NOVO_00005 PF13473 Cupredoxin-like domain NOVO_00015 PF13358 DDE superfamily endonuclease NOVO_00020 PF01710 Transposase NOVO_00040 PF00375 Sodium:dicarboxylate symporter family NOVO_00045 PF12796 Ankyrin repeats (3 copies) NOVO_00050 PF02381 MraZ protein NOVO_00060 PF01795 MraW methylase family NOVO_00070 PF00905 Penicillin binding protein transpeptidase domain NOVO_00070 PF03717 Penicillin-binding Protein dimerisation domain NOVO_00075 PF01225 Mur ligase family, catalytic domain NOVO_00075 PF02875 Mur ligase family, glutamate ligase domain NOVO_00075 PF08245 Mur ligase middle domain NOVO_00080 PF03067 Chitin binding domain NOVO_00085 PF13358 DDE superfamily endonuclease NOVO_00090 PF01710 Transposase NOVO_00115 PF05057 Putative serine esterase (DUF676) NOVO_00120 PF08238 Sel1 repeat NOVO_00120 PF13365 Trypsin-like peptidase domain NOVO_00125 PF09537 Domain of unknown function (DUF2383) NOVO_00130 PF01710 Transposase NOVO_00155 PF01292 Prokaryotic cytochrome b561 NOVO_00160 PF00285 Citrate synthase NOVO_00170 PF13358 DDE superfamily endonuclease NOVO_00175 PF01710 Transposase NOVO_00180 PF12796 Ankyrin repeats (3 copies) NOVO_00185 PF00488 MutS domain V NOVO_00185 PF01624 MutS domain I NOVO_00185 PF05188 MutS domain II NOVO_00185 PF05190 MutS family domain IV NOVO_00185 PF05192 MutS domain III NOVO_00200 PF02441 Flavoprotein NOVO_00205 PF01225 Mur ligase family, catalytic domain NOVO_00205 PF02875 Mur ligase family, glutamate ligase domain NOVO_00205 PF08245 Mur ligase middle domain NOVO_00210 PF04608 Phosphatidylglycerophosphatase A NOVO_00220 PF00202 Aminotransferase class-III NOVO_00230 PF14441 NOVO_00230 NOVO_00240 PF01710 Transposase NOVO_00245 PF13358 DDE superfamily endonuclease NOVO_00260 PF03033 Glycosyltransferase family 28 N-terminal domain NOVO_00260 PF04101 Glycosyltransferase family 28 C-terminal domain NOVO_00265 PF01098 NOVO_00265 NOVO_00270 PF00578 AhpC/TSA family NOVO_00270 PF10417 C-terminal domain of 1-Cys peroxiredoxin NOVO_00275 PF07992 Pyridine nucleotide-disulphide oxidoreductase NOVO_00280 PF13502 NOVO_00280 NOVO_00285 PF06305 NOVO_00285 NOVO_00290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NOVO_00315 PF00959 Phage lysozyme NOVO_00330 PF10983 NOVO_00330 NOVO_00345 PF13547 NOVO_00345 NOVO_00345 PF13550 NOVO_00345 NOVO_00350 PF01734 Patatin-like phospholipase NOVO_00360 PF09356 NOVO_00360 NOVO_00365 PF13358 DDE superfamily endonuclease NOVO_00370 PF01710 Transposase NOVO_00405 PF06199 NOVO_00405 NOVO_00410 PF11367 Protein of unknown function (DUF3168) NOVO_00415 PF05521 Phage head-tail joining protein NOVO_00420 PF05135 Phage gp6-like head-tail connector protein NOVO_00430 PF07798 NOVO_00430 NOVO_00440 PF09550 NOVO_00440 NOVO_00455 PF01381 Helix-turn-helix NOVO_00465 PF11836 NOVO_00465 NOVO_00470 PF05065 Phage capsid family NOVO_00475 PF04586 NOVO_00475 NOVO_00490 PF13737 NOVO_00490 NOVO_00495 PF07690 Major Facilitator Superfamily NOVO_00500 PF00665 Integrase core domain NOVO_00515 PF01209 ubiE/COQ5 methyltransferase family NOVO_00520 PF03109 NOVO_00520 NOVO_00525 PF03372 Endonuclease/Exonuclease/phosphatase family NOVO_00550 PF13358 DDE superfamily endonuclease NOVO_00555 PF01710 Transposase NOVO_00560 PF00023 Ankyrin repeat NOVO_00565 PF01548 NOVO_00565 NOVO_00565 PF02371 NOVO_00565 NOVO_00570 PF00326 Prolyl oligopeptidase family NOVO_00575 PF00484 Carbonic anhydrase NOVO_00585 PF01710 Transposase NOVO_00590 PF13358 DDE superfamily endonuclease NOVO_00605 PF02561 Flagellar protein FliS NOVO_00610 PF02465 NOVO_00610 NOVO_00610 PF07195 NOVO_00610 NOVO_00610 PF07196 Flagellin hook IN motif NOVO_00615 PF01192 RNA polymerase Rpb6 NOVO_00620 PF01710 Transposase NOVO_00625 PF13358 DDE superfamily endonuclease NOVO_00630 PF00152 tRNA synthetases class II (D, K and N) NOVO_00630 PF01336 OB-fold nucleic acid binding domain NOVO_00630 PF02938 GAD domain NOVO_00650 PF08543 Phosphomethylpyrimidine kinase NOVO_00655 PF02110 Hydroxyethylthiazole kinase family NOVO_00660 PF02581 Thiamine monophosphate synthase/TENI NOVO_00665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NOVO_00675 PF01564 Spermine/spermidine synthase NOVO_00680 PF13358 DDE superfamily endonuclease NOVO_00685 PF01710 Transposase NOVO_00695 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NOVO_00695 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal NOVO_00695 PF13288 DXP reductoisomerase C-terminal domain NOVO_00700 PF01963 NOVO_00700 NOVO_00705 PF03486 HI0933-like protein NOVO_00715 PF00023 Ankyrin repeat NOVO_00720 PF01327 Polypeptide deformylase NOVO_00725 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NOVO_00725 PF02843 Phosphoribosylglycinamide synthetase, C domain NOVO_00725 PF02844 Phosphoribosylglycinamide synthetase, N domain NOVO_00730 PF02601 NOVO_00730 NOVO_00730 PF13742 NOVO_00730 NOVO_00740 PF01541 GIY-YIG catalytic domain NOVO_00740 PF02151 UvrB/uvrC motif NOVO_00740 PF08459 UvrC Helix-hairpin-helix N-terminal NOVO_00740 PF12826 Helix-hairpin-helix motif NOVO_00745 PF01066 CDP-alcohol phosphatidyltransferase NOVO_00750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NOVO_00755 PF01430 Hsp33 protein NOVO_00760 PF13687 NOVO_00760 NOVO_00765 PF07690 Major Facilitator Superfamily NOVO_00770 PF16576 NOVO_00770 NOVO_00775 PF06723 MreB/Mbl protein NOVO_00780 PF04085 rod shape-determining protein MreC NOVO_00785 PF13704 NOVO_00785 NOVO_00800 PF01063 Aminotransferase class IV NOVO_00805 PF00072 Response regulator receiver domain NOVO_00805 PF00158 Sigma-54 interaction domain NOVO_00805 PF02954 Bacterial regulatory protein, Fis family NOVO_00810 PF02223 Thymidylate kinase NOVO_00815 PF01161 Phosphatidylethanolamine-binding protein NOVO_00820 PF04430 Protein of unknown function (DUF498/DUF598) NOVO_00825 PF02355 Protein export membrane protein NOVO_00825 PF07549 SecD/SecF GG Motif NOVO_00830 PF01966 HD domain NOVO_00830 PF13286 Phosphohydrolase-associated domain NOVO_00840 PF13358 DDE superfamily endonuclease NOVO_00845 PF01710 Transposase NOVO_00860 PF00931 NB-ARC domain NOVO_00860 PF13181 Tetratricopeptide repeat NOVO_00875 PF00696 Amino acid kinase family NOVO_00875 PF01472 PUA domain NOVO_00885 PF04364 DNA polymerase III chi subunit, HolC NOVO_00890 PF00883 Cytosol aminopeptidase family, catalytic domain NOVO_00890 PF02789 Cytosol aminopeptidase family, N-terminal domain NOVO_00895 PF09335 NOVO_00895 NOVO_00900 PF03190 Protein of unknown function, DUF255 NOVO_00900 PF11412 Disulphide bond corrector protein DsbC NOVO_00935 PF01027 Inhibitor of apoptosis-promoting Bax1 NOVO_00940 PF00557 Metallopeptidase family M24 NOVO_00940 PF01321 Creatinase/Prolidase N-terminal domain NOVO_00940 PF16188 NOVO_00940 NOVO_00940 PF16189 NOVO_00940 NOVO_00945 PF13181 Tetratricopeptide repeat NOVO_00945 PF13414 TPR repeat NOVO_00950 PF10871 NOVO_00950 NOVO_00955 PF00072 Response regulator receiver domain NOVO_00955 PF00512 His Kinase A (phospho-acceptor) domain NOVO_00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_00965 PF00072 Response regulator receiver domain NOVO_00970 PF13358 DDE superfamily endonuclease NOVO_00975 PF01710 Transposase NOVO_00980 PF12796 Ankyrin repeats (3 copies) NOVO_00980 PF13637 Ankyrin repeats (many copies) NOVO_00985 PF10017 NOVO_00985 NOVO_00990 PF00512 His Kinase A (phospho-acceptor) domain NOVO_00995 PF01710 Transposase NOVO_01000 PF13358 DDE superfamily endonuclease NOVO_01015 PF00771 FHIPEP family NOVO_01020 PF01553 Acyltransferase NOVO_01025 PF04379 Protein of unknown function (DUF525) NOVO_01030 PF05170 NOVO_01030 NOVO_01045 PF01728 FtsJ-like methyltransferase NOVO_01050 PF13599 Pentapeptide repeats (9 copies) NOVO_01055 PF08241 Methyltransferase domain NOVO_01070 PF02481 DNA recombination-mediator protein A NOVO_01075 PF01131 DNA topoisomerase NOVO_01075 PF01396 NOVO_01075 NOVO_01075 PF01751 Toprim domain NOVO_01075 PF13368 NOVO_01075 NOVO_01080 PF00665 Integrase core domain NOVO_01085 PF00589 Phage integrase family NOVO_01085 PF02899 Phage integrase, N-terminal SAM-like domain NOVO_01090 PF00155 Aminotransferase class I and II NOVO_01105 PF03548 Outer membrane lipoprotein carrier protein LolA NOVO_01115 PF01710 Transposase NOVO_01120 PF13358 DDE superfamily endonuclease NOVO_01130 PF12796 Ankyrin repeats (3 copies) NOVO_01135 PF12796 Ankyrin repeats (3 copies) NOVO_01135 PF13637 Ankyrin repeats (many copies) NOVO_01140 PF12796 Ankyrin repeats (3 copies) NOVO_01150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NOVO_01155 PF12796 Ankyrin repeats (3 copies) NOVO_01160 PF13358 DDE superfamily endonuclease NOVO_01165 PF01710 Transposase NOVO_01180 PF00989 PAS fold NOVO_01190 PF00476 DNA polymerase family A NOVO_01190 PF01367 5'-3' exonuclease, C-terminal SAM fold NOVO_01190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NOVO_01195 PF00085 Thioredoxin NOVO_01220 PF13332 NOVO_01220 NOVO_01235 PF13516 Leucine Rich repeat NOVO_01240 PF12796 Ankyrin repeats (3 copies) NOVO_01240 PF13516 Leucine Rich repeat NOVO_01245 PF13516 Leucine Rich repeat NOVO_01250 PF01710 Transposase NOVO_01255 PF13358 DDE superfamily endonuclease NOVO_01260 PF00330 Aconitase family (aconitate hydratase) NOVO_01260 PF00694 Aconitase C-terminal domain NOVO_01280 PF12796 Ankyrin repeats (3 copies) NOVO_01285 PF13302 Acetyltransferase (GNAT) domain NOVO_01290 PF06850 NOVO_01290 NOVO_01340 PF02033 Ribosome-binding factor A NOVO_01345 PF00009 Elongation factor Tu GTP binding domain NOVO_01345 PF04760 Translation initiation factor IF-2, N-terminal region NOVO_01345 PF08364 NOVO_01345 NOVO_01345 PF11987 Translation-initiation factor 2 NOVO_01350 PF00575 S1 RNA binding domain NOVO_01350 PF08529 NusA N-terminal domain NOVO_01350 PF13184 NusA-like KH domain NOVO_01355 PF02576 Uncharacterised BCR, YhbC family COG0779 NOVO_01355 PF17384 NOVO_01355 NOVO_01360 PF03485 Arginyl tRNA synthetase N terminal domain NOVO_01360 PF05746 DALR anticodon binding domain NOVO_01365 PF05036 Sporulation related domain NOVO_01370 PF00515 Tetratricopeptide repeat NOVO_01370 PF13181 Tetratricopeptide repeat NOVO_01370 PF13414 TPR repeat NOVO_01375 PF13181 Tetratricopeptide repeat NOVO_01375 PF13414 TPR repeat NOVO_01400 PF00905 Penicillin binding protein transpeptidase domain NOVO_01405 PF00551 Formyl transferase NOVO_01410 PF00586 AIR synthase related protein, N-terminal domain NOVO_01410 PF02769 AIR synthase related protein, C-terminal domain NOVO_01420 PF01594 NOVO_01420 NOVO_01425 PF00308 Bacterial dnaA protein NOVO_01430 PF01245 Ribosomal protein L19 NOVO_01440 PF03448 MgtE intracellular N domain NOVO_01450 PF01052 Surface presentation of antigens (SPOA) NOVO_01450 PF02154 Flagellar motor switch protein FliM NOVO_01455 PF03748 NOVO_01455 NOVO_01460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NOVO_01465 PF00460 Flagella basal body rod protein NOVO_01465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NOVO_01470 PF13358 DDE superfamily endonuclease NOVO_01475 PF01710 Transposase NOVO_01480 PF10768 NOVO_01480 NOVO_01485 PF00892 EamA-like transporter family NOVO_01490 PF00510 Cytochrome c oxidase subunit III NOVO_01495 PF07396 Phosphate-selective porin O and P NOVO_01500 PF12849 PBP superfamily domain NOVO_01505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NOVO_01505 PF02403 Seryl-tRNA synthetase N-terminal domain NOVO_01510 PF00902 Sec-independent protein translocase protein (TatC) NOVO_01520 PF02167 Cytochrome C1 family NOVO_01525 PF00032 Cytochrome b(C-terminal)/b6/petD NOVO_01525 PF00033 Cytochrome b(N-terminal)/b6/petB NOVO_01530 PF00355 Rieske [2Fe-2S] domain NOVO_01530 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NOVO_01535 PF00072 Response regulator receiver domain NOVO_01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_01545 PF00155 Aminotransferase class I and II NOVO_01550 PF00950 NOVO_01550 NOVO_01560 PF07690 Major Facilitator Superfamily NOVO_01570 PF13609 Gram-negative porin NOVO_01575 PF01168 Alanine racemase, N-terminal domain NOVO_01580 PF04325 Protein of unknown function (DUF465) NOVO_01585 PF03602 Conserved hypothetical protein 95 NOVO_01590 PF00849 RNA pseudouridylate synthase NOVO_01590 PF01479 S4 domain NOVO_01595 PF07722 Peptidase C26 NOVO_01600 PF07690 Major Facilitator Superfamily NOVO_01605 PF03372 Endonuclease/Exonuclease/phosphatase family NOVO_01610 PF01145 SPFH domain / Band 7 family NOVO_01610 PF16200 NOVO_01610 NOVO_01615 PF01957 NfeD-like C-terminal, partner-binding NOVO_01620 PF00034 Cytochrome c NOVO_01625 PF00375 Sodium:dicarboxylate symporter family NOVO_01630 PF16868 NOVO_01630 NOVO_01635 PF00582 Universal stress protein family NOVO_01640 PF00348 Polyprenyl synthetase NOVO_01645 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NOVO_01645 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NOVO_01650 PF07992 Pyridine nucleotide-disulphide oxidoreductase NOVO_01655 PF01098 NOVO_01655 NOVO_01670 PF13181 Tetratricopeptide repeat NOVO_01675 PF12728 Helix-turn-helix domain NOVO_01690 PF13443 Cro/C1-type HTH DNA-binding domain NOVO_01715 PF00437 Type II/IV secretion system protein NOVO_01720 PF04956 NOVO_01720 NOVO_01725 PF05101 NOVO_01725 NOVO_01730 PF03135 NOVO_01730 NOVO_01730 PF05707 Zonular occludens toxin (Zot) NOVO_01735 PF15919 NOVO_01735 NOVO_01740 PF07927 YcfA-like protein NOVO_01750 PF04610 NOVO_01750 NOVO_01755 PF04335 VirB8 protein NOVO_01760 PF03524 Conjugal transfer protein NOVO_01765 PF03743 Bacterial conjugation TrbI-like protein NOVO_01775 PF00665 Integrase core domain NOVO_01780 PF01609 Transposase DDE domain NOVO_01780 PF13340 NOVO_01780 NOVO_01790 PF01710 Transposase NOVO_01795 PF13358 DDE superfamily endonuclease NOVO_01805 PF13358 DDE superfamily endonuclease NOVO_01810 PF01710 Transposase NOVO_01815 PF04011 LemA family NOVO_01820 PF00575 S1 RNA binding domain NOVO_01825 PF02224 Cytidylate kinase NOVO_01830 PF00011 Hsp20/alpha crystallin family NOVO_01840 PF00171 Aldehyde dehydrogenase family NOVO_01845 PF02687 NOVO_01845 NOVO_01845 PF12704 MacB-like periplasmic core domain NOVO_01850 PF00005 ABC transporter NOVO_01855 PF00483 Nucleotidyl transferase NOVO_01865 PF13505 Outer membrane protein beta-barrel domain NOVO_01870 PF05958 tRNA (Uracil-5-)-methyltransferase NOVO_01885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NOVO_01885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NOVO_01900 PF00353 Hemolysin-type calcium-binding repeat (2 copies) NOVO_01910 PF01476 LysM domain NOVO_01915 PF01710 Transposase NOVO_01920 PF13358 DDE superfamily endonuclease NOVO_01925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NOVO_01925 PF03129 Anticodon binding domain NOVO_01935 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NOVO_01940 PF00448 SRP54-type protein, GTPase domain NOVO_01940 PF02881 SRP54-type protein, helical bundle domain NOVO_01945 PF00919 Uncharacterized protein family UPF0004 NOVO_01945 PF04055 Radical SAM superfamily NOVO_01950 PF01678 Diaminopimelate epimerase NOVO_01955 PF00772 DnaB-like helicase N terminal domain NOVO_01955 PF03796 DnaB-like helicase C terminal domain NOVO_01960 PF00842 Alanine racemase, C-terminal domain NOVO_01960 PF01168 Alanine racemase, N-terminal domain NOVO_01965 PF02630 SCO1/SenC NOVO_01970 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NOVO_01985 PF14441 NOVO_01985 NOVO_02005 PF13683 NOVO_02005 NOVO_02010 PF00665 Integrase core domain NOVO_02020 PF00665 Integrase core domain NOVO_02025 PF13586 NOVO_02025 NOVO_02030 PF13340 NOVO_02030 NOVO_02040 PF00239 Resolvase, N terminal domain NOVO_02040 PF02796 Helix-turn-helix domain of resolvase NOVO_02060 PF01850 PIN domain NOVO_02070 PF04230 NOVO_02070 NOVO_02090 PF00682 HMGL-like NOVO_02105 PF07517 SecA DEAD-like domain NOVO_02110 PF01710 Transposase NOVO_02120 PF01610 NOVO_02120 NOVO_02130 PF12796 Ankyrin repeats (3 copies) NOVO_02140 PF12969 Domain of Unknown Function with PDB structure (DUF3857) NOVO_02150 PF01300 Telomere recombination NOVO_02155 PF00013 KH domain NOVO_02155 PF00575 S1 RNA binding domain NOVO_02155 PF01138 3' exoribonuclease family, domain 1 NOVO_02155 PF03725 3' exoribonuclease family, domain 2 NOVO_02155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NOVO_02160 PF00312 Ribosomal protein S15 NOVO_02165 PF01509 TruB family pseudouridylate synthase (N terminal domain) NOVO_02165 PF16198 NOVO_02165 NOVO_02170 PF00464 Serine hydroxymethyltransferase NOVO_02175 PF02502 Ribose/Galactose Isomerase NOVO_02180 PF03938 Outer membrane protein (OmpH-like) NOVO_02185 PF01103 Surface antigen NOVO_02185 PF07244 Surface antigen variable number repeat NOVO_02190 PF02163 Peptidase family M50 NOVO_02195 PF00056 lactate/malate dehydrogenase, NAD binding domain NOVO_02195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NOVO_02200 PF02811 PHP domain NOVO_02200 PF07733 Bacterial DNA polymerase III alpha subunit NOVO_02200 PF14579 Helix-hairpin-helix motif NOVO_02210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NOVO_02210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NOVO_02210 PF16113 NOVO_02210 NOVO_02215 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains NOVO_02240 PF01588 Putative tRNA binding domain NOVO_02240 PF03147 Ferredoxin-fold anticodon binding domain NOVO_02240 PF03483 B3/4 domain NOVO_02240 PF03484 tRNA synthetase B5 domain NOVO_02245 PF01409 tRNA synthetases class II core domain (F) NOVO_02245 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NOVO_02250 PF01520 N-acetylmuramoyl-L-alanine amidase NOVO_02255 PF00575 S1 RNA binding domain NOVO_02255 PF10150 Ribonuclease E/G family NOVO_02265 PF00933 Glycosyl hydrolase family 3 N terminal domain NOVO_02270 PF16363 NOVO_02270 NOVO_02275 PF00117 Glutamine amidotransferase class-I NOVO_02275 PF06418 CTP synthase N-terminus NOVO_02280 PF03840 Preprotein translocase SecG subunit NOVO_02285 PF00121 Triosephosphate isomerase NOVO_02290 PF13145 PPIC-type PPIASE domain NOVO_02290 PF13624 SurA N-terminal domain NOVO_02295 PF00313 'Cold-shock' DNA-binding domain NOVO_02300 PF00270 DEAD/DEAH box helicase NOVO_02300 PF00271 Helicase conserved C-terminal domain NOVO_02305 PF00460 Flagella basal body rod protein NOVO_02305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NOVO_02305 PF07559 Flagellar basal body protein FlaE NOVO_02310 PF03963 NOVO_02310 NOVO_02310 PF13860 FlgD Ig-like domain NOVO_02315 PF02120 Flagellar hook-length control protein FliK NOVO_02320 PF00375 Sodium:dicarboxylate symporter family NOVO_02325 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NOVO_02325 PF03900 Porphobilinogen deaminase, C-terminal domain NOVO_02330 PF00268 Ribonucleotide reductase, small chain NOVO_02335 PF00317 Ribonucleotide reductase, all-alpha domain NOVO_02335 PF02867 Ribonucleotide reductase, barrel domain NOVO_02345 PF03135 NOVO_02345 NOVO_02350 PF04956 NOVO_02350 NOVO_02355 PF04956 NOVO_02355 NOVO_02360 PF04956 NOVO_02360 NOVO_02365 PF04956 NOVO_02365 NOVO_02375 PF00570 HRDC domain NOVO_02375 PF01612 3'-5' exonuclease NOVO_02380 PF13516 Leucine Rich repeat NOVO_02390 PF13443 Cro/C1-type HTH DNA-binding domain NOVO_02395 PF00939 Sodium:sulfate symporter transmembrane region NOVO_02400 PF03167 Uracil DNA glycosylase superfamily NOVO_02405 PF01580 FtsK/SpoIIIE family NOVO_02405 PF09397 Ftsk gamma domain NOVO_02405 PF13491 NOVO_02405 NOVO_02410 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NOVO_02415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NOVO_02420 PF00309 NOVO_02420 NOVO_02420 PF04552 Sigma-54, DNA binding domain NOVO_02420 PF04963 Sigma-54 factor, core binding domain NOVO_02425 PF01381 Helix-turn-helix NOVO_02430 PF01926 50S ribosome-binding GTPase NOVO_02430 PF06071 Protein of unknown function (DUF933) NOVO_02440 PF00953 Glycosyl transferase family 4 NOVO_02440 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NOVO_02445 PF01225 Mur ligase family, catalytic domain NOVO_02445 PF02875 Mur ligase family, glutamate ligase domain NOVO_02445 PF08245 Mur ligase middle domain NOVO_02450 PF00035 Double-stranded RNA binding motif NOVO_02450 PF14622 Ribonuclease-III-like NOVO_02455 PF00717 Peptidase S24-like NOVO_02455 PF10502 Signal peptidase, peptidase S26 NOVO_02460 PF01676 Metalloenzyme superfamily NOVO_02460 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NOVO_02465 PF01895 PhoU domain NOVO_02470 PF01343 Peptidase family S49 NOVO_02475 PF01119 DNA mismatch repair protein, C-terminal domain NOVO_02475 PF08676 MutL C terminal dimerisation domain NOVO_02475 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_02485 PF00072 Response regulator receiver domain NOVO_02485 PF00486 Transcriptional regulatory protein, C terminal NOVO_02490 PF00698 Acyl transferase domain NOVO_02495 PF00691 OmpA family NOVO_02500 PF00459 Inositol monophosphatase family NOVO_02505 PF01132 Elongation factor P (EF-P) OB domain NOVO_02505 PF08207 Elongation factor P (EF-P) KOW-like domain NOVO_02505 PF09285 Elongation factor P, C-terminal NOVO_02510 PF01791 DeoC/LacD family aldolase NOVO_02530 PF00581 Rhodanese-like domain NOVO_02535 PF02599 Global regulator protein family NOVO_02545 PF00460 Flagella basal body rod protein NOVO_02550 PF02049 NOVO_02550 NOVO_02555 PF01313 NOVO_02555 NOVO_02560 PF13358 DDE superfamily endonuclease NOVO_02565 PF01710 Transposase NOVO_02570 PF07690 Major Facilitator Superfamily NOVO_02575 PF00453 Ribosomal protein L20 NOVO_02580 PF01632 Ribosomal protein L35 NOVO_02585 PF14566 Inositol hexakisphosphate NOVO_02590 PF00326 Prolyl oligopeptidase family NOVO_02590 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NOVO_02600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NOVO_02605 PF01467 Cytidylyltransferase NOVO_02610 PF00521 DNA gyrase/topoisomerase IV, subunit A NOVO_02610 PF03989 DNA gyrase C-terminal domain, beta-propeller NOVO_02615 PF01609 Transposase DDE domain NOVO_02620 PF13358 DDE superfamily endonuclease NOVO_02625 PF01710 Transposase NOVO_02630 PF00623 RNA polymerase Rpb1, domain 2 NOVO_02630 PF04983 RNA polymerase Rpb1, domain 3 NOVO_02630 PF04997 RNA polymerase Rpb1, domain 1 NOVO_02630 PF04998 RNA polymerase Rpb1, domain 5 NOVO_02630 PF05000 RNA polymerase Rpb1, domain 4 NOVO_02635 PF00562 RNA polymerase Rpb2, domain 6 NOVO_02635 PF04560 RNA polymerase Rpb2, domain 7 NOVO_02635 PF04561 RNA polymerase Rpb2, domain 2 NOVO_02635 PF04563 RNA polymerase beta subunit NOVO_02635 PF04565 RNA polymerase Rpb2, domain 3 NOVO_02635 PF10385 RNA polymerase beta subunit external 1 domain NOVO_02640 PF00542 Ribosomal protein L7/L12 C-terminal domain NOVO_02640 PF16320 NOVO_02640 NOVO_02645 PF00466 Ribosomal protein L10 NOVO_02650 PF00687 Ribosomal protein L1p/L10e family NOVO_02655 PF00298 Ribosomal protein L11, RNA binding domain NOVO_02655 PF03946 Ribosomal protein L11, N-terminal domain NOVO_02660 PF00467 KOW motif NOVO_02660 PF02357 Transcription termination factor nusG NOVO_02665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NOVO_02675 PF00009 Elongation factor Tu GTP binding domain NOVO_02675 PF03143 Elongation factor Tu C-terminal domain NOVO_02675 PF03144 Elongation factor Tu domain 2 NOVO_02680 PF00009 Elongation factor Tu GTP binding domain NOVO_02680 PF00679 Elongation factor G C-terminus NOVO_02680 PF03144 Elongation factor Tu domain 2 NOVO_02680 PF03764 Elongation factor G, domain IV NOVO_02680 PF14492 Elongation Factor G, domain II NOVO_02685 PF00177 Ribosomal protein S7p/S5e NOVO_02690 PF00164 Ribosomal protein S12/S23 NOVO_02695 PF13685 Iron-containing alcohol dehydrogenase NOVO_02700 PF12706 Beta-lactamase superfamily domain NOVO_02705 PF01569 PAP2 superfamily NOVO_02715 PF00512 His Kinase A (phospho-acceptor) domain NOVO_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_02720 PF00892 EamA-like transporter family NOVO_02725 PF00919 Uncharacterized protein family UPF0004 NOVO_02725 PF01938 TRAM domain NOVO_02725 PF04055 Radical SAM superfamily NOVO_02730 PF01475 Ferric uptake regulator family NOVO_02735 PF10073 NOVO_02735 NOVO_02740 PF00994 Probable molybdopterin binding domain NOVO_02745 PF00557 Metallopeptidase family M24 NOVO_02750 PF04002 RadC-like JAB domain NOVO_02755 PF00805 Pentapeptide repeats (8 copies) NOVO_02755 PF13599 Pentapeptide repeats (9 copies) NOVO_02765 PF00375 Sodium:dicarboxylate symporter family NOVO_02770 PF08443 RimK-like ATP-grasp domain NOVO_02775 PF08245 Mur ligase middle domain NOVO_02780 PF00580 UvrD/REP helicase N-terminal domain NOVO_02780 PF12705 PD-(D/E)XK nuclease superfamily NOVO_02780 PF13361 UvrD-like helicase C-terminal domain NOVO_02785 PF00300 Histidine phosphatase superfamily (branch 1) NOVO_02790 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NOVO_02795 PF00665 Integrase core domain NOVO_02805 PF04055 Radical SAM superfamily NOVO_02805 PF06969 HemN C-terminal domain NOVO_02810 PF01029 NusB family NOVO_02815 PF13116 NOVO_02815 NOVO_02815 PF13502 NOVO_02815 NOVO_02825 PF02205 WH2 motif NOVO_02830 PF13358 DDE superfamily endonuclease NOVO_02835 PF01710 Transposase NOVO_02840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NOVO_02840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NOVO_02840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NOVO_02845 PF00483 Nucleotidyl transferase NOVO_02850 PF00471 Ribosomal protein L33 NOVO_02855 PF00886 Ribosomal protein S16 NOVO_02865 PF13358 DDE superfamily endonuclease NOVO_02870 PF01710 Transposase NOVO_02875 PF00892 EamA-like transporter family NOVO_02880 PF00133 tRNA synthetases class I (I, L, M and V) NOVO_02880 PF08264 Anticodon-binding domain of tRNA NOVO_02885 PF00231 ATP synthase NOVO_02890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NOVO_02890 PF00306 ATP synthase alpha/beta chain, C terminal domain NOVO_02890 PF02874 ATP synthase alpha/beta family, beta-barrel domain NOVO_02895 PF00213 ATP synthase delta (OSCP) subunit NOVO_02900 PF00591 Glycosyl transferase family, a/b domain NOVO_02900 PF02885 Glycosyl transferase family, helical bundle domain NOVO_02905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NOVO_02905 PF02542 YgbB family NOVO_02910 PF00430 ATP synthase B/B' CF(0) NOVO_02915 PF00430 ATP synthase B/B' CF(0) NOVO_02920 PF00137 ATP synthase subunit C NOVO_02925 PF00119 ATP synthase A chain NOVO_02930 PF09527 NOVO_02930 NOVO_02935 PF02798 Glutathione S-transferase, N-terminal domain NOVO_02935 PF14497 Glutathione S-transferase, C-terminal domain NOVO_02940 PF01165 Ribosomal protein S21 NOVO_02945 PF08511 COQ9 NOVO_02950 PF01921 tRNA synthetases class I (K) NOVO_02955 PF02600 Disulfide bond formation protein DsbB NOVO_02960 PF03232 NOVO_02960 NOVO_02965 PF00893 Small Multidrug Resistance protein NOVO_02975 PF04333 NOVO_02975 NOVO_02980 PF05494 Toluene tolerance, Ttg2 NOVO_02985 PF04066 NOVO_02985 NOVO_02990 PF03334 NOVO_02990 NOVO_02995 PF13244 NOVO_02995 NOVO_03000 PF04039 NOVO_03000 NOVO_03005 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NOVO_03010 PF04588 Hypoxia induced protein conserved region NOVO_03015 PF08373 NOVO_03015 NOVO_03025 PF06230 Protein of unknown function (DUF1009) NOVO_03030 PF00132 Bacterial transferase hexapeptide (six repeats) NOVO_03030 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NOVO_03035 PF07977 FabA-like domain NOVO_03040 PF00132 Bacterial transferase hexapeptide (six repeats) NOVO_03040 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NOVO_03045 PF02511 Thymidylate synthase complementing protein NOVO_03050 PF00749 tRNA synthetases class I (E and Q), catalytic domain NOVO_03055 PF06242 NOVO_03055 NOVO_03060 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NOVO_03065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NOVO_03065 PF02874 ATP synthase alpha/beta family, beta-barrel domain NOVO_03075 PF03091 CutA1 divalent ion tolerance protein NOVO_03090 PF00494 Squalene/phytoene synthase NOVO_03095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NOVO_03095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NOVO_03105 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NOVO_03110 PF00293 NUDIX domain NOVO_03110 PF01467 Cytidylyltransferase NOVO_03125 PF14736 NOVO_03125 NOVO_03130 PF00398 Ribosomal RNA adenine dimethylase NOVO_03135 PF11233 NOVO_03135 NOVO_03140 PF01252 NOVO_03140 NOVO_03145 PF06574 FAD synthetase NOVO_03155 PF01765 Ribosome recycling factor NOVO_03160 PF00696 Amino acid kinase family NOVO_03165 PF00889 Elongation factor TS NOVO_03170 PF00318 Ribosomal protein S2 NOVO_03175 PF01820 D-ala D-ala ligase N-terminus NOVO_03175 PF07478 D-ala D-ala ligase C-terminus NOVO_03180 PF03799 Cell division protein FtsQ NOVO_03180 PF08478 POTRA domain, FtsQ-type NOVO_03185 PF02491 SHS2 domain inserted in FTSA NOVO_03185 PF14450 Cell division protein FtsA NOVO_03205 PF02705 NOVO_03205 NOVO_03210 PF01710 Transposase NOVO_03215 PF13358 DDE superfamily endonuclease NOVO_03230 PF01551 Peptidase family M23 NOVO_03235 PF02405 NOVO_03235 NOVO_03240 PF00005 ABC transporter NOVO_03250 PF01227 GTP cyclohydrolase I NOVO_03260 PF02410 Oligomerisation domain NOVO_03265 PF00155 Aminotransferase class I and II NOVO_03270 PF02628 NOVO_03270 NOVO_03275 PF13500 AAA domain NOVO_03280 PF08241 Methyltransferase domain NOVO_03305 PF02233 NAD(P) transhydrogenase beta subunit NOVO_03310 PF12769 Domain of unknown function (DUF3814) NOVO_03315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NOVO_03315 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NOVO_03325 PF03922 OmpW family NOVO_03330 PF00005 ABC transporter NOVO_03335 PF00528 Binding-protein-dependent transport system inner membrane component NOVO_03340 PF00497 Bacterial extracellular solute-binding proteins, family 3 NOVO_03345 PF01812 5-formyltetrahydrofolate cyclo-ligase family NOVO_03350 PF02824 TGS domain NOVO_03350 PF04607 Region found in RelA / SpoT proteins NOVO_03350 PF13291 ACT domain NOVO_03350 PF13328 HD domain NOVO_03355 PF04314 Protein of unknown function (DUF461) NOVO_03360 PF00486 Transcriptional regulatory protein, C terminal NOVO_03365 PF00925 GTP cyclohydrolase II NOVO_03370 PF04972 BON domain NOVO_03375 PF03631 NOVO_03375 NOVO_03380 PF02534 Type IV secretory system Conjugative DNA transfer NOVO_03385 PF00437 Type II/IV secretion system protein NOVO_03390 PF03743 Bacterial conjugation TrbI-like protein NOVO_03395 PF03524 Conjugal transfer protein NOVO_03400 PF04335 VirB8 protein NOVO_03405 PF00571 CBS domain NOVO_03405 PF03471 Transporter associated domain NOVO_03410 PF02130 Uncharacterized protein family UPF0054 NOVO_03415 PF02562 PhoH-like protein NOVO_03430 PF17289 NOVO_03430 NOVO_03435 PF02096 60Kd inner membrane protein NOVO_03435 PF14849 YidC periplasmic domain NOVO_03440 PF01809 NOVO_03440 NOVO_03445 PF00825 Ribonuclease P NOVO_03450 PF00924 Mechanosensitive ion channel NOVO_03455 PF01710 Transposase NOVO_03460 PF13358 DDE superfamily endonuclease NOVO_03465 PF00023 Ankyrin repeat NOVO_03465 PF12796 Ankyrin repeats (3 copies) NOVO_03475 PF13531 Bacterial extracellular solute-binding protein NOVO_03480 PF00528 Binding-protein-dependent transport system inner membrane component NOVO_03485 PF00528 Binding-protein-dependent transport system inner membrane component NOVO_03490 PF00005 ABC transporter NOVO_03490 PF12857 NOVO_03490 NOVO_03505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NOVO_03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NOVO_03510 PF00892 EamA-like transporter family NOVO_03520 PF00133 tRNA synthetases class I (I, L, M and V) NOVO_03520 PF08264 Anticodon-binding domain of tRNA NOVO_03525 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NOVO_03525 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NOVO_03530 PF13847 Methyltransferase domain NOVO_03550 PF03364 Polyketide cyclase / dehydrase and lipid transport NOVO_03555 PF04055 Radical SAM superfamily NOVO_03555 PF16881 NOVO_03555 NOVO_03560 PF10879 NOVO_03560 NOVO_03565 PF13177 DNA polymerase III, delta subunit NOVO_03585 PF09361 NOVO_03585 NOVO_03590 PF08245 Mur ligase middle domain NOVO_03595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NOVO_03600 PF00829 Ribosomal prokaryotic L21 protein NOVO_03605 PF01016 Ribosomal L27 protein NOVO_03610 PF00809 Pterin binding enzyme NOVO_03615 PF02660 NOVO_03615 NOVO_03620 PF02618 YceG-like family NOVO_03625 PF00109 Beta-ketoacyl synthase, N-terminal domain NOVO_03625 PF02801 Beta-ketoacyl synthase, C-terminal domain NOVO_03630 PF00550 Phosphopantetheine attachment site NOVO_03635 PF13561 Enoyl-(Acyl carrier protein) reductase NOVO_03640 PF00180 Isocitrate/isopropylmalate dehydrogenase NOVO_03645 PF00005 ABC transporter NOVO_03645 PF00664 ABC transporter transmembrane region NOVO_03650 PF01491 Frataxin-like domain NOVO_03655 PF00905 Penicillin binding protein transpeptidase domain NOVO_03655 PF00912 Transglycosylase NOVO_03660 PF03067 Chitin binding domain NOVO_03665 PF00990 GGDEF domain NOVO_03665 PF08447 PAS fold NOVO_03670 PF01018 GTP1/OBG NOVO_03670 PF01926 50S ribosome-binding GTPase NOVO_03675 PF00571 CBS domain NOVO_03675 PF01595 NOVO_03675 NOVO_03675 PF03471 Transporter associated domain NOVO_03680 PF01202 Shikimate kinase NOVO_03685 PF00589 Phage integrase family NOVO_03685 PF02899 Phage integrase, N-terminal SAM-like domain NOVO_03690 PF10877 NOVO_03690 NOVO_03695 PF01715 IPP transferase NOVO_03700 PF00814 Glycoprotease family NOVO_03705 PF03922 OmpW family NOVO_03710 PF03922 OmpW family NOVO_03715 PF03922 OmpW family NOVO_03725 PF03922 OmpW family NOVO_03730 PF01544 CorA-like Mg2+ transporter protein NOVO_03740 PF00162 Phosphoglycerate kinase NOVO_03745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NOVO_03745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NOVO_03750 PF00456 Transketolase, thiamine diphosphate binding domain NOVO_03750 PF02779 Transketolase, pyrimidine binding domain NOVO_03750 PF02780 Transketolase, C-terminal domain NOVO_03755 PF06691 NOVO_03755 NOVO_03765 PF01790 NOVO_03765 NOVO_03770 PF04380 NOVO_03770 NOVO_03775 PF03807 NADP oxidoreductase coenzyme F420-dependent NOVO_03775 PF14748 Pyrroline-5-carboxylate reductase dimerisation NOVO_03780 PF13419 Haloacid dehalogenase-like hydrolase NOVO_03785 PF00072 Response regulator receiver domain NOVO_03785 PF00486 Transcriptional regulatory protein, C terminal NOVO_03810 PF04386 Stringent starvation protein B NOVO_03815 PF03279 NOVO_03815 NOVO_03820 PF01782 RimM N-terminal domain NOVO_03825 PF05170 NOVO_03825 NOVO_03830 PF01808 AICARFT/IMPCHase bienzyme NOVO_03830 PF02142 MGS-like domain NOVO_03840 PF02472 Biopolymer transport protein ExbD/TolR NOVO_03845 PF01618 NOVO_03845 NOVO_03850 PF00005 ABC transporter NOVO_03855 PF03968 OstA-like protein NOVO_03860 PF06835 Lipopolysaccharide-assembly, LptC-related NOVO_03865 PF00571 CBS domain NOVO_03865 PF01380 SIS domain NOVO_03870 PF01612 3'-5' exonuclease NOVO_03880 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase NOVO_03885 PF04977 Septum formation initiator NOVO_03890 PF00263 NOVO_03890 NOVO_03890 PF04972 BON domain NOVO_03900 PF00334 Nucleoside diphosphate kinase NOVO_03905 PF00583 Acetyltransferase (GNAT) family NOVO_03910 PF02582 NOVO_03910 NOVO_03915 PF05258 NOVO_03915 NOVO_03920 PF00293 NUDIX domain NOVO_03925 PF04748 Divergent polysaccharide deacetylase NOVO_03930 PF03572 Peptidase family S41 NOVO_03930 PF13180 PDZ domain NOVO_03935 PF00072 Response regulator receiver domain NOVO_03935 PF00990 GGDEF domain NOVO_03945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NOVO_03945 PF00364 Biotin-requiring enzyme NOVO_03945 PF02817 e3 binding domain NOVO_03950 PF02779 Transketolase, pyrimidine binding domain NOVO_03950 PF02780 Transketolase, C-terminal domain NOVO_03955 PF00676 Dehydrogenase E1 component NOVO_03960 PF13520 Amino acid permease NOVO_03965 PF13520 Amino acid permease NOVO_03970 PF03054 tRNA methyl transferase NOVO_03975 PF00348 Polyprenyl synthetase NOVO_03980 PF00291 Pyridoxal-phosphate dependent enzyme NOVO_03990 PF01710 Transposase NOVO_03995 PF13358 DDE superfamily endonuclease NOVO_04000 PF13599 Pentapeptide repeats (9 copies) NOVO_04010 PF09140 ATPase MipZ NOVO_04015 PF12100 NOVO_04015 NOVO_04020 PF00133 tRNA synthetases class I (I, L, M and V) NOVO_04020 PF08264 Anticodon-binding domain of tRNA NOVO_04020 PF09334 tRNA synthetases class I (M) NOVO_04020 PF13603 Leucyl-tRNA synthetase, Domain 2 NOVO_04030 PF00155 Aminotransferase class I and II NOVO_04035 PF08242 Methyltransferase domain NOVO_04040 PF13144 SAF-like NOVO_04045 PF02107 NOVO_04045 NOVO_04050 PF00156 Phosphoribosyl transferase domain NOVO_04055 PF00271 Helicase conserved C-terminal domain NOVO_04055 PF02151 UvrB/uvrC motif NOVO_04055 PF04851 Type III restriction enzyme, res subunit NOVO_04055 PF12344 Ultra-violet resistance protein B NOVO_04060 PF03797 Autotransporter beta-domain NOVO_04060 PF17170 NOVO_04060 NOVO_04070 PF00005 ABC transporter NOVO_04070 PF16326 NOVO_04070 NOVO_04080 PF02463 RecF/RecN/SMC N terminal domain NOVO_04085 PF00204 DNA gyrase B NOVO_04085 PF00986 DNA gyrase B subunit, carboxyl terminus NOVO_04085 PF01751 Toprim domain NOVO_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_04090 PF01648 4'-phosphopantetheinyl transferase superfamily NOVO_04095 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NOVO_04100 PF00849 RNA pseudouridylate synthase NOVO_04110 PF00633 Helix-hairpin-helix motif NOVO_04110 PF00730 HhH-GPD superfamily base excision DNA repair protein NOVO_04110 PF10576 Iron-sulfur binding domain of endonuclease III NOVO_04115 PF07345 Domain of unknown function (DUF1476) NOVO_04120 PF01259 SAICAR synthetase NOVO_04125 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NOVO_04130 PF13507 CobB/CobQ-like glutamine amidotransferase domain NOVO_04135 PF00586 AIR synthase related protein, N-terminal domain NOVO_04135 PF02769 AIR synthase related protein, C-terminal domain NOVO_04140 PF00534 Glycosyl transferases group 1 NOVO_04140 PF13439 Glycosyltransferase Family 4 NOVO_04150 PF01368 DHH family NOVO_04150 PF02272 DHHA1 domain NOVO_04155 PF01078 Magnesium chelatase, subunit ChlI NOVO_04155 PF13335 NOVO_04155 NOVO_04155 PF13541 Subunit ChlI of Mg-chelatase NOVO_04160 PF00572 Ribosomal protein L13 NOVO_04165 PF00380 Ribosomal protein S9/S16 NOVO_04170 PF00117 Glutamine amidotransferase class-I NOVO_04170 PF00958 GMP synthase C terminal domain NOVO_04170 PF02540 NAD synthase NOVO_04175 PF00091 Tubulin/FtsZ family, GTPase domain NOVO_04175 PF12327 FtsZ family, C-terminal domain NOVO_04180 PF02021 Uncharacterised protein family UPF0102 NOVO_04190 PF00665 Integrase core domain NOVO_04200 PF01979 Amidohydrolase family NOVO_04205 PF13419 Haloacid dehalogenase-like hydrolase NOVO_04210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NOVO_04215 PF13458 Periplasmic binding protein NOVO_04225 PF04384 Iron-sulphur cluster assembly NOVO_04230 PF01243 Pyridoxamine 5'-phosphate oxidase NOVO_04230 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NOVO_04235 PF03739 NOVO_04235 NOVO_04240 PF03092 NOVO_04240 NOVO_04245 PF05491 Holliday junction DNA helicase ruvB C-terminus NOVO_04245 PF05496 Holliday junction DNA helicase ruvB N-terminus NOVO_04250 PF01330 RuvA N terminal domain NOVO_04250 PF07499 RuvA, C-terminal domain NOVO_04250 PF14520 Helix-hairpin-helix domain NOVO_04255 PF02075 Crossover junction endodeoxyribonuclease RuvC NOVO_04260 PF01709 Transcriptional regulator NOVO_04265 PF02545 Maf-like protein NOVO_04270 PF01176 Translation initiation factor 1A / IF-1 NOVO_04275 PF13242 HAD-hyrolase-like NOVO_04275 PF13344 Haloacid dehalogenase-like hydrolase NOVO_04280 PF02195 ParB-like nuclease domain NOVO_04285 PF13614 AAA domain NOVO_04290 PF02527 rRNA small subunit methyltransferase G NOVO_04295 PF01134 Glucose inhibited division protein A NOVO_04295 PF13932 GidA associated domain 3 NOVO_04300 PF00535 Glycosyl transferase family 2 NOVO_04305 PF00534 Glycosyl transferases group 1 NOVO_04305 PF13439 Glycosyltransferase Family 4 NOVO_04310 PF12146 Putative lysophospholipase NOVO_04315 PF02578 Multi-copper polyphenol oxidoreductase laccase NOVO_04320 PF01578 NOVO_04320 NOVO_04325 PF00037 4Fe-4S binding domain NOVO_04325 PF11953 Domain of unknown function (DUF3470) NOVO_04330 PF01435 Peptidase family M48 NOVO_04335 PF03702 Uncharacterised protein family (UPF0075) NOVO_04355 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NOVO_04360 PF02152 Dihydroneopterin aldolase NOVO_04365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NOVO_04365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NOVO_04370 PF02504 Fatty acid synthesis protein NOVO_04375 PF01783 Ribosomal L32p protein family NOVO_04380 PF04355 SmpA / OmlA family NOVO_04385 PF00227 Proteasome subunit NOVO_04390 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_04390 PF07724 AAA domain (Cdc48 subfamily) NOVO_04390 PF10431 C-terminal, D2-small domain, of ClpB protein NOVO_04395 PF10017 NOVO_04395 NOVO_04400 PF00512 His Kinase A (phospho-acceptor) domain NOVO_04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_04405 PF00072 Response regulator receiver domain NOVO_04410 PF02698 DUF218 domain NOVO_04415 PF03099 Biotin/lipoate A/B protein ligase family NOVO_04420 PF13174 Tetratricopeptide repeat NOVO_04420 PF13181 Tetratricopeptide repeat NOVO_04425 PF04052 TolB amino-terminal domain NOVO_04425 PF07676 WD40-like Beta Propeller Repeat NOVO_04435 PF00691 OmpA family NOVO_04445 PF00551 Formyl transferase NOVO_04445 PF02911 Formyl transferase, C-terminal domain NOVO_04450 PF01327 Polypeptide deformylase NOVO_04455 PF07690 Major Facilitator Superfamily NOVO_04460 PF01810 NOVO_04460 NOVO_04465 PF13085 2Fe-2S iron-sulfur cluster binding domain NOVO_04465 PF13534 4Fe-4S dicluster domain NOVO_04470 PF00890 FAD binding domain NOVO_04470 PF02910 Fumarate reductase flavoprotein C-term NOVO_04475 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NOVO_04480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NOVO_04485 PF00483 Nucleotidyl transferase NOVO_04500 PF02367 Uncharacterised P-loop hydrolase UPF0079 NOVO_04505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NOVO_04515 PF10859 NOVO_04515 NOVO_04520 PF02556 Preprotein translocase subunit SecB NOVO_04525 PF04280 Tim44-like domain NOVO_04530 PF03562 MltA specific insert domain NOVO_04530 PF06725 3D domain NOVO_04535 PF13975 NOVO_04535 NOVO_04540 PF00462 Glutaredoxin NOVO_04545 PF00072 Response regulator receiver domain NOVO_04550 PF13413 Helix-turn-helix domain NOVO_04560 PF00929 Exonuclease NOVO_04565 PF01121 Dephospho-CoA kinase NOVO_04570 PF03618 NOVO_04570 NOVO_04575 PF01208 Uroporphyrinogen decarboxylase (URO-D) NOVO_04580 PF00762 Ferrochelatase NOVO_04585 PF03653 NOVO_04585 NOVO_04590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NOVO_04590 PF07497 Rho termination factor, RNA-binding domain NOVO_04590 PF07498 Rho termination factor, N-terminal domain NOVO_04595 PF00056 lactate/malate dehydrogenase, NAD binding domain NOVO_04595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NOVO_04600 PF00549 CoA-ligase NOVO_04600 PF08442 ATP-grasp domain NOVO_04605 PF00549 CoA-ligase NOVO_04605 PF02629 CoA binding domain NOVO_04610 PF00676 Dehydrogenase E1 component NOVO_04610 PF02779 Transketolase, pyrimidine binding domain NOVO_04610 PF16078 NOVO_04610 NOVO_04610 PF16870 NOVO_04610 NOVO_04615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NOVO_04615 PF00364 Biotin-requiring enzyme NOVO_04615 PF02817 e3 binding domain NOVO_04620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NOVO_04620 PF07992 Pyridine nucleotide-disulphide oxidoreductase NOVO_04625 PF00830 Ribosomal L28 family NOVO_04630 PF01197 Ribosomal protein L31 NOVO_04635 PF02470 NOVO_04635 NOVO_04640 PF05071 NOVO_04640 NOVO_04645 PF00075 RNase H NOVO_04650 PF00579 tRNA synthetases class I (W and Y) NOVO_04655 PF13365 Trypsin-like peptidase domain NOVO_04660 PF01710 Transposase NOVO_04665 PF13358 DDE superfamily endonuclease NOVO_04675 PF01702 Queuine tRNA-ribosyltransferase NOVO_04690 PF13358 DDE superfamily endonuclease NOVO_04695 PF01710 Transposase NOVO_04700 PF03601 NOVO_04700 NOVO_04705 PF08173 NOVO_04705 NOVO_04710 PF02322 NOVO_04710 NOVO_04715 PF01654 NOVO_04715 NOVO_04730 PF01551 Peptidase family M23 NOVO_04740 PF16363 NOVO_04740 NOVO_04745 PF00342 Phosphoglucose isomerase NOVO_04750 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NOVO_04755 PF01728 FtsJ-like methyltransferase NOVO_04760 PF06258 NOVO_04760 NOVO_04765 PF07330 NOVO_04765 NOVO_04770 PF13561 Enoyl-(Acyl carrier protein) reductase NOVO_04775 PF00438 S-adenosylmethionine synthetase, N-terminal domain NOVO_04775 PF02772 S-adenosylmethionine synthetase, central domain NOVO_04775 PF02773 S-adenosylmethionine synthetase, C-terminal domain NOVO_04785 PF01710 Transposase NOVO_04790 PF13358 DDE superfamily endonuclease NOVO_04795 PF12796 Ankyrin repeats (3 copies) NOVO_04795 PF13637 Ankyrin repeats (many copies) NOVO_04800 PF00579 tRNA synthetases class I (W and Y) NOVO_04805 PF02609 Exonuclease VII small subunit NOVO_04810 PF04800 ETC complex I subunit conserved region NOVO_04815 PF01899 NOVO_04815 NOVO_04830 PF14518 Iron-containing redox enzyme NOVO_04835 PF01476 LysM domain NOVO_04845 PF01710 Transposase NOVO_04850 PF13358 DDE superfamily endonuclease NOVO_04855 PF06325 Ribosomal protein L11 methyltransferase (PrmA) NOVO_04860 PF00535 Glycosyl transferase family 2 NOVO_04865 PF03706 NOVO_04865 NOVO_04870 PF00472 RF-1 domain NOVO_04870 PF03462 PCRF domain NOVO_04875 PF01106 NifU-like domain NOVO_04875 PF08712 Scaffold protein Nfu/NifU N terminal NOVO_04885 PF01323 DSBA-like thioredoxin domain NOVO_04895 PF01040 UbiA prenyltransferase family NOVO_04900 PF02602 Uroporphyrinogen-III synthase HemD NOVO_04905 PF09731 NOVO_04905 NOVO_04915 PF03918 Cytochrome C biogenesis protein NOVO_04920 PF00578 AhpC/TSA family NOVO_04925 PF01578 NOVO_04925 NOVO_04925 PF16327 NOVO_04925 NOVO_04940 PF00483 Nucleotidyl transferase NOVO_04940 PF01050 Mannose-6-phosphate isomerase NOVO_04945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NOVO_04945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NOVO_04945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NOVO_04945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NOVO_04950 PF13437 HlyD family secretion protein NOVO_04950 PF13533 Biotin-lipoyl like NOVO_04955 PF00005 ABC transporter NOVO_04955 PF00664 ABC transporter transmembrane region NOVO_04965 PF00719 Inorganic pyrophosphatase NOVO_04970 PF00923 Transaldolase NOVO_04975 PF01250 Ribosomal protein S6 NOVO_04980 PF01084 Ribosomal protein S18 NOVO_04985 PF01281 Ribosomal protein L9, N-terminal domain NOVO_04985 PF03948 Ribosomal protein L9, C-terminal domain NOVO_04990 PF00665 Integrase core domain NOVO_04995 PF01230 HIT domain NOVO_05000 PF01416 tRNA pseudouridine synthase NOVO_05005 PF12796 Ankyrin repeats (3 copies) NOVO_05010 PF04932 NOVO_05010 NOVO_05015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NOVO_05015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NOVO_05020 PF00072 Response regulator receiver domain NOVO_05020 PF00512 His Kinase A (phospho-acceptor) domain NOVO_05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_05020 PF13426 PAS domain NOVO_05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_05030 PF00072 Response regulator receiver domain NOVO_05035 PF01171 PP-loop family NOVO_05040 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_05040 PF01434 Peptidase family M41 NOVO_05040 PF06480 FtsH Extracellular NOVO_05045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NOVO_05045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NOVO_05045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NOVO_05045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NOVO_05050 PF01113 Dihydrodipicolinate reductase, N-terminus NOVO_05050 PF05173 Dihydrodipicolinate reductase, C-terminus NOVO_05055 PF10947 NOVO_05055 NOVO_05060 PF01571 Aminomethyltransferase folate-binding domain NOVO_05060 PF08669 Glycine cleavage T-protein C-terminal barrel domain NOVO_05065 PF00375 Sodium:dicarboxylate symporter family NOVO_05070 PF07559 Flagellar basal body protein FlaE NOVO_05075 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NOVO_05080 PF02082 Transcriptional regulator NOVO_05085 PF00266 Aminotransferase class-V NOVO_05090 PF00266 Aminotransferase class-V NOVO_05095 PF01592 NifU-like N terminal domain NOVO_05100 PF01521 Iron-sulphur cluster biosynthesis NOVO_05105 PF00226 DnaJ domain NOVO_05105 PF07743 HSCB C-terminal oligomerisation domain NOVO_05110 PF00012 Hsp70 protein NOVO_05115 PF00111 2Fe-2S iron-sulfur cluster binding domain NOVO_05125 PF13181 Tetratricopeptide repeat NOVO_05130 PF02416 mttA/Hcf106 family NOVO_05135 PF00905 Penicillin binding protein transpeptidase domain NOVO_05135 PF00912 Transglycosylase NOVO_05135 PF17092 NOVO_05135 NOVO_05140 PF00534 Glycosyl transferases group 1 NOVO_05155 PF03352 Methyladenine glycosylase NOVO_05165 PF00709 Adenylosuccinate synthetase NOVO_05170 PF13847 Methyltransferase domain NOVO_05175 PF01523 Putative modulator of DNA gyrase NOVO_05180 PF00005 ABC transporter NOVO_05180 PF00664 ABC transporter transmembrane region NOVO_05185 PF00478 IMP dehydrogenase / GMP reductase domain NOVO_05185 PF00571 CBS domain NOVO_05190 PF02230 Phospholipase/Carboxylesterase NOVO_05195 PF02686 Glu-tRNAGln amidotransferase C subunit NOVO_05200 PF01425 Amidase NOVO_05205 PF02637 GatB domain NOVO_05205 PF02934 GatB/GatE catalytic domain NOVO_05210 PF07690 Major Facilitator Superfamily NOVO_05215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NOVO_05220 PF13515 NOVO_05220 NOVO_05225 PF13489 Methyltransferase domain NOVO_05235 PF02705 NOVO_05235 NOVO_05240 PF13358 DDE superfamily endonuclease NOVO_05245 PF01710 Transposase NOVO_05250 PF13857 Ankyrin repeats (many copies) NOVO_05260 PF00202 Aminotransferase class-III NOVO_05265 PF01052 Surface presentation of antigens (SPOA) NOVO_05270 PF02108 NOVO_05270 NOVO_05275 PF01706 FliG C-terminal domain NOVO_05275 PF14841 FliG middle domain NOVO_05275 PF14842 FliG N-terminal domain NOVO_05280 PF01514 Secretory protein of YscJ/FliF family NOVO_05280 PF08345 NOVO_05280 NOVO_05285 PF03379 NOVO_05285 NOVO_05290 PF00132 Bacterial transferase hexapeptide (six repeats) NOVO_05290 PF12804 MobA-like NTP transferase domain NOVO_05290 PF14602 Hexapeptide repeat of succinyl-transferase NOVO_05300 PF02646 NOVO_05300 NOVO_05310 PF01218 Coproporphyrinogen III oxidase NOVO_05315 PF05233 NOVO_05315 NOVO_05315 PF07879 NOVO_05315 NOVO_05330 PF07166 Protein of unknown function (DUF1398) NOVO_05335 PF12802 MarR family NOVO_05345 PF02592 NOVO_05345 NOVO_05350 PF00534 Glycosyl transferases group 1 NOVO_05350 PF13439 Glycosyltransferase Family 4 NOVO_05355 PF01436 NHL repeat NOVO_05360 PF03797 Autotransporter beta-domain NOVO_05365 PF01926 50S ribosome-binding GTPase NOVO_05365 PF10396 GTP-binding protein TrmE N-terminus NOVO_05365 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE NOVO_05370 PF05088 NOVO_05370 NOVO_05380 PF07313 Protein of unknown function (DUF1460) NOVO_05385 PF07690 Major Facilitator Superfamily NOVO_05390 PF01546 Peptidase family M20/M25/M40 NOVO_05390 PF07687 Peptidase dimerisation domain NOVO_05395 PF00132 Bacterial transferase hexapeptide (six repeats) NOVO_05395 PF14602 Hexapeptide repeat of succinyl-transferase NOVO_05395 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NOVO_05400 PF13717 NOVO_05400 NOVO_05405 PF13533 Biotin-lipoyl like NOVO_05405 PF16576 NOVO_05405 NOVO_05430 PF00005 ABC transporter NOVO_05435 PF03092 NOVO_05435 NOVO_05455 PF07690 Major Facilitator Superfamily NOVO_05460 PF00106 short chain dehydrogenase NOVO_05470 PF00226 DnaJ domain NOVO_05480 PF01710 Transposase NOVO_05485 PF13358 DDE superfamily endonuclease NOVO_05495 PF15524 NOVO_05495 NOVO_05505 PF00491 Arginase family NOVO_05510 PF01551 Peptidase family M23 NOVO_05525 PF06144 DNA polymerase III, delta subunit NOVO_05530 PF01427 D-ala-D-ala dipeptidase NOVO_05535 PF03739 NOVO_05535 NOVO_05540 PF04453 Organic solvent tolerance protein NOVO_05545 PF13624 SurA N-terminal domain NOVO_05550 PF01207 Dihydrouridine synthase (Dus) NOVO_05560 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_05560 PF02861 Clp amino terminal domain NOVO_05560 PF07724 AAA domain (Cdc48 subfamily) NOVO_05560 PF10431 C-terminal, D2-small domain, of ClpB protein NOVO_05565 PF01569 PAP2 superfamily NOVO_05570 PF03772 NOVO_05570 NOVO_05580 PF01883 Domain of unknown function DUF59 NOVO_05580 PF10609 ParA/MinD ATPase like NOVO_05585 PF01145 SPFH domain / Band 7 family NOVO_05590 PF01145 SPFH domain / Band 7 family NOVO_05595 PF13180 PDZ domain NOVO_05595 PF13365 Trypsin-like peptidase domain NOVO_05600 PF13462 Thioredoxin NOVO_05610 PF13592 NOVO_05610 NOVO_05620 PF10276 Zinc-finger domain NOVO_05625 PF00106 short chain dehydrogenase NOVO_05630 PF00156 Phosphoribosyl transferase domain NOVO_05630 PF13537 Glutamine amidotransferase domain NOVO_05635 PF02674 NOVO_05635 NOVO_05640 PF03641 Possible lysine decarboxylase NOVO_05645 PF02666 NOVO_05645 NOVO_05650 PF01066 CDP-alcohol phosphatidyltransferase NOVO_05650 PF08009 NOVO_05650 NOVO_05660 PF00805 Pentapeptide repeats (8 copies) NOVO_05660 PF13599 Pentapeptide repeats (9 copies) NOVO_05675 PF01411 tRNA synthetases class II (A) NOVO_05675 PF02272 DHHA1 domain NOVO_05675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NOVO_05680 PF01370 NAD dependent epimerase/dehydratase family NOVO_05685 PF01551 Peptidase family M23 NOVO_05710 PF01494 FAD binding domain NOVO_05715 PF10017 NOVO_05715 NOVO_05720 PF00072 Response regulator receiver domain NOVO_05720 PF00512 His Kinase A (phospho-acceptor) domain NOVO_05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_05730 PF00023 Ankyrin repeat NOVO_05730 PF12796 Ankyrin repeats (3 copies) NOVO_05740 PF06210 NOVO_05740 NOVO_05755 PF07167 NOVO_05755 NOVO_05760 PF02401 LytB protein NOVO_05765 PF02325 NOVO_05765 NOVO_05775 PF00814 Glycoprotease family NOVO_05780 PF01144 Coenzyme A transferase NOVO_05785 PF01144 Coenzyme A transferase NOVO_05790 PF00884 Sulfatase NOVO_05790 PF08019 NOVO_05790 NOVO_05795 PF00023 Ankyrin repeat NOVO_05795 PF12796 Ankyrin repeats (3 copies) NOVO_05800 PF00069 Protein kinase domain NOVO_05815 PF09361 NOVO_05815 NOVO_05820 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_05820 PF02861 Clp amino terminal domain NOVO_05820 PF07724 AAA domain (Cdc48 subfamily) NOVO_05820 PF10431 C-terminal, D2-small domain, of ClpB protein NOVO_05835 PF14437 NOVO_05835 NOVO_05840 PF01545 Cation efflux family NOVO_05840 PF16916 NOVO_05840 NOVO_05845 PF16998 NOVO_05845 NOVO_05855 PF00665 Integrase core domain NOVO_05860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NOVO_05860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NOVO_05865 PF13561 Enoyl-(Acyl carrier protein) reductase NOVO_05870 PF00108 Thiolase, N-terminal domain NOVO_05870 PF02803 Thiolase, C-terminal domain NOVO_05880 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel NOVO_05880 PF05036 Sporulation related domain NOVO_05890 PF00113 Enolase, C-terminal TIM barrel domain NOVO_05890 PF03952 Enolase, N-terminal domain NOVO_05900 PF00444 Ribosomal protein L36 NOVO_05905 PF01380 SIS domain NOVO_05905 PF13522 Glutamine amidotransferase domain NOVO_05910 PF00580 UvrD/REP helicase N-terminal domain NOVO_05910 PF13361 UvrD-like helicase C-terminal domain NOVO_05915 PF00490 Delta-aminolevulinic acid dehydratase NOVO_05930 PF01523 Putative modulator of DNA gyrase NOVO_05935 PF00005 ABC transporter NOVO_05935 PF00664 ABC transporter transmembrane region NOVO_05940 PF00578 AhpC/TSA family NOVO_05950 PF04551 GcpE protein NOVO_05955 PF00578 AhpC/TSA family NOVO_05960 PF00132 Bacterial transferase hexapeptide (six repeats) NOVO_05965 PF00953 Glycosyl transferase family 4 NOVO_05970 PF00512 His Kinase A (phospho-acceptor) domain NOVO_05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_05975 PF02655 ATP-grasp domain NOVO_05980 PF13358 DDE superfamily endonuclease NOVO_05985 PF01710 Transposase NOVO_05990 PF03797 Autotransporter beta-domain NOVO_06000 PF01710 Transposase NOVO_06005 PF13358 DDE superfamily endonuclease NOVO_06010 PF13637 Ankyrin repeats (many copies) NOVO_06015 PF02104 NOVO_06015 NOVO_06025 PF13358 DDE superfamily endonuclease NOVO_06030 PF01710 Transposase NOVO_06040 PF08886 Glutamate-cysteine ligase NOVO_06045 PF04452 RNA methyltransferase NOVO_06050 PF00270 DEAD/DEAH box helicase NOVO_06050 PF00271 Helicase conserved C-terminal domain NOVO_06050 PF17191 NOVO_06050 NOVO_06055 PF00665 Integrase core domain NOVO_06060 PF00691 OmpA family NOVO_06060 PF13677 NOVO_06060 NOVO_06065 PF01618 NOVO_06065 NOVO_06070 PF01613 Flavin reductase like domain NOVO_06075 PF01926 50S ribosome-binding GTPase NOVO_06080 PF00588 SpoU rRNA Methylase family NOVO_06080 PF08032 RNA 2'-O ribose methyltransferase substrate binding NOVO_06095 PF00009 Elongation factor Tu GTP binding domain NOVO_06095 PF03143 Elongation factor Tu C-terminal domain NOVO_06095 PF03144 Elongation factor Tu domain 2 NOVO_06100 PF00338 Ribosomal protein S10p/S20e NOVO_06105 PF00297 Ribosomal protein L3 NOVO_06110 PF00573 Ribosomal protein L4/L1 family NOVO_06115 PF00276 Ribosomal protein L23 NOVO_06120 PF00181 Ribosomal Proteins L2, RNA binding domain NOVO_06120 PF03947 Ribosomal Proteins L2, C-terminal domain NOVO_06125 PF00203 Ribosomal protein S19 NOVO_06130 PF00237 Ribosomal protein L22p/L17e NOVO_06135 PF00189 Ribosomal protein S3, C-terminal domain NOVO_06135 PF07650 KH domain NOVO_06140 PF00252 Ribosomal protein L16p/L10e NOVO_06145 PF00831 Ribosomal L29 protein NOVO_06150 PF00366 Ribosomal protein S17 NOVO_06155 PF00238 Ribosomal protein L14p/L23e NOVO_06160 PF00467 KOW motif NOVO_06160 PF17136 NOVO_06160 NOVO_06165 PF00281 Ribosomal protein L5 NOVO_06165 PF00673 ribosomal L5P family C-terminus NOVO_06170 PF00253 Ribosomal protein S14p/S29e NOVO_06175 PF00410 Ribosomal protein S8 NOVO_06180 PF00347 Ribosomal protein L6 NOVO_06185 PF00861 Ribosomal L18p/L5e family NOVO_06190 PF00333 Ribosomal protein S5, N-terminal domain NOVO_06190 PF03719 Ribosomal protein S5, C-terminal domain NOVO_06195 PF00327 Ribosomal protein L30p/L7e NOVO_06200 PF00828 Ribosomal protein L18e/L15 NOVO_06205 PF00344 SecY translocase NOVO_06210 PF00406 Adenylate kinase NOVO_06210 PF05191 Adenylate kinase, active site lid NOVO_06215 PF00416 Ribosomal protein S13/S18 NOVO_06220 PF00411 Ribosomal protein S11 NOVO_06225 PF01000 RNA polymerase Rpb3/RpoA insert domain NOVO_06225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NOVO_06225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NOVO_06230 PF01196 Ribosomal protein L17 NOVO_06235 PF00892 EamA-like transporter family NOVO_06240 PF03239 NOVO_06240 NOVO_06245 PF13473 Cupredoxin-like domain NOVO_06250 PF00707 Translation initiation factor IF-3, C-terminal domain NOVO_06250 PF05198 Translation initiation factor IF-3, N-terminal domain NOVO_06260 PF00571 CBS domain NOVO_06260 PF01769 Divalent cation transporter NOVO_06260 PF03448 MgtE intracellular N domain NOVO_06280 PF01710 Transposase NOVO_06285 PF13358 DDE superfamily endonuclease NOVO_06295 PF00183 Hsp90 protein NOVO_06295 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_06305 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NOVO_06305 PF13641 Glycosyltransferase like family 2 NOVO_06315 PF00023 Ankyrin repeat NOVO_06315 PF12796 Ankyrin repeats (3 copies) NOVO_06315 PF13637 Ankyrin repeats (many copies) NOVO_06320 PF01734 Patatin-like phospholipase NOVO_06325 PF06314 Acetoacetate decarboxylase (ADC) NOVO_06330 PF00072 Response regulator receiver domain NOVO_06330 PF00512 His Kinase A (phospho-acceptor) domain NOVO_06330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_06355 PF00665 Integrase core domain NOVO_06375 PF04055 Radical SAM superfamily NOVO_06375 PF06968 Biotin and Thiamin Synthesis associated domain NOVO_06380 PF00884 Sulfatase NOVO_06380 PF08019 NOVO_06380 NOVO_06385 PF01230 HIT domain NOVO_06400 PF03652 Uncharacterised protein family (UPF0081) NOVO_06405 PF00005 ABC transporter NOVO_06410 PF01926 50S ribosome-binding GTPase NOVO_06410 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NOVO_06415 PF13360 PQQ-like domain NOVO_06425 PF08264 Anticodon-binding domain of tRNA NOVO_06425 PF09334 tRNA synthetases class I (M) NOVO_06430 PF01026 TatD related DNase NOVO_06435 PF01725 Ham1 family NOVO_06440 PF01138 3' exoribonuclease family, domain 1 NOVO_06440 PF03725 3' exoribonuclease family, domain 2 NOVO_06445 PF01025 GrpE NOVO_06450 PF00793 DAHP synthetase I family NOVO_06455 PF01521 Iron-sulphur cluster biosynthesis NOVO_06480 PF06271 NOVO_06480 NOVO_06485 PF00288 GHMP kinases N terminal domain NOVO_06485 PF08544 GHMP kinases C terminal NOVO_06490 PF03524 Conjugal transfer protein NOVO_06495 PF04335 VirB8 protein NOVO_06500 PF00206 Lyase NOVO_06500 PF10415 Fumarase C C-terminus NOVO_06505 PF01739 CheR methyltransferase, SAM binding domain NOVO_06505 PF03705 CheR methyltransferase, all-alpha domain NOVO_06510 PF00072 Response regulator receiver domain NOVO_06510 PF01339 CheB methylesterase NOVO_06515 PF00072 Response regulator receiver domain NOVO_06520 PF01584 CheW-like domain NOVO_06525 PF00072 Response regulator receiver domain NOVO_06525 PF01584 CheW-like domain NOVO_06525 PF01627 Hpt domain NOVO_06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_06525 PF02895 Signal transducing histidine kinase, homodimeric domain NOVO_06530 PF10090 Uncharacterized protein conserved in bacteria (DUF2328) NOVO_06540 PF02902 Ulp1 protease family, C-terminal catalytic domain NOVO_06540 PF13180 PDZ domain NOVO_06550 PF01807 CHC2 zinc finger NOVO_06550 PF08275 DNA primase catalytic core, N-terminal domain NOVO_06550 PF13662 Toprim domain NOVO_06555 PF00140 Sigma-70 factor, region 1 NOVO_06555 PF03979 Sigma-70 factor, region 1 NOVO_06555 PF04539 Sigma-70 region 3 NOVO_06555 PF04542 Sigma-70 region 2 NOVO_06555 PF04545 Sigma-70, region 4 NOVO_06555 PF04546 Sigma-70, non-essential region NOVO_06560 PF01569 PAP2 superfamily NOVO_06565 PF13302 Acetyltransferase (GNAT) domain NOVO_06570 PF02559 CarD-like/TRCF domain NOVO_06575 PF00120 Glutamine synthetase, catalytic domain NOVO_06575 PF03951 Glutamine synthetase, beta-Grasp domain NOVO_06585 PF13523 Acetyltransferase (GNAT) domain NOVO_06600 PF00206 Lyase NOVO_06600 PF10397 Adenylosuccinate lyase C-terminus NOVO_06605 PF00459 Inositol monophosphatase family NOVO_06610 PF02565 Recombination protein O C terminal NOVO_06610 PF11967 Recombination protein O N terminal NOVO_06615 PF01722 BolA-like protein NOVO_06620 PF00696 Amino acid kinase family NOVO_06620 PF13840 ACT domain NOVO_06625 PF01464 Transglycosylase SLT domain NOVO_06635 PF00156 Phosphoribosyl transferase domain NOVO_06655 PF06935 NOVO_06655 NOVO_06660 PF08241 Methyltransferase domain NOVO_06665 PF13857 Ankyrin repeats (many copies) NOVO_06670 PF08241 Methyltransferase domain NOVO_06680 PF00072 Response regulator receiver domain NOVO_06680 PF00512 His Kinase A (phospho-acceptor) domain NOVO_06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_06695 PF12796 Ankyrin repeats (3 copies) NOVO_06695 PF13637 Ankyrin repeats (many copies) NOVO_06700 PF13358 DDE superfamily endonuclease NOVO_06705 PF01710 Transposase NOVO_06715 PF01596 O-methyltransferase NOVO_06720 PF00625 Guanylate kinase NOVO_06725 PF00106 short chain dehydrogenase NOVO_06740 PF07167 NOVO_06740 NOVO_06745 PF00072 Response regulator receiver domain NOVO_06745 PF00486 Transcriptional regulatory protein, C terminal NOVO_06750 PF02132 RecR protein NOVO_06750 PF13662 Toprim domain NOVO_06755 PF02575 YbaB/EbfC DNA-binding family NOVO_06760 PF12169 DNA polymerase III subunits gamma and tau domain III NOVO_06760 PF12362 NOVO_06760 NOVO_06760 PF13177 DNA polymerase III, delta subunit NOVO_06785 PF01406 tRNA synthetases class I (C) catalytic domain NOVO_06785 PF09190 DALR domain NOVO_06790 PF00588 SpoU rRNA Methylase family NOVO_06795 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family NOVO_06800 PF12796 Ankyrin repeats (3 copies) NOVO_06805 PF00933 Glycosyl hydrolase family 3 N terminal domain NOVO_06825 PF13358 DDE superfamily endonuclease NOVO_06830 PF01710 Transposase NOVO_06850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NOVO_06850 PF02824 TGS domain NOVO_06850 PF03129 Anticodon binding domain NOVO_06850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NOVO_06855 PF05164 Cell division protein ZapA NOVO_06865 PF01343 Peptidase family S49 NOVO_06870 PF02091 Glycyl-tRNA synthetase alpha subunit NOVO_06875 PF02092 NOVO_06875 NOVO_06875 PF05746 DALR anticodon binding domain NOVO_06880 PF00391 PEP-utilising enzyme, mobile domain NOVO_06880 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NOVO_06880 PF02896 PEP-utilising enzyme, TIM barrel domain NOVO_06885 PF00072 Response regulator receiver domain NOVO_06885 PF00158 Sigma-54 interaction domain NOVO_06885 PF02954 Bacterial regulatory protein, Fis family NOVO_06890 PF01255 Putative undecaprenyl diphosphate synthase NOVO_06895 PF01148 Cytidylyltransferase family NOVO_06905 PF03023 NOVO_06905 NOVO_06910 PF12796 Ankyrin repeats (3 copies) NOVO_06915 PF09923 NOVO_06915 NOVO_06920 PF00768 D-alanyl-D-alanine carboxypeptidase NOVO_06920 PF07943 Penicillin-binding protein 5, C-terminal domain NOVO_06925 PF00768 D-alanyl-D-alanine carboxypeptidase NOVO_06930 PF07690 Major Facilitator Superfamily NOVO_06935 PF07690 Major Facilitator Superfamily NOVO_06940 PF13533 Biotin-lipoyl like NOVO_06940 PF16576 NOVO_06940 NOVO_06945 PF13411 MerR HTH family regulatory protein NOVO_06950 PF00528 Binding-protein-dependent transport system inner membrane component NOVO_06955 PF00528 Binding-protein-dependent transport system inner membrane component NOVO_06955 PF11812 NOVO_06955 NOVO_06960 PF02016 LD-carboxypeptidase NOVO_06965 PF00005 ABC transporter NOVO_06970 PF00072 Response regulator receiver domain NOVO_06970 PF00486 Transcriptional regulatory protein, C terminal NOVO_06975 PF00462 Glutaredoxin NOVO_06980 PF01722 BolA-like protein NOVO_06990 PF13525 Outer membrane lipoprotein NOVO_06995 PF02463 RecF/RecN/SMC N terminal domain NOVO_07000 PF06689 ClpX C4-type zinc finger NOVO_07000 PF07724 AAA domain (Cdc48 subfamily) NOVO_07000 PF10431 C-terminal, D2-small domain, of ClpB protein NOVO_07005 PF00574 Clp protease NOVO_07010 PF00120 Glutamine synthetase, catalytic domain NOVO_07015 PF00561 alpha/beta hydrolase fold NOVO_07020 PF00805 Pentapeptide repeats (8 copies) NOVO_07030 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NOVO_07030 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NOVO_07035 PF00115 Cytochrome C and Quinol oxidase polypeptide I NOVO_07040 PF00009 Elongation factor Tu GTP binding domain NOVO_07040 PF00679 Elongation factor G C-terminus NOVO_07040 PF03144 Elongation factor Tu domain 2 NOVO_07040 PF06421 GTP-binding protein LepA C-terminus NOVO_07055 PF01551 Peptidase family M23 NOVO_07060 PF03060 Nitronate monooxygenase NOVO_07065 PF00270 DEAD/DEAH box helicase NOVO_07065 PF00271 Helicase conserved C-terminal domain NOVO_07065 PF02559 CarD-like/TRCF domain NOVO_07065 PF03461 TRCF domain NOVO_07075 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_07075 PF02190 ATP-dependent protease La (LON) domain NOVO_07075 PF05362 Lon protease (S16) C-terminal proteolytic domain NOVO_07080 PF00216 Bacterial DNA-binding protein NOVO_07090 PF02810 SEC-C motif NOVO_07090 PF13844 Glycosyl transferase family 41 NOVO_07095 PF13443 Cro/C1-type HTH DNA-binding domain NOVO_07105 PF00005 ABC transporter NOVO_07105 PF12848 ABC transporter NOVO_07115 PF13358 DDE superfamily endonuclease NOVO_07120 PF01710 Transposase NOVO_07130 PF00849 RNA pseudouridylate synthase NOVO_07135 PF03167 Uracil DNA glycosylase superfamily NOVO_07140 PF01180 Dihydroorotate dehydrogenase NOVO_07145 PF02222 ATP-grasp domain NOVO_07150 PF00731 AIR carboxylase NOVO_07160 PF12796 Ankyrin repeats (3 copies) NOVO_07170 PF00795 Carbon-nitrogen hydrolase NOVO_07175 PF00692 dUTPase NOVO_07185 PF07722 Peptidase C26 NOVO_07190 PF01926 50S ribosome-binding GTPase NOVO_07190 PF07650 KH domain NOVO_07195 PF13649 Methyltransferase domain NOVO_07205 PF01710 Transposase NOVO_07210 PF13358 DDE superfamily endonuclease NOVO_07215 PF12796 Ankyrin repeats (3 copies) NOVO_07225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NOVO_07225 PF02874 ATP synthase alpha/beta family, beta-barrel domain NOVO_07235 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NOVO_07235 PF14572 Phosphoribosyl synthetase-associated domain NOVO_07240 PF01386 Ribosomal L25p family NOVO_07240 PF14693 Ribosomal protein TL5, C-terminal domain NOVO_07245 PF01195 Peptidyl-tRNA hydrolase NOVO_07250 PF00163 Ribosomal protein S4/S9 N-terminal domain NOVO_07250 PF01479 S4 domain NOVO_07255 PF00009 Elongation factor Tu GTP binding domain NOVO_07255 PF00679 Elongation factor G C-terminus NOVO_07270 PF02779 Transketolase, pyrimidine binding domain NOVO_07270 PF02780 Transketolase, C-terminal domain NOVO_07270 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NOVO_07275 PF05101 NOVO_07275 NOVO_07280 PF03135 NOVO_07280 NOVO_07285 PF04610 NOVO_07285 NOVO_07290 PF04610 NOVO_07290 NOVO_07295 PF04610 NOVO_07295 NOVO_07305 PF04610 NOVO_07305 NOVO_07310 PF04610 NOVO_07310 NOVO_07315 PF12705 PD-(D/E)XK nuclease superfamily NOVO_07325 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains NOVO_07330 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains NOVO_07345 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NOVO_07350 PF04028 NOVO_07350 NOVO_07355 PF01510 N-acetylmuramoyl-L-alanine amidase NOVO_07360 PF01710 Transposase NOVO_07365 PF13358 DDE superfamily endonuclease NOVO_07370 PF00515 Tetratricopeptide repeat NOVO_07370 PF13181 Tetratricopeptide repeat NOVO_07370 PF13414 TPR repeat NOVO_07370 PF13432 Tetratricopeptide repeat NOVO_07385 PF00154 recA bacterial DNA recombination protein NOVO_07390 PF00005 ABC transporter NOVO_07395 PF00436 Single-strand binding protein family NOVO_07400 PF03883 NOVO_07400 NOVO_07425 PF00072 Response regulator receiver domain NOVO_07425 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07430 PF04480 Protein of unknown function (DUF559) NOVO_07435 PF00669 Bacterial flagellin N-terminal helical region NOVO_07435 PF00700 Bacterial flagellin C-terminal helical region NOVO_07450 PF05977 Transmembrane secretion effector NOVO_07455 PF12796 Ankyrin repeats (3 copies) NOVO_07460 PF00924 Mechanosensitive ion channel NOVO_07470 PF00106 short chain dehydrogenase NOVO_07475 PF00665 Integrase core domain NOVO_07480 PF00072 Response regulator receiver domain NOVO_07480 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07480 PF02743 Cache domain NOVO_07485 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain NOVO_07485 PF00364 Biotin-requiring enzyme NOVO_07485 PF02785 Biotin carboxylase C-terminal domain NOVO_07485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NOVO_07490 PF01039 Carboxyl transferase domain NOVO_07495 PF03009 Glycerophosphoryl diester phosphodiesterase family NOVO_07500 PF00586 AIR synthase related protein, N-terminal domain NOVO_07500 PF02769 AIR synthase related protein, C-terminal domain NOVO_07505 PF13443 Cro/C1-type HTH DNA-binding domain NOVO_07520 PF00665 Integrase core domain NOVO_07530 PF01710 Transposase NOVO_07535 PF13358 DDE superfamily endonuclease NOVO_07540 PF01183 Glycosyl hydrolases family 25 NOVO_07550 PF00665 Integrase core domain NOVO_07555 PF00563 EAL domain NOVO_07565 PF00749 tRNA synthetases class I (E and Q), catalytic domain NOVO_07570 PF13561 Enoyl-(Acyl carrier protein) reductase NOVO_07575 PF01311 NOVO_07575 NOVO_07580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NOVO_07580 PF06827 Zinc finger found in FPG and IleRS NOVO_07580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NOVO_07590 PF13847 Methyltransferase domain NOVO_07600 PF02371 NOVO_07600 NOVO_07610 PF00023 Ankyrin repeat NOVO_07610 PF12796 Ankyrin repeats (3 copies) NOVO_07615 PF12796 Ankyrin repeats (3 copies) NOVO_07620 PF00023 Ankyrin repeat NOVO_07620 PF12796 Ankyrin repeats (3 copies) NOVO_07625 PF02622 Uncharacterized ACR, COG1678 NOVO_07630 PF11412 Disulphide bond corrector protein DsbC NOVO_07630 PF13899 Thioredoxin-like NOVO_07635 PF00448 SRP54-type protein, GTPase domain NOVO_07635 PF02881 SRP54-type protein, helical bundle domain NOVO_07635 PF02978 Signal peptide binding domain NOVO_07650 PF13091 PLD-like domain NOVO_07670 PF01258 Prokaryotic dksA/traR C4-type zinc finger NOVO_07675 PF00472 RF-1 domain NOVO_07675 PF03462 PCRF domain NOVO_07680 PF12796 Ankyrin repeats (3 copies) NOVO_07685 PF00390 Malic enzyme, N-terminal domain NOVO_07685 PF03949 Malic enzyme, NAD binding domain NOVO_07695 PF00750 tRNA synthetases class I (R) NOVO_07695 PF03485 Arginyl tRNA synthetase N terminal domain NOVO_07695 PF05746 DALR anticodon binding domain NOVO_07700 PF00004 ATPase family associated with various cellular activities (AAA) NOVO_07700 PF16193 NOVO_07700 NOVO_07705 PF01710 Transposase NOVO_07710 PF13358 DDE superfamily endonuclease NOVO_07730 PF13358 DDE superfamily endonuclease NOVO_07735 PF01710 Transposase NOVO_07745 PF00072 Response regulator receiver domain NOVO_07750 PF00072 Response regulator receiver domain NOVO_07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07755 PF13489 Methyltransferase domain NOVO_07760 PF00072 Response regulator receiver domain NOVO_07760 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07770 PF03301 Tryptophan 2,3-dioxygenase NOVO_07780 PF00072 Response regulator receiver domain NOVO_07780 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07790 PF13847 Methyltransferase domain NOVO_07795 PF00072 Response regulator receiver domain NOVO_07795 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07805 PF01610 NOVO_07805 NOVO_07815 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07815 PF00672 HAMP domain NOVO_07815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07865 PF00072 Response regulator receiver domain NOVO_07865 PF00512 His Kinase A (phospho-acceptor) domain NOVO_07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_07870 PF00144 Beta-lactamase NOVO_07880 PF12796 Ankyrin repeats (3 copies) NOVO_07885 PF12796 Ankyrin repeats (3 copies) NOVO_07895 PF13358 DDE superfamily endonuclease NOVO_07900 PF01710 Transposase NOVO_07910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NOVO_07910 PF05697 Bacterial trigger factor protein (TF) NOVO_07910 PF05698 Bacterial trigger factor protein (TF) C-terminus NOVO_07920 PF01743 Poly A polymerase head domain NOVO_07920 PF12627 Probable RNA and SrmB- binding site of polymerase A NOVO_07925 PF00990 GGDEF domain NOVO_07940 PF02321 Outer membrane efflux protein NOVO_07945 PF10691 NOVO_07945 NOVO_07950 PF12796 Ankyrin repeats (3 copies) NOVO_07955 PF01746 tRNA (Guanine-1)-methyltransferase NOVO_07960 PF00012 Hsp70 protein NOVO_07965 PF00226 DnaJ domain NOVO_07965 PF00684 DnaJ central domain NOVO_07965 PF01556 DnaJ C terminal domain NOVO_07975 PF00156 Phosphoribosyl transferase domain NOVO_07980 PF10875 NOVO_07980 NOVO_07990 PF01687 Riboflavin kinase NOVO_07995 PF00885 6,7-dimethyl-8-ribityllumazine synthase NOVO_08000 PF00925 GTP cyclohydrolase II NOVO_08000 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NOVO_08005 PF00677 Lumazine binding domain NOVO_08010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NOVO_08010 PF01872 RibD C-terminal domain NOVO_08015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NOVO_08020 PF00107 Zinc-binding dehydrogenase NOVO_08020 PF08240 Alcohol dehydrogenase GroES-like domain NOVO_08030 PF03100 CcmE NOVO_08035 PF01040 UbiA prenyltransferase family NOVO_08040 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NOVO_08050 PF00313 'Cold-shock' DNA-binding domain NOVO_08060 PF02684 NOVO_08060 NOVO_08065 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NOVO_08070 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NOVO_08075 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NOVO_08080 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NOVO_08085 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin NOVO_08090 PF11738 Protein of unknown function (DUF3298) NOVO_08090 PF13739 Domain of unknown function (DUF4163) NOVO_08095 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NOVO_08095 PF10531 SLBB domain NOVO_08095 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NOVO_08100 PF00384 Molybdopterin oxidoreductase NOVO_08100 PF09326 NOVO_08100 NOVO_08100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NOVO_08100 PF13510 2Fe-2S iron-sulfur cluster binding domain NOVO_08105 PF00146 NADH dehydrogenase NOVO_08110 PF12838 4Fe-4S dicluster domain NOVO_08115 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NOVO_08120 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NOVO_08125 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains NOVO_08125 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NOVO_08125 PF01010 NOVO_08125 NOVO_08130 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains NOVO_08135 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains NOVO_08140 PF16917 NOVO_08140 NOVO_08145 PF03309 Type III pantothenate kinase NOVO_08150 PF07521 RNA-metabolising metallo-beta-lactamase NOVO_08150 PF12706 Beta-lactamase superfamily domain NOVO_08155 PF00390 Malic enzyme, N-terminal domain NOVO_08155 PF01515 Phosphate acetyl/butaryl transferase NOVO_08155 PF03949 Malic enzyme, NAD binding domain NOVO_08160 PF01649 Ribosomal protein S20 NOVO_08165 PF03937 Flavinator of succinate dehydrogenase NOVO_08170 PF02699 Preprotein translocase subunit NOVO_08190 PF01710 Transposase NOVO_08195 PF00118 TCP-1/cpn60 chaperonin family NOVO_08200 PF00166 Chaperonin 10 Kd subunit NOVO_08210 PF02623 FliW protein NOVO_08215 PF00669 Bacterial flagellin N-terminal helical region NOVO_08220 PF00460 Flagella basal body rod protein NOVO_08230 PF10135 NOVO_08230 NOVO_08235 PF02119 NOVO_08235 NOVO_08240 PF04093 NOVO_08240 NOVO_08245 PF00905 Penicillin binding protein transpeptidase domain NOVO_08245 PF03717 Penicillin-binding Protein dimerisation domain NOVO_08250 PF01565 FAD binding domain NOVO_08250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NOVO_08265 PF00581 Rhodanese-like domain NOVO_08270 PF00308 Bacterial dnaA protein NOVO_08270 PF08299 Bacterial dnaA protein helix-turn-helix NOVO_08270 PF11638 DnaA N-terminal domain NOVO_08275 PF00712 DNA polymerase III beta subunit, N-terminal domain NOVO_08275 PF02767 DNA polymerase III beta subunit, central domain NOVO_08275 PF02768 DNA polymerase III beta subunit, C-terminal domain NOVO_08285 PF02390 Putative methyltransferase NOVO_08295 PF01464 Transglycosylase SLT domain NOVO_08300 PF00171 Aldehyde dehydrogenase family NOVO_08300 PF01619 Proline dehydrogenase NOVO_08300 PF14850 DNA-binding domain of Proline dehydrogenase NOVO_08305 PF01926 50S ribosome-binding GTPase NOVO_08305 PF13167 NOVO_08305 NOVO_08305 PF16360 NOVO_08305 NOVO_08310 PF13358 DDE superfamily endonuclease NOVO_08315 PF01710 Transposase NOVO_08325 PF00023 Ankyrin repeat NOVO_08325 PF12796 Ankyrin repeats (3 copies) NOVO_08330 PF01710 Transposase NOVO_08335 PF13358 DDE superfamily endonuclease NOVO_08340 PF01043 SecA preprotein cross-linking domain NOVO_08340 PF02810 SEC-C motif NOVO_08340 PF07516 SecA Wing and Scaffold domain NOVO_08340 PF07517 SecA DEAD-like domain NOVO_08375 PF13358 DDE superfamily endonuclease NOVO_08380 PF01710 Transposase NOVO_08385 PF07517 SecA DEAD-like domain NOVO_08420 PF09407 Protein of unknown function (DUF2005) NOVO_08425 PF08843 Nucleotidyl transferase of unknown function (DUF1814) NOVO_08435 PF12728 Helix-turn-helix domain NOVO_08450 PF06250 NOVO_08450 NOVO_08480 PF02348 Cytidylyltransferase NOVO_08485 PF01063 Aminotransferase class IV NOVO_08490 PF00701 Dihydrodipicolinate synthetase family NOVO_08495 PF01668 SmpB protein NOVO_08500 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NOVO_08515 PF12796 Ankyrin repeats (3 copies) NOVO_08525 PF08448 PAS fold NOVO_08535 PF04402 Protein of unknown function (DUF541) NOVO_08540 PF01850 PIN domain NOVO_08545 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NOVO_08550 PF07681 NOVO_08550 NOVO_08555 PF06727 NOVO_08555 NOVO_08565 PF04055 Radical SAM superfamily NOVO_08575 PF13539 D-alanyl-D-alanine carboxypeptidase NOVO_08580 PF01118 Semialdehyde dehydrogenase, NAD binding domain NOVO_08580 PF02774 Semialdehyde dehydrogenase, dimerisation domain NOVO_08585 PF00805 Pentapeptide repeats (8 copies) NOVO_08585 PF13599 Pentapeptide repeats (9 copies) NOVO_08590 PF00665 Integrase core domain NOVO_08600 PF03070 TENA/THI-4/PQQC family NOVO_08605 PF00210 Ferritin-like domain NOVO_08610 PF09140 ATPase MipZ NOVO_08620 PF03060 Nitronate monooxygenase NOVO_08625 PF13481 AAA domain NOVO_08625 PF13541 Subunit ChlI of Mg-chelatase NOVO_08630 PF02590 Predicted SPOUT methyltransferase NOVO_08655 PF03795 YCII-related domain NOVO_08660 PF00072 Response regulator receiver domain NOVO_08660 PF00512 His Kinase A (phospho-acceptor) domain NOVO_08660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NOVO_08665 PF00311 Phosphoenolpyruvate carboxylase NOVO_08670 PF01312 FlhB HrpN YscU SpaS Family NOVO_08680 PF00533 BRCA1 C Terminus (BRCT) domain NOVO_08680 PF01653 NAD-dependent DNA ligase adenylation domain NOVO_08680 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NOVO_08680 PF03120 NAD-dependent DNA ligase OB-fold domain NOVO_08680 PF12826 Helix-hairpin-helix motif NOVO_08685 PF00140 Sigma-70 factor, region 1 NOVO_08685 PF04542 Sigma-70 region 2 NOVO_08685 PF04545 Sigma-70, region 4 NOVO_08690 PF03129 Anticodon binding domain NOVO_08690 PF13393 Histidyl-tRNA synthetase NOVO_08710 PF13358 DDE superfamily endonuclease NOVO_08715 PF01710 Transposase NOVO_08720 PF00353 Hemolysin-type calcium-binding repeat (2 copies) NOVO_08725 PF01710 Transposase NOVO_08730 PF13358 DDE superfamily endonuclease NOVO_08735 PF12796 Ankyrin repeats (3 copies) NOVO_08735 PF13637 Ankyrin repeats (many copies) NOVO_08740 PF01906 Putative heavy-metal-binding NOVO_08745 PF13231 NOVO_08745 NOVO_08750 PF00270 DEAD/DEAH box helicase NOVO_08755 PF01609 Transposase DDE domain NOVO_08755 PF13340 NOVO_08755 NOVO_08760 PF00665 Integrase core domain NOVO_08770 PF01710 Transposase NOVO_08775 PF13358 DDE superfamily endonuclease NOVO_08780 PF01183 Glycosyl hydrolases family 25 NOVO_08790 PF00665 Integrase core domain NOVO_08795 PF04860 Phage portal protein NOVO_08805 PF00005 ABC transporter NOVO_08805 PF00664 ABC transporter transmembrane region NOVO_08810 PF13516 Leucine Rich repeat NOVO_08815 PF13516 Leucine Rich repeat NOVO_08820 PF13358 DDE superfamily endonuclease NOVO_08825 PF01710 Transposase NOVO_08840 PF03741 NOVO_08840 NOVO_08845 PF02355 Protein export membrane protein NOVO_08845 PF07549 SecD/SecF GG Motif NOVO_08850 PF00892 EamA-like transporter family NOVO_08855 PF12796 Ankyrin repeats (3 copies) NOVO_08855 PF13857 Ankyrin repeats (many copies) NOVO_08860 PF12796 Ankyrin repeats (3 copies) NOVO_08860 PF13637 Ankyrin repeats (many copies) NOVO_08865 PF12796 Ankyrin repeats (3 copies) NOVO_08870 PF00691 OmpA family NOVO_08875 PF00691 OmpA family NOVO_08880 PF01351 Ribonuclease HII NOVO_08890 PF01513 ATP-NAD kinase NOVO_08895 PF01297 Periplasmic solute binding protein family NOVO_08900 PF01272 Transcription elongation factor, GreA/GreB, C-term NOVO_08900 PF03449 Transcription elongation factor, N-terminal NOVO_08905 PF02142 MGS-like domain NOVO_08905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NOVO_08905 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NOVO_08910 PF00117 Glutamine amidotransferase class-I NOVO_08910 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NOVO_08920 PF00834 Ribulose-phosphate 3 epimerase family NOVO_08925 PF11020 NOVO_08925 NOVO_08935 PF06347 Bacterial SH3 domain NOVO_08940 PF00999 Sodium/hydrogen exchanger family NOVO_08940 PF02254 TrkA-N domain NOVO_08945 PF13561 Enoyl-(Acyl carrier protein) reductase NOVO_08950 PF11775 NOVO_08950 NOVO_08955 PF01710 Transposase NOVO_08960 PF13358 DDE superfamily endonuclease NOVO_08965 PF06213 NOVO_08965 NOVO_08985 PF13905 Thioredoxin-like NOVO_09000 PF00813 NOVO_09000 NOVO_09010 PF04402 Protein of unknown function (DUF541) NOVO_09015 PF00005 ABC transporter NOVO_09020 PF13358 DDE superfamily endonuclease NOVO_09025 PF01710 Transposase NOVO_09040 PF13332 NOVO_09040 NOVO_09045 PF14567 SMI1-KNR4 cell-wall NOVO_09050 PF13332 NOVO_09050 NOVO_09050 PF14411 NOVO_09050 NOVO_09055 PF01381 Helix-turn-helix NOVO_09060 PF05973 NOVO_09060 NOVO_09080 PF01476 LysM domain NOVO_09080 PF09000 Cytotoxic NOVO_09090 PF13332 NOVO_09090 NOVO_09095 PF04796 NOVO_09095 NOVO_09095 PF11638 DnaA N-terminal domain NOVO_09105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NOVO_09110 PF00239 Resolvase, N terminal domain NOVO_09110 PF02796 Helix-turn-helix domain of resolvase NOVO_09150 PF00239 Resolvase, N terminal domain NOVO_09150 PF02796 Helix-turn-helix domain of resolvase NOVO_09155 PF04754 NOVO_09155 NOVO_09170 PF08751 TrwC relaxase NOVO_09170 PF13604 AAA domain NOVO_09175 PF06250 NOVO_09175 NOVO_09180 PF10412 Type IV secretion-system coupling protein DNA-binding domain NOVO_09190 PF07916 NOVO_09190 NOVO_09195 PF06122 NOVO_09195 NOVO_09200 PF13728 F plasmid transfer operon protein NOVO_09205 PF06986 NOVO_09205 NOVO_09215 PF09673 NOVO_09215 NOVO_09220 PF06834 NOVO_09220 NOVO_09235 PF11130 NOVO_09235 NOVO_09235 PF12846 AAA-like domain NOVO_09245 PF03743 Bacterial conjugation TrbI-like protein NOVO_09250 PF06586 NOVO_09250 NOVO_09255 PF05309 NOVO_09255 NOVO_09260 PF07178 NOVO_09260 NOVO_09265 PF04956 NOVO_09265 NOVO_09270 PF11638 DnaA N-terminal domain NOVO_09290 PF13443 Cro/C1-type HTH DNA-binding domain NOVO_09300 PF13181 Tetratricopeptide repeat NOVO_09310 PF03083 Sugar efflux transporter for intercellular exchange NOVO_09320 PF13181 Tetratricopeptide repeat NOVO_09320 PF13414 TPR repeat NOVO_09330 PF00515 Tetratricopeptide repeat NOVO_09330 PF13181 Tetratricopeptide repeat NOVO_09330 PF13414 TPR repeat NOVO_09330 PF13432 Tetratricopeptide repeat NOVO_09335 PF01381 Helix-turn-helix NOVO_09340 PF13637 Ankyrin repeats (many copies) NOVO_09350 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system NOVO_09355 PF00589 Phage integrase family NOVO_09365 PF01850 PIN domain NOVO_09370 PF04014 Antidote-toxin recognition MazE NOVO_09375 PF01850 PIN domain NOVO_09380 PF04014 Antidote-toxin recognition MazE NOVO_09385 PF01850 PIN domain NOVO_09390 PF03350 NOVO_09390 NOVO_09395 PF01051 Initiator Replication protein NOVO_09395 PF11638 DnaA N-terminal domain NOVO_09400 PF16363 NOVO_09400 NOVO_09405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NOVO_09410 PF01757 NOVO_09410 NOVO_09415 PF05711 Macrocin-O-methyltransferase (TylF) NOVO_09420 PF02655 ATP-grasp domain NOVO_09425 PF08282 haloacid dehalogenase-like hydrolase NOVO_09435 PF01061 NOVO_09435 NOVO_09440 PF00005 ABC transporter NOVO_09450 PF05050 Methyltransferase FkbM domain NOVO_09455 PF02195 ParB-like nuclease domain NOVO_09460 PF13614 AAA domain