Glycosyl transferase family 2 IE4872_CH03418 PF08241 Methyltransferase domain IE4872_CH03419 PF00862 Sucrose synthase IE4872_CH03419 PF00534 Glycosyl transferases group 1 IE4872_CH03433 PF00849 RNA pseudouridylate synthase IE4872_CH03433 PF01479 S4 domain IE4872_CH03434 PF00156 Phosphoribosyl transferase domain IE4872_CH03435 PF03600 Citrate transporter IE4872_CH03435 PF02080 TrkA-C domain IE4872_CH03436 PF01259 SAICAR synthetase IE4872_CH03437 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH03438 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IE4872_CH03438 PF00529 HlyD membrane-fusion protein of T1SS IE4872_CH03439 PF00873 AcrB/AcrD/AcrF family IE4872_CH03440 PF02321 Outer membrane efflux protein IE4872_CH03441 PF00356 Bacterial regulatory proteins, lacI family IE4872_CH03443 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03444 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03445 PF08402 TOBE domain IE4872_CH03445 PF00005 ABC transporter IE4872_CH03447 PF01979 Amidohydrolase family IE4872_CH03447 PF13382 Adenine deaminase C-terminal domain IE4872_CH03448 PF07687 Peptidase dimerisation domain IE4872_CH03448 PF01546 Peptidase family M20/M25/M40 IE4872_CH03449 PF01970 Tripartite tricarboxylate transporter TctA family IE4872_CH03451 PF03401 Tripartite tricarboxylate transporter family receptor IE4872_CH03452 PF00158 Sigma-54 interaction domain IE4872_CH03452 PF00072 Response regulator receiver domain IE4872_CH03452 PF02954 Bacterial regulatory protein, Fis family IE4872_CH03453 PF02743 Cache domain IE4872_CH03453 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH03453 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH03454 PF00174 Oxidoreductase molybdopterin binding domain IE4872_CH03458 PF00300 Histidine phosphatase superfamily (branch 1) IE4872_CH03471 PF00924 Mechanosensitive ion channel IE4872_CH03473 PF00156 Phosphoribosyl transferase domain IE4872_CH03473 PF05139 Erythromycin esterase IE4872_CH03474 PF05139 Erythromycin esterase IE4872_CH03474 PF00156 Phosphoribosyl transferase domain IE4872_CH03475 PF13411 MerR HTH family regulatory protein IE4872_CH03476 PF00403 Heavy-metal-associated domain IE4872_CH03478 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_CH03478 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IE4872_CH03478 PF01842 ACT domain IE4872_CH03480 PF13505 Outer membrane protein beta-barrel domain IE4872_CH03482 PF00510 Cytochrome c oxidase subunit III IE4872_CH03483 PF00510 Cytochrome c oxidase subunit III IE4872_CH03484 PF00115 Cytochrome C and Quinol oxidase polypeptide I IE4872_CH03485 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IE4872_CH03486 PF00034 Cytochrome c IE4872_CH03487 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IE4872_CH03487 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IE4872_CH03487 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IE4872_CH03487 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IE4872_CH03488 PF17862 AAA+ lid domain IE4872_CH03488 PF01434 Peptidase family M41 IE4872_CH03488 PF00004 ATPase family associated with various cellular activities (AAA) IE4872_CH03488 PF06480 FtsH Extracellular IE4872_CH03489 PF01171 PP-loop family IE4872_CH03491 PF00691 OmpA family IE4872_CH03492 PF04052 TolB amino-terminal domain IE4872_CH03492 PF07676 WD40-like Beta Propeller Repeat IE4872_CH03494 PF02472 Biopolymer transport protein ExbD/TolR IE4872_CH03495 PF01618 MotA/TolQ/ExbB proton channel family IE4872_CH03496 PF03061 Thioesterase superfamily IE4872_CH03501 PF13277 YmdB-like protein IE4872_CH03504 PF01709 Transcriptional regulator IE4872_CH03505 PF00296 Luciferase-like monooxygenase IE4872_CH03506 PF00672 HAMP domain IE4872_CH03506 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_CH03507 PF02075 Crossover junction endodeoxyribonuclease RuvC IE4872_CH03510 PF07499 RuvA, C-terminal domain IE4872_CH03510 PF01330 RuvA N terminal domain IE4872_CH03511 PF17864 RuvB AAA lid domain IE4872_CH03511 PF05491 RuvB C-terminal winged helix domain IE4872_CH03511 PF05496 Holliday junction DNA helicase RuvB P-loop domain IE4872_CH03512 PF00149 Calcineurin-like phosphoesterase IE4872_CH03513 PF05163 DinB family IE4872_CH03515 PF09924 Uncharacterised conserved protein (DUF2156) IE4872_CH03515 PF03706 Lysylphosphatidylglycerol synthase TM region IE4872_CH03516 PF00924 Mechanosensitive ion channel IE4872_CH03517 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IE4872_CH03517 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_CH03520 PF07690 Major Facilitator Superfamily IE4872_CH03521 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03521 PF03466 LysR substrate binding domain IE4872_CH03525 PF00456 Transketolase, thiamine diphosphate binding domain IE4872_CH03525 PF02780 Transketolase, C-terminal domain IE4872_CH03525 PF02779 Transketolase, pyrimidine binding domain IE4872_CH03526 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IE4872_CH03526 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IE4872_CH03528 PF00999 Sodium/hydrogen exchanger family IE4872_CH03528 PF03471 Transporter associated domain IE4872_CH03528 PF02080 TrkA-C domain IE4872_CH03529 PF00162 Phosphoglycerate kinase IE4872_CH03530 PF00274 Fructose-bisphosphate aldolase class-I IE4872_CH03531 PF02567 Phenazine biosynthesis-like protein IE4872_CH03536 PF01197 Ribosomal protein L31 IE4872_CH03537 PF00005 ABC transporter IE4872_CH03537 PF00664 ABC transporter transmembrane region IE4872_CH03538 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03539 PF03401 Tripartite tricarboxylate transporter family receptor IE4872_CH03540 PF07411 Domain of unknown function (DUF1508) IE4872_CH03541 PF00890 FAD binding domain IE4872_CH03542 PF00691 OmpA family IE4872_CH03542 PF01389 OmpA-like transmembrane domain IE4872_CH03544 PF00459 Inositol monophosphatase family IE4872_CH03548 PF01022 Bacterial regulatory protein, arsR family IE4872_CH03551 PF00731 AIR carboxylase IE4872_CH03552 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IE4872_CH03552 PF02222 ATP-grasp domain IE4872_CH03553 PF00444 Ribosomal protein L36 IE4872_CH03555 PF00561 alpha/beta hydrolase fold IE4872_CH03558 PF12833 Helix-turn-helix domain IE4872_CH03559 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_CH03560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03560 PF03466 LysR substrate binding domain IE4872_CH03561 PF14552 Tautomerase enzyme IE4872_CH03563 PF01810 LysE type translocator IE4872_CH03564 PF02887 Pyruvate kinase, alpha/beta domain IE4872_CH03564 PF00224 Pyruvate kinase, barrel domain IE4872_CH03568 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) IE4872_CH03570 PF00561 alpha/beta hydrolase fold IE4872_CH03571 PF05951 Bacterial protein of unknown function (DUF882) IE4872_CH03572 PF02954 Bacterial regulatory protein, Fis family IE4872_CH03572 PF00072 Response regulator receiver domain IE4872_CH03572 PF00158 Sigma-54 interaction domain IE4872_CH03574 PF00425 chorismate binding enzyme IE4872_CH03574 PF04715 Anthranilate synthase component I, N terminal region IE4872_CH03577 PF03435 Saccharopine dehydrogenase NADP binding domain IE4872_CH03577 PF16653 Saccharopine dehydrogenase C-terminal domain IE4872_CH03579 PF00149 Calcineurin-like phosphoesterase IE4872_CH03579 PF02872 5'-nucleotidase, C-terminal domain IE4872_CH03580 PF00762 Ferrochelatase IE4872_CH03581 PF01145 SPFH domain / Band 7 family IE4872_CH03581 PF16200 C-terminal region of band_7 IE4872_CH03583 PF00571 CBS domain IE4872_CH03583 PF01380 SIS domain IE4872_CH03585 PF00483 Nucleotidyl transferase IE4872_CH03586 PF13406 Transglycosylase SLT domain IE4872_CH03589 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IE4872_CH03589 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH03591 PF00310 Glutamine amidotransferases class-II IE4872_CH03591 PF04898 Glutamate synthase central domain IE4872_CH03591 PF01645 Conserved region in glutamate synthase IE4872_CH03591 PF01493 GXGXG motif IE4872_CH03593 PF01212 Beta-eliminating lyase IE4872_CH03594 PF07886 BA14K-like protein IE4872_CH03595 PF03466 LysR substrate binding domain IE4872_CH03595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03596 PF13593 SBF-like CPA transporter family (DUF4137) IE4872_CH03597 PF00011 Hsp20/alpha crystallin family IE4872_CH03599 PF00459 Inositol monophosphatase family IE4872_CH03601 PF00072 Response regulator receiver domain IE4872_CH03607 PF02308 MgtC family IE4872_CH03612 PF01970 Tripartite tricarboxylate transporter TctA family IE4872_CH03614 PF03401 Tripartite tricarboxylate transporter family receptor IE4872_CH03616 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03617 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH03617 PF00072 Response regulator receiver domain IE4872_CH03618 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH03618 PF08521 Two-component sensor kinase N-terminal IE4872_CH03618 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH03620 PF04168 A predicted alpha-helical domain with a conserved ER motif. IE4872_CH03620 PF14403 Circularly permuted ATP-grasp type 2 IE4872_CH03621 PF01841 Transglutaminase-like superfamily IE4872_CH03621 PF08379 Bacterial transglutaminase-like N-terminal region IE4872_CH03623 PF00343 Carbohydrate phosphorylase IE4872_CH03624 PF00128 Alpha amylase, catalytic domain IE4872_CH03624 PF02806 Alpha amylase, C-terminal all-beta domain IE4872_CH03624 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IE4872_CH03625 PF00483 Nucleotidyl transferase IE4872_CH03626 PF08323 Starch synthase catalytic domain IE4872_CH03626 PF00534 Glycosyl transferases group 1 IE4872_CH03627 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IE4872_CH03627 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IE4872_CH03627 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IE4872_CH03627 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IE4872_CH03628 PF18390 Glycogen debranching enzyme C-terminal domain IE4872_CH03628 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IE4872_CH03628 PF00128 Alpha amylase, catalytic domain IE4872_CH03629 PF01575 MaoC like domain IE4872_CH03631 PF04268 Sarcosine oxidase, gamma subunit family IE4872_CH03632 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH03632 PF01571 Aminomethyltransferase folate-binding domain IE4872_CH03632 PF08669 Glycine cleavage T-protein C-terminal barrel domain IE4872_CH03632 PF17806 Sarcosine oxidase A3 domain IE4872_CH03634 PF01266 FAD dependent oxidoreductase IE4872_CH03636 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03636 PF00072 Response regulator receiver domain IE4872_CH03638 PF01165 Ribosomal protein S21 IE4872_CH03640 PF00313 'Cold-shock' DNA-binding domain IE4872_CH03641 PF01165 Ribosomal protein S21 IE4872_CH03643 PF01266 FAD dependent oxidoreductase IE4872_CH03643 PF01571 Aminomethyltransferase folate-binding domain IE4872_CH03643 PF16350 FAD dependent oxidoreductase central domain IE4872_CH03643 PF08669 Glycine cleavage T-protein C-terminal barrel domain IE4872_CH03644 PF13426 PAS domain IE4872_CH03644 PF07536 HWE histidine kinase IE4872_CH03644 PF08447 PAS fold IE4872_CH03645 PF02371 Transposase IS116/IS110/IS902 family IE4872_CH03645 PF01548 Transposase IE4872_CH03647 PF02233 NAD(P) transhydrogenase beta subunit IE4872_CH03648 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IE4872_CH03649 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IE4872_CH03649 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IE4872_CH03652 PF00563 EAL domain IE4872_CH03652 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH03652 PF08447 PAS fold IE4872_CH03652 PF08448 PAS fold IE4872_CH03654 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IE4872_CH03655 PF03480 Bacterial extracellular solute-binding protein, family 7 IE4872_CH03656 PF07722 Peptidase C26 IE4872_CH03658 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_CH03658 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IE4872_CH03659 PF00356 Bacterial regulatory proteins, lacI family IE4872_CH03660 PF01047 MarR family IE4872_CH03661 PF02633 Creatinine amidohydrolase IE4872_CH03662 PF07683 Cobalamin synthesis protein cobW C-terminal domain IE4872_CH03662 PF02492 CobW/HypB/UreG, nucleotide-binding domain IE4872_CH03666 PF00583 Acetyltransferase (GNAT) family IE4872_CH03666 PF13673 Acetyltransferase (GNAT) domain IE4872_CH03667 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IE4872_CH03667 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IE4872_CH03669 PF03466 LysR substrate binding domain IE4872_CH03669 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03675 PF01081 KDPG and KHG aldolase IE4872_CH03679 PF00563 EAL domain IE4872_CH03679 PF03707 Bacterial signalling protein N terminal repeat IE4872_CH03679 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH03679 PF13188 PAS domain IE4872_CH03680 PF03180 NLPA lipoprotein IE4872_CH03681 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03682 PF09383 NIL domain IE4872_CH03682 PF00005 ABC transporter IE4872_CH03683 PF00232 Glycosyl hydrolase family 1 IE4872_CH03684 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH03684 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH03686 PF13407 Periplasmic binding protein domain IE4872_CH03687 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH03688 PF00005 ABC transporter IE4872_CH03689 PF00356 Bacterial regulatory proteins, lacI family IE4872_CH03690 PF01261 Xylose isomerase-like TIM barrel IE4872_CH03691 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IE4872_CH03691 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IE4872_CH03692 PF00356 Bacterial regulatory proteins, lacI family IE4872_CH03693 PF07690 Major Facilitator Superfamily IE4872_CH03694 PF13533 Biotin-lipoyl like IE4872_CH03695 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH03696 PF12833 Helix-turn-helix domain IE4872_CH03697 PF03741 Integral membrane protein TerC family IE4872_CH03697 PF03471 Transporter associated domain IE4872_CH03699 PF02080 TrkA-C domain IE4872_CH03699 PF03600 Citrate transporter IE4872_CH03701 PF00749 tRNA synthetases class I (E and Q), catalytic domain IE4872_CH03702 PF01336 OB-fold nucleic acid binding domain IE4872_CH03702 PF00152 tRNA synthetases class II (D, K and N) IE4872_CH03704 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03704 PF03466 LysR substrate binding domain IE4872_CH03705 PF13416 Bacterial extracellular solute-binding protein IE4872_CH03706 PF08402 TOBE domain IE4872_CH03706 PF00005 ABC transporter IE4872_CH03707 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03708 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03709 PF00171 Aldehyde dehydrogenase family IE4872_CH03712 PF00923 Transaldolase/Fructose-6-phosphate aldolase IE4872_CH03714 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IE4872_CH03714 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IE4872_CH03716 PF10576 Iron-sulfur binding domain of endonuclease III IE4872_CH03716 PF00633 Helix-hairpin-helix motif IE4872_CH03716 PF00730 HhH-GPD superfamily base excision DNA repair protein IE4872_CH03719 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IE4872_CH03719 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IE4872_CH03720 PF13419 Haloacid dehalogenase-like hydrolase IE4872_CH03721 PF01232 Mannitol dehydrogenase Rossmann domain IE4872_CH03721 PF08125 Mannitol dehydrogenase C-terminal domain IE4872_CH03722 PF00005 ABC transporter IE4872_CH03722 PF08402 TOBE domain IE4872_CH03723 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03724 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03726 PF04198 Putative sugar-binding domain IE4872_CH03728 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH03728 PF00072 Response regulator receiver domain IE4872_CH03729 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH03729 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH03730 PF00480 ROK family IE4872_CH03731 PF00873 AcrB/AcrD/AcrF family IE4872_CH03734 PF02566 OsmC-like protein IE4872_CH03735 PF07729 FCD domain IE4872_CH03735 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH03736 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IE4872_CH03736 PF13378 Enolase C-terminal domain-like IE4872_CH03739 PF02743 Cache domain IE4872_CH03739 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_CH03739 PF00672 HAMP domain IE4872_CH03744 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IE4872_CH03744 PF00703 Glycosyl hydrolases family 2 IE4872_CH03744 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 IE4872_CH03745 PF17912 MalK OB fold domain IE4872_CH03745 PF00005 ABC transporter IE4872_CH03746 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03748 PF01547 Bacterial extracellular solute-binding protein IE4872_CH03750 PF03706 Lysylphosphatidylglycerol synthase TM region IE4872_CH03755 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03756 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03757 PF17912 MalK OB fold domain IE4872_CH03757 PF00005 ABC transporter IE4872_CH03758 PF00005 ABC transporter IE4872_CH03758 PF17912 MalK OB fold domain IE4872_CH03759 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IE4872_CH03759 PF01266 FAD dependent oxidoreductase IE4872_CH03760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_CH03760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_CH03761 PF00005 ABC transporter IE4872_CH03761 PF17912 MalK OB fold domain IE4872_CH03762 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03763 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH03766 PF13493 Domain of unknown function (DUF4118) IE4872_CH03766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_CH03766 PF13426 PAS domain IE4872_CH03766 PF08447 PAS fold IE4872_CH03766 PF00989 PAS fold IE4872_CH03766 PF00512 His Kinase A (phospho-acceptor) domain IE4872_CH03767 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH03767 PF00072 Response regulator receiver domain IE4872_CH03769 PF00072 Response regulator receiver domain IE4872_CH03769 PF00196 Bacterial regulatory proteins, luxR family IE4872_CH03772 PF07005 Sugar-binding N-terminal domain IE4872_CH03772 PF17042 Nucleotide-binding C-terminal domain IE4872_CH03773 PF01261 Xylose isomerase-like TIM barrel IE4872_CH03774 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_CH03774 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IE4872_CH03775 PF07690 Major Facilitator Superfamily IE4872_CH03776 PF00356 Bacterial regulatory proteins, lacI family IE4872_CH03783 PF01551 Peptidase family M23 IE4872_CH03783 PF08460 Bacterial SH3 domain IE4872_CH03784 PF10431 C-terminal, D2-small domain, of ClpB protein IE4872_CH03784 PF02861 Clp amino terminal domain, pathogenicity island component IE4872_CH03784 PF00004 ATPase family associated with various cellular activities (AAA) IE4872_CH03784 PF07724 AAA domain (Cdc48 subfamily) IE4872_CH03784 PF17871 AAA lid domain IE4872_CH03785 PF01810 LysE type translocator IE4872_CH03787 PF17827 PrmC N-terminal domain IE4872_CH03787 PF05175 Methyltransferase small domain IE4872_CH03788 PF00472 RF-1 domain IE4872_CH03788 PF03462 PCRF domain IE4872_CH03789 PF01590 GAF domain IE4872_CH03789 PF05524 PEP-utilising enzyme, N-terminal IE4872_CH03789 PF02896 PEP-utilising enzyme, TIM barrel domain IE4872_CH03789 PF00391 PEP-utilising enzyme, mobile domain IE4872_CH03790 PF13840 ACT domain IE4872_CH03790 PF01842 ACT domain IE4872_CH03790 PF00696 Amino acid kinase family IE4872_CH03792 PF04239 Protein of unknown function (DUF421) IE4872_CH03795 PF01425 Amidase IE4872_CH03798 PF00795 Carbon-nitrogen hydrolase IE4872_CH03799 PF00462 Glutaredoxin IE4872_CH03801 PF08241 Methyltransferase domain IE4872_CH03804 PF00293 NUDIX domain IE4872_CH03805 PF00583 Acetyltransferase (GNAT) family IE4872_CH03806 PF01960 ArgJ family IE4872_CH03808 PF02810 SEC-C motif IE4872_CH03808 PF07516 SecA Wing and Scaffold domain IE4872_CH03808 PF01043 SecA preprotein cross-linking domain IE4872_CH03808 PF07517 SecA DEAD-like domain IE4872_CH03811 PF00501 AMP-binding enzyme IE4872_CH03811 PF13193 AMP-binding enzyme C-terminal domain IE4872_CH03812 PF00248 Aldo/keto reductase family IE4872_CH03821 PF00999 Sodium/hydrogen exchanger family IE4872_CH03821 PF02254 TrkA-N domain IE4872_CH03827 PF00749 tRNA synthetases class I (E and Q), catalytic domain IE4872_CH03829 PF00106 short chain dehydrogenase IE4872_CH03831 PF01923 Cobalamin adenosyltransferase IE4872_CH03833 PF01012 Electron transfer flavoprotein domain IE4872_CH03834 PF00766 Electron transfer flavoprotein FAD-binding domain IE4872_CH03834 PF01012 Electron transfer flavoprotein domain IE4872_CH03835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IE4872_CH03835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IE4872_CH03836 PF08534 Redoxin IE4872_CH03837 PF00206 Lyase IE4872_CH03837 PF14698 Argininosuccinate lyase C-terminal IE4872_CH03839 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IE4872_CH03839 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IE4872_CH03841 PF00072 Response regulator receiver domain IE4872_CH03842 PF00156 Phosphoribosyl transferase domain IE4872_CH03844 PF00005 ABC transporter IE4872_CH03848 PF04752 ChaC-like protein IE4872_CH03850 PF02153 Prephenate dehydrogenase IE4872_CH03851 PF00155 Aminotransferase class I and II IE4872_CH03852 PF01209 ubiE/COQ5 methyltransferase family IE4872_CH03853 PF16123 Hydroxyacylglutathione hydrolase C-terminus IE4872_CH03853 PF00753 Metallo-beta-lactamase superfamily IE4872_CH03857 PF00830 Ribosomal L28 family IE4872_CH03860 PF06213 Cobalamin biosynthesis protein CobT IE4872_CH03860 PF11775 Cobalamin biosynthesis protein CobT VWA domain IE4872_CH03861 PF07728 AAA domain (dynein-related subfamily) IE4872_CH03861 PF12556 Cobaltochelatase CobS subunit N terminal IE4872_CH03861 PF08406 CbbQ/NirQ/NorQ C-terminal IE4872_CH03862 PF00226 DnaJ domain IE4872_CH03863 PF01722 BolA-like protein IE4872_CH03865 PF03471 Transporter associated domain IE4872_CH03865 PF00571 CBS domain IE4872_CH03865 PF01595 Cyclin M transmembrane N-terminal domain IE4872_CH03866 PF01761 3-dehydroquinate synthase IE4872_CH03867 PF01202 Shikimate kinase IE4872_CH03869 PF00589 Phage integrase family IE4872_CH03869 PF02899 Phage integrase, N-terminal SAM-like domain IE4872_CH03870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IE4872_CH03871 PF03734 L,D-transpeptidase catalytic domain IE4872_CH03872 PF01206 Sulfurtransferase TusA IE4872_CH03873 PF02492 CobW/HypB/UreG, nucleotide-binding domain IE4872_CH03873 PF07683 Cobalamin synthesis protein cobW C-terminal domain IE4872_CH03874 PF07943 Penicillin-binding protein 5, C-terminal domain IE4872_CH03874 PF00768 D-alanyl-D-alanine carboxypeptidase IE4872_CH03877 PF04293 SpoVR like protein IE4872_CH03878 PF04285 Protein of unknown function (DUF444) IE4872_CH03879 PF08298 PrkA AAA domain IE4872_CH03879 PF06798 PrkA serine protein kinase C-terminal domain IE4872_CH03884 PF13288 DXP reductoisomerase C-terminal domain IE4872_CH03884 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IE4872_CH03884 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IE4872_CH03885 PF00155 Aminotransferase class I and II IE4872_CH03886 PF00941 FAD binding domain in molybdopterin dehydrogenase IE4872_CH03886 PF03450 CO dehydrogenase flavoprotein C-terminal domain IE4872_CH03887 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IE4872_CH03887 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_CH03888 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_CH03888 PF01799 [2Fe-2S] binding domain IE4872_CH03890 PF17243 POTRA domain TamA domain 1 IE4872_CH03890 PF07244 Surface antigen variable number repeat IE4872_CH03890 PF01103 Surface antigen IE4872_CH03893 PF00491 Arginase family IE4872_CH03894 PF00202 Aminotransferase class-III IE4872_CH03895 PF01584 CheW-like domain IE4872_CH03896 PF07690 Major Facilitator Superfamily IE4872_CH03898 PF02634 FdhD/NarQ family IE4872_CH03899 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IE4872_CH03899 PF00037 4Fe-4S binding domain IE4872_CH03899 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IE4872_CH03899 PF01568 Molydopterin dinucleotide binding domain IE4872_CH03899 PF00384 Molybdopterin oxidoreductase IE4872_CH03900 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IE4872_CH03900 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IE4872_CH03900 PF00037 4Fe-4S binding domain IE4872_CH03902 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH03902 PF03466 LysR substrate binding domain IE4872_CH03903 PF01022 Bacterial regulatory protein, arsR family IE4872_CH03905 PF08220 DeoR-like helix-turn-helix domain IE4872_CH03905 PF00455 DeoR C terminal sensor domain IE4872_CH03906 PF00440 Bacterial regulatory proteins, tetR family IE4872_CH03908 PF00376 MerR family regulatory protein IE4872_CH03908 PF09278 MerR, DNA binding IE4872_CH03911 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IE4872_CH03913 PF02874 ATP synthase alpha/beta family, beta-barrel domain IE4872_CH03913 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IE4872_CH03914 PF00231 ATP synthase IE4872_CH03915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IE4872_CH03915 PF02874 ATP synthase alpha/beta family, beta-barrel domain IE4872_CH03915 PF00306 ATP synthase alpha/beta chain, C terminal domain IE4872_CH03916 PF00213 ATP synthase delta (OSCP) subunit IE4872_CH03918 PF17764 3′ DNA-binding domain (3′BD) IE4872_CH03918 PF00270 DEAD/DEAH box helicase IE4872_CH03918 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IE4872_CH03918 PF18074 Primosomal protein N C-terminal domain IE4872_CH03921 PF00589 Phage integrase family IE4872_CH03921 PF02899 Phage integrase, N-terminal SAM-like domain IE4872_CH03923 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_CH03923 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IE4872_CH03926 PF02817 e3 binding domain IE4872_CH03926 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IE4872_CH03926 PF00364 Biotin-requiring enzyme IE4872_CH03928 PF00676 Dehydrogenase E1 component IE4872_CH03928 PF16078 2-oxoglutarate dehydrogenase N-terminus IE4872_CH03928 PF16870 2-oxoglutarate dehydrogenase C-terminal IE4872_CH03928 PF02779 Transketolase, pyrimidine binding domain IE4872_CH03929 PF00549 CoA-ligase IE4872_CH03929 PF02629 CoA binding domain IE4872_CH03930 PF08442 ATP-grasp domain IE4872_CH03930 PF00549 CoA-ligase IE4872_CH03931 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IE4872_CH03931 PF00056 lactate/malate dehydrogenase, NAD binding domain IE4872_CH03932 PF03969 AFG1-like ATPase IE4872_CH03933 PF02974 Protease inhibitor Inh IE4872_CH03934 PF13237 4Fe-4S dicluster domain IE4872_CH03934 PF13085 2Fe-2S iron-sulfur cluster binding domain IE4872_CH03936 PF00890 FAD binding domain IE4872_CH03936 PF02910 Fumarate reductase flavoprotein C-term IE4872_CH03938 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IE4872_CH03943 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IE4872_CH03943 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IE4872_CH03944 PF00814 Glycoprotease family IE4872_CH03945 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IE4872_CH03945 PF03900 Porphobilinogen deaminase, C-terminal domain IE4872_CH03950 PF00117 Glutamine amidotransferase class-I IE4872_CH03951 PF02325 YGGT family IE4872_CH03952 PF02594 Uncharacterised ACR, YggU family COG1872 IE4872_CH03953 PF00719 Inorganic pyrophosphatase IE4872_CH03957 PF01432 Peptidase family M3 IE4872_CH03960 PF00764 Arginosuccinate synthase IE4872_CH03961 PF00106 short chain dehydrogenase IE4872_CH03962 PF01810 LysE type translocator IE4872_CH03963 PF00005 ABC transporter IE4872_CH03964 PF02653 Branched-chain amino acid transport system / permease component IE4872_CH03966 PF04055 Radical SAM superfamily IE4872_CH03970 PF01329 Pterin 4 alpha carbinolamine dehydratase IE4872_CH03971 PF02834 LigT like Phosphoesterase IE4872_CH03972 PF13472 GDSL-like Lipase/Acylhydrolase family IE4872_CH03973 PF00005 ABC transporter IE4872_CH03975 PF01027 Inhibitor of apoptosis-promoting Bax1 IE4872_CH03979 PF00330 Aconitase family (aconitate hydratase) IE4872_CH03979 PF00694 Aconitase C-terminal domain IE4872_CH03981 PF00005 ABC transporter IE4872_CH03982 PF03379 CcmB protein IE4872_CH03983 PF01578 Cytochrome C assembly protein IE4872_CH03984 PF04995 Heme exporter protein D (CcmD) IE4872_CH03985 PF08534 Redoxin IE4872_CH03986 PF10755 Protein of unknown function (DUF2585) IE4872_CH03987 PF04279 Intracellular septation protein A IE4872_CH03988 PF00448 SRP54-type protein, GTPase domain IE4872_CH03988 PF02881 SRP54-type protein, helical bundle domain IE4872_CH03989 PF04055 Radical SAM superfamily IE4872_CH03989 PF00919 Uncharacterized protein family UPF0004 IE4872_CH03990 PF01678 Diaminopimelate epimerase IE4872_CH03991 PF14492 Elongation Factor G, domain II IE4872_CH03991 PF03764 Elongation factor G, domain IV IE4872_CH03991 PF00009 Elongation factor Tu GTP binding domain IE4872_CH03991 PF00679 Elongation factor G C-terminus IE4872_CH03992 PF00448 SRP54-type protein, GTPase domain IE4872_CH03992 PF02881 SRP54-type protein, helical bundle domain IE4872_CH03992 PF02978 Signal peptide binding domain IE4872_CH03993 PF01817 Chorismate mutase type II IE4872_CH03993 PF02153 Prephenate dehydrogenase IE4872_CH03994 PF00886 Ribosomal protein S16 IE4872_CH03995 PF05239 PRC-barrel domain IE4872_CH03995 PF01782 RimM N-terminal domain IE4872_CH03996 PF01746 tRNA (Guanine-1)-methyltransferase IE4872_CH03997 PF01245 Ribosomal protein L19 IE4872_CH03998 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_CH03999 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH04001 PF00330 Aconitase family (aconitate hydratase) IE4872_CH04002 PF00300 Histidine phosphatase superfamily (branch 1) IE4872_CH04003 PF00248 Aldo/keto reductase family IE4872_CH04005 PF00486 Transcriptional regulatory protein, C terminal IE4872_CH04005 PF00072 Response regulator receiver domain IE4872_CH04007 PF03372 Endonuclease/Exonuclease/phosphatase family IE4872_CH04008 PF03548 Outer membrane lipoprotein carrier protein LolA IE4872_CH04009 PF01580 FtsK/SpoIIIE family IE4872_CH04009 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IE4872_CH04009 PF17854 FtsK alpha domain IE4872_CH04009 PF09397 Ftsk gamma domain IE4872_CH04010 PF00909 Ammonium Transporter Family IE4872_CH04011 PF00543 Nitrogen regulatory protein P-II IE4872_CH04013 PF01494 FAD binding domain IE4872_CH04014 PF03966 Trm112p-like protein IE4872_CH04016 PF00085 Thioredoxin IE4872_CH04022 PF00005 ABC transporter IE4872_CH04023 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH04025 PF02615 Malate/L-lactate dehydrogenase IE4872_CH04026 PF00171 Aldehyde dehydrogenase family IE4872_CH04027 PF01266 FAD dependent oxidoreductase IE4872_CH04028 PF03466 LysR substrate binding domain IE4872_CH04028 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_CH04030 PF13439 Glycosyltransferase Family 4 IE4872_CH04030 PF00534 Glycosyl transferases group 1 IE4872_CH04038 PF00550 Phosphopantetheine attachment site IE4872_CH04039 PF12544 Lysine-2,3-aminomutase IE4872_CH04039 PF04055 Radical SAM superfamily IE4872_CH04040 PF00152 tRNA synthetases class II (D, K and N) IE4872_CH04041 PF09285 Elongation factor P, C-terminal IE4872_CH04041 PF01132 Elongation factor P (EF-P) OB domain IE4872_CH04041 PF08207 Elongation factor P (EF-P) KOW-like domain IE4872_CH04042 PF13580 SIS domain IE4872_CH04043 PF01979 Amidohydrolase family IE4872_CH04044 PF01380 SIS domain IE4872_CH04045 PF07702 UTRA domain IE4872_CH04045 PF00392 Bacterial regulatory proteins, gntR family IE4872_CH04047 PF04204 Homoserine O-succinyltransferase IE4872_CH04048 PF06472 ABC transporter transmembrane region 2 IE4872_CH04048 PF00005 ABC transporter IE4872_CH04051 PF01547 Bacterial extracellular solute-binding protein IE4872_CH04052 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH04053 PF00005 ABC transporter IE4872_CH04054 PF01435 Peptidase family M48 IE4872_CH04055 PF00140 Sigma-70 factor, region 1.2 IE4872_CH04055 PF04542 Sigma-70 region 2 IE4872_CH04055 PF04545 Sigma-70, region 4 IE4872_CH04056 PF02559 CarD-like/TRCF domain IE4872_CH04057 PF11953 Domain of unknown function (DUF3470) IE4872_CH04057 PF00037 4Fe-4S binding domain IE4872_CH04062 PF02803 Thiolase, C-terminal domain IE4872_CH04062 PF00108 Thiolase, N-terminal domain IE4872_CH04063 PF05233 PHB accumulation regulatory domain IE4872_CH04063 PF07879 PHB/PHA accumulation regulator DNA-binding domain IE4872_CH04065 PF01783 Ribosomal L32p protein family IE4872_CH04067 PF00912 Transglycosylase IE4872_CH04068 PF00348 Polyprenyl synthetase IE4872_CH04069 PF04551 GcpE protein IE4872_CH04070 PF07690 Major Facilitator Superfamily IE4872_CH04071 PF00455 DeoR C terminal sensor domain IE4872_CH04071 PF08220 DeoR-like helix-turn-helix domain IE4872_CH04072 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_CH04073 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH04074 PF00005 ABC transporter IE4872_CH04077 PF00364 Biotin-requiring enzyme IE4872_CH04077 PF02785 Biotin carboxylase C-terminal domain IE4872_CH04077 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_CH04077 PF00289 Biotin carboxylase, N-terminal domain IE4872_CH04077 PF02436 Conserved carboxylase domain IE4872_CH04077 PF00682 HMGL-like IE4872_CH04079 PF00005 ABC transporter IE4872_CH04079 PF00664 ABC transporter transmembrane region IE4872_CH04082 PF07690 Major Facilitator Superfamily IE4872_CH04084 PF06165 Glycosyltransferase family 36 IE4872_CH04084 PF10091 Putative glucoamylase IE4872_CH04084 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain IE4872_CH04087 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH04087 PF00005 ABC transporter IE4872_CH04088 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_CH04088 PF00005 ABC transporter IE4872_CH04090 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH04091 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_CH04092 PF01244 Membrane dipeptidase (Peptidase family M19) IE4872_CH04094 PF16347 Domain of unknown function (DUF4976) IE4872_CH04094 PF00884 Sulfatase IE4872_CH04095 PF16363 GDP-mannose 4,6 dehydratase IE4872_CH04100 PF00990 Diguanylate cyclase, GGDEF domain IE4872_CH04100 PF17158 Membrane-associated sensor, integral membrane domain IE4872_CH04102 PF11871 Domain of unknown function (DUF3391) IE4872_CH04102 PF01966 HD domain IE4872_CH04105 PF00829 Ribosomal prokaryotic L21 protein IE4872_CH04106 PF01016 Ribosomal L27 protein IE4872_CH04110 PF01018 GTP1/OBG IE4872_CH04110 PF01926 50S ribosome-binding GTPase IE4872_CH04111 PF01472 PUA domain IE4872_CH04111 PF00696 Amino acid kinase family IE4872_CH04112 PF00171 Aldehyde dehydrogenase family IE4872_CH04113 PF01467 Cytidylyltransferase-like IE4872_CH04114 PF01548 Transposase IE4872_CH04114 PF02371 Transposase IS116/IS110/IS902 family IE4872_CH04120 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_CH04121 PF03459 TOBE domain IE4872_CH04121 PF00005 ABC transporter IE4872_CH04124 PF02590 Predicted SPOUT methyltransferase IE4872_CH04126 PF03572 Peptidase family S41 IE4872_CH04126 PF13180 PDZ domain IE4872_CH04128 PF00293 NUDIX domain IE4872_CH04132 PF00210 Ferritin-like domain IE4872_CH04134 PF01336 OB-fold nucleic acid binding domain IE4872_CH04134 PF02811 PHP domain IE4872_CH04134 PF14579 Helix-hairpin-helix motif IE4872_CH04134 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IE4872_CH04134 PF07733 Bacterial DNA polymerase III alpha NTPase domain IE4872_CH04139 PF03328 HpcH/HpaI aldolase/citrate lyase family IE4872_CH04141 PF00694 Aconitase C-terminal domain IE4872_CH04142 PF00180 Isocitrate/isopropylmalate dehydrogenase IE4872_CH04143 PF01569 PAP2 superfamily IE4872_CH04144 PF00083 Sugar (and other) transporter IE4872_CH04145 PF01118 Semialdehyde dehydrogenase, NAD binding domain IE4872_CH04145 PF02774 Semialdehyde dehydrogenase, dimerisation domain IE4872_CH04147 PF00484 Carbonic anhydrase IE4872_CH04148 PF08543 Phosphomethylpyrimidine kinase IE4872_CH04149 PF05088 Bacterial NAD-glutamate dehydrogenase IE4872_CH04150 PF11700 Vacuole effluxer Atg22 like IE4872_CH04151 PF02142 MGS-like domain IE4872_CH04151 PF01808 AICARFT/IMPCHase bienzyme IE4872_CH04152 PF07940 Heparinase II/III-like protein IE4872_CH04153 PF01189 16S rRNA methyltransferase RsmB/F IE4872_CH04153 PF01029 NusB family IE4872_CH04154 PF01435 Peptidase family M48 IE4872_CH04156 PF00501 AMP-binding enzyme IE4872_CH04156 PF16177 Acetyl-coenzyme A synthetase N-terminus IE4872_CH04156 PF13193 AMP-binding enzyme C-terminal domain IE4872_CH04158 PF00669 Bacterial flagellin N-terminal helical region IE4872_CH04158 PF00700 Bacterial flagellin C-terminal helical region IE4872_CH04159 PF00501 AMP-binding enzyme IE4872_CH04159 PF16177 Acetyl-coenzyme A synthetase N-terminus IE4872_CH04159 PF13193 AMP-binding enzyme C-terminal domain IE4872_CH04160 PF01168 Alanine racemase, N-terminal domain IE4872_CH04161 PF00133 tRNA synthetases class I (I, L, M and V) IE4872_CH04161 PF13603 Leucyl-tRNA synthetase, Domain 2 IE4872_CH04161 PF08264 Anticodon-binding domain of tRNA IE4872_CH04164 PF02195 ParB-like nuclease domain IE4872_CH04164 PF17762 HTH domain found in ParB protein IE4872_CH04165 PF13614 AAA domain IE4872_CH04166 PF02527 rRNA small subunit methyltransferase G IE4872_CH04167 PF13932 GidA associated domain IE4872_CH04167 PF01134 Glucose inhibited division protein A IE4872_CH04168 PF12631 MnmE helical domain IE4872_CH04168 PF10396 GTP-binding protein TrmE N-terminus IE4872_CH04168 PF01926 50S ribosome-binding GTPase IE4872_CH04169 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IE4872_CH04169 PF07497 Rho termination factor, RNA-binding domain IE4872_CH04169 PF07498 Rho termination factor, N-terminal domain IE4872_CH04171 PF01208 Uroporphyrinogen decarboxylase (URO-D) IE4872_PA00003 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_PA00004 PF00589 Phage integrase family IE4872_PA00006 PF04079 Segregation and condensation complex subunit ScpB IE4872_PA00013 PF12419 SNF2 Helicase protein IE4872_PA00013 PF00271 Helicase conserved C-terminal domain IE4872_PA00013 PF00176 SNF2 family N-terminal domain IE4872_PA00015 PF01119 DNA mismatch repair protein, C-terminal domain IE4872_PA00015 PF08676 MutL C terminal dimerisation domain IE4872_PA00017 PF09019 EcoRII C terminal IE4872_PA00017 PF09217 Restriction endonuclease EcoRII, N-terminal IE4872_PA00019 PF00145 C-5 cytosine-specific DNA methylase IE4872_PA00019 PF18284 DNA methylase N-terminal domain IE4872_PA00029 PF18818 Metallopeptidase superfamily domain IE4872_PA00029 PF08401 Domain of unknown function (DUF1738) IE4872_PA00029 PF13362 Toprim domain IE4872_PA00031 PF05284 Protein of unknown function (DUF736) IE4872_PA00032 PF06339 Ectoine synthase IE4872_PA00034 PF00501 AMP-binding enzyme IE4872_PA00034 PF13193 AMP-binding enzyme C-terminal domain IE4872_PA00035 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IE4872_PA00035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IE4872_PA00037 PF07690 Major Facilitator Superfamily IE4872_PA00038 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PA00038 PF03466 LysR substrate binding domain IE4872_PA00045 PF02534 Type IV secretory system Conjugative DNA transfer IE4872_PA00046 PF06412 Conjugal transfer protein TraD IE4872_PA00047 PF07820 TraC-like protein IE4872_PA00048 PF17841 BID domain of Bartonella effector protein (Bep) IE4872_PA00048 PF01443 Viral (Superfamily 1) RNA helicase IE4872_PA00048 PF03389 MobA/MobL family IE4872_PA00049 PF10502 Signal peptidase, peptidase S26 IE4872_PA00050 PF00795 Carbon-nitrogen hydrolase IE4872_PA00051 PF06871 TraH_2 IE4872_PA00052 PF09228 Prokaryotic Transcriptional repressor TraM IE4872_PA00053 PF00196 Bacterial regulatory proteins, luxR family IE4872_PA00053 PF03472 Autoinducer binding domain IE4872_PA00054 PF00766 Electron transfer flavoprotein FAD-binding domain IE4872_PA00054 PF01012 Electron transfer flavoprotein domain IE4872_PA00055 PF01012 Electron transfer flavoprotein domain IE4872_PA00056 PF02515 CoA-transferase family III IE4872_PA00057 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PA00057 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PA00057 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_PA00058 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PA00058 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_PA00058 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PA00060 PF01575 MaoC like domain IE4872_PA00064 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PA00065 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PA00067 PF00005 ABC transporter IE4872_PA00068 PF07729 FCD domain IE4872_PA00068 PF00392 Bacterial regulatory proteins, gntR family IE4872_PA00070 PF00392 Bacterial regulatory proteins, gntR family IE4872_PA00070 PF07729 FCD domain IE4872_PA00071 PF03746 LamB/YcsF family IE4872_PA00072 PF02682 Carboxyltransferase domain, subdomain C and D IE4872_PA00073 PF02785 Biotin carboxylase C-terminal domain IE4872_PA00073 PF00289 Biotin carboxylase, N-terminal domain IE4872_PA00073 PF00364 Biotin-requiring enzyme IE4872_PA00073 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_PA00075 PF02548 Ketopantoate hydroxymethyltransferase IE4872_PA00078 PF00005 ABC transporter IE4872_PA00081 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PA00082 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PA00083 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_PA00087 PF18603 L-amino acid ligase C-terminal domain 2 IE4872_PA00087 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_PA00096 PF13276 HTH-like domain IE4872_PA00096 PF13683 Integrase core domain IE4872_PA00101 PF08659 KR domain IE4872_PA00101 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_PA00101 PF00107 Zinc-binding dehydrogenase IE4872_PA00101 PF14765 Polyketide synthase dehydratase IE4872_PA00101 PF00698 Acyl transferase domain IE4872_PA00101 PF00550 Phosphopantetheine attachment site IE4872_PA00101 PF16197 Ketoacyl-synthetase C-terminal extension IE4872_PA00101 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PA00101 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_PA00102 PF01527 Transposase IE4872_PA00105 PF00392 Bacterial regulatory proteins, gntR family IE4872_PA00105 PF07729 FCD domain IE4872_PA00107 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IE4872_PA00107 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IE4872_PA00108 PF00202 Aminotransferase class-III IE4872_PA00110 PF00155 Aminotransferase class I and II IE4872_PA00111 PF06968 Biotin and Thiamin Synthesis associated domain IE4872_PA00111 PF04055 Radical SAM superfamily IE4872_PA00114 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_PA00114 PF02785 Biotin carboxylase C-terminal domain IE4872_PA00114 PF00289 Biotin carboxylase, N-terminal domain IE4872_PA00115 PF01039 Carboxyl transferase domain IE4872_PA00116 PF09856 Predicted transcriptional regulator (DUF2083) IE4872_PA00116 PF01381 Helix-turn-helix IE4872_PA00116 PF06114 IrrE N-terminal-like domain IE4872_PA00117 PF03743 Bacterial conjugation TrbI-like protein IE4872_PA00119 PF03524 Conjugal transfer protein IE4872_PA00120 PF04335 VirB8 protein IE4872_PA00122 PF10907 Protein of unknown function (DUF2749) IE4872_PA00124 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IE4872_PA00125 PF05101 Type IV secretory pathway, VirB3-like protein IE4872_PA00126 PF04956 TrbC/VIRB2 family IE4872_PA00127 PF00437 Type II/IV secretion system protein IE4872_PA00128 PF00765 Autoinducer synthase IE4872_PA00129 PF13614 AAA domain IE4872_PA00129 PF00376 MerR family regulatory protein IE4872_PA00130 PF07506 RepB plasmid partitioning protein IE4872_PA00130 PF02195 ParB-like nuclease domain IE4872_PA00131 PF11800 Replication protein C C-terminal region IE4872_PA00131 PF03428 Replication protein C N-terminal domain IE4872_PB00003 PF00239 Resolvase, N terminal domain IE4872_PB00004 PF07756 Protein of unknown function (DUF1612) IE4872_PB00004 PF11972 HTH DNA binding domain IE4872_PB00006 PF12705 PD-(D/E)XK nuclease superfamily IE4872_PB00006 PF00580 UvrD/REP helicase N-terminal domain IE4872_PB00006 PF13361 UvrD-like helicase C-terminal domain IE4872_PB00008 PF02463 RecF/RecN/SMC N terminal domain IE4872_PB00009 PF13361 UvrD-like helicase C-terminal domain IE4872_PB00009 PF00580 UvrD/REP helicase N-terminal domain IE4872_PB00022 PF00596 Class II Aldolase and Adducin N-terminal domain IE4872_PB00023 PF07005 Sugar-binding N-terminal domain IE4872_PB00023 PF17042 Nucleotide-binding C-terminal domain IE4872_PB00024 PF00171 Aldehyde dehydrogenase family IE4872_PB00025 PF13419 Haloacid dehalogenase-like hydrolase IE4872_PB00027 PF00180 Isocitrate/isopropylmalate dehydrogenase IE4872_PB00028 PF07729 FCD domain IE4872_PB00028 PF00392 Bacterial regulatory proteins, gntR family IE4872_PB00029 PF16363 GDP-mannose 4,6 dehydratase IE4872_PB00030 PF02653 Branched-chain amino acid transport system / permease component IE4872_PB00031 PF00005 ABC transporter IE4872_PB00032 PF13407 Periplasmic binding protein domain IE4872_PB00033 PF02780 Transketolase, C-terminal domain IE4872_PB00033 PF02779 Transketolase, pyrimidine binding domain IE4872_PB00033 PF00456 Transketolase, thiamine diphosphate binding domain IE4872_PB00034 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IE4872_PB00035 PF01116 Fructose-bisphosphate aldolase class-II IE4872_PB00036 PF00121 Triosephosphate isomerase IE4872_PB00037 PF02502 Ribose/Galactose Isomerase IE4872_PB00038 PF00392 Bacterial regulatory proteins, gntR family IE4872_PB00038 PF07729 FCD domain IE4872_PB00040 PF07005 Sugar-binding N-terminal domain IE4872_PB00040 PF17042 Nucleotide-binding C-terminal domain IE4872_PB00041 PF05853 beta-keto acid cleavage enzyme IE4872_PB00042 PF00005 ABC transporter IE4872_PB00043 PF02653 Branched-chain amino acid transport system / permease component IE4872_PB00044 PF13407 Periplasmic binding protein domain IE4872_PB00045 PF00248 Aldo/keto reductase family IE4872_PB00046 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain IE4872_PB00046 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain IE4872_PB00047 PF00248 Aldo/keto reductase family IE4872_PB00048 PF03481 Putative GTP-binding controlling metal-binding IE4872_PB00048 PF01300 Telomere recombination IE4872_PB00049 PF00248 Aldo/keto reductase family IE4872_PB00051 PF00753 Metallo-beta-lactamase superfamily IE4872_PB00052 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IE4872_PB00052 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IE4872_PB00052 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IE4872_PB00056 PF00106 short chain dehydrogenase IE4872_PB00057 PF00106 short chain dehydrogenase IE4872_PB00058 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PB00058 PF03466 LysR substrate binding domain IE4872_PB00059 PF07687 Peptidase dimerisation domain IE4872_PB00059 PF01546 Peptidase family M20/M25/M40 IE4872_PB00062 PF13407 Periplasmic binding protein domain IE4872_PB00063 PF00005 ABC transporter IE4872_PB00064 PF02653 Branched-chain amino acid transport system / permease component IE4872_PB00065 PF00596 Class II Aldolase and Adducin N-terminal domain IE4872_PB00066 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IE4872_PB00066 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IE4872_PB00067 PF03466 LysR substrate binding domain IE4872_PB00067 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PB00068 PF07702 UTRA domain IE4872_PB00068 PF00392 Bacterial regulatory proteins, gntR family IE4872_PB00069 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_PB00069 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IE4872_PB00072 PF00561 alpha/beta hydrolase fold IE4872_PB00073 PF13407 Periplasmic binding protein domain IE4872_PB00074 PF00005 ABC transporter IE4872_PB00075 PF02653 Branched-chain amino acid transport system / permease component IE4872_PB00076 PF02653 Branched-chain amino acid transport system / permease component IE4872_PB00077 PF00171 Aldehyde dehydrogenase family IE4872_PB00079 PF00107 Zinc-binding dehydrogenase IE4872_PB00079 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PB00080 PF13407 Periplasmic binding protein domain IE4872_PB00081 PF00005 ABC transporter IE4872_PB00082 PF02653 Branched-chain amino acid transport system / permease component IE4872_PB00083 PF02653 Branched-chain amino acid transport system / permease component IE4872_PB00084 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PB00084 PF00107 Zinc-binding dehydrogenase IE4872_PB00086 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PB00089 PF00672 HAMP domain IE4872_PB00089 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_PB00090 PF13407 Periplasmic binding protein domain IE4872_PB00094 PF00990 Diguanylate cyclase, GGDEF domain IE4872_PB00094 PF00563 EAL domain IE4872_PB00094 PF03707 Bacterial signalling protein N terminal repeat IE4872_PB00095 PF00672 HAMP domain IE4872_PB00095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_PB00098 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IE4872_PB00099 PF03358 NADPH-dependent FMN reductase IE4872_PB00100 PF02653 Branched-chain amino acid transport system / permease component IE4872_PB00101 PF02653 Branched-chain amino acid transport system / permease component IE4872_PB00102 PF00005 ABC transporter IE4872_PB00105 PF00155 Aminotransferase class I and II IE4872_PB00106 PF13407 Periplasmic binding protein domain IE4872_PB00107 PF00296 Luciferase-like monooxygenase IE4872_PB00108 PF02627 Carboxymuconolactone decarboxylase family IE4872_PB00109 PF01613 Flavin reductase like domain IE4872_PB00112 PF00561 alpha/beta hydrolase fold IE4872_PB00113 PF07702 UTRA domain IE4872_PB00113 PF00392 Bacterial regulatory proteins, gntR family IE4872_PB00115 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PB00115 PF00107 Zinc-binding dehydrogenase IE4872_PB00116 PF00753 Metallo-beta-lactamase superfamily IE4872_PB00117 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_PB00117 PF00672 HAMP domain IE4872_PB00119 PF07691 PA14 domain IE4872_PB00119 PF14310 Fibronectin type III-like domain IE4872_PB00119 PF00933 Glycosyl hydrolase family 3 N terminal domain IE4872_PB00119 PF01915 Glycosyl hydrolase family 3 C-terminal domain IE4872_PB00123 PF16123 Hydroxyacylglutathione hydrolase C-terminus IE4872_PB00123 PF00753 Metallo-beta-lactamase superfamily IE4872_PB00126 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IE4872_PB00127 PF03480 Bacterial extracellular solute-binding protein, family 7 IE4872_PB00127 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IE4872_PB00128 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IE4872_PB00128 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_PB00129 PF00561 alpha/beta hydrolase fold IE4872_PB00130 PF03466 LysR substrate binding domain IE4872_PB00130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PB00132 PF02733 Dak1 domain IE4872_PB00133 PF02734 DAK2 domain IE4872_PB00146 PF18818 Metallopeptidase superfamily domain IE4872_PB00146 PF08401 Domain of unknown function (DUF1738) IE4872_PB00146 PF13362 Toprim domain IE4872_PB00148 PF05284 Protein of unknown function (DUF736) IE4872_PB00154 PF05406 WGR domain IE4872_PB00156 PF02534 Type IV secretory system Conjugative DNA transfer IE4872_PB00157 PF06412 Conjugal transfer protein TraD IE4872_PB00158 PF07820 TraC-like protein IE4872_PB00159 PF01443 Viral (Superfamily 1) RNA helicase IE4872_PB00159 PF03389 MobA/MobL family IE4872_PB00159 PF17841 BID domain of Bartonella effector protein (Bep) IE4872_PB00160 PF00437 Type II/IV secretion system protein IE4872_PB00161 PF00765 Autoinducer synthase IE4872_PB00162 PF13614 AAA domain IE4872_PB00163 PF02195 ParB-like nuclease domain IE4872_PB00163 PF07506 RepB plasmid partitioning protein IE4872_PB00165 PF03428 Replication protein C N-terminal domain IE4872_PB00165 PF11800 Replication protein C C-terminal region IE4872_PC00004 PF00239 Resolvase, N terminal domain IE4872_PC00027 PF00264 Common central domain of tyrosinase IE4872_PC00037 PF00872 Transposase, Mutator family IE4872_PC00045 PF00665 Integrase core domain IE4872_PC00045 PF08281 Sigma-70, region 4 IE4872_PC00051 PF01527 Transposase IE4872_PC00053 PF02371 Transposase IS116/IS110/IS902 family IE4872_PC00053 PF01548 Transposase IE4872_PC00054 PF02769 AIR synthase related protein, C-terminal domain IE4872_PC00054 PF00586 AIR synthase related protein, N-terminal domain IE4872_PC00055 PF01924 Hydrogenase formation hypA family IE4872_PC00056 PF01455 HupF/HypC family IE4872_PC00057 PF01300 Telomere recombination IE4872_PC00057 PF17788 HypF Kae1-like domain IE4872_PC00057 PF00708 Acylphosphatase IE4872_PC00057 PF07503 HypF finger IE4872_PC00058 PF02492 CobW/HypB/UreG, nucleotide-binding domain IE4872_PC00059 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA IE4872_PC00060 PF00374 Nickel-dependent hydrogenase IE4872_PC00061 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE IE4872_PC00062 PF00301 Rubredoxin IE4872_PC00063 PF04809 HupH hydrogenase expression protein, C-terminal conserved region IE4872_PC00064 PF07449 Hydrogenase-1 expression protein HyaE IE4872_PC00065 PF01455 HupF/HypC family IE4872_PC00066 PF04955 HupE / UreJ protein IE4872_PC00067 PF01750 Hydrogenase maturation protease IE4872_PC00068 PF01292 Prokaryotic cytochrome b561 IE4872_PC00069 PF00374 Nickel-dependent hydrogenase IE4872_PC00070 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IE4872_PC00070 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal IE4872_PC00073 PF00672 HAMP domain IE4872_PC00073 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_PC00074 PF00313 'Cold-shock' DNA-binding domain IE4872_PC00076 PF13350 Tyrosine phosphatase family IE4872_PC00077 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00078 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00079 PF13416 Bacterial extracellular solute-binding protein IE4872_PC00080 PF00149 Calcineurin-like phosphoesterase IE4872_PC00083 PF07804 HipA-like C-terminal domain IE4872_PC00083 PF13657 HipA N-terminal domain IE4872_PC00085 PF01527 Transposase IE4872_PC00090 PF01979 Amidohydrolase family IE4872_PC00091 PF01380 SIS domain IE4872_PC00092 PF00392 Bacterial regulatory proteins, gntR family IE4872_PC00092 PF07702 UTRA domain IE4872_PC00093 PF01869 BadF/BadG/BcrA/BcrD ATPase family IE4872_PC00096 PF00480 ROK family IE4872_PC00096 PF01325 Iron dependent repressor, N-terminal DNA binding domain IE4872_PC00098 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00099 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PC00100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PC00101 PF00005 ABC transporter IE4872_PC00101 PF17912 MalK OB fold domain IE4872_PC00106 PF13419 Haloacid dehalogenase-like hydrolase IE4872_PC00107 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IE4872_PC00108 PF00480 ROK family IE4872_PC00111 PF05406 WGR domain IE4872_PC00113 PF08267 Cobalamin-independent synthase, N-terminal domain IE4872_PC00113 PF01717 Cobalamin-independent synthase, Catalytic domain IE4872_PC00114 PF01717 Cobalamin-independent synthase, Catalytic domain IE4872_PC00114 PF08267 Cobalamin-independent synthase, N-terminal domain IE4872_PC00118 PF00296 Luciferase-like monooxygenase IE4872_PC00119 PF00296 Luciferase-like monooxygenase IE4872_PC00120 PF01546 Peptidase family M20/M25/M40 IE4872_PC00120 PF07687 Peptidase dimerisation domain IE4872_PC00122 PF00005 ABC transporter IE4872_PC00125 PF00296 Luciferase-like monooxygenase IE4872_PC00127 PF03358 NADPH-dependent FMN reductase IE4872_PC00139 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PC00139 PF03466 LysR substrate binding domain IE4872_PC00140 PF05193 Peptidase M16 inactive domain IE4872_PC00141 PF05193 Peptidase M16 inactive domain IE4872_PC00141 PF00675 Insulinase (Peptidase family M16) IE4872_PC00145 PF03466 LysR substrate binding domain IE4872_PC00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PC00146 PF02474 Nodulation protein A (NodA) IE4872_PC00148 PF01757 Acyltransferase family IE4872_PC00149 PF00550 Phosphopantetheine attachment site IE4872_PC00150 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_PC00150 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_PC00152 PF10017 Histidine-specific methyltransferase, SAM-dependent IE4872_PC00154 PF05193 Peptidase M16 inactive domain IE4872_PC00155 PF00890 FAD binding domain IE4872_PC00155 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) IE4872_PC00157 PF00873 AcrB/AcrD/AcrF family IE4872_PC00163 PF06969 HemN C-terminal domain IE4872_PC00163 PF04055 Radical SAM superfamily IE4872_PC00165 PF01527 Transposase IE4872_PC00168 PF00313 'Cold-shock' DNA-binding domain IE4872_PC00170 PF00194 Eukaryotic-type carbonic anhydrase IE4872_PC00171 PF01380 SIS domain IE4872_PC00172 PF00127 Copper binding proteins, plastocyanin/azurin family IE4872_PC00173 PF07756 Protein of unknown function (DUF1612) IE4872_PC00173 PF11972 HTH DNA binding domain IE4872_PC00175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PC00175 PF03466 LysR substrate binding domain IE4872_PC00182 PF13237 4Fe-4S dicluster domain IE4872_PC00183 PF05082 Rop-like IE4872_PC00185 PF00115 Cytochrome C and Quinol oxidase polypeptide I IE4872_PC00188 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IE4872_PC00188 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IE4872_PC00189 PF13746 4Fe-4S dicluster domain IE4872_PC00189 PF12801 4Fe-4S binding domain IE4872_PC00189 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase IE4872_PC00190 PF05751 FixH IE4872_PC00191 PF00403 Heavy-metal-associated domain IE4872_PC00192 PF03597 Cytochrome oxidase maturation protein cbb3-type IE4872_PC00194 PF03922 OmpW family IE4872_PC00195 PF04055 Radical SAM superfamily IE4872_PC00196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PC00196 PF00512 His Kinase A (phospho-acceptor) domain IE4872_PC00196 PF00989 PAS fold IE4872_PC00197 PF00072 Response regulator receiver domain IE4872_PC00197 PF00196 Bacterial regulatory proteins, luxR family IE4872_PC00198 PF13545 Crp-like helix-turn-helix domain IE4872_PC00198 PF00027 Cyclic nucleotide-binding domain IE4872_PC00208 PF02474 Nodulation protein A (NodA) IE4872_PC00209 PF01522 Polysaccharide deacetylase IE4872_PC00210 PF00535 Glycosyl transferase family 2 IE4872_PC00211 PF05401 Nodulation protein S (NodS) IE4872_PC00212 PF02543 Carbamoyltransferase N-terminus IE4872_PC00212 PF16861 Carbamoyltransferase C-terminus IE4872_PC00213 PF00005 ABC transporter IE4872_PC00214 PF01061 ABC-2 type transporter IE4872_PC00215 PF00248 Aldo/keto reductase family IE4872_PC00216 PF00685 Sulfotransferase domain IE4872_PC00217 PF01507 Phosphoadenosine phosphosulfate reductase family IE4872_PC00218 PF00009 Elongation factor Tu GTP binding domain IE4872_PC00219 PF00155 Aminotransferase class I and II IE4872_PC00220 PF00296 Luciferase-like monooxygenase IE4872_PC00234 PF06988 NifT/FixU protein IE4872_PC00235 PF04319 NifZ domain IE4872_PC00236 PF12838 4Fe-4S dicluster domain IE4872_PC00237 PF04055 Radical SAM superfamily IE4872_PC00237 PF02579 Dinitrogenase iron-molybdenum cofactor IE4872_PC00238 PF01590 GAF domain IE4872_PC00238 PF02954 Bacterial regulatory protein, Fis family IE4872_PC00238 PF00158 Sigma-54 interaction domain IE4872_PC00241 PF01012 Electron transfer flavoprotein domain IE4872_PC00241 PF00766 Electron transfer flavoprotein FAD-binding domain IE4872_PC00242 PF01012 Electron transfer flavoprotein domain IE4872_PC00243 PF03206 Nitrogen fixation protein NifW IE4872_PC00249 PF00682 HMGL-like IE4872_PC00250 PF00266 Aminotransferase class-V IE4872_PC00251 PF01106 NifU-like domain IE4872_PC00251 PF04324 BFD-like [2Fe-2S] binding domain IE4872_PC00251 PF01592 NifU-like N terminal domain IE4872_PC00252 PF01521 Iron-sulphur cluster biosynthesis IE4872_PC00254 PF04891 NifQ IE4872_PC00255 PF04963 Sigma-54 factor, core binding domain IE4872_PC00255 PF00309 Sigma-54 factor, Activator interacting domain (AID) IE4872_PC00255 PF04552 Sigma-54, DNA binding domain IE4872_PC00256 PF08534 Redoxin IE4872_PC00260 PF01209 ubiE/COQ5 methyltransferase family IE4872_PC00261 PF13537 Glutamine amidotransferase domain IE4872_PC00261 PF00733 Asparagine synthase IE4872_PC00266 PF00005 ABC transporter IE4872_PC00267 PF07969 Amidohydrolase family IE4872_PC00268 PF00005 ABC transporter IE4872_PC00269 PF06007 Phosphonate metabolism protein PhnJ IE4872_PC00270 PF05861 Bacterial phosphonate metabolism protein (PhnI) IE4872_PC00271 PF05845 Bacterial phosphonate metabolism protein (PhnH) IE4872_PC00272 PF06754 Phosphonate metabolism protein PhnG IE4872_PC00275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PC00275 PF00005 ABC transporter IE4872_PC00276 PF00005 ABC transporter IE4872_PC00276 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PC00277 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PC00278 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PC00278 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00279 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00282 PF00483 Nucleotidyl transferase IE4872_PC00283 PF00155 Aminotransferase class I and II IE4872_PC00287 PF00067 Cytochrome P450 IE4872_PC00289 PF13577 SnoaL-like domain IE4872_PC00291 PF00296 Luciferase-like monooxygenase IE4872_PC00295 PF13005 zinc-finger binding domain of transposase IS66 IE4872_PC00295 PF13007 Transposase C of IS166 homeodomain IE4872_PC00295 PF13817 IS66 C-terminal element IE4872_PC00295 PF03050 Transposase IS66 family IE4872_PC00296 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family IE4872_PC00297 PF00148 Nitrogenase component 1 type Oxidoreductase IE4872_PC00298 PF00148 Nitrogenase component 1 type Oxidoreductase IE4872_PC00298 PF11844 Domain of unknown function (DUF3364) IE4872_PC00299 PF00148 Nitrogenase component 1 type Oxidoreductase IE4872_PC00300 PF00148 Nitrogenase component 1 type Oxidoreductase IE4872_PC00301 PF02579 Dinitrogenase iron-molybdenum cofactor IE4872_PC00302 PF03270 Protein of unknown function, DUF269 IE4872_PC00303 PF05082 Rop-like IE4872_PC00304 PF13237 4Fe-4S dicluster domain IE4872_PC00306 PF00550 Phosphopantetheine attachment site IE4872_PC00311 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_PC00315 PF00148 Nitrogenase component 1 type Oxidoreductase IE4872_PC00317 PF02261 Aspartate decarboxylase IE4872_PC00320 PF02899 Phage integrase, N-terminal SAM-like domain IE4872_PC00320 PF00589 Phage integrase family IE4872_PC00324 PF07478 D-ala D-ala ligase C-terminus IE4872_PC00326 PF01548 Transposase IE4872_PC00326 PF02371 Transposase IS116/IS110/IS902 family IE4872_PC00327 PF02371 Transposase IS116/IS110/IS902 family IE4872_PC00327 PF01548 Transposase IE4872_PC00329 PF02615 Malate/L-lactate dehydrogenase IE4872_PC00331 PF01070 FMN-dependent dehydrogenase IE4872_PC00335 PF07690 Major Facilitator Superfamily IE4872_PC00338 PF00202 Aminotransferase class-III IE4872_PC00339 PF03472 Autoinducer binding domain IE4872_PC00339 PF00196 Bacterial regulatory proteins, luxR family IE4872_PC00341 PF13840 ACT domain IE4872_PC00341 PF00696 Amino acid kinase family IE4872_PC00341 PF01842 ACT domain IE4872_PC00342 PF01118 Semialdehyde dehydrogenase, NAD binding domain IE4872_PC00342 PF02774 Semialdehyde dehydrogenase, dimerisation domain IE4872_PC00344 PF00296 Luciferase-like monooxygenase IE4872_PC00345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_PC00345 PF18603 L-amino acid ligase C-terminal domain 2 IE4872_PC00347 PF04183 IucA / IucC family IE4872_PC00347 PF06276 Ferric iron reductase FhuF-like transporter IE4872_PC00349 PF02811 PHP domain IE4872_PC00349 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IE4872_PC00349 PF14579 Helix-hairpin-helix motif IE4872_PC00349 PF07733 Bacterial DNA polymerase III alpha NTPase domain IE4872_PC00351 PF00392 Bacterial regulatory proteins, gntR family IE4872_PC00351 PF00155 Aminotransferase class I and II IE4872_PC00352 PF00171 Aldehyde dehydrogenase family IE4872_PC00353 PF01042 Endoribonuclease L-PSP IE4872_PC00354 PF01266 FAD dependent oxidoreductase IE4872_PC00355 PF01168 Alanine racemase, N-terminal domain IE4872_PC00355 PF00842 Alanine racemase, C-terminal domain IE4872_PC00356 PF01037 Lrp/AsnC ligand binding domain IE4872_PC00357 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IE4872_PC00357 PF00326 Prolyl oligopeptidase family IE4872_PC00358 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PC00358 PF00005 ABC transporter IE4872_PC00359 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PC00359 PF00005 ABC transporter IE4872_PC00360 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00361 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00362 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PC00365 PF03466 LysR substrate binding domain IE4872_PC00365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PC00366 PF01425 Amidase IE4872_PC00371 PF01425 Amidase IE4872_PC00373 PF00005 ABC transporter IE4872_PC00374 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00375 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00378 PF01037 Lrp/AsnC ligand binding domain IE4872_PC00379 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_PC00380 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_PC00381 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00382 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00383 PF00005 ABC transporter IE4872_PC00386 PF07687 Peptidase dimerisation domain IE4872_PC00386 PF01546 Peptidase family M20/M25/M40 IE4872_PC00387 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_PC00388 PF02423 Ornithine cyclodeaminase/mu-crystallin family IE4872_PC00389 PF01321 Creatinase/Prolidase N-terminal domain IE4872_PC00389 PF00557 Metallopeptidase family M24 IE4872_PC00390 PF00202 Aminotransferase class-III IE4872_PC00391 PF00171 Aldehyde dehydrogenase family IE4872_PC00392 PF10415 Fumarase C C-terminus IE4872_PC00392 PF00206 Lyase IE4872_PC00394 PF00180 Isocitrate/isopropylmalate dehydrogenase IE4872_PC00399 PF00202 Aminotransferase class-III IE4872_PC00403 PF06793 Uncharacterised protein family (UPF0262) IE4872_PC00408 PF00665 Integrase core domain IE4872_PC00408 PF13936 Helix-turn-helix domain IE4872_PC00411 PF00665 Integrase core domain IE4872_PC00411 PF13936 Helix-turn-helix domain IE4872_PC00413 PF00005 ABC transporter IE4872_PC00413 PF12857 TOBE-like domain IE4872_PC00415 PF00375 Sodium:dicarboxylate symporter family IE4872_PC00418 PF00034 Cytochrome c IE4872_PC00418 PF03150 Di-haem cytochrome c peroxidase IE4872_PC00421 PF00067 Cytochrome P450 IE4872_PC00422 PF00067 Cytochrome P450 IE4872_PC00423 PF00067 Cytochrome P450 IE4872_PC00426 PF00067 Cytochrome P450 IE4872_PC00427 PF00348 Polyprenyl synthetase IE4872_PC00435 PF00005 ABC transporter IE4872_PC00435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PC00437 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00438 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PC00444 PF03358 NADPH-dependent FMN reductase IE4872_PC00446 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00447 PF00005 ABC transporter IE4872_PC00447 PF09383 NIL domain IE4872_PC00448 PF03180 NLPA lipoprotein IE4872_PC00449 PF00296 Luciferase-like monooxygenase IE4872_PC00450 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PC00450 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_PC00450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PC00451 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PC00451 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PC00452 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00453 PF09383 NIL domain IE4872_PC00453 PF00005 ABC transporter IE4872_PC00454 PF03180 NLPA lipoprotein IE4872_PC00455 PF02082 Transcriptional regulator IE4872_PC00457 PF00296 Luciferase-like monooxygenase IE4872_PC00459 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PC00462 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PC00462 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PC00462 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_PC00463 PF00296 Luciferase-like monooxygenase IE4872_PC00464 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PC00464 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PC00465 PF02653 Branched-chain amino acid transport system / permease component IE4872_PC00466 PF02653 Branched-chain amino acid transport system / permease component IE4872_PC00467 PF00005 ABC transporter IE4872_PC00470 PF00005 ABC transporter IE4872_PC00471 PF02653 Branched-chain amino acid transport system / permease component IE4872_PC00472 PF00296 Luciferase-like monooxygenase IE4872_PC00473 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IE4872_PC00473 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IE4872_PC00473 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IE4872_PC00474 PF00108 Thiolase, N-terminal domain IE4872_PC00474 PF02803 Thiolase, C-terminal domain IE4872_PC00475 PF00155 Aminotransferase class I and II IE4872_PC00476 PF07690 Major Facilitator Superfamily IE4872_PC00478 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IE4872_PC00478 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IE4872_PC00478 PF00378 Enoyl-CoA hydratase/isomerase IE4872_PC00479 PF02371 Transposase IS116/IS110/IS902 family IE4872_PC00479 PF01548 Transposase IE4872_PC00485 PF13362 Toprim domain IE4872_PC00485 PF18818 Metallopeptidase superfamily domain IE4872_PC00485 PF08401 Domain of unknown function (DUF1738) IE4872_PC00488 PF05284 Protein of unknown function (DUF736) IE4872_PC00491 PF00486 Transcriptional regulatory protein, C terminal IE4872_PC00491 PF00072 Response regulator receiver domain IE4872_PC00492 PF00360 Phytochrome region IE4872_PC00492 PF00990 Diguanylate cyclase, GGDEF domain IE4872_PC00492 PF01590 GAF domain IE4872_PC00492 PF00563 EAL domain IE4872_PC00493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PC00493 PF13426 PAS domain IE4872_PC00493 PF00072 Response regulator receiver domain IE4872_PC00494 PF05406 WGR domain IE4872_PC00496 PF03466 LysR substrate binding domain IE4872_PC00496 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PC00497 PF02474 Nodulation protein A (NodA) IE4872_PC00500 PF01740 STAS domain IE4872_PC00500 PF00916 Sulfate permease family IE4872_PC00502 PF08274 PhnA Zinc-Ribbon IE4872_PC00502 PF03831 PhnA domain IE4872_PC00503 PF02534 Type IV secretory system Conjugative DNA transfer IE4872_PC00504 PF06412 Conjugal transfer protein TraD IE4872_PC00505 PF07820 TraC-like protein IE4872_PC00506 PF17841 BID domain of Bartonella effector protein (Bep) IE4872_PC00506 PF01443 Viral (Superfamily 1) RNA helicase IE4872_PC00506 PF03389 MobA/MobL family IE4872_PC00507 PF10502 Signal peptidase, peptidase S26 IE4872_PC00508 PF00795 Carbon-nitrogen hydrolase IE4872_PC00509 PF06871 TraH_2 IE4872_PC00512 PF01381 Helix-turn-helix IE4872_PC00513 PF09228 Prokaryotic Transcriptional repressor TraM IE4872_PC00514 PF03472 Autoinducer binding domain IE4872_PC00514 PF00196 Bacterial regulatory proteins, luxR family IE4872_PC00515 PF03743 Bacterial conjugation TrbI-like protein IE4872_PC00516 PF08139 Prokaryotic membrane lipoprotein lipid attachment site IE4872_PC00517 PF03524 Conjugal transfer protein IE4872_PC00518 PF04335 VirB8 protein IE4872_PC00519 PF04610 TrbL/VirB6 plasmid conjugal transfer protein IE4872_PC00520 PF10907 Protein of unknown function (DUF2749) IE4872_PC00522 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IE4872_PC00523 PF05101 Type IV secretory pathway, VirB3-like protein IE4872_PC00524 PF04956 TrbC/VIRB2 family IE4872_PC00525 PF00437 Type II/IV secretion system protein IE4872_PC00526 PF00765 Autoinducer synthase IE4872_PC00528 PF13614 AAA domain IE4872_PC00528 PF00376 MerR family regulatory protein IE4872_PC00529 PF07506 RepB plasmid partitioning protein IE4872_PC00529 PF02195 ParB-like nuclease domain IE4872_PC00530 PF11800 Replication protein C C-terminal region IE4872_PC00530 PF03428 Replication protein C N-terminal domain IE4872_PD00001 PF00005 ABC transporter IE4872_PD00002 PF01032 FecCD transport family IE4872_PD00005 PF11972 HTH DNA binding domain IE4872_PD00005 PF07756 Protein of unknown function (DUF1612) IE4872_PD00007 PF01850 PIN domain IE4872_PD00009 PF05974 Domain of unknown function (DUF892) IE4872_PD00012 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00012 PF03466 LysR substrate binding domain IE4872_PD00013 PF00141 Peroxidase IE4872_PD00014 PF00293 NUDIX domain IE4872_PD00016 PF01037 Lrp/AsnC ligand binding domain IE4872_PD00017 PF00561 alpha/beta hydrolase fold IE4872_PD00019 PF00512 His Kinase A (phospho-acceptor) domain IE4872_PD00019 PF00989 PAS fold IE4872_PD00019 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD00020 PF00072 Response regulator receiver domain IE4872_PD00021 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_PD00024 PF13784 Fic/DOC family N-terminal IE4872_PD00024 PF02661 Fic/DOC family IE4872_PD00025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00025 PF03466 LysR substrate binding domain IE4872_PD00027 PF03466 LysR substrate binding domain IE4872_PD00027 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00033 PF14525 AraC-binding-like domain IE4872_PD00033 PF12833 Helix-turn-helix domain IE4872_PD00035 PF00561 alpha/beta hydrolase fold IE4872_PD00038 PF01979 Amidohydrolase family IE4872_PD00041 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_PD00042 PF03466 LysR substrate binding domain IE4872_PD00042 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00044 PF01638 HxlR-like helix-turn-helix IE4872_PD00046 PF08264 Anticodon-binding domain of tRNA IE4872_PD00046 PF00133 tRNA synthetases class I (I, L, M and V) IE4872_PD00046 PF09334 tRNA synthetases class I (M) IE4872_PD00049 PF02254 TrkA-N domain IE4872_PD00049 PF00999 Sodium/hydrogen exchanger family IE4872_PD00050 PF03447 Homoserine dehydrogenase, NAD binding domain IE4872_PD00050 PF00742 Homoserine dehydrogenase IE4872_PD00050 PF01842 ACT domain IE4872_PD00051 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_PD00051 PF16197 Ketoacyl-synthetase C-terminal extension IE4872_PD00051 PF08659 KR domain IE4872_PD00051 PF00550 Phosphopantetheine attachment site IE4872_PD00051 PF14765 Polyketide synthase dehydratase IE4872_PD00051 PF00107 Zinc-binding dehydrogenase IE4872_PD00051 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD00051 PF00698 Acyl transferase domain IE4872_PD00051 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_PD00053 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00053 PF03466 LysR substrate binding domain IE4872_PD00054 PF00857 Isochorismatase family IE4872_PD00056 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00056 PF03466 LysR substrate binding domain IE4872_PD00057 PF05726 Pirin C-terminal cupin domain IE4872_PD00057 PF02678 Pirin IE4872_PD00061 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00061 PF03466 LysR substrate binding domain IE4872_PD00062 PF01979 Amidohydrolase family IE4872_PD00062 PF13382 Adenine deaminase C-terminal domain IE4872_PD00067 PF00005 ABC transporter IE4872_PD00067 PF17912 MalK OB fold domain IE4872_PD00067 PF03459 TOBE domain IE4872_PD00070 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00071 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD00073 PF00294 pfkB family carbohydrate kinase IE4872_PD00075 PF00486 Transcriptional regulatory protein, C terminal IE4872_PD00075 PF00072 Response regulator receiver domain IE4872_PD00076 PF00155 Aminotransferase class I and II IE4872_PD00079 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00080 PF00005 ABC transporter IE4872_PD00080 PF08402 TOBE domain IE4872_PD00082 PF00202 Aminotransferase class-III IE4872_PD00083 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IE4872_PD00083 PF00205 Thiamine pyrophosphate enzyme, central domain IE4872_PD00083 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IE4872_PD00087 PF00313 'Cold-shock' DNA-binding domain IE4872_PD00093 PF05284 Protein of unknown function (DUF736) IE4872_PD00104 PF01037 Lrp/AsnC ligand binding domain IE4872_PD00106 PF02534 Type IV secretory system Conjugative DNA transfer IE4872_PD00107 PF00437 Type II/IV secretion system protein IE4872_PD00108 PF03743 Bacterial conjugation TrbI-like protein IE4872_PD00109 PF03524 Conjugal transfer protein IE4872_PD00114 PF01464 Transglycosylase SLT domain IE4872_PD00115 PF03135 CagE, TrbE, VirB family, component of type IV transporter system IE4872_PD00117 PF04956 TrbC/VIRB2 family IE4872_PD00131 PF07728 AAA domain (dynein-related subfamily) IE4872_PD00131 PF12102 Domain of unknown function (DUF3578) IE4872_PD00133 PF13193 AMP-binding enzyme C-terminal domain IE4872_PD00133 PF00501 AMP-binding enzyme IE4872_PD00135 PF00141 Peroxidase IE4872_PD00136 PF01012 Electron transfer flavoprotein domain IE4872_PD00137 PF01012 Electron transfer flavoprotein domain IE4872_PD00137 PF00766 Electron transfer flavoprotein FAD-binding domain IE4872_PD00139 PF00106 short chain dehydrogenase IE4872_PD00140 PF00378 Enoyl-CoA hydratase/isomerase IE4872_PD00143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00143 PF03466 LysR substrate binding domain IE4872_PD00144 PF13193 AMP-binding enzyme C-terminal domain IE4872_PD00144 PF00501 AMP-binding enzyme IE4872_PD00145 PF00561 alpha/beta hydrolase fold IE4872_PD00151 PF00378 Enoyl-CoA hydratase/isomerase IE4872_PD00152 PF12697 Alpha/beta hydrolase family IE4872_PD00153 PF03060 Nitronate monooxygenase IE4872_PD00154 PF00892 EamA-like transporter family IE4872_PD00155 PF00378 Enoyl-CoA hydratase/isomerase IE4872_PD00157 PF01614 Bacterial transcriptional regulator IE4872_PD00157 PF09339 IclR helix-turn-helix domain IE4872_PD00162 PF04962 KduI/IolB family IE4872_PD00164 PF00378 Enoyl-CoA hydratase/isomerase IE4872_PD00165 PF00106 short chain dehydrogenase IE4872_PD00166 PF07690 Major Facilitator Superfamily IE4872_PD00167 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_PD00167 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PD00167 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PD00168 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PD00168 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_PD00168 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PD00171 PF00005 ABC transporter IE4872_PD00171 PF12399 Branched-chain amino acid ATP-binding cassette transporter IE4872_PD00172 PF00005 ABC transporter IE4872_PD00173 PF00106 short chain dehydrogenase IE4872_PD00174 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00174 PF03466 LysR substrate binding domain IE4872_PD00176 PF01494 FAD binding domain IE4872_PD00177 PF01557 Fumarylacetoacetate (FAA) hydrolase family IE4872_PD00178 PF07883 Cupin domain IE4872_PD00180 PF00890 FAD binding domain IE4872_PD00182 PF14537 Cytochrome c3 IE4872_PD00182 PF00890 FAD binding domain IE4872_PD00191 PF03401 Tripartite tricarboxylate transporter family receptor IE4872_PD00192 PF03401 Tripartite tricarboxylate transporter family receptor IE4872_PD00193 PF01970 Tripartite tricarboxylate transporter TctA family IE4872_PD00198 PF00005 ABC transporter IE4872_PD00199 PF02687 FtsX-like permease family IE4872_PD00200 PF00529 HlyD membrane-fusion protein of T1SS IE4872_PD00200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IE4872_PD00202 PF04116 Fatty acid hydroxylase superfamily IE4872_PD00205 PF00072 Response regulator receiver domain IE4872_PD00205 PF00486 Transcriptional regulatory protein, C terminal IE4872_PD00206 PF00512 His Kinase A (phospho-acceptor) domain IE4872_PD00206 PF00672 HAMP domain IE4872_PD00206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD00209 PF01565 FAD binding domain IE4872_PD00209 PF02913 FAD linked oxidases, C-terminal domain IE4872_PD00210 PF00155 Aminotransferase class I and II IE4872_PD00211 PF01613 Flavin reductase like domain IE4872_PD00213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00213 PF03466 LysR substrate binding domain IE4872_PD00214 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD00214 PF07702 UTRA domain IE4872_PD00216 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00217 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00218 PF00005 ABC transporter IE4872_PD00219 PF00491 Arginase family IE4872_PD00222 PF05114 Protein of unknown function (DUF692) IE4872_PD00226 PF04545 Sigma-70, region 4 IE4872_PD00226 PF04542 Sigma-70 region 2 IE4872_PD00228 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_PD00231 PF13340 Putative transposase of IS4/5 family (DUF4096) IE4872_PD00234 PF00857 Isochorismatase family IE4872_PD00236 PF00106 short chain dehydrogenase IE4872_PD00238 PF12833 Helix-turn-helix domain IE4872_PD00238 PF12852 Cupin IE4872_PD00239 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_PD00241 PF01799 [2Fe-2S] binding domain IE4872_PD00241 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_PD00242 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_PD00243 PF01799 [2Fe-2S] binding domain IE4872_PD00243 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_PD00245 PF02796 Helix-turn-helix domain of resolvase IE4872_PD00245 PF00239 Resolvase, N terminal domain IE4872_PD00246 PF05199 GMC oxidoreductase IE4872_PD00246 PF00732 GMC oxidoreductase IE4872_PD00247 PF01979 Amidohydrolase family IE4872_PD00249 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00250 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00251 PF08402 TOBE domain IE4872_PD00251 PF00005 ABC transporter IE4872_PD00252 PF07687 Peptidase dimerisation domain IE4872_PD00252 PF01546 Peptidase family M20/M25/M40 IE4872_PD00255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IE4872_PD00255 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PD00256 PF00171 Aldehyde dehydrogenase family IE4872_PD00257 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00257 PF03466 LysR substrate binding domain IE4872_PD00260 PF10415 Fumarase C C-terminus IE4872_PD00260 PF00206 Lyase IE4872_PD00261 PF01012 Electron transfer flavoprotein domain IE4872_PD00262 PF00766 Electron transfer flavoprotein FAD-binding domain IE4872_PD00262 PF01012 Electron transfer flavoprotein domain IE4872_PD00269 PF00005 ABC transporter IE4872_PD00270 PF00005 ABC transporter IE4872_PD00270 PF12399 Branched-chain amino acid ATP-binding cassette transporter IE4872_PD00271 PF00067 Cytochrome P450 IE4872_PD00272 PF04909 Amidohydrolase IE4872_PD00274 PF03737 Aldolase/RraA IE4872_PD00276 PF14759 Reductase C-terminal IE4872_PD00276 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PD00277 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_PD00278 PF02233 NAD(P) transhydrogenase beta subunit IE4872_PD00279 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IE4872_PD00279 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IE4872_PD00279 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IE4872_PD00280 PF00107 Zinc-binding dehydrogenase IE4872_PD00280 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD00281 PF04264 YceI-like domain IE4872_PD00283 PF00440 Bacterial regulatory proteins, tetR family IE4872_PD00285 PF00107 Zinc-binding dehydrogenase IE4872_PD00285 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD00288 PF04828 Glutathione-dependent formaldehyde-activating enzyme IE4872_PD00291 PF01209 ubiE/COQ5 methyltransferase family IE4872_PD00292 PF16859 Tetracyclin repressor-like, C-terminal domain IE4872_PD00292 PF00440 Bacterial regulatory proteins, tetR family IE4872_PD00293 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PD00294 PF01261 Xylose isomerase-like TIM barrel IE4872_PD00295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD00295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD00298 PF02801 Beta-ketoacyl synthase, C-terminal domain IE4872_PD00298 PF00109 Beta-ketoacyl synthase, N-terminal domain IE4872_PD00301 PF00873 AcrB/AcrD/AcrF family IE4872_PD00305 PF00106 short chain dehydrogenase IE4872_PD00306 PF01261 Xylose isomerase-like TIM barrel IE4872_PD00307 PF01261 Xylose isomerase-like TIM barrel IE4872_PD00308 PF13378 Enolase C-terminal domain-like IE4872_PD00308 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IE4872_PD00309 PF07729 FCD domain IE4872_PD00309 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD00310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IE4872_PD00310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_PD00311 PF00005 ABC transporter IE4872_PD00311 PF08402 TOBE domain IE4872_PD00312 PF00005 ABC transporter IE4872_PD00312 PF17912 MalK OB fold domain IE4872_PD00314 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00315 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00319 PF09370 Phosphoenolpyruvate hydrolase-like IE4872_PD00324 PF02615 Malate/L-lactate dehydrogenase IE4872_PD00325 PF00465 Iron-containing alcohol dehydrogenase IE4872_PD00326 PF00171 Aldehyde dehydrogenase family IE4872_PD00329 PF00171 Aldehyde dehydrogenase family IE4872_PD00330 PF07063 Domain of unknown function (DUF1338) IE4872_PD00331 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00331 PF03466 LysR substrate binding domain IE4872_PD00332 PF00672 HAMP domain IE4872_PD00332 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_PD00333 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD00334 PF13407 Periplasmic binding protein domain IE4872_PD00335 PF00005 ABC transporter IE4872_PD00336 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD00337 PF13407 Periplasmic binding protein domain IE4872_PD00338 PF01261 Xylose isomerase-like TIM barrel IE4872_PD00339 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD00339 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD00341 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD00341 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD00342 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD00342 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD00343 PF01261 Xylose isomerase-like TIM barrel IE4872_PD00344 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD00344 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD00345 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD00352 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00354 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD00354 PF00107 Zinc-binding dehydrogenase IE4872_PD00355 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD00355 PF07702 UTRA domain IE4872_PD00358 PF00149 Calcineurin-like phosphoesterase IE4872_PD00358 PF12320 Type 5 capsule protein repressor C-terminal domain IE4872_PD00359 PF13476 AAA domain IE4872_PD00360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IE4872_PD00360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IE4872_PD00362 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00362 PF03466 LysR substrate binding domain IE4872_PD00365 PF08241 Methyltransferase domain IE4872_PD00368 PF14760 Rnk N-terminus IE4872_PD00368 PF01272 Transcription elongation factor, GreA/GreB, C-term IE4872_PD00369 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IE4872_PD00369 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IE4872_PD00373 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00373 PF03466 LysR substrate binding domain IE4872_PD00375 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PD00375 PF14759 Reductase C-terminal IE4872_PD00376 PF00480 ROK family IE4872_PD00377 PF00834 Ribulose-phosphate 3 epimerase family IE4872_PD00380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD00380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD00383 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD00383 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD00384 PF07859 alpha/beta hydrolase fold IE4872_PD00385 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD00386 PF00455 DeoR C terminal sensor domain IE4872_PD00386 PF08220 DeoR-like helix-turn-helix domain IE4872_PD00387 PF01791 DeoC/LacD family aldolase IE4872_PD00388 PF00294 pfkB family carbohydrate kinase IE4872_PD00389 PF00005 ABC transporter IE4872_PD00389 PF17912 MalK OB fold domain IE4872_PD00392 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00393 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00395 PF00501 AMP-binding enzyme IE4872_PD00395 PF01553 Acyltransferase IE4872_PD00396 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_PD00396 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IE4872_PD00396 PF00034 Cytochrome c IE4872_PD00397 PF01799 [2Fe-2S] binding domain IE4872_PD00397 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_PD00399 PF00034 Cytochrome c IE4872_PD00401 PF00072 Response regulator receiver domain IE4872_PD00401 PF00486 Transcriptional regulatory protein, C terminal IE4872_PD00402 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD00402 PF00512 His Kinase A (phospho-acceptor) domain IE4872_PD00402 PF00672 HAMP domain IE4872_PD00404 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD00405 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD00406 PF00005 ABC transporter IE4872_PD00407 PF13407 Periplasmic binding protein domain IE4872_PD00408 PF07730 Histidine kinase IE4872_PD00408 PF05384 Sensor protein DegS IE4872_PD00408 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD00410 PF00691 OmpA family IE4872_PD00412 PF03741 Integral membrane protein TerC family IE4872_PD00415 PF00005 ABC transporter IE4872_PD00420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00420 PF03466 LysR substrate binding domain IE4872_PD00423 PF00155 Aminotransferase class I and II IE4872_PD00423 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD00425 PF01527 Transposase IE4872_PD00431 PF17954 Quercetinase C-terminal cupin domain IE4872_PD00431 PF02678 Pirin IE4872_PD00432 PF07690 Major Facilitator Superfamily IE4872_PD00435 PF00313 'Cold-shock' DNA-binding domain IE4872_PD00439 PF02502 Ribose/Galactose Isomerase IE4872_PD00440 PF00121 Triosephosphate isomerase IE4872_PD00441 PF00455 DeoR C terminal sensor domain IE4872_PD00441 PF08220 DeoR-like helix-turn-helix domain IE4872_PD00442 PF04198 Putative sugar-binding domain IE4872_PD00443 PF01261 Xylose isomerase-like TIM barrel IE4872_PD00444 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IE4872_PD00444 PF01266 FAD dependent oxidoreductase IE4872_PD00445 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IE4872_PD00445 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IE4872_PD00447 PF00005 ABC transporter IE4872_PD00448 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD00449 PF13407 Periplasmic binding protein domain IE4872_PD00450 PF05573 NosL IE4872_PD00450 PF08220 DeoR-like helix-turn-helix domain IE4872_PD00451 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IE4872_PD00451 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IE4872_PD00452 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IE4872_PD00452 PF01266 FAD dependent oxidoreductase IE4872_PD00453 PF01116 Fructose-bisphosphate aldolase class-II IE4872_PD00454 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_PD00455 PF01037 Lrp/AsnC ligand binding domain IE4872_PD00456 PF00005 ABC transporter IE4872_PD00457 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_PD00458 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00459 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00464 PF01070 FMN-dependent dehydrogenase IE4872_PD00473 PF00005 ABC transporter IE4872_PD00474 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD00475 PF13936 Helix-turn-helix domain IE4872_PD00475 PF04198 Putative sugar-binding domain IE4872_PD00476 PF00248 Aldo/keto reductase family IE4872_PD00477 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IE4872_PD00477 PF01266 FAD dependent oxidoreductase IE4872_PD00479 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IE4872_PD00479 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IE4872_PD00480 PF00732 GMC oxidoreductase IE4872_PD00480 PF05199 GMC oxidoreductase IE4872_PD00487 PF04679 ATP dependent DNA ligase C terminal region IE4872_PD00487 PF13298 DNA polymerase Ligase (LigD) IE4872_PD00487 PF01068 ATP dependent DNA ligase domain IE4872_PD00488 PF13298 DNA polymerase Ligase (LigD) IE4872_PD00488 PF01068 ATP dependent DNA ligase domain IE4872_PD00488 PF04679 ATP dependent DNA ligase C terminal region IE4872_PD00489 PF02735 Ku70/Ku80 beta-barrel domain IE4872_PD00490 PF02735 Ku70/Ku80 beta-barrel domain IE4872_PD00492 PF00484 Carbonic anhydrase IE4872_PD00497 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00497 PF03466 LysR substrate binding domain IE4872_PD00499 PF00216 Bacterial DNA-binding protein IE4872_PD00500 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_PD00500 PF01799 [2Fe-2S] binding domain IE4872_PD00500 PF10518 TAT (twin-arginine translocation) pathway signal sequence IE4872_PD00501 PF00941 FAD binding domain in molybdopterin dehydrogenase IE4872_PD00501 PF03450 CO dehydrogenase flavoprotein C-terminal domain IE4872_PD00502 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_PD00502 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IE4872_PD00504 PF03466 LysR substrate binding domain IE4872_PD00504 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00514 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_PD00515 PF01042 Endoribonuclease L-PSP IE4872_PD00516 PF02525 Flavodoxin-like fold IE4872_PD00518 PF07969 Amidohydrolase family IE4872_PD00520 PF00005 ABC transporter IE4872_PD00523 PF02633 Creatinine amidohydrolase IE4872_PD00527 PF00005 ABC transporter IE4872_PD00528 PF02608 ABC transporter substrate-binding protein PnrA-like IE4872_PD00529 PF01979 Amidohydrolase family IE4872_PD00530 PF14497 Glutathione S-transferase, C-terminal domain IE4872_PD00530 PF02798 Glutathione S-transferase, N-terminal domain IE4872_PD00535 PF00011 Hsp20/alpha crystallin family IE4872_PD00537 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00538 PF12857 TOBE-like domain IE4872_PD00538 PF00005 ABC transporter IE4872_PD00539 PF09347 Domain of unknown function (DUF1989) IE4872_PD00541 PF00289 Biotin carboxylase, N-terminal domain IE4872_PD00541 PF00364 Biotin-requiring enzyme IE4872_PD00541 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_PD00541 PF02785 Biotin carboxylase C-terminal domain IE4872_PD00542 PF01425 Amidase IE4872_PD00546 PF00183 Hsp90 protein IE4872_PD00549 PF00005 ABC transporter IE4872_PD00550 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD00552 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IE4872_PD00552 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD00553 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_PD00555 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00556 PF00005 ABC transporter IE4872_PD00557 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD00559 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IE4872_PD00559 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_PD00560 PF01202 Shikimate kinase IE4872_PD00562 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_PD00562 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IE4872_PD00563 PF00107 Zinc-binding dehydrogenase IE4872_PD00563 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD00566 PF01381 Helix-turn-helix IE4872_PD00570 PF00561 alpha/beta hydrolase fold IE4872_PD00571 PF03472 Autoinducer binding domain IE4872_PD00571 PF00196 Bacterial regulatory proteins, luxR family IE4872_PD00572 PF00561 alpha/beta hydrolase fold IE4872_PD00573 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00574 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00574 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PD00575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD00575 PF00005 ABC transporter IE4872_PD00576 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD00578 PF01527 Transposase IE4872_PD00581 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_PD00582 PF07690 Major Facilitator Superfamily IE4872_PD00583 PF13533 Biotin-lipoyl like IE4872_PD00585 PF05726 Pirin C-terminal cupin domain IE4872_PD00585 PF02678 Pirin IE4872_PD00588 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00588 PF03466 LysR substrate binding domain IE4872_PD00590 PF00072 Response regulator receiver domain IE4872_PD00590 PF00196 Bacterial regulatory proteins, luxR family IE4872_PD00595 PF00512 His Kinase A (phospho-acceptor) domain IE4872_PD00595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD00595 PF00989 PAS fold IE4872_PD00596 PF00486 Transcriptional regulatory protein, C terminal IE4872_PD00596 PF00072 Response regulator receiver domain IE4872_PD00599 PF01593 Flavin containing amine oxidoreductase IE4872_PD00600 PF00999 Sodium/hydrogen exchanger family IE4872_PD00601 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00602 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00604 PF00005 ABC transporter IE4872_PD00604 PF08402 TOBE domain IE4872_PD00605 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD00605 PF00155 Aminotransferase class I and II IE4872_PD00606 PF01266 FAD dependent oxidoreductase IE4872_PD00608 PF00128 Alpha amylase, catalytic domain IE4872_PD00608 PF11896 Domain of unknown function (DUF3416) IE4872_PD00609 PF16657 Maltogenic Amylase, C-terminal domain IE4872_PD00609 PF00128 Alpha amylase, catalytic domain IE4872_PD00610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IE4872_PD00610 PF02806 Alpha amylase, C-terminal all-beta domain IE4872_PD00610 PF00128 Alpha amylase, catalytic domain IE4872_PD00611 PF00563 EAL domain IE4872_PD00611 PF08448 PAS fold IE4872_PD00611 PF08447 PAS fold IE4872_PD00611 PF00990 Diguanylate cyclase, GGDEF domain IE4872_PD00612 PF00072 Response regulator receiver domain IE4872_PD00612 PF00196 Bacterial regulatory proteins, luxR family IE4872_PD00614 PF00480 ROK family IE4872_PD00614 PF01325 Iron dependent repressor, N-terminal DNA binding domain IE4872_PD00616 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00617 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00619 PF12833 Helix-turn-helix domain IE4872_PD00619 PF01497 Periplasmic binding protein IE4872_PD00620 PF11975 Family 4 glycosyl hydrolase C-terminal domain IE4872_PD00620 PF02056 Family 4 glycosyl hydrolase IE4872_PD00621 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD00622 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00623 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PD00623 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00624 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD00624 PF00005 ABC transporter IE4872_PD00625 PF02056 Family 4 glycosyl hydrolase IE4872_PD00625 PF11975 Family 4 glycosyl hydrolase C-terminal domain IE4872_PD00628 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00629 PF08402 TOBE domain IE4872_PD00629 PF00005 ABC transporter IE4872_PD00631 PF00491 Arginase family IE4872_PD00632 PF03466 LysR substrate binding domain IE4872_PD00632 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00633 PF00155 Aminotransferase class I and II IE4872_PD00635 PF02798 Glutathione S-transferase, N-terminal domain IE4872_PD00635 PF14497 Glutathione S-transferase, C-terminal domain IE4872_PD00637 PF04209 homogentisate 1,2-dioxygenase IE4872_PD00640 PF00118 TCP-1/cpn60 chaperonin family IE4872_PD00641 PF00166 Chaperonin 10 Kd subunit IE4872_PD00643 PF00248 Aldo/keto reductase family IE4872_PD00644 PF00248 Aldo/keto reductase family IE4872_PD00645 PF03466 LysR substrate binding domain IE4872_PD00645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00646 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IE4872_PD00647 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IE4872_PD00648 PF00361 Proton-conducting membrane transporter IE4872_PD00651 PF00361 Proton-conducting membrane transporter IE4872_PD00651 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus IE4872_PD00652 PF00361 Proton-conducting membrane transporter IE4872_PD00653 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IE4872_PD00654 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IE4872_PD00655 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IE4872_PD00656 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IE4872_PD00658 PF10531 SLBB domain IE4872_PD00658 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IE4872_PD00658 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IE4872_PD00659 PF12838 4Fe-4S dicluster domain IE4872_PD00659 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IE4872_PD00659 PF00384 Molybdopterin oxidoreductase IE4872_PD00659 PF01568 Molydopterin dinucleotide binding domain IE4872_PD00659 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IE4872_PD00660 PF01380 SIS domain IE4872_PD00660 PF00571 CBS domain IE4872_PD00661 PF12838 4Fe-4S dicluster domain IE4872_PD00662 PF00146 NADH dehydrogenase IE4872_PD00663 PF01037 Lrp/AsnC ligand binding domain IE4872_PD00664 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_PD00665 PF04955 HupE / UreJ protein IE4872_PD00666 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD00667 PF01547 Bacterial extracellular solute-binding protein IE4872_PD00668 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00669 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00670 PF03459 TOBE domain IE4872_PD00670 PF00005 ABC transporter IE4872_PD00670 PF17912 MalK OB fold domain IE4872_PD00672 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD00672 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD00673 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD00673 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD00674 PF00664 ABC transporter transmembrane region IE4872_PD00674 PF00005 ABC transporter IE4872_PD00675 PF00005 ABC transporter IE4872_PD00675 PF00664 ABC transporter transmembrane region IE4872_PD00679 PF00072 Response regulator receiver domain IE4872_PD00679 PF13426 PAS domain IE4872_PD00679 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD00680 PF02104 SURF1 family IE4872_PD00681 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IE4872_PD00682 PF00510 Cytochrome c oxidase subunit III IE4872_PD00683 PF00115 Cytochrome C and Quinol oxidase polypeptide I IE4872_PD00684 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IE4872_PD00684 PF06481 COX Aromatic Rich Motif IE4872_PD00686 PF00083 Sugar (and other) transporter IE4872_PD00686 PF07690 Major Facilitator Superfamily IE4872_PD00687 PF00027 Cyclic nucleotide-binding domain IE4872_PD00687 PF13302 Acetyltransferase (GNAT) domain IE4872_PD00688 PF03412 Peptidase C39 family IE4872_PD00688 PF00664 ABC transporter transmembrane region IE4872_PD00688 PF00005 ABC transporter IE4872_PD00690 PF00534 Glycosyl transferases group 1 IE4872_PD00692 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PD00692 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00693 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00694 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD00695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD00695 PF00005 ABC transporter IE4872_PD00696 PF02743 Cache domain IE4872_PD00696 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_PD00696 PF00672 HAMP domain IE4872_PD00698 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IE4872_PD00698 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IE4872_PD00698 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IE4872_PD00702 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_PD00702 PF00672 HAMP domain IE4872_PD00705 PF12706 Beta-lactamase superfamily domain IE4872_PD00707 PF13508 Acetyltransferase (GNAT) domain IE4872_PD00708 PF12399 Branched-chain amino acid ATP-binding cassette transporter IE4872_PD00708 PF00005 ABC transporter IE4872_PD00709 PF12399 Branched-chain amino acid ATP-binding cassette transporter IE4872_PD00709 PF00005 ABC transporter IE4872_PD00712 PF13458 Periplasmic binding protein IE4872_PD00713 PF10397 Adenylosuccinate lyase C-terminus IE4872_PD00713 PF00206 Lyase IE4872_PD00715 PF00775 Dioxygenase IE4872_PD00716 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IE4872_PD00716 PF00775 Dioxygenase IE4872_PD00717 PF02627 Carboxymuconolactone decarboxylase family IE4872_PD00718 PF12146 Serine aminopeptidase, S33 IE4872_PD00719 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00719 PF03466 LysR substrate binding domain IE4872_PD00721 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD00722 PF01593 Flavin containing amine oxidoreductase IE4872_PD00724 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00725 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00726 PF03459 TOBE domain IE4872_PD00726 PF00005 ABC transporter IE4872_PD00726 PF17912 MalK OB fold domain IE4872_PD00732 PF12833 Helix-turn-helix domain IE4872_PD00732 PF02311 AraC-like ligand binding domain IE4872_PD00734 PF00480 ROK family IE4872_PD00736 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00737 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00738 PF00005 ABC transporter IE4872_PD00738 PF17912 MalK OB fold domain IE4872_PD00739 PF02449 Beta-galactosidase IE4872_PD00739 PF08533 Beta-galactosidase C-terminal domain IE4872_PD00739 PF08532 Beta-galactosidase trimerisation domain IE4872_PD00741 PF01494 FAD binding domain IE4872_PD00742 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IE4872_PD00742 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IE4872_PD00742 PF02805 Metal binding domain of Ada IE4872_PD00742 PF12833 Helix-turn-helix domain IE4872_PD00743 PF09339 IclR helix-turn-helix domain IE4872_PD00743 PF01614 Bacterial transcriptional regulator IE4872_PD00744 PF01144 Coenzyme A transferase IE4872_PD00745 PF01144 Coenzyme A transferase IE4872_PD00746 PF00108 Thiolase, N-terminal domain IE4872_PD00746 PF02803 Thiolase, C-terminal domain IE4872_PD00748 PF00128 Alpha amylase, catalytic domain IE4872_PD00748 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IE4872_PD00750 PF01965 DJ-1/PfpI family IE4872_PD00752 PF13180 PDZ domain IE4872_PD00753 PF07715 TonB-dependent Receptor Plug Domain IE4872_PD00753 PF00593 TonB dependent receptor IE4872_PD00755 PF07690 Major Facilitator Superfamily IE4872_PD00756 PF06276 Ferric iron reductase FhuF-like transporter IE4872_PD00756 PF04183 IucA / IucC family IE4872_PD00757 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain IE4872_PD00758 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_PD00759 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IE4872_PD00760 PF02195 ParB-like nuclease domain IE4872_PD00761 PF03734 L,D-transpeptidase catalytic domain IE4872_PD00762 PF05951 Bacterial protein of unknown function (DUF882) IE4872_PD00765 PF02735 Ku70/Ku80 beta-barrel domain IE4872_PD00766 PF01068 ATP dependent DNA ligase domain IE4872_PD00766 PF13298 DNA polymerase Ligase (LigD) IE4872_PD00766 PF04679 ATP dependent DNA ligase C terminal region IE4872_PD00767 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD00767 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IE4872_PD00768 PF02735 Ku70/Ku80 beta-barrel domain IE4872_PD00769 PF02371 Transposase IS116/IS110/IS902 family IE4872_PD00769 PF01548 Transposase IE4872_PD00773 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD00773 PF13426 PAS domain IE4872_PD00773 PF00072 Response regulator receiver domain IE4872_PD00776 PF03167 Uracil DNA glycosylase superfamily IE4872_PD00777 PF00128 Alpha amylase, catalytic domain IE4872_PD00777 PF11941 Domain of unknown function (DUF3459) IE4872_PD00777 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IE4872_PD00778 PF13091 PLD-like domain IE4872_PD00780 PF01209 ubiE/COQ5 methyltransferase family IE4872_PD00781 PF01799 [2Fe-2S] binding domain IE4872_PD00781 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_PD00782 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_PD00787 PF00005 ABC transporter IE4872_PD00789 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD00789 PF00107 Zinc-binding dehydrogenase IE4872_PD00790 PF04828 Glutathione-dependent formaldehyde-activating enzyme IE4872_PD00793 PF07690 Major Facilitator Superfamily IE4872_PD00797 PF17912 MalK OB fold domain IE4872_PD00797 PF00005 ABC transporter IE4872_PD00798 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00799 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00800 PF13416 Bacterial extracellular solute-binding protein IE4872_PD00801 PF01757 Acyltransferase family IE4872_PD00802 PF00535 Glycosyl transferase family 2 IE4872_PD00803 PF00005 ABC transporter IE4872_PD00803 PF00664 ABC transporter transmembrane region IE4872_PD00805 PF07690 Major Facilitator Superfamily IE4872_PD00806 PF00313 'Cold-shock' DNA-binding domain IE4872_PD00811 PF00313 'Cold-shock' DNA-binding domain IE4872_PD00813 PF00487 Fatty acid desaturase IE4872_PD00814 PF01590 GAF domain IE4872_PD00814 PF00990 Diguanylate cyclase, GGDEF domain IE4872_PD00814 PF00360 Phytochrome region IE4872_PD00814 PF00563 EAL domain IE4872_PD00820 PF03631 Virulence factor BrkB IE4872_PD00825 PF01344 Kelch motif IE4872_PD00826 PF03551 Transcriptional regulator PadR-like family IE4872_PD00828 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD00828 PF03466 LysR substrate binding domain IE4872_PD00829 PF07690 Major Facilitator Superfamily IE4872_PD00838 PF01053 Cys/Met metabolism PLP-dependent enzyme IE4872_PD00840 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00841 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00842 PF00005 ABC transporter IE4872_PD00842 PF17912 MalK OB fold domain IE4872_PD00843 PF04273 Putative phosphatase (DUF442) IE4872_PD00843 PF00753 Metallo-beta-lactamase superfamily IE4872_PD00844 PF10417 C-terminal domain of 1-Cys peroxiredoxin IE4872_PD00844 PF00578 AhpC/TSA family IE4872_PD00845 PF12857 TOBE-like domain IE4872_PD00845 PF00005 ABC transporter IE4872_PD00846 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00847 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00849 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IE4872_PD00850 PF00486 Transcriptional regulatory protein, C terminal IE4872_PD00850 PF00072 Response regulator receiver domain IE4872_PD00852 PF02669 K+-transporting ATPase, c chain IE4872_PD00855 PF03814 Potassium-transporting ATPase A subunit IE4872_PD00858 PF13378 Enolase C-terminal domain-like IE4872_PD00858 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IE4872_PD00859 PF13378 Enolase C-terminal domain-like IE4872_PD00859 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IE4872_PD00860 PF00005 ABC transporter IE4872_PD00860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD00861 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PD00861 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00862 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00863 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD00865 PF07729 FCD domain IE4872_PD00865 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD00866 PF01370 NAD dependent epimerase/dehydratase family IE4872_PD00868 PF00701 Dihydrodipicolinate synthetase family IE4872_PD00869 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD00870 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00872 PF00005 ABC transporter IE4872_PD00872 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD00873 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD00873 PF00005 ABC transporter IE4872_PD00875 PF00107 Zinc-binding dehydrogenase IE4872_PD00875 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD00876 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IE4872_PD00876 PF00403 Heavy-metal-associated domain IE4872_PD00876 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PD00879 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PD00879 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_PD00879 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PD00884 PF12399 Branched-chain amino acid ATP-binding cassette transporter IE4872_PD00884 PF00005 ABC transporter IE4872_PD00885 PF00005 ABC transporter IE4872_PD00886 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD00887 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD00887 PF11862 Domain of unknown function (DUF3382) IE4872_PD00888 PF00732 GMC oxidoreductase IE4872_PD00888 PF05199 GMC oxidoreductase IE4872_PD00889 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_PD00889 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IE4872_PD00892 PF05336 L-rhamnose mutarotase IE4872_PD00893 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD00894 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD00895 PF00005 ABC transporter IE4872_PD00896 PF13407 Periplasmic binding protein domain IE4872_PD00897 PF00455 DeoR C terminal sensor domain IE4872_PD00897 PF08220 DeoR-like helix-turn-helix domain IE4872_PD00898 PF00596 Class II Aldolase and Adducin N-terminal domain IE4872_PD00899 PF01679 Proteolipid membrane potential modulator IE4872_PD00900 PF01261 Xylose isomerase-like TIM barrel IE4872_PD00901 PF02627 Carboxymuconolactone decarboxylase family IE4872_PD00902 PF12680 SnoaL-like domain IE4872_PD00902 PF08281 Sigma-70, region 4 IE4872_PD00902 PF04542 Sigma-70 region 2 IE4872_PD00903 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD00904 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00905 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PD00905 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00906 PF01979 Amidohydrolase family IE4872_PD00909 PF03841 L-seryl-tRNA selenium transferase IE4872_PD00910 PF00005 ABC transporter IE4872_PD00910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD00913 PF00440 Bacterial regulatory proteins, tetR family IE4872_PD00917 PF01425 Amidase IE4872_PD00921 PF03328 HpcH/HpaI aldolase/citrate lyase family IE4872_PD00928 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00929 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00930 PF08543 Phosphomethylpyrimidine kinase IE4872_PD00931 PF02581 Thiamine monophosphate synthase IE4872_PD00932 PF02110 Hydroxyethylthiazole kinase family IE4872_PD00932 PF02110 Hydroxyethylthiazole kinase family IE4872_PD00937 PF01370 NAD dependent epimerase/dehydratase family IE4872_PD00937 PF02911 Formyl transferase, C-terminal domain IE4872_PD00937 PF00551 Formyl transferase IE4872_PD00939 PF02397 Bacterial sugar transferase IE4872_PD00940 PF02719 Polysaccharide biosynthesis protein IE4872_PD00941 PF00534 Glycosyl transferases group 1 IE4872_PD00943 PF00534 Glycosyl transferases group 1 IE4872_PD00943 PF13439 Glycosyltransferase Family 4 IE4872_PD00946 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IE4872_PD00947 PF02585 GlcNAc-PI de-N-acetylase IE4872_PD00949 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IE4872_PD00950 PF01565 FAD binding domain IE4872_PD00950 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IE4872_PD00951 PF00535 Glycosyl transferase family 2 IE4872_PD00953 PF07690 Major Facilitator Superfamily IE4872_PD00957 PF08281 Sigma-70, region 4 IE4872_PD00957 PF04542 Sigma-70 region 2 IE4872_PD00958 PF00082 Subtilase family IE4872_PD00959 PF02733 Dak1 domain IE4872_PD00961 PF05524 PEP-utilising enzyme, N-terminal IE4872_PD00961 PF00391 PEP-utilising enzyme, mobile domain IE4872_PD00961 PF02896 PEP-utilising enzyme, TIM barrel domain IE4872_PD00962 PF00381 PTS HPr component phosphorylation site IE4872_PD00963 PF03610 PTS system fructose IIA component IE4872_PD00964 PF02734 DAK2 domain IE4872_PD00965 PF02734 DAK2 domain IE4872_PD00965 PF02733 Dak1 domain IE4872_PD00966 PF00005 ABC transporter IE4872_PD00966 PF08402 TOBE domain IE4872_PD00967 PF17912 MalK OB fold domain IE4872_PD00967 PF00005 ABC transporter IE4872_PD00969 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00970 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD00974 PF00005 ABC transporter IE4872_PD00975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IE4872_PD00977 PF08669 Glycine cleavage T-protein C-terminal barrel domain IE4872_PD00977 PF01571 Aminomethyltransferase folate-binding domain IE4872_PD00977 PF16350 FAD dependent oxidoreductase central domain IE4872_PD00977 PF01266 FAD dependent oxidoreductase IE4872_PD00979 PF03551 Transcriptional regulator PadR-like family IE4872_PD00983 PF00171 Aldehyde dehydrogenase family IE4872_PD00984 PF13426 PAS domain IE4872_PD00984 PF02954 Bacterial regulatory protein, Fis family IE4872_PD00984 PF00158 Sigma-54 interaction domain IE4872_PD00987 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_PD00988 PF00360 Phytochrome region IE4872_PD00988 PF00990 Diguanylate cyclase, GGDEF domain IE4872_PD00988 PF01590 GAF domain IE4872_PD00988 PF00563 EAL domain IE4872_PD00991 PF00578 AhpC/TSA family IE4872_PD00991 PF17991 Thioredoxin like C-terminal domain IE4872_PD00991 PF02683 Cytochrome C biogenesis protein transmembrane region IE4872_PD00993 PF00486 Transcriptional regulatory protein, C terminal IE4872_PD00993 PF00072 Response regulator receiver domain IE4872_PD00994 PF00512 His Kinase A (phospho-acceptor) domain IE4872_PD00994 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD00994 PF00672 HAMP domain IE4872_PD01000 PF01209 ubiE/COQ5 methyltransferase family IE4872_PD01002 PF00563 EAL domain IE4872_PD01002 PF00990 Diguanylate cyclase, GGDEF domain IE4872_PD01002 PF08447 PAS fold IE4872_PD01002 PF08448 PAS fold IE4872_PD01004 PF07238 PilZ domain IE4872_PD01004 PF00535 Glycosyl transferase family 2 IE4872_PD01004 PF03552 Cellulose synthase IE4872_PD01006 PF01270 Glycosyl hydrolases family 8 IE4872_PD01008 PF00990 Diguanylate cyclase, GGDEF domain IE4872_PD01008 PF07694 5TMR of 5TMR-LYT IE4872_PD01009 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_PD01009 PF02785 Biotin carboxylase C-terminal domain IE4872_PD01009 PF00364 Biotin-requiring enzyme IE4872_PD01009 PF00289 Biotin carboxylase, N-terminal domain IE4872_PD01010 PF02682 Carboxyltransferase domain, subdomain C and D IE4872_PD01011 PF07286 Protein of unknown function (DUF1445) IE4872_PD01012 PF03746 LamB/YcsF family IE4872_PD01013 PF01566 Natural resistance-associated macrophage protein IE4872_PD01020 PF00196 Bacterial regulatory proteins, luxR family IE4872_PD01020 PF00072 Response regulator receiver domain IE4872_PD01021 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD01021 PF07730 Histidine kinase IE4872_PD01021 PF00672 HAMP domain IE4872_PD01023 PF00672 HAMP domain IE4872_PD01023 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD01023 PF00512 His Kinase A (phospho-acceptor) domain IE4872_PD01025 PF00563 EAL domain IE4872_PD01025 PF01590 GAF domain IE4872_PD01025 PF00990 Diguanylate cyclase, GGDEF domain IE4872_PD01025 PF00360 Phytochrome region IE4872_PD01027 PF03775 Septum formation inhibitor MinC, C-terminal domain IE4872_PD01028 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IE4872_PD01029 PF03776 Septum formation topological specificity factor MinE IE4872_PD01034 PF13936 Helix-turn-helix domain IE4872_PD01034 PF00665 Integrase core domain IE4872_PD01041 PF04304 Protein of unknown function (DUF454) IE4872_PD01045 PF00722 Glycosyl hydrolases family 16 IE4872_PD01045 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IE4872_PD01046 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IE4872_PD01046 PF00529 HlyD membrane-fusion protein of T1SS IE4872_PD01047 PF00664 ABC transporter transmembrane region IE4872_PD01047 PF00005 ABC transporter IE4872_PD01051 PF00459 Inositol monophosphatase family IE4872_PD01053 PF00005 ABC transporter IE4872_PD01053 PF08402 TOBE domain IE4872_PD01054 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01055 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01061 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01061 PF03466 LysR substrate binding domain IE4872_PD01062 PF00248 Aldo/keto reductase family IE4872_PD01063 PF00005 ABC transporter IE4872_PD01063 PF03459 TOBE domain IE4872_PD01063 PF17912 MalK OB fold domain IE4872_PD01064 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01065 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01066 PF13416 Bacterial extracellular solute-binding protein IE4872_PD01068 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD01069 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01072 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01073 PF07690 Major Facilitator Superfamily IE4872_PD01075 PF00072 Response regulator receiver domain IE4872_PD01076 PF01835 MG2 domain IE4872_PD01076 PF17962 Bacterial macroglobulin domain 6 IE4872_PD01076 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain IE4872_PD01076 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain IE4872_PD01076 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain IE4872_PD01076 PF07703 Alpha-2-macroglobulin bait region domain IE4872_PD01076 PF00207 Alpha-2-macroglobulin family IE4872_PD01076 PF11974 Bacterial alpha-2-macroglobulin MG3 domain IE4872_PD01077 PF06832 Penicillin-Binding Protein C-terminus Family IE4872_PD01077 PF00912 Transglycosylase IE4872_PD01077 PF00905 Penicillin binding protein transpeptidase domain IE4872_PD01078 PF00128 Alpha amylase, catalytic domain IE4872_PD01079 PF04945 YHS domain IE4872_PD01080 PF09278 MerR, DNA binding IE4872_PD01080 PF00376 MerR family regulatory protein IE4872_PD01081 PF04542 Sigma-70 region 2 IE4872_PD01081 PF08281 Sigma-70, region 4 IE4872_PD01083 PF01027 Inhibitor of apoptosis-promoting Bax1 IE4872_PD01084 PF11972 HTH DNA binding domain IE4872_PD01084 PF07756 Protein of unknown function (DUF1612) IE4872_PD01085 PF07702 UTRA domain IE4872_PD01085 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01087 PF01979 Amidohydrolase family IE4872_PD01088 PF00221 Aromatic amino acid lyase IE4872_PD01089 PF17391 Urocanase N-terminal domain IE4872_PD01089 PF01175 Urocanase Rossmann-like domain IE4872_PD01089 PF17392 Urocanase C-terminal domain IE4872_PD01090 PF05962 HutD IE4872_PD01091 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IE4872_PD01092 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IE4872_PD01093 PF02571 Precorrin-6x reductase CbiJ/CobK IE4872_PD01094 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IE4872_PD01095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IE4872_PD01096 PF02570 Precorrin-8X methylmutase IE4872_PD01097 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IE4872_PD01098 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IE4872_PD01100 PF00701 Dihydrodipicolinate synthetase family IE4872_PD01102 PF00005 ABC transporter IE4872_PD01102 PF00664 ABC transporter transmembrane region IE4872_PD01103 PF00005 ABC transporter IE4872_PD01103 PF00664 ABC transporter transmembrane region IE4872_PD01104 PF01654 Cytochrome bd terminal oxidase subunit I IE4872_PD01105 PF02322 Cytochrome bd terminal oxidase subunit II IE4872_PD01106 PF08173 Membrane bound YbgT-like protein IE4872_PD01108 PF03741 Integral membrane protein TerC family IE4872_PD01109 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01110 PF02798 Glutathione S-transferase, N-terminal domain IE4872_PD01110 PF00043 Glutathione S-transferase, C-terminal domain IE4872_PD01112 PF01032 FecCD transport family IE4872_PD01114 PF00005 ABC transporter IE4872_PD01115 PF00593 TonB dependent receptor IE4872_PD01115 PF07715 TonB-dependent Receptor Plug Domain IE4872_PD01116 PF14525 AraC-binding-like domain IE4872_PD01116 PF12833 Helix-turn-helix domain IE4872_PD01117 PF04909 Amidohydrolase IE4872_PD01118 PF04073 Aminoacyl-tRNA editing domain IE4872_PD01120 PF13378 Enolase C-terminal domain-like IE4872_PD01120 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IE4872_PD01125 PF03976 Polyphosphate kinase 2 (PPK2) IE4872_PD01127 PF00293 NUDIX domain IE4872_PD01127 PF13344 Haloacid dehalogenase-like hydrolase IE4872_PD01129 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01131 PF00005 ABC transporter IE4872_PD01132 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD01133 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD01134 PF01261 Xylose isomerase-like TIM barrel IE4872_PD01138 PF00912 Transglycosylase IE4872_PD01138 PF00905 Penicillin binding protein transpeptidase domain IE4872_PD01138 PF17092 Penicillin-binding protein OB-like domain IE4872_PD01140 PF12704 MacB-like periplasmic core domain IE4872_PD01140 PF02687 FtsX-like permease family IE4872_PD01142 PF00440 Bacterial regulatory proteins, tetR family IE4872_PD01145 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01146 PF08402 TOBE domain IE4872_PD01146 PF00005 ABC transporter IE4872_PD01147 PF03009 Glycerophosphoryl diester phosphodiesterase family IE4872_PD01148 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01149 PF00459 Inositol monophosphatase family IE4872_PD01151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01151 PF03466 LysR substrate binding domain IE4872_PD01152 PF02798 Glutathione S-transferase, N-terminal domain IE4872_PD01154 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_PD01155 PF00892 EamA-like transporter family IE4872_PD01157 PF13660 Domain of unknown function (DUF4147) IE4872_PD01157 PF05161 MOFRL family IE4872_PD01159 PF00106 short chain dehydrogenase IE4872_PD01160 PF00108 Thiolase, N-terminal domain IE4872_PD01160 PF02803 Thiolase, C-terminal domain IE4872_PD01161 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PD01161 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_PD01161 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PD01162 PF00676 Dehydrogenase E1 component IE4872_PD01162 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal IE4872_PD01163 PF02780 Transketolase, C-terminal domain IE4872_PD01163 PF02779 Transketolase, pyrimidine binding domain IE4872_PD01164 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IE4872_PD01164 PF02817 e3 binding domain IE4872_PD01164 PF00364 Biotin-requiring enzyme IE4872_PD01165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IE4872_PD01165 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PD01166 PF02581 Thiamine monophosphate synthase IE4872_PD01167 PF05690 Thiazole biosynthesis protein ThiG IE4872_PD01169 PF01266 FAD dependent oxidoreductase IE4872_PD01170 PF01964 Radical SAM ThiC family IE4872_PD01170 PF13667 ThiC-associated domain IE4872_PD01172 PF04962 KduI/IolB family IE4872_PD01173 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01173 PF07729 FCD domain IE4872_PD01175 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01177 PF13416 Bacterial extracellular solute-binding protein IE4872_PD01179 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01180 PF00005 ABC transporter IE4872_PD01182 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01182 PF07729 FCD domain IE4872_PD01183 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD01184 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01188 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD01188 PF00005 ABC transporter IE4872_PD01200 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IE4872_PD01203 PF01757 Acyltransferase family IE4872_PD01204 PF01757 Acyltransferase family IE4872_PD01206 PF00149 Calcineurin-like phosphoesterase IE4872_PD01207 PF00202 Aminotransferase class-III IE4872_PD01209 PF09940 Domain of unknown function (DUF2172) IE4872_PD01209 PF16254 Domain of unknown function (DUF4910) IE4872_PD01209 PF16221 winged helix-turn-helix IE4872_PD01210 PF00106 short chain dehydrogenase IE4872_PD01211 PF00722 Glycosyl hydrolases family 16 IE4872_PD01213 PF00535 Glycosyl transferase family 2 IE4872_PD01214 PF13807 G-rich domain on putative tyrosine kinase IE4872_PD01214 PF02706 Chain length determinant protein IE4872_PD01214 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IE4872_PD01216 PF00483 Nucleotidyl transferase IE4872_PD01217 PF02397 Bacterial sugar transferase IE4872_PD01218 PF02563 Polysaccharide biosynthesis/export protein IE4872_PD01221 PF01501 Glycosyl transferase family 8 IE4872_PD01221 PF08437 Glycosyl transferase family 8 C-terminal IE4872_PD01222 PF01943 Polysaccharide biosynthesis protein IE4872_PD01224 PF02397 Bacterial sugar transferase IE4872_PD01225 PF11089 Exopolysaccharide production repressor IE4872_PD01226 PF01266 FAD dependent oxidoreductase IE4872_PD01227 PF05199 GMC oxidoreductase IE4872_PD01227 PF00732 GMC oxidoreductase IE4872_PD01229 PF13180 PDZ domain IE4872_PD01232 PF00378 Enoyl-CoA hydratase/isomerase IE4872_PD01233 PF00682 HMGL-like IE4872_PD01234 PF00364 Biotin-requiring enzyme IE4872_PD01234 PF02785 Biotin carboxylase C-terminal domain IE4872_PD01234 PF00289 Biotin carboxylase, N-terminal domain IE4872_PD01234 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_PD01235 PF01039 Carboxyl transferase domain IE4872_PD01236 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PD01236 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_PD01236 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PD01238 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IE4872_PD01238 PF11890 Domain of unknown function (DUF3410) IE4872_PD01238 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_PD01241 PF00011 Hsp20/alpha crystallin family IE4872_PD01242 PF00166 Chaperonin 10 Kd subunit IE4872_PD01243 PF00118 TCP-1/cpn60 chaperonin family IE4872_PD01246 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01247 PF01547 Bacterial extracellular solute-binding protein IE4872_PD01248 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01249 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01250 PF07944 Beta-L-arabinofuranosidase, GH127 IE4872_PD01251 PF17912 MalK OB fold domain IE4872_PD01251 PF00005 ABC transporter IE4872_PD01254 PF00296 Luciferase-like monooxygenase IE4872_PD01255 PF00005 ABC transporter IE4872_PD01255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD01257 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01258 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD01264 PF00118 TCP-1/cpn60 chaperonin family IE4872_PD01265 PF00155 Aminotransferase class I and II IE4872_PD01266 PF02630 SCO1/SenC IE4872_PD01270 PF00115 Cytochrome C and Quinol oxidase polypeptide I IE4872_PD01275 PF10518 TAT (twin-arginine translocation) pathway signal sequence IE4872_PD01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PD01275 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding IE4872_PD01280 PF01578 Cytochrome C assembly protein IE4872_PD01280 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IE4872_PD01281 PF00005 ABC transporter IE4872_PD01282 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD01285 PF12833 Helix-turn-helix domain IE4872_PD01285 PF14525 AraC-binding-like domain IE4872_PD01286 PF00672 HAMP domain IE4872_PD01286 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_PD01288 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01288 PF03466 LysR substrate binding domain IE4872_PD01289 PF01209 ubiE/COQ5 methyltransferase family IE4872_PD01292 PF01032 FecCD transport family IE4872_PD01293 PF00005 ABC transporter IE4872_PD01296 PF00313 'Cold-shock' DNA-binding domain IE4872_PD01309 PF10417 C-terminal domain of 1-Cys peroxiredoxin IE4872_PD01309 PF00578 AhpC/TSA family IE4872_PD01311 PF03358 NADPH-dependent FMN reductase IE4872_PD01312 PF00571 CBS domain IE4872_PD01312 PF03471 Transporter associated domain IE4872_PD01312 PF01595 Cyclin M transmembrane N-terminal domain IE4872_PD01313 PF07729 FCD domain IE4872_PD01313 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01314 PF07005 Sugar-binding N-terminal domain IE4872_PD01314 PF17042 Nucleotide-binding C-terminal domain IE4872_PD01315 PF00005 ABC transporter IE4872_PD01315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD01316 PF00005 ABC transporter IE4872_PD01316 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD01317 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PD01317 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01318 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01319 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD01320 PF00701 Dihydrodipicolinate synthetase family IE4872_PD01322 PF00465 Iron-containing alcohol dehydrogenase IE4872_PD01323 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IE4872_PD01324 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD01324 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD01325 PF03861 ANTAR domain IE4872_PD01325 PF08376 Nitrate and nitrite sensing IE4872_PD01328 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01329 PF00005 ABC transporter IE4872_PD01330 PF08376 Nitrate and nitrite sensing IE4872_PD01330 PF03861 ANTAR domain IE4872_PD01331 PF00005 ABC transporter IE4872_PD01332 PF07690 Major Facilitator Superfamily IE4872_PD01333 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PD01333 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IE4872_PD01333 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IE4872_PD01333 PF04324 BFD-like [2Fe-2S] binding domain IE4872_PD01333 PF18267 Rubredoxin NAD+ reductase C-terminal domain IE4872_PD01335 PF04324 BFD-like [2Fe-2S] binding domain IE4872_PD01335 PF00384 Molybdopterin oxidoreductase IE4872_PD01335 PF01568 Molydopterin dinucleotide binding domain IE4872_PD01335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IE4872_PD01336 PF10414 Sirohaem synthase dimerisation region IE4872_PD01336 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IE4872_PD01336 PF14824 Sirohaem biosynthesis protein central IE4872_PD01340 PF03466 LysR substrate binding domain IE4872_PD01340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01341 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD01342 PF10397 Adenylosuccinate lyase C-terminus IE4872_PD01342 PF00206 Lyase IE4872_PD01343 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01344 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PD01344 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01345 PF00005 ABC transporter IE4872_PD01345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD01346 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD01346 PF00005 ABC transporter IE4872_PD01349 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD01349 PF00005 ABC transporter IE4872_PD01350 PF00005 ABC transporter IE4872_PD01350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD01351 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01351 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PD01352 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01353 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD01354 PF07729 FCD domain IE4872_PD01354 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01355 PF03786 D-mannonate dehydratase (UxuA) IE4872_PD01356 PF00701 Dihydrodipicolinate synthetase family IE4872_PD01357 PF02449 Beta-galactosidase IE4872_PD01357 PF08532 Beta-galactosidase trimerisation domain IE4872_PD01357 PF08533 Beta-galactosidase C-terminal domain IE4872_PD01358 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IE4872_PD01358 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_PD01359 PF01261 Xylose isomerase-like TIM barrel IE4872_PD01360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD01360 PF00005 ABC transporter IE4872_PD01361 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PD01361 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01362 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01363 PF02449 Beta-galactosidase IE4872_PD01363 PF08532 Beta-galactosidase trimerisation domain IE4872_PD01363 PF08533 Beta-galactosidase C-terminal domain IE4872_PD01364 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD01365 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01366 PF00375 Sodium:dicarboxylate symporter family IE4872_PD01367 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD01367 PF00512 His Kinase A (phospho-acceptor) domain IE4872_PD01368 PF00158 Sigma-54 interaction domain IE4872_PD01368 PF00072 Response regulator receiver domain IE4872_PD01368 PF02954 Bacterial regulatory protein, Fis family IE4872_PD01370 PF13407 Periplasmic binding protein domain IE4872_PD01371 PF00005 ABC transporter IE4872_PD01372 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD01373 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD01374 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IE4872_PD01374 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IE4872_PD01375 PF00202 Aminotransferase class-III IE4872_PD01377 PF00155 Aminotransferase class I and II IE4872_PD01378 PF04055 Radical SAM superfamily IE4872_PD01378 PF06968 Biotin and Thiamin Synthesis associated domain IE4872_PD01380 PF00005 ABC transporter IE4872_PD01380 PF00664 ABC transporter transmembrane region IE4872_PD01382 PF00005 ABC transporter IE4872_PD01384 PF01497 Periplasmic binding protein IE4872_PD01385 PF01032 FecCD transport family IE4872_PD01386 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IE4872_PD01386 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IE4872_PD01387 PF00106 short chain dehydrogenase IE4872_PD01388 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD01389 PF00005 ABC transporter IE4872_PD01390 PF13407 Periplasmic binding protein domain IE4872_PD01394 PF00005 ABC transporter IE4872_PD01394 PF00664 ABC transporter transmembrane region IE4872_PD01395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IE4872_PD01395 PF00529 HlyD membrane-fusion protein of T1SS IE4872_PD01396 PF01527 Transposase IE4872_PD01397 PF00072 Response regulator receiver domain IE4872_PD01397 PF00196 Bacterial regulatory proteins, luxR family IE4872_PD01399 PF02548 Ketopantoate hydroxymethyltransferase IE4872_PD01400 PF02569 Pantoate-beta-alanine ligase IE4872_PD01401 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IE4872_PD01401 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_PD01402 PF00596 Class II Aldolase and Adducin N-terminal domain IE4872_PD01403 PF07005 Sugar-binding N-terminal domain IE4872_PD01403 PF17042 Nucleotide-binding C-terminal domain IE4872_PD01404 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IE4872_PD01404 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IE4872_PD01405 PF01261 Xylose isomerase-like TIM barrel IE4872_PD01406 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IE4872_PD01406 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01408 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01409 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01411 PF00005 ABC transporter IE4872_PD01411 PF03459 TOBE domain IE4872_PD01411 PF17912 MalK OB fold domain IE4872_PD01413 PF01370 NAD dependent epimerase/dehydratase family IE4872_PD01414 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01414 PF07729 FCD domain IE4872_PD01415 PF00571 CBS domain IE4872_PD01417 PF01161 Phosphatidylethanolamine-binding protein IE4872_PD01420 PF03437 BtpA family IE4872_PD01421 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IE4872_PD01421 PF00294 pfkB family carbohydrate kinase IE4872_PD01423 PF02126 Phosphotriesterase family IE4872_PD01424 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD01425 PF00005 ABC transporter IE4872_PD01427 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01429 PF00149 Calcineurin-like phosphoesterase IE4872_PD01434 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD01435 PF00005 ABC transporter IE4872_PD01438 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01438 PF07729 FCD domain IE4872_PD01439 PF00474 Sodium:solute symporter family IE4872_PD01442 PF00072 Response regulator receiver domain IE4872_PD01442 PF00196 Bacterial regulatory proteins, luxR family IE4872_PD01443 PF17200 Single Cache domain 2 IE4872_PD01443 PF07730 Histidine kinase IE4872_PD01445 PF00072 Response regulator receiver domain IE4872_PD01445 PF00158 Sigma-54 interaction domain IE4872_PD01445 PF02954 Bacterial regulatory protein, Fis family IE4872_PD01446 PF00535 Glycosyl transferase family 2 IE4872_PD01447 PF04055 Radical SAM superfamily IE4872_PD01447 PF13186 Iron-sulfur cluster-binding domain IE4872_PD01448 PF03070 TENA/THI-4/PQQC family IE4872_PD01449 PF12706 Beta-lactamase superfamily domain IE4872_PD01453 PF13360 PQQ-like domain IE4872_PD01461 PF00034 Cytochrome c IE4872_PD01462 PF00834 Ribulose-phosphate 3 epimerase family IE4872_PD01463 PF17866 AAA lid domain IE4872_PD01463 PF00004 ATPase family associated with various cellular activities (AAA) IE4872_PD01464 PF00101 Ribulose bisphosphate carboxylase, small chain IE4872_PD01465 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain IE4872_PD01465 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain IE4872_PD01466 PF01116 Fructose-bisphosphate aldolase class-II IE4872_PD01467 PF00456 Transketolase, thiamine diphosphate binding domain IE4872_PD01467 PF02779 Transketolase, pyrimidine binding domain IE4872_PD01467 PF02780 Transketolase, C-terminal domain IE4872_PD01468 PF00485 Phosphoribulokinase / Uridine kinase family IE4872_PD01469 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IE4872_PD01470 PF03466 LysR substrate binding domain IE4872_PD01470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01471 PF01493 GXGXG motif IE4872_PD01472 PF02741 FTR, proximal lobe IE4872_PD01472 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase IE4872_PD01473 PF07969 Amidohydrolase family IE4872_PD01475 PF01329 Pterin 4 alpha carbinolamine dehydratase IE4872_PD01477 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal IE4872_PD01479 PF02289 Cyclohydrolase (MCH) IE4872_PD01480 PF18030 RimK PreATP-grasp domain IE4872_PD01480 PF08443 RimK-like ATP-grasp domain IE4872_PD01482 PF08714 Formaldehyde-activating enzyme (Fae) IE4872_PD01483 PF00977 Histidine biosynthesis protein IE4872_PD01489 PF04476 4-HFC-P synthase IE4872_PD01493 PF00005 ABC transporter IE4872_PD01497 PF02566 OsmC-like protein IE4872_PD01498 PF13419 Haloacid dehalogenase-like hydrolase IE4872_PD01499 PF03009 Glycerophosphoryl diester phosphodiesterase family IE4872_PD01500 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01501 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01502 PF13416 Bacterial extracellular solute-binding protein IE4872_PD01503 PF00005 ABC transporter IE4872_PD01503 PF08402 TOBE domain IE4872_PD01512 PF01556 DnaJ C terminal domain IE4872_PD01512 PF00226 DnaJ domain IE4872_PD01515 PF00005 ABC transporter IE4872_PD01516 PF01032 FecCD transport family IE4872_PD01517 PF01032 FecCD transport family IE4872_PD01519 PF07690 Major Facilitator Superfamily IE4872_PD01525 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IE4872_PD01525 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IE4872_PD01526 PF03466 LysR substrate binding domain IE4872_PD01526 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01529 PF00106 short chain dehydrogenase IE4872_PD01530 PF02566 OsmC-like protein IE4872_PD01533 PF03466 LysR substrate binding domain IE4872_PD01533 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01534 PF00248 Aldo/keto reductase family IE4872_PD01539 PF01037 Lrp/AsnC ligand binding domain IE4872_PD01541 PF14850 DNA-binding domain of Proline dehydrogenase IE4872_PD01541 PF01619 Proline dehydrogenase IE4872_PD01541 PF00171 Aldehyde dehydrogenase family IE4872_PD01541 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IE4872_PD01543 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01543 PF03466 LysR substrate binding domain IE4872_PD01545 PF02805 Metal binding domain of Ada IE4872_PD01545 PF12833 Helix-turn-helix domain IE4872_PD01545 PF00730 HhH-GPD superfamily base excision DNA repair protein IE4872_PD01545 PF06029 AlkA N-terminal domain IE4872_PD01546 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01547 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01548 PF00005 ABC transporter IE4872_PD01548 PF00571 CBS domain IE4872_PD01551 PF00171 Aldehyde dehydrogenase family IE4872_PD01552 PF00701 Dihydrodipicolinate synthetase family IE4872_PD01553 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01553 PF07729 FCD domain IE4872_PD01554 PF00355 Rieske [2Fe-2S] domain IE4872_PD01554 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IE4872_PD01555 PF00970 Oxidoreductase FAD-binding domain IE4872_PD01555 PF00175 Oxidoreductase NAD-binding domain IE4872_PD01555 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_PD01556 PF00557 Metallopeptidase family M24 IE4872_PD01557 PF01381 Helix-turn-helix IE4872_PD01557 PF07883 Cupin domain IE4872_PD01559 PF01047 MarR family IE4872_PD01562 PF00144 Beta-lactamase IE4872_PD01563 PF00107 Zinc-binding dehydrogenase IE4872_PD01563 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD01565 PF00766 Electron transfer flavoprotein FAD-binding domain IE4872_PD01565 PF01012 Electron transfer flavoprotein domain IE4872_PD01566 PF01012 Electron transfer flavoprotein domain IE4872_PD01567 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IE4872_PD01569 PF14748 Pyrroline-5-carboxylate reductase dimerisation IE4872_PD01569 PF03807 NADP oxidoreductase coenzyme F420-dependent IE4872_PD01571 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01572 PF00005 ABC transporter IE4872_PD01572 PF00571 CBS domain IE4872_PD01575 PF02547 Queuosine biosynthesis protein IE4872_PD01577 PF09278 MerR, DNA binding IE4872_PD01577 PF00376 MerR family regulatory protein IE4872_PD01578 PF00239 Resolvase, N terminal domain IE4872_PD01579 PF00239 Resolvase, N terminal domain IE4872_PD01582 PF07729 FCD domain IE4872_PD01582 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01584 PF13193 AMP-binding enzyme C-terminal domain IE4872_PD01584 PF00501 AMP-binding enzyme IE4872_PD01588 PF00701 Dihydrodipicolinate synthetase family IE4872_PD01590 PF01810 LysE type translocator IE4872_PD01591 PF03466 LysR substrate binding domain IE4872_PD01591 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01592 PF04221 RelB antitoxin IE4872_PD01594 PF01970 Tripartite tricarboxylate transporter TctA family IE4872_PD01597 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IE4872_PD01598 PF07729 FCD domain IE4872_PD01598 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01599 PF00672 HAMP domain IE4872_PD01599 PF00512 His Kinase A (phospho-acceptor) domain IE4872_PD01599 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD01600 PF00072 Response regulator receiver domain IE4872_PD01600 PF00486 Transcriptional regulatory protein, C terminal IE4872_PD01614 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD01614 PF00107 Zinc-binding dehydrogenase IE4872_PD01620 PF01168 Alanine racemase, N-terminal domain IE4872_PD01620 PF14031 Putative serine dehydratase domain IE4872_PD01621 PF07171 MlrC C-terminus IE4872_PD01621 PF07364 Metallopeptidase family M81 IE4872_PD01624 PF01380 SIS domain IE4872_PD01624 PF01418 Helix-turn-helix domain, rpiR family IE4872_PD01626 PF00728 Glycosyl hydrolase family 20, catalytic domain IE4872_PD01626 PF02838 Glycosyl hydrolase family 20, domain 2 IE4872_PD01629 PF03869 Arc-like DNA binding domain IE4872_PD01635 PF08402 TOBE domain IE4872_PD01635 PF00005 ABC transporter IE4872_PD01636 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01637 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01639 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01642 PF00753 Metallo-beta-lactamase superfamily IE4872_PD01643 PF01042 Endoribonuclease L-PSP IE4872_PD01646 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IE4872_PD01646 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IE4872_PD01647 PF03737 Aldolase/RraA IE4872_PD01648 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01648 PF03466 LysR substrate binding domain IE4872_PD01651 PF03358 NADPH-dependent FMN reductase IE4872_PD01652 PF03551 Transcriptional regulator PadR-like family IE4872_PD01654 PF03466 LysR substrate binding domain IE4872_PD01654 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01655 PF00248 Aldo/keto reductase family IE4872_PD01659 PF01625 Peptide methionine sulfoxide reductase IE4872_PD01660 PF01641 SelR domain IE4872_PD01661 PF03466 LysR substrate binding domain IE4872_PD01661 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01662 PF01263 Aldose 1-epimerase IE4872_PD01663 PF01209 ubiE/COQ5 methyltransferase family IE4872_PD01664 PF01699 Sodium/calcium exchanger protein IE4872_PD01667 PF12833 Helix-turn-helix domain IE4872_PD01668 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01668 PF00155 Aminotransferase class I and II IE4872_PD01669 PF09084 NMT1/THI5 like IE4872_PD01671 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01672 PF00005 ABC transporter IE4872_PD01673 PF07687 Peptidase dimerisation domain IE4872_PD01673 PF01546 Peptidase family M20/M25/M40 IE4872_PD01674 PF01183 Glycosyl hydrolases family 25 IE4872_PD01680 PF01527 Transposase IE4872_PD01683 PF13005 zinc-finger binding domain of transposase IS66 IE4872_PD01683 PF03050 Transposase IS66 family IE4872_PD01683 PF13817 IS66 C-terminal element IE4872_PD01683 PF13007 Transposase C of IS166 homeodomain IE4872_PD01687 PF13333 Integrase core domain IE4872_PD01687 PF13276 HTH-like domain IE4872_PD01687 PF00665 Integrase core domain IE4872_PD01699 PF01223 DNA/RNA non-specific endonuclease IE4872_PD01703 PF07756 Protein of unknown function (DUF1612) IE4872_PD01703 PF11972 HTH DNA binding domain IE4872_PD01704 PF02811 PHP domain IE4872_PD01704 PF14579 Helix-hairpin-helix motif IE4872_PD01704 PF07733 Bacterial DNA polymerase III alpha NTPase domain IE4872_PD01704 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IE4872_PD01711 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IE4872_PD01712 PF01594 AI-2E family transporter IE4872_PD01715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IE4872_PD01715 PF02203 Tar ligand binding domain homologue IE4872_PD01715 PF00672 HAMP domain IE4872_PD01721 PF00529 HlyD membrane-fusion protein of T1SS IE4872_PD01721 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IE4872_PD01722 PF00916 Sulfate permease family IE4872_PD01722 PF01740 STAS domain IE4872_PD01723 PF03976 Polyphosphate kinase 2 (PPK2) IE4872_PD01724 PF01594 AI-2E family transporter IE4872_PD01726 PF01699 Sodium/calcium exchanger protein IE4872_PD01729 PF13545 Crp-like helix-turn-helix domain IE4872_PD01729 PF00027 Cyclic nucleotide-binding domain IE4872_PD01734 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IE4872_PD01734 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IE4872_PD01737 PF00115 Cytochrome C and Quinol oxidase polypeptide I IE4872_PD01740 PF00924 Mechanosensitive ion channel IE4872_PD01754 PF00355 Rieske [2Fe-2S] domain IE4872_PD01755 PF03449 Transcription elongation factor, N-terminal IE4872_PD01755 PF01272 Transcription elongation factor, GreA/GreB, C-term IE4872_PD01759 PF03466 LysR substrate binding domain IE4872_PD01759 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01767 PF01042 Endoribonuclease L-PSP IE4872_PD01769 PF02798 Glutathione S-transferase, N-terminal domain IE4872_PD01769 PF00043 Glutathione S-transferase, C-terminal domain IE4872_PD01772 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01772 PF03466 LysR substrate binding domain IE4872_PD01774 PF12697 Alpha/beta hydrolase family IE4872_PD01776 PF01047 MarR family IE4872_PD01777 PF00990 Diguanylate cyclase, GGDEF domain IE4872_PD01777 PF03707 Bacterial signalling protein N terminal repeat IE4872_PD01777 PF13188 PAS domain IE4872_PD01777 PF00563 EAL domain IE4872_PD01785 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01793 PF04198 Putative sugar-binding domain IE4872_PD01794 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IE4872_PD01794 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IE4872_PD01795 PF02779 Transketolase, pyrimidine binding domain IE4872_PD01795 PF02780 Transketolase, C-terminal domain IE4872_PD01796 PF00456 Transketolase, thiamine diphosphate binding domain IE4872_PD01797 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD01798 PF13407 Periplasmic binding protein domain IE4872_PD01799 PF00005 ABC transporter IE4872_PD01802 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IE4872_PD01807 PF08447 PAS fold IE4872_PD01807 PF07536 HWE histidine kinase IE4872_PD01807 PF13426 PAS domain IE4872_PD01813 PF03737 Aldolase/RraA IE4872_PD01814 PF00920 Dehydratase family IE4872_PD01815 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01816 PF00005 ABC transporter IE4872_PD01818 PF07729 FCD domain IE4872_PD01818 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01819 PF00005 ABC transporter IE4872_PD01819 PF08402 TOBE domain IE4872_PD01820 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01821 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01824 PF00171 Aldehyde dehydrogenase family IE4872_PD01825 PF00296 Luciferase-like monooxygenase IE4872_PD01826 PF01613 Flavin reductase like domain IE4872_PD01827 PF12697 Alpha/beta hydrolase family IE4872_PD01830 PF07729 FCD domain IE4872_PD01830 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01831 PF00551 Formyl transferase IE4872_PD01832 PF00120 Glutamine synthetase, catalytic domain IE4872_PD01833 PF01645 Conserved region in glutamate synthase IE4872_PD01834 PF01493 GXGXG motif IE4872_PD01837 PF12833 Helix-turn-helix domain IE4872_PD01837 PF01965 DJ-1/PfpI family IE4872_PD01838 PF01266 FAD dependent oxidoreductase IE4872_PD01839 PF04267 Sarcosine oxidase, delta subunit family IE4872_PD01840 PF01571 Aminomethyltransferase folate-binding domain IE4872_PD01840 PF17806 Sarcosine oxidase A3 domain IE4872_PD01840 PF08669 Glycine cleavage T-protein C-terminal barrel domain IE4872_PD01840 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PD01845 PF00884 Sulfatase IE4872_PD01845 PF08019 Phosphoethanolamine transferase EptA/EptB IE4872_PD01846 PF00106 short chain dehydrogenase IE4872_PD01847 PF00294 pfkB family carbohydrate kinase IE4872_PD01851 PF00005 ABC transporter IE4872_PD01851 PF03459 TOBE domain IE4872_PD01851 PF17912 MalK OB fold domain IE4872_PD01852 PF00107 Zinc-binding dehydrogenase IE4872_PD01852 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD01854 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01855 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01857 PF12833 Helix-turn-helix domain IE4872_PD01858 PF01261 Xylose isomerase-like TIM barrel IE4872_PD01859 PF01047 MarR family IE4872_PD01859 PF00480 ROK family IE4872_PD01860 PF00294 pfkB family carbohydrate kinase IE4872_PD01861 PF08013 Tagatose 6 phosphate kinase IE4872_PD01870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01870 PF03466 LysR substrate binding domain IE4872_PD01875 PF00072 Response regulator receiver domain IE4872_PD01877 PF01370 NAD dependent epimerase/dehydratase family IE4872_PD01879 PF00701 Dihydrodipicolinate synthetase family IE4872_PD01881 PF01547 Bacterial extracellular solute-binding protein IE4872_PD01883 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01888 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IE4872_PD01891 PF01381 Helix-turn-helix IE4872_PD01893 PF00708 Acylphosphatase IE4872_PD01894 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IE4872_PD01896 PF03480 Bacterial extracellular solute-binding protein, family 7 IE4872_PD01898 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01898 PF03466 LysR substrate binding domain IE4872_PD01899 PF01965 DJ-1/PfpI family IE4872_PD01899 PF12833 Helix-turn-helix domain IE4872_PD01900 PF05853 beta-keto acid cleavage enzyme IE4872_PD01901 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IE4872_PD01901 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IE4872_PD01902 PF02770 Acyl-CoA dehydrogenase, middle domain IE4872_PD01902 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IE4872_PD01902 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IE4872_PD01903 PF08442 ATP-grasp domain IE4872_PD01903 PF00549 CoA-ligase IE4872_PD01904 PF00378 Enoyl-CoA hydratase/isomerase IE4872_PD01905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD01906 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01908 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD01908 PF00005 ABC transporter IE4872_PD01909 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IE4872_PD01909 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain IE4872_PD01910 PF07859 alpha/beta hydrolase fold IE4872_PD01911 PF01037 Lrp/AsnC ligand binding domain IE4872_PD01913 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD01913 PF07729 FCD domain IE4872_PD01914 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain IE4872_PD01914 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain IE4872_PD01915 PF07005 Sugar-binding N-terminal domain IE4872_PD01915 PF17042 Nucleotide-binding C-terminal domain IE4872_PD01917 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term IE4872_PD01917 PF10727 Rossmann-like domain IE4872_PD01918 PF13407 Periplasmic binding protein domain IE4872_PD01920 PF00005 ABC transporter IE4872_PD01921 PF02653 Branched-chain amino acid transport system / permease component IE4872_PD01922 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD01922 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD01924 PF02733 Dak1 domain IE4872_PD01925 PF02734 DAK2 domain IE4872_PD01927 PF16200 C-terminal region of band_7 IE4872_PD01927 PF01145 SPFH domain / Band 7 family IE4872_PD01935 PF01547 Bacterial extracellular solute-binding protein IE4872_PD01937 PF07470 Glycosyl Hydrolase Family 88 IE4872_PD01939 PF00005 ABC transporter IE4872_PD01939 PF17912 MalK OB fold domain IE4872_PD01940 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01941 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01942 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD01943 PF00459 Inositol monophosphatase family IE4872_PD01944 PF03009 Glycerophosphoryl diester phosphodiesterase family IE4872_PD01945 PF00005 ABC transporter IE4872_PD01945 PF17912 MalK OB fold domain IE4872_PD01946 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01947 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01948 PF13416 Bacterial extracellular solute-binding protein IE4872_PD01949 PF00480 ROK family IE4872_PD01949 PF01047 MarR family IE4872_PD01950 PF01168 Alanine racemase, N-terminal domain IE4872_PD01950 PF14031 Putative serine dehydratase domain IE4872_PD01951 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_PD01952 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01953 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01954 PF00005 ABC transporter IE4872_PD01958 PF03737 Aldolase/RraA IE4872_PD01959 PF00497 Bacterial extracellular solute-binding proteins, family 3 IE4872_PD01960 PF00005 ABC transporter IE4872_PD01961 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01962 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01963 PF00106 short chain dehydrogenase IE4872_PD01964 PF03466 LysR substrate binding domain IE4872_PD01964 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD01966 PF03746 LamB/YcsF family IE4872_PD01967 PF02626 Carboxyltransferase domain, subdomain A and B IE4872_PD01970 PF02785 Biotin carboxylase C-terminal domain IE4872_PD01970 PF00289 Biotin carboxylase, N-terminal domain IE4872_PD01970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IE4872_PD01971 PF00364 Biotin-requiring enzyme IE4872_PD01973 PF09957 Bacterial antitoxin of type II TA system, VapB IE4872_PD01974 PF01850 PIN domain IE4872_PD01977 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_PD01981 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IE4872_PD01982 PF00005 ABC transporter IE4872_PD01983 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD01987 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH IE4872_PD01989 PF01850 PIN domain IE4872_PD01990 PF07886 BA14K-like protein IE4872_PD01993 PF00072 Response regulator receiver domain IE4872_PD01993 PF00486 Transcriptional regulatory protein, C terminal IE4872_PD01994 PF13419 Haloacid dehalogenase-like hydrolase IE4872_PD01996 PF00561 alpha/beta hydrolase fold IE4872_PD01997 PF13847 Methyltransferase domain IE4872_PD01997 PF03551 Transcriptional regulator PadR-like family IE4872_PD01999 PF00561 alpha/beta hydrolase fold IE4872_PD02004 PF00501 AMP-binding enzyme IE4872_PD02004 PF13193 AMP-binding enzyme C-terminal domain IE4872_PD02005 PF00842 Alanine racemase, C-terminal domain IE4872_PD02005 PF01757 Acyltransferase family IE4872_PD02005 PF01168 Alanine racemase, N-terminal domain IE4872_PD02006 PF01544 CorA-like Mg2+ transporter protein IE4872_PD02010 PF00174 Oxidoreductase molybdopterin binding domain IE4872_PD02016 PF02397 Bacterial sugar transferase IE4872_PD02019 PF02563 Polysaccharide biosynthesis/export protein IE4872_PD02021 PF13614 AAA domain IE4872_PD02021 PF13807 G-rich domain on putative tyrosine kinase IE4872_PD02021 PF02706 Chain length determinant protein IE4872_PD02022 PF00534 Glycosyl transferases group 1 IE4872_PD02022 PF13439 Glycosyltransferase Family 4 IE4872_PD02024 PF03023 Lipid II flippase MurJ IE4872_PD02029 PF13614 AAA domain IE4872_PD02029 PF02706 Chain length determinant protein IE4872_PD02029 PF13807 G-rich domain on putative tyrosine kinase IE4872_PD02031 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IE4872_PD02031 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IE4872_PD02031 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IE4872_PD02031 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IE4872_PD02032 PF00483 Nucleotidyl transferase IE4872_PD02032 PF01050 Mannose-6-phosphate isomerase IE4872_PD02033 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IE4872_PD02033 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IE4872_PD02033 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IE4872_PD02039 PF02899 Phage integrase, N-terminal SAM-like domain IE4872_PD02039 PF00589 Phage integrase family IE4872_PD02053 PF07729 FCD domain IE4872_PD02053 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD02054 PF02608 ABC transporter substrate-binding protein PnrA-like IE4872_PD02057 PF00795 Carbon-nitrogen hydrolase IE4872_PD02058 PF00857 Isochorismatase family IE4872_PD02060 PF00857 Isochorismatase family IE4872_PD02062 PF01425 Amidase IE4872_PD02066 PF01425 Amidase IE4872_PD02070 PF07969 Amidohydrolase family IE4872_PD02071 PF00589 Phage integrase family IE4872_PD02071 PF02899 Phage integrase, N-terminal SAM-like domain IE4872_PD02072 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IE4872_PD02074 PF07690 Major Facilitator Superfamily IE4872_PD02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD02075 PF03466 LysR substrate binding domain IE4872_PD02078 PF06532 Negative regulator of sigma F IE4872_PD02079 PF04542 Sigma-70 region 2 IE4872_PD02079 PF08281 Sigma-70, region 4 IE4872_PD02081 PF05114 Protein of unknown function (DUF692) IE4872_PD02084 PF12852 Cupin IE4872_PD02084 PF12833 Helix-turn-helix domain IE4872_PD02085 PF00561 alpha/beta hydrolase fold IE4872_PD02086 PF07992 Pyridine nucleotide-disulphide oxidoreductase IE4872_PD02091 PF16123 Hydroxyacylglutathione hydrolase C-terminus IE4872_PD02091 PF00753 Metallo-beta-lactamase superfamily IE4872_PD02092 PF11972 HTH DNA binding domain IE4872_PD02092 PF07756 Protein of unknown function (DUF1612) IE4872_PD02094 PF03050 Transposase IS66 family IE4872_PD02098 PF05717 IS66 Orf2 like protein IE4872_PD02101 PF01548 Transposase IE4872_PD02101 PF02371 Transposase IS116/IS110/IS902 family IE4872_PD02102 PF12833 Helix-turn-helix domain IE4872_PD02102 PF06719 AraC-type transcriptional regulator N-terminus IE4872_PD02103 PF04542 Sigma-70 region 2 IE4872_PD02103 PF08281 Sigma-70, region 4 IE4872_PD02107 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD02107 PF03466 LysR substrate binding domain IE4872_PD02108 PF13191 AAA ATPase domain IE4872_PD02108 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_PD02109 PF00589 Phage integrase family IE4872_PD02109 PF13495 Phage integrase, N-terminal SAM-like domain IE4872_PD02110 PF04986 Putative transposase IE4872_PD02110 PF14319 Transposase zinc-binding domain IE4872_PD02112 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD02112 PF03466 LysR substrate binding domain IE4872_PD02113 PF00753 Metallo-beta-lactamase superfamily IE4872_PD02118 PF04986 Putative transposase IE4872_PD02118 PF14319 Transposase zinc-binding domain IE4872_PD02119 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD02119 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IE4872_PD02120 PF13416 Bacterial extracellular solute-binding protein IE4872_PD02121 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02122 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02123 PF08402 TOBE domain IE4872_PD02123 PF00005 ABC transporter IE4872_PD02125 PF00950 ABC 3 transport family IE4872_PD02126 PF00950 ABC 3 transport family IE4872_PD02127 PF00005 ABC transporter IE4872_PD02128 PF01297 Zinc-uptake complex component A periplasmic IE4872_PD02129 PF00561 alpha/beta hydrolase fold IE4872_PD02133 PF13188 PAS domain IE4872_PD02133 PF00563 EAL domain IE4872_PD02133 PF00990 Diguanylate cyclase, GGDEF domain IE4872_PD02133 PF03707 Bacterial signalling protein N terminal repeat IE4872_PD02135 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IE4872_PD02136 PF00557 Metallopeptidase family M24 IE4872_PD02136 PF01321 Creatinase/Prolidase N-terminal domain IE4872_PD02137 PF02423 Ornithine cyclodeaminase/mu-crystallin family IE4872_PD02138 PF00291 Pyridoxal-phosphate dependent enzyme IE4872_PD02140 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02141 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02143 PF00005 ABC transporter IE4872_PD02144 PF00155 Aminotransferase class I and II IE4872_PD02144 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD02145 PF01037 Lrp/AsnC ligand binding domain IE4872_PD02146 PF00171 Aldehyde dehydrogenase family IE4872_PD02147 PF00202 Aminotransferase class-III IE4872_PD02148 PF00107 Zinc-binding dehydrogenase IE4872_PD02148 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD02152 PF01565 FAD binding domain IE4872_PD02152 PF08031 Berberine and berberine like IE4872_PD02153 PF06508 Queuosine biosynthesis protein QueC IE4872_PD02154 PF01242 6-pyruvoyl tetrahydropterin synthase IE4872_PD02155 PF04055 Radical SAM superfamily IE4872_PD02161 PF01022 Bacterial regulatory protein, arsR family IE4872_PD02164 PF02899 Phage integrase, N-terminal SAM-like domain IE4872_PD02164 PF00589 Phage integrase family IE4872_PD02167 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD02167 PF03466 LysR substrate binding domain IE4872_PD02170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IE4872_PD02171 PF08501 Shikimate dehydrogenase substrate binding domain IE4872_PD02171 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IE4872_PD02172 PF03480 Bacterial extracellular solute-binding protein, family 7 IE4872_PD02173 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IE4872_PD02174 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IE4872_PD02175 PF00440 Bacterial regulatory proteins, tetR family IE4872_PD02175 PF17938 Tetracyclin repressor-like, C-terminal domain IE4872_PD02188 PF13593 SBF-like CPA transporter family (DUF4137) IE4872_PD02190 PF00005 ABC transporter IE4872_PD02190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD02191 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD02191 PF00005 ABC transporter IE4872_PD02193 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02194 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD02195 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD02195 PF07729 FCD domain IE4872_PD02198 PF05973 Phage derived protein Gp49-like (DUF891) IE4872_PD02208 PF00106 short chain dehydrogenase IE4872_PD02211 PF08240 Alcohol dehydrogenase GroES-like domain IE4872_PD02211 PF00107 Zinc-binding dehydrogenase IE4872_PD02213 PF01381 Helix-turn-helix IE4872_PD02214 PF13635 Domain of unknown function (DUF4143) IE4872_PD02214 PF13173 AAA domain IE4872_PD02215 PF00753 Metallo-beta-lactamase superfamily IE4872_PD02216 PF03466 LysR substrate binding domain IE4872_PD02216 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD02220 PF03466 LysR substrate binding domain IE4872_PD02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD02223 PF00248 Aldo/keto reductase family IE4872_PD02224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IE4872_PD02224 PF03466 LysR substrate binding domain IE4872_PD02225 PF00440 Bacterial regulatory proteins, tetR family IE4872_PD02225 PF16859 Tetracyclin repressor-like, C-terminal domain IE4872_PD02226 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IE4872_PD02226 PF13378 Enolase C-terminal domain-like IE4872_PD02227 PF13378 Enolase C-terminal domain-like IE4872_PD02227 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IE4872_PD02228 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IE4872_PD02228 PF13378 Enolase C-terminal domain-like IE4872_PD02229 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD02229 PF07729 FCD domain IE4872_PD02230 PF01547 Bacterial extracellular solute-binding protein IE4872_PD02231 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02232 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02233 PF03459 TOBE domain IE4872_PD02233 PF00005 ABC transporter IE4872_PD02233 PF17912 MalK OB fold domain IE4872_PD02234 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IE4872_PD02234 PF13378 Enolase C-terminal domain-like IE4872_PD02235 PF03737 Aldolase/RraA IE4872_PD02236 PF03781 Sulfatase-modifying factor enzyme 1 IE4872_PD02239 PF00884 Sulfatase IE4872_PD02243 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IE4872_PD02243 PF01348 Type II intron maturase IE4872_PD02248 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02249 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02250 PF13416 Bacterial extracellular solute-binding protein IE4872_PD02251 PF17912 MalK OB fold domain IE4872_PD02251 PF00005 ABC transporter IE4872_PD02252 PF06964 Alpha-L-arabinofuranosidase C-terminal domain IE4872_PD02253 PF02705 K+ potassium transporter IE4872_PD02254 PF01613 Flavin reductase like domain IE4872_PD02255 PF01177 Asp/Glu/Hydantoin racemase IE4872_PD02256 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02257 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02259 PF08402 TOBE domain IE4872_PD02259 PF00005 ABC transporter IE4872_PD02261 PF07859 alpha/beta hydrolase fold IE4872_PD02265 PF00534 Glycosyl transferases group 1 IE4872_PD02266 PF01370 NAD dependent epimerase/dehydratase family IE4872_PD02267 PF02397 Bacterial sugar transferase IE4872_PD02274 PF02350 UDP-N-acetylglucosamine 2-epimerase IE4872_PD02276 PF03808 Glycosyl transferase WecB/TagA/CpsF family IE4872_PD02279 PF02563 Polysaccharide biosynthesis/export protein IE4872_PD02281 PF00704 Glycosyl hydrolases family 18 IE4872_PD02281 PF00041 Fibronectin type III domain IE4872_PD02284 PF00005 ABC transporter IE4872_PD02284 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD02285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IE4872_PD02285 PF00005 ABC transporter IE4872_PD02286 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02286 PF12911 N-terminal TM domain of oligopeptide transport permease C IE4872_PD02287 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02288 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IE4872_PD02289 PF00356 Bacterial regulatory proteins, lacI family IE4872_PD02290 PF00183 Hsp90 protein IE4872_PD02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD02292 PF13191 AAA ATPase domain IE4872_PD02292 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_PD02293 PF13520 Amino acid permease IE4872_PD02294 PF07729 FCD domain IE4872_PD02294 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD02295 PF03786 D-mannonate dehydratase (UxuA) IE4872_PD02297 PF16701 Adenylate cyclase regulatory domain IE4872_PD02297 PF00211 Adenylate and Guanylate cyclase catalytic domain IE4872_PD02305 PF02082 Transcriptional regulator IE4872_PD02306 PF00072 Response regulator receiver domain IE4872_PD02306 PF00196 Bacterial regulatory proteins, luxR family IE4872_PD02307 PF00072 Response regulator receiver domain IE4872_PD02307 PF00196 Bacterial regulatory proteins, luxR family IE4872_PD02308 PF08447 PAS fold IE4872_PD02308 PF13426 PAS domain IE4872_PD02308 PF00989 PAS fold IE4872_PD02308 PF00512 His Kinase A (phospho-acceptor) domain IE4872_PD02308 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IE4872_PD02308 PF13493 Domain of unknown function (DUF4118) IE4872_PD02310 PF07729 FCD domain IE4872_PD02310 PF00392 Bacterial regulatory proteins, gntR family IE4872_PD02311 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD02311 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD02312 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IE4872_PD02312 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IE4872_PD02314 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02315 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02316 PF00005 ABC transporter IE4872_PD02316 PF17912 MalK OB fold domain IE4872_PD02316 PF03459 TOBE domain IE4872_PD02317 PF00892 EamA-like transporter family IE4872_PD02318 PF01810 LysE type translocator IE4872_PD02323 PF00571 CBS domain IE4872_PD02323 PF03471 Transporter associated domain IE4872_PD02323 PF01595 Cyclin M transmembrane N-terminal domain IE4872_PD02324 PF07995 Glucose / Sorbosone dehydrogenase IE4872_PD02325 PF08281 Sigma-70, region 4 IE4872_PD02325 PF04542 Sigma-70 region 2 IE4872_PD02327 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IE4872_PD02327 PF00034 Cytochrome c IE4872_PD02327 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_PD02328 PF01799 [2Fe-2S] binding domain IE4872_PD02328 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_PD02329 PF00034 Cytochrome c IE4872_PD02329 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IE4872_PD02329 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_PD02334 PF00005 ABC transporter IE4872_PD02337 PF10503 Esterase PHB depolymerase IE4872_PD02339 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02340 PF00528 Binding-protein-dependent transport system inner membrane component IE4872_PD02341 PF09084 NMT1/THI5 like IE4872_PD02342 PF00005 ABC transporter IE4872_PD02344 PF07690 Major Facilitator Superfamily IE4872_PD02345 PF01381 Helix-turn-helix IE4872_PD02346 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IE4872_PD02346 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IE4872_PD02347 PF03450 CO dehydrogenase flavoprotein C-terminal domain IE4872_PD02347 PF00941 FAD binding domain in molybdopterin dehydrogenase IE4872_PD02348 PF00111 2Fe-2S iron-sulfur cluster binding domain IE4872_PD02348 PF01799 [2Fe-2S] binding domain IE4872_PD02348 PF10518 TAT (twin-arginine translocation) pathway signal sequence IE4872_PD02349 PF17925 Tetracyclin repressor-like, C-terminal domain IE4872_PD02349 PF00440 Bacterial regulatory proteins, tetR family IE4872_PD02354 PF01850 PIN domain IE4872_PD02356 PF00376 MerR family regulatory protein IE4872_PD02356 PF13614 AAA domain IE4872_PD02357 PF02195 ParB-like nuclease domain IE4872_PD02357 PF07506 RepB plasmid partitioning protein IE4872_PD02358 PF03428 Replication protein C N-terminal domain IE4872_PD02358 PF11800 Replication protein C C-terminal region