locus-tag class description NOVO_00015 PF13358 DDE superfamily endonuclease NOVO_00030 PF12796 Ankyrin repeats (3 copies) NOVO_00040 PF00375 Sodium:dicarboxylate symporter family NOVO_00050 PF02381 MraZ protein, putative antitoxin-like NOVO_00060 PF01795 MraW methylase family NOVO_00070 PF00905 Penicillin binding protein transpeptidase domain NOVO_00070 PF03717 Penicillin-binding Protein dimerisation domain NOVO_00075 PF08245 Mur ligase middle domain NOVO_00075 PF02875 Mur ligase family, glutamate ligase domain NOVO_00075 PF01225 Mur ligase family, catalytic domain NOVO_00085 PF13358 DDE superfamily endonuclease NOVO_00160 PF00285 Citrate synthase, C-terminal domain NOVO_00170 PF13358 DDE superfamily endonuclease NOVO_00185 PF05192 MutS domain III NOVO_00185 PF05188 MutS domain II NOVO_00185 PF01624 MutS domain I NOVO_00185 PF00488 MutS domain V NOVO_00185 PF05190 MutS family domain IV NOVO_00200 PF02441 Flavoprotein NOVO_00205 PF02875 Mur ligase family, glutamate ligase domain NOVO_00205 PF01225 Mur ligase family, catalytic domain NOVO_00205 PF08245 Mur ligase middle domain NOVO_00210 PF04608 Phosphatidylglycerophosphatase A NOVO_00220 PF00202 Aminotransferase class-III NOVO_00245 PF13358 DDE superfamily endonuclease NOVO_00260 PF04101 Glycosyltransferase family 28 C-terminal domain NOVO_00260 PF03033 Glycosyltransferase family 28 N-terminal domain NOVO_00265 PF01098 Cell cycle protein NOVO_00270 PF00578 AhpC/TSA family NOVO_00270 PF10417 C-terminal domain of 1-Cys peroxiredoxin NOVO_00275 PF07992 Pyridine nucleotide-disulphide oxidoreductase NOVO_00350 PF01734 Patatin-like phospholipase NOVO_00365 PF13358 DDE superfamily endonuclease NOVO_00455 PF01381 Helix-turn-helix NOVO_00495 PF07690 Major Facilitator Superfamily NOVO_00515 PF01209 ubiE/COQ5 methyltransferase family NOVO_00520 PF03109 ABC1 family NOVO_00550 PF13358 DDE superfamily endonuclease NOVO_00570 PF00326 Prolyl oligopeptidase family NOVO_00575 PF00484 Carbonic anhydrase NOVO_00590 PF13358 DDE superfamily endonuclease NOVO_00605 PF02561 Flagellar protein FliS NOVO_00610 PF02465 Flagellar hook-associated protein 2 N-terminus NOVO_00610 PF07196 Flagellin hook IN motif NOVO_00610 PF07195 Flagellar hook-associated protein 2 C-terminus NOVO_00615 PF01192 RNA polymerase Rpb6 NOVO_00625 PF13358 DDE superfamily endonuclease NOVO_00630 PF01336 OB-fold nucleic acid binding domain NOVO_00630 PF00152 tRNA synthetases class II (D, K and N) NOVO_00630 PF02938 GAD domain NOVO_00650 PF08543 Phosphomethylpyrimidine kinase NOVO_00655 PF02110 Hydroxyethylthiazole kinase family NOVO_00660 PF02581 Thiamine monophosphate synthase NOVO_00665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NOVO_00675 PF17284 Spermidine synthase tetramerisation domain NOVO_00680 PF13358 DDE superfamily endonuclease NOVO_00695 PF13288 DXP reductoisomerase C-terminal domain NOVO_00695 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NOVO_00695 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NOVO_00715 PF12796 Ankyrin repeats (3 copies) NOVO_00720 PF01327 Polypeptide deformylase NOVO_00725 PF02844 Phosphoribosylglycinamide synthetase, N domain NOVO_00725 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NOVO_00725 PF02843 Phosphoribosylglycinamide synthetase, C domain NOVO_00730 PF13742 OB-fold nucleic acid binding domain NOVO_00730 PF02601 Exonuclease VII, large subunit NOVO_00735 PF03966 Trm112p-like protein NOVO_00740 PF02151 UvrB/uvrC motif NOVO_00740 PF12826 Helix-hairpin-helix motif NOVO_00740 PF08459 UvrC Helix-hairpin-helix N-terminal NOVO_00740 PF01541 GIY-YIG catalytic domain NOVO_00745 PF01066 CDP-alcohol phosphatidyltransferase NOVO_00750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NOVO_00755 PF01430 Hsp33 protein NOVO_00760 PF13687 Domain of unknown function (DUF4153) NOVO_00765 PF07690 Major Facilitator Superfamily NOVO_00770 PF13533 Biotin-lipoyl like NOVO_00780 PF04085 rod shape-determining protein MreC NOVO_00800 PF01063 Amino-transferase class IV NOVO_00805 PF00158 Sigma-54 interaction domain NOVO_00805 PF00072 Response regulator receiver domain NOVO_00805 PF02954 Bacterial regulatory protein, Fis family NOVO_00810 PF02223 Thymidylate kinase NOVO_00815 PF01161 Phosphatidylethanolamine-binding protein NOVO_00820 PF04430 Protein of unknown function (DUF498/DUF598) NOVO_00825 PF02355 Protein export membrane protein NOVO_00830 PF13286 Phosphohydrolase-associated domain NOVO_00830 PF01966 HD domain NOVO_00840 PF13358 DDE superfamily endonuclease NOVO_00875 PF01472 PUA domain NOVO_00875 PF00696 Amino acid kinase family NOVO_00885 PF04364 DNA polymerase III chi subunit, HolC NOVO_00890 PF02789 Cytosol aminopeptidase family, N-terminal domain NOVO_00890 PF00883 Cytosol aminopeptidase family, catalytic domain NOVO_00895 PF09335 SNARE associated Golgi protein NOVO_00900 PF03190 Protein of unknown function, DUF255 NOVO_00935 PF01027 Inhibitor of apoptosis-promoting Bax1 NOVO_00950 PF10871 Protein of unknown function (DUF2748) NOVO_00955 PF00512 His Kinase A (phospho-acceptor) domain NOVO_00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_00955 PF00672 HAMP domain NOVO_00955 PF13426 PAS domain NOVO_00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_00965 PF00512 His Kinase A (phospho-acceptor) domain NOVO_00965 PF08448 PAS fold NOVO_00965 PF13188 PAS domain NOVO_00965 PF00072 Response regulator receiver domain NOVO_00970 PF13358 DDE superfamily endonuclease NOVO_00990 PF00672 HAMP domain NOVO_00990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_00990 PF00512 His Kinase A (phospho-acceptor) domain NOVO_00990 PF01627 Hpt domain NOVO_00990 PF00072 Response regulator receiver domain NOVO_00990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NOVO_01000 PF13358 DDE superfamily endonuclease NOVO_01015 PF00771 FHIPEP family NOVO_01020 PF01553 Acyltransferase NOVO_01025 PF04379 ApaG domain NOVO_01045 PF01728 FtsJ-like methyltransferase NOVO_01045 PF01479 S4 domain NOVO_01070 PF17782 DprA winged helix domain NOVO_01070 PF02481 DNA recombination-mediator protein A NOVO_01075 PF01396 Topoisomerase DNA binding C4 zinc finger NOVO_01075 PF13368 Topoisomerase C-terminal repeat NOVO_01075 PF01751 Toprim domain NOVO_01075 PF01131 DNA topoisomerase NOVO_01085 PF00589 Phage integrase family NOVO_01085 PF02899 Phage integrase, N-terminal SAM-like domain NOVO_01090 PF00155 Aminotransferase class I and II NOVO_01120 PF13358 DDE superfamily endonuclease NOVO_01160 PF13358 DDE superfamily endonuclease NOVO_01190 PF01367 5'-3' exonuclease, C-terminal SAM fold NOVO_01190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NOVO_01190 PF00476 DNA polymerase family A NOVO_01195 PF00085 Thioredoxin NOVO_01255 PF13358 DDE superfamily endonuclease NOVO_01260 PF00694 Aconitase C-terminal domain NOVO_01260 PF00330 Aconitase family (aconitate hydratase) NOVO_01285 PF13302 Acetyltransferase (GNAT) domain NOVO_01340 PF02033 Ribosome-binding factor A NOVO_01345 PF04760 Translation initiation factor IF-2, N-terminal region NOVO_01345 PF08364 Bacterial translation initiation factor IF-2 associated region NOVO_01345 PF11987 Translation-initiation factor 2 NOVO_01345 PF03144 Elongation factor Tu domain 2 NOVO_01345 PF00009 Elongation factor Tu GTP binding domain NOVO_01350 PF08529 NusA N-terminal domain NOVO_01350 PF00575 S1 RNA binding domain NOVO_01350 PF13184 NusA-like KH domain NOVO_01355 PF17384 RimP C-terminal SH3 domain NOVO_01355 PF02576 RimP N-terminal domain NOVO_01360 PF03485 Arginyl tRNA synthetase N terminal domain NOVO_01360 PF05746 DALR anticodon binding domain NOVO_01360 PF00750 tRNA synthetases class I (R) NOVO_01400 PF00905 Penicillin binding protein transpeptidase domain NOVO_01405 PF00551 Formyl transferase NOVO_01410 PF02769 AIR synthase related protein, C-terminal domain NOVO_01410 PF00586 AIR synthase related protein, N-terminal domain NOVO_01420 PF01594 AI-2E family transporter NOVO_01430 PF01245 Ribosomal protein L19 NOVO_01450 PF02154 Flagellar motor switch protein FliM NOVO_01450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NOVO_01455 PF03748 Flagellar basal body-associated protein FliL NOVO_01460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NOVO_01460 PF00460 Flagella basal body rod protein NOVO_01460 PF07559 Flagellar basal body protein FlaE NOVO_01465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NOVO_01465 PF00460 Flagella basal body rod protein NOVO_01470 PF13358 DDE superfamily endonuclease NOVO_01480 PF10768 Class II flagellar assembly regulator NOVO_01485 PF00892 EamA-like transporter family NOVO_01490 PF00510 Cytochrome c oxidase subunit III NOVO_01505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NOVO_01505 PF02403 Seryl-tRNA synthetase N-terminal domain NOVO_01510 PF00902 Sec-independent protein translocase protein (TatC) NOVO_01520 PF02167 Cytochrome C1 family NOVO_01525 PF00032 Cytochrome b(C-terminal)/b6/petD NOVO_01525 PF00033 Cytochrome b/b6/petB NOVO_01530 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NOVO_01530 PF00355 Rieske [2Fe-2S] domain NOVO_01535 PF13426 PAS domain NOVO_01535 PF00672 HAMP domain NOVO_01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_01535 PF00512 His Kinase A (phospho-acceptor) domain NOVO_01540 PF01627 Hpt domain NOVO_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_01540 PF00072 Response regulator receiver domain NOVO_01540 PF17149 Periplasmic sensor domain found in signal transduction proteins NOVO_01540 PF00672 HAMP domain NOVO_01540 PF00512 His Kinase A (phospho-acceptor) domain NOVO_01545 PF00155 Aminotransferase class I and II NOVO_01550 PF00950 ABC 3 transport family NOVO_01560 PF07690 Major Facilitator Superfamily NOVO_01575 PF01168 Alanine racemase, N-terminal domain NOVO_01590 PF01479 S4 domain NOVO_01590 PF00849 RNA pseudouridylate synthase NOVO_01595 PF07722 Peptidase C26 NOVO_01600 PF08946 Osmosensory transporter coiled coil NOVO_01600 PF00083 Sugar (and other) transporter NOVO_01605 PF03372 Endonuclease/Exonuclease/phosphatase family NOVO_01610 PF16200 C-terminal region of band_7 NOVO_01610 PF01145 SPFH domain / Band 7 family NOVO_01620 PF00034 Cytochrome c NOVO_01625 PF00375 Sodium:dicarboxylate symporter family NOVO_01630 PF16868 NMT1-like family NOVO_01635 PF00582 Universal stress protein family NOVO_01640 PF00348 Polyprenyl synthetase NOVO_01645 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NOVO_01645 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NOVO_01650 PF07992 Pyridine nucleotide-disulphide oxidoreductase NOVO_01655 PF01098 Cell cycle protein NOVO_01715 PF00437 Type II/IV secretion system protein NOVO_01730 PF03135 CagE, TrbE, VirB family, component of type IV transporter system NOVO_01755 PF04335 VirB8 protein NOVO_01760 PF03524 Conjugal transfer protein NOVO_01765 PF03743 Bacterial conjugation TrbI-like protein NOVO_01780 PF01609 Transposase DDE domain NOVO_01795 PF13358 DDE superfamily endonuclease NOVO_01800 PF01043 SecA preprotein cross-linking domain NOVO_01800 PF07517 SecA DEAD-like domain NOVO_01805 PF13358 DDE superfamily endonuclease NOVO_01815 PF04011 LemA family NOVO_01820 PF00575 S1 RNA binding domain NOVO_01825 PF02224 Cytidylate kinase NOVO_01830 PF00011 Hsp20/alpha crystallin family NOVO_01840 PF00171 Aldehyde dehydrogenase family NOVO_01845 PF12704 MacB-like periplasmic core domain NOVO_01845 PF02687 FtsX-like permease family NOVO_01850 PF00005 ABC transporter NOVO_01855 PF00483 Nucleotidyl transferase NOVO_01870 PF01938 TRAM domain NOVO_01870 PF05958 tRNA (Uracil-5-)-methyltransferase NOVO_01885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NOVO_01885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NOVO_01910 PF01471 Putative peptidoglycan binding domain NOVO_01910 PF01510 N-acetylmuramoyl-L-alanine amidase NOVO_01910 PF01476 LysM domain NOVO_01920 PF13358 DDE superfamily endonuclease NOVO_01925 PF03129 Anticodon binding domain NOVO_01925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NOVO_01935 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NOVO_01940 PF00448 SRP54-type protein, GTPase domain NOVO_01940 PF02881 SRP54-type protein, helical bundle domain NOVO_01945 PF04055 Radical SAM superfamily NOVO_01945 PF00919 Uncharacterized protein family UPF0004 NOVO_01950 PF01678 Diaminopimelate epimerase NOVO_01955 PF03796 DnaB-like helicase C terminal domain NOVO_01955 PF00772 DnaB-like helicase N terminal domain NOVO_01960 PF01168 Alanine racemase, N-terminal domain NOVO_01960 PF00842 Alanine racemase, C-terminal domain NOVO_01965 PF02630 SCO1/SenC NOVO_01970 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NOVO_02025 PF01609 Transposase DDE domain NOVO_02040 PF02796 Helix-turn-helix domain of resolvase NOVO_02040 PF00239 Resolvase, N terminal domain NOVO_02090 PF07836 DmpG-like communication domain NOVO_02090 PF00682 HMGL-like NOVO_02105 PF02810 SEC-C motif NOVO_02105 PF07517 SecA DEAD-like domain NOVO_02105 PF01043 SecA preprotein cross-linking domain NOVO_02105 PF07516 SecA Wing and Scaffold domain NOVO_02120 PF01610 Transposase NOVO_02120 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NOVO_02120 PF13542 Helix-turn-helix domain of transposase family ISL3 NOVO_02150 PF01300 Telomere recombination NOVO_02155 PF00575 S1 RNA binding domain NOVO_02155 PF01138 3' exoribonuclease family, domain 1 NOVO_02155 PF00013 KH domain NOVO_02155 PF03725 3' exoribonuclease family, domain 2 NOVO_02155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NOVO_02160 PF00312 Ribosomal protein S15 NOVO_02165 PF16198 tRNA pseudouridylate synthase B C-terminal domain NOVO_02165 PF01509 TruB family pseudouridylate synthase (N terminal domain) NOVO_02170 PF00464 Serine hydroxymethyltransferase NOVO_02175 PF02502 Ribose/Galactose Isomerase NOVO_02185 PF01103 Surface antigen NOVO_02185 PF07244 Surface antigen variable number repeat NOVO_02190 PF02163 Peptidase family M50 NOVO_02190 PF17820 PDZ domain NOVO_02195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NOVO_02195 PF00056 lactate/malate dehydrogenase, NAD binding domain NOVO_02200 PF07733 Bacterial DNA polymerase III alpha NTPase domain NOVO_02200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NOVO_02200 PF14579 Helix-hairpin-helix motif NOVO_02200 PF02811 PHP domain NOVO_02210 PF16113 Enoyl-CoA hydratase/isomerase NOVO_02210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NOVO_02210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NOVO_02240 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NOVO_02240 PF03147 Ferredoxin-fold anticodon binding domain NOVO_02240 PF03484 tRNA synthetase B5 domain NOVO_02240 PF01588 Putative tRNA binding domain NOVO_02240 PF03483 B3/4 domain NOVO_02245 PF01409 tRNA synthetases class II core domain (F) NOVO_02245 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NOVO_02250 PF01520 N-acetylmuramoyl-L-alanine amidase NOVO_02250 PF11741 AMIN domain NOVO_02255 PF12111 Polyribonucleotide phosphorylase C terminal NOVO_02255 PF10150 Ribonuclease E/G family NOVO_02255 PF00575 S1 RNA binding domain NOVO_02265 PF00933 Glycosyl hydrolase family 3 N terminal domain NOVO_02270 PF01370 NAD dependent epimerase/dehydratase family NOVO_02275 PF06418 CTP synthase N-terminus NOVO_02275 PF00117 Glutamine amidotransferase class-I NOVO_02285 PF00121 Triosephosphate isomerase NOVO_02290 PF00639 PPIC-type PPIASE domain NOVO_02295 PF00313 'Cold-shock' DNA-binding domain NOVO_02300 PF00270 DEAD/DEAH box helicase NOVO_02300 PF00271 Helicase conserved C-terminal domain NOVO_02305 PF07559 Flagellar basal body protein FlaE NOVO_02305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NOVO_02305 PF00460 Flagella basal body rod protein NOVO_02310 PF13861 FlgD Tudor-like domain NOVO_02310 PF03963 Flagellar hook capping protein - N-terminal region NOVO_02310 PF13860 FlgD Ig-like domain NOVO_02325 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NOVO_02325 PF03900 Porphobilinogen deaminase, C-terminal domain NOVO_02330 PF00268 Ribonucleotide reductase, small chain NOVO_02335 PF00317 Ribonucleotide reductase, all-alpha domain NOVO_02335 PF02867 Ribonucleotide reductase, barrel domain NOVO_02335 PF03477 ATP cone domain NOVO_02345 PF03135 CagE, TrbE, VirB family, component of type IV transporter system NOVO_02375 PF01612 3'-5' exonuclease NOVO_02375 PF00570 HRDC domain NOVO_02395 PF00939 Sodium:sulfate symporter transmembrane region NOVO_02400 PF03167 Uracil DNA glycosylase superfamily NOVO_02405 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NOVO_02405 PF09397 Ftsk gamma domain NOVO_02405 PF17854 FtsK alpha domain NOVO_02405 PF01580 FtsK/SpoIIIE family NOVO_02410 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NOVO_02420 PF00309 Sigma-54 factor, Activator interacting domain (AID) NOVO_02420 PF04963 Sigma-54 factor, core binding domain NOVO_02420 PF04552 Sigma-54, DNA binding domain NOVO_02425 PF01381 Helix-turn-helix NOVO_02430 PF06071 Protein of unknown function (DUF933) NOVO_02430 PF01926 50S ribosome-binding GTPase NOVO_02440 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NOVO_02440 PF00953 Glycosyl transferase family 4 NOVO_02445 PF02875 Mur ligase family, glutamate ligase domain NOVO_02445 PF08245 Mur ligase middle domain NOVO_02445 PF01225 Mur ligase family, catalytic domain NOVO_02450 PF14622 Ribonuclease-III-like NOVO_02450 PF00035 Double-stranded RNA binding motif NOVO_02455 PF10502 Signal peptidase, peptidase S26 NOVO_02460 PF01676 Metalloenzyme superfamily NOVO_02460 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NOVO_02465 PF01895 PhoU domain NOVO_02470 PF01343 Peptidase family S49 NOVO_02475 PF08676 MutL C terminal dimerisation domain NOVO_02475 PF01119 DNA mismatch repair protein, C-terminal domain NOVO_02485 PF00072 Response regulator receiver domain NOVO_02485 PF00486 Transcriptional regulatory protein, C terminal NOVO_02490 PF00698 Acyl transferase domain NOVO_02500 PF00459 Inositol monophosphatase family NOVO_02505 PF08207 Elongation factor P (EF-P) KOW-like domain NOVO_02505 PF09285 Elongation factor P, C-terminal NOVO_02505 PF01132 Elongation factor P (EF-P) OB domain NOVO_02510 PF01791 DeoC/LacD family aldolase NOVO_02535 PF02599 Global regulator protein family NOVO_02545 PF00460 Flagella basal body rod protein NOVO_02545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NOVO_02555 PF01313 Bacterial export proteins, family 3 NOVO_02575 PF00453 Ribosomal protein L20 NOVO_02580 PF01632 Ribosomal protein L35 NOVO_02590 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NOVO_02590 PF00326 Prolyl oligopeptidase family NOVO_02600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NOVO_02600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NOVO_02600 PF12833 Helix-turn-helix domain NOVO_02600 PF02805 Metal binding domain of Ada NOVO_02605 PF01467 Cytidylyltransferase-like NOVO_02610 PF00521 DNA gyrase/topoisomerase IV, subunit A NOVO_02610 PF03989 DNA gyrase C-terminal domain, beta-propeller NOVO_02630 PF04983 RNA polymerase Rpb1, domain 3 NOVO_02630 PF04998 RNA polymerase Rpb1, domain 5 NOVO_02630 PF05000 RNA polymerase Rpb1, domain 4 NOVO_02630 PF04997 RNA polymerase Rpb1, domain 1 NOVO_02630 PF00623 RNA polymerase Rpb1, domain 2 NOVO_02635 PF10385 RNA polymerase beta subunit external 1 domain NOVO_02635 PF04560 RNA polymerase Rpb2, domain 7 NOVO_02635 PF04563 RNA polymerase beta subunit NOVO_02635 PF04561 RNA polymerase Rpb2, domain 2 NOVO_02635 PF04565 RNA polymerase Rpb2, domain 3 NOVO_02635 PF00562 RNA polymerase Rpb2, domain 6 NOVO_02640 PF16320 Ribosomal protein L7/L12 dimerisation domain NOVO_02640 PF00542 Ribosomal protein L7/L12 C-terminal domain NOVO_02645 PF00466 Ribosomal protein L10 NOVO_02650 PF00687 Ribosomal protein L1p/L10e family NOVO_02655 PF00298 Ribosomal protein L11, RNA binding domain NOVO_02655 PF03946 Ribosomal protein L11, N-terminal domain NOVO_02660 PF02357 Transcription termination factor nusG NOVO_02660 PF00467 KOW motif NOVO_02675 PF03144 Elongation factor Tu domain 2 NOVO_02675 PF03143 Elongation factor Tu C-terminal domain NOVO_02675 PF00009 Elongation factor Tu GTP binding domain NOVO_02680 PF14492 Elongation Factor G, domain II NOVO_02680 PF03764 Elongation factor G, domain IV NOVO_02680 PF00009 Elongation factor Tu GTP binding domain NOVO_02680 PF00679 Elongation factor G C-terminus NOVO_02680 PF03144 Elongation factor Tu domain 2 NOVO_02685 PF00177 Ribosomal protein S7p/S5e NOVO_02690 PF00164 Ribosomal protein S12/S23 NOVO_02700 PF03099 Biotin/lipoate A/B protein ligase family NOVO_02700 PF12706 Beta-lactamase superfamily domain NOVO_02705 PF01569 PAP2 superfamily NOVO_02715 PF00672 HAMP domain NOVO_02715 PF00512 His Kinase A (phospho-acceptor) domain NOVO_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_02720 PF00892 EamA-like transporter family NOVO_02725 PF04055 Radical SAM superfamily NOVO_02725 PF01938 TRAM domain NOVO_02725 PF00919 Uncharacterized protein family UPF0004 NOVO_02730 PF01475 Ferric uptake regulator family NOVO_02735 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) NOVO_02740 PF02464 Competence-damaged protein NOVO_02740 PF18146 Damage-inducible protein CinA KH domain NOVO_02740 PF00994 Probable molybdopterin binding domain NOVO_02745 PF00557 Metallopeptidase family M24 NOVO_02750 PF04002 RadC-like JAB domain NOVO_02765 PF00375 Sodium:dicarboxylate symporter family NOVO_02770 PF01820 D-ala D-ala ligase N-terminus NOVO_02770 PF07478 D-ala D-ala ligase C-terminus NOVO_02775 PF08245 Mur ligase middle domain NOVO_02780 PF12705 PD-(D/E)XK nuclease superfamily NOVO_02780 PF13361 UvrD-like helicase C-terminal domain NOVO_02780 PF00580 UvrD/REP helicase N-terminal domain NOVO_02790 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NOVO_02805 PF06969 HemN C-terminal domain NOVO_02805 PF04055 Radical SAM superfamily NOVO_02810 PF01029 NusB family NOVO_02830 PF13358 DDE superfamily endonuclease NOVO_02840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NOVO_02840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NOVO_02840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NOVO_02845 PF00483 Nucleotidyl transferase NOVO_02850 PF00471 Ribosomal protein L33 NOVO_02855 PF00886 Ribosomal protein S16 NOVO_02865 PF13358 DDE superfamily endonuclease NOVO_02880 PF08264 Anticodon-binding domain of tRNA NOVO_02880 PF00133 tRNA synthetases class I (I, L, M and V) NOVO_02885 PF00231 ATP synthase NOVO_02890 PF00306 ATP synthase alpha/beta chain, C terminal domain NOVO_02890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NOVO_02890 PF02874 ATP synthase alpha/beta family, beta-barrel domain NOVO_02895 PF00213 ATP synthase delta (OSCP) subunit NOVO_02900 PF00591 Glycosyl transferase family, a/b domain NOVO_02900 PF02885 Glycosyl transferase family, helical bundle domain NOVO_02905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NOVO_02905 PF02542 YgbB family NOVO_02915 PF00430 ATP synthase B/B' CF(0) NOVO_02920 PF00137 ATP synthase subunit C NOVO_02925 PF00119 ATP synthase A chain NOVO_02940 PF01165 Ribosomal protein S21 NOVO_02950 PF01921 tRNA synthetases class I (K) NOVO_02955 PF02600 Disulfide bond formation protein DsbB NOVO_02960 PF03232 Ubiquinone biosynthesis protein COQ7 NOVO_02965 PF00893 Small Multidrug Resistance protein NOVO_02975 PF04333 MlaA lipoprotein NOVO_02995 PF13244 Domain of unknown function (DUF4040) NOVO_02995 PF00361 Proton-conducting membrane transporter NOVO_02995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NOVO_03005 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NOVO_03030 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NOVO_03030 PF00132 Bacterial transferase hexapeptide (six repeats) NOVO_03035 PF07977 FabA-like domain NOVO_03040 PF00132 Bacterial transferase hexapeptide (six repeats) NOVO_03040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NOVO_03045 PF02511 Thymidylate synthase complementing protein NOVO_03050 PF00749 tRNA synthetases class I (E and Q), catalytic domain NOVO_03060 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NOVO_03065 PF02874 ATP synthase alpha/beta family, beta-barrel domain NOVO_03065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NOVO_03075 PF03091 CutA1 divalent ion tolerance protein NOVO_03095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NOVO_03095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NOVO_03110 PF00293 NUDIX domain NOVO_03110 PF01467 Cytidylyltransferase-like NOVO_03130 PF00398 Ribosomal RNA adenine dimethylase NOVO_03140 PF01252 Signal peptidase (SPase) II NOVO_03145 PF01687 Riboflavin kinase NOVO_03145 PF06574 FAD synthetase NOVO_03155 PF01765 Ribosome recycling factor NOVO_03160 PF00696 Amino acid kinase family NOVO_03165 PF00889 Elongation factor TS NOVO_03170 PF00318 Ribosomal protein S2 NOVO_03175 PF01820 D-ala D-ala ligase N-terminus NOVO_03175 PF07478 D-ala D-ala ligase C-terminus NOVO_03180 PF03799 Cell division protein FtsQ NOVO_03180 PF08478 POTRA domain, FtsQ-type NOVO_03185 PF02491 SHS2 domain inserted in FTSA NOVO_03205 PF02705 K+ potassium transporter NOVO_03215 PF13358 DDE superfamily endonuclease NOVO_03230 PF01476 LysM domain NOVO_03230 PF01551 Peptidase family M23 NOVO_03235 PF02405 Permease MlaE NOVO_03240 PF00005 ABC transporter NOVO_03250 PF01227 GTP cyclohydrolase I NOVO_03255 PF00115 Cytochrome C and Quinol oxidase polypeptide I NOVO_03265 PF00155 Aminotransferase class I and II NOVO_03270 PF02628 Cytochrome oxidase assembly protein NOVO_03280 PF08241 Methyltransferase domain NOVO_03305 PF02233 NAD(P) transhydrogenase beta subunit NOVO_03315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NOVO_03315 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NOVO_03325 PF03922 OmpW family NOVO_03330 PF00005 ABC transporter NOVO_03335 PF00528 Binding-protein-dependent transport system inner membrane component NOVO_03340 PF00497 Bacterial extracellular solute-binding proteins, family 3 NOVO_03345 PF01812 5-formyltetrahydrofolate cyclo-ligase family NOVO_03350 PF04607 Region found in RelA / SpoT proteins NOVO_03350 PF13291 ACT domain NOVO_03350 PF02824 TGS domain NOVO_03360 PF00486 Transcriptional regulatory protein, C terminal NOVO_03360 PF00072 Response regulator receiver domain NOVO_03365 PF00925 GTP cyclohydrolase II NOVO_03370 PF04972 BON domain NOVO_03375 PF03631 Virulence factor BrkB NOVO_03380 PF02534 Type IV secretory system Conjugative DNA transfer NOVO_03385 PF00437 Type II/IV secretion system protein NOVO_03390 PF03743 Bacterial conjugation TrbI-like protein NOVO_03400 PF04335 VirB8 protein NOVO_03405 PF03471 Transporter associated domain NOVO_03405 PF00571 CBS domain NOVO_03410 PF02130 Uncharacterized protein family UPF0054 NOVO_03415 PF02562 PhoH-like protein NOVO_03435 PF02096 60Kd inner membrane protein NOVO_03435 PF14849 YidC periplasmic domain NOVO_03440 PF01809 Putative membrane protein insertion efficiency factor NOVO_03445 PF00825 Ribonuclease P NOVO_03450 PF12794 Mechanosensitive ion channel inner membrane domain 1 NOVO_03450 PF12795 Mechanosensitive ion channel porin domain NOVO_03450 PF00924 Mechanosensitive ion channel NOVO_03460 PF13358 DDE superfamily endonuclease NOVO_03480 PF00528 Binding-protein-dependent transport system inner membrane component NOVO_03485 PF00528 Binding-protein-dependent transport system inner membrane component NOVO_03490 PF12857 TOBE-like domain NOVO_03490 PF00005 ABC transporter NOVO_03490 PF17850 CysA C-terminal regulatory domain NOVO_03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NOVO_03505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NOVO_03520 PF00133 tRNA synthetases class I (I, L, M and V) NOVO_03520 PF08264 Anticodon-binding domain of tRNA NOVO_03525 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NOVO_03525 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NOVO_03530 PF17827 PrmC N-terminal domain NOVO_03530 PF05175 Methyltransferase small domain NOVO_03530 PF02390 Putative methyltransferase NOVO_03550 PF03364 Polyketide cyclase / dehydrase and lipid transport NOVO_03555 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NOVO_03555 PF04055 Radical SAM superfamily NOVO_03565 PF09115 DNA polymerase III, delta subunit, C terminal NOVO_03590 PF02875 Mur ligase family, glutamate ligase domain NOVO_03590 PF08245 Mur ligase middle domain NOVO_03595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NOVO_03600 PF00829 Ribosomal prokaryotic L21 protein NOVO_03605 PF01016 Ribosomal L27 protein NOVO_03610 PF00809 Pterin binding enzyme NOVO_03610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NOVO_03615 PF02660 Glycerol-3-phosphate acyltransferase NOVO_03620 PF02618 YceG-like family NOVO_03625 PF02801 Beta-ketoacyl synthase, C-terminal domain NOVO_03625 PF00109 Beta-ketoacyl synthase, N-terminal domain NOVO_03630 PF00550 Phosphopantetheine attachment site NOVO_03640 PF00180 Isocitrate/isopropylmalate dehydrogenase NOVO_03640 PF18324 Hypothetical protein TT1725 NOVO_03645 PF00005 ABC transporter NOVO_03645 PF00664 ABC transporter transmembrane region NOVO_03655 PF00905 Penicillin binding protein transpeptidase domain NOVO_03655 PF00912 Transglycosylase NOVO_03665 PF00990 Diguanylate cyclase, GGDEF domain NOVO_03665 PF17158 Membrane-associated sensor, integral membrane domain NOVO_03670 PF01926 50S ribosome-binding GTPase NOVO_03670 PF01018 GTP1/OBG NOVO_03675 PF00571 CBS domain NOVO_03675 PF01595 Cyclin M transmembrane N-terminal domain NOVO_03675 PF03471 Transporter associated domain NOVO_03680 PF01202 Shikimate kinase NOVO_03685 PF02899 Phage integrase, N-terminal SAM-like domain NOVO_03685 PF00589 Phage integrase family NOVO_03700 PF00814 Glycoprotease family NOVO_03705 PF03922 OmpW family NOVO_03730 PF01544 CorA-like Mg2+ transporter protein NOVO_03740 PF00162 Phosphoglycerate kinase NOVO_03745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NOVO_03745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NOVO_03750 PF00456 Transketolase, thiamine diphosphate binding domain NOVO_03750 PF02780 Transketolase, C-terminal domain NOVO_03750 PF02779 Transketolase, pyrimidine binding domain NOVO_03765 PF01790 Prolipoprotein diacylglyceryl transferase NOVO_03775 PF03807 NADP oxidoreductase coenzyme F420-dependent NOVO_03775 PF14748 Pyrroline-5-carboxylate reductase dimerisation NOVO_03785 PF00072 Response regulator receiver domain NOVO_03785 PF00486 Transcriptional regulatory protein, C terminal NOVO_03820 PF05239 PRC-barrel domain NOVO_03820 PF01782 RimM N-terminal domain NOVO_03830 PF02142 MGS-like domain NOVO_03830 PF01808 AICARFT/IMPCHase bienzyme NOVO_03840 PF02472 Biopolymer transport protein ExbD/TolR NOVO_03845 PF01618 MotA/TolQ/ExbB proton channel family NOVO_03850 PF00005 ABC transporter NOVO_03865 PF01380 SIS domain NOVO_03865 PF00571 CBS domain NOVO_03870 PF00570 HRDC domain NOVO_03870 PF01612 3'-5' exonuclease NOVO_03885 PF04977 Septum formation initiator NOVO_03890 PF00263 Bacterial type II and III secretion system protein NOVO_03890 PF13629 Pilus formation protein N terminal region NOVO_03890 PF04972 BON domain NOVO_03900 PF00334 Nucleoside diphosphate kinase NOVO_03905 PF00583 Acetyltransferase (GNAT) family NOVO_03920 PF00293 NUDIX domain NOVO_03930 PF03572 Peptidase family S41 NOVO_03930 PF13180 PDZ domain NOVO_03935 PF00072 Response regulator receiver domain NOVO_03935 PF00990 Diguanylate cyclase, GGDEF domain NOVO_03945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NOVO_03945 PF00364 Biotin-requiring enzyme NOVO_03945 PF02817 e3 binding domain NOVO_03950 PF02780 Transketolase, C-terminal domain NOVO_03950 PF02779 Transketolase, pyrimidine binding domain NOVO_03955 PF00676 Dehydrogenase E1 component NOVO_03960 PF13520 Amino acid permease NOVO_03965 PF13520 Amino acid permease NOVO_03975 PF00348 Polyprenyl synthetase NOVO_03980 PF00291 Pyridoxal-phosphate dependent enzyme NOVO_03995 PF13358 DDE superfamily endonuclease NOVO_04010 PF13614 AAA domain NOVO_04020 PF08264 Anticodon-binding domain of tRNA NOVO_04020 PF13603 Leucyl-tRNA synthetase, Domain 2 NOVO_04020 PF00133 tRNA synthetases class I (I, L, M and V) NOVO_04035 PF08241 Methyltransferase domain NOVO_04040 PF13144 Chaperone for flagella basal body P-ring formation NOVO_04045 PF02107 Flagellar L-ring protein NOVO_04055 PF17757 UvrB interaction domain NOVO_04055 PF04851 Type III restriction enzyme, res subunit NOVO_04055 PF00271 Helicase conserved C-terminal domain NOVO_04055 PF02151 UvrB/uvrC motif NOVO_04055 PF12344 Ultra-violet resistance protein B NOVO_04080 PF02463 RecF/RecN/SMC N terminal domain NOVO_04085 PF01751 Toprim domain NOVO_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_04085 PF00986 DNA gyrase B subunit, carboxyl terminus NOVO_04085 PF00204 DNA gyrase B NOVO_04090 PF01648 4'-phosphopantetheinyl transferase superfamily NOVO_04095 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NOVO_04100 PF00849 RNA pseudouridylate synthase NOVO_04100 PF01479 S4 domain NOVO_04110 PF10576 Iron-sulfur binding domain of endonuclease III NOVO_04110 PF00730 HhH-GPD superfamily base excision DNA repair protein NOVO_04110 PF00633 Helix-hairpin-helix motif NOVO_04120 PF01259 SAICAR synthetase NOVO_04125 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NOVO_04135 PF02769 AIR synthase related protein, C-terminal domain NOVO_04135 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NOVO_04135 PF00586 AIR synthase related protein, N-terminal domain NOVO_04140 PF13439 Glycosyltransferase Family 4 NOVO_04140 PF00534 Glycosyl transferases group 1 NOVO_04150 PF02272 DHHA1 domain NOVO_04150 PF01368 DHH family NOVO_04150 PF17768 RecJ OB domain NOVO_04150 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NOVO_04155 PF13335 Magnesium chelatase, subunit ChlI C-terminal NOVO_04155 PF01078 Magnesium chelatase, subunit ChlI NOVO_04160 PF00572 Ribosomal protein L13 NOVO_04165 PF00380 Ribosomal protein S9/S16 NOVO_04170 PF00117 Glutamine amidotransferase class-I NOVO_04170 PF00958 GMP synthase C terminal domain NOVO_04170 PF02540 NAD synthase NOVO_04175 PF12327 FtsZ family, C-terminal domain NOVO_04175 PF00091 Tubulin/FtsZ family, GTPase domain NOVO_04180 PF02021 Uncharacterised protein family UPF0102 NOVO_04200 PF01979 Amidohydrolase family NOVO_04210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NOVO_04230 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NOVO_04230 PF01243 Pyridoxamine 5'-phosphate oxidase NOVO_04235 PF03739 Lipopolysaccharide export system permease LptF/LptG NOVO_04245 PF17864 RuvB AAA lid domain NOVO_04245 PF05491 RuvB C-terminal winged helix domain NOVO_04245 PF05496 Holliday junction DNA helicase RuvB P-loop domain NOVO_04250 PF07499 RuvA, C-terminal domain NOVO_04250 PF01330 RuvA N terminal domain NOVO_04255 PF02075 Crossover junction endodeoxyribonuclease RuvC NOVO_04260 PF01709 Transcriptional regulator NOVO_04265 PF02545 Maf-like protein NOVO_04270 PF01176 Translation initiation factor 1A / IF-1 NOVO_04280 PF02195 ParB-like nuclease domain NOVO_04280 PF17762 HTH domain found in ParB protein NOVO_04285 PF13614 AAA domain NOVO_04290 PF02527 rRNA small subunit methyltransferase G NOVO_04295 PF13932 GidA associated domain NOVO_04295 PF01134 Glucose inhibited division protein A NOVO_04300 PF00535 Glycosyl transferase family 2 NOVO_04305 PF00534 Glycosyl transferases group 1 NOVO_04305 PF13439 Glycosyltransferase Family 4 NOVO_04320 PF01578 Cytochrome C assembly protein NOVO_04325 PF11953 Domain of unknown function (DUF3470) NOVO_04325 PF00037 4Fe-4S binding domain NOVO_04335 PF03702 Anhydro-N-acetylmuramic acid kinase NOVO_04355 PF00809 Pterin binding enzyme NOVO_04355 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NOVO_04365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NOVO_04365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NOVO_04370 PF02504 Fatty acid synthesis protein NOVO_04375 PF01783 Ribosomal L32p protein family NOVO_04385 PF00227 Proteasome subunit NOVO_04390 PF10431 C-terminal, D2-small domain, of ClpB protein NOVO_04390 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_04390 PF07724 AAA domain (Cdc48 subfamily) NOVO_04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_04400 PF00989 PAS fold NOVO_04400 PF00512 His Kinase A (phospho-acceptor) domain NOVO_04405 PF00072 Response regulator receiver domain NOVO_04415 PF03099 Biotin/lipoate A/B protein ligase family NOVO_04425 PF07676 WD40-like Beta Propeller Repeat NOVO_04425 PF04052 TolB amino-terminal domain NOVO_04435 PF00691 OmpA family NOVO_04445 PF00551 Formyl transferase NOVO_04445 PF02911 Formyl transferase, C-terminal domain NOVO_04450 PF01327 Polypeptide deformylase NOVO_04455 PF07690 Major Facilitator Superfamily NOVO_04460 PF01810 LysE type translocator NOVO_04465 PF13085 2Fe-2S iron-sulfur cluster binding domain NOVO_04470 PF02910 Fumarate reductase flavoprotein C-term NOVO_04470 PF00890 FAD binding domain NOVO_04480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NOVO_04485 PF12804 MobA-like NTP transferase domain NOVO_04500 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NOVO_04505 PF00672 HAMP domain NOVO_04505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NOVO_04505 PF12729 Four helix bundle sensory module for signal transduction NOVO_04520 PF02556 Preprotein translocase subunit SecB NOVO_04540 PF00462 Glutaredoxin NOVO_04545 PF04397 LytTr DNA-binding domain NOVO_04545 PF00072 Response regulator receiver domain NOVO_04560 PF00929 Exonuclease NOVO_04565 PF01121 Dephospho-CoA kinase NOVO_04570 PF03618 Kinase/pyrophosphorylase NOVO_04575 PF01208 Uroporphyrinogen decarboxylase (URO-D) NOVO_04580 PF00762 Ferrochelatase NOVO_04590 PF07498 Rho termination factor, N-terminal domain NOVO_04590 PF07497 Rho termination factor, RNA-binding domain NOVO_04590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NOVO_04595 PF00056 lactate/malate dehydrogenase, NAD binding domain NOVO_04595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NOVO_04600 PF08442 ATP-grasp domain NOVO_04600 PF00549 CoA-ligase NOVO_04605 PF02629 CoA binding domain NOVO_04605 PF00549 CoA-ligase NOVO_04610 PF16078 2-oxoglutarate dehydrogenase N-terminus NOVO_04610 PF00676 Dehydrogenase E1 component NOVO_04610 PF16870 2-oxoglutarate dehydrogenase C-terminal NOVO_04610 PF02779 Transketolase, pyrimidine binding domain NOVO_04615 PF02817 e3 binding domain NOVO_04615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NOVO_04615 PF00364 Biotin-requiring enzyme NOVO_04620 PF07992 Pyridine nucleotide-disulphide oxidoreductase NOVO_04620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NOVO_04625 PF00830 Ribosomal L28 family NOVO_04630 PF01197 Ribosomal protein L31 NOVO_04645 PF00075 RNase H NOVO_04650 PF00579 tRNA synthetases class I (W and Y) NOVO_04675 PF01702 Queuine tRNA-ribosyltransferase NOVO_04690 PF13358 DDE superfamily endonuclease NOVO_04700 PF03601 Conserved hypothetical protein 698 NOVO_04705 PF08173 Membrane bound YbgT-like protein NOVO_04710 PF02322 Cytochrome bd terminal oxidase subunit II NOVO_04715 PF01654 Cytochrome bd terminal oxidase subunit I NOVO_04740 PF16363 GDP-mannose 4,6 dehydratase NOVO_04745 PF00342 Phosphoglucose isomerase NOVO_04750 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NOVO_04755 PF01728 FtsJ-like methyltransferase NOVO_04760 PF06258 Mitochondrial fission ELM1 NOVO_04775 PF02773 S-adenosylmethionine synthetase, C-terminal domain NOVO_04775 PF02772 S-adenosylmethionine synthetase, central domain NOVO_04775 PF00438 S-adenosylmethionine synthetase, N-terminal domain NOVO_04800 PF01479 S4 domain NOVO_04800 PF00579 tRNA synthetases class I (W and Y) NOVO_04805 PF02609 Exonuclease VII small subunit NOVO_04830 PF03070 TENA/THI-4/PQQC family NOVO_04860 PF00535 Glycosyl transferase family 2 NOVO_04870 PF00472 RF-1 domain NOVO_04870 PF03462 PCRF domain NOVO_04875 PF01106 NifU-like domain NOVO_04895 PF01040 UbiA prenyltransferase family NOVO_04915 PF03918 Cytochrome C biogenesis protein NOVO_04920 PF08534 Redoxin NOVO_04925 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NOVO_04925 PF01578 Cytochrome C assembly protein NOVO_04940 PF00483 Nucleotidyl transferase NOVO_04940 PF01050 Mannose-6-phosphate isomerase NOVO_04945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NOVO_04945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NOVO_04945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NOVO_04945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NOVO_04950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NOVO_04950 PF00529 HlyD membrane-fusion protein of T1SS NOVO_04955 PF00005 ABC transporter NOVO_04955 PF00664 ABC transporter transmembrane region NOVO_04965 PF00719 Inorganic pyrophosphatase NOVO_04970 PF00923 Transaldolase/Fructose-6-phosphate aldolase NOVO_04975 PF01250 Ribosomal protein S6 NOVO_04980 PF01084 Ribosomal protein S18 NOVO_04985 PF03948 Ribosomal protein L9, C-terminal domain NOVO_04985 PF01281 Ribosomal protein L9, N-terminal domain NOVO_04995 PF01230 HIT domain NOVO_05000 PF01416 tRNA pseudouridine synthase NOVO_05010 PF04932 O-Antigen ligase NOVO_05015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NOVO_05015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NOVO_05020 PF01627 Hpt domain NOVO_05020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NOVO_05020 PF00512 His Kinase A (phospho-acceptor) domain NOVO_05020 PF00072 Response regulator receiver domain NOVO_05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_05020 PF00672 HAMP domain NOVO_05025 PF00360 Phytochrome region NOVO_05025 PF08446 PAS fold NOVO_05025 PF00512 His Kinase A (phospho-acceptor) domain NOVO_05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_05025 PF01590 GAF domain NOVO_05030 PF02954 Bacterial regulatory protein, Fis family NOVO_05030 PF00072 Response regulator receiver domain NOVO_05030 PF00158 Sigma-54 interaction domain NOVO_05035 PF01171 PP-loop family NOVO_05040 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_05040 PF17862 AAA+ lid domain NOVO_05040 PF06480 FtsH Extracellular NOVO_05040 PF01434 Peptidase family M41 NOVO_05045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NOVO_05045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NOVO_05045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NOVO_05045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NOVO_05050 PF01113 Dihydrodipicolinate reductase, N-terminus NOVO_05050 PF05173 Dihydrodipicolinate reductase, C-terminus NOVO_05055 PF10947 Protein of unknown function (DUF2628) NOVO_05060 PF01571 Aminomethyltransferase folate-binding domain NOVO_05060 PF08669 Glycine cleavage T-protein C-terminal barrel domain NOVO_05075 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NOVO_05080 PF02082 Transcriptional regulator NOVO_05085 PF00266 Aminotransferase class-V NOVO_05090 PF00266 Aminotransferase class-V NOVO_05095 PF01592 NifU-like N terminal domain NOVO_05100 PF01521 Iron-sulphur cluster biosynthesis NOVO_05105 PF07743 HSCB C-terminal oligomerisation domain NOVO_05105 PF00226 DnaJ domain NOVO_05110 PF00012 Hsp70 protein NOVO_05115 PF00111 2Fe-2S iron-sulfur cluster binding domain NOVO_05130 PF02416 mttA/Hcf106 family NOVO_05135 PF17092 Penicillin-binding protein OB-like domain NOVO_05135 PF00905 Penicillin binding protein transpeptidase domain NOVO_05135 PF00912 Transglycosylase NOVO_05140 PF00534 Glycosyl transferases group 1 NOVO_05140 PF08323 Starch synthase catalytic domain NOVO_05155 PF00958 GMP synthase C terminal domain NOVO_05155 PF13673 Acetyltransferase (GNAT) domain NOVO_05155 PF13302 Acetyltransferase (GNAT) domain NOVO_05155 PF03352 Methyladenine glycosylase NOVO_05155 PF00117 Glutamine amidotransferase class-I NOVO_05165 PF00709 Adenylosuccinate synthetase NOVO_05175 PF01523 Putative modulator of DNA gyrase NOVO_05180 PF00664 ABC transporter transmembrane region NOVO_05180 PF00005 ABC transporter NOVO_05185 PF00478 IMP dehydrogenase / GMP reductase domain NOVO_05185 PF00571 CBS domain NOVO_05190 PF02230 Phospholipase/Carboxylesterase NOVO_05195 PF02686 Glu-tRNAGln amidotransferase C subunit NOVO_05200 PF01425 Amidase NOVO_05205 PF02637 GatB domain NOVO_05205 PF02934 GatB/GatE catalytic domain NOVO_05215 PF00672 HAMP domain NOVO_05215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NOVO_05230 PF00775 Dioxygenase NOVO_05235 PF02705 K+ potassium transporter NOVO_05240 PF13358 DDE superfamily endonuclease NOVO_05260 PF00202 Aminotransferase class-III NOVO_05265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NOVO_05275 PF01706 FliG C-terminal domain NOVO_05275 PF14841 FliG middle domain NOVO_05275 PF14842 FliG N-terminal domain NOVO_05280 PF01514 Secretory protein of YscJ/FliF family NOVO_05280 PF08345 Flagellar M-ring protein C-terminal NOVO_05290 PF12804 MobA-like NTP transferase domain NOVO_05290 PF00132 Bacterial transferase hexapeptide (six repeats) NOVO_05300 PF02646 RmuC family NOVO_05310 PF01218 Coproporphyrinogen III oxidase NOVO_05315 PF05233 PHB accumulation regulatory domain NOVO_05315 PF07879 PHB/PHA accumulation regulator DNA-binding domain NOVO_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_05320 PF00512 His Kinase A (phospho-acceptor) domain NOVO_05320 PF00989 PAS fold NOVO_05320 PF13188 PAS domain NOVO_05365 PF10396 GTP-binding protein TrmE N-terminus NOVO_05365 PF12631 MnmE helical domain NOVO_05365 PF01926 50S ribosome-binding GTPase NOVO_05370 PF05088 Bacterial NAD-glutamate dehydrogenase NOVO_05385 PF00083 Sugar (and other) transporter NOVO_05385 PF08946 Osmosensory transporter coiled coil NOVO_05390 PF01546 Peptidase family M20/M25/M40 NOVO_05390 PF07687 Peptidase dimerisation domain NOVO_05395 PF00132 Bacterial transferase hexapeptide (six repeats) NOVO_05395 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NOVO_05395 PF14602 Hexapeptide repeat of succinyl-transferase NOVO_05400 PF13717 zinc-ribbon domain NOVO_05405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NOVO_05405 PF00529 HlyD membrane-fusion protein of T1SS NOVO_05430 PF00005 ABC transporter NOVO_05430 PF06472 ABC transporter transmembrane region 2 NOVO_05455 PF07690 Major Facilitator Superfamily NOVO_05485 PF13358 DDE superfamily endonuclease NOVO_05530 PF01427 D-ala-D-ala dipeptidase NOVO_05540 PF04453 LPS transport system D NOVO_05540 PF03968 OstA-like protein NOVO_05550 PF01207 Dihydrouridine synthase (Dus) NOVO_05560 PF17871 AAA lid domain NOVO_05560 PF02861 Clp amino terminal domain, pathogenicity island component NOVO_05560 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_05560 PF10431 C-terminal, D2-small domain, of ClpB protein NOVO_05560 PF07724 AAA domain (Cdc48 subfamily) NOVO_05580 PF10609 NUBPL iron-transfer P-loop NTPase NOVO_05585 PF01145 SPFH domain / Band 7 family NOVO_05585 PF12221 Bacterial membrane protein N terminal NOVO_05590 PF01145 SPFH domain / Band 7 family NOVO_05595 PF13180 PDZ domain NOVO_05625 PF00106 short chain dehydrogenase NOVO_05630 PF13537 Glutamine amidotransferase domain NOVO_05630 PF00156 Phosphoribosyl transferase domain NOVO_05640 PF03641 Possible lysine decarboxylase NOVO_05645 PF02666 Phosphatidylserine decarboxylase NOVO_05650 PF01066 CDP-alcohol phosphatidyltransferase NOVO_05675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NOVO_05675 PF01411 tRNA synthetases class II (A) NOVO_05675 PF02272 DHHA1 domain NOVO_05685 PF01476 LysM domain NOVO_05685 PF01551 Peptidase family M23 NOVO_05710 PF01494 FAD binding domain NOVO_05720 PF13426 PAS domain NOVO_05720 PF00512 His Kinase A (phospho-acceptor) domain NOVO_05720 PF00672 HAMP domain NOVO_05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_05755 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NOVO_05755 PF00561 alpha/beta hydrolase fold NOVO_05760 PF02401 LytB protein NOVO_05775 PF00814 Glycoprotease family NOVO_05780 PF01144 Coenzyme A transferase NOVO_05785 PF01144 Coenzyme A transferase NOVO_05790 PF08019 Phosphoethanolamine transferase EptA/EptB NOVO_05790 PF00884 Sulfatase NOVO_05800 PF00069 Protein kinase domain NOVO_05800 PF03793 PASTA domain NOVO_05820 PF02861 Clp amino terminal domain, pathogenicity island component NOVO_05820 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_05820 PF10431 C-terminal, D2-small domain, of ClpB protein NOVO_05820 PF17871 AAA lid domain NOVO_05820 PF07724 AAA domain (Cdc48 subfamily) NOVO_05835 PF14437 MafB19-like deaminase NOVO_05840 PF16916 Dimerisation domain of Zinc Transporter NOVO_05840 PF01545 Cation efflux family NOVO_05845 PF16998 17 kDa outer membrane surface antigen NOVO_05845 PF05433 Glycine zipper 2TM domain NOVO_05860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NOVO_05860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NOVO_05870 PF00108 Thiolase, N-terminal domain NOVO_05870 PF02803 Thiolase, C-terminal domain NOVO_05880 PF03330 Lytic transglycolase NOVO_05885 PF07992 Pyridine nucleotide-disulphide oxidoreductase NOVO_05890 PF00113 Enolase, C-terminal TIM barrel domain NOVO_05890 PF03952 Enolase, N-terminal domain NOVO_05900 PF00444 Ribosomal protein L36 NOVO_05905 PF01380 SIS domain NOVO_05910 PF00580 UvrD/REP helicase N-terminal domain NOVO_05910 PF13361 UvrD-like helicase C-terminal domain NOVO_05915 PF00490 Delta-aminolevulinic acid dehydratase NOVO_05930 PF01523 Putative modulator of DNA gyrase NOVO_05935 PF00005 ABC transporter NOVO_05935 PF00664 ABC transporter transmembrane region NOVO_05940 PF00578 AhpC/TSA family NOVO_05950 PF04551 GcpE protein NOVO_05960 PF00132 Bacterial transferase hexapeptide (six repeats) NOVO_05965 PF00953 Glycosyl transferase family 4 NOVO_05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_05970 PF00512 His Kinase A (phospho-acceptor) domain NOVO_05970 PF16736 Single Cache-like NOVO_05970 PF00989 PAS fold NOVO_05980 PF13358 DDE superfamily endonuclease NOVO_06005 PF13358 DDE superfamily endonuclease NOVO_06015 PF02104 SURF1 family NOVO_06025 PF13358 DDE superfamily endonuclease NOVO_06045 PF04452 RNA methyltransferase NOVO_06050 PF17191 RecG wedge domain NOVO_06050 PF00270 DEAD/DEAH box helicase NOVO_06050 PF00271 Helicase conserved C-terminal domain NOVO_06060 PF13677 Membrane MotB of proton-channel complex MotA/MotB NOVO_06060 PF00691 OmpA family NOVO_06065 PF01618 MotA/TolQ/ExbB proton channel family NOVO_06070 PF01613 Flavin reductase like domain NOVO_06075 PF01926 50S ribosome-binding GTPase NOVO_06080 PF00588 SpoU rRNA Methylase family NOVO_06080 PF08032 RNA 2'-O ribose methyltransferase substrate binding NOVO_06095 PF03143 Elongation factor Tu C-terminal domain NOVO_06095 PF03144 Elongation factor Tu domain 2 NOVO_06095 PF00009 Elongation factor Tu GTP binding domain NOVO_06100 PF00338 Ribosomal protein S10p/S20e NOVO_06105 PF00297 Ribosomal protein L3 NOVO_06110 PF00573 Ribosomal protein L4/L1 family NOVO_06115 PF00276 Ribosomal protein L23 NOVO_06120 PF03947 Ribosomal Proteins L2, C-terminal domain NOVO_06120 PF00181 Ribosomal Proteins L2, RNA binding domain NOVO_06125 PF00203 Ribosomal protein S19 NOVO_06130 PF00237 Ribosomal protein L22p/L17e NOVO_06135 PF00189 Ribosomal protein S3, C-terminal domain NOVO_06135 PF07650 KH domain NOVO_06140 PF00252 Ribosomal protein L16p/L10e NOVO_06145 PF00831 Ribosomal L29 protein NOVO_06150 PF00366 Ribosomal protein S17 NOVO_06155 PF00238 Ribosomal protein L14p/L23e NOVO_06160 PF00467 KOW motif NOVO_06160 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NOVO_06165 PF00281 Ribosomal protein L5 NOVO_06165 PF00673 ribosomal L5P family C-terminus NOVO_06170 PF00253 Ribosomal protein S14p/S29e NOVO_06175 PF00410 Ribosomal protein S8 NOVO_06180 PF00347 Ribosomal protein L6 NOVO_06185 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NOVO_06190 PF00333 Ribosomal protein S5, N-terminal domain NOVO_06190 PF03719 Ribosomal protein S5, C-terminal domain NOVO_06195 PF00327 Ribosomal protein L30p/L7e NOVO_06200 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NOVO_06205 PF00344 SecY translocase NOVO_06210 PF05191 Adenylate kinase, active site lid NOVO_06215 PF00416 Ribosomal protein S13/S18 NOVO_06220 PF00411 Ribosomal protein S11 NOVO_06225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NOVO_06225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NOVO_06225 PF01000 RNA polymerase Rpb3/RpoA insert domain NOVO_06230 PF01196 Ribosomal protein L17 NOVO_06235 PF00892 EamA-like transporter family NOVO_06245 PF13473 Cupredoxin-like domain NOVO_06250 PF05198 Translation initiation factor IF-3, N-terminal domain NOVO_06250 PF00707 Translation initiation factor IF-3, C-terminal domain NOVO_06260 PF00571 CBS domain NOVO_06260 PF03448 MgtE intracellular N domain NOVO_06260 PF01769 Divalent cation transporter NOVO_06285 PF13358 DDE superfamily endonuclease NOVO_06295 PF00183 Hsp90 protein NOVO_06325 PF06314 Acetoacetate decarboxylase (ADC) NOVO_06330 PF13426 PAS domain NOVO_06330 PF00672 HAMP domain NOVO_06330 PF00512 His Kinase A (phospho-acceptor) domain NOVO_06330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_06375 PF06968 Biotin and Thiamin Synthesis associated domain NOVO_06375 PF04055 Radical SAM superfamily NOVO_06380 PF00884 Sulfatase NOVO_06380 PF08019 Phosphoethanolamine transferase EptA/EptB NOVO_06400 PF03652 Holliday junction resolvase NOVO_06405 PF00005 ABC transporter NOVO_06410 PF01926 50S ribosome-binding GTPase NOVO_06410 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NOVO_06415 PF13360 PQQ-like domain NOVO_06415 PF01011 PQQ enzyme repeat NOVO_06425 PF08264 Anticodon-binding domain of tRNA NOVO_06425 PF09334 tRNA synthetases class I (M) NOVO_06430 PF01026 TatD related DNase NOVO_06435 PF01725 Ham1 family NOVO_06440 PF01138 3' exoribonuclease family, domain 1 NOVO_06440 PF03725 3' exoribonuclease family, domain 2 NOVO_06445 PF01025 GrpE NOVO_06450 PF00793 DAHP synthetase I family NOVO_06455 PF01521 Iron-sulphur cluster biosynthesis NOVO_06485 PF08544 GHMP kinases C terminal NOVO_06485 PF00288 GHMP kinases N terminal domain NOVO_06490 PF03524 Conjugal transfer protein NOVO_06500 PF10415 Fumarase C C-terminus NOVO_06500 PF00206 Lyase NOVO_06505 PF03705 CheR methyltransferase, all-alpha domain NOVO_06505 PF01739 CheR methyltransferase, SAM binding domain NOVO_06510 PF00072 Response regulator receiver domain NOVO_06510 PF01339 CheB methylesterase NOVO_06520 PF01584 CheW-like domain NOVO_06525 PF01627 Hpt domain NOVO_06525 PF01584 CheW-like domain NOVO_06525 PF02895 Signal transducing histidine kinase, homodimeric domain NOVO_06525 PF07194 P2 response regulator binding domain NOVO_06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_06550 PF13662 Toprim domain NOVO_06550 PF01807 CHC2 zinc finger NOVO_06550 PF08275 DNA primase catalytic core, N-terminal domain NOVO_06555 PF04545 Sigma-70, region 4 NOVO_06555 PF04546 Sigma-70, non-essential region NOVO_06555 PF03979 Sigma-70 factor, region 1.1 NOVO_06555 PF04539 Sigma-70 region 3 NOVO_06555 PF00140 Sigma-70 factor, region 1.2 NOVO_06555 PF04542 Sigma-70 region 2 NOVO_06570 PF02559 CarD-like/TRCF domain NOVO_06575 PF00120 Glutamine synthetase, catalytic domain NOVO_06575 PF03951 Glutamine synthetase, beta-Grasp domain NOVO_06600 PF10397 Adenylosuccinate lyase C-terminus NOVO_06600 PF00206 Lyase NOVO_06605 PF00459 Inositol monophosphatase family NOVO_06610 PF02565 Recombination protein O C terminal NOVO_06610 PF11967 Recombination protein O N terminal NOVO_06615 PF01722 BolA-like protein NOVO_06620 PF00696 Amino acid kinase family NOVO_06620 PF01842 ACT domain NOVO_06620 PF13840 ACT domain NOVO_06635 PF01738 Dienelactone hydrolase family NOVO_06635 PF00156 Phosphoribosyl transferase domain NOVO_06660 PF08241 Methyltransferase domain NOVO_06670 PF08241 Methyltransferase domain NOVO_06680 PF00672 HAMP domain NOVO_06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_06680 PF13426 PAS domain NOVO_06680 PF00512 His Kinase A (phospho-acceptor) domain NOVO_06700 PF13358 DDE superfamily endonuclease NOVO_06715 PF01596 O-methyltransferase NOVO_06720 PF00625 Guanylate kinase NOVO_06725 PF00106 short chain dehydrogenase NOVO_06740 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NOVO_06740 PF00561 alpha/beta hydrolase fold NOVO_06745 PF00072 Response regulator receiver domain NOVO_06745 PF00486 Transcriptional regulatory protein, C terminal NOVO_06750 PF02132 RecR protein NOVO_06750 PF13662 Toprim domain NOVO_06755 PF02575 YbaB/EbfC DNA-binding family NOVO_06760 PF12169 DNA polymerase III subunits gamma and tau domain III NOVO_06760 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NOVO_06760 PF12170 DNA polymerase III tau subunit V interacting with alpha NOVO_06785 PF09190 DALR domain NOVO_06785 PF01406 tRNA synthetases class I (C) catalytic domain NOVO_06790 PF00588 SpoU rRNA Methylase family NOVO_06805 PF00933 Glycosyl hydrolase family 3 N terminal domain NOVO_06825 PF13358 DDE superfamily endonuclease NOVO_06850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NOVO_06850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NOVO_06850 PF02824 TGS domain NOVO_06850 PF03129 Anticodon binding domain NOVO_06865 PF06965 Na+/H+ antiporter 1 NOVO_06865 PF01343 Peptidase family S49 NOVO_06870 PF02091 Glycyl-tRNA synthetase alpha subunit NOVO_06875 PF05746 DALR anticodon binding domain NOVO_06875 PF02092 Glycyl-tRNA synthetase beta subunit NOVO_06880 PF00391 PEP-utilising enzyme, mobile domain NOVO_06880 PF02896 PEP-utilising enzyme, TIM barrel domain NOVO_06880 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NOVO_06885 PF00158 Sigma-54 interaction domain NOVO_06885 PF02954 Bacterial regulatory protein, Fis family NOVO_06890 PF01255 Putative undecaprenyl diphosphate synthase NOVO_06905 PF03023 Lipid II flippase MurJ NOVO_06920 PF00768 D-alanyl-D-alanine carboxypeptidase NOVO_06920 PF07943 Penicillin-binding protein 5, C-terminal domain NOVO_06925 PF07943 Penicillin-binding protein 5, C-terminal domain NOVO_06925 PF00768 D-alanyl-D-alanine carboxypeptidase NOVO_06930 PF07690 Major Facilitator Superfamily NOVO_06935 PF07690 Major Facilitator Superfamily NOVO_06940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NOVO_06940 PF00529 HlyD membrane-fusion protein of T1SS NOVO_06950 PF00528 Binding-protein-dependent transport system inner membrane component NOVO_06955 PF00528 Binding-protein-dependent transport system inner membrane component NOVO_06960 PF02016 LD-carboxypeptidase N-terminal domain NOVO_06960 PF17676 LD-carboxypeptidase C-terminal domain NOVO_06965 PF00005 ABC transporter NOVO_06970 PF00486 Transcriptional regulatory protein, C terminal NOVO_06970 PF00072 Response regulator receiver domain NOVO_06975 PF00462 Glutaredoxin NOVO_06980 PF01722 BolA-like protein NOVO_06990 PF13525 Outer membrane lipoprotein NOVO_06995 PF02463 RecF/RecN/SMC N terminal domain NOVO_07000 PF07724 AAA domain (Cdc48 subfamily) NOVO_07000 PF10431 C-terminal, D2-small domain, of ClpB protein NOVO_07000 PF06689 ClpX C4-type zinc finger NOVO_07005 PF00574 Clp protease NOVO_07010 PF00120 Glutamine synthetase, catalytic domain NOVO_07010 PF03951 Glutamine synthetase, beta-Grasp domain NOVO_07030 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NOVO_07030 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NOVO_07035 PF00115 Cytochrome C and Quinol oxidase polypeptide I NOVO_07040 PF00679 Elongation factor G C-terminus NOVO_07040 PF00009 Elongation factor Tu GTP binding domain NOVO_07040 PF03144 Elongation factor Tu domain 2 NOVO_07040 PF06421 GTP-binding protein LepA C-terminus NOVO_07060 PF03060 Nitronate monooxygenase NOVO_07065 PF03461 TRCF domain NOVO_07065 PF00270 DEAD/DEAH box helicase NOVO_07065 PF17757 UvrB interaction domain NOVO_07065 PF02559 CarD-like/TRCF domain NOVO_07065 PF00271 Helicase conserved C-terminal domain NOVO_07075 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_07075 PF05362 Lon protease (S16) C-terminal proteolytic domain NOVO_07075 PF02190 ATP-dependent protease La (LON) substrate-binding domain NOVO_07080 PF00216 Bacterial DNA-binding protein NOVO_07090 PF02810 SEC-C motif NOVO_07090 PF07517 SecA DEAD-like domain NOVO_07090 PF07516 SecA Wing and Scaffold domain NOVO_07090 PF01043 SecA preprotein cross-linking domain NOVO_07105 PF00005 ABC transporter NOVO_07105 PF12848 ABC transporter NOVO_07115 PF13358 DDE superfamily endonuclease NOVO_07130 PF00849 RNA pseudouridylate synthase NOVO_07135 PF03167 Uracil DNA glycosylase superfamily NOVO_07140 PF01180 Dihydroorotate dehydrogenase NOVO_07145 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NOVO_07145 PF02222 ATP-grasp domain NOVO_07150 PF00731 AIR carboxylase NOVO_07170 PF00795 Carbon-nitrogen hydrolase NOVO_07175 PF00692 dUTPase NOVO_07190 PF01926 50S ribosome-binding GTPase NOVO_07190 PF07650 KH domain NOVO_07210 PF13358 DDE superfamily endonuclease NOVO_07225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NOVO_07225 PF02874 ATP synthase alpha/beta family, beta-barrel domain NOVO_07225 PF18269 T3SS EscN ATPase C-terminal domain NOVO_07235 PF14572 Phosphoribosyl synthetase-associated domain NOVO_07235 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NOVO_07240 PF01386 Ribosomal L25p family NOVO_07240 PF14693 Ribosomal protein TL5, C-terminal domain NOVO_07245 PF01195 Peptidyl-tRNA hydrolase NOVO_07250 PF01479 S4 domain NOVO_07250 PF00163 Ribosomal protein S4/S9 N-terminal domain NOVO_07270 PF02780 Transketolase, C-terminal domain NOVO_07270 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NOVO_07270 PF02779 Transketolase, pyrimidine binding domain NOVO_07280 PF03135 CagE, TrbE, VirB family, component of type IV transporter system NOVO_07285 PF04610 TrbL/VirB6 plasmid conjugal transfer protein NOVO_07290 PF04610 TrbL/VirB6 plasmid conjugal transfer protein NOVO_07295 PF04610 TrbL/VirB6 plasmid conjugal transfer protein NOVO_07305 PF04610 TrbL/VirB6 plasmid conjugal transfer protein NOVO_07310 PF04610 TrbL/VirB6 plasmid conjugal transfer protein NOVO_07325 PF00361 Proton-conducting membrane transporter NOVO_07330 PF13244 Domain of unknown function (DUF4040) NOVO_07330 PF00361 Proton-conducting membrane transporter NOVO_07330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NOVO_07345 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NOVO_07355 PF01510 N-acetylmuramoyl-L-alanine amidase NOVO_07365 PF13358 DDE superfamily endonuclease NOVO_07385 PF00154 recA bacterial DNA recombination protein NOVO_07390 PF17760 UvrA interaction domain NOVO_07390 PF17755 UvrA DNA-binding domain NOVO_07395 PF00436 Single-strand binding protein family NOVO_07400 PF03883 Peroxide stress protein YaaA NOVO_07425 PF00672 HAMP domain NOVO_07425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07425 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07425 PF13426 PAS domain NOVO_07430 PF04480 Protein of unknown function (DUF559) NOVO_07435 PF07196 Flagellin hook IN motif NOVO_07435 PF00700 Bacterial flagellin C-terminal helical region NOVO_07435 PF00669 Bacterial flagellin N-terminal helical region NOVO_07460 PF00924 Mechanosensitive ion channel NOVO_07470 PF00106 short chain dehydrogenase NOVO_07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07480 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07480 PF00989 PAS fold NOVO_07485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NOVO_07485 PF02785 Biotin carboxylase C-terminal domain NOVO_07485 PF00289 Biotin carboxylase, N-terminal domain NOVO_07490 PF01039 Carboxyl transferase domain NOVO_07495 PF03009 Glycerophosphoryl diester phosphodiesterase family NOVO_07500 PF00586 AIR synthase related protein, N-terminal domain NOVO_07500 PF02769 AIR synthase related protein, C-terminal domain NOVO_07535 PF13358 DDE superfamily endonuclease NOVO_07540 PF01471 Putative peptidoglycan binding domain NOVO_07540 PF01183 Glycosyl hydrolases family 25 NOVO_07545 PF04860 Phage portal protein NOVO_07555 PF00563 EAL domain NOVO_07555 PF05231 MASE1 NOVO_07565 PF00749 tRNA synthetases class I (E and Q), catalytic domain NOVO_07575 PF01311 Bacterial export proteins, family 1 NOVO_07580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NOVO_07580 PF06827 Zinc finger found in FPG and IleRS NOVO_07580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NOVO_07625 PF02622 Uncharacterized ACR, COG1678 NOVO_07630 PF13098 Thioredoxin-like domain NOVO_07630 PF11412 Disulphide bond corrector protein DsbC NOVO_07630 PF02683 Cytochrome C biogenesis protein transmembrane region NOVO_07635 PF02881 SRP54-type protein, helical bundle domain NOVO_07635 PF00448 SRP54-type protein, GTPase domain NOVO_07635 PF02978 Signal peptide binding domain NOVO_07650 PF13091 PLD-like domain NOVO_07670 PF01258 Prokaryotic dksA/traR C4-type zinc finger NOVO_07675 PF03462 PCRF domain NOVO_07675 PF00472 RF-1 domain NOVO_07685 PF03949 Malic enzyme, NAD binding domain NOVO_07685 PF00390 Malic enzyme, N-terminal domain NOVO_07695 PF05746 DALR anticodon binding domain NOVO_07695 PF03485 Arginyl tRNA synthetase N terminal domain NOVO_07695 PF00750 tRNA synthetases class I (R) NOVO_07700 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_07700 PF16193 AAA C-terminal domain NOVO_07700 PF12002 MgsA AAA+ ATPase C terminal NOVO_07710 PF13358 DDE superfamily endonuclease NOVO_07730 PF13358 DDE superfamily endonuclease NOVO_07745 PF00072 Response regulator receiver domain NOVO_07750 PF00072 Response regulator receiver domain NOVO_07750 PF08448 PAS fold NOVO_07750 PF13188 PAS domain NOVO_07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07750 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07760 PF13426 PAS domain NOVO_07760 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07760 PF00672 HAMP domain NOVO_07760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07770 PF03301 Tryptophan 2,3-dioxygenase NOVO_07780 PF00672 HAMP domain NOVO_07780 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07780 PF13426 PAS domain NOVO_07780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07785 PF00027 Cyclic nucleotide-binding domain NOVO_07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07795 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07795 PF13426 PAS domain NOVO_07795 PF00672 HAMP domain NOVO_07815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07815 PF00672 HAMP domain NOVO_07865 PF00672 HAMP domain NOVO_07865 PF13426 PAS domain NOVO_07865 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07870 PF00144 Beta-lactamase NOVO_07895 PF13358 DDE superfamily endonuclease NOVO_07910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NOVO_07910 PF05697 Bacterial trigger factor protein (TF) NOVO_07910 PF05698 Bacterial trigger factor protein (TF) C-terminus NOVO_07920 PF12627 Probable RNA and SrmB- binding site of polymerase A NOVO_07920 PF13735 tRNA nucleotidyltransferase domain 2 putative NOVO_07920 PF01743 Poly A polymerase head domain NOVO_07940 PF02321 Outer membrane efflux protein NOVO_07945 PF10691 Protein of unknown function (DUF2497) NOVO_07955 PF01746 tRNA (Guanine-1)-methyltransferase NOVO_07960 PF00012 Hsp70 protein NOVO_07965 PF00684 DnaJ central domain NOVO_07965 PF01556 DnaJ C terminal domain NOVO_07965 PF00226 DnaJ domain NOVO_07975 PF00156 Phosphoribosyl transferase domain NOVO_07990 PF06574 FAD synthetase NOVO_07990 PF01687 Riboflavin kinase NOVO_07995 PF00885 6,7-dimethyl-8-ribityllumazine synthase NOVO_08000 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NOVO_08000 PF00925 GTP cyclohydrolase II NOVO_08005 PF00677 Lumazine binding domain NOVO_08010 PF01872 RibD C-terminal domain NOVO_08010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NOVO_08015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NOVO_08015 PF00672 HAMP domain NOVO_08020 PF00107 Zinc-binding dehydrogenase NOVO_08020 PF08240 Alcohol dehydrogenase GroES-like domain NOVO_08030 PF03100 CcmE NOVO_08035 PF01040 UbiA prenyltransferase family NOVO_08040 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NOVO_08060 PF02684 Lipid-A-disaccharide synthetase NOVO_08065 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NOVO_08070 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NOVO_08075 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NOVO_08080 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NOVO_08095 PF10531 SLBB domain NOVO_08095 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NOVO_08095 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NOVO_08100 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal NOVO_08100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NOVO_08100 PF00384 Molybdopterin oxidoreductase NOVO_08105 PF00146 NADH dehydrogenase NOVO_08110 PF12838 4Fe-4S dicluster domain NOVO_08115 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NOVO_08120 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NOVO_08125 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NOVO_08125 PF00361 Proton-conducting membrane transporter NOVO_08130 PF00361 Proton-conducting membrane transporter NOVO_08130 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NOVO_08135 PF00361 Proton-conducting membrane transporter NOVO_08140 PF03099 Biotin/lipoate A/B protein ligase family NOVO_08140 PF08279 HTH domain NOVO_08140 PF02237 Biotin protein ligase C terminal domain NOVO_08145 PF03309 Type III pantothenate kinase NOVO_08150 PF12706 Beta-lactamase superfamily domain NOVO_08150 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NOVO_08150 PF17770 Ribonuclease J C-terminal domain NOVO_08155 PF01515 Phosphate acetyl/butaryl transferase NOVO_08155 PF03949 Malic enzyme, NAD binding domain NOVO_08155 PF00390 Malic enzyme, N-terminal domain NOVO_08160 PF01649 Ribosomal protein S20 NOVO_08170 PF02699 Preprotein translocase subunit NOVO_08195 PF00118 TCP-1/cpn60 chaperonin family NOVO_08200 PF00166 Chaperonin 10 Kd subunit NOVO_08210 PF02623 FliW protein NOVO_08220 PF07196 Flagellin hook IN motif NOVO_08220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NOVO_08235 PF02119 Flagellar P-ring protein NOVO_08245 PF03717 Penicillin-binding Protein dimerisation domain NOVO_08245 PF00905 Penicillin binding protein transpeptidase domain NOVO_08250 PF01565 FAD binding domain NOVO_08250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NOVO_08270 PF08299 Bacterial dnaA protein helix-turn-helix NOVO_08270 PF00308 Bacterial dnaA protein NOVO_08270 PF11638 DnaA N-terminal domain NOVO_08275 PF00712 DNA polymerase III beta subunit, N-terminal domain NOVO_08275 PF02768 DNA polymerase III beta subunit, C-terminal domain NOVO_08275 PF02767 DNA polymerase III beta subunit, central domain NOVO_08285 PF02390 Putative methyltransferase NOVO_08295 PF01464 Transglycosylase SLT domain NOVO_08300 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NOVO_08300 PF14850 DNA-binding domain of Proline dehydrogenase NOVO_08300 PF01619 Proline dehydrogenase NOVO_08300 PF00171 Aldehyde dehydrogenase family NOVO_08305 PF13167 GTP-binding GTPase N-terminal NOVO_08305 PF16360 GTP-binding GTPase Middle Region NOVO_08305 PF01926 50S ribosome-binding GTPase NOVO_08310 PF13358 DDE superfamily endonuclease NOVO_08335 PF13358 DDE superfamily endonuclease NOVO_08340 PF02810 SEC-C motif NOVO_08340 PF01043 SecA preprotein cross-linking domain NOVO_08340 PF07516 SecA Wing and Scaffold domain NOVO_08340 PF07517 SecA DEAD-like domain NOVO_08375 PF13358 DDE superfamily endonuclease NOVO_08385 PF02810 SEC-C motif NOVO_08385 PF07517 SecA DEAD-like domain NOVO_08385 PF01043 SecA preprotein cross-linking domain NOVO_08385 PF07516 SecA Wing and Scaffold domain NOVO_08385 PF00271 Helicase conserved C-terminal domain NOVO_08450 PF06250 YhcG PDDEXK nuclease domain NOVO_08450 PF17761 DUF1016 N-terminal domain NOVO_08480 PF02348 Cytidylyltransferase NOVO_08485 PF01063 Amino-transferase class IV NOVO_08490 PF00701 Dihydrodipicolinate synthetase family NOVO_08495 PF01668 SmpB protein NOVO_08500 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NOVO_08565 PF04055 Radical SAM superfamily NOVO_08580 PF01118 Semialdehyde dehydrogenase, NAD binding domain NOVO_08580 PF02774 Semialdehyde dehydrogenase, dimerisation domain NOVO_08600 PF03070 TENA/THI-4/PQQC family NOVO_08600 PF08543 Phosphomethylpyrimidine kinase NOVO_08600 PF02581 Thiamine monophosphate synthase NOVO_08605 PF00210 Ferritin-like domain NOVO_08610 PF13614 AAA domain NOVO_08625 PF18073 Rubredoxin metal binding domain NOVO_08630 PF02590 Predicted SPOUT methyltransferase NOVO_08660 PF09308 LuxQ, periplasmic NOVO_08660 PF00512 His Kinase A (phospho-acceptor) domain NOVO_08660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_08660 PF00072 Response regulator receiver domain NOVO_08665 PF00311 Phosphoenolpyruvate carboxylase NOVO_08670 PF01312 FlhB HrpN YscU SpaS Family NOVO_08680 PF12826 Helix-hairpin-helix motif NOVO_08680 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NOVO_08680 PF03120 NAD-dependent DNA ligase OB-fold domain NOVO_08680 PF01653 NAD-dependent DNA ligase adenylation domain NOVO_08680 PF00533 BRCA1 C Terminus (BRCT) domain NOVO_08685 PF04542 Sigma-70 region 2 NOVO_08685 PF00140 Sigma-70 factor, region 1.2 NOVO_08685 PF04545 Sigma-70, region 4 NOVO_08690 PF03129 Anticodon binding domain NOVO_08690 PF13393 Histidyl-tRNA synthetase NOVO_08710 PF13358 DDE superfamily endonuclease NOVO_08730 PF13358 DDE superfamily endonuclease NOVO_08740 PF01906 Putative heavy-metal-binding NOVO_08745 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NOVO_08750 PF18074 Primosomal protein N C-terminal domain NOVO_08750 PF00271 Helicase conserved C-terminal domain NOVO_08750 PF00270 DEAD/DEAH box helicase NOVO_08750 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NOVO_08750 PF17764 3′ DNA-binding domain (3′BD) NOVO_08755 PF01609 Transposase DDE domain NOVO_08775 PF13358 DDE superfamily endonuclease NOVO_08780 PF01471 Putative peptidoglycan binding domain NOVO_08780 PF01183 Glycosyl hydrolases family 25 NOVO_08785 PF04860 Phage portal protein NOVO_08795 PF04860 Phage portal protein NOVO_08805 PF00664 ABC transporter transmembrane region NOVO_08805 PF00005 ABC transporter NOVO_08820 PF13358 DDE superfamily endonuclease NOVO_08840 PF03741 Integral membrane protein TerC family NOVO_08845 PF07549 SecD/SecF GG Motif NOVO_08845 PF02355 Protein export membrane protein NOVO_08880 PF01351 Ribonuclease HII NOVO_08890 PF01513 ATP-NAD kinase NOVO_08895 PF01297 Zinc-uptake complex component A periplasmic NOVO_08900 PF03449 Transcription elongation factor, N-terminal NOVO_08900 PF01272 Transcription elongation factor, GreA/GreB, C-term NOVO_08905 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NOVO_08905 PF02142 MGS-like domain NOVO_08905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NOVO_08910 PF00117 Glutamine amidotransferase class-I NOVO_08910 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NOVO_08920 PF00834 Ribulose-phosphate 3 epimerase family NOVO_08925 PF11020 Domain of unknown function (DUF2610) NOVO_08940 PF02254 TrkA-N domain NOVO_08940 PF00999 Sodium/hydrogen exchanger family NOVO_08950 PF06213 Cobalamin biosynthesis protein CobT NOVO_08950 PF11775 Cobalamin biosynthesis protein CobT VWA domain NOVO_08960 PF13358 DDE superfamily endonuclease NOVO_09000 PF00813 FliP family NOVO_09015 PF00005 ABC transporter NOVO_09020 PF13358 DDE superfamily endonuclease NOVO_09080 PF01476 LysM domain NOVO_09105 PF01883 Iron-sulfur cluster assembly protein NOVO_09105 PF10609 NUBPL iron-transfer P-loop NTPase NOVO_09110 PF00239 Resolvase, N terminal domain NOVO_09110 PF02796 Helix-turn-helix domain of resolvase NOVO_09150 PF02796 Helix-turn-helix domain of resolvase NOVO_09150 PF00239 Resolvase, N terminal domain NOVO_09170 PF08751 TrwC relaxase NOVO_09170 PF18340 DNA relaxase TraI 2B/2B-like domain NOVO_09170 PF07057 DNA helicase TraI NOVO_09170 PF18272 single-stranded DNA binding TraI N-terminal subdomain NOVO_09175 PF06250 YhcG PDDEXK nuclease domain NOVO_09175 PF17761 DUF1016 N-terminal domain NOVO_09180 PF10412 Type IV secretion-system coupling protein DNA-binding domain NOVO_09180 PF12615 F sex factor protein N terminal NOVO_09205 PF06986 Type-1V conjugative transfer system mating pair stabilisation NOVO_09220 PF06834 TraU protein NOVO_09245 PF03743 Bacterial conjugation TrbI-like protein NOVO_09335 PF01381 Helix-turn-helix NOVO_09355 PF00589 Phage integrase family NOVO_09385 PF01850 PIN domain NOVO_09390 PF03350 Uncharacterized protein family, UPF0114 NOVO_09400 PF16363 GDP-mannose 4,6 dehydratase NOVO_09405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NOVO_09440 PF14524 Wzt C-terminal domain NOVO_09440 PF00005 ABC transporter NOVO_09455 PF02195 ParB-like nuclease domain NOVO_09455 PF17762 HTH domain found in ParB protein