locus-tag class description E3384_00005 IPR024633 DnaA N-terminal domain E3384_00005 IPR003593 AAA+ ATPase domain E3384_00005 IPR001957 Chromosomal replication control, initiator DnaA E3384_00005 IPR020591 Chromosomal replication control, initiator DnaA-like E3384_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site E3384_00005 IPR010921 Trp repressor/replication initiator E3384_00005 IPR013317 Chromosomal replication initiator protein DnaA E3384_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal E3384_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_00005 IPR038454 DnaA, N-terminal domain superfamily E3384_00010 IPR022637 DNA polymerase III, beta sliding clamp, central E3384_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal E3384_00010 IPR001001 DNA polymerase III, beta sliding clamp E3384_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal E3384_00015 IPR001238 DNA-binding, RecF E3384_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_00015 IPR003395 RecF/RecN/SMC, N-terminal E3384_00015 IPR042174 DNA-binding RecF, domain 2 E3384_00015 IPR018078 DNA-binding, RecF, conserved site E3384_00020 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain E3384_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_00020 IPR003594 Histidine kinase/HSP90-like ATPase E3384_00020 IPR041423 DNA gyrase subunit B insert domain E3384_00020 IPR001241 DNA topoisomerase, type IIA E3384_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily E3384_00020 IPR011557 DNA gyrase, subunit B E3384_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal E3384_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 E3384_00020 IPR018522 DNA topoisomerase, type IIA, conserved site E3384_00020 IPR006171 TOPRIM domain E3384_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_00020 IPR002288 DNA gyrase B subunit, C-terminal E3384_00025 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_00025 IPR000847 Transcription regulator HTH, LysR E3384_00025 IPR005119 LysR, substrate-binding E3384_00025 IPR036390 Winged helix DNA-binding domain superfamily E3384_00030 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site E3384_00030 IPR034618 D-galactarolactone cycloisomerase E3384_00030 IPR029065 Enolase C-terminal domain-like E3384_00030 IPR029017 Enolase-like, N-terminal E3384_00030 IPR036849 Enolase-like, C-terminal domain superfamily E3384_00030 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal E3384_00030 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain E3384_00035 IPR000849 Sugar phosphate transporter E3384_00035 IPR036259 MFS transporter superfamily E3384_00035 IPR020846 Major facilitator superfamily domain E3384_00035 IPR011701 Major facilitator superfamily E3384_00040 IPR006379 HAD-superfamily hydrolase, subfamily IIB E3384_00040 IPR036412 HAD-like superfamily E3384_00040 IPR000150 Cof family E3384_00040 IPR023214 HAD superfamily E3384_00045 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_00045 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_00045 IPR000524 Transcription regulator HTH, GntR E3384_00045 IPR036390 Winged helix DNA-binding domain superfamily E3384_00045 IPR011711 GntR, C-terminal E3384_00050 IPR042258 2-keto-3-deoxy-galactonokinase, N-terminal E3384_00050 IPR042257 2-keto-3-deoxy-galactonokinase, C-terminal domain E3384_00050 IPR007729 2-keto-3-deoxy-galactonokinase E3384_00055 IPR000887 KDPG/KHG aldolase E3384_00055 IPR013785 Aldolase-type TIM barrel E3384_00060 IPR029017 Enolase-like, N-terminal E3384_00060 IPR029065 Enolase C-terminal domain-like E3384_00060 IPR034593 Mandelate racemase-like E3384_00060 IPR036849 Enolase-like, C-terminal domain superfamily E3384_00060 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain E3384_00060 IPR023592 D-galactonate dehydratase E3384_00060 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site E3384_00060 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal E3384_00065 IPR036259 MFS transporter superfamily E3384_00065 IPR020846 Major facilitator superfamily domain E3384_00065 IPR011701 Major facilitator superfamily E3384_00070 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_00070 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_00070 IPR003594 Histidine kinase/HSP90-like ATPase E3384_00070 IPR005467 Histidine kinase domain E3384_00070 IPR011006 CheY-like superfamily E3384_00070 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_00070 IPR036641 HPT domain superfamily E3384_00070 IPR037952 Sensor histidine kinase TorS, sensor domain E3384_00070 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_00070 IPR038188 TorS, sensor domain superfamily E3384_00070 IPR001789 Signal transduction response regulator, receiver domain E3384_00070 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain E3384_00070 IPR003660 HAMP domain E3384_00075 IPR001761 Periplasmic binding protein/LacI sugar binding domain E3384_00075 IPR028082 Periplasmic binding protein-like I E3384_00075 IPR014301 TMAO reductase system, periplasmic protein TorT E3384_00080 IPR011006 CheY-like superfamily E3384_00080 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_00080 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_00080 IPR039420 Transcriptional regulatory protein WalR-like E3384_00080 IPR001789 Signal transduction response regulator, receiver domain E3384_00085 IPR005126 NapC/NirT cytochrome c, N-terminal E3384_00085 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK E3384_00085 IPR011031 Multihaem cytochrome E3384_00085 IPR036280 Multiheme cytochrome superfamily E3384_00085 IPR038266 NapC/NirT cytochrome c superfamily E3384_00090 IPR006657 Molybdopterin dinucleotide-binding domain E3384_00090 IPR011887 Trimethylamine-N-oxide reductase TorA E3384_00090 IPR041460 Molybdopterin oxidoreductase, N-terminal E3384_00090 IPR006656 Molybdopterin oxidoreductase E3384_00090 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_00090 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain E3384_00090 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_00090 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_00090 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase E3384_00095 IPR036386 HscB, C-terminal domain superfamily E3384_00095 IPR036411 TorD-like superfamily E3384_00095 IPR023069 Chaperone TorD E3384_00095 IPR020945 DMSO/Nitrate reductase chaperone E3384_00100 IPR009056 Cytochrome c-like domain E3384_00100 IPR004852 Di-haem cytochrome c peroxidase E3384_00100 IPR036909 Cytochrome c-like domain superfamily E3384_00100 IPR025992 Haem-binding domain E3384_00105 IPR003439 ABC transporter-like E3384_00105 IPR005895 ABC transporter, haem export, CcmA E3384_00105 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_00105 IPR003593 AAA+ ATPase domain E3384_00105 IPR017871 ABC transporter, conserved site E3384_00110 IPR003544 Cytochrome c-type biogenesis protein CcmB E3384_00110 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria E3384_00115 IPR002541 Cytochrome c assembly protein E3384_00115 IPR003557 Cytochrome c-type biogenesis protein CcmC E3384_00120 IPR007078 Haem exporter protein D (CcmD) E3384_00125 IPR004329 CcmE/CycJ protein E3384_00125 IPR036127 CcmE-like superfamily E3384_00130 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal E3384_00130 IPR002541 Cytochrome c assembly protein E3384_00130 IPR003568 Cytochrome c-type biogenesis protein CcmF E3384_00130 IPR003567 Cytochrome c-type biogenesis protein E3384_00135 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE E3384_00135 IPR013740 Redoxin E3384_00135 IPR036249 Thioredoxin-like superfamily E3384_00135 IPR017937 Thioredoxin, conserved site E3384_00135 IPR013766 Thioredoxin domain E3384_00140 IPR005616 CcmH/CycL/Ccl2/NrfF family E3384_00140 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily E3384_00140 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_00140 IPR013026 Tetratricopeptide repeat-containing domain E3384_00140 IPR019734 Tetratricopeptide repeat E3384_00145 IPR022223 Protein of unknown function DUF3748 E3384_00145 IPR011659 WD40-like Beta Propeller E3384_00145 IPR011042 Six-bladed beta-propeller, TolB-like E3384_00150 IPR010780 Protein of unknown function DUF1375 E3384_00155 IPR023728 Small heat shock protein IbpA E3384_00155 IPR008978 HSP20-like chaperone E3384_00155 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain E3384_00155 IPR002068 Alpha crystallin/Hsp20 domain E3384_00160 IPR022848 Small heat shock protein IbpB E3384_00160 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain E3384_00160 IPR008978 HSP20-like chaperone E3384_00160 IPR002068 Alpha crystallin/Hsp20 domain E3384_00165 IPR006037 Regulator of K+ conductance, C-terminal E3384_00165 IPR006512 YidE/YbjL duplication E3384_00165 IPR023018 Transport protein YidE, putative E3384_00165 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily E3384_00175 IPR003807 Domain of unknown function DUF202 E3384_00180 IPR003807 Domain of unknown function DUF202 E3384_00185 IPR013785 Aldolase-type TIM barrel E3384_00190 IPR011780 D-serine ammonia-lyase E3384_00190 IPR001926 Pyridoxal-phosphate dependent enzyme E3384_00190 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site E3384_00190 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme E3384_00195 IPR003474 Gluconate transporter E3384_00200 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_00200 IPR011781 D-serine deaminase transcriptional activator E3384_00200 IPR000847 Transcription regulator HTH, LysR E3384_00200 IPR036390 Winged helix DNA-binding domain superfamily E3384_00200 IPR005119 LysR, substrate-binding E3384_00210 IPR020846 Major facilitator superfamily domain E3384_00210 IPR004734 Multidrug resistance protein E3384_00210 IPR036259 MFS transporter superfamily E3384_00210 IPR011701 Major facilitator superfamily E3384_00220 IPR025211 Toxin TisB, type I toxin-antitoxin system E3384_00230 IPR012566 IlvB leader peptide E3384_00235 IPR000399 TPP-binding enzyme, conserved site E3384_00235 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E3384_00235 IPR012000 Thiamine pyrophosphate enzyme, central domain E3384_00235 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain E3384_00235 IPR012846 Acetolactate synthase, large subunit, biosynthetic E3384_00235 IPR039368 Acetolactate synthase large subunit, TPP binding domain E3384_00235 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_00235 IPR029061 Thiamin diphosphate-binding fold E3384_00240 IPR039557 AHAS, ACT domain E3384_00240 IPR002912 ACT domain E3384_00240 IPR004789 Acetolactate synthase, small subunit E3384_00245 IPR037171 NagB/RpiA transferase-like E3384_00245 IPR014036 DeoR C-terminal sensor domain E3384_00245 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_00245 IPR001034 DeoR-type HTH domain E3384_00250 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_00250 IPR029056 Ribokinase-like E3384_00250 IPR002139 Ribokinase/fructokinase E3384_00250 IPR011611 Carbohydrate kinase PfkB E3384_00250 IPR011877 Ribokinase E3384_00255 IPR036259 MFS transporter superfamily E3384_00255 IPR020846 Major facilitator superfamily domain E3384_00255 IPR011701 Major facilitator superfamily E3384_00255 IPR005275 L-fucose permease FucP E3384_00265 IPR011006 CheY-like superfamily E3384_00265 IPR016032 Signal transduction response regulator, C-terminal effector E3384_00265 IPR000792 Transcription regulator LuxR, C-terminal E3384_00265 IPR001789 Signal transduction response regulator, receiver domain E3384_00270 IPR003594 Histidine kinase/HSP90-like ATPase E3384_00270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_00270 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain E3384_00270 IPR005467 Histidine kinase domain E3384_00270 IPR007895 MASE1 E3384_00275 IPR000849 Sugar phosphate transporter E3384_00275 IPR021159 Glycerate/sugar phosphate transporter, conserved site E3384_00275 IPR036259 MFS transporter superfamily E3384_00275 IPR020846 Major facilitator superfamily domain E3384_00275 IPR011701 Major facilitator superfamily E3384_00280 IPR021159 Glycerate/sugar phosphate transporter, conserved site E3384_00280 IPR000849 Sugar phosphate transporter E3384_00280 IPR036259 MFS transporter superfamily E3384_00280 IPR020846 Major facilitator superfamily domain E3384_00280 IPR011701 Major facilitator superfamily E3384_00285 IPR009587 Protein of unknown function DUF1198 E3384_00295 IPR007737 Mga helix-turn-helix domain E3384_00295 IPR013196 Helix-turn-helix, type 11 E3384_00295 IPR011608 PRD domain E3384_00295 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_00295 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_00295 IPR036634 PRD domain superfamily E3384_00295 IPR016152 Phosphotransferase/anion transporter E3384_00295 IPR002178 PTS EIIA type-2 domain E3384_00295 IPR036095 PTS system IIB component-like superfamily E3384_00300 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_00300 IPR036095 PTS system IIB component-like superfamily E3384_00300 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_00305 IPR013853 Galactitol permease IIC component E3384_00305 IPR013014 Phosphotransferase system, EIIC component, type 2 E3384_00305 IPR004703 Phosphotransferase system, sugar-specific permease component E3384_00315 IPR000771 Fructose-bisphosphate aldolase, class-II E3384_00315 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 E3384_00315 IPR013785 Aldolase-type TIM barrel E3384_00335 IPR020846 Major facilitator superfamily domain E3384_00335 IPR023680 Purine ribonucleoside efflux pump, NepI E3384_00335 IPR036259 MFS transporter superfamily E3384_00335 IPR011701 Major facilitator superfamily E3384_00340 IPR018120 Glycoside hydrolase family 1, active site E3384_00340 IPR001360 Glycoside hydrolase family 1 E3384_00340 IPR017853 Glycoside hydrolase superfamily E3384_00350 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_00350 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily E3384_00350 IPR036634 PRD domain superfamily E3384_00350 IPR011608 PRD domain E3384_00350 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_00350 IPR003593 AAA+ ATPase domain E3384_00350 IPR004701 Phosphotransferase system, mannose-type IIA component E3384_00360 IPR004701 Phosphotransferase system, mannose-type IIA component E3384_00360 IPR013789 Phosphotransferase system, mannose family IIA component E3384_00360 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily E3384_00360 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup E3384_00360 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily E3384_00360 IPR004720 Phosphotransferase system, sorbose subfamily IIB component E3384_00360 IPR033887 PTS system mannose/sorbose specific IIA subunit E3384_00365 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit E3384_00370 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component E3384_00375 IPR018319 L-seryl-tRNA selenium transferase-like E3384_00375 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_00375 IPR015424 Pyridoxal phosphate-dependent transferase E3384_00375 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like E3384_00380 IPR013785 Aldolase-type TIM barrel E3384_00380 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase E3384_00385 IPR010106 Recombination-promoting nuclease RpnA E3384_00385 IPR006842 Transposase (putative), YhgA-like E3384_00390 IPR000620 EamA domain E3384_00395 IPR003416 MgtC/SapB/SrpB/YhiD family E3384_00400 IPR008250 P-type ATPase, A domain superfamily E3384_00400 IPR006415 P-type ATPase, subfamily IIIB E3384_00400 IPR023214 HAD superfamily E3384_00400 IPR036412 HAD-like superfamily E3384_00400 IPR006068 Cation-transporting P-type ATPase, C-terminal E3384_00400 IPR001757 P-type ATPase E3384_00400 IPR023299 P-type ATPase, cytoplasmic domain N E3384_00400 IPR023298 P-type ATPase, transmembrane domain superfamily E3384_00400 IPR018303 P-type ATPase, phosphorylation site E3384_00400 IPR004014 Cation-transporting P-type ATPase, N-terminal E3384_00415 IPR000868 Isochorismatase-like E3384_00415 IPR036380 Isochorismatase-like superfamily E3384_00425 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_00425 IPR016032 Signal transduction response regulator, C-terminal effector E3384_00425 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_00435 IPR011050 Pectin lyase fold/virulence factor E3384_00435 IPR012332 P22 tailspike-like, C-terminal domain superfamily E3384_00435 IPR006315 Outer membrane autotransporter barrel E3384_00435 IPR036709 Autotransporter beta-domain superfamily E3384_00435 IPR005546 Autotransporter beta-domain E3384_00440 IPR016032 Signal transduction response regulator, C-terminal effector E3384_00440 IPR000792 Transcription regulator LuxR, C-terminal E3384_00460 IPR018043 Sodium:galactoside symporter, conserved site E3384_00460 IPR001927 Sodium:galactoside symporter E3384_00460 IPR036259 MFS transporter superfamily E3384_00460 IPR039672 Lactose permease-like E3384_00465 IPR011013 Galactose mutarotase-like domain superfamily E3384_00465 IPR025887 Glycoside hydrolase family 31, N-terminal domain E3384_00465 IPR017853 Glycoside hydrolase superfamily E3384_00465 IPR000322 Glycoside hydrolase family 31 E3384_00465 IPR013780 Glycosyl hydrolase, all-beta E3384_00470 IPR007844 AsmA E3384_00475 IPR006042 Xanthine/uracil permease E3384_00475 IPR006043 Xanthine/uracil/vitamin C permease E3384_00480 IPR004445 Sodium/glutamate symport carrier protein GltS E3384_00485 IPR011545 DEAD/DEAH box helicase domain E3384_00485 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_00485 IPR001650 Helicase, C-terminal E3384_00485 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_00485 IPR033454 RecG, wedge domain E3384_00485 IPR012340 Nucleic acid-binding, OB-fold E3384_00485 IPR004609 ATP-dependent DNA helicase RecG E3384_00490 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase E3384_00490 IPR001537 tRNA/rRNA methyltransferase, SpoU type E3384_00490 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal E3384_00490 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E3384_00490 IPR029028 Alpha/beta knot methyltransferases E3384_00495 IPR012676 TGS-like E3384_00495 IPR004095 TGS E3384_00495 IPR007685 RelA/SpoT E3384_00495 IPR002912 ACT domain E3384_00495 IPR033655 RelA, TGS domain E3384_00495 IPR003607 HD/PDEase domain E3384_00495 IPR004811 RelA/SpoT family E3384_00495 IPR012675 Beta-grasp domain superfamily E3384_00500 IPR006110 RNA polymerase, subunit omega/K/RPB6 E3384_00500 IPR003716 DNA-directed RNA polymerase, omega subunit E3384_00500 IPR012293 RNA polymerase subunit, RPB6/omega E3384_00500 IPR036161 RPB6/omega subunit-like superfamily E3384_00505 IPR017665 Guanylate kinase E3384_00505 IPR020590 Guanylate kinase, conserved site E3384_00505 IPR008145 Guanylate kinase/L-type calcium channel beta subunit E3384_00505 IPR008144 Guanylate kinase-like domain E3384_00505 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_00510 IPR004150 NAD-dependent DNA ligase, OB-fold E3384_00510 IPR012340 Nucleic acid-binding, OB-fold E3384_00510 IPR013840 NAD-dependent DNA ligase, N-terminal E3384_00510 IPR013839 NAD-dependent DNA ligase, adenylation E3384_00510 IPR020923 DNA ligase B E3384_00510 IPR018239 NAD-dependent DNA ligase, active site E3384_00510 IPR010994 RuvA domain 2-like E3384_00510 IPR033136 NAD-dependent DNA ligase, conserved site E3384_00515 IPR005115 Uncharacterised domain UPF0126 E3384_00525 IPR000847 Transcription regulator HTH, LysR E3384_00525 IPR036390 Winged helix DNA-binding domain superfamily E3384_00525 IPR005119 LysR, substrate-binding E3384_00525 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_00530 IPR013551 Domain of unknown function DUF1732 E3384_00530 IPR005229 Conserved hypothetical protein CHP00255 E3384_00530 IPR013527 YicC-like, N-terminal E3384_00535 IPR018336 Ribonuclease PH, conserved site E3384_00535 IPR002381 Ribonuclease PH, bacterial-type E3384_00535 IPR027408 PNPase/RNase PH domain superfamily E3384_00535 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_00535 IPR001247 Exoribonuclease, phosphorolytic domain 1 E3384_00535 IPR036345 Exoribonuclease, PH domain 2 superfamily E3384_00535 IPR015847 Exoribonuclease, phosphorolytic domain 2 E3384_00540 IPR029057 Phosphoribosyltransferase-like E3384_00540 IPR000836 Phosphoribosyltransferase domain E3384_00540 IPR004467 Orotate phosphoribosyl transferase domain E3384_00540 IPR023031 Orotate phosphoribosyltransferase E3384_00545 IPR023769 Nucleoid occlusion factor SlmA E3384_00545 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_00545 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E3384_00545 IPR009057 Homeobox-like domain superfamily E3384_00545 IPR001647 DNA-binding HTH domain, TetR-type E3384_00550 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase E3384_00550 IPR033704 dUTPase, trimeric E3384_00550 IPR036157 dUTPase-like superfamily E3384_00550 IPR029054 dUTPase-like E3384_00555 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC E3384_00555 IPR035929 CoaB-like superfamily E3384_00555 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal E3384_00555 IPR003382 Flavoprotein E3384_00555 IPR036551 Flavin prenyltransferase-like E3384_00560 IPR037518 MPN domain E3384_00560 IPR025657 RadC-like JAB domain E3384_00560 IPR010994 RuvA domain 2-like E3384_00560 IPR001405 Uncharacterised protein family UPF0758 E3384_00560 IPR020891 Uncharacterised protein family UPF0758, conserved site E3384_00560 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily E3384_00565 IPR037147 Ribosomal protein L28/L24 superfamily E3384_00565 IPR001383 Ribosomal protein L28 E3384_00565 IPR026569 Ribosomal protein L28/L24 E3384_00565 IPR034704 L28p-like E3384_00570 IPR011332 Zinc-binding ribosomal protein E3384_00570 IPR018264 Ribosomal protein L33, conserved site E3384_00570 IPR001705 Ribosomal protein L33 E3384_00570 IPR038584 Ribosomal protein L33 superfamily E3384_00575 IPR020629 Formamidopyrimidine-DNA glycosylase E3384_00575 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain E3384_00575 IPR010663 Zinc finger, FPG/IleRS-type E3384_00575 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type E3384_00575 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding E3384_00575 IPR035937 MutM-like, N-terminal E3384_00575 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site E3384_00575 IPR010979 Ribosomal protein S13-like, H2TH E3384_00580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_00580 IPR004821 Cytidyltransferase-like domain E3384_00580 IPR001980 Phosphopantetheine adenylyltransferase E3384_00585 IPR039901 3-deoxy-D-manno-octulosonic acid transferase E3384_00585 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily E3384_00585 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal E3384_00590 IPR011916 Lipopolysaccharide heptosyltransferase III, putative E3384_00590 IPR002201 Glycosyl transferase, family 9 E3384_00595 IPR001296 Glycosyl transferase, family 1 E3384_00595 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain E3384_00600 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP E3384_00600 IPR011009 Protein kinase-like domain superfamily E3384_00615 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain E3384_00615 IPR001296 Glycosyl transferase, family 1 E3384_00620 IPR013645 Glycosyl transferase, family 8, C-terminal E3384_00620 IPR029044 Nucleotide-diphospho-sugar transferases E3384_00620 IPR002495 Glycosyl transferase, family 8 E3384_00625 IPR002495 Glycosyl transferase, family 8 E3384_00625 IPR029044 Nucleotide-diphospho-sugar transferases E3384_00625 IPR013645 Glycosyl transferase, family 8, C-terminal E3384_00630 IPR011009 Protein kinase-like domain superfamily E3384_00630 IPR009330 Lipopolysaccharide core heptose(II) kinase E3384_00635 IPR031026 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ E3384_00640 IPR001296 Glycosyl transferase, family 1 E3384_00645 IPR007016 O-antigen ligase-related E3384_00650 IPR002201 Glycosyl transferase, family 9 E3384_00650 IPR011908 Lipopolysaccharide heptosyltransferase I E3384_00655 IPR002201 Glycosyl transferase, family 9 E3384_00655 IPR011910 ADP-heptose--LPS heptosyltransferase 2 E3384_00660 IPR001509 NAD-dependent epimerase/dehydratase E3384_00660 IPR036291 NAD(P)-binding domain superfamily E3384_00660 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase E3384_00665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_00665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_00665 IPR004839 Aminotransferase, class I/classII E3384_00665 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site E3384_00665 IPR015424 Pyridoxal phosphate-dependent transferase E3384_00665 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase E3384_00670 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E3384_00670 IPR013154 Alcohol dehydrogenase, N-terminal E3384_00670 IPR020843 Polyketide synthase, enoylreductase domain E3384_00670 IPR036291 NAD(P)-binding domain superfamily E3384_00670 IPR004627 L-threonine 3-dehydrogenase E3384_00670 IPR011032 GroES-like superfamily E3384_00670 IPR013149 Alcohol dehydrogenase, C-terminal E3384_00680 IPR001173 Glycosyltransferase 2-like E3384_00680 IPR029044 Nucleotide-diphospho-sugar transferases E3384_00685 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel E3384_00685 IPR006837 Divergent polysaccharide deacetylase E3384_00690 IPR011055 Duplicated hybrid motif E3384_00690 IPR016047 Peptidase M23 E3384_00695 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent E3384_00695 IPR017850 Alkaline-phosphatase-like, core domain superfamily E3384_00695 IPR011258 BPG-independent PGAM, N-terminal E3384_00695 IPR006124 Metalloenzyme E3384_00695 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily E3384_00700 IPR036873 Rhodanese-like domain superfamily E3384_00700 IPR001763 Rhodanese-like domain E3384_00705 IPR011900 Glutaredoxin, GrxC E3384_00705 IPR002109 Glutaredoxin E3384_00705 IPR014025 Glutaredoxin subgroup E3384_00705 IPR036249 Thioredoxin-like superfamily E3384_00705 IPR011767 Glutaredoxin active site E3384_00710 IPR003708 Bacterial protein export chaperone SecB E3384_00710 IPR035958 SecB-like superfamily E3384_00715 IPR036291 NAD(P)-binding domain superfamily E3384_00715 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal E3384_00715 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal E3384_00715 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent E3384_00715 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_00715 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_00720 IPR005881 Serine O-acetyltransferase E3384_00720 IPR042122 Serine acetyltransferase, N-terminal domain superfamily E3384_00720 IPR011004 Trimeric LpxA-like superfamily E3384_00720 IPR010493 Serine acetyltransferase, N-terminal E3384_00720 IPR018357 Hexapeptide transferase, conserved site E3384_00720 IPR001451 Hexapeptide repeat E3384_00725 IPR011701 Major facilitator superfamily E3384_00725 IPR000849 Sugar phosphate transporter E3384_00725 IPR036259 MFS transporter superfamily E3384_00725 IPR020846 Major facilitator superfamily domain E3384_00730 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain E3384_00730 IPR036849 Enolase-like, C-terminal domain superfamily E3384_00730 IPR029017 Enolase-like, N-terminal E3384_00730 IPR029065 Enolase C-terminal domain-like E3384_00730 IPR033978 L-talarate/galactarate dehydratase E3384_00730 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site E3384_00730 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal E3384_00735 IPR000843 LacI-type HTH domain E3384_00735 IPR023588 Transcription regulator HTH, PurR E3384_00735 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_00735 IPR028082 Periplasmic binding protein-like I E3384_00740 IPR029028 Alpha/beta knot methyltransferases E3384_00740 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase E3384_00740 IPR001537 tRNA/rRNA methyltransferase, SpoU type E3384_00740 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E3384_00745 IPR013785 Aldolase-type TIM barrel E3384_00745 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent E3384_00745 IPR037396 FMN hydroxy acid dehydrogenase domain E3384_00745 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site E3384_00745 IPR020920 L-lactate dehydrogenase, bacterial E3384_00745 IPR000262 FMN-dependent dehydrogenase E3384_00750 IPR011711 GntR, C-terminal E3384_00750 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_00750 IPR036390 Winged helix DNA-binding domain superfamily E3384_00750 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_00750 IPR000524 Transcription regulator HTH, GntR E3384_00755 IPR003804 L-lactate permease E3384_00760 IPR008635 Coiled stalk of trimeric autotransporter adhesin E3384_00760 IPR008640 Head domain of trimeric autotransporter adhesin E3384_00760 IPR024973 ESPR domain E3384_00760 IPR011049 Serralysin-like metalloprotease, C-terminal E3384_00760 IPR005594 YadA-like, C-terminal E3384_00765 IPR021658 Domain of unknown function DUF3251 E3384_00765 IPR037125 Lipoprotein YajI-like superfamily E3384_00770 IPR021230 Protein of unknown function DUF2810 E3384_00780 IPR038026 MtlR-like superfamily E3384_00780 IPR007761 Mannitol repressor MtlR-like E3384_00785 IPR023027 Mannitol dehydrogenase, conserved site E3384_00785 IPR013131 Mannitol dehydrogenase, N-terminal E3384_00785 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_00785 IPR023028 Mannitol-1-phosphate 5-dehydrogenase E3384_00785 IPR000669 Mannitol dehydrogenase E3384_00785 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_00785 IPR013118 Mannitol dehydrogenase, C-terminal E3384_00785 IPR036291 NAD(P)-binding domain superfamily E3384_00790 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC E3384_00790 IPR036095 PTS system IIB component-like superfamily E3384_00790 IPR003352 Phosphotransferase system, EIIC E3384_00790 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_00790 IPR002178 PTS EIIA type-2 domain E3384_00790 IPR029503 Phosphotransferase system EIIB component, mannitol-specific E3384_00790 IPR016152 Phosphotransferase/anion transporter E3384_00790 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_00790 IPR013014 Phosphotransferase system, EIIC component, type 2 E3384_00800 IPR011223 Uncharacterised conserved protein UCP028770 E3384_00805 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain E3384_00810 IPR036249 Thioredoxin-like superfamily E3384_00810 IPR036282 Glutathione S-transferase, C-terminal domain superfamily E3384_00810 IPR034343 Uncharacterized GST-like protein YibF E3384_00810 IPR004045 Glutathione S-transferase, N-terminal E3384_00810 IPR004046 Glutathione S-transferase, C-terminal E3384_00810 IPR010987 Glutathione S-transferase, C-terminal-like E3384_00815 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain E3384_00815 IPR004534 L-seryl-tRNA(Sec) selenium transferase E3384_00815 IPR018319 L-seryl-tRNA selenium transferase-like E3384_00815 IPR015424 Pyridoxal phosphate-dependent transferase E3384_00815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_00820 IPR015191 Translation elongation factor SelB, winged helix, type 3 E3384_00820 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_00820 IPR000795 Transcription factor, GTP-binding domain E3384_00820 IPR009000 Translation protein, beta-barrel domain superfamily E3384_00820 IPR004161 Translation elongation factor EFTu-like, domain 2 E3384_00820 IPR036390 Winged helix DNA-binding domain superfamily E3384_00820 IPR015190 Translation elongation factor SelB, winged helix, type 2 E3384_00820 IPR031157 Tr-type G domain, conserved site E3384_00820 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal E3384_00820 IPR004535 Translation elongation factor, selenocysteine-specific E3384_00820 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_00825 IPR000600 ROK family E3384_00830 IPR016160 Aldehyde dehydrogenase, cysteine active site E3384_00830 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_00830 IPR016161 Aldehyde/histidinol dehydrogenase E3384_00830 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_00830 IPR029510 Aldehyde dehydrogenase, glutamic acid active site E3384_00830 IPR015590 Aldehyde dehydrogenase domain E3384_00835 IPR008928 Six-hairpin glycosidase superfamily E3384_00835 IPR012878 Beta-L-arabinofuranosidase, GH127 E3384_00845 IPR001303 Class II aldolase/adducin N-terminal E3384_00845 IPR036409 Class II aldolase/adducin N-terminal domain superfamily E3384_00845 IPR004661 L-ribulose-5-phosphate 4-epimerase E3384_00850 IPR001719 AP endonuclease 2 E3384_00850 IPR036237 Xylose isomerase-like superfamily E3384_00850 IPR004560 L-ribulose-5-phosphate 3-epimerase E3384_00850 IPR013022 Xylose isomerase-like, TIM barrel domain E3384_00855 IPR013785 Aldolase-type TIM barrel E3384_00855 IPR001754 Orotidine 5'-phosphate decarboxylase domain E3384_00855 IPR011060 Ribulose-phosphate binding barrel E3384_00855 IPR041710 HPS/KGPDC domain E3384_00860 IPR018485 Carbohydrate kinase, FGGY, C-terminal E3384_00860 IPR000577 Carbohydrate kinase, FGGY E3384_00860 IPR018483 Carbohydrate kinase, FGGY, conserved site E3384_00860 IPR018484 Carbohydrate kinase, FGGY, N-terminal E3384_00865 IPR004682 TRAP transporter solute receptor, DctP family E3384_00865 IPR018389 TRAP transporter solute receptor DctP/TeaA E3384_00865 IPR038404 TRAP transporter solute receptor DctP superfamily E3384_00870 IPR004681 TRAP transporter large membrane protein DctM E3384_00870 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit E3384_00875 IPR007387 TRAP transporter, small membrane protein DctQ E3384_00880 IPR032344 Protein of unknown function DUF4862 E3384_00880 IPR036237 Xylose isomerase-like superfamily E3384_00885 IPR037012 YhcH/YjgK/YiaL superfamily E3384_00885 IPR004375 YhcH/YjgK/YiaL family E3384_00890 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily E3384_00890 IPR023689 2,3-diketo-L-gulonate reductase E3384_00890 IPR003767 Malate/L-lactate dehydrogenase-like E3384_00895 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_00895 IPR005471 Transcription regulator IclR, N-terminal E3384_00895 IPR014757 Transcription regulator IclR, C-terminal E3384_00895 IPR029016 GAF-like domain superfamily E3384_00895 IPR036390 Winged helix DNA-binding domain superfamily E3384_00900 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_00900 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_00905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_00905 IPR015424 Pyridoxal phosphate-dependent transferase E3384_00905 IPR004839 Aminotransferase, class I/classII E3384_00910 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E3384_00910 IPR014635 Alpha-amylase, MalS type E3384_00910 IPR017853 Glycoside hydrolase superfamily E3384_00915 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain E3384_00920 IPR020449 Transcription regulator HTH, AraC- type E3384_00920 IPR028082 Periplasmic binding protein-like I E3384_00920 IPR018062 HTH domain AraC-type, conserved site E3384_00920 IPR018060 DNA binding HTH domain, AraC-type E3384_00920 IPR009057 Homeobox-like domain superfamily E3384_00925 IPR036237 Xylose isomerase-like superfamily E3384_00925 IPR013452 Xylose isomerase, bacterial-type E3384_00925 IPR001998 Xylose isomerase E3384_00930 IPR018485 Carbohydrate kinase, FGGY, C-terminal E3384_00930 IPR006000 Xylulokinase E3384_00930 IPR000577 Carbohydrate kinase, FGGY E3384_00930 IPR018483 Carbohydrate kinase, FGGY, conserved site E3384_00930 IPR018484 Carbohydrate kinase, FGGY, N-terminal E3384_00935 IPR008024 YiaAB two helix E3384_00935 IPR038972 Inner membrane protein YiaA-like E3384_00940 IPR002656 Acyltransferase 3 E3384_00940 IPR032905 O-acetyltransferase WecH E3384_00950 IPR025728 YsaB-like lipoprotein E3384_00955 IPR006194 Glycine-tRNA synthetase, heterodimeric E3384_00955 IPR002310 Glycine-tRNA ligase, alpha subunit E3384_00960 IPR006194 Glycine-tRNA synthetase, heterodimeric E3384_00960 IPR015944 Glycine-tRNA ligase, beta subunit E3384_00960 IPR008909 DALR anticodon binding E3384_00965 IPR012337 Ribonuclease H-like superfamily E3384_00965 IPR001584 Integrase, catalytic core E3384_00965 IPR036397 Ribonuclease H superfamily E3384_00965 IPR025948 HTH-like domain E3384_00965 IPR038965 Transposase InsF-like E3384_00990 IPR011129 Cold shock domain E3384_00990 IPR019844 Cold-shock (CSD) domain E3384_00990 IPR002059 Cold-shock protein, DNA-binding E3384_00990 IPR012340 Nucleic acid-binding, OB-fold E3384_00990 IPR012156 Cold shock, CspA E3384_00995 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_00995 IPR001387 Cro/C1-type helix-turn-helix domain E3384_01000 IPR021413 Protein of unknown function DUF3053 E3384_01005 IPR036291 NAD(P)-binding domain superfamily E3384_01005 IPR023756 Glyoxylate/hydroxypyruvate reductase B E3384_01005 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain E3384_01005 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site E3384_01005 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3384_01010 IPR006690 Outer membrane protein, OmpA-like, conserved site E3384_01010 IPR036737 OmpA-like domain superfamily E3384_01010 IPR006665 OmpA-like domain E3384_01010 IPR039567 Glycine zipper domain E3384_01010 IPR006664 Outer membrane protein, bacterial E3384_01015 IPR006657 Molybdopterin dinucleotide-binding domain E3384_01015 IPR006656 Molybdopterin oxidoreductase E3384_01015 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_01015 IPR041460 Molybdopterin oxidoreductase, N-terminal E3384_01015 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain E3384_01015 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase E3384_01015 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_01020 IPR016181 Acyl-CoA N-acyltransferase E3384_01020 IPR000182 GNAT domain E3384_01025 IPR004597 DNA-3-methyladenine glycosylase I E3384_01025 IPR011257 DNA glycosylase E3384_01025 IPR005019 Methyladenine glycosylase E3384_01030 IPR006315 Outer membrane autotransporter barrel E3384_01030 IPR016955 Autotransporter, YhjY, predicted E3384_01030 IPR036709 Autotransporter beta-domain superfamily E3384_01030 IPR005546 Autotransporter beta-domain E3384_01035 IPR036937 Fimbrial-type adhesion domain superfamily E3384_01035 IPR000259 Fimbrial-type adhesion domain E3384_01035 IPR008966 Adhesion domain superfamily E3384_01040 IPR001829 Pili assembly chaperone, bacterial E3384_01040 IPR016147 Pili assembly chaperone, N-terminal E3384_01040 IPR018046 Pili assembly chaperone, conserved site E3384_01040 IPR016148 Pili assembly chaperone, C-terminal E3384_01040 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_01040 IPR013783 Immunoglobulin-like fold E3384_01040 IPR008962 PapD-like superfamily E3384_01045 IPR042186 Outer membrane usher protein FimD, plug domain E3384_01045 IPR025949 PapC-like, C-terminal domain E3384_01045 IPR025885 PapC, N-terminal domain E3384_01045 IPR000015 Outer membrane usher protein E3384_01045 IPR037224 PapC, N-terminal domain superfamily E3384_01045 IPR018030 Fimbrial membrane usher, conserved site E3384_01050 IPR000259 Fimbrial-type adhesion domain E3384_01050 IPR008966 Adhesion domain superfamily E3384_01050 IPR036937 Fimbrial-type adhesion domain superfamily E3384_01055 IPR008966 Adhesion domain superfamily E3384_01055 IPR000259 Fimbrial-type adhesion domain E3384_01055 IPR036937 Fimbrial-type adhesion domain superfamily E3384_01060 IPR040423 Phosphoethanolamine transferase E3384_01060 IPR000917 Sulfatase, N-terminal E3384_01060 IPR012549 Phosphoethanolamine transferase, N-terminal E3384_01060 IPR017850 Alkaline-phosphatase-like, core domain superfamily E3384_01075 IPR028082 Periplasmic binding protein-like I E3384_01075 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_01075 IPR000843 LacI-type HTH domain E3384_01085 IPR017588 Uric acid permease UacT-like E3384_01085 IPR006042 Xanthine/uracil permease E3384_01085 IPR006043 Xanthine/uracil/vitamin C permease E3384_01090 IPR000914 Solute-binding protein family 5 domain E3384_01090 IPR030678 Peptide/nickel binding protein, MppA-type E3384_01090 IPR039424 Solute-binding protein family 5 E3384_01090 IPR023765 Solute-binding protein family 5, conserved site E3384_01095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_01095 IPR035906 MetI-like superfamily E3384_01100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_01100 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E3384_01100 IPR035906 MetI-like superfamily E3384_01105 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01105 IPR003593 AAA+ ATPase domain E3384_01105 IPR003439 ABC transporter-like E3384_01105 IPR017871 ABC transporter, conserved site E3384_01105 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E3384_01110 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01110 IPR017871 ABC transporter, conserved site E3384_01110 IPR003439 ABC transporter-like E3384_01110 IPR003593 AAA+ ATPase domain E3384_01110 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E3384_01115 IPR018227 Amino acid/polyamine transporter 2 E3384_01125 IPR025253 Type I toxin-antitoxin system, toxin Ldr E3384_01130 IPR017744 Cellulose biosynthesis protein BcsG E3384_01135 IPR019995 Cellulose biosynthesis, BcsF/YhjT E3384_01140 IPR017745 Cellulose biosynthesis protein BcsE E3384_01145 IPR024487 Protein YhjR E3384_01150 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01150 IPR017746 Cellulose synthase operon protein BcsQ E3384_01155 IPR003919 Cellulose synthase, subunit A E3384_01155 IPR009875 PilZ domain E3384_01155 IPR029044 Nucleotide-diphospho-sugar transferases E3384_01155 IPR001173 Glycosyltransferase 2-like E3384_01160 IPR003920 Cellulose synthase, subunit B E3384_01160 IPR018513 Cellulose synthase BcsB, bacterial E3384_01160 IPR008979 Galactose-binding-like domain superfamily E3384_01165 IPR008928 Six-hairpin glycosidase superfamily E3384_01165 IPR019834 Glycoside hydrolase, family 8, conserved site E3384_01165 IPR002037 Glycoside hydrolase, family 8 E3384_01165 IPR012341 Six-hairpin glycosidase-like superfamily E3384_01170 IPR019734 Tetratricopeptide repeat E3384_01170 IPR008410 Cellulose synthase operon C, C-terminal E3384_01170 IPR013026 Tetratricopeptide repeat-containing domain E3384_01170 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_01175 IPR035919 EAL domain superfamily E3384_01175 IPR003660 HAMP domain E3384_01175 IPR001633 EAL domain E3384_01175 IPR000160 GGDEF domain E3384_01175 IPR029787 Nucleotide cyclase E3384_01175 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 E3384_01180 IPR018107 Sodium:dicarboxylate symporter, conserved site E3384_01180 IPR023954 C4-dicarboxylate transport protein E3384_01180 IPR036458 Sodium:dicarboxylate symporter superfamily E3384_01180 IPR001991 Sodium:dicarboxylate symporter E3384_01185 IPR011765 Peptidase M16, N-terminal E3384_01185 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like E3384_01185 IPR007863 Peptidase M16, C-terminal E3384_01190 IPR029056 Ribokinase-like E3384_01190 IPR011611 Carbohydrate kinase PfkB E3384_01190 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_01195 IPR001633 EAL domain E3384_01195 IPR035919 EAL domain superfamily E3384_01200 IPR007844 AsmA E3384_01205 IPR005828 Major facilitator, sugar transporter-like E3384_01205 IPR005829 Sugar transporter, conserved site E3384_01205 IPR020846 Major facilitator superfamily domain E3384_01205 IPR011701 Major facilitator superfamily E3384_01205 IPR036259 MFS transporter superfamily E3384_01205 IPR004736 MFS transporter, metabolite:H symporter E3384_01210 IPR017039 Virulence factor BrkB E3384_01210 IPR005274 Inner membrane protein YhjD E3384_01215 IPR000847 Transcription regulator HTH, LysR E3384_01215 IPR005119 LysR, substrate-binding E3384_01215 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_01215 IPR036390 Winged helix DNA-binding domain superfamily E3384_01220 IPR000792 Transcription regulator LuxR, C-terminal E3384_01220 IPR016032 Signal transduction response regulator, C-terminal effector E3384_01235 IPR023715 Trehalase, cytoplasmic E3384_01235 IPR001661 Glycoside hydrolase, family 37 E3384_01235 IPR018232 Glycoside hydrolase, family 37, conserved site E3384_01235 IPR008928 Six-hairpin glycosidase superfamily E3384_01235 IPR012341 Six-hairpin glycosidase-like superfamily E3384_01240 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily E3384_01240 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_01240 IPR000524 Transcription regulator HTH, GntR E3384_01240 IPR036390 Winged helix DNA-binding domain superfamily E3384_01240 IPR011663 UbiC transcription regulator-associated E3384_01245 IPR001347 Sugar isomerase (SIS) E3384_01245 IPR035488 Fructosamine deglycase FrlB, SIS domain 1 E3384_01245 IPR035490 GlmS/FrlB, SIS domain 2 E3384_01245 IPR024713 Fructosamine deglycase FrlB E3384_01250 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_01250 IPR011611 Carbohydrate kinase PfkB E3384_01250 IPR029056 Ribokinase-like E3384_01255 IPR004668 Anaerobic c4-dicarboxylate membrane transporter E3384_01260 IPR037152 L-asparaginase, N-terminal domain superfamily E3384_01260 IPR040919 Asparaginase/glutaminase, C-terminal E3384_01260 IPR027474 L-asparaginase, N-terminal E3384_01260 IPR027475 Asparaginase/glutaminase, active site 2 E3384_01260 IPR027473 L-asparaginase, C-terminal E3384_01260 IPR020827 Asparaginase/glutaminase, active site 1 E3384_01260 IPR006034 Asparaginase/glutaminase-like E3384_01260 IPR036152 Asparaginase/glutaminase-like superfamily E3384_01260 IPR004550 L-asparaginase, type II E3384_01265 IPR023753 FAD/NAD(P)-binding domain E3384_01265 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3384_01265 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I E3384_01265 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily E3384_01265 IPR006322 Glutathione reductase, eukaryote/bacterial E3384_01265 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_01265 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site E3384_01270 IPR007473 Ribosomal RNA large subunit methyltransferase J E3384_01270 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_01270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_01275 IPR033879 Undecaprenyl-diphosphatase E3384_01275 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase E3384_01275 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily E3384_01280 IPR001567 Peptidase M3A/M3B catalytic domain E3384_01280 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 E3384_01285 IPR007536 Ribosomal RNA small subunit methyltransferase J E3384_01285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_01290 IPR036259 MFS transporter superfamily E3384_01290 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B E3384_01290 IPR000109 Proton-dependent oligopeptide transporter family E3384_01290 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site E3384_01290 IPR005279 Dipeptide/tripeptide permease E3384_01295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_01295 IPR006016 UspA E3384_01295 IPR006015 Universal stress protein A family E3384_01300 IPR019598 Universal stress protein B E3384_01305 IPR001204 Phosphate transporter E3384_01310 IPR023166 HI0933-like insert domain superfamily E3384_01310 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like E3384_01310 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_01315 IPR039562 Membrane fusion protein, biotin-lipoyl like domain E3384_01320 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01320 IPR017871 ABC transporter, conserved site E3384_01320 IPR000412 ABC-2 transporter E3384_01320 IPR003593 AAA+ ATPase domain E3384_01320 IPR003439 ABC transporter-like E3384_01325 IPR000412 ABC-2 transporter E3384_01330 IPR014864 Transcription factor, NikR, nickel binding C-terminal E3384_01330 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal E3384_01330 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria E3384_01330 IPR022988 Nickel-responsive transcriptional regulator NikR E3384_01330 IPR010985 Ribbon-helix-helix E3384_01330 IPR002145 Ribbon-helix-helix protein, CopG E3384_01330 IPR013321 Arc-type ribbon-helix-helix E3384_01335 IPR037143 4'-phosphopantetheinyl transferase domain superfamily E3384_01335 IPR008278 4'-phosphopantetheinyl transferase domain E3384_01340 IPR002549 Transmembrane protein TqsA-like E3384_01345 IPR023008 Uncharacterized MFS-type transporter YhhS-like E3384_01345 IPR011701 Major facilitator superfamily E3384_01345 IPR020846 Major facilitator superfamily domain E3384_01345 IPR036259 MFS transporter superfamily E3384_01350 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich E3384_01350 IPR014894 Protein DcrB E3384_01355 IPR003744 Queuosine precursor transporter E3384_01360 IPR022931 Sulfur carrier protein TusA E3384_01360 IPR001455 TusA-like domain E3384_01360 IPR036868 TusA-like domain superfamily E3384_01365 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E3384_01365 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding E3384_01365 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily E3384_01365 IPR004090 Chemotaxis methyl-accepting receptor E3384_01365 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site E3384_01365 IPR003660 HAMP domain E3384_01370 IPR001757 P-type ATPase E3384_01370 IPR036163 Heavy metal-associated domain superfamily E3384_01370 IPR006121 Heavy metal-associated domain, HMA E3384_01370 IPR036412 HAD-like superfamily E3384_01370 IPR027256 P-type ATPase, subfamily IB E3384_01370 IPR023298 P-type ATPase, transmembrane domain superfamily E3384_01370 IPR023214 HAD superfamily E3384_01370 IPR017969 Heavy-metal-associated, conserved site E3384_01370 IPR008250 P-type ATPase, A domain superfamily E3384_01370 IPR018303 P-type ATPase, phosphorylation site E3384_01370 IPR023299 P-type ATPase, cytoplasmic domain N E3384_01375 IPR012506 YhhN-like E3384_01380 IPR019635 Protein of unknown function DUF2500 E3384_01385 IPR009525 Protein of unknown function DUF1145 E3384_01390 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_01390 IPR004398 RNA methyltransferase, RsmD E3384_01390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_01395 IPR003593 AAA+ ATPase domain E3384_01395 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain E3384_01395 IPR013822 Signal recognition particle SRP54, helical bundle E3384_01395 IPR004390 Signal-recognition particle receptor FtsY E3384_01395 IPR036225 SRP/SRP receptor, N-terminal E3384_01395 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily E3384_01395 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01400 IPR005286 Cell division protein FtsE, ATP-binding E3384_01400 IPR017871 ABC transporter, conserved site E3384_01400 IPR003439 ABC transporter-like E3384_01400 IPR003593 AAA+ ATPase domain E3384_01400 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01405 IPR004513 Cell division protein FtsX E3384_01405 IPR040690 FtsX, extracellular domain E3384_01405 IPR003838 ABC transporter permease protein domain E3384_01410 IPR013324 RNA polymerase sigma factor, region 3/4-like E3384_01410 IPR013325 RNA polymerase sigma factor, region 2 E3384_01410 IPR007630 RNA polymerase sigma-70 region 4 E3384_01410 IPR007627 RNA polymerase sigma-70 region 2 E3384_01410 IPR000943 RNA polymerase sigma-70 E3384_01410 IPR014284 RNA polymerase sigma-70 like domain E3384_01410 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria E3384_01415 IPR028082 Periplasmic binding protein-like I E3384_01415 IPR028081 Leucine-binding protein domain E3384_01415 IPR000709 Leu/Ile/Val-binding protein E3384_01425 IPR032900 PanD regulatory factor PanZ E3384_01425 IPR000182 GNAT domain E3384_01425 IPR016181 Acyl-CoA N-acyltransferase E3384_01425 IPR040448 PanZ, acetyltransferase (GNAT) domain E3384_01430 IPR028081 Leucine-binding protein domain E3384_01430 IPR000709 Leu/Ile/Val-binding protein E3384_01430 IPR028082 Periplasmic binding protein-like I E3384_01435 IPR001851 ABC transporter, permease E3384_01440 IPR001851 ABC transporter, permease E3384_01440 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal E3384_01445 IPR017871 ABC transporter, conserved site E3384_01445 IPR003593 AAA+ ATPase domain E3384_01445 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01445 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal E3384_01445 IPR003439 ABC transporter-like E3384_01450 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01450 IPR003593 AAA+ ATPase domain E3384_01450 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein E3384_01450 IPR003439 ABC transporter-like E3384_01450 IPR017871 ABC transporter, conserved site E3384_01460 IPR006059 Bacterial extracellular solute-binding protein E3384_01460 IPR006061 Solute-binding family 1, conserved site E3384_01465 IPR035906 MetI-like superfamily E3384_01465 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_01470 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_01470 IPR035906 MetI-like superfamily E3384_01470 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE E3384_01475 IPR008995 Molybdate/tungstate binding, C-terminal E3384_01475 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC E3384_01475 IPR003593 AAA+ ATPase domain E3384_01475 IPR003439 ABC transporter-like E3384_01475 IPR017871 ABC transporter, conserved site E3384_01475 IPR040582 MalK, OB fold domain E3384_01475 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01480 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily E3384_01480 IPR030395 Glycerophosphodiester phosphodiesterase domain E3384_01485 IPR020158 Protein of unknown function DUF2756 E3384_01490 IPR000101 Gamma-glutamyltranspeptidase E3384_01490 IPR029055 Nucleophile aminohydrolases, N-terminal E3384_01495 IPR001559 Phosphotriesterase E3384_01495 IPR032466 Metal-dependent hydrolase E3384_01495 IPR017947 Aryldialkylphosphatase, zinc-binding site E3384_01510 IPR002139 Ribokinase/fructokinase E3384_01510 IPR011611 Carbohydrate kinase PfkB E3384_01510 IPR011877 Ribokinase E3384_01510 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_01510 IPR029056 Ribokinase-like E3384_01515 IPR016181 Acyl-CoA N-acyltransferase E3384_01515 IPR000182 GNAT domain E3384_01520 IPR036291 NAD(P)-binding domain superfamily E3384_01520 IPR000683 Oxidoreductase, N-terminal E3384_01520 IPR004104 Oxidoreductase, C-terminal E3384_01525 IPR012093 Pirin E3384_01525 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain E3384_01525 IPR003829 Pirin, N-terminal domain E3384_01525 IPR011051 RmlC-like cupin domain superfamily E3384_01525 IPR014710 RmlC-like jelly roll fold E3384_01530 IPR028082 Periplasmic binding protein-like I E3384_01530 IPR000843 LacI-type HTH domain E3384_01530 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_01530 IPR001761 Periplasmic binding protein/LacI sugar binding domain E3384_01535 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01535 IPR006001 Carbohydrate kinase, thermoresistant glucokinase E3384_01535 IPR031322 Shikimate kinase/gluconokinase E3384_01540 IPR003474 Gluconate transporter E3384_01550 IPR012280 Semialdehyde dehydrogenase, dimerisation domain E3384_01550 IPR000534 Semialdehyde dehydrogenase, NAD-binding E3384_01550 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type E3384_01550 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site E3384_01550 IPR036291 NAD(P)-binding domain superfamily E3384_01550 IPR012080 Aspartate-semialdehyde dehydrogenase E3384_01555 IPR037439 1,4-alpha-glucan-branching enzyme E3384_01555 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta E3384_01555 IPR014756 Immunoglobulin E-set E3384_01555 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB E3384_01555 IPR004193 Glycoside hydrolase, family 13, N-terminal E3384_01555 IPR017853 Glycoside hydrolase superfamily E3384_01555 IPR013780 Glycosyl hydrolase, all-beta E3384_01555 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E3384_01555 IPR013783 Immunoglobulin-like fold E3384_01560 IPR022844 Glycogen debranching enzyme, bacterial E3384_01560 IPR017853 Glycoside hydrolase superfamily E3384_01560 IPR014756 Immunoglobulin E-set E3384_01560 IPR011837 Glycogen debranching enzyme, GlgX type E3384_01560 IPR013780 Glycosyl hydrolase, all-beta E3384_01560 IPR004193 Glycoside hydrolase, family 13, N-terminal E3384_01560 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E3384_01560 IPR013783 Immunoglobulin-like fold E3384_01560 IPR040784 Glycogen debranching enzyme, C-terminal domain E3384_01565 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial E3384_01565 IPR005836 ADP-glucose pyrophosphorylase, conserved site E3384_01565 IPR005835 Nucleotidyl transferase domain E3384_01565 IPR011831 Glucose-1-phosphate adenylyltransferase E3384_01565 IPR011004 Trimeric LpxA-like superfamily E3384_01565 IPR029044 Nucleotide-diphospho-sugar transferases E3384_01570 IPR001296 Glycosyl transferase, family 1 E3384_01570 IPR011835 Bacterial/plant glycogen synthase E3384_01570 IPR013534 Starch synthase, catalytic domain E3384_01575 IPR035090 Phosphorylase pyridoxal-phosphate attachment site E3384_01575 IPR000811 Glycosyl transferase, family 35 E3384_01575 IPR011833 Glycogen/starch/alpha-glucan phosphorylase E3384_01580 IPR029016 GAF-like domain superfamily E3384_01580 IPR036390 Winged helix DNA-binding domain superfamily E3384_01580 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_01580 IPR005471 Transcription regulator IclR, N-terminal E3384_01580 IPR014757 Transcription regulator IclR, C-terminal E3384_01585 IPR020624 Schiff base-forming aldolase, conserved site E3384_01585 IPR013785 Aldolase-type TIM barrel E3384_01585 IPR002220 DapA-like E3384_01585 IPR020625 Schiff base-forming aldolase, active site E3384_01590 IPR042096 Dihydroxy-acid dehydratase, C-terminal E3384_01590 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase E3384_01590 IPR004404 Dihydroxy-acid dehydratase E3384_01590 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site E3384_01590 IPR037237 IlvD/EDD, N-terminal domain E3384_01595 IPR036259 MFS transporter superfamily E3384_01595 IPR011701 Major facilitator superfamily E3384_01595 IPR020846 Major facilitator superfamily domain E3384_01600 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA E3384_01600 IPR018211 Alcohol dehydrogenase, iron-type, conserved site E3384_01600 IPR016205 Glycerol dehydrogenase E3384_01615 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase E3384_01615 IPR031656 Alpha-glycerophosphate oxidase, C-terminal E3384_01615 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily E3384_01615 IPR006076 FAD dependent oxidoreductase E3384_01615 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_01620 IPR023695 Thiosulfate sulfurtransferase, bacterial E3384_01620 IPR036873 Rhodanese-like domain superfamily E3384_01620 IPR001763 Rhodanese-like domain E3384_01625 IPR023662 Rhomboid protease GlpG E3384_01625 IPR035952 Rhomboid-like superfamily E3384_01625 IPR022764 Peptidase S54, rhomboid domain E3384_01625 IPR022732 Peptidase S54, GlpG peptidase, N-terminal E3384_01625 IPR038236 GlpG peptidase, N-terminal domain superfamily E3384_01630 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_01630 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_01630 IPR037171 NagB/RpiA transferase-like E3384_01630 IPR001034 DeoR-type HTH domain E3384_01630 IPR014036 DeoR C-terminal sensor domain E3384_01630 IPR036390 Winged helix DNA-binding domain superfamily E3384_01635 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_01635 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_01635 IPR017183 Sigma54-dependent transcriptional activator, RtcR E3384_01635 IPR009715 Regulator of RNA terminal phosphate cyclase E3384_01635 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01635 IPR003593 AAA+ ATPase domain E3384_01645 IPR001233 tRNA-splicing ligase, RtcB E3384_01645 IPR036025 tRNA-splicing ligase RtcB-like superfamily E3384_01650 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain E3384_01650 IPR023797 RNA 3'-terminal phosphate cyclase domain E3384_01650 IPR017770 RNA 3'-terminal phosphate cyclase type 1 E3384_01650 IPR000228 RNA 3'-terminal phosphate cyclase E3384_01650 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily E3384_01650 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily E3384_01650 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta E3384_01655 IPR007337 RelB antitoxin/Antitoxin DinJ E3384_01655 IPR026262 Antitoxin DinJ E3384_01655 IPR013321 Arc-type ribbon-helix-helix E3384_01660 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family E3384_01660 IPR004386 Toxin-antitoxin system, YafQ-like toxin E3384_01660 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily E3384_01665 IPR016032 Signal transduction response regulator, C-terminal effector E3384_01665 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_01665 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_01665 IPR000792 Transcription regulator LuxR, C-terminal E3384_01665 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01665 IPR023768 Transcriptional regulator HTH-type, MalT E3384_01665 IPR041617 MalT-like TPR region E3384_01670 IPR011833 Glycogen/starch/alpha-glucan phosphorylase E3384_01670 IPR000811 Glycosyl transferase, family 35 E3384_01670 IPR035090 Phosphorylase pyridoxal-phosphate attachment site E3384_01675 IPR017853 Glycoside hydrolase superfamily E3384_01675 IPR003385 Glycoside hydrolase, family 77 E3384_01680 IPR003474 Gluconate transporter E3384_01685 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal E3384_01685 IPR000361 FeS cluster biogenesis E3384_01685 IPR017726 Fe/S biogenesis protein NfuA E3384_01685 IPR034904 Fe-S cluster assembly domain superfamily E3384_01685 IPR035903 HesB-like domain superfamily E3384_01690 IPR005222 Competence protein ComF E3384_01690 IPR000836 Phosphoribosyltransferase domain E3384_01690 IPR029057 Phosphoribosyltransferase-like E3384_01695 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase E3384_01695 IPR000073 Alpha/beta hydrolase fold-1 E3384_01695 IPR029058 Alpha/Beta hydrolase fold E3384_01700 IPR010106 Recombination-promoting nuclease RpnA E3384_01700 IPR006842 Transposase (putative), YhgA-like E3384_01705 IPR023732 Probable [Fe-S]-dependent transcriptional repressor E3384_01705 IPR015102 Transcriptional regulator HTH-type, FeoC E3384_01705 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_01705 IPR036390 Winged helix DNA-binding domain superfamily E3384_01710 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01710 IPR030389 FeoB-type guanine nucleotide-binding (G) domain E3384_01710 IPR041069 FeoB, cytosolic helical domain E3384_01710 IPR011640 Ferrous iron transport protein B, C-terminal E3384_01710 IPR003373 Ferrous iron transport protein B E3384_01710 IPR005225 Small GTP-binding protein domain E3384_01710 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain E3384_01715 IPR008988 Transcriptional repressor, C-terminal E3384_01715 IPR007167 Ferrous iron transporter FeoA domain E3384_01715 IPR038157 Ferrous iron transporter, core domain E3384_01720 IPR023323 Tex-like domain superfamily E3384_01720 IPR022967 RNA-binding domain, S1 E3384_01720 IPR003029 S1 domain E3384_01720 IPR006641 YqgF/RNase H-like domain E3384_01720 IPR032639 Tex protein, YqgF-like domain E3384_01720 IPR037027 YqgF/RNase H-like domain superfamily E3384_01720 IPR012337 Ribonuclease H-like superfamily E3384_01720 IPR012340 Nucleic acid-binding, OB-fold E3384_01720 IPR010994 RuvA domain 2-like E3384_01720 IPR018974 Tex-like protein, N-terminal E3384_01720 IPR023319 Tex-like protein, HTH domain superfamily E3384_01720 IPR041692 HHH domain 9 E3384_01725 IPR028624 Transcription elongation factor GreA/GreB E3384_01725 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal E3384_01725 IPR023459 Transcription elongation factor GreA/GreB family E3384_01725 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily E3384_01725 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal E3384_01725 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily E3384_01725 IPR006358 Transcription elongation factor GreB E3384_01725 IPR018151 Transcription elongation factor, GreA/GreB, conserved site E3384_01730 IPR011006 CheY-like superfamily E3384_01730 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_01730 IPR039420 Transcriptional regulatory protein WalR-like E3384_01730 IPR001789 Signal transduction response regulator, receiver domain E3384_01730 IPR016032 Signal transduction response regulator, C-terminal effector E3384_01730 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_01735 IPR005467 Histidine kinase domain E3384_01735 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_01735 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_01735 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_01735 IPR003660 HAMP domain E3384_01735 IPR003594 Histidine kinase/HSP90-like ATPase E3384_01735 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_01740 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal E3384_01740 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising E3384_01740 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site E3384_01740 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal E3384_01745 IPR025291 Protein of unknown function DUF4153 E3384_01750 IPR016154 Heat shock protein Hsp33, C-terminal E3384_01750 IPR016153 Heat shock protein Hsp33, N-terminal E3384_01750 IPR000397 Heat shock protein Hsp33 E3384_01750 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily E3384_01755 IPR025708 Heat shock protein 15 E3384_01755 IPR002942 RNA-binding S4 domain E3384_01755 IPR036986 RNA-binding S4 domain superfamily E3384_01760 IPR041492 Haloacid dehalogenase-like hydrolase E3384_01760 IPR006439 HAD hydrolase, subfamily IA E3384_01760 IPR036412 HAD-like superfamily E3384_01760 IPR023214 HAD superfamily E3384_01765 IPR010771 Intracellular growth attenuator IgaA E3384_01770 IPR015797 NUDIX hydrolase-like domain superfamily E3384_01770 IPR020084 NUDIX hydrolase, conserved site E3384_01770 IPR000086 NUDIX hydrolase domain E3384_01775 IPR012338 Beta-lactamase/transpeptidase-like E3384_01775 IPR023346 Lysozyme-like domain superfamily E3384_01775 IPR001264 Glycosyl transferase, family 51 E3384_01775 IPR036950 Penicillin binding protein transglycosylase domain E3384_01775 IPR031376 Penicillin-binding protein, OB-like domain E3384_01775 IPR001460 Penicillin-binding protein, transpeptidase E3384_01785 IPR007813 Fimbrial assembly PilN E3384_01795 IPR019684 HofP protein E3384_01800 IPR004845 Type II secretion system GspD, conserved site E3384_01800 IPR011662 Secretin/TonB, short N-terminal domain E3384_01800 IPR013355 Type IV pilus secretin PilQ E3384_01800 IPR038591 NolW-like superfamily E3384_01800 IPR005644 NolW-like E3384_01800 IPR004846 Type II/III secretion system E3384_01800 IPR001775 GspD/PilQ family E3384_01805 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01805 IPR000623 Shikimate kinase/Threonine synthase-like 1 E3384_01805 IPR023000 Shikimate kinase, conserved site E3384_01805 IPR031322 Shikimate kinase/gluconokinase E3384_01810 IPR030960 3-dehydroquinate synthase domain E3384_01810 IPR030963 3-dehydroquinate synthase family E3384_01810 IPR016037 3-dehydroquinate synthase AroB E3384_01815 IPR036680 Sporulation-like domain superfamily E3384_01815 IPR007730 Sporulation-like domain E3384_01815 IPR032899 Cell division protein DamX E3384_01820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_01820 IPR012263 Adenine modification methylase, M.EcoRV-type E3384_01820 IPR023095 Adenine-specific methyltransferase, domain 2 E3384_01820 IPR012327 D12 class N6 adenine-specific DNA methyltransferase E3384_01820 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_01825 IPR013785 Aldolase-type TIM barrel E3384_01825 IPR026019 Ribulose-phosphate 3-epimerase E3384_01825 IPR011060 Ribulose-phosphate binding barrel E3384_01825 IPR000056 Ribulose-phosphate 3-epimerase-like E3384_01830 IPR036412 HAD-like superfamily E3384_01830 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic E3384_01830 IPR037512 Phosphoglycolate phosphatase, prokaryotic E3384_01830 IPR023198 Phosphoglycolate phosphatase-like, domain 2 E3384_01830 IPR006439 HAD hydrolase, subfamily IA E3384_01830 IPR041492 Haloacid dehalogenase-like hydrolase E3384_01830 IPR023214 HAD superfamily E3384_01835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_01835 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E3384_01835 IPR024109 Tryptophan-tRNA ligase, bacterial-type E3384_01835 IPR002305 Aminoacyl-tRNA synthetase, class Ic E3384_01835 IPR002306 Tryptophan-tRNA ligase E3384_01840 IPR025318 Protein of unknown function DUF4223 E3384_01845 IPR005546 Autotransporter beta-domain E3384_01845 IPR036709 Autotransporter beta-domain superfamily E3384_01850 IPR037115 Sirohaem synthase, dimerisation domain superfamily E3384_01850 IPR006367 Sirohaem synthase, N-terminal E3384_01850 IPR019478 Sirohaem synthase, dimerisation domain E3384_01850 IPR028281 Siroheme synthase, central domain E3384_01850 IPR012409 Sirohaem synthase E3384_01850 IPR014776 Tetrapyrrole methylase, subdomain 2 E3384_01850 IPR036291 NAD(P)-binding domain superfamily E3384_01850 IPR014777 Tetrapyrrole methylase, subdomain 1 E3384_01850 IPR000878 Tetrapyrrole methylase E3384_01850 IPR035996 Tetrapyrrole methylase superfamily E3384_01850 IPR006366 Uroporphyrin-III C-methyltransferase E3384_01850 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site E3384_01855 IPR000292 Formate/nitrite transporter E3384_01855 IPR023271 Aquaporin-like E3384_01855 IPR024002 Formate/nitrite transporter, conserved site E3384_01860 IPR017881 Nitrite reductase (NADH) small subunit E3384_01860 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type E3384_01860 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily E3384_01865 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily E3384_01865 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB E3384_01865 IPR017121 Nitrite reductase [NAD(P)H], large subunit E3384_01865 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain E3384_01865 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site E3384_01865 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal E3384_01865 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain E3384_01865 IPR023753 FAD/NAD(P)-binding domain E3384_01865 IPR007419 BFD-like [2Fe-2S]-binding domain E3384_01865 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_01865 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily E3384_01870 IPR020846 Major facilitator superfamily domain E3384_01870 IPR011701 Major facilitator superfamily E3384_01870 IPR036259 MFS transporter superfamily E3384_01870 IPR023528 Major facilitator superfamily transporter, TsgA E3384_01875 IPR029000 Cyclophilin-like domain superfamily E3384_01875 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site E3384_01875 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain E3384_01880 IPR022541 Protein of unknown function DUF2559 E3384_01885 IPR036597 Fido-like domain superfamily E3384_01885 IPR003812 Fido domain E3384_01890 IPR017926 Glutamine amidotransferase E3384_01890 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain E3384_01890 IPR029062 Class I glutamine amidotransferase-like E3384_01895 IPR015424 Pyridoxal phosphate-dependent transferase E3384_01895 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_01895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_01895 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria E3384_01895 IPR004636 Acetylornithine/Succinylornithine transaminase family E3384_01895 IPR005814 Aminotransferase class-III E3384_01900 IPR032692 Integral membrane protein YccS, N-terminal E3384_01900 IPR010020 Integral membrane protein, YccS/YhfK E3384_01905 IPR018490 Cyclic nucleotide-binding-like E3384_01905 IPR018488 Cyclic nucleotide-binding, conserved site E3384_01905 IPR018335 Transcription regulator HTH, Crp-type, conserved site E3384_01905 IPR012318 Crp-type HTH domain E3384_01905 IPR014710 RmlC-like jelly roll fold E3384_01905 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_01905 IPR036390 Winged helix DNA-binding domain superfamily E3384_01905 IPR000595 Cyclic nucleotide-binding domain E3384_01910 IPR036102 OsmC/Ohr superfamily E3384_01910 IPR003718 OsmC/Ohr family E3384_01910 IPR015946 K homology domain-like, alpha/beta E3384_01915 IPR006083 Phosphoribulokinase/uridine kinase E3384_01915 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01915 IPR006082 Phosphoribulokinase E3384_01920 IPR010648 Uncharacterised protein family UPF0270 E3384_01920 IPR036685 YehU-like superfamily E3384_01925 IPR029058 Alpha/Beta hydrolase fold E3384_01925 IPR012020 AB hydrolase 4 family E3384_01925 IPR000952 AB hydrolase 4, conserved site E3384_01925 IPR000073 Alpha/beta hydrolase fold-1 E3384_01930 IPR011008 Dimeric alpha-beta barrel E3384_01930 IPR014910 Putative monooxygenase YdhR E3384_01935 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_01935 IPR000847 Transcription regulator HTH, LysR E3384_01935 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain E3384_01935 IPR036390 Winged helix DNA-binding domain superfamily E3384_01935 IPR005119 LysR, substrate-binding E3384_01940 IPR003593 AAA+ ATPase domain E3384_01940 IPR017871 ABC transporter, conserved site E3384_01940 IPR003439 ABC transporter-like E3384_01940 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_01940 IPR032781 ABC-transporter extension domain E3384_01945 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG E3384_01945 IPR029039 Flavoprotein-like superfamily E3384_01945 IPR003680 Flavodoxin-like fold E3384_01950 IPR004771 K+/H+ exchanger E3384_01950 IPR003148 Regulator of K+ conductance, N-terminal E3384_01950 IPR036291 NAD(P)-binding domain superfamily E3384_01950 IPR020884 Glutathione-regulated potassium-efflux system protein KefB E3384_01950 IPR006036 Potassium uptake protein TrkA E3384_01950 IPR038770 Sodium/solute symporter superfamily E3384_01950 IPR006153 Cation/H+ exchanger E3384_01955 IPR012658 Conserved hypothetical protein CHP02443 E3384_01960 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain E3384_01965 IPR007236 SlyX E3384_01970 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal E3384_01970 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily E3384_01970 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain E3384_01975 IPR039446 Transcriptional regulator DauR-like E3384_01975 IPR039445 Transcriptional regulator DauR-like, HTH domain E3384_01975 IPR013559 YheO-like E3384_01980 IPR027396 DsrEFH-like E3384_01980 IPR003787 Sulphur relay, DsrE/F-like protein E3384_01980 IPR017463 Sulphur relay, TusD/DsrE E3384_01985 IPR017462 Sulphur relay, TusC/DsrF E3384_01985 IPR037450 Sulphur relay, TusC E3384_01985 IPR027396 DsrEFH-like E3384_01985 IPR003787 Sulphur relay, DsrE/F-like protein E3384_01990 IPR007215 Sulphur relay, TusB/DsrH E3384_01990 IPR027396 DsrEFH-like E3384_01990 IPR023526 Sulphur relay, TusB E3384_01995 IPR012340 Nucleic acid-binding, OB-fold E3384_01995 IPR006032 Ribosomal protein S12/S23 E3384_01995 IPR005679 Ribosomal protein S12, bacterial-type E3384_02000 IPR023798 Ribosomal protein S7 domain E3384_02000 IPR005717 Ribosomal protein S7, bacterial/organellar-type E3384_02000 IPR020606 Ribosomal protein S7, conserved site E3384_02000 IPR036823 Ribosomal protein S7 domain superfamily E3384_02000 IPR000235 Ribosomal protein S5/S7 E3384_02005 IPR031157 Tr-type G domain, conserved site E3384_02005 IPR009022 Elongation factor G, domain III E3384_02005 IPR004161 Translation elongation factor EFTu-like, domain 2 E3384_02005 IPR035647 EF-G domain III/V-like E3384_02005 IPR035649 EFG, domain V E3384_02005 IPR041095 Elongation Factor G, domain II E3384_02005 IPR004540 Translation elongation factor EFG/EF2 E3384_02005 IPR005517 Translation elongation factor EFG/EF2, domain IV E3384_02005 IPR000795 Transcription factor, GTP-binding domain E3384_02005 IPR005225 Small GTP-binding protein domain E3384_02005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_02005 IPR000640 Elongation factor EFG, domain V-like E3384_02005 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_02005 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_02005 IPR009000 Translation protein, beta-barrel domain superfamily E3384_02010 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal E3384_02010 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal E3384_02010 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle E3384_02010 IPR009000 Translation protein, beta-barrel domain superfamily E3384_02010 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain E3384_02010 IPR005225 Small GTP-binding protein domain E3384_02010 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_02010 IPR031157 Tr-type G domain, conserved site E3384_02010 IPR033720 Elongation factor Tu, domain 2 E3384_02010 IPR004161 Translation elongation factor EFTu-like, domain 2 E3384_02010 IPR000795 Transcription factor, GTP-binding domain E3384_02015 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily E3384_02015 IPR007419 BFD-like [2Fe-2S]-binding domain E3384_02020 IPR009078 Ferritin-like superfamily E3384_02020 IPR008331 Ferritin/DPS protein domain E3384_02020 IPR009040 Ferritin-like diiron domain E3384_02020 IPR012347 Ferritin-like E3384_02020 IPR002024 Bacterioferritin E3384_02025 IPR000045 Prepilin type IV endopeptidase, peptidase domain E3384_02025 IPR014032 Peptidase A24A, prepilin type IV, bacterial E3384_02030 IPR018268 Ribosomal protein S10, conserved site E3384_02030 IPR001848 Ribosomal protein S10 E3384_02030 IPR027486 Ribosomal protein S10 domain E3384_02030 IPR036838 Ribosomal protein S10 domain superfamily E3384_02035 IPR009000 Translation protein, beta-barrel domain superfamily E3384_02035 IPR000597 Ribosomal protein L3 E3384_02035 IPR019927 Ribosomal protein L3, bacterial/organelle-type E3384_02035 IPR019926 Ribosomal protein L3, conserved site E3384_02040 IPR013005 50S ribosomal protein uL4 E3384_02040 IPR023574 Ribosomal protein L4 domain superfamily E3384_02040 IPR002136 Ribosomal protein L4/L1e E3384_02045 IPR001014 Ribosomal protein L23/L25, conserved site E3384_02045 IPR012678 Ribosomal protein L23/L15e core domain superfamily E3384_02045 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily E3384_02045 IPR013025 Ribosomal protein L25/L23 E3384_02050 IPR014726 Ribosomal protein L2, domain 3 E3384_02050 IPR008991 Translation protein SH3-like domain superfamily E3384_02050 IPR022669 Ribosomal protein L2, C-terminal E3384_02050 IPR005880 Ribosomal protein L2, bacterial/organellar-type E3384_02050 IPR002171 Ribosomal protein L2 E3384_02050 IPR022671 Ribosomal protein L2, conserved site E3384_02050 IPR014722 Ribosomal protein L2, domain 2 E3384_02050 IPR022666 Ribosomal Proteins L2, RNA binding domain E3384_02050 IPR012340 Nucleic acid-binding, OB-fold E3384_02055 IPR002222 Ribosomal protein S19/S15 E3384_02055 IPR005732 Ribosomal protein S19, bacterial-type E3384_02055 IPR023575 Ribosomal protein S19, superfamily E3384_02055 IPR020934 Ribosomal protein S19 conserved site E3384_02060 IPR018260 Ribosomal protein L22/L17, conserved site E3384_02060 IPR036394 Ribosomal protein L22/L17 superfamily E3384_02060 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type E3384_02060 IPR001063 Ribosomal protein L22/L17 E3384_02065 IPR004087 K Homology domain E3384_02065 IPR018280 Ribosomal protein S3, conserved site E3384_02065 IPR036419 Ribosomal protein S3, C-terminal domain superfamily E3384_02065 IPR001351 Ribosomal protein S3, C-terminal E3384_02065 IPR005704 Ribosomal protein S3, bacterial-type E3384_02065 IPR009019 K homology domain superfamily, prokaryotic type E3384_02065 IPR004044 K Homology domain, type 2 E3384_02065 IPR015946 K homology domain-like, alpha/beta E3384_02070 IPR036920 Ribosomal protein L10e/L16 superfamily E3384_02070 IPR016180 Ribosomal protein L10e/L16 E3384_02070 IPR020798 Ribosomal protein L16, conserved site E3384_02070 IPR000114 Ribosomal protein L16 E3384_02075 IPR036049 Ribosomal protein L29/L35 superfamily E3384_02075 IPR001854 Ribosomal protein L29/L35 E3384_02075 IPR018254 Ribosomal protein L29, conserved site E3384_02080 IPR000266 Ribosomal protein S17/S11 E3384_02080 IPR019984 30S ribosomal protein S17 E3384_02080 IPR019979 Ribosomal protein S17, conserved site E3384_02080 IPR012340 Nucleic acid-binding, OB-fold E3384_02085 IPR005745 Ribosomal protein L14P, bacterial-type E3384_02085 IPR000218 Ribosomal protein L14P E3384_02085 IPR036853 Ribosomal protein L14 superfamily E3384_02085 IPR019972 Ribosomal protein L14P, conserved site E3384_02090 IPR003256 Ribosomal protein L24 E3384_02090 IPR005825 Ribosomal protein L24/L26, conserved site E3384_02090 IPR041988 Ribosomal Protein L26/L24, KOW domain E3384_02090 IPR005824 KOW E3384_02090 IPR008991 Translation protein SH3-like domain superfamily E3384_02090 IPR014722 Ribosomal protein L2, domain 2 E3384_02095 IPR002132 Ribosomal protein L5 E3384_02095 IPR020929 Ribosomal protein L5, conserved site E3384_02095 IPR020930 Ribosomal protein L5, bacterial-type E3384_02095 IPR031309 Ribosomal protein L5, C-terminal E3384_02095 IPR022803 Ribosomal protein L5 domain superfamily E3384_02095 IPR031310 Ribosomal protein L5, N-terminal E3384_02100 IPR018271 Ribosomal protein S14, conserved site E3384_02100 IPR023036 Ribosomal protein S14, bacterial/plastid E3384_02100 IPR001209 Ribosomal protein S14 E3384_02105 IPR000630 Ribosomal protein S8 E3384_02105 IPR035987 Ribosomal protein S8 superfamily E3384_02110 IPR000702 Ribosomal protein L6 E3384_02110 IPR020040 Ribosomal protein L6, alpha-beta domain E3384_02110 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily E3384_02110 IPR019906 Ribosomal protein L6, bacterial-type E3384_02110 IPR002358 Ribosomal protein L6, conserved site E3384_02115 IPR004389 Ribosomal protein L18, bacterial-type E3384_02115 IPR005484 Ribosomal protein L18 E3384_02120 IPR018192 Ribosomal protein S5, N-terminal, conserved site E3384_02120 IPR000851 Ribosomal protein S5 E3384_02120 IPR005712 Ribosomal protein S5, bacterial-type E3384_02120 IPR005324 Ribosomal protein S5, C-terminal E3384_02120 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_02120 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_02120 IPR013810 Ribosomal protein S5, N-terminal E3384_02125 IPR018038 Ribosomal protein L30, conserved site E3384_02125 IPR005996 Ribosomal protein L30, bacterial-type E3384_02125 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain E3384_02125 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily E3384_02130 IPR036227 Ribosomal L18e/L15P superfamily E3384_02130 IPR001196 Ribosomal protein L15, conserved site E3384_02130 IPR005749 Ribosomal protein L15, bacterial-type E3384_02130 IPR030878 Ribosomal protein L15 E3384_02130 IPR021131 Ribosomal protein L18e/L15P E3384_02135 IPR002208 SecY/SEC61-alpha family E3384_02135 IPR026593 Protein translocase subunit SecY E3384_02135 IPR030659 SecY conserved site E3384_02135 IPR023201 SecY domain superfamily E3384_02140 IPR035977 Ribosomal protein L36 superfamily E3384_02140 IPR000473 Ribosomal protein L36 E3384_02145 IPR001892 Ribosomal protein S13 E3384_02145 IPR018269 Ribosomal protein S13, conserved site E3384_02145 IPR027437 30s ribosomal protein S13, C-terminal E3384_02145 IPR019980 Ribosomal protein S13, bacterial-type E3384_02145 IPR010979 Ribosomal protein S13-like, H2TH E3384_02150 IPR036967 Ribosomal protein S11 superfamily E3384_02150 IPR018102 Ribosomal S11, conserved site E3384_02150 IPR001971 Ribosomal protein S11 E3384_02150 IPR019981 Ribosomal protein S11, bacterial-type E3384_02155 IPR002942 RNA-binding S4 domain E3384_02155 IPR018079 Ribosomal protein S4, conserved site E3384_02155 IPR036986 RNA-binding S4 domain superfamily E3384_02155 IPR005709 Ribosomal protein S4, bacterial-type E3384_02155 IPR001912 Ribosomal protein S4/S9, N-terminal E3384_02155 IPR022801 Ribosomal protein S4/S9 E3384_02160 IPR011262 DNA-directed RNA polymerase, insert domain E3384_02160 IPR036643 DNA-directed RNA polymerase, insert domain superfamily E3384_02160 IPR011773 DNA-directed RNA polymerase, alpha subunit E3384_02160 IPR036603 RNA polymerase, RBP11-like subunit E3384_02160 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type E3384_02160 IPR011260 RNA polymerase, alpha subunit, C-terminal E3384_02165 IPR000456 Ribosomal protein L17 E3384_02165 IPR036373 Ribosomal protein L17 superfamily E3384_02170 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain E3384_02175 IPR009061 Putative DNA-binding domain superfamily E3384_02175 IPR011788 Zn(II)-responsive transcriptional regulator E3384_02175 IPR000551 MerR-type HTH domain E3384_02180 IPR005589 Alternative ribosome-rescue factor A E3384_02185 IPR019823 Large-conductance mechanosensitive channel, conserved site E3384_02185 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L E3384_02185 IPR036019 Gated mechanosensitive channel E3384_02185 IPR001185 Large-conductance mechanosensitive channel E3384_02190 IPR006036 Potassium uptake protein TrkA E3384_02190 IPR036291 NAD(P)-binding domain superfamily E3384_02190 IPR006037 Regulator of K+ conductance, C-terminal E3384_02190 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily E3384_02190 IPR003148 Regulator of K+ conductance, N-terminal E3384_02195 IPR006027 NusB/RsmB/TIM44 E3384_02195 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type E3384_02195 IPR023267 RNA (C5-cytosine) methyltransferase E3384_02195 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site E3384_02195 IPR004573 rRNA small subunit methyltransferase B E3384_02195 IPR035926 NusB-like superfamily E3384_02195 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae E3384_02195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_02200 IPR002376 Formyl transferase, N-terminal E3384_02200 IPR036477 Formyl transferase, N-terminal domain superfamily E3384_02200 IPR005794 Methionyl-tRNA formyltransferase E3384_02200 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain E3384_02200 IPR005793 Formyl transferase, C-terminal E3384_02200 IPR037022 Formyl transferase, C-terminal domain superfamily E3384_02200 IPR011034 Formyl transferase-like, C-terminal domain superfamily E3384_02200 IPR001555 Phosphoribosylglycinamide formyltransferase, active site E3384_02205 IPR036821 Peptide deformylase superfamily E3384_02205 IPR023635 Peptide deformylase E3384_02210 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_02210 IPR003488 DNA recombination-mediator protein A E3384_02210 IPR041614 DprA, winged helix domain E3384_02215 IPR007456 Smg E3384_02220 IPR000380 DNA topoisomerase, type IA E3384_02220 IPR013498 DNA topoisomerase, type IA, zn finger E3384_02225 IPR023535 Threonylcarbamoyl-AMP synthase E3384_02225 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily E3384_02225 IPR006070 YrdC-like domain E3384_02230 IPR011342 Shikimate dehydrogenase E3384_02230 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal E3384_02230 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase E3384_02230 IPR041121 SDH, C-terminal E3384_02230 IPR022893 Shikimate dehydrogenase family E3384_02230 IPR036291 NAD(P)-binding domain superfamily E3384_02235 IPR009962 Protein of unknown function DUF1488 E3384_02235 IPR036692 Shew3726-like superfamily E3384_02240 IPR011004 Trimeric LpxA-like superfamily E3384_02240 IPR001451 Hexapeptide repeat E3384_02280 IPR001036 Acriflavin resistance protein E3384_02280 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains E3384_02280 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 E3384_02285 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain E3384_02285 IPR006143 RND efflux pump, membrane fusion protein E3384_02290 IPR013572 Transcription regulator MAATS, C-terminal E3384_02290 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_02290 IPR001647 DNA-binding HTH domain, TetR-type E3384_02290 IPR009057 Homeobox-like domain superfamily E3384_02290 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E3384_02295 IPR001633 EAL domain E3384_02295 IPR035919 EAL domain superfamily E3384_02295 IPR000160 GGDEF domain E3384_02295 IPR005330 MHYT domain E3384_02295 IPR029787 Nucleotide cyclase E3384_02300 IPR022540 Protein of unknown function DUF2556 E3384_02305 IPR001091 Restriction/modification DNA-methylase E3384_02305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_02305 IPR002941 DNA methylase N-4/N-6 E3384_02305 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_02310 IPR005412 DNA-binding protein Fis E3384_02310 IPR002197 DNA binding HTH domain, Fis-type E3384_02310 IPR009057 Homeobox-like domain superfamily E3384_02315 IPR018517 tRNA-dihydrouridine synthase, conserved site E3384_02315 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 E3384_02315 IPR032887 tRNA-dihydrouridine synthase B E3384_02315 IPR013785 Aldolase-type TIM barrel E3384_02315 IPR035587 DUS-like, FMN-binding domain E3384_02315 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal E3384_02315 IPR001269 tRNA-dihydrouridine synthase E3384_02325 IPR004498 Ribosomal protein L11 methyltransferase E3384_02325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_02330 IPR018212 Sodium/solute symporter, conserved site E3384_02330 IPR001734 Sodium/solute symporter E3384_02330 IPR011849 Sodium/pantothenate symporter E3384_02330 IPR038377 Sodium/glucose symporter superfamily E3384_02335 IPR010398 Protein of unknown function DUF997 E3384_02340 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain E3384_02340 IPR011054 Rudiment single hybrid motif E3384_02340 IPR016185 Pre-ATP-grasp domain superfamily E3384_02340 IPR005482 Biotin carboxylase, C-terminal E3384_02340 IPR005481 Biotin carboxylase-like, N-terminal domain E3384_02340 IPR013815 ATP-grasp fold, subdomain 1 E3384_02340 IPR011761 ATP-grasp fold E3384_02340 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase E3384_02340 IPR011764 Biotin carboxylation domain E3384_02345 IPR001249 Acetyl-CoA biotin carboxyl carrier E3384_02345 IPR001882 Biotin-binding site E3384_02345 IPR000089 Biotin/lipoyl attachment E3384_02345 IPR011053 Single hybrid motif E3384_02350 IPR013130 Ferric reductase transmembrane component-like domain E3384_02350 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ E3384_02355 IPR000572 Oxidoreductase, molybdopterin-binding domain E3384_02355 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP E3384_02355 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_02355 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily E3384_02360 IPR020843 Polyketide synthase, enoylreductase domain E3384_02360 IPR036291 NAD(P)-binding domain superfamily E3384_02360 IPR014188 Acrylyl-CoA reductase AcuI E3384_02360 IPR011032 GroES-like superfamily E3384_02360 IPR013154 Alcohol dehydrogenase, N-terminal E3384_02360 IPR013149 Alcohol dehydrogenase, C-terminal E3384_02365 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 E3384_02365 IPR000160 GGDEF domain E3384_02365 IPR001633 EAL domain E3384_02365 IPR035919 EAL domain superfamily E3384_02365 IPR029787 Nucleotide cyclase E3384_02370 IPR004753 Cell shape determining protein MreB E3384_02375 IPR007221 Rod shape-determining protein MreC E3384_02375 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 E3384_02375 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 E3384_02380 IPR007227 Cell shape-determining protein MreD E3384_02380 IPR026034 Cell shape-determining protein MreD, proteobacterial type E3384_02385 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein E3384_02385 IPR029001 Inosine triphosphate pyrophosphatase-like E3384_02390 IPR004659 Ribonuclease E/G E3384_02390 IPR012340 Nucleic acid-binding, OB-fold E3384_02390 IPR022967 RNA-binding domain, S1 E3384_02390 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G E3384_02390 IPR003029 S1 domain E3384_02395 IPR025263 Domain of unknown function DUF3971 E3384_02395 IPR011836 Conserved hypothetical protein CHP02099 E3384_02395 IPR032712 AsmA-like, C-terminal E3384_02400 IPR036059 Metalloprotease TldD/PmbA superfamily E3384_02400 IPR002510 Metalloprotease TldD/PmbA E3384_02400 IPR025502 TldD E3384_02400 IPR035068 Metalloprotease TldD/PmbA, N-terminal E3384_02405 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_02405 IPR036390 Winged helix DNA-binding domain superfamily E3384_02405 IPR000847 Transcription regulator HTH, LysR E3384_02405 IPR005119 LysR, substrate-binding E3384_02410 IPR012451 Protein of unknown function DUF1656 E3384_02415 IPR039562 Membrane fusion protein, biotin-lipoyl like domain E3384_02415 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA E3384_02415 IPR006143 RND efflux pump, membrane fusion protein E3384_02420 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB E3384_02420 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein E3384_02425 IPR035905 Barstar-like superfamily E3384_02425 IPR000468 Barstar (barnase inhibitor) E3384_02430 IPR025543 Dodecin-like E3384_02430 IPR036275 YdgH-like superfamily E3384_02430 IPR010854 Domain of unknown function DUF1471 E3384_02435 IPR025543 Dodecin-like E3384_02435 IPR010854 Domain of unknown function DUF1471 E3384_02435 IPR036275 YdgH-like superfamily E3384_02440 IPR036251 Arginine repressor, C-terminal domain superfamily E3384_02440 IPR020900 Arginine repressor, DNA-binding domain E3384_02440 IPR020899 Arginine repressor, C-terminal E3384_02440 IPR001669 Arginine repressor E3384_02440 IPR036390 Winged helix DNA-binding domain superfamily E3384_02440 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_02445 IPR022383 Lactate/malate dehydrogenase, C-terminal E3384_02445 IPR036291 NAD(P)-binding domain superfamily E3384_02445 IPR001557 L-lactate/malate dehydrogenase E3384_02445 IPR023958 Malate dehydrogenase, type 1, bacterial E3384_02445 IPR001236 Lactate/malate dehydrogenase, N-terminal E3384_02445 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal E3384_02445 IPR001252 Malate dehydrogenase, active site E3384_02445 IPR010097 Malate dehydrogenase, type 1 E3384_02460 IPR031312 Sodium/sulphate symporter, conserved site E3384_02460 IPR001898 Solute carrier family 13 E3384_02465 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain E3384_02470 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily E3384_02470 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain E3384_02475 IPR023424 Oxaloacetate decarboxylase gamma chain, probable E3384_02475 IPR005899 Sodium ion-translocating decarboxylase E3384_02480 IPR011053 Single hybrid motif E3384_02480 IPR005776 Oxaloacetate decarboxylase, alpha subunit E3384_02480 IPR003379 Carboxylase, conserved domain E3384_02480 IPR000089 Biotin/lipoyl attachment E3384_02480 IPR001882 Biotin-binding site E3384_02480 IPR013785 Aldolase-type TIM barrel E3384_02480 IPR000891 Pyruvate carboxyltransferase E3384_02485 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit E3384_02490 IPR002736 Triphosphoribosyl-dephospho-CoA protein E3384_02490 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG E3384_02495 IPR001478 PDZ domain E3384_02495 IPR036034 PDZ superfamily E3384_02495 IPR011783 Peptidase S1C, DegS E3384_02495 IPR009003 Peptidase S1, PA clan E3384_02495 IPR001940 Peptidase S1C E3384_02500 IPR001940 Peptidase S1C E3384_02500 IPR009003 Peptidase S1, PA clan E3384_02500 IPR011782 Peptidase S1C, Do E3384_02500 IPR036034 PDZ superfamily E3384_02500 IPR001478 PDZ domain E3384_02505 IPR009386 Protein of unknown function DUF1043 E3384_02510 IPR030870 Cell division protein ZapE E3384_02510 IPR005654 ATPase, AFG1-like E3384_02510 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_02515 IPR036899 Ribosomal protein L13 superfamily E3384_02515 IPR005822 Ribosomal protein L13 E3384_02515 IPR023563 Ribosomal protein L13, conserved site E3384_02515 IPR005823 Ribosomal protein L13, bacterial-type E3384_02520 IPR020574 Ribosomal protein S9, conserved site E3384_02520 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_02520 IPR023035 Ribosomal protein S9, bacterial/plastid E3384_02520 IPR000754 Ribosomal protein S9 E3384_02520 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_02535 IPR010987 Glutathione S-transferase, C-terminal-like E3384_02535 IPR040079 Glutathione Transferase family E3384_02535 IPR004045 Glutathione S-transferase, N-terminal E3384_02535 IPR004046 Glutathione S-transferase, C-terminal E3384_02535 IPR036282 Glutathione S-transferase, C-terminal domain superfamily E3384_02535 IPR034341 Stringent starvation protein A, N-terminal E3384_02535 IPR036249 Thioredoxin-like superfamily E3384_02540 IPR007481 Stringent starvation protein B E3384_02540 IPR036760 SspB-like superfamily E3384_02545 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_02545 IPR011711 GntR, C-terminal E3384_02545 IPR036390 Winged helix DNA-binding domain superfamily E3384_02545 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_02545 IPR023730 HTH-type transcriptional repressor NanR E3384_02545 IPR000524 Transcription regulator HTH, GntR E3384_02550 IPR013785 Aldolase-type TIM barrel E3384_02550 IPR002220 DapA-like E3384_02550 IPR005264 N-acetylneuraminate lyase E3384_02550 IPR020625 Schiff base-forming aldolase, active site E3384_02550 IPR020624 Schiff base-forming aldolase, conserved site E3384_02555 IPR011701 Major facilitator superfamily E3384_02555 IPR036259 MFS transporter superfamily E3384_02555 IPR020846 Major facilitator superfamily domain E3384_02555 IPR004742 Sialic acid transporter E3384_02560 IPR013785 Aldolase-type TIM barrel E3384_02560 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase E3384_02560 IPR011060 Ribulose-phosphate binding barrel E3384_02565 IPR000600 ROK family E3384_02565 IPR023945 N-acetylmannosamine kinase, bacterial E3384_02570 IPR037012 YhcH/YjgK/YiaL superfamily E3384_02570 IPR004375 YhcH/YjgK/YiaL family E3384_02575 IPR032466 Metal-dependent hydrolase E3384_02575 IPR011059 Metal-dependent hydrolase, composite domain superfamily E3384_02575 IPR013108 Amidohydrolase 3 E3384_02580 IPR030191 Cytosine permease E3384_02580 IPR038271 Purine-cytosine permease superfamily E3384_02580 IPR001248 Purine-cytosine permease E3384_02585 IPR041527 YhcG, N-terminal E3384_02585 IPR009362 YhcG PDDEXK nuclease domain E3384_02590 IPR028261 Dihydroprymidine dehydrogenase domain II E3384_02590 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_02590 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_02590 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 E3384_02590 IPR009051 Alpha-helical ferredoxin E3384_02590 IPR023753 FAD/NAD(P)-binding domain E3384_02595 IPR013785 Aldolase-type TIM barrel E3384_02595 IPR017932 Glutamine amidotransferase type 2 domain E3384_02595 IPR002489 Glutamate synthase, alpha subunit, C-terminal E3384_02595 IPR006982 Glutamate synthase, central-N E3384_02595 IPR002932 Glutamate synthase domain E3384_02595 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily E3384_02595 IPR029055 Nucleophile aminohydrolases, N-terminal E3384_02600 IPR005911 Protein YhcC-like E3384_02600 IPR039661 ELP3/YhcC E3384_02600 IPR023404 Radical SAM, alpha/beta horseshoe E3384_02600 IPR006638 Elp3/MiaB/NifB E3384_02600 IPR032432 Radical SAM, C-terminal extension E3384_02600 IPR007197 Radical SAM E3384_02605 IPR011006 CheY-like superfamily E3384_02605 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily E3384_02605 IPR040642 Histidine kinase receptor ArcB, transmembrane domain E3384_02605 IPR001789 Signal transduction response regulator, receiver domain E3384_02605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_02605 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain E3384_02605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_02605 IPR035965 PAS domain superfamily E3384_02605 IPR005467 Histidine kinase domain E3384_02605 IPR013767 PAS fold E3384_02605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_02605 IPR036641 HPT domain superfamily E3384_02605 IPR000700 PAS-associated, C-terminal E3384_02605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_02605 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB E3384_02605 IPR003594 Histidine kinase/HSP90-like ATPase E3384_02605 IPR000014 PAS domain E3384_02610 IPR029062 Class I glutamine amidotransferase-like E3384_02610 IPR026041 Glyoxalase ElbB E3384_02615 IPR011812 Biosynthetic peptidoglycan transglycosylase E3384_02615 IPR036950 Penicillin binding protein transglycosylase domain E3384_02615 IPR023346 Lysozyme-like domain superfamily E3384_02615 IPR001264 Glycosyl transferase, family 51 E3384_02620 IPR011009 Protein kinase-like domain superfamily E3384_02620 IPR019647 PhoP regulatory network protein YrbL E3384_02625 IPR002114 Phosphotransferase system, HPr serine phosphorylation site E3384_02625 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site E3384_02625 IPR035895 HPr-like superfamily E3384_02625 IPR000032 Phosphocarrier protein HPr-like E3384_02630 IPR005337 RapZ-like family E3384_02630 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_02635 IPR016152 Phosphotransferase/anion transporter E3384_02635 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN E3384_02635 IPR002178 PTS EIIA type-2 domain E3384_02640 IPR003489 Ribosome hibernation promoting factor/RaiA E3384_02640 IPR036567 Ribosome hibernation promotion factor-like E3384_02645 IPR000394 RNA polymerase sigma factor 54 E3384_02645 IPR007046 RNA polymerase sigma factor 54, core-binding domain E3384_02645 IPR007634 RNA polymerase sigma factor 54, DNA-binding E3384_02645 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily E3384_02650 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_02650 IPR030921 LPS export ABC transporter, ATP-binding protein LptB E3384_02650 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal E3384_02650 IPR017871 ABC transporter, conserved site E3384_02650 IPR003439 ABC transporter-like E3384_02650 IPR003593 AAA+ ATPase domain E3384_02655 IPR005653 Organic solvent tolerance-like, N-terminal E3384_02655 IPR014340 Lipopolysaccharide export system protein LptA E3384_02660 IPR010664 Lipopolysaccharide assembly, LptC-related E3384_02660 IPR026265 Lipopolysaccharide export system protein LptC E3384_02665 IPR010023 KdsC family E3384_02665 IPR023214 HAD superfamily E3384_02665 IPR036412 HAD-like superfamily E3384_02670 IPR000644 CBS domain E3384_02670 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type E3384_02670 IPR035474 KpsF-like, SIS domain E3384_02670 IPR001347 Sugar isomerase (SIS) E3384_02675 IPR004481 Sodium/potassium/calcium exchanger E3384_02675 IPR004837 Sodium/calcium exchanger membrane region E3384_02680 IPR003593 AAA+ ATPase domain E3384_02680 IPR017871 ABC transporter, conserved site E3384_02680 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl E3384_02680 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_02680 IPR003439 ABC transporter-like E3384_02685 IPR003453 ABC transport permease subunit MlaE, Proteobacteria E3384_02685 IPR030802 ABC transporter permease MalE E3384_02690 IPR003399 Mce/MlaD E3384_02690 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD E3384_02695 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC E3384_02695 IPR042245 Tgt2/MlaC superfamily E3384_02700 IPR036513 STAS domain superfamily E3384_02700 IPR002645 STAS domain E3384_02705 IPR036065 BolA-like superfamily E3384_02705 IPR002634 BolA protein E3384_02710 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta E3384_02710 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase E3384_02710 IPR036968 Enolpyruvate transferase domain superfamily E3384_02710 IPR001986 Enolpyruvate transferase domain E3384_02715 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_02715 IPR038722 Ner, winged helix-turn-helix DNA-binding domain E3384_02720 IPR000092 Polyprenyl synthetase E3384_02720 IPR008949 Isoprenoid synthase domain superfamily E3384_02720 IPR033749 Polyprenyl synthetase, conserved site E3384_02725 IPR018258 Ribosomal protein L21, conserved site E3384_02725 IPR001787 Ribosomal protein L21 E3384_02725 IPR028909 Ribosomal protein L21-like E3384_02725 IPR036164 L21-like superfamily E3384_02730 IPR001684 Ribosomal protein L27 E3384_02730 IPR018261 Ribosomal protein L27, conserved site E3384_02735 IPR000620 EamA domain E3384_02740 IPR031167 OBG-type guanine nucleotide-binding (G) domain E3384_02740 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_02740 IPR006073 GTP binding domain E3384_02740 IPR036726 GTP1/OBG domain superfamily E3384_02740 IPR006169 GTP1/OBG domain E3384_02740 IPR006074 GTP1/OBG, conserved site E3384_02740 IPR035101 GTP-binding protein, Obg-type E3384_02740 IPR014100 GTP-binding protein Obg/CgtA E3384_02745 IPR012338 Beta-lactamase/transpeptidase-like E3384_02745 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C E3384_02750 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal E3384_02750 IPR023459 Transcription elongation factor GreA/GreB family E3384_02750 IPR028624 Transcription elongation factor GreA/GreB E3384_02750 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily E3384_02750 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal E3384_02750 IPR006359 Transcription elongation factor GreA E3384_02750 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily E3384_02750 IPR018151 Transcription elongation factor, GreA/GreB, conserved site E3384_02755 IPR001890 RNA-binding, CRM domain E3384_02755 IPR017924 RNA-binding protein YhbY E3384_02755 IPR035920 YhbY-like superfamily E3384_02760 IPR002877 Ribosomal RNA methyltransferase FtsJ domain E3384_02760 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria E3384_02760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_02760 IPR015507 Ribosomal RNA large subunit methyltransferase E E3384_02765 IPR003959 ATPase, AAA-type, core E3384_02765 IPR041569 AAA ATPase, AAA+ lid domain E3384_02765 IPR003593 AAA+ ATPase domain E3384_02765 IPR011546 Peptidase M41, FtsH extracellular E3384_02765 IPR003960 ATPase, AAA-type, conserved site E3384_02765 IPR000642 Peptidase M41 E3384_02765 IPR037219 Peptidase M41-like E3384_02765 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_02765 IPR005936 Peptidase, FtsH E3384_02770 IPR006390 Dihydropteroate synthase E3384_02770 IPR011005 Dihydropteroate synthase-like E3384_02770 IPR000489 Pterin-binding domain E3384_02775 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily E3384_02775 IPR006352 Phosphoglucosamine mutase, bacterial type E3384_02775 IPR016066 Alpha-D-phosphohexomutase, conserved site E3384_02775 IPR005841 Alpha-D-phosphohexomutase superfamily E3384_02775 IPR005843 Alpha-D-phosphohexomutase, C-terminal E3384_02775 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I E3384_02775 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III E3384_02775 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II E3384_02775 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III E3384_02780 IPR004692 Preprotein translocase SecG subunit E3384_02795 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail E3384_02795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_02795 IPR001518 Argininosuccinate synthase E3384_02795 IPR018223 Argininosuccinate synthase, conserved site E3384_02795 IPR023437 Argininosuccinate synthase, type 2 subfamily E3384_02795 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body E3384_02805 IPR003728 Ribosome maturation factor RimP E3384_02805 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily E3384_02805 IPR028998 Ribosome maturation factor RimP, C-terminal E3384_02805 IPR035956 RimP, N-terminal domain superfamily E3384_02805 IPR028989 Ribosome maturation factor RimP, N-terminal E3384_02810 IPR036555 NusA, N-terminal domain superfamily E3384_02810 IPR015946 K homology domain-like, alpha/beta E3384_02810 IPR022967 RNA-binding domain, S1 E3384_02810 IPR030842 Transcription termination/antitermination protein NusA, bacterial E3384_02810 IPR010214 Transcription termination factor NusA, C-terminal duplication E3384_02810 IPR010213 Transcription termination factor NusA E3384_02810 IPR013735 Transcription factor NusA, N-terminal E3384_02810 IPR003029 S1 domain E3384_02810 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical E3384_02810 IPR004087 K Homology domain E3384_02810 IPR025249 KH domain, NusA-like E3384_02810 IPR009019 K homology domain superfamily, prokaryotic type E3384_02810 IPR012340 Nucleic acid-binding, OB-fold E3384_02815 IPR015760 Translation initiation factor IF- 2 E3384_02815 IPR000178 Translation initiation factor aIF-2, bacterial-like E3384_02815 IPR000795 Transcription factor, GTP-binding domain E3384_02815 IPR005225 Small GTP-binding protein domain E3384_02815 IPR006847 Translation initiation factor IF-2, N-terminal E3384_02815 IPR009000 Translation protein, beta-barrel domain superfamily E3384_02815 IPR023115 Translation initiation factor IF- 2, domain 3 E3384_02815 IPR009061 Putative DNA-binding domain superfamily E3384_02815 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_02815 IPR013575 Initiation factor 2 associated domain, bacterial E3384_02815 IPR036925 Translation initiation factor IF-2, domain 3 superfamily E3384_02820 IPR020053 Ribosome-binding factor A, conserved site E3384_02820 IPR015946 K homology domain-like, alpha/beta E3384_02820 IPR000238 Ribosome-binding factor A E3384_02820 IPR023799 Ribosome-binding factor A domain superfamily E3384_02825 IPR015947 PUA-like superfamily E3384_02825 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_02825 IPR014780 tRNA pseudouridine synthase II, TruB E3384_02825 IPR032819 tRNA pseudouridylate synthase B, C-terminal E3384_02825 IPR036974 PUA domain superfamily E3384_02825 IPR002501 Pseudouridine synthase II, N-terminal E3384_02825 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal E3384_02830 IPR005290 Ribosomal protein S15, bacterial-type E3384_02830 IPR000589 Ribosomal protein S15 E3384_02830 IPR009068 S15/NS1, RNA-binding E3384_02835 IPR027408 PNPase/RNase PH domain superfamily E3384_02835 IPR004087 K Homology domain E3384_02835 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily E3384_02835 IPR004088 K Homology domain, type 1 E3384_02835 IPR036345 Exoribonuclease, PH domain 2 superfamily E3384_02835 IPR036612 K Homology domain, type 1 superfamily E3384_02835 IPR003029 S1 domain E3384_02835 IPR012340 Nucleic acid-binding, OB-fold E3384_02835 IPR001247 Exoribonuclease, phosphorolytic domain 1 E3384_02835 IPR022967 RNA-binding domain, S1 E3384_02835 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_02835 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain E3384_02835 IPR012162 Polyribonucleotide nucleotidyltransferase E3384_02835 IPR015847 Exoribonuclease, phosphorolytic domain 2 E3384_02840 IPR023605 Lipoprotein NlpI E3384_02840 IPR013026 Tetratricopeptide repeat-containing domain E3384_02840 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_02840 IPR013105 Tetratricopeptide repeat 2 E3384_02840 IPR019734 Tetratricopeptide repeat E3384_02850 IPR021046 Cold-shock protein, DEAD box A, C-terminal E3384_02850 IPR028618 ATP-dependent RNA helicase DeaD E3384_02850 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_02850 IPR034415 CsdA, RNA recognition motif E3384_02850 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain E3384_02850 IPR001650 Helicase, C-terminal E3384_02850 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily E3384_02850 IPR011545 DEAD/DEAH box helicase domain E3384_02850 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_02850 IPR014014 RNA helicase, DEAD-box type, Q motif E3384_02850 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site E3384_02855 IPR013061 Tryptophan/tryrosine permease, conserved site E3384_02855 IPR018227 Amino acid/polyamine transporter 2 E3384_02855 IPR013059 Tryptophan/tyrosine transporter E3384_02865 IPR005490 L,D-transpeptidase catalytic domain E3384_02865 IPR038063 L,D-transpeptidase catalytic domain-like E3384_02870 IPR019949 Luciferase family oxidoreductase, group 1 E3384_02870 IPR011251 Luciferase-like domain E3384_02870 IPR036661 Luciferase-like domain superfamily E3384_02890 IPR016181 Acyl-CoA N-acyltransferase E3384_02890 IPR000182 GNAT domain E3384_02895 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease E3384_02895 IPR035901 GIY-YIG endonuclease superfamily E3384_02895 IPR000305 GIY-YIG endonuclease E3384_02900 IPR012349 FMN-binding split barrel E3384_02900 IPR011194 Uncharacterised protein family UPF0306 E3384_02905 IPR029062 Class I glutamine amidotransferase-like E3384_02905 IPR002818 DJ-1/PfpI E3384_02905 IPR006286 Deglycase PfpI E3384_02910 IPR000534 Semialdehyde dehydrogenase, NAD-binding E3384_02910 IPR036291 NAD(P)-binding domain superfamily E3384_02910 IPR016040 NAD(P)-binding domain E3384_02915 IPR014004 Transport-associated and nodulation domain, bacteria E3384_02915 IPR007055 BON domain E3384_02920 IPR035461 GmhA/DiaA E3384_02920 IPR023070 DnaA initiator-associating protein E3384_02920 IPR001347 Sugar isomerase (SIS) E3384_02925 IPR011856 tRNA endonuclease-like domain superfamily E3384_02925 IPR003509 Uncharacterised protein family UPF0102 E3384_02925 IPR011335 Restriction endonuclease type II-like E3384_02930 IPR028082 Periplasmic binding protein-like I E3384_02930 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_02930 IPR007443 Penicillin-binding protein activator LpoA E3384_02930 IPR008939 Lytic transglycosylase, superhelical U-shaped E3384_02935 IPR000878 Tetrapyrrole methylase E3384_02935 IPR035996 Tetrapyrrole methylase superfamily E3384_02935 IPR018063 SAM-dependent methyltransferase RsmI, conserved site E3384_02935 IPR014777 Tetrapyrrole methylase, subdomain 1 E3384_02935 IPR014776 Tetrapyrrole methylase, subdomain 2 E3384_02935 IPR008189 rRNA small subunit methyltransferase I E3384_02940 IPR036390 Winged helix DNA-binding domain superfamily E3384_02940 IPR001034 DeoR-type HTH domain E3384_02940 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_02940 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_02945 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E3384_02945 IPR011032 GroES-like superfamily E3384_02945 IPR036291 NAD(P)-binding domain superfamily E3384_02945 IPR020843 Polyketide synthase, enoylreductase domain E3384_02945 IPR013149 Alcohol dehydrogenase, C-terminal E3384_02945 IPR013154 Alcohol dehydrogenase, N-terminal E3384_02950 IPR013853 Galactitol permease IIC component E3384_02950 IPR013014 Phosphotransferase system, EIIC component, type 2 E3384_02950 IPR004703 Phosphotransferase system, sugar-specific permease component E3384_02955 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_02955 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_02955 IPR036095 PTS system IIB component-like superfamily E3384_02960 IPR016152 Phosphotransferase/anion transporter E3384_02960 IPR002178 PTS EIIA type-2 domain E3384_02965 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like E3384_02965 IPR013785 Aldolase-type TIM barrel E3384_02965 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ E3384_02970 IPR035895 HPr-like superfamily E3384_02970 IPR000032 Phosphocarrier protein HPr-like E3384_02970 IPR002178 PTS EIIA type-2 domain E3384_02970 IPR016152 Phosphotransferase/anion transporter E3384_02970 IPR002114 Phosphotransferase system, HPr serine phosphorylation site E3384_02970 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site E3384_02975 IPR013014 Phosphotransferase system, EIIC component, type 2 E3384_02975 IPR003353 Phosphotransferase system, fructose-specific IIB subunit E3384_02975 IPR036095 PTS system IIB component-like superfamily E3384_02975 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_02975 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_02975 IPR006327 Phosphotransferase system, fructose IIC component E3384_02975 IPR004715 Phosphotransferase system, IIA component fructose subfamily E3384_02975 IPR016152 Phosphotransferase/anion transporter E3384_02975 IPR002178 PTS EIIA type-2 domain E3384_02980 IPR017583 Tagatose/fructose phosphokinase E3384_02980 IPR011611 Carbohydrate kinase PfkB E3384_02980 IPR029056 Ribokinase-like E3384_02980 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_02980 IPR005926 Tagatose-6-phosphate kinase E3384_02985 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY E3384_02985 IPR000771 Fructose-bisphosphate aldolase, class-II E3384_02985 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY E3384_02985 IPR013785 Aldolase-type TIM barrel E3384_02990 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_02990 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_02990 IPR014036 DeoR C-terminal sensor domain E3384_02990 IPR001034 DeoR-type HTH domain E3384_02990 IPR037171 NagB/RpiA transferase-like E3384_02990 IPR036390 Winged helix DNA-binding domain superfamily E3384_02995 IPR000595 Cyclic nucleotide-binding domain E3384_02995 IPR029056 Ribokinase-like E3384_02995 IPR011611 Carbohydrate kinase PfkB E3384_03000 IPR007392 D-galactarate/Altronate dehydratase, C-terminal E3384_03000 IPR017654 Galactarate dehydratase GarD-like E3384_03000 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae E3384_03000 IPR013974 SAF domain E3384_03005 IPR017648 5-keto-4-deoxy-D-glucarate aldolase E3384_03005 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_03005 IPR040442 Pyruvate kinase-like domain superfamily E3384_03005 IPR005000 HpcH/HpaI aldolase/citrate lyase domain E3384_03010 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain E3384_03010 IPR006398 2-hydroxy-3-oxopropionate reductase E3384_03010 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site E3384_03010 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_03010 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_03010 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding E3384_03010 IPR036291 NAD(P)-binding domain superfamily E3384_03010 IPR015815 3-hydroxyisobutyrate dehydrogenase-related E3384_03015 IPR036129 Glycerate kinase superfamily E3384_03015 IPR004381 Glycerate kinase E3384_03015 IPR018197 Glycerate kinase, restriction-enzyme-like fold E3384_03015 IPR018193 Glycerate kinase, flavodoxin-like fold E3384_03025 IPR036390 Winged helix DNA-binding domain superfamily E3384_03025 IPR005119 LysR, substrate-binding E3384_03025 IPR000847 Transcription regulator HTH, LysR E3384_03025 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_03030 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme E3384_03030 IPR005789 Threonine dehydratase, catabolic E3384_03030 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site E3384_03030 IPR001926 Pyridoxal-phosphate dependent enzyme E3384_03035 IPR023726 Threonine/serine transporter TdcC E3384_03035 IPR004694 Hydroxy amino acid transporter E3384_03035 IPR018227 Amino acid/polyamine transporter 2 E3384_03040 IPR004372 Acetate/propionate kinase E3384_03040 IPR000890 Aliphatic acid kinase, short-chain E3384_03040 IPR023865 Aliphatic acid kinase, short-chain, conserved site E3384_03040 IPR024917 Propionate kinase E3384_03045 IPR005949 Formate acetyltransferase E3384_03045 IPR019777 Formate C-acetyltransferase glycine radical, conserved site E3384_03045 IPR001150 Glycine radical domain E3384_03045 IPR004184 Pyruvate formate lyase domain E3384_03050 IPR005131 Serine dehydratase beta chain E3384_03050 IPR029009 Allosteric substrate binding domain superfamily E3384_03050 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form E3384_03050 IPR005130 Serine dehydratase-like, alpha subunit E3384_03060 IPR021144 Uncharacterised protein family UPF0597 E3384_03060 IPR005130 Serine dehydratase-like, alpha subunit E3384_03070 IPR011051 RmlC-like cupin domain superfamily E3384_03070 IPR003829 Pirin, N-terminal domain E3384_03070 IPR014710 RmlC-like jelly roll fold E3384_03070 IPR012093 Pirin E3384_03070 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain E3384_03075 IPR036390 Winged helix DNA-binding domain superfamily E3384_03075 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_03075 IPR000847 Transcription regulator HTH, LysR E3384_03075 IPR005119 LysR, substrate-binding E3384_03080 IPR008523 Protein of unknown function DUF805 E3384_03085 IPR036249 Thioredoxin-like superfamily E3384_03085 IPR004045 Glutathione S-transferase, N-terminal E3384_03085 IPR016639 Glutathione S-transferase Omega/GSH E3384_03085 IPR040079 Glutathione Transferase family E3384_03085 IPR036282 Glutathione S-transferase, C-terminal domain superfamily E3384_03085 IPR010987 Glutathione S-transferase, C-terminal-like E3384_03090 IPR032808 DoxX family E3384_03095 IPR025612 YqjK-like protein E3384_03100 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III E3384_03105 IPR010279 Inner membrane protein YqjD/ElaB E3384_03110 IPR009468 Protein of unknown function DUF1090 E3384_03115 IPR026574 Modulator protein MzrA E3384_03115 IPR027398 SecD export protein N-terminal TM domain E3384_03120 IPR032818 DedA family E3384_03120 IPR032816 SNARE associated Golgi protein E3384_03125 IPR036458 Sodium:dicarboxylate symporter superfamily E3384_03125 IPR001991 Sodium:dicarboxylate symporter E3384_03125 IPR023025 Serine/threonine transporter SstT E3384_03130 IPR022369 Integral membrane protein TerC, riboswitch-linked E3384_03130 IPR005496 Integral membrane protein TerC E3384_03135 IPR000683 Oxidoreductase, N-terminal E3384_03135 IPR036291 NAD(P)-binding domain superfamily E3384_03140 IPR003848 Domain of unknown function DUF218 E3384_03145 IPR002725 Protein of unknown function DUF45 E3384_03155 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_03155 IPR023753 FAD/NAD(P)-binding domain E3384_03155 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal E3384_03155 IPR013785 Aldolase-type TIM barrel E3384_03160 IPR015424 Pyridoxal phosphate-dependent transferase E3384_03160 IPR005814 Aminotransferase class-III E3384_03160 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_03160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_03160 IPR017747 Putrescine aminotransferase E3384_03165 IPR000014 PAS domain E3384_03165 IPR013655 PAS fold-3 E3384_03165 IPR035965 PAS domain superfamily E3384_03165 IPR004090 Chemotaxis methyl-accepting receptor E3384_03165 IPR003660 HAMP domain E3384_03165 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E3384_03165 IPR001610 PAC motif E3384_03165 IPR000014 PAS domain E3384_03165 IPR003660 HAMP domain E3384_03165 IPR004090 Chemotaxis methyl-accepting receptor E3384_03165 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E3384_03165 IPR035965 PAS domain superfamily E3384_03165 IPR013655 PAS fold-3 E3384_03165 IPR001610 PAC motif E3384_03170 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E3384_03170 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding E3384_03170 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site E3384_03170 IPR003660 HAMP domain E3384_03170 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily E3384_03170 IPR004090 Chemotaxis methyl-accepting receptor E3384_03175 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_03175 IPR005149 Transcription regulator PadR, N-terminal E3384_03175 IPR036390 Winged helix DNA-binding domain superfamily E3384_03180 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain E3384_03180 IPR013113 FAD-binding 9, siderophore-interacting E3384_03180 IPR017927 FAD-binding domain, ferredoxin reductase-type E3384_03180 IPR039374 Siderophore-interacting protein E3384_03180 IPR017938 Riboflavin synthase-like beta-barrel E3384_03180 IPR007037 Siderophore-interacting protein, C-terminal domain E3384_03190 IPR005122 Uracil-DNA glycosylase-like E3384_03190 IPR036895 Uracil-DNA glycosylase-like domain superfamily E3384_03190 IPR015637 G/U mismatch-specific DNA glycosylase E3384_03190 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial E3384_03195 IPR013325 RNA polymerase sigma factor, region 2 E3384_03195 IPR014284 RNA polymerase sigma-70 like domain E3384_03195 IPR042189 Sigma-70 factor, region 1.1 superfamily E3384_03195 IPR007630 RNA polymerase sigma-70 region 4 E3384_03195 IPR007624 RNA polymerase sigma-70 region 3 E3384_03195 IPR007127 RNA polymerase sigma factor 70, region 1.1 E3384_03195 IPR007627 RNA polymerase sigma-70 region 2 E3384_03195 IPR009042 RNA polymerase sigma-70 region 1.2 E3384_03195 IPR013324 RNA polymerase sigma factor, region 3/4-like E3384_03195 IPR000943 RNA polymerase sigma-70 E3384_03195 IPR007631 RNA polymerase sigma factor 70, non-essential domain E3384_03195 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_03195 IPR028630 RNA polymerase sigma factor RpoD E3384_03195 IPR012760 RNA polymerase sigma factor RpoD, C-terminal E3384_03200 IPR006295 DNA primase, DnaG E3384_03200 IPR013264 DNA primase, catalytic core, N-terminal E3384_03200 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal E3384_03200 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily E3384_03200 IPR019475 DNA primase, DnaB-helicase binding domain E3384_03200 IPR002694 Zinc finger, CHC2-type E3384_03200 IPR006171 TOPRIM domain E3384_03200 IPR034151 Bacterial DnaG primase, TOPRIM domain E3384_03200 IPR030846 DNA primase DnaG, bacteria E3384_03200 IPR036977 DNA Primase, CHC2-type zinc finger E3384_03200 IPR013173 DNA primase DnaG, DnaB-binding domain E3384_03205 IPR018278 Ribosomal protein S21, conserved site E3384_03205 IPR038380 Ribosomal protein S21 superfamily E3384_03205 IPR001911 Ribosomal protein S21 E3384_03210 IPR017860 Peptidase M22, conserved site E3384_03210 IPR000905 Gcp-like domain E3384_03210 IPR017861 Kae1/TsaD family E3384_03210 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD E3384_03225 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY E3384_03230 IPR006156 Dihydroneopterin aldolase E3384_03230 IPR006157 Dihydroneopterin aldolase/epimerase domain E3384_03235 IPR003824 Undecaprenyl-diphosphatase UppP E3384_03240 IPR012006 tRNA nucleotidyltransferase, proteobacteria E3384_03240 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain E3384_03240 IPR003607 HD/PDEase domain E3384_03240 IPR006674 HD domain E3384_03240 IPR002646 Poly A polymerase, head domain E3384_03245 IPR003646 SH3-like domain, bacterial-type E3384_03245 IPR016476 SH3 domain protein E3384_03250 IPR007899 CHAD domain E3384_03250 IPR023577 CYTH domain E3384_03250 IPR039013 Inorganic triphosphatase YgiF E3384_03250 IPR033469 CYTH-like domain superfamily E3384_03255 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme E3384_03255 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain E3384_03255 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase E3384_03260 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_03260 IPR011913 RfaE bifunctional protein, domain I E3384_03260 IPR011914 RfaE bifunctional protein, domain II E3384_03260 IPR011611 Carbohydrate kinase PfkB E3384_03260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_03260 IPR023030 Bifunctional protein HldE E3384_03260 IPR004821 Cytidyltransferase-like domain E3384_03260 IPR029056 Ribokinase-like E3384_03270 IPR036013 Band 7/SPFH domain superfamily E3384_03270 IPR001107 Band 7 domain E3384_03270 IPR031905 Flotillin, C-terminal domain E3384_03270 IPR027705 Flotillin family E3384_03275 IPR010840 Protein of unknown function DUF1449 E3384_03280 IPR015065 Surface composition regulator E3384_03280 IPR036295 GlgS superfamily E3384_03285 IPR007475 Ubiquinone biosynthesis accessory factor UbiK E3384_03290 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB E3384_03290 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily E3384_03295 IPR023380 DsbB-like superfamily E3384_03295 IPR003752 Disulphide bond formation protein DsbB/BdbC E3384_03295 IPR023792 Protein-disulfide oxidoreductase DsbI E3384_03300 IPR036249 Thioredoxin-like superfamily E3384_03300 IPR028588 Thiol:disulfide interchange protein DsbL E3384_03300 IPR013766 Thioredoxin domain E3384_03300 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL E3384_03300 IPR001853 DSBA-like thioredoxin domain E3384_03305 IPR038477 Arylsulfotransferase, N-terminal domain superfamily E3384_03305 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria E3384_03305 IPR010262 Arylsulfotransferase, bacteria E3384_03305 IPR035391 Arylsulfotransferase, Ig-like domain E3384_03310 IPR003689 Zinc/iron permease E3384_03310 IPR023498 Zinc transporter ZupT E3384_03315 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type E3384_03315 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B E3384_03320 IPR016185 Pre-ATP-grasp domain superfamily E3384_03320 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain E3384_03325 IPR009576 Biofilm formation YgiB E3384_03330 IPR010130 Type I secretion outer membrane protein, TolC E3384_03330 IPR003423 Outer membrane efflux protein E3384_03335 IPR015797 NUDIX hydrolase-like domain superfamily E3384_03335 IPR020084 NUDIX hydrolase, conserved site E3384_03335 IPR000086 NUDIX hydrolase domain E3384_03335 IPR004385 Nucleoside diphosphate pyrophosphatase E3384_03340 IPR009659 Protein of unknown function DUF1249 E3384_03345 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E3384_03345 IPR029052 Metallo-dependent phosphatase-like E3384_03345 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA E3384_03350 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA E3384_03350 IPR029058 Alpha/Beta hydrolase fold E3384_03355 IPR018522 DNA topoisomerase, type IIA, conserved site E3384_03355 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative E3384_03355 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_03355 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_03355 IPR002288 DNA gyrase B subunit, C-terminal E3384_03355 IPR006171 TOPRIM domain E3384_03355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_03355 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 E3384_03355 IPR003594 Histidine kinase/HSP90-like ATPase E3384_03355 IPR001241 DNA topoisomerase, type IIA E3384_03355 IPR013760 DNA topoisomerase, type IIA-like domain superfamily E3384_03355 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal E3384_03360 IPR007138 Antibiotic biosynthesis monooxygenase domain E3384_03360 IPR011008 Dimeric alpha-beta barrel E3384_03365 IPR003680 Flavodoxin-like fold E3384_03365 IPR029039 Flavoprotein-like superfamily E3384_03370 IPR003594 Histidine kinase/HSP90-like ATPase E3384_03370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_03370 IPR005467 Histidine kinase domain E3384_03370 IPR013727 Two-component sensor kinase, N-terminal E3384_03370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_03370 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_03370 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_03370 IPR003660 HAMP domain E3384_03375 IPR039420 Transcriptional regulatory protein WalR-like E3384_03375 IPR001789 Signal transduction response regulator, receiver domain E3384_03375 IPR016032 Signal transduction response regulator, C-terminal effector E3384_03375 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_03375 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_03375 IPR011006 CheY-like superfamily E3384_03380 IPR016052 Bacteriophage 933W, L0136 E3384_03380 IPR005220 Bacterial OB-fold E3384_03380 IPR036700 Bacterial OB-fold superfamily E3384_03385 IPR010499 Bacterial transcription activator, effector binding E3384_03385 IPR029442 GyrI-like small molecule binding domain E3384_03385 IPR011256 Regulatory factor, effector binding domain superfamily E3384_03390 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative E3384_03390 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat E3384_03390 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal E3384_03390 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal E3384_03390 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily E3384_03390 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta E3384_03390 IPR013760 DNA topoisomerase, type IIA-like domain superfamily E3384_03395 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase E3384_03395 IPR002123 Phospholipid/glycerol acyltransferase E3384_03400 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_03400 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_03400 IPR011706 Multicopper oxidase, type 2 E3384_03400 IPR026589 Cell division protein FtsP E3384_03400 IPR011707 Multicopper oxidase, type 3 E3384_03400 IPR008972 Cupredoxin E3384_03400 IPR001117 Multicopper oxidase, type 1 E3384_03405 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit E3384_03405 IPR004681 TRAP transporter large membrane protein DctM E3384_03415 IPR004682 TRAP transporter solute receptor, DctP family E3384_03415 IPR018389 TRAP transporter solute receptor DctP/TeaA E3384_03415 IPR038404 TRAP transporter solute receptor DctP superfamily E3384_03420 IPR024560 Uncharacterised protein family UPF0313, C-terminal E3384_03420 IPR023404 Radical SAM, alpha/beta horseshoe E3384_03420 IPR007197 Radical SAM E3384_03420 IPR013704 Uncharacterised protein family UPF0313, N-terminal E3384_03420 IPR020612 Methylthiotransferase, conserved site E3384_03420 IPR006638 Elp3/MiaB/NifB E3384_03420 IPR022946 Uncharacterised protein family UPF0313 E3384_03435 IPR001898 Solute carrier family 13 E3384_03435 IPR030676 Citrate carrier CitT-related E3384_03440 IPR036812 NADP-dependent oxidoreductase domain superfamily E3384_03440 IPR018170 Aldo/keto reductase, conserved site E3384_03440 IPR020471 Aldo/keto reductase E3384_03440 IPR023210 NADP-dependent oxidoreductase domain E3384_03445 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA E3384_03445 IPR018211 Alcohol dehydrogenase, iron-type, conserved site E3384_03450 IPR009594 Transcription regulator HTH, AraC, N-terminal E3384_03450 IPR018060 DNA binding HTH domain, AraC-type E3384_03450 IPR009057 Homeobox-like domain superfamily E3384_03455 IPR032818 DedA family E3384_03455 IPR032816 SNARE associated Golgi protein E3384_03460 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_03460 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme E3384_03460 IPR006233 Cystathionine beta-lyase, bacterial E3384_03460 IPR015424 Pyridoxal phosphate-dependent transferase E3384_03460 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_03465 IPR014164 TonB-system energizer ExbB type-1 E3384_03465 IPR002898 MotA/TolQ/ExbB proton channel E3384_03470 IPR014170 TonB system transport protein ExbD type-1 E3384_03470 IPR003400 Biopolymer transport protein ExbD/TolR E3384_03475 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_03475 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_03475 IPR036291 NAD(P)-binding domain superfamily E3384_03495 IPR020761 Uncharacterised protein family UPF0114, bacteria E3384_03495 IPR005134 Uncharacterised protein family UPF0114 E3384_03500 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding E3384_03500 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E3384_03500 IPR003660 HAMP domain E3384_03500 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site E3384_03500 IPR004090 Chemotaxis methyl-accepting receptor E3384_03500 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily E3384_03505 IPR022574 Protein of unknown function DUF2623 E3384_03510 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit E3384_03510 IPR001821 [NiFe]-hydrogenase, small subunit E3384_03510 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_03510 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_03510 IPR027394 Cytochrome-c3 hydrogenase, C-terminal E3384_03510 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily E3384_03510 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily E3384_03515 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_03515 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_03515 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_03520 IPR005614 NrfD family E3384_03525 IPR029014 [NiFe]-hydrogenase, large subunit E3384_03525 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site E3384_03525 IPR001501 Nickel-dependent hydrogenase, large subunit E3384_03530 IPR023430 Peptidase HybD-like domain superfamily E3384_03530 IPR000671 Peptidase A31 family E3384_03530 IPR004419 Peptidase A31, hydrogenase expression/formation protein E3384_03535 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily E3384_03535 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE E3384_03540 IPR039002 Hydrogenase maturation factor HybF E3384_03540 IPR000688 Hydrogenase maturation factor HypA/HybF E3384_03540 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site E3384_03545 IPR037254 HupF/HypC superfamily E3384_03545 IPR001109 Hydrogenase expression/formation protein, HupF/HypC E3384_03545 IPR019812 Hydrogenase assembly chaperone, conserved site E3384_03560 IPR040079 Glutathione Transferase family E3384_03560 IPR010987 Glutathione S-transferase, C-terminal-like E3384_03560 IPR004045 Glutathione S-transferase, N-terminal E3384_03560 IPR036249 Thioredoxin-like superfamily E3384_03560 IPR036282 Glutathione S-transferase, C-terminal domain superfamily E3384_03565 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain E3384_03565 IPR038765 Papain-like cysteine peptidase superfamily E3384_03565 IPR007921 CHAP domain E3384_03565 IPR016185 Pre-ATP-grasp domain superfamily E3384_03575 IPR003766 Uronate isomerase E3384_03575 IPR032466 Metal-dependent hydrolase E3384_03580 IPR000669 Mannitol dehydrogenase E3384_03580 IPR036291 NAD(P)-binding domain superfamily E3384_03580 IPR013118 Mannitol dehydrogenase, C-terminal E3384_03580 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_03580 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_03580 IPR023027 Mannitol dehydrogenase, conserved site E3384_03580 IPR013131 Mannitol dehydrogenase, N-terminal E3384_03585 IPR036237 Xylose isomerase-like superfamily E3384_03585 IPR004628 Mannonate dehydratase E3384_03590 IPR020846 Major facilitator superfamily domain E3384_03590 IPR011701 Major facilitator superfamily E3384_03590 IPR036259 MFS transporter superfamily E3384_03600 IPR037950 Peptidoglycan deacetylase PgdA-like E3384_03600 IPR002509 NodB homology domain E3384_03600 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel E3384_03610 IPR023776 Anti-adapter protein, IraD E3384_03610 IPR007048 IraD/Gp25-like E3384_03615 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_03615 IPR015590 Aldehyde dehydrogenase domain E3384_03615 IPR016161 Aldehyde/histidinol dehydrogenase E3384_03615 IPR016160 Aldehyde dehydrogenase, cysteine active site E3384_03615 IPR029510 Aldehyde dehydrogenase, glutamic acid active site E3384_03615 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_03620 IPR006076 FAD dependent oxidoreductase E3384_03620 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_03630 IPR002293 Amino acid/polyamine transporter I E3384_03630 IPR004758 Amino acid transporter E3384_03640 IPR016032 Signal transduction response regulator, C-terminal effector E3384_03640 IPR000792 Transcription regulator LuxR, C-terminal E3384_03640 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_03645 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme E3384_03645 IPR013785 Aldolase-type TIM barrel E3384_03645 IPR007197 Radical SAM E3384_03645 IPR023885 4Fe4S-binding SPASM domain E3384_03650 IPR017850 Alkaline-phosphatase-like, core domain superfamily E3384_03650 IPR024607 Sulfatase, conserved site E3384_03650 IPR000917 Sulfatase, N-terminal E3384_03655 IPR036390 Winged helix DNA-binding domain superfamily E3384_03655 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain E3384_03655 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_03655 IPR000847 Transcription regulator HTH, LysR E3384_03655 IPR005119 LysR, substrate-binding E3384_03660 IPR005000 HpcH/HpaI aldolase/citrate lyase domain E3384_03660 IPR040442 Pyruvate kinase-like domain superfamily E3384_03660 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_03660 IPR011206 Citrate lyase beta subunit-like E3384_03665 IPR029069 HotDog domain superfamily E3384_03665 IPR002539 MaoC-like dehydratase domain E3384_03665 IPR016790 Thiol ester hydratase, Rv0216, predicted E3384_03670 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain E3384_03670 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily E3384_03670 IPR003702 Acetyl-CoA hydrolase/transferase E3384_03670 IPR037171 NagB/RpiA transferase-like E3384_03675 IPR037523 Vicinal oxygen chelate (VOC) domain E3384_03675 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain E3384_03675 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase E3384_03685 IPR007563 Protein of unknown function DUF554 E3384_03690 IPR011193 Ornithine/lysine/arginine decarboxylase E3384_03690 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal E3384_03690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_03690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_03690 IPR015424 Pyridoxal phosphate-dependent transferase E3384_03690 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily E3384_03690 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal E3384_03690 IPR027464 Ornithine decarboxylase, N-terminal E3384_03690 IPR000310 Orn/Lys/Arg decarboxylase, major domain E3384_03690 IPR011006 CheY-like superfamily E3384_03695 IPR020846 Major facilitator superfamily domain E3384_03695 IPR033667 Nucleoside permease NupG E3384_03695 IPR036259 MFS transporter superfamily E3384_03695 IPR004740 Nucleoside:H+ symporter E3384_03700 IPR024570 Murein transglycosylase-C, N-terminal E3384_03700 IPR023664 Murein transglycosylase-C E3384_03700 IPR023346 Lysozyme-like domain superfamily E3384_03700 IPR008258 Transglycosylase SLT domain 1 E3384_03700 IPR000189 Prokaryotic transglycosylase, active site E3384_03705 IPR007457 Fe(II) trafficking protein YggX E3384_03705 IPR036766 Fe(II) trafficking protein YggX superfamily E3384_03710 IPR005760 A/G-specific adenine glycosylase MutY E3384_03710 IPR000445 Helix-hairpin-helix motif E3384_03710 IPR011257 DNA glycosylase E3384_03710 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif E3384_03710 IPR004035 Endonuclease III, iron-sulphur binding site E3384_03710 IPR003265 HhH-GPD domain E3384_03710 IPR029119 MutY, C-terminal E3384_03710 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal E3384_03710 IPR015797 NUDIX hydrolase-like domain superfamily E3384_03710 IPR004036 Endonuclease III-like, conserved site-2 E3384_03715 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type E3384_03715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_03720 IPR007416 Protein of unknown function DUF469 E3384_03725 IPR021307 Protein of unknown function DUF2884 E3384_03730 IPR037152 L-asparaginase, N-terminal domain superfamily E3384_03730 IPR027474 L-asparaginase, N-terminal E3384_03730 IPR027473 L-asparaginase, C-terminal E3384_03730 IPR040919 Asparaginase/glutaminase, C-terminal E3384_03730 IPR027475 Asparaginase/glutaminase, active site 2 E3384_03730 IPR004550 L-asparaginase, type II E3384_03730 IPR020827 Asparaginase/glutaminase, active site 1 E3384_03730 IPR006034 Asparaginase/glutaminase-like E3384_03730 IPR036152 Asparaginase/glutaminase-like superfamily E3384_03735 IPR009592 Protein of unknown function DUF1202 E3384_03740 IPR023404 Radical SAM, alpha/beta horseshoe E3384_03740 IPR007197 Radical SAM E3384_03740 IPR004559 Heme chaperone HemW-like E3384_03740 IPR010723 HemN, C-terminal E3384_03740 IPR006638 Elp3/MiaB/NifB E3384_03740 IPR034505 Anaerobic coproporphyrinogen-III oxidase E3384_03745 IPR002637 Ham1-like protein E3384_03745 IPR029001 Inosine triphosphate pyrophosphatase-like E3384_03745 IPR020922 dITP/XTP pyrophosphatase E3384_03750 IPR005228 Conserved hypothetical protein CHP00251 E3384_03750 IPR003746 Protein of unknown function DUF167 E3384_03750 IPR036591 YggU-like superfamily E3384_03755 IPR003425 CCB3/YggT E3384_03760 IPR001608 Alanine racemase, N-terminal E3384_03760 IPR029066 PLP-binding barrel E3384_03760 IPR011078 Pyridoxal phosphate homeostasis protein E3384_03765 IPR006321 Pilus retraction protein PilT E3384_03765 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_03765 IPR003593 AAA+ ATPase domain E3384_03765 IPR001482 Type II/IV secretion system protein E3384_03775 IPR012337 Ribonuclease H-like superfamily E3384_03775 IPR006641 YqgF/RNase H-like domain E3384_03775 IPR037027 YqgF/RNase H-like domain superfamily E3384_03775 IPR005227 Putative pre-16S rRNA nuclease E3384_03780 IPR003774 Protein of unknown function UPF0301 E3384_03785 IPR013815 ATP-grasp fold, subdomain 1 E3384_03785 IPR006284 Glutathione synthetase, prokaryotic E3384_03785 IPR004218 Prokaryotic glutathione synthetase, ATP-binding E3384_03785 IPR004215 Prokaryotic glutathione synthetase, N-terminal E3384_03785 IPR011761 ATP-grasp fold E3384_03785 IPR016185 Pre-ATP-grasp domain superfamily E3384_03790 IPR029028 Alpha/beta knot methyltransferases E3384_03790 IPR015947 PUA-like superfamily E3384_03790 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E3384_03790 IPR006700 Ribosomal RNA small subunit methyltransferase E E3384_03795 IPR007346 Endonuclease I E3384_03800 IPR006640 SprT-like E3384_03800 IPR035240 SprT-like, zinc ribbon domain E3384_03800 IPR023483 Uncharacterised protein family SprT E3384_03805 IPR020846 Major facilitator superfamily domain E3384_03805 IPR036259 MFS transporter superfamily E3384_03805 IPR003663 Sugar/inositol transporter E3384_03805 IPR005829 Sugar transporter, conserved site E3384_03805 IPR005828 Major facilitator, sugar transporter-like E3384_03810 IPR002133 S-adenosylmethionine synthetase E3384_03810 IPR022628 S-adenosylmethionine synthetase, N-terminal E3384_03810 IPR022629 S-adenosylmethionine synthetase, central domain E3384_03810 IPR022630 S-adenosylmethionine synthetase, C-terminal E3384_03810 IPR022631 S-adenosylmethionine synthetase, conserved site E3384_03810 IPR022636 S-adenosylmethionine synthetase superfamily E3384_03825 IPR029066 PLP-binding barrel E3384_03825 IPR000183 Ornithine/DAP/Arg decarboxylase E3384_03825 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site E3384_03825 IPR041128 Arginine decarboxylase, C-terminal helical E3384_03825 IPR002985 Arginine decarboxylase E3384_03825 IPR040634 Arginine decarboxylase, helical bundle domain E3384_03825 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site E3384_03825 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal E3384_03825 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal E3384_03835 IPR000524 Transcription regulator HTH, GntR E3384_03835 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_03835 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_03835 IPR011711 GntR, C-terminal E3384_03835 IPR036390 Winged helix DNA-binding domain superfamily E3384_03845 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_03845 IPR013118 Mannitol dehydrogenase, C-terminal E3384_03845 IPR000669 Mannitol dehydrogenase E3384_03845 IPR013131 Mannitol dehydrogenase, N-terminal E3384_03845 IPR036291 NAD(P)-binding domain superfamily E3384_03845 IPR023027 Mannitol dehydrogenase, conserved site E3384_03845 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_03850 IPR013154 Alcohol dehydrogenase, N-terminal E3384_03850 IPR011032 GroES-like superfamily E3384_03850 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E3384_03850 IPR036291 NAD(P)-binding domain superfamily E3384_03850 IPR013149 Alcohol dehydrogenase, C-terminal E3384_03850 IPR020843 Polyketide synthase, enoylreductase domain E3384_03855 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily E3384_03855 IPR003767 Malate/L-lactate dehydrogenase-like E3384_03860 IPR037012 YhcH/YjgK/YiaL superfamily E3384_03860 IPR004375 YhcH/YjgK/YiaL family E3384_03865 IPR000073 Alpha/beta hydrolase fold-1 E3384_03865 IPR029058 Alpha/Beta hydrolase fold E3384_03870 IPR006035 Ureohydrolase E3384_03870 IPR023696 Ureohydrolase domain superfamily E3384_03870 IPR020855 Ureohydrolase, manganese-binding site E3384_03870 IPR023694 Agmatinase E3384_03870 IPR005925 Agmatinase-related E3384_03875 IPR001915 Peptidase M48 E3384_03880 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II E3384_03880 IPR029061 Thiamin diphosphate-binding fold E3384_03880 IPR005475 Transketolase-like, pyrimidine-binding domain E3384_03880 IPR033248 Transketolase, C-terminal domain E3384_03880 IPR033247 Transketolase family E3384_03880 IPR020826 Transketolase binding site E3384_03880 IPR005474 Transketolase, N-terminal E3384_03880 IPR005478 Transketolase, bacterial-like E3384_03885 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_03885 IPR017871 ABC transporter, conserved site E3384_03885 IPR003439 ABC transporter-like E3384_03885 IPR003593 AAA+ ATPase domain E3384_03890 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 E3384_03890 IPR003439 ABC transporter-like E3384_03890 IPR003593 AAA+ ATPase domain E3384_03890 IPR015856 ABC transporter, CbiO/EcfA subunit E3384_03890 IPR017871 ABC transporter, conserved site E3384_03890 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_03910 IPR036291 NAD(P)-binding domain superfamily E3384_03910 IPR006422 D-erythrose-4-phosphate dehydrogenase E3384_03910 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family E3384_03910 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site E3384_03910 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain E3384_03910 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I E3384_03910 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain E3384_03915 IPR015824 Phosphoglycerate kinase, N-terminal E3384_03915 IPR015911 Phosphoglycerate kinase, conserved site E3384_03915 IPR001576 Phosphoglycerate kinase E3384_03915 IPR036043 Phosphoglycerate kinase superfamily E3384_03920 IPR013785 Aldolase-type TIM barrel E3384_03920 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype E3384_03920 IPR000771 Fructose-bisphosphate aldolase, class-II E3384_03925 IPR011066 Mechanosensitive ion channel MscS, C-terminal E3384_03925 IPR008910 Conserved TM helix E3384_03925 IPR023408 Mechanosensitive ion channel MscS domain superfamily E3384_03925 IPR006686 Mechanosensitive ion channel MscS, conserved site E3384_03925 IPR010920 LSM domain superfamily E3384_03925 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 E3384_03925 IPR006685 Mechanosensitive ion channel MscS E3384_03930 IPR004777 L-lysine exporter/arginine exporter E3384_03930 IPR001123 Amino acid exporter protein, LeuE-type E3384_03930 IPR023445 Arginine exporter protein ArgO, enterobacteria E3384_03935 IPR007497 Protein of unknown function DUF541 E3384_03940 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_03940 IPR017685 HTH-type transcriptional regulator ArgP E3384_03940 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria E3384_03940 IPR005119 LysR, substrate-binding E3384_03940 IPR036390 Winged helix DNA-binding domain superfamily E3384_03940 IPR000847 Transcription regulator HTH, LysR E3384_03945 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup E3384_03945 IPR004788 Ribose 5-phosphate isomerase, type A E3384_03945 IPR037171 NagB/RpiA transferase-like E3384_03950 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site E3384_03950 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain E3384_03950 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3384_03950 IPR002912 ACT domain E3384_03950 IPR036291 NAD(P)-binding domain superfamily E3384_03950 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 E3384_03955 IPR037171 NagB/RpiA transferase-like E3384_03955 IPR002698 5-formyltetrahydrofolate cyclo-ligase E3384_03955 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily E3384_03965 IPR023771 Cell division protein ZapA, eubacteria E3384_03965 IPR036192 Cell division protein ZapA-like superfamily E3384_03965 IPR007838 Cell division protein ZapA-like E3384_03970 IPR011978 Uncharacterised protein family UPF0149 E3384_03970 IPR036255 YgfB-like superfamily E3384_03975 IPR036005 Creatinase/aminopeptidase-like E3384_03975 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal E3384_03975 IPR007865 Aminopeptidase P, N-terminal E3384_03975 IPR001714 Peptidase M24, methionine aminopeptidase E3384_03975 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site E3384_03975 IPR000994 Peptidase M24 E3384_03980 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 E3384_03980 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase E3384_03980 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site E3384_03980 IPR002938 FAD-binding domain E3384_03980 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_03985 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_03985 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site E3384_03985 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 E3384_03985 IPR002938 FAD-binding domain E3384_03990 IPR028896 Aminomethyltransferase-like E3384_03990 IPR022903 Glycine cleavage system T protein, bacteria E3384_03990 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain E3384_03990 IPR006222 Aminomethyltransferase, folate-binding domain E3384_03990 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal E3384_03990 IPR006223 Glycine cleavage system T protein E3384_03990 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 E3384_03995 IPR011053 Single hybrid motif E3384_03995 IPR000089 Biotin/lipoyl attachment E3384_03995 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site E3384_03995 IPR002930 Glycine cleavage system H-protein E3384_03995 IPR033753 Glycine cleavage system H-protein/Simiate E3384_03995 IPR017453 Glycine cleavage system H-protein, subgroup E3384_04000 IPR003437 Glycine dehydrogenase (decarboxylating) E3384_04000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_04000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_04000 IPR015424 Pyridoxal phosphate-dependent transferase E3384_04000 IPR020581 Glycine cleavage system P protein E3384_04015 IPR018120 Glycoside hydrolase family 1, active site E3384_04015 IPR017853 Glycoside hydrolase superfamily E3384_04015 IPR001360 Glycoside hydrolase family 1 E3384_04015 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site E3384_04025 IPR005744 Hly-III E3384_04025 IPR004254 AdipoR/Haemolysin-III-related E3384_04030 IPR023758 tRNA-modifying protein YgfZ E3384_04030 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal E3384_04030 IPR006222 Aminomethyltransferase, folate-binding domain E3384_04030 IPR017703 YgfZ/GcvT conserved site E3384_04035 IPR036714 Flavinator of succinate dehydrogenase superfamily E3384_04035 IPR005631 Flavinator of succinate dehydrogenase E3384_04040 IPR009883 Inner membrane protein YgfX E3384_04045 IPR001226 Flavodoxin, conserved site E3384_04045 IPR008254 Flavodoxin/nitric oxide synthase E3384_04045 IPR029039 Flavoprotein-like superfamily E3384_04045 IPR010086 Flavodoxin, long chain E3384_04050 IPR011010 DNA breaking-rejoining enzyme, catalytic core E3384_04050 IPR011932 Tyrosine recombinase XerD E3384_04050 IPR004107 Integrase, SAM-like, N-terminal E3384_04050 IPR013762 Integrase-like, catalytic domain superfamily E3384_04050 IPR002104 Integrase, catalytic domain E3384_04050 IPR023009 Tyrosine recombinase XerC/XerD E3384_04050 IPR010998 Integrase/recombinase, N-terminal E3384_04055 IPR036249 Thioredoxin-like superfamily E3384_04055 IPR017937 Thioredoxin, conserved site E3384_04055 IPR012336 Thioredoxin-like fold E3384_04055 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily E3384_04055 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal E3384_04055 IPR033954 Disulphide bond isomerase, DsbC/G E3384_04060 IPR003156 DHHA1 domain E3384_04060 IPR004610 Bacterial RecJ exonuclease E3384_04060 IPR041122 RecJ, OB domain E3384_04060 IPR001667 DDH domain E3384_04060 IPR038763 DHH phosphoesterase superfamily E3384_04070 IPR002313 Lysine-tRNA ligase, class II E3384_04070 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_04070 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) E3384_04070 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type E3384_04070 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II E3384_04070 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal E3384_04070 IPR012340 Nucleic acid-binding, OB-fold E3384_04075 IPR000086 NUDIX hydrolase domain E3384_04075 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 E3384_04075 IPR015797 NUDIX hydrolase-like domain superfamily E3384_04085 IPR011055 Duplicated hybrid motif E3384_04085 IPR016047 Peptidase M23 E3384_04085 IPR036779 LysM domain superfamily E3384_04085 IPR018392 LysM domain E3384_04095 IPR002104 Integrase, catalytic domain E3384_04095 IPR025166 Integrase, DNA-binding domain E3384_04095 IPR011010 DNA breaking-rejoining enzyme, catalytic core E3384_04095 IPR038488 Integrase, DNA-binding domain superfamily E3384_04095 IPR010998 Integrase/recombinase, N-terminal E3384_04095 IPR013762 Integrase-like, catalytic domain superfamily E3384_04095 IPR004107 Integrase, SAM-like, N-terminal E3384_04110 IPR018334 ArsR-type transcription regulator, HTH motif E3384_04110 IPR011991 ArsR-like helix-turn-helix domain E3384_04110 IPR001845 HTH ArsR-type DNA-binding domain E3384_04110 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_04110 IPR036390 Winged helix DNA-binding domain superfamily E3384_04115 IPR036249 Thioredoxin-like superfamily E3384_04115 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD E3384_04120 IPR016300 Arsenical pump ATPase, ArsA/GET3 E3384_04120 IPR025723 Anion-transporting ATPase-like domain E3384_04120 IPR027541 Arsenical pump-driving ATPase E3384_04120 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_04125 IPR000802 Arsenical pump membrane protein, ArsB E3384_04130 IPR036249 Thioredoxin-like superfamily E3384_04130 IPR006659 Arsenate reductase E3384_04130 IPR006660 Arsenate reductase-like E3384_04145 IPR003593 AAA+ ATPase domain E3384_04145 IPR027541 Arsenical pump-driving ATPase E3384_04145 IPR016300 Arsenical pump ATPase, ArsA/GET3 E3384_04145 IPR025723 Anion-transporting ATPase-like domain E3384_04145 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_04150 IPR036249 Thioredoxin-like superfamily E3384_04150 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD E3384_04160 IPR005025 NADPH-dependent FMN reductase-like E3384_04160 IPR029039 Flavoprotein-like superfamily E3384_04160 IPR014063 Arsenate resistance ArsH E3384_04195 IPR008962 PapD-like superfamily E3384_04195 IPR001829 Pili assembly chaperone, bacterial E3384_04195 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_04195 IPR016147 Pili assembly chaperone, N-terminal E3384_04195 IPR018046 Pili assembly chaperone, conserved site E3384_04195 IPR013783 Immunoglobulin-like fold E3384_04195 IPR016148 Pili assembly chaperone, C-terminal E3384_04200 IPR042186 Outer membrane usher protein FimD, plug domain E3384_04200 IPR025949 PapC-like, C-terminal domain E3384_04200 IPR000015 Outer membrane usher protein E3384_04200 IPR025885 PapC, N-terminal domain E3384_04200 IPR018030 Fimbrial membrane usher, conserved site E3384_04200 IPR037224 PapC, N-terminal domain superfamily E3384_04210 IPR003416 MgtC/SapB/SrpB/YhiD family E3384_04255 IPR013078 Histidine phosphatase superfamily, clade-1 E3384_04255 IPR029033 Histidine phosphatase superfamily E3384_04260 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily E3384_04260 IPR029229 Alkyl sulfatase, C-terminal E3384_04260 IPR029228 Alkyl sulfatase dimerisation domain E3384_04260 IPR001279 Metallo-beta-lactamase E3384_04260 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E3384_04260 IPR036527 SCP2 sterol-binding domain superfamily E3384_04265 IPR024393 Mechanosensitive ion channel MscS, porin domain E3384_04265 IPR025692 Mechanosensitive ion channel inner membrane domain 1 E3384_04265 IPR010920 LSM domain superfamily E3384_04265 IPR006685 Mechanosensitive ion channel MscS E3384_04265 IPR011066 Mechanosensitive ion channel MscS, C-terminal E3384_04265 IPR023408 Mechanosensitive ion channel MscS domain superfamily E3384_04265 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 E3384_04265 IPR006686 Mechanosensitive ion channel MscS, conserved site E3384_04270 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) E3384_04270 IPR042117 OMPP1/FadL/TodX superfamily E3384_04275 IPR006073 GTP binding domain E3384_04275 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_04280 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_04280 IPR026881 WYL domain E3384_04280 IPR001034 DeoR-type HTH domain E3384_04300 IPR038612 YkfF-like domain superfamily E3384_04300 IPR009253 Protein of unknown function DUF905 E3384_04305 IPR026325 Protein of unknown function DUF932 E3384_04310 IPR042297 Antirestriction domain superfamily E3384_04310 IPR004914 Antirestriction protein E3384_04315 IPR025657 RadC-like JAB domain E3384_04315 IPR001405 Uncharacterised protein family UPF0758 E3384_04315 IPR020891 Uncharacterised protein family UPF0758, conserved site E3384_04315 IPR037518 MPN domain E3384_04320 IPR009329 Protein of unknown function DUF987 E3384_04325 IPR038025 Antitoxin CbeA superfamily E3384_04325 IPR009320 Antitoxin CbeA E3384_04330 IPR009610 CbtA toxin of type IV toxin-antitoxin system E3384_04350 IPR000758 Virulence-related outer membrane protein E3384_04350 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel E3384_04350 IPR027385 Outer membrane protein beta-barrel domain E3384_04360 IPR000259 Fimbrial-type adhesion domain E3384_04360 IPR036937 Fimbrial-type adhesion domain superfamily E3384_04360 IPR008966 Adhesion domain superfamily E3384_04365 IPR037224 PapC, N-terminal domain superfamily E3384_04365 IPR000015 Outer membrane usher protein E3384_04365 IPR025885 PapC, N-terminal domain E3384_04365 IPR025949 PapC-like, C-terminal domain E3384_04365 IPR042186 Outer membrane usher protein FimD, plug domain E3384_04365 IPR018030 Fimbrial membrane usher, conserved site E3384_04370 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_04370 IPR001829 Pili assembly chaperone, bacterial E3384_04370 IPR016148 Pili assembly chaperone, C-terminal E3384_04370 IPR018046 Pili assembly chaperone, conserved site E3384_04370 IPR016147 Pili assembly chaperone, N-terminal E3384_04370 IPR013783 Immunoglobulin-like fold E3384_04370 IPR008962 PapD-like superfamily E3384_04390 IPR011541 Nickel/cobalt transporter, high-affinity E3384_04395 IPR038390 Metal-sensitive transcriptional repressor superfamily E3384_04395 IPR003735 Metal-sensitive transcriptional repressor E3384_04400 IPR018227 Amino acid/polyamine transporter 2 E3384_04410 IPR005119 LysR, substrate-binding E3384_04410 IPR036390 Winged helix DNA-binding domain superfamily E3384_04410 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_04410 IPR000847 Transcription regulator HTH, LysR E3384_04415 IPR002155 Thiolase E3384_04415 IPR016039 Thiolase-like E3384_04415 IPR020615 Thiolase, acyl-enzyme intermediate active site E3384_04415 IPR020610 Thiolase, active site E3384_04415 IPR020617 Thiolase, C-terminal E3384_04415 IPR020613 Thiolase, conserved site E3384_04415 IPR020616 Thiolase, N-terminal E3384_04420 IPR014710 RmlC-like jelly roll fold E3384_04420 IPR007045 5-keto 4-deoxyuronate isomerase E3384_04420 IPR021120 KduI/IolB isomerase E3384_04420 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal E3384_04420 IPR011051 RmlC-like cupin domain superfamily E3384_04425 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase E3384_04425 IPR036291 NAD(P)-binding domain superfamily E3384_04425 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_04425 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_04430 IPR003663 Sugar/inositol transporter E3384_04430 IPR020846 Major facilitator superfamily domain E3384_04430 IPR005828 Major facilitator, sugar transporter-like E3384_04430 IPR005829 Sugar transporter, conserved site E3384_04430 IPR036259 MFS transporter superfamily E3384_04435 IPR001920 Asp/Glu racemase E3384_04435 IPR018187 Asp/Glu racemase, active site 1 E3384_04435 IPR033134 Asp/Glu racemase, active site 2 E3384_04435 IPR015942 Asp/Glu/hydantoin racemase E3384_04435 IPR004380 Aspartate racemase E3384_04440 IPR036390 Winged helix DNA-binding domain superfamily E3384_04440 IPR000847 Transcription regulator HTH, LysR E3384_04440 IPR005119 LysR, substrate-binding E3384_04440 IPR037414 Transcriptional activator protein LysR, PBP2 domain E3384_04440 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_04445 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal E3384_04445 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site E3384_04445 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal E3384_04445 IPR000183 Ornithine/DAP/Arg decarboxylase E3384_04445 IPR029066 PLP-binding barrel E3384_04445 IPR002986 Diaminopimelate decarboxylase, LysA E3384_04445 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal E3384_04445 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site E3384_04450 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_04450 IPR000843 LacI-type HTH domain E3384_04450 IPR028082 Periplasmic binding protein-like I E3384_04455 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_04455 IPR028082 Periplasmic binding protein-like I E3384_04455 IPR000843 LacI-type HTH domain E3384_04460 IPR000873 AMP-dependent synthetase/ligase E3384_04460 IPR002123 Phospholipid/glycerol acyltransferase E3384_04460 IPR042099 AMP-dependent synthetase-like superfamily E3384_04460 IPR023775 Bifunctional protein Aas E3384_04460 IPR020845 AMP-binding, conserved site E3384_04465 IPR036259 MFS transporter superfamily E3384_04465 IPR011701 Major facilitator superfamily E3384_04465 IPR023727 Lysophospholipid transporter LplT E3384_04470 IPR023210 NADP-dependent oxidoreductase domain E3384_04470 IPR036812 NADP-dependent oxidoreductase domain superfamily E3384_04470 IPR020471 Aldo/keto reductase E3384_04475 IPR010920 LSM domain superfamily E3384_04475 IPR010305 Protein of unknown function DUF903 E3384_04480 IPR005496 Integral membrane protein TerC E3384_04485 IPR004230 DNA mismatch repair protein MutH E3384_04485 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II E3384_04485 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily E3384_04485 IPR011335 Restriction endonuclease type II-like E3384_04490 IPR015797 NUDIX hydrolase-like domain superfamily E3384_04490 IPR020084 NUDIX hydrolase, conserved site E3384_04490 IPR020476 NUDIX hydrolase E3384_04490 IPR022927 RNA pyrophosphohydrolase RppH E3384_04490 IPR000086 NUDIX hydrolase domain E3384_04495 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_04495 IPR040442 Pyruvate kinase-like domain superfamily E3384_04495 IPR036618 PtsI, HPr-binding domain superfamily E3384_04495 IPR008731 Phosphotransferase system, enzyme I N-terminal E3384_04495 IPR008279 PEP-utilising enzyme, mobile domain E3384_04495 IPR003018 GAF domain E3384_04495 IPR029016 GAF-like domain superfamily E3384_04495 IPR006318 Phosphotransferase system, enzyme I-like E3384_04495 IPR018274 PEP-utilising enzyme, active site E3384_04495 IPR000121 PEP-utilising enzyme, C-terminal E3384_04495 IPR023151 PEP-utilising enzyme, conserved site E3384_04495 IPR036637 Phosphohistidine domain superfamily E3384_04505 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt E3384_04510 IPR020940 Thymidylate synthase, active site E3384_04510 IPR000398 Thymidylate synthase E3384_04510 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain E3384_04510 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily E3384_04515 IPR012902 Prokaryotic N-terminal methylation site E3384_04520 IPR012902 Prokaryotic N-terminal methylation site E3384_04520 IPR016419 Prepilin peptidase-dependent protein B, predicted E3384_04525 IPR019652 Protein of unknown function DUF2509 E3384_04530 IPR022204 Prepilin peptidase dependent protein C E3384_04530 IPR012902 Prokaryotic N-terminal methylation site E3384_04535 IPR041500 RecC, C-terminal E3384_04535 IPR011335 Restriction endonuclease type II-like E3384_04535 IPR006697 RecBCD enzyme subunit RecC E3384_04535 IPR013986 DExx box DNA helicase domain superfamily E3384_04535 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_04540 IPR007863 Peptidase M16, C-terminal E3384_04540 IPR032632 Peptidase M16, middle/third domain E3384_04540 IPR001431 Peptidase M16, zinc-binding site E3384_04540 IPR011765 Peptidase M16, N-terminal E3384_04540 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like E3384_04545 IPR000212 DNA helicase, UvrD/REP type E3384_04545 IPR011604 Exonuclease, phage-type/RecB, C-terminal E3384_04545 IPR011335 Restriction endonuclease type II-like E3384_04545 IPR014017 UvrD-like DNA helicase, C-terminal E3384_04545 IPR004586 RecBCD enzyme subunit RecB E3384_04545 IPR014016 UvrD-like helicase, ATP-binding domain E3384_04545 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type E3384_04545 IPR034739 UvrD/AddA helicase, N-terminal E3384_04545 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_04550 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_04550 IPR006344 RecBCD enzyme subunit RecD E3384_04550 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain E3384_04550 IPR027785 UvrD-like helicase C-terminal domain E3384_04550 IPR003593 AAA+ ATPase domain E3384_04555 IPR000182 GNAT domain E3384_04555 IPR001048 Aspartate/glutamate/uridylate kinase E3384_04555 IPR036393 Acetylglutamate kinase-like superfamily E3384_04555 IPR016181 Acyl-CoA N-acyltransferase E3384_04555 IPR010167 Amino-acid N-acetyltransferase E3384_04555 IPR033719 N-acetylglutamate synthase, kinase-like domain E3384_04560 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_04560 IPR021731 AMIN domain E3384_04560 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain E3384_04575 IPR010611 3D domain E3384_04575 IPR026044 Membrane-bound lytic murein transglycosylase A E3384_04575 IPR034654 MltA, 3D domain E3384_04575 IPR005300 Lytic transglycosylase MltA, domain B E3384_04575 IPR036908 RlpA-like domain superfamily E3384_04580 IPR035985 Ubiquitin-activating enzyme E3384_04580 IPR000594 THIF-type NAD/FAD binding fold E3384_04585 IPR004626 RarD protein E3384_04585 IPR000620 EamA domain E3384_04590 IPR003808 Fe-S metabolism associated domain, SufE-like E3384_04590 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE E3384_04595 IPR000192 Aminotransferase class V domain E3384_04595 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site E3384_04595 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA E3384_04595 IPR015424 Pyridoxal phosphate-dependent transferase E3384_04595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_04595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_04600 IPR010305 Protein of unknown function DUF903 E3384_04600 IPR010920 LSM domain superfamily E3384_04605 IPR036390 Winged helix DNA-binding domain superfamily E3384_04605 IPR005119 LysR, substrate-binding E3384_04605 IPR000847 Transcription regulator HTH, LysR E3384_04605 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_04610 IPR006696 Protein of unknown function DUF423 E3384_04615 IPR011224 Ribosomal RNA large subunit methyltransferase M E3384_04615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_04615 IPR002877 Ribosomal RNA methyltransferase FtsJ domain E3384_04615 IPR040739 RlmM ferredoxin-like domain E3384_04620 IPR036390 Winged helix DNA-binding domain superfamily E3384_04620 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_04620 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_04620 IPR037171 NagB/RpiA transferase-like E3384_04620 IPR001034 DeoR-type HTH domain E3384_04620 IPR014036 DeoR C-terminal sensor domain E3384_04625 IPR023750 RbsD-like superfamily E3384_04625 IPR023751 L-fucose mutarotase E3384_04625 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU E3384_04630 IPR013450 L-fuculokinase E3384_04630 IPR018484 Carbohydrate kinase, FGGY, N-terminal E3384_04630 IPR000577 Carbohydrate kinase, FGGY E3384_04630 IPR018483 Carbohydrate kinase, FGGY, conserved site E3384_04630 IPR018485 Carbohydrate kinase, FGGY, C-terminal E3384_04635 IPR038393 L-fucose isomerase, domain 3 superfamily E3384_04635 IPR015888 L-fucose isomerase, C-terminal E3384_04635 IPR012889 L-fucose isomerase, N-terminal-2 E3384_04635 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily E3384_04635 IPR038392 L-fucose isomerase, domain 2 superfamily E3384_04635 IPR005763 L-fucose isomerase E3384_04635 IPR038391 L-fucose isomerase, domain 1 superfamily E3384_04635 IPR004216 L-fucose/L-arabinose isomerase, C-terminal E3384_04635 IPR012888 L-fucose isomerase, N-terminal-1 E3384_04640 IPR005275 L-fucose permease FucP E3384_04640 IPR011701 Major facilitator superfamily E3384_04640 IPR020846 Major facilitator superfamily domain E3384_04640 IPR036259 MFS transporter superfamily E3384_04645 IPR004782 L-fucose phosphate aldolase E3384_04645 IPR001303 Class II aldolase/adducin N-terminal E3384_04645 IPR036409 Class II aldolase/adducin N-terminal domain superfamily E3384_04650 IPR039697 Iron-type alcohol dehydrogenase-like E3384_04650 IPR018211 Alcohol dehydrogenase, iron-type, conserved site E3384_04650 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA E3384_04650 IPR013460 Lactaldehyde reductase E3384_04655 IPR036279 5'-3' exonuclease, C-terminal domain superfamily E3384_04655 IPR038969 Flap endonuclease E3384_04655 IPR029060 PIN-like domain superfamily E3384_04655 IPR002421 5'-3' exonuclease, N-terminal E3384_04655 IPR008918 Helix-hairpin-helix motif, class 2 E3384_04655 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal E3384_04655 IPR020045 DNA polymerase I-like, H3TH domain E3384_04655 IPR022895 Flap endonuclease Xni E3384_04660 IPR005131 Serine dehydratase beta chain E3384_04660 IPR029009 Allosteric substrate binding domain superfamily E3384_04660 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form E3384_04660 IPR005130 Serine dehydratase-like, alpha subunit E3384_04665 IPR004694 Hydroxy amino acid transporter E3384_04670 IPR031100 LOG family E3384_04670 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily E3384_04670 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal E3384_04670 IPR021826 Domain of unknown function DUF3412 E3384_04675 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 E3384_04675 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal E3384_04675 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF E3384_04680 IPR009948 Syd E3384_04680 IPR038228 Syd superfamily E3384_04690 IPR036814 YqcC-like superfamily E3384_04690 IPR007384 Protein of unknown function UCP006257 E3384_04690 IPR023376 YqcC-like domain E3384_04695 IPR006145 Pseudouridine synthase, RsuA/RluA E3384_04695 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_04695 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site E3384_04700 IPR029039 Flavoprotein-like superfamily E3384_04700 IPR001094 Flavodoxin-like E3384_04700 IPR008254 Flavodoxin/nitric oxide synthase E3384_04710 IPR036259 MFS transporter superfamily E3384_04710 IPR000849 Sugar phosphate transporter E3384_04710 IPR020846 Major facilitator superfamily domain E3384_04710 IPR011701 Major facilitator superfamily E3384_04715 IPR029017 Enolase-like, N-terminal E3384_04715 IPR034593 Mandelate racemase-like E3384_04715 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal E3384_04715 IPR029065 Enolase C-terminal domain-like E3384_04715 IPR036849 Enolase-like, C-terminal domain superfamily E3384_04715 IPR034598 D-Glucarate dehydratase-like E3384_04715 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain E3384_04715 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site E3384_04720 IPR017653 Glucarate dehydratase E3384_04720 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal E3384_04720 IPR034593 Mandelate racemase-like E3384_04720 IPR036849 Enolase-like, C-terminal domain superfamily E3384_04720 IPR034598 D-Glucarate dehydratase-like E3384_04720 IPR029065 Enolase C-terminal domain-like E3384_04720 IPR029017 Enolase-like, N-terminal E3384_04725 IPR018193 Glycerate kinase, flavodoxin-like fold E3384_04725 IPR036129 Glycerate kinase superfamily E3384_04725 IPR004381 Glycerate kinase E3384_04725 IPR018197 Glycerate kinase, restriction-enzyme-like fold E3384_04730 IPR003594 Histidine kinase/HSP90-like ATPase E3384_04730 IPR003660 HAMP domain E3384_04730 IPR005467 Histidine kinase domain E3384_04730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_04730 IPR019247 Histidine kinase BarA, N-terminal E3384_04730 IPR011006 CheY-like superfamily E3384_04730 IPR036641 HPT domain superfamily E3384_04730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_04730 IPR001789 Signal transduction response regulator, receiver domain E3384_04730 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain E3384_04730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_04730 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_04735 IPR012340 Nucleic acid-binding, OB-fold E3384_04735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_04735 IPR030391 RNA methyltransferase TrmA, conserved site E3384_04735 IPR002792 TRAM domain E3384_04735 IPR010280 (Uracil-5)-methyltransferase family E3384_04735 IPR030390 RNA methyltransferase TrmA, active site E3384_04735 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD E3384_04740 IPR004811 RelA/SpoT family E3384_04740 IPR033655 RelA, TGS domain E3384_04740 IPR012676 TGS-like E3384_04740 IPR004095 TGS E3384_04740 IPR007685 RelA/SpoT E3384_04740 IPR012675 Beta-grasp domain superfamily E3384_04740 IPR002912 ACT domain E3384_04740 IPR003607 HD/PDEase domain E3384_04745 IPR022789 Antitoxin ParD E3384_04745 IPR038296 Antitoxin ParD superfamily E3384_04745 IPR010985 Ribbon-helix-helix E3384_04765 IPR036937 Fimbrial-type adhesion domain superfamily E3384_04765 IPR000259 Fimbrial-type adhesion domain E3384_04765 IPR008966 Adhesion domain superfamily E3384_04775 IPR036937 Fimbrial-type adhesion domain superfamily E3384_04775 IPR000259 Fimbrial-type adhesion domain E3384_04775 IPR008966 Adhesion domain superfamily E3384_04780 IPR016147 Pili assembly chaperone, N-terminal E3384_04780 IPR013783 Immunoglobulin-like fold E3384_04780 IPR008962 PapD-like superfamily E3384_04780 IPR001829 Pili assembly chaperone, bacterial E3384_04780 IPR016148 Pili assembly chaperone, C-terminal E3384_04780 IPR018046 Pili assembly chaperone, conserved site E3384_04780 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_04785 IPR037224 PapC, N-terminal domain superfamily E3384_04785 IPR025885 PapC, N-terminal domain E3384_04785 IPR025949 PapC-like, C-terminal domain E3384_04785 IPR042186 Outer membrane usher protein FimD, plug domain E3384_04785 IPR018030 Fimbrial membrane usher, conserved site E3384_04785 IPR000015 Outer membrane usher protein E3384_04790 IPR036937 Fimbrial-type adhesion domain superfamily E3384_04790 IPR000259 Fimbrial-type adhesion domain E3384_04790 IPR008966 Adhesion domain superfamily E3384_04795 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core E3384_04795 IPR011551 NTP pyrophosphohydrolase MazG E3384_04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_04800 IPR033828 CTP synthase GATase domain E3384_04800 IPR017926 Glutamine amidotransferase E3384_04800 IPR017456 CTP synthase, N-terminal E3384_04800 IPR004468 CTP synthase E3384_04800 IPR029062 Class I glutamine amidotransferase-like E3384_04805 IPR020809 Enolase, conserved site E3384_04805 IPR020811 Enolase, N-terminal E3384_04805 IPR029017 Enolase-like, N-terminal E3384_04805 IPR036849 Enolase-like, C-terminal domain superfamily E3384_04805 IPR000941 Enolase E3384_04805 IPR020810 Enolase, C-terminal TIM barrel domain E3384_04810 IPR013785 Aldolase-type TIM barrel E3384_04810 IPR007197 Radical SAM E3384_04810 IPR024924 7-carboxy-7-deazaguanine synthase-like E3384_04810 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria E3384_04815 IPR000544 Octanoyltransferase E3384_04815 IPR020605 Octanoyltransferase, conserved site E3384_04815 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E3384_04815 IPR001279 Metallo-beta-lactamase E3384_04815 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain E3384_04820 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family E3384_04820 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily E3384_04825 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily E3384_04825 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain E3384_04825 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria E3384_04825 IPR017927 FAD-binding domain, ferredoxin reductase-type E3384_04825 IPR001094 Flavodoxin-like E3384_04825 IPR008254 Flavodoxin/nitric oxide synthase E3384_04825 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase E3384_04825 IPR029039 Flavoprotein-like superfamily E3384_04825 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain E3384_04825 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding E3384_04825 IPR017938 Riboflavin synthase-like beta-barrel E3384_04825 IPR001433 Oxidoreductase FAD/NAD(P)-binding E3384_04830 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain E3384_04830 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily E3384_04830 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain E3384_04830 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit E3384_04830 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site E3384_04835 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase E3384_04835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_04835 IPR011800 Phosphoadenosine phosphosulphate reductase CysH E3384_04835 IPR002500 Phosphoadenosine phosphosulphate reductase E3384_04840 IPR022747 Salmonella outer protein D E3384_04845 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_04845 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_04845 IPR011545 DEAD/DEAH box helicase domain E3384_04845 IPR038257 CRISPR-associated Cas3-type HD domain superfamily E3384_04845 IPR006474 Helicase Cas3, CRISPR-associated, core E3384_04845 IPR035011 CRISPR-associated endonuclease/helicase Cas3 E3384_04845 IPR006483 CRISPR-associated Cas3-type HD domain E3384_04845 IPR001650 Helicase, C-terminal E3384_04850 IPR013381 CRISPR-associated protein Cse1 E3384_04860 IPR010148 CRISPR-associated protein, CT1975 E3384_04865 IPR021124 CRISPR-associated protein, Cas5 E3384_04865 IPR013422 CRISPR-associated protein Cas5, N-terminal E3384_04865 IPR010147 CRISPR-associated protein, CasD E3384_04875 IPR033641 CRISPR-associated protein Cas1, type I-E E3384_04875 IPR002729 CRISPR-associated protein Cas1 E3384_04875 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain E3384_04875 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype E3384_04875 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain E3384_04880 IPR010152 CRISPR-associated protein Cas2 subtype E3384_04885 IPR007484 Peptidase M28 E3384_04890 IPR011784 Sulphate adenylyltransferase, small subunit E3384_04890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_04890 IPR002500 Phosphoadenosine phosphosulphate reductase E3384_04895 IPR005225 Small GTP-binding protein domain E3384_04895 IPR011779 Sulphate adenylyltransferase, large subunit E3384_04895 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal E3384_04895 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain E3384_04895 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_04895 IPR009000 Translation protein, beta-barrel domain superfamily E3384_04895 IPR000795 Transcription factor, GTP-binding domain E3384_04895 IPR031157 Tr-type G domain, conserved site E3384_04900 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_04900 IPR002891 Adenylyl-sulfate kinase E3384_04905 IPR022721 Protein of unknown function DUF3561 E3384_04910 IPR023081 Cell division protein FtsB E3384_04910 IPR007060 Septum formation initiator FtsL/DivIC E3384_04915 IPR029044 Nucleotide-diphospho-sugar transferases E3384_04915 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site E3384_04915 IPR034683 Cytidylyltransferase IspD/TarI E3384_04915 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E3384_04920 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase E3384_04920 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site E3384_04920 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily E3384_04925 IPR011760 Pseudouridine synthase, TruD, insertion domain E3384_04925 IPR001656 Pseudouridine synthase, TruD E3384_04925 IPR020119 Pseudouridine synthase TruD, conserved site E3384_04925 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_04925 IPR042214 Pseudouridine synthase, TruD, catalytic domain E3384_04930 IPR030048 Survival protein SurE E3384_04930 IPR002828 Survival protein SurE-like phosphatase/nucleotidase E3384_04930 IPR036523 SurE-like phosphatase/nucleotidase superfamily E3384_04935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_04935 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase E3384_04940 IPR036779 LysM domain superfamily E3384_04940 IPR018392 LysM domain E3384_04940 IPR011055 Duplicated hybrid motif E3384_04940 IPR016047 Peptidase M23 E3384_04945 IPR012761 RNA polymerase sigma factor RpoS E3384_04945 IPR013324 RNA polymerase sigma factor, region 3/4-like E3384_04945 IPR013325 RNA polymerase sigma factor, region 2 E3384_04945 IPR007630 RNA polymerase sigma-70 region 4 E3384_04945 IPR014284 RNA polymerase sigma-70 like domain E3384_04945 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_04945 IPR007624 RNA polymerase sigma-70 region 3 E3384_04945 IPR000943 RNA polymerase sigma-70 E3384_04945 IPR007627 RNA polymerase sigma-70 region 2 E3384_04945 IPR009042 RNA polymerase sigma-70 region 1.2 E3384_04955 IPR032902 Phenolic acid decarboxylase subunit C E3384_04955 IPR002830 UbiD decarboxylyase family E3384_04960 IPR004507 Flavin prenyltransferase UbiX-like E3384_04960 IPR036551 Flavin prenyltransferase-like E3384_04960 IPR032901 Probable UbiX-like flavin prenyltransferase E3384_04960 IPR003382 Flavoprotein E3384_04965 IPR000835 MarR-type HTH domain E3384_04965 IPR036390 Winged helix DNA-binding domain superfamily E3384_04965 IPR023187 Transcriptional regulator MarR-type, conserved site E3384_04965 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_04970 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_04970 IPR014036 DeoR C-terminal sensor domain E3384_04970 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_04970 IPR036390 Winged helix DNA-binding domain superfamily E3384_04970 IPR001034 DeoR-type HTH domain E3384_04970 IPR037171 NagB/RpiA transferase-like E3384_04975 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding E3384_04975 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site E3384_04975 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_04975 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_04975 IPR015815 3-hydroxyisobutyrate dehydrogenase-related E3384_04975 IPR036291 NAD(P)-binding domain superfamily E3384_04975 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain E3384_04980 IPR042213 Nucleotide-binding, C-terminal domain superfamily E3384_04980 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily E3384_04980 IPR010737 Four-carbon acid sugar kinase, N-terminal domain E3384_04980 IPR031475 Nucleotide-binding C-terminal domain E3384_04985 IPR036409 Class II aldolase/adducin N-terminal domain superfamily E3384_04985 IPR001303 Class II aldolase/adducin N-terminal E3384_04990 IPR036237 Xylose isomerase-like superfamily E3384_04990 IPR013022 Xylose isomerase-like, TIM barrel domain E3384_04990 IPR026040 Hydroxypyruvate isomerase-like E3384_04995 IPR001509 NAD-dependent epimerase/dehydratase E3384_04995 IPR036291 NAD(P)-binding domain superfamily E3384_05000 IPR003474 Gluconate transporter E3384_05005 IPR036390 Winged helix DNA-binding domain superfamily E3384_05005 IPR005119 LysR, substrate-binding E3384_05005 IPR000847 Transcription regulator HTH, LysR E3384_05005 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_05010 IPR004638 Drug resistance transporter EmrB-like E3384_05010 IPR011701 Major facilitator superfamily E3384_05010 IPR005829 Sugar transporter, conserved site E3384_05010 IPR036259 MFS transporter superfamily E3384_05010 IPR020846 Major facilitator superfamily domain E3384_05020 IPR007696 DNA mismatch repair protein MutS, core E3384_05020 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05020 IPR007695 DNA mismatch repair protein MutS-like, N-terminal E3384_05020 IPR017261 DNA mismatch repair protein MutS/MSH E3384_05020 IPR000432 DNA mismatch repair protein MutS, C-terminal E3384_05020 IPR036187 DNA mismatch repair protein MutS, core domain superfamily E3384_05020 IPR016151 DNA mismatch repair protein MutS, N-terminal E3384_05020 IPR005748 DNA mismatch repair protein MutS E3384_05020 IPR007861 DNA mismatch repair protein MutS, clamp E3384_05020 IPR036678 MutS, connector domain superfamily E3384_05020 IPR007860 DNA mismatch repair protein MutS, connector domain E3384_05045 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E3384_05045 IPR029052 Metallo-dependent phosphatase-like E3384_05085 IPR006830 InvH outer membrane lipoprotein E3384_05090 IPR009057 Homeobox-like domain superfamily E3384_05090 IPR018060 DNA binding HTH domain, AraC-type E3384_05090 IPR018062 HTH domain AraC-type, conserved site E3384_05100 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC E3384_05100 IPR010812 Hypersensitivity response secretion-like, HrpJ E3384_05100 IPR003520 Salmonella/Shigella invasion protein E E3384_05105 IPR042193 FHIPEP, domain 3 E3384_05105 IPR001712 Type III secretion system FHIPEP E3384_05105 IPR006302 Type III secretion protein HrcV E3384_05105 IPR042194 FHIPEP, domain 1 E3384_05105 IPR042196 FHIPEP, domain 4 E3384_05105 IPR025505 FHIPEP conserved site E3384_05110 IPR003065 Surface presentation of antigens protein SpaK E3384_05115 IPR040627 T3SS EscN ATPase, C-terminal E3384_05115 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05115 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site E3384_05115 IPR003593 AAA+ ATPase domain E3384_05115 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain E3384_05115 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain E3384_05115 IPR005714 ATPase, type III secretion system, FliI/YscN E3384_05120 IPR002954 Salmonella surface presentation of antigen M protein E3384_05125 IPR003066 Salmonella invasion protein InvJ E3384_05130 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO E3384_05130 IPR003283 Type III secretion system outer membrane, SpaO E3384_05130 IPR036429 SpoA-like superfamily E3384_05130 IPR001543 Surface presentation of antigen (SpoA) E3384_05135 IPR005773 Yop virulence translocation protein R E3384_05135 IPR005838 Type III secretion system inner membrane P protein E3384_05140 IPR006306 Type III secretion protein HrpO E3384_05140 IPR002191 Bacterial export protein family 3 E3384_05145 IPR006304 Type III secretion protein SpaR/YscT E3384_05145 IPR002010 Type III secretion system inner membrane R protein E3384_05150 IPR006307 Type III exporter system, secretion apparatus protein BsaZ E3384_05150 IPR006135 Type III secretion system substrate exporter E3384_05150 IPR029025 Type III secretion system substrate exporter, C-terminal E3384_05155 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD E3384_05155 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup E3384_05155 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_05155 IPR011716 Tetratricopeptide TPR-3 E3384_05160 IPR006972 Secretion system effector C, SseC-like E3384_05160 IPR032391 Invasin IpaB, N-terminal E3384_05160 IPR003895 Type III secretion system, invasin protein B E3384_05165 IPR005427 Salmonella/Shigella invasin protein C E3384_05170 IPR009483 Type III secretion systems tip complex components E3384_05170 IPR036708 BipD-like superfamily E3384_05175 IPR015138 Salmonella invasion protein A, N-terminal E3384_05175 IPR023225 Salmonella invasion protein A, chaperone-binding E3384_05175 IPR023224 Salmonella invasion protein A, C-terminal actin-binding domain superfamily E3384_05180 IPR036736 ACP-like superfamily E3384_05180 IPR009081 Phosphopantetheine binding ACP domain E3384_05190 IPR010261 Tir chaperone protein (CesT) family E3384_05195 IPR015203 SicP binding E3384_05195 IPR016130 Protein-tyrosine phosphatase, active site E3384_05195 IPR003595 Protein-tyrosine phosphatase, catalytic E3384_05195 IPR029021 Protein-tyrosine phosphatase-like E3384_05195 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH E3384_05195 IPR000242 PTP type protein phosphatase E3384_05195 IPR014773 Virulence factor YopE, GAP domain E3384_05195 IPR037168 Virulence factor YopE, GAP domain superfamily E3384_05195 IPR011070 Globular protein, non-globular alpha/beta subunit E3384_05195 IPR000387 Tyrosine specific protein phosphatases domain E3384_05200 IPR008258 Transglycosylase SLT domain 1 E3384_05200 IPR023346 Lysozyme-like domain superfamily E3384_05205 IPR019734 Tetratricopeptide repeat E3384_05205 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_05205 IPR013026 Tetratricopeptide repeat-containing domain E3384_05205 IPR016032 Signal transduction response regulator, C-terminal effector E3384_05205 IPR039420 Transcriptional regulatory protein WalR-like E3384_05205 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_05205 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_05210 IPR020449 Transcription regulator HTH, AraC- type E3384_05210 IPR018062 HTH domain AraC-type, conserved site E3384_05210 IPR018060 DNA binding HTH domain, AraC-type E3384_05210 IPR009057 Homeobox-like domain superfamily E3384_05215 IPR019029 Type III secretion system, PrgH/EprH-like E3384_05215 IPR013387 Type III secretion system, PrgH/EprH E3384_05220 IPR021123 Type III secretion, needle-protein-like E3384_05220 IPR011841 Type III secretion system, needle protein E3384_05220 IPR037203 Type III secretion, needle-protein-like superfamily E3384_05230 IPR006182 Secretory protein YscJ/FliF E3384_05230 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ E3384_05235 IPR013388 Type III secretion apparatus protein OrgA/MxiK E3384_05250 IPR009057 Homeobox-like domain superfamily E3384_05250 IPR018060 DNA binding HTH domain, AraC-type E3384_05250 IPR018062 HTH domain AraC-type, conserved site E3384_05250 IPR020449 Transcription regulator HTH, AraC- type E3384_05265 IPR001626 ABC transporter, TroCD-like E3384_05265 IPR037294 ABC transporter, BtuC-like E3384_05270 IPR037294 ABC transporter, BtuC-like E3384_05270 IPR001626 ABC transporter, TroCD-like E3384_05275 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05275 IPR017871 ABC transporter, conserved site E3384_05275 IPR003439 ABC transporter-like E3384_05275 IPR003593 AAA+ ATPase domain E3384_05280 IPR006127 Periplasmic solute binding protein, ZnuA-like E3384_05280 IPR006128 Adhesion lipoprotein E3384_05280 IPR006129 Adhesin B E3384_05285 IPR020483 Uncharacterised protein family YgbA E3384_05290 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E3384_05290 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_05290 IPR025944 Sigma-54 interaction domain, conserved site E3384_05290 IPR003593 AAA+ ATPase domain E3384_05290 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05290 IPR002197 DNA binding HTH domain, Fis-type E3384_05290 IPR029016 GAF-like domain superfamily E3384_05290 IPR009057 Homeobox-like domain superfamily E3384_05290 IPR003018 GAF domain E3384_05295 IPR016188 PurM-like, N-terminal domain E3384_05295 IPR036676 PurM-like, C-terminal domain superfamily E3384_05295 IPR010918 PurM-like, C-terminal domain E3384_05295 IPR011854 Carbamoyl dehydratase HypE E3384_05295 IPR036921 PurM-like, N-terminal domain superfamily E3384_05300 IPR042243 HypD, domain 2 E3384_05300 IPR042244 HypD, domain 1 E3384_05300 IPR002780 Hydrogenase formation HypD protein E3384_05305 IPR019812 Hydrogenase assembly chaperone, conserved site E3384_05305 IPR037254 HupF/HypC superfamily E3384_05305 IPR001109 Hydrogenase expression/formation protein, HupF/HypC E3384_05310 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05310 IPR004392 Hydrogenase maturation factor HypB E3384_05310 IPR003495 CobW/HypB/UreG, nucleotide-binding domain E3384_05315 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site E3384_05315 IPR000688 Hydrogenase maturation factor HypA/HybF E3384_05320 IPR021285 Transcription regulator, HycA E3384_05325 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_05325 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_05330 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit E3384_05330 IPR003918 NADH:ubiquinone oxidoreductase E3384_05335 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site E3384_05335 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H E3384_05340 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily E3384_05340 IPR029014 [NiFe]-hydrogenase, large subunit E3384_05340 IPR001501 Nickel-dependent hydrogenase, large subunit E3384_05340 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily E3384_05340 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site E3384_05340 IPR001135 NADH-quinone oxidoreductase, subunit D E3384_05340 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit E3384_05345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_05345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_05345 IPR010226 NADH-quinone oxidoreductase, chain I E3384_05350 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit E3384_05350 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit E3384_05355 IPR010005 Formate hydrogenlyase maturation HycH E3384_05360 IPR004420 Peptidase A31, hydrogenase maturation protease HycI E3384_05360 IPR000671 Peptidase A31 family E3384_05360 IPR023430 Peptidase HybD-like domain superfamily E3384_05370 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_05370 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_05375 IPR041440 HypF, Kae1-like domain E3384_05375 IPR036046 Acylphosphatase-like domain superfamily E3384_05375 IPR017968 Acylphosphatase, conserved site E3384_05375 IPR004421 Carbamoyltransferase, HypF-type E3384_05375 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily E3384_05375 IPR006070 YrdC-like domain E3384_05375 IPR011125 Zinc finger, HypF-type E3384_05375 IPR001792 Acylphosphatase-like domain E3384_05380 IPR023753 FAD/NAD(P)-binding domain E3384_05380 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_05380 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase E3384_05380 IPR041364 Rubredoxin binding domain E3384_05385 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin E3384_05385 IPR029039 Flavoprotein-like superfamily E3384_05385 IPR008254 Flavodoxin/nitric oxide synthase E3384_05385 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E3384_05385 IPR024934 Rubredoxin-like domain E3384_05385 IPR001279 Metallo-beta-lactamase E3384_05385 IPR016440 Rubredoxin-oxygen oxidoreductase E3384_05385 IPR024935 Rubredoxin domain E3384_05390 IPR023944 Anaerobic nitric oxide reductase transcription regulator E3384_05390 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E3384_05390 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_05390 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_05390 IPR003593 AAA+ ATPase domain E3384_05390 IPR003018 GAF domain E3384_05390 IPR029016 GAF-like domain superfamily E3384_05390 IPR025944 Sigma-54 interaction domain, conserved site E3384_05390 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05390 IPR009057 Homeobox-like domain superfamily E3384_05395 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type E3384_05395 IPR001347 Sugar isomerase (SIS) E3384_05395 IPR035474 KpsF-like, SIS domain E3384_05395 IPR000644 CBS domain E3384_05400 IPR001034 DeoR-type HTH domain E3384_05400 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_05400 IPR014036 DeoR C-terminal sensor domain E3384_05400 IPR036390 Winged helix DNA-binding domain superfamily E3384_05400 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_05400 IPR037171 NagB/RpiA transferase-like E3384_05405 IPR009693 Glucitol operon activator E3384_05410 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_05410 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_05410 IPR036291 NAD(P)-binding domain superfamily E3384_05415 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component E3384_05415 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily E3384_05415 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup E3384_05420 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II E3384_05420 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal E3384_05420 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal E3384_05425 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor E3384_05430 IPR023346 Lysozyme-like domain superfamily E3384_05430 IPR011757 Lytic transglycosylase MltB E3384_05430 IPR031304 Transglycosylase SLT domain 2 E3384_05440 IPR036653 CinA-like, C-terminal E3384_05440 IPR008136 CinA, C-terminal E3384_05445 IPR023400 DNA recombination and repair protein RecA, C-terminal E3384_05445 IPR003593 AAA+ ATPase domain E3384_05445 IPR013765 DNA recombination and repair protein RecA E3384_05445 IPR020584 DNA recombination/repair protein RecA, conserved site E3384_05445 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05445 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain E3384_05445 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface E3384_05450 IPR003783 Regulatory protein RecX E3384_05450 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_05460 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily E3384_05460 IPR003156 DHHA1 domain E3384_05460 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria E3384_05460 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal E3384_05460 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain E3384_05460 IPR002318 Alanine-tRNA ligase, class IIc E3384_05460 IPR009000 Translation protein, beta-barrel domain superfamily E3384_05460 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily E3384_05460 IPR012947 Threonyl/alanyl tRNA synthetase, SAD E3384_05465 IPR036107 Carbon storage regulator superfamily E3384_05465 IPR003751 Translational regulator CsrA E3384_05495 IPR010976 Beta-phosphoglucomutase hydrolase E3384_05495 IPR006439 HAD hydrolase, subfamily IA E3384_05495 IPR041492 Haloacid dehalogenase-like hydrolase E3384_05495 IPR023214 HAD superfamily E3384_05495 IPR036412 HAD-like superfamily E3384_05495 IPR023198 Phosphoglycolate phosphatase-like, domain 2 E3384_05500 IPR032816 SNARE associated Golgi protein E3384_05505 IPR007370 Glutamate--cysteine ligase E3384_05505 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain E3384_05505 IPR006334 Glutamate--cysteine ligase, monofunctional E3384_05510 IPR003815 S-ribosylhomocysteinase (LuxS) E3384_05510 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily E3384_05510 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like E3384_05520 IPR020846 Major facilitator superfamily domain E3384_05520 IPR036259 MFS transporter superfamily E3384_05520 IPR011701 Major facilitator superfamily E3384_05520 IPR004638 Drug resistance transporter EmrB-like E3384_05525 IPR005694 Efflux pump membrane protein E3384_05525 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain E3384_05530 IPR036390 Winged helix DNA-binding domain superfamily E3384_05530 IPR023187 Transcriptional regulator MarR-type, conserved site E3384_05530 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_05530 IPR000835 MarR-type HTH domain E3384_05535 IPR011701 Major facilitator superfamily E3384_05535 IPR020846 Major facilitator superfamily domain E3384_05535 IPR036259 MFS transporter superfamily E3384_05540 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain E3384_05545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_05545 IPR035906 MetI-like superfamily E3384_05550 IPR005892 Glycine betaine transport ATP-binding subunit E3384_05550 IPR000644 CBS domain E3384_05550 IPR017871 ABC transporter, conserved site E3384_05550 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05550 IPR003593 AAA+ ATPase domain E3384_05550 IPR003439 ABC transporter-like E3384_05555 IPR026494 Ribonucleoside reductase subunit beta, NrdF E3384_05555 IPR012348 Ribonucleotide reductase-like E3384_05555 IPR009078 Ferritin-like superfamily E3384_05555 IPR033909 Ribonucleotide reductase small subunit E3384_05555 IPR000358 Ribonucleotide reductase small subunit family E3384_05555 IPR030475 Ribonucleotide reductase small subunit, acitve site E3384_05560 IPR039718 Ribonucleoside-diphosphate reductase large subunit E3384_05560 IPR013554 Ribonucleotide reductase N-terminal E3384_05560 IPR013346 Ribonucleotide reductase, class I , alpha subunit E3384_05560 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE E3384_05560 IPR000788 Ribonucleotide reductase large subunit, C-terminal E3384_05560 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal E3384_05560 IPR013509 Ribonucleotide reductase large subunit, N-terminal E3384_05565 IPR004465 Ribonucleotide reductase Class Ib, NrdI E3384_05565 IPR029039 Flavoprotein-like superfamily E3384_05565 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial E3384_05570 IPR011909 Glutaredoxin-like protein NrdH E3384_05570 IPR036249 Thioredoxin-like superfamily E3384_05570 IPR002109 Glutaredoxin E3384_05580 IPR003779 Carboxymuconolactone decarboxylase-like E3384_05580 IPR004675 Alkylhydroperoxidase AhpD core E3384_05580 IPR029032 AhpD-like E3384_05585 IPR004839 Aminotransferase, class I/classII E3384_05585 IPR015424 Pyridoxal phosphate-dependent transferase E3384_05585 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_05585 IPR000524 Transcription regulator HTH, GntR E3384_05585 IPR036390 Winged helix DNA-binding domain superfamily E3384_05585 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_05590 IPR010279 Inner membrane protein YqjD/ElaB E3384_05595 IPR018994 Protein of unknown function DUF2002 E3384_05600 IPR010574 L-alanine exporter AlaE E3384_05610 IPR027454 Histone-like protein H-NS, N-terminal E3384_05610 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily E3384_05610 IPR027444 Histone-like protein H-NS, C-terminal domain E3384_05610 IPR001801 Histone-like protein H-NS E3384_05620 IPR036873 Rhodanese-like domain superfamily E3384_05620 IPR021309 Protein of unknown function DUF2892 E3384_05620 IPR001763 Rhodanese-like domain E3384_05625 IPR036390 Winged helix DNA-binding domain superfamily E3384_05625 IPR011991 ArsR-like helix-turn-helix domain E3384_05625 IPR001845 HTH ArsR-type DNA-binding domain E3384_05625 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_05630 IPR000612 Proteolipid membrane potential modulator E3384_05640 IPR014004 Transport-associated and nodulation domain, bacteria E3384_05640 IPR036779 LysM domain superfamily E3384_05640 IPR018392 LysM domain E3384_05640 IPR007055 BON domain E3384_05645 IPR011711 GntR, C-terminal E3384_05645 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_05645 IPR000524 Transcription regulator HTH, GntR E3384_05645 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_05645 IPR036390 Winged helix DNA-binding domain superfamily E3384_05650 IPR004841 Amino acid permease/ SLC12A domain E3384_05650 IPR011265 GABA permease E3384_05650 IPR004840 Amino acid permease, conserved site E3384_05655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_05655 IPR004632 4-aminobutyrate aminotransferase, bacterial E3384_05655 IPR005814 Aminotransferase class-III E3384_05655 IPR015424 Pyridoxal phosphate-dependent transferase E3384_05655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_05660 IPR029510 Aldehyde dehydrogenase, glutamic acid active site E3384_05660 IPR010102 Succinate semialdehyde dehydrogenase E3384_05660 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_05660 IPR016160 Aldehyde dehydrogenase, cysteine active site E3384_05660 IPR016161 Aldehyde/histidinol dehydrogenase E3384_05660 IPR015590 Aldehyde dehydrogenase domain E3384_05660 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_05665 IPR030862 L-2-hydroxyglutarate dehydrogenase E3384_05665 IPR006076 FAD dependent oxidoreductase E3384_05665 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_05670 IPR042098 Taurine dioxygenase TauD-like superfamily E3384_05670 IPR015038 Glutarate 2-hydroxylase GlaH E3384_05675 IPR002823 Protein of unknown function DUF112, transmembrane E3384_05690 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_05690 IPR011006 CheY-like superfamily E3384_05690 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_05690 IPR016032 Signal transduction response regulator, C-terminal effector E3384_05690 IPR001789 Signal transduction response regulator, receiver domain E3384_05690 IPR039420 Transcriptional regulatory protein WalR-like E3384_05695 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_05695 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_05695 IPR013727 Two-component sensor kinase, N-terminal E3384_05695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_05695 IPR005467 Histidine kinase domain E3384_05695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_05695 IPR003660 HAMP domain E3384_05695 IPR003594 Histidine kinase/HSP90-like ATPase E3384_05700 IPR011541 Nickel/cobalt transporter, high-affinity E3384_05700 IPR004688 Transition metal uptake transporter nickel/cobalt E3384_05715 IPR007488 Protein of unknown function DUF535 E3384_05720 IPR001646 Pentapeptide repeat E3384_05730 IPR010917 TonB-dependent receptor, conserved site E3384_05730 IPR039426 Vitamin B12 transporter BtuB-like E3384_05730 IPR010105 TonB-dependent siderophore receptor E3384_05730 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily E3384_05730 IPR012910 TonB-dependent receptor, plug domain E3384_05730 IPR037066 TonB-dependent receptor, plug domain superfamily E3384_05730 IPR000531 TonB-dependent receptor-like, beta-barrel E3384_05735 IPR029058 Alpha/Beta hydrolase fold E3384_05735 IPR000801 Putative esterase E3384_05745 IPR036640 ABC transporter type 1, transmembrane domain superfamily E3384_05745 IPR039421 Type I protein exporter E3384_05745 IPR003439 ABC transporter-like E3384_05745 IPR017871 ABC transporter, conserved site E3384_05745 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05745 IPR003593 AAA+ ATPase domain E3384_05745 IPR011527 ABC transporter type 1, transmembrane domain E3384_05750 IPR030953 Glycosyltransferase, activator-dependent family E3384_05750 IPR010610 Domain of unknown function DUF1205 E3384_05760 IPR009057 Homeobox-like domain superfamily E3384_05760 IPR006118 Recombinase, conserved site E3384_05760 IPR006119 Resolvase, N-terminal catalytic domain E3384_05760 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily E3384_05760 IPR006120 Resolvase, HTH domain E3384_05765 IPR014981 Flagellin D3 E3384_05765 IPR001492 Flagellin E3384_05765 IPR001029 Flagellin, D0/D1 domain E3384_05770 IPR003223 Flagellin phase1 repressor E3384_05810 IPR011010 DNA breaking-rejoining enzyme, catalytic core E3384_05810 IPR013762 Integrase-like, catalytic domain superfamily E3384_05810 IPR002104 Integrase, catalytic domain E3384_05810 IPR038488 Integrase, DNA-binding domain superfamily E3384_05810 IPR025166 Integrase, DNA-binding domain E3384_05810 IPR010998 Integrase/recombinase, N-terminal E3384_05820 IPR010129 Type I secretion membrane fusion protein, HlyD family E3384_05820 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain E3384_05825 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05825 IPR011917 ABC transporter, lipid A export, MsbA E3384_05825 IPR036640 ABC transporter type 1, transmembrane domain superfamily E3384_05825 IPR017871 ABC transporter, conserved site E3384_05825 IPR003439 ABC transporter-like E3384_05825 IPR011527 ABC transporter type 1, transmembrane domain E3384_05825 IPR003593 AAA+ ATPase domain E3384_05840 IPR020081 SsrA-binding protein, conserved site E3384_05840 IPR023620 Small protein B E3384_05840 IPR000037 SsrA-binding protein E3384_05845 IPR023393 START-like domain superfamily E3384_05845 IPR005031 Coenzyme Q-binding protein COQ10, START domain E3384_05850 IPR005346 RnfH protein E3384_05850 IPR037021 RnfH superfamily E3384_05850 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp E3384_05855 IPR026592 Outer membrane protein assembly factor BamE E3384_05855 IPR037873 BamE-like E3384_05855 IPR007450 Lipoprotein SmpA/OmlA E3384_05860 IPR004604 DNA recombination/repair protein RecN E3384_05860 IPR003395 RecF/RecN/SMC, N-terminal E3384_05860 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05865 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal E3384_05865 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily E3384_05865 IPR002504 NAD kinase E3384_05865 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal E3384_05870 IPR000740 GrpE nucleotide exchange factor E3384_05870 IPR013805 GrpE nucleotide exchange factor, coiled-coil E3384_05870 IPR009012 GrpE nucleotide exchange factor, head E3384_05880 IPR000644 CBS domain E3384_05880 IPR002550 CNNM, transmembrane domain E3384_05880 IPR005170 Transporter-associated domain E3384_05880 IPR016169 FAD-binding, type PCMH, subdomain 2 E3384_05880 IPR036318 FAD-binding, type PCMH-like superfamily E3384_05885 IPR002541 Cytochrome c assembly protein E3384_05890 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain E3384_05890 IPR003593 AAA+ ATPase domain E3384_05890 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05890 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily E3384_05890 IPR013822 Signal recognition particle SRP54, helical bundle E3384_05890 IPR004125 Signal recognition particle, SRP54 subunit, M-domain E3384_05890 IPR004780 Signal recognition particle protein E3384_05890 IPR022941 Signal recognition particle, SRP54 subunit E3384_05890 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily E3384_05895 IPR000307 Ribosomal protein S16 E3384_05895 IPR023803 Ribosomal protein S16 domain superfamily E3384_05895 IPR020592 Ribosomal protein S16, conserved site E3384_05900 IPR036976 RimM, N-terminal domain superfamily E3384_05900 IPR002676 RimM, N-terminal E3384_05900 IPR011033 PRC-barrel-like superfamily E3384_05900 IPR011961 16S rRNA processing protein RimM E3384_05900 IPR009000 Translation protein, beta-barrel domain superfamily E3384_05900 IPR027275 PRC-barrel domain E3384_05905 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria E3384_05905 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal E3384_05905 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E3384_05905 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain E3384_05905 IPR029028 Alpha/beta knot methyltransferases E3384_05910 IPR001857 Ribosomal protein L19 E3384_05910 IPR018257 Ribosomal protein L19, conserved site E3384_05910 IPR008991 Translation protein SH3-like domain superfamily E3384_05910 IPR038657 Ribosomal protein L19 superfamily E3384_05915 IPR033417 Periplasmic sensor domain CHASE8 E3384_05915 IPR029787 Nucleotide cyclase E3384_05915 IPR003660 HAMP domain E3384_05915 IPR000160 GGDEF domain E3384_05920 IPR025293 YfiR/HmsC-like E3384_05925 IPR006219 DHAP synthase, class 1 E3384_05925 IPR006218 DAHP synthetase I/KDSA E3384_05925 IPR013785 Aldolase-type TIM barrel E3384_05930 IPR036291 NAD(P)-binding domain superfamily E3384_05930 IPR011277 Chorismate mutase, T-protein E3384_05930 IPR002701 Chorismate mutase II, prokaryotic-type E3384_05930 IPR036979 Chorismate mutase domain superfamily E3384_05930 IPR003099 Prephenate dehydrogenase E3384_05930 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_05930 IPR036263 Chorismate mutase type II superfamily E3384_05930 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein E3384_05935 IPR013658 SMP-30/Gluconolactonase/LRE-like region E3384_05935 IPR011042 Six-bladed beta-propeller, TolB-like E3384_05935 IPR005511 Senescence marker protein-30 (SMP-30) E3384_05940 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase E3384_05940 IPR010952 Chorismate mutase, gammaproteobacteria E3384_05940 IPR018528 Prephenate dehydratase, conserved site E3384_05940 IPR002912 ACT domain E3384_05940 IPR001086 Prephenate dehydratase E3384_05940 IPR036263 Chorismate mutase type II superfamily E3384_05940 IPR036979 Chorismate mutase domain superfamily E3384_05940 IPR002701 Chorismate mutase II, prokaryotic-type E3384_05950 IPR036567 Ribosome hibernation promotion factor-like E3384_05950 IPR003489 Ribosome hibernation promoting factor/RaiA E3384_05960 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_05960 IPR039565 Outer membrane lipoprotein BamD-like E3384_05960 IPR017689 Outer membrane protein assembly factor BamD E3384_05965 IPR036986 RNA-binding S4 domain superfamily E3384_05965 IPR002942 RNA-binding S4 domain E3384_05965 IPR006145 Pseudouridine synthase, RsuA/RluA E3384_05965 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site E3384_05965 IPR006225 Pseudouridine synthase, RluC/RluD E3384_05965 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_05975 IPR018368 ClpA/B, conserved site 1 E3384_05975 IPR001270 ClpA/B family E3384_05975 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_05975 IPR041546 ClpA/ClpB, AAA lid domain E3384_05975 IPR003593 AAA+ ATPase domain E3384_05975 IPR028299 ClpA/B, conserved site 2 E3384_05975 IPR003959 ATPase, AAA-type, core E3384_05975 IPR004176 Clp, N-terminal E3384_05975 IPR017730 Chaperonin ClpB E3384_05975 IPR036628 Clp, N-terminal domain superfamily E3384_05975 IPR019489 Clp ATPase, C-terminal E3384_06005 IPR020846 Major facilitator superfamily domain E3384_06005 IPR005828 Major facilitator, sugar transporter-like E3384_06005 IPR036259 MFS transporter superfamily E3384_06005 IPR004736 MFS transporter, metabolite:H symporter E3384_06005 IPR005829 Sugar transporter, conserved site E3384_06010 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein E3384_06010 IPR017028 Uncharacterised conserved protein UCP034456 E3384_06015 IPR001736 Phospholipase D/Transphosphatidylase E3384_06015 IPR016270 CDP-alcohol phosphatidyltransferase class-II family E3384_06015 IPR025202 Phospholipase D-like domain E3384_06020 IPR016102 Succinyl-CoA synthetase-like E3384_06020 IPR036291 NAD(P)-binding domain superfamily E3384_06020 IPR000182 GNAT domain E3384_06020 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain E3384_06020 IPR003781 CoA-binding E3384_06020 IPR016181 Acyl-CoA N-acyltransferase E3384_06020 IPR013815 ATP-grasp fold, subdomain 1 E3384_06020 IPR011761 ATP-grasp fold E3384_06030 IPR005746 Thioredoxin E3384_06030 IPR036249 Thioredoxin-like superfamily E3384_06030 IPR013766 Thioredoxin domain E3384_06030 IPR017937 Thioredoxin, conserved site E3384_06035 IPR004441 RNA methyltransferase TrmH family E3384_06035 IPR001537 tRNA/rRNA methyltransferase, SpoU type E3384_06035 IPR029064 50S ribosomal protein L30e-like E3384_06035 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E3384_06035 IPR029028 Alpha/beta knot methyltransferases E3384_06035 IPR013123 RNA 2-O ribose methyltransferase, substrate binding E3384_06035 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted E3384_06040 IPR005122 Uracil-DNA glycosylase-like E3384_06040 IPR036895 Uracil-DNA glycosylase-like domain superfamily E3384_06040 IPR002043 Uracil-DNA glycosylase family 1 E3384_06040 IPR018085 Uracil-DNA glycosylase, active site E3384_06045 IPR001150 Glycine radical domain E3384_06045 IPR019777 Formate C-acetyltransferase glycine radical, conserved site E3384_06045 IPR011140 Autonomous glycyl radical cofactor GrcA E3384_06050 IPR001123 Amino acid exporter protein, LeuE-type E3384_06055 IPR000847 Transcription regulator HTH, LysR E3384_06055 IPR036390 Winged helix DNA-binding domain superfamily E3384_06055 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_06055 IPR005119 LysR, substrate-binding E3384_06060 IPR028621 ATP-dependent RNA helicase SrmB E3384_06060 IPR011545 DEAD/DEAH box helicase domain E3384_06060 IPR001650 Helicase, C-terminal E3384_06060 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_06060 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site E3384_06060 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_06060 IPR014014 RNA helicase, DEAD-box type, Q motif E3384_06065 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_06065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_06065 IPR007848 Methyltransferase small domain E3384_06065 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase E3384_06070 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_06070 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily E3384_06070 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain E3384_06070 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal E3384_06070 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily E3384_06070 IPR005288 L-aspartate oxidase E3384_06085 IPR039425 RNA polymerase sigma-70 like E3384_06085 IPR013325 RNA polymerase sigma factor, region 2 E3384_06085 IPR014286 RNA polymerase sigma-70 RpoE type E3384_06085 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 E3384_06085 IPR007627 RNA polymerase sigma-70 region 2 E3384_06085 IPR014284 RNA polymerase sigma-70 like domain E3384_06085 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site E3384_06085 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_06085 IPR013324 RNA polymerase sigma factor, region 3/4-like E3384_06090 IPR005573 Anti sigma-E protein RseA, C-terminal E3384_06090 IPR005572 Anti sigma-E protein RseA, N-terminal E3384_06090 IPR026279 Sigma-E factor negative regulatory protein RseA E3384_06090 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily E3384_06095 IPR033434 MucB/RseB, N-terminal E3384_06095 IPR033436 MucB/RseB, C-terminal E3384_06095 IPR005588 MucB/RseB E3384_06095 IPR038484 MucB/RseB, C-terminal domain superfamily E3384_06100 IPR026268 Protein RseC E3384_06100 IPR007359 Positive regulator of sigma(E), RseC/MucC E3384_06105 IPR031157 Tr-type G domain, conserved site E3384_06105 IPR004161 Translation elongation factor EFTu-like, domain 2 E3384_06105 IPR000640 Elongation factor EFG, domain V-like E3384_06105 IPR035647 EF-G domain III/V-like E3384_06105 IPR006297 Elongation factor 4 E3384_06105 IPR013842 GTP-binding protein LepA, C-terminal E3384_06105 IPR035654 Elongation factor 4, domain IV E3384_06105 IPR038363 LepA, C-terminal domain superfamily E3384_06105 IPR000795 Transcription factor, GTP-binding domain E3384_06105 IPR005225 Small GTP-binding protein domain E3384_06105 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_06110 IPR019757 Peptidase S26A, signal peptidase I, lysine active site E3384_06110 IPR019758 Peptidase S26A, signal peptidase I, conserved site E3384_06110 IPR019756 Peptidase S26A, signal peptidase I, serine active site E3384_06110 IPR000223 Peptidase S26A, signal peptidase I E3384_06110 IPR019533 Peptidase S26 E3384_06110 IPR036286 LexA/Signal peptidase-like superfamily E3384_06115 IPR014720 Double-stranded RNA-binding domain E3384_06115 IPR011907 Ribonuclease III E3384_06115 IPR000999 Ribonuclease III domain E3384_06115 IPR036389 Ribonuclease III, endonuclease domain superfamily E3384_06120 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_06120 IPR009019 K homology domain superfamily, prokaryotic type E3384_06120 IPR004044 K Homology domain, type 2 E3384_06120 IPR015946 K homology domain-like, alpha/beta E3384_06120 IPR006073 GTP binding domain E3384_06120 IPR005662 GTP-binding protein Era E3384_06120 IPR030388 Era-type guanine nucleotide-binding (G) domain E3384_06120 IPR005225 Small GTP-binding protein domain E3384_06125 IPR037278 ARFGAP/RecO-like zinc finger E3384_06125 IPR022572 DNA replication/recombination mediator RecO, N-terminal E3384_06125 IPR012340 Nucleic acid-binding, OB-fold E3384_06125 IPR003717 Recombination protein O, RecO E3384_06130 IPR013785 Aldolase-type TIM barrel E3384_06130 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ E3384_06130 IPR036130 Pyridoxine 5'-phosphate synthase E3384_06135 IPR008278 4'-phosphopantetheinyl transferase domain E3384_06135 IPR004568 Phosphopantetheine-protein transferase domain E3384_06135 IPR002582 Holo-[acyl carrier protein] synthase E3384_06135 IPR037143 4'-phosphopantetheinyl transferase domain superfamily E3384_06140 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_06140 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_06145 IPR036390 Winged helix DNA-binding domain superfamily E3384_06145 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain E3384_06145 IPR005119 LysR, substrate-binding E3384_06145 IPR000847 Transcription regulator HTH, LysR E3384_06145 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_06150 IPR011701 Major facilitator superfamily E3384_06150 IPR020846 Major facilitator superfamily domain E3384_06150 IPR036259 MFS transporter superfamily E3384_06150 IPR026355 Oxalate/formate antiporter E3384_06150 IPR004741 Oxalate/formate antiporter family transporter E3384_06155 IPR036291 NAD(P)-binding domain superfamily E3384_06155 IPR013332 Ketopantoate reductase, N-terminal domain E3384_06155 IPR013752 Ketopantoate reductase, C-terminal domain E3384_06155 IPR003710 Ketopantoate reductase ApbA/PanE E3384_06155 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_06155 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_06160 IPR009057 Homeobox-like domain superfamily E3384_06160 IPR000281 Helix-turn-helix protein RpiR E3384_06160 IPR035472 RpiR-like, SIS domain E3384_06160 IPR001347 Sugar isomerase (SIS) E3384_06160 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_06165 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ E3384_06165 IPR001347 Sugar isomerase (SIS) E3384_06165 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein E3384_06165 IPR005486 Glucokinase regulatory protein, conserved site E3384_06170 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site E3384_06170 IPR001996 Phosphotransferase system, IIB component, type 1 E3384_06170 IPR003352 Phosphotransferase system, EIIC E3384_06170 IPR013013 Phosphotransferase system, EIIC component, type 1 E3384_06170 IPR036878 Glucose permease domain IIB E3384_06175 IPR023214 HAD superfamily E3384_06175 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB E3384_06175 IPR036412 HAD-like superfamily E3384_06180 IPR028883 tRNA-specific adenosine deaminase E3384_06180 IPR002125 Cytidine and deoxycytidylate deaminase domain E3384_06180 IPR016193 Cytidine deaminase-like E3384_06180 IPR016192 APOBEC/CMP deaminase, zinc-binding E3384_06185 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E3384_06185 IPR023703 Membrane-bound lytic murein transglycosylase F E3384_06185 IPR000189 Prokaryotic transglycosylase, active site E3384_06185 IPR023346 Lysozyme-like domain superfamily E3384_06185 IPR008258 Transglycosylase SLT domain 1 E3384_06195 IPR017926 Glutamine amidotransferase E3384_06195 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily E3384_06195 IPR010918 PurM-like, C-terminal domain E3384_06195 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal E3384_06195 IPR010073 Phosphoribosylformylglycinamidine synthase PurL E3384_06195 IPR029062 Class I glutamine amidotransferase-like E3384_06195 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain E3384_06195 IPR036921 PurM-like, N-terminal domain superfamily E3384_06195 IPR036676 PurM-like, C-terminal domain superfamily E3384_06200 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_06200 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_06200 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_06200 IPR005467 Histidine kinase domain E3384_06200 IPR003594 Histidine kinase/HSP90-like ATPase E3384_06200 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_06205 IPR025262 Quorum-sensing regulator protein G E3384_06210 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_06210 IPR009057 Homeobox-like domain superfamily E3384_06210 IPR011006 CheY-like superfamily E3384_06210 IPR001789 Signal transduction response regulator, receiver domain E3384_06210 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_06210 IPR003593 AAA+ ATPase domain E3384_06210 IPR025944 Sigma-54 interaction domain, conserved site E3384_06210 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_06210 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E3384_06215 IPR002332 Nitrogen regulatory protein P-II, urydylation site E3384_06215 IPR002187 Nitrogen regulatory protein PII E3384_06215 IPR017918 Nitrogen regulatory protein PII, conserved site E3384_06215 IPR011322 Nitrogen regulatory PII-like, alpha/beta E3384_06215 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal E3384_06220 IPR020846 Major facilitator superfamily domain E3384_06220 IPR000109 Proton-dependent oligopeptide transporter family E3384_06220 IPR036259 MFS transporter superfamily E3384_06220 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site E3384_06220 IPR005279 Dipeptide/tripeptide permease E3384_06225 IPR015424 Pyridoxal phosphate-dependent transferase E3384_06225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_06225 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily E3384_06225 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal E3384_06225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_06225 IPR011193 Ornithine/lysine/arginine decarboxylase E3384_06225 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal E3384_06225 IPR000310 Orn/Lys/Arg decarboxylase, major domain E3384_06230 IPR002293 Amino acid/polyamine transporter I E3384_06230 IPR004754 Amino acid antiporter E3384_06235 IPR040970 CadC C-terminal domain 1 E3384_06235 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_06235 IPR016032 Signal transduction response regulator, C-terminal effector E3384_06235 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_06235 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_06235 IPR039420 Transcriptional regulatory protein WalR-like E3384_06240 IPR001433 Oxidoreductase FAD/NAD(P)-binding E3384_06240 IPR023950 Flavohemoprotein E3384_06240 IPR012292 Globin/Protoglobin E3384_06240 IPR017927 FAD-binding domain, ferredoxin reductase-type E3384_06240 IPR009050 Globin-like superfamily E3384_06240 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain E3384_06240 IPR017938 Riboflavin synthase-like beta-barrel E3384_06240 IPR000971 Globin E3384_06240 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain E3384_06245 IPR039429 Serine hydroxymethyltransferase-like domain E3384_06245 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site E3384_06245 IPR001085 Serine hydroxymethyltransferase E3384_06245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_06245 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_06245 IPR015424 Pyridoxal phosphate-dependent transferase E3384_06250 IPR036259 MFS transporter superfamily E3384_06250 IPR024989 Major facilitator superfamily associated domain E3384_06250 IPR026032 Probable 3-phenylpropionic acid transporter E3384_06255 IPR036634 PRD domain superfamily E3384_06255 IPR011608 PRD domain E3384_06265 IPR011541 Nickel/cobalt transporter, high-affinity E3384_06270 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site E3384_06270 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_06270 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain E3384_06270 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily E3384_06270 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain E3384_06270 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_06270 IPR014261 Sulphite reductase, subunit C E3384_06275 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain E3384_06275 IPR014260 Sulphite reductase, subunit B E3384_06275 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit E3384_06275 IPR017927 FAD-binding domain, ferredoxin reductase-type E3384_06275 IPR001433 Oxidoreductase FAD/NAD(P)-binding E3384_06275 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain E3384_06275 IPR017938 Riboflavin synthase-like beta-barrel E3384_06280 IPR014259 Sulphite reductase, subunit A E3384_06280 IPR009051 Alpha-helical ferredoxin E3384_06280 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_06280 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_06285 IPR029058 Alpha/Beta hydrolase fold E3384_06285 IPR022742 Serine aminopeptidase, S33 E3384_06290 IPR020550 Inositol monophosphatase, conserved site E3384_06290 IPR022337 Inositol monophosphatase, SuhB E3384_06290 IPR020583 Inositol monophosphatase, metal-binding site E3384_06290 IPR033942 Inositol monophosphatase E3384_06290 IPR000760 Inositol monophosphatase-like E3384_06295 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E3384_06295 IPR029028 Alpha/beta knot methyltransferases E3384_06295 IPR004384 RNA methyltransferase TrmJ/LasT E3384_06295 IPR001537 tRNA/rRNA methyltransferase, SpoU type E3384_06300 IPR030489 Transcription regulator Rrf2-type, conserved site E3384_06300 IPR010242 Transcription factor HTH, IscR E3384_06300 IPR000944 Transcription regulator Rrf2-type E3384_06300 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_06300 IPR036390 Winged helix DNA-binding domain superfamily E3384_06305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_06305 IPR015424 Pyridoxal phosphate-dependent transferase E3384_06305 IPR016454 Cysteine desulfurase E3384_06305 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site E3384_06305 IPR000192 Aminotransferase class V domain E3384_06305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_06305 IPR010240 Cysteine desulfurase IscS E3384_06310 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal E3384_06310 IPR011339 ISC system FeS cluster assembly, IscU scaffold E3384_06315 IPR035903 HesB-like domain superfamily E3384_06315 IPR000361 FeS cluster biogenesis E3384_06315 IPR016092 FeS cluster insertion protein E3384_06315 IPR017870 FeS cluster insertion, C-terminal, conserved site E3384_06315 IPR011302 Iron-binding protein IscA, proteobacteria E3384_06320 IPR001623 DnaJ domain E3384_06320 IPR004640 Co-chaperone Hsc20 E3384_06320 IPR036386 HscB, C-terminal domain superfamily E3384_06320 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain E3384_06320 IPR036869 Chaperone J-domain superfamily E3384_06325 IPR018181 Heat shock protein 70, conserved site E3384_06325 IPR042039 HscA chaperone, nucleotide-binding domain E3384_06325 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily E3384_06325 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily E3384_06325 IPR013126 Heat shock protein 70 family E3384_06325 IPR010236 ISC system FeS cluster assembly, HscA chaperone E3384_06330 IPR036010 2Fe-2S ferredoxin-like superfamily E3384_06330 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E3384_06330 IPR001055 Adrenodoxin E3384_06330 IPR012675 Beta-grasp domain superfamily E3384_06330 IPR018298 Adrenodoxin, iron-sulphur binding site E3384_06330 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria E3384_06335 IPR007479 ISC system FeS cluster assembly, IscX E3384_06335 IPR036762 IscX-like superfamily E3384_06345 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B E3384_06345 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal E3384_06345 IPR008330 Peptidase M17, peptidase B E3384_06345 IPR001346 Interferon regulatory factor DNA-binding domain E3384_06350 IPR009839 SseB protein N-terminal domain E3384_06350 IPR027945 SseB protein, C-terminal E3384_06360 IPR001763 Rhodanese-like domain E3384_06360 IPR036873 Rhodanese-like domain superfamily E3384_06360 IPR001307 Thiosulphate sulfurtransferase, conserved site E3384_06365 IPR002890 Macroglobulin domain E3384_06365 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid E3384_06365 IPR001599 Alpha-2-macroglobulin E3384_06365 IPR011625 Alpha-2-macroglobulin, bait region domain E3384_06365 IPR040639 Alpha-2-macroglobulin, MG1 domain E3384_06365 IPR011626 Alpha-macroglobulin-like, TED domain E3384_06365 IPR026284 Alpha-2-macroglobulin, bacteria E3384_06365 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain E3384_06365 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain E3384_06365 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain E3384_06365 IPR021868 Alpha-2-macroglobulin MG3 domain E3384_06370 IPR001460 Penicillin-binding protein, transpeptidase E3384_06370 IPR036950 Penicillin binding protein transglycosylase domain E3384_06370 IPR011815 Penicillin-binding protein 1C E3384_06370 IPR023346 Lysozyme-like domain superfamily E3384_06370 IPR009647 Penicillin-binding, C-terminal E3384_06370 IPR001264 Glycosyl transferase, family 51 E3384_06370 IPR012338 Beta-lactamase/transpeptidase-like E3384_06375 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE E3384_06375 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_06375 IPR006657 Molybdopterin dinucleotide-binding domain E3384_06375 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_06375 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_06375 IPR006656 Molybdopterin oxidoreductase E3384_06375 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site E3384_06375 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_06375 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_06380 IPR014297 Dimethylsulphoxide reductase, chain B E3384_06380 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_06380 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_06395 IPR001564 Nucleoside diphosphate kinase E3384_06395 IPR034907 Nucleoside diphosphate kinase-like domain E3384_06395 IPR036850 Nucleoside diphosphate kinase-like domain superfamily E3384_06395 IPR023005 Nucleoside diphosphate kinase, active site E3384_06400 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr E3384_06400 IPR013785 Aldolase-type TIM barrel E3384_06400 IPR040072 Methyltransferase (Class A) E3384_06400 IPR027492 Dual-specificity RNA methyltransferase RlmN E3384_06400 IPR007197 Radical SAM E3384_06405 IPR023690 Cytoskeleton protein RodZ E3384_06405 IPR001387 Cro/C1-type helix-turn-helix domain E3384_06405 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_06405 IPR025194 Domain of unknown function DUF4115 E3384_06410 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial E3384_06410 IPR011005 Dihydropteroate synthase-like E3384_06410 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type E3384_06415 IPR015807 Histidine-tRNA ligase E3384_06415 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain E3384_06415 IPR033656 Histidyl-anticodon-binding E3384_06415 IPR036621 Anticodon-binding domain superfamily E3384_06415 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit E3384_06415 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_06415 IPR004154 Anticodon-binding E3384_06420 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_06420 IPR026039 Uncharacterised protein family UPF0070 E3384_06420 IPR018704 Tetratricopeptide repeat-like domain E3384_06425 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat E3384_06425 IPR017687 Outer membrane protein assembly factor BamB E3384_06425 IPR015943 WD40/YVTN repeat-like-containing domain superfamily E3384_06425 IPR002372 Pyrrolo-quinoline quinone repeat E3384_06425 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily E3384_06430 IPR005225 Small GTP-binding protein domain E3384_06430 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_06430 IPR015946 K homology domain-like, alpha/beta E3384_06430 IPR032859 GTPase Der, C-terminal KH-domain-like E3384_06430 IPR016484 GTP-binding protein EngA E3384_06430 IPR006073 GTP binding domain E3384_06430 IPR031166 EngA-type guanine nucleotide-binding (G) domain E3384_06435 IPR029037 YfgJ-like E3384_06435 IPR010807 Protein of unknown function DUF1407 E3384_06440 IPR024519 Inverse autotransporter, beta-domain E3384_06440 IPR016186 C-type lectin-like/link domain superfamily E3384_06440 IPR016187 C-type lectin fold E3384_06440 IPR036779 LysM domain superfamily E3384_06440 IPR018392 LysM domain E3384_06440 IPR003343 Bacterial Ig-like, group 2 E3384_06440 IPR003344 Big-1 (bacterial Ig-like domain 1) domain E3384_06440 IPR008964 Invasin/intimin cell-adhesion fragments E3384_06440 IPR013117 Intimin, C-terminal E3384_06440 IPR003535 Intimin/invasin bacterial adhesion mediator protein E3384_06440 IPR013783 Immunoglobulin-like fold E3384_06440 IPR038177 Inverse autotransporter, beta-domain superfamily E3384_06465 IPR036709 Autotransporter beta-domain superfamily E3384_06465 IPR005546 Autotransporter beta-domain E3384_06465 IPR006315 Outer membrane autotransporter barrel E3384_06465 IPR011050 Pectin lyase fold/virulence factor E3384_06470 IPR020579 Exonuclease VII, large subunit, C-terminal E3384_06470 IPR003753 Exonuclease VII, large subunit E3384_06470 IPR025824 OB-fold nucleic acid binding domain E3384_06475 IPR001093 IMP dehydrogenase/GMP reductase E3384_06475 IPR015875 IMP dehydrogenase / GMP reductase, conserved site E3384_06475 IPR013785 Aldolase-type TIM barrel E3384_06475 IPR000644 CBS domain E3384_06475 IPR005990 Inosine-5'-monophosphate dehydrogenase E3384_06480 IPR025777 GMP synthetase ATP pyrophosphatase domain E3384_06480 IPR029062 Class I glutamine amidotransferase-like E3384_06480 IPR022310 NAD/GMP synthase E3384_06480 IPR022955 GMP synthase E3384_06480 IPR001674 GMP synthase, C-terminal E3384_06480 IPR004739 GMP synthase, glutamine amidotransferase E3384_06480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_06480 IPR017926 Glutamine amidotransferase E3384_06500 IPR022576 Protein of unknown function DUF2633 E3384_06510 IPR001633 EAL domain E3384_06510 IPR035919 EAL domain superfamily E3384_06510 IPR000160 GGDEF domain E3384_06510 IPR007895 MASE1 E3384_06515 IPR022371 Exopolyphosphatase E3384_06515 IPR003695 Ppx/GppA phosphatase E3384_06515 IPR030673 Pyrophosphatase, GppA/Ppx-type E3384_06520 IPR001736 Phospholipase D/Transphosphatidylase E3384_06520 IPR003414 Polyphosphate kinase E3384_06520 IPR041108 Polyphosphate kinase, C-terminal domain 1 E3384_06520 IPR024953 Polyphosphate kinase middle domain E3384_06520 IPR025200 Polyphosphate kinase C-terminal domain 2 E3384_06520 IPR025198 Polyphosphate kinase N-terminal domain E3384_06520 IPR036830 Polyphosphate kinase middle domain superfamily E3384_06520 IPR036832 Polyphosphate kinase N-terminal domain superfamily E3384_06525 IPR001555 Phosphoribosylglycinamide formyltransferase, active site E3384_06525 IPR004607 Phosphoribosylglycinamide formyltransferase E3384_06525 IPR036477 Formyl transferase, N-terminal domain superfamily E3384_06525 IPR002376 Formyl transferase, N-terminal E3384_06530 IPR016188 PurM-like, N-terminal domain E3384_06530 IPR010918 PurM-like, C-terminal domain E3384_06530 IPR036676 PurM-like, C-terminal domain superfamily E3384_06530 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase E3384_06530 IPR036921 PurM-like, N-terminal domain superfamily E3384_06535 IPR000836 Phosphoribosyltransferase domain E3384_06535 IPR029057 Phosphoribosyltransferase-like E3384_06535 IPR034332 Uracil phosphoribosyltransferase, bacterial-type E3384_06535 IPR005765 Uracil phosphoribosyl transferase E3384_06540 IPR029935 Uracil permease E3384_06540 IPR006043 Xanthine/uracil/vitamin C permease E3384_06540 IPR006042 Xanthine/uracil permease E3384_06545 IPR017788 DnaA regulatory inactivator Hda E3384_06545 IPR013317 Chromosomal replication initiator protein DnaA E3384_06545 IPR020591 Chromosomal replication control, initiator DnaA-like E3384_06545 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_06545 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae E3384_06550 IPR006660 Arsenate reductase-like E3384_06550 IPR036249 Thioredoxin-like superfamily E3384_06550 IPR006659 Arsenate reductase E3384_06555 IPR001915 Peptidase M48 E3384_06555 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_06555 IPR030873 Beta-barrel assembly-enhancing protease E3384_06560 IPR002549 Transmembrane protein TqsA-like E3384_06565 IPR008599 Putative sugar diacid recognition E3384_06565 IPR041522 CdaR, GGDEF-like domain E3384_06565 IPR042070 PucR C-terminal helix-turn-helix domain superfamily E3384_06565 IPR025736 PucR C-terminal helix-turn-helix domain E3384_06570 IPR003474 Gluconate transporter E3384_06575 IPR018193 Glycerate kinase, flavodoxin-like fold E3384_06575 IPR018197 Glycerate kinase, restriction-enzyme-like fold E3384_06575 IPR036129 Glycerate kinase superfamily E3384_06575 IPR004381 Glycerate kinase E3384_06580 IPR036249 Thioredoxin-like superfamily E3384_06580 IPR024706 Peroxiredoxin, AhpC-type E3384_06580 IPR013766 Thioredoxin domain E3384_06580 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant E3384_06585 IPR002912 ACT domain E3384_06585 IPR016867 Glycine cleavage system transcriptional repressor E3384_06590 IPR013785 Aldolase-type TIM barrel E3384_06590 IPR002220 DapA-like E3384_06590 IPR020624 Schiff base-forming aldolase, conserved site E3384_06590 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA E3384_06590 IPR020625 Schiff base-forming aldolase, active site E3384_06595 IPR010653 NlpB/DapX lipoprotein E3384_06595 IPR042268 Outer membrane protein assembly factor BamC, C-terminal E3384_06595 IPR014524 Outer membrane protein assembly factor BamC E3384_06600 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase E3384_06600 IPR018236 SAICAR synthetase, conserved site E3384_06600 IPR028923 SAICAR synthetase/ADE2, N-terminal E3384_06600 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase E3384_06605 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative E3384_06610 IPR016181 Acyl-CoA N-acyltransferase E3384_06610 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_06610 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain E3384_06610 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA E3384_06610 IPR007807 Helicase domain E3384_06610 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal E3384_06610 IPR038321 TmcA, C-terminal domain superfamily E3384_06610 IPR032672 TmcA/NAT10/Kre33 E3384_06610 IPR000182 GNAT domain E3384_06615 IPR020910 Uncharacterised protein family UPF0370 E3384_06620 IPR011650 Peptidase M20, dimerisation domain E3384_06620 IPR002933 Peptidase M20 E3384_06620 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria E3384_06620 IPR036264 Bacterial exopeptidase dimerisation domain E3384_06620 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site E3384_06625 IPR006660 Arsenate reductase-like E3384_06625 IPR036249 Thioredoxin-like superfamily E3384_06625 IPR006504 Transcriptional regulator Spx/MgsR E3384_06635 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains E3384_06635 IPR001036 Acriflavin resistance protein E3384_06635 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 E3384_06640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_06640 IPR042295 NarX-like, N-terminal domain superfamily E3384_06640 IPR003660 HAMP domain E3384_06640 IPR003594 Histidine kinase/HSP90-like ATPase E3384_06640 IPR005467 Histidine kinase domain E3384_06640 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing E3384_06640 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain E3384_06640 IPR029095 NarX-like, N-terminal E3384_06645 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_06645 IPR028261 Dihydroprymidine dehydrogenase domain II E3384_06645 IPR023753 FAD/NAD(P)-binding domain E3384_06645 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 E3384_06645 IPR009051 Alpha-helical ferredoxin E3384_06645 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_06645 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_06650 IPR001466 Beta-lactamase-related E3384_06650 IPR012338 Beta-lactamase/transpeptidase-like E3384_06650 IPR022849 Peptidase S12, YfeW/YbbE-like E3384_06655 IPR015797 NUDIX hydrolase-like domain superfamily E3384_06655 IPR004385 Nucleoside diphosphate pyrophosphatase E3384_06655 IPR000086 NUDIX hydrolase domain E3384_06660 IPR009560 Protein of unknown function DUF1176 E3384_06670 IPR005478 Transketolase, bacterial-like E3384_06670 IPR033248 Transketolase, C-terminal domain E3384_06670 IPR029061 Thiamin diphosphate-binding fold E3384_06670 IPR020826 Transketolase binding site E3384_06670 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II E3384_06670 IPR005475 Transketolase-like, pyrimidine-binding domain E3384_06670 IPR033247 Transketolase family E3384_06670 IPR005474 Transketolase, N-terminal E3384_06675 IPR018225 Transaldolase, active site E3384_06675 IPR004730 Transaldolase type 1 E3384_06675 IPR001585 Transaldolase/Fructose-6-phosphate aldolase E3384_06675 IPR013785 Aldolase-type TIM barrel E3384_06680 IPR012302 Malic enzyme, NAD-binding E3384_06680 IPR015884 Malic enzyme, conserved site E3384_06680 IPR036291 NAD(P)-binding domain superfamily E3384_06680 IPR042113 Phosphate acetyltransferase, domain 1 E3384_06680 IPR012301 Malic enzyme, N-terminal domain E3384_06680 IPR042112 Phosphate acetyltransferase, domain 2 E3384_06680 IPR002505 Phosphate acetyl/butaryl transferase E3384_06680 IPR037062 Malic enzyme, N-terminal domain superfamily E3384_06680 IPR012188 NAD(P)-dependent malic enzyme E3384_06685 IPR009307 Ethanolamine utilisation EutS E3384_06685 IPR000249 Microcompartment protein, bacteria E3384_06685 IPR037233 CcmK-like superfamily E3384_06690 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_06690 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV E3384_06695 IPR010424 Ethanolamine utilisation EutQ E3384_06695 IPR014710 RmlC-like jelly roll fold E3384_06695 IPR011051 RmlC-like cupin domain superfamily E3384_06700 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type E3384_06700 IPR036451 Cobalamin adenosyltransferase-like superfamily E3384_06700 IPR016030 Cobalamin adenosyltransferase-like E3384_06705 IPR002505 Phosphate acetyl/butaryl transferase E3384_06705 IPR042112 Phosphate acetyltransferase, domain 2 E3384_06705 IPR012147 Phosphate acetyl/butyryltransferase E3384_06705 IPR042113 Phosphate acetyltransferase, domain 1 E3384_06705 IPR004614 Phosphate acetyltransferase E3384_06710 IPR020808 Bacterial microcompartments protein, conserved site E3384_06710 IPR000249 Microcompartment protein, bacteria E3384_06710 IPR037233 CcmK-like superfamily E3384_06715 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml E3384_06715 IPR036677 EutN/Ccml superfamily E3384_06720 IPR016161 Aldehyde/histidinol dehydrogenase E3384_06720 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_06720 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related E3384_06720 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_06720 IPR015590 Aldehyde dehydrogenase domain E3384_06725 IPR013366 Ethanolamine utilisation EutJ E3384_06730 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA E3384_06730 IPR039697 Iron-type alcohol dehydrogenase-like E3384_06730 IPR018211 Alcohol dehydrogenase, iron-type, conserved site E3384_06735 IPR007441 Ethanolamine utilisation protein EutH E3384_06740 IPR009377 Ethanolamine utilisation EutA E3384_06745 IPR013785 Aldolase-type TIM barrel E3384_06745 IPR010628 Ethanolamine ammonia lyase large subunit E3384_06750 IPR009246 Ethanolamine ammonia-lyase light chain E3384_06750 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal E3384_06750 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal E3384_06755 IPR009193 Polyhedral organelle shell protein, EutL/PduB type E3384_06755 IPR000249 Microcompartment protein, bacteria E3384_06755 IPR037233 CcmK-like superfamily E3384_06755 IPR030983 Ethanolamine utilization protein EutL E3384_06760 IPR020808 Bacterial microcompartments protein, conserved site E3384_06760 IPR037233 CcmK-like superfamily E3384_06760 IPR032298 Ethanolamine utilization protein EutK, C-terminal E3384_06760 IPR000249 Microcompartment protein, bacteria E3384_06760 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_06765 IPR018060 DNA binding HTH domain, AraC-type E3384_06765 IPR009057 Homeobox-like domain superfamily E3384_06765 IPR018062 HTH domain AraC-type, conserved site E3384_06770 IPR015315 Protein of unknown function DUF1963 E3384_06770 IPR035948 YwqG-like superfamily E3384_06780 IPR001260 Coproporphyrinogen III oxidase, aerobic E3384_06780 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily E3384_06780 IPR018375 Coproporphyrinogen III oxidase, conserved site E3384_06785 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain E3384_06790 IPR000182 GNAT domain E3384_06790 IPR023072 Acetyltransferase, YpeA E3384_06790 IPR016181 Acyl-CoA N-acyltransferase E3384_06790 IPR017255 Acetyltransferase, GNAT, predicted E3384_06795 IPR021318 Protein of unknown function DUF2919 E3384_06800 IPR038714 YfeY-like superfamily E3384_06800 IPR010938 Protein of unknown function DUF1131 E3384_06805 IPR011008 Dimeric alpha-beta barrel E3384_06805 IPR006314 Dyp-type peroxidase E3384_06810 IPR036291 NAD(P)-binding domain superfamily E3384_06810 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_06815 IPR005669 Thiosulphate/Sulfate-binding protein E3384_06815 IPR034408 Sulphate/thiosulphate-binding site E3384_06815 IPR000957 Sulphate/thiosulphate-binding, conserved site E3384_06820 IPR035906 MetI-like superfamily E3384_06820 IPR005667 Sulphate ABC transporter permease protein 2 E3384_06820 IPR011865 Sulphate ABC transporter, permease protein CysT E3384_06820 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_06825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_06825 IPR035906 MetI-like superfamily E3384_06825 IPR005667 Sulphate ABC transporter permease protein 2 E3384_06825 IPR011866 Sulphate ABC transporter, permease protein CysW E3384_06830 IPR008995 Molybdate/tungstate binding, C-terminal E3384_06830 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_06830 IPR005666 Sulphate transport system permease protein 1 E3384_06830 IPR017871 ABC transporter, conserved site E3384_06830 IPR003593 AAA+ ATPase domain E3384_06830 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal E3384_06830 IPR003439 ABC transporter-like E3384_06835 IPR005856 Cysteine synthase E3384_06835 IPR005858 Cysteine synthase CysM E3384_06835 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site E3384_06835 IPR001926 Pyridoxal-phosphate dependent enzyme E3384_06835 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme E3384_06840 IPR023346 Lysozyme-like domain superfamily E3384_06840 IPR001264 Glycosyl transferase, family 51 E3384_06840 IPR036950 Penicillin binding protein transglycosylase domain E3384_06845 IPR035242 Protein of unknown function DUF5329 E3384_06850 IPR017926 Glutamine amidotransferase E3384_06850 IPR029062 Class I glutamine amidotransferase-like E3384_06855 IPR004839 Aminotransferase, class I/classII E3384_06855 IPR000524 Transcription regulator HTH, GntR E3384_06855 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_06855 IPR015424 Pyridoxal phosphate-dependent transferase E3384_06855 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_06855 IPR036390 Winged helix DNA-binding domain superfamily E3384_06855 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_06860 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase E3384_06860 IPR004625 Pyridoxine kinase E3384_06860 IPR029056 Ribokinase-like E3384_06860 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase E3384_06870 IPR011055 Duplicated hybrid motif E3384_06870 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 E3384_06875 IPR040442 Pyruvate kinase-like domain superfamily E3384_06875 IPR008279 PEP-utilising enzyme, mobile domain E3384_06875 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_06875 IPR036618 PtsI, HPr-binding domain superfamily E3384_06875 IPR024692 Phosphotransferase system, enzyme I E3384_06875 IPR006318 Phosphotransferase system, enzyme I-like E3384_06875 IPR036637 Phosphohistidine domain superfamily E3384_06875 IPR023151 PEP-utilising enzyme, conserved site E3384_06875 IPR008731 Phosphotransferase system, enzyme I N-terminal E3384_06875 IPR000121 PEP-utilising enzyme, C-terminal E3384_06875 IPR018274 PEP-utilising enzyme, active site E3384_06880 IPR035895 HPr-like superfamily E3384_06880 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site E3384_06880 IPR000032 Phosphocarrier protein HPr-like E3384_06880 IPR002114 Phosphotransferase system, HPr serine phosphorylation site E3384_06885 IPR005856 Cysteine synthase E3384_06885 IPR005859 Cysteine synthase CysK E3384_06885 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme E3384_06885 IPR001926 Pyridoxal-phosphate dependent enzyme E3384_06885 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site E3384_06890 IPR022985 Sulfate transporter CysZ E3384_06895 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily E3384_06895 IPR007449 ZipA, C-terminal FtsZ-binding domain E3384_06895 IPR011919 Cell division protein ZipA E3384_06900 IPR018239 NAD-dependent DNA ligase, active site E3384_06900 IPR041663 DisA/LigA, helix-hairpin-helix motif E3384_06900 IPR036420 BRCT domain superfamily E3384_06900 IPR001357 BRCT domain E3384_06900 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type E3384_06900 IPR004150 NAD-dependent DNA ligase, OB-fold E3384_06900 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 E3384_06900 IPR033136 NAD-dependent DNA ligase, conserved site E3384_06900 IPR013840 NAD-dependent DNA ligase, N-terminal E3384_06900 IPR013839 NAD-dependent DNA ligase, adenylation E3384_06900 IPR001679 NAD-dependent DNA ligase E3384_06900 IPR012340 Nucleic acid-binding, OB-fold E3384_06900 IPR010994 RuvA domain 2-like E3384_06905 IPR024530 Putative quorum-sensing-regulated virulence factor E3384_06910 IPR016833 Putative sodium bile acid cotransporter E3384_06910 IPR038770 Sodium/solute symporter superfamily E3384_06915 IPR005119 LysR, substrate-binding E3384_06915 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_06915 IPR036390 Winged helix DNA-binding domain superfamily E3384_06915 IPR000847 Transcription regulator HTH, LysR E3384_06920 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like E3384_06920 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily E3384_06925 IPR018099 Purine phosphorylase, family 2, conserved site E3384_06925 IPR011268 Purine nucleoside phosphorylase E3384_06925 IPR035994 Nucleoside phosphorylase superfamily E3384_06925 IPR000845 Nucleoside phosphorylase domain E3384_06925 IPR010943 Xanthosine phosphorylase E3384_06930 IPR004740 Nucleoside:H+ symporter E3384_06930 IPR036259 MFS transporter superfamily E3384_06930 IPR020846 Major facilitator superfamily domain E3384_06940 IPR036390 Winged helix DNA-binding domain superfamily E3384_06940 IPR005119 LysR, substrate-binding E3384_06940 IPR000847 Transcription regulator HTH, LysR E3384_06940 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_06940 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain E3384_06960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_06960 IPR033910 Glutamyl-tRNA synthetase E3384_06960 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding E3384_06960 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E3384_06960 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain E3384_06960 IPR000924 Glutamyl/glutaminyl-tRNA synthetase E3384_06960 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial E3384_06960 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 E3384_06965 IPR010749 Protein of unknown function DUF1323 E3384_06965 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_06965 IPR001387 Cro/C1-type helix-turn-helix domain E3384_06965 IPR009061 Putative DNA-binding domain superfamily E3384_06970 IPR009061 Putative DNA-binding domain superfamily E3384_06970 IPR010749 Protein of unknown function DUF1323 E3384_06985 IPR035919 EAL domain superfamily E3384_06985 IPR029787 Nucleotide cyclase E3384_06985 IPR000160 GGDEF domain E3384_06985 IPR007895 MASE1 E3384_06985 IPR001633 EAL domain E3384_06990 IPR008276 Concentrative nucleoside transporter E3384_06990 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial E3384_06990 IPR011657 Concentrative nucleoside transporter C-terminal domain E3384_06990 IPR002668 Concentrative nucleoside transporter N-terminal domain E3384_06990 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain E3384_06995 IPR001046 NRAMP family E3384_07000 IPR019638 Protein of unknown function DUF2502 E3384_07005 IPR036812 NADP-dependent oxidoreductase domain superfamily E3384_07005 IPR023210 NADP-dependent oxidoreductase domain E3384_07010 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme E3384_07010 IPR029061 Thiamin diphosphate-binding fold E3384_07010 IPR012000 Thiamine pyrophosphate enzyme, central domain E3384_07010 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain E3384_07010 IPR000399 TPP-binding enzyme, conserved site E3384_07010 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae E3384_07010 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_07010 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E3384_07015 IPR022969 Chloride channel YfeO E3384_07015 IPR014743 Chloride channel, core E3384_07015 IPR001807 Chloride channel, voltage gated E3384_07020 IPR003836 Glucokinase E3384_07025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_07025 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_07025 IPR015424 Pyridoxal phosphate-dependent transferase E3384_07025 IPR004839 Aminotransferase, class I/classII E3384_07035 IPR004960 Bacterial lipid A biosynthesis acyltransferase E3384_07035 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase E3384_07035 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP E3384_07040 IPR024470 Protein of unknown function DUF2545 E3384_07045 IPR000849 Sugar phosphate transporter E3384_07045 IPR036259 MFS transporter superfamily E3384_07045 IPR020846 Major facilitator superfamily domain E3384_07045 IPR011701 Major facilitator superfamily E3384_07045 IPR005267 Glycerol-3-phosphate transporter E3384_07045 IPR021159 Glycerate/sugar phosphate transporter, conserved site E3384_07055 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_07055 IPR003660 HAMP domain E3384_07055 IPR003594 Histidine kinase/HSP90-like ATPase E3384_07055 IPR017116 Signal transduction histidine kinase, PgtB E3384_07055 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_07055 IPR005467 Histidine kinase domain E3384_07055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_07060 IPR002197 DNA binding HTH domain, Fis-type E3384_07060 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_07060 IPR025944 Sigma-54 interaction domain, conserved site E3384_07060 IPR001789 Signal transduction response regulator, receiver domain E3384_07060 IPR011006 CheY-like superfamily E3384_07060 IPR009057 Homeobox-like domain superfamily E3384_07060 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_07065 IPR020079 Peptidase A26, omptin, conserved site E3384_07065 IPR020080 Outer membrane adhesin/peptidase omptin E3384_07065 IPR000036 Peptidase A26, omptin E3384_07075 IPR000292 Formate/nitrite transporter E3384_07075 IPR023271 Aquaporin-like E3384_07080 IPR007428 MlaA lipoprotein E3384_07085 IPR042117 OMPP1/FadL/TodX superfamily E3384_07085 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) E3384_07090 IPR005272 Conserved hypothetical protein CHP00743 E3384_07090 IPR035571 UPF0234-like, C-terminal E3384_07095 IPR016039 Thiolase-like E3384_07095 IPR020616 Thiolase, N-terminal E3384_07095 IPR020613 Thiolase, conserved site E3384_07095 IPR002155 Thiolase E3384_07095 IPR020615 Thiolase, acyl-enzyme intermediate active site E3384_07095 IPR020610 Thiolase, active site E3384_07095 IPR012806 Acetyl-CoA C-acyltransferase FadI E3384_07095 IPR020617 Thiolase, C-terminal E3384_07100 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal E3384_07100 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding E3384_07100 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site E3384_07100 IPR029045 ClpP/crotonase-like domain superfamily E3384_07100 IPR001753 Enoyl-CoA hydratase/isomerase E3384_07100 IPR012802 Fatty oxidation complex, alpha subunit FadJ E3384_07100 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_07100 IPR036291 NAD(P)-binding domain superfamily E3384_07105 IPR004449 Phosphohistidine phosphatase SixA E3384_07105 IPR013078 Histidine phosphatase superfamily, clade-1 E3384_07105 IPR029033 Histidine phosphatase superfamily E3384_07110 IPR036063 Smr domain superfamily E3384_07110 IPR002625 Smr domain E3384_07110 IPR022990 Uncharacterised protein family UPF0115 E3384_07115 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase E3384_07115 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_07115 IPR004556 Methyltransferase HemK-like E3384_07115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_07115 IPR007848 Methyltransferase small domain E3384_07120 IPR020541 Chorismate synthase, conserved site E3384_07120 IPR000453 Chorismate synthase E3384_07120 IPR035904 Chorismate synthase AroC superfamily E3384_07125 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase E3384_07125 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily E3384_07130 IPR002781 Transmembrane protein TauE-like E3384_07135 IPR007411 Elongation factor P hydroxylase E3384_07140 IPR014987 Uncharacterised protein family YfcL E3384_07145 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal E3384_07145 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC E3384_07145 IPR008471 MnmC-like methyltransferase E3384_07145 IPR006076 FAD dependent oxidoreductase E3384_07145 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_07150 IPR014030 Beta-ketoacyl synthase, N-terminal E3384_07150 IPR000794 Beta-ketoacyl synthase E3384_07150 IPR016039 Thiolase-like E3384_07150 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain E3384_07150 IPR014031 Beta-ketoacyl synthase, C-terminal E3384_07150 IPR018201 Beta-ketoacyl synthase, active site E3384_07155 IPR003675 CAAX prenyl protease 2 E3384_07170 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_07170 IPR038722 Ner, winged helix-turn-helix DNA-binding domain E3384_07180 IPR011701 Major facilitator superfamily E3384_07180 IPR020846 Major facilitator superfamily domain E3384_07180 IPR036259 MFS transporter superfamily E3384_07180 IPR037541 Uncharacterized MFS-type transporter YfcJ E3384_07185 IPR023597 Flagellar regulator Flk E3384_07190 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 E3384_07190 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3384_07190 IPR038251 PdxB, dimerisation domain superfamily E3384_07190 IPR036291 NAD(P)-binding domain superfamily E3384_07190 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain E3384_07190 IPR020921 Erythronate-4-phosphate dehydrogenase E3384_07190 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain E3384_07190 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site E3384_07195 IPR000534 Semialdehyde dehydrogenase, NAD-binding E3384_07195 IPR012280 Semialdehyde dehydrogenase, dimerisation domain E3384_07195 IPR036291 NAD(P)-binding domain superfamily E3384_07200 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain E3384_07200 IPR001406 Pseudouridine synthase I, TruA E3384_07200 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_07200 IPR020095 Pseudouridine synthase I, TruA, C-terminal E3384_07205 IPR032816 SNARE associated Golgi protein E3384_07205 IPR032818 DedA family E3384_07210 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal E3384_07210 IPR034733 Acetyl-CoA carboxylase E3384_07210 IPR041010 Acetyl-coA carboxylase zinc finger domain E3384_07210 IPR029045 ClpP/crotonase-like domain superfamily E3384_07210 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit E3384_07215 IPR004101 Mur ligase, C-terminal E3384_07215 IPR036565 Mur-like, catalytic domain superfamily E3384_07215 IPR001645 Folylpolyglutamate synthetase E3384_07215 IPR036615 Mur ligase, C-terminal domain superfamily E3384_07215 IPR013221 Mur ligase, central E3384_07215 IPR018109 Folylpolyglutamate synthetase, conserved site E3384_07220 IPR032898 Cell division protein DedD E3384_07220 IPR036680 Sporulation-like domain superfamily E3384_07220 IPR007730 Sporulation-like domain E3384_07225 IPR003825 Colicin V production, CvpA E3384_07230 IPR000836 Phosphoribosyltransferase domain E3384_07230 IPR029055 Nucleophile aminohydrolases, N-terminal E3384_07230 IPR017932 Glutamine amidotransferase type 2 domain E3384_07230 IPR035584 Amidophosphoribosyltransferase, N-terminal E3384_07230 IPR005854 Amidophosphoribosyltransferase E3384_07230 IPR029057 Phosphoribosyltransferase-like E3384_07235 IPR009057 Homeobox-like domain superfamily E3384_07235 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_07235 IPR003593 AAA+ ATPase domain E3384_07235 IPR025944 Sigma-54 interaction domain, conserved site E3384_07235 IPR000014 PAS domain E3384_07235 IPR035965 PAS domain superfamily E3384_07235 IPR002197 DNA binding HTH domain, Fis-type E3384_07235 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_07235 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E3384_07235 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_07240 IPR002986 Diaminopimelate decarboxylase, LysA E3384_07240 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal E3384_07240 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site E3384_07240 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site E3384_07240 IPR000183 Ornithine/DAP/Arg decarboxylase E3384_07240 IPR029066 PLP-binding barrel E3384_07240 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal E3384_07240 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal E3384_07245 IPR002293 Amino acid/polyamine transporter I E3384_07250 IPR001608 Alanine racemase, N-terminal E3384_07250 IPR029066 PLP-binding barrel E3384_07255 IPR004841 Amino acid permease/ SLC12A domain E3384_07255 IPR004840 Amino acid permease, conserved site E3384_07260 IPR003382 Flavoprotein E3384_07260 IPR004507 Flavin prenyltransferase UbiX-like E3384_07260 IPR036551 Flavin prenyltransferase-like E3384_07265 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E3384_07265 IPR018313 Solute-binding protein family 3, conserved site E3384_07265 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter E3384_07270 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter E3384_07270 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E3384_07270 IPR018313 Solute-binding protein family 3, conserved site E3384_07275 IPR030199 Histidine transport system permease protein HisQ E3384_07275 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain E3384_07275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_07275 IPR035906 MetI-like superfamily E3384_07280 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_07280 IPR035906 MetI-like superfamily E3384_07280 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain E3384_07285 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_07285 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type E3384_07285 IPR003593 AAA+ ATPase domain E3384_07285 IPR003439 ABC transporter-like E3384_07285 IPR017871 ABC transporter, conserved site E3384_07290 IPR010099 Epimerase family protein SDR39U1 E3384_07290 IPR036291 NAD(P)-binding domain superfamily E3384_07290 IPR013549 Domain of unknown function DUF1731 E3384_07290 IPR001509 NAD-dependent epimerase/dehydratase E3384_07295 IPR004045 Glutathione S-transferase, N-terminal E3384_07295 IPR004046 Glutathione S-transferase, C-terminal E3384_07295 IPR036249 Thioredoxin-like superfamily E3384_07295 IPR036282 Glutathione S-transferase, C-terminal domain superfamily E3384_07295 IPR010987 Glutathione S-transferase, C-terminal-like E3384_07300 IPR010987 Glutathione S-transferase, C-terminal-like E3384_07300 IPR036249 Thioredoxin-like superfamily E3384_07300 IPR004045 Glutathione S-transferase, N-terminal E3384_07300 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal E3384_07300 IPR040079 Glutathione Transferase family E3384_07300 IPR036282 Glutathione S-transferase, C-terminal domain superfamily E3384_07305 IPR041802 YfcE-like, metallophosphatase domain E3384_07305 IPR029052 Metallo-dependent phosphatase-like E3384_07305 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type E3384_07305 IPR020935 Phosphodiesterase YfcE, conserved site E3384_07305 IPR000979 Phosphodiesterase MJ0936/Vps29 E3384_07310 IPR000086 NUDIX hydrolase domain E3384_07310 IPR015797 NUDIX hydrolase-like domain superfamily E3384_07310 IPR024195 NUDIX hydrolase, YfcD, predicted E3384_07315 IPR000843 LacI-type HTH domain E3384_07315 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_07315 IPR028082 Periplasmic binding protein-like I E3384_07320 IPR016152 Phosphotransferase/anion transporter E3384_07320 IPR002178 PTS EIIA type-2 domain E3384_07330 IPR004703 Phosphotransferase system, sugar-specific permease component E3384_07335 IPR005474 Transketolase, N-terminal E3384_07335 IPR029061 Thiamin diphosphate-binding fold E3384_07340 IPR005477 Deoxyxylulose-5-phosphate synthase E3384_07340 IPR029061 Thiamin diphosphate-binding fold E3384_07340 IPR020826 Transketolase binding site E3384_07340 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II E3384_07340 IPR005475 Transketolase-like, pyrimidine-binding domain E3384_07340 IPR005474 Transketolase, N-terminal E3384_07340 IPR033248 Transketolase, C-terminal domain E3384_07345 IPR018385 C4-dicarboxylate anaerobic carrier-like E3384_07350 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily E3384_07350 IPR042112 Phosphate acetyltransferase, domain 2 E3384_07350 IPR042113 Phosphate acetyltransferase, domain 1 E3384_07350 IPR004614 Phosphate acetyltransferase E3384_07350 IPR016475 Phosphate acetyltransferase, bacteria E3384_07350 IPR010766 DRTGG E3384_07350 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_07350 IPR002505 Phosphate acetyl/butaryl transferase E3384_07355 IPR000890 Aliphatic acid kinase, short-chain E3384_07355 IPR004372 Acetate/propionate kinase E3384_07355 IPR023865 Aliphatic acid kinase, short-chain, conserved site E3384_07360 IPR007334 Uncharacterised protein family UPF0208 E3384_07365 IPR023145 YfbU, helix-hairpin domain superfamily E3384_07365 IPR023146 YfbU, alpha-helical bundle domain superfamily E3384_07365 IPR005587 Uncharacterised protein family UPF0304, YfbU E3384_07370 IPR023214 HAD superfamily E3384_07370 IPR036412 HAD-like superfamily E3384_07370 IPR006439 HAD hydrolase, subfamily IA E3384_07370 IPR023198 Phosphoglycolate phosphatase-like, domain 2 E3384_07370 IPR041492 Haloacid dehalogenase-like hydrolase E3384_07375 IPR004680 Citrate transporter-like domain E3384_07375 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily E3384_07375 IPR031312 Sodium/sulphate symporter, conserved site E3384_07375 IPR006037 Regulator of K+ conductance, C-terminal E3384_07385 IPR003607 HD/PDEase domain E3384_07385 IPR039356 Metal-dependent nucleoside 5'-monophosphatase E3384_07385 IPR022971 5'-deoxynucleotidase YfbR E3384_07390 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_07390 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_07390 IPR015424 Pyridoxal phosphate-dependent transferase E3384_07390 IPR004839 Aminotransferase, class I/classII E3384_07395 IPR036390 Winged helix DNA-binding domain superfamily E3384_07395 IPR000847 Transcription regulator HTH, LysR E3384_07395 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_07395 IPR005119 LysR, substrate-binding E3384_07405 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily E3384_07405 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid E3384_07405 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 E3384_07410 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit E3384_07410 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit E3384_07415 IPR010218 NADH dehydrogenase, subunit C E3384_07415 IPR023062 NADH dehydrogenase, subunit CD E3384_07415 IPR001135 NADH-quinone oxidoreductase, subunit D E3384_07415 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily E3384_07415 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily E3384_07415 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site E3384_07415 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H E3384_07415 IPR029014 [NiFe]-hydrogenase, large subunit E3384_07415 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit E3384_07420 IPR036249 Thioredoxin-like superfamily E3384_07420 IPR042128 NuoE domain E3384_07420 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal E3384_07420 IPR002023 NADH-quinone oxidoreductase subunit E-like E3384_07425 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site E3384_07425 IPR011537 NADH ubiquinone oxidoreductase, F subunit E3384_07425 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain E3384_07425 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily E3384_07425 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain E3384_07425 IPR019554 Soluble ligand binding domain E3384_07425 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily E3384_07430 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E3384_07430 IPR010228 NADH:ubiquinone oxidoreductase, subunit G E3384_07430 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site E3384_07430 IPR006656 Molybdopterin oxidoreductase E3384_07430 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding E3384_07430 IPR006657 Molybdopterin dinucleotide-binding domain E3384_07430 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_07430 IPR036010 2Fe-2S ferredoxin-like superfamily E3384_07430 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_07435 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site E3384_07435 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H E3384_07440 IPR010226 NADH-quinone oxidoreductase, chain I E3384_07440 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_07440 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_07445 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ E3384_07445 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 E3384_07450 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like E3384_07450 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K E3384_07455 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 E3384_07455 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit E3384_07455 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal E3384_07455 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup E3384_07460 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit E3384_07460 IPR010227 NADH-quinone oxidoreductase, chain M/4 E3384_07460 IPR003918 NADH:ubiquinone oxidoreductase E3384_07465 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 E3384_07465 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit E3384_07470 IPR002545 CheW-like domain E3384_07470 IPR011006 CheY-like superfamily E3384_07470 IPR001789 Signal transduction response regulator, receiver domain E3384_07470 IPR036061 CheW-like domain superfamily E3384_07470 IPR024181 Chemotaxis response regulator CheV E3384_07475 IPR001279 Metallo-beta-lactamase E3384_07475 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E3384_07475 IPR013469 Ribonuclease BN E3384_07475 IPR013471 Ribonuclease Z/BN E3384_07480 IPR000182 GNAT domain E3384_07480 IPR016181 Acyl-CoA N-acyltransferase E3384_07485 IPR010279 Inner membrane protein YqjD/ElaB E3384_07490 IPR005801 ADC synthase E3384_07490 IPR004561 Isochorismate synthase E3384_07490 IPR034681 Isochorismate synthase MenF E3384_07490 IPR015890 Chorismate-utilising enzyme, C-terminal E3384_07495 IPR029061 Thiamin diphosphate-binding fold E3384_07495 IPR032264 Menaquinone biosynthesis protein MenD, middle domain E3384_07495 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E3384_07495 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase E3384_07495 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain E3384_07500 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase E3384_07500 IPR000073 Alpha/beta hydrolase fold-1 E3384_07500 IPR029058 Alpha/Beta hydrolase fold E3384_07505 IPR014748 Enoyl-CoA hydratase, C-terminal E3384_07505 IPR001753 Enoyl-CoA hydratase/isomerase E3384_07505 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB E3384_07505 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site E3384_07505 IPR029045 ClpP/crotonase-like domain superfamily E3384_07510 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal E3384_07510 IPR036849 Enolase-like, C-terminal domain superfamily E3384_07510 IPR029065 Enolase C-terminal domain-like E3384_07510 IPR029017 Enolase-like, N-terminal E3384_07510 IPR010196 o-Succinylbenzoate synthase, MenC type1 E3384_07515 IPR020845 AMP-binding, conserved site E3384_07515 IPR025110 AMP-binding enzyme, C-terminal domain E3384_07515 IPR000873 AMP-dependent synthetase/ligase E3384_07515 IPR042099 AMP-dependent synthetase-like superfamily E3384_07515 IPR010192 2-succinylbenzoate--CoA ligase E3384_07520 IPR038679 Signal transduction protein PmrD superfamily E3384_07525 IPR000390 Small multidrug resistance protein family E3384_07525 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF E3384_07530 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE E3384_07530 IPR000620 EamA domain E3384_07530 IPR000390 Small multidrug resistance protein family E3384_07535 IPR003342 Glycosyl transferase family 39/83 E3384_07535 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase E3384_07540 IPR002509 NodB homology domain E3384_07540 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable E3384_07540 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel E3384_07545 IPR036291 NAD(P)-binding domain superfamily E3384_07545 IPR001509 NAD-dependent epimerase/dehydratase E3384_07545 IPR005793 Formyl transferase, C-terminal E3384_07545 IPR021168 Bifunctional polymyxin resistance protein, ArnA E3384_07545 IPR002376 Formyl transferase, N-terminal E3384_07545 IPR036477 Formyl transferase, N-terminal domain superfamily E3384_07545 IPR011034 Formyl transferase-like, C-terminal domain superfamily E3384_07550 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase E3384_07550 IPR001173 Glycosyltransferase 2-like E3384_07550 IPR029044 Nucleotide-diphospho-sugar transferases E3384_07555 IPR015424 Pyridoxal phosphate-dependent transferase E3384_07555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_07555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_07555 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase E3384_07555 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB E3384_07560 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase E3384_07560 IPR013078 Histidine phosphatase superfamily, clade-1 E3384_07560 IPR029033 Histidine phosphatase superfamily E3384_07565 IPR023781 Nucleoside triphosphatase NudI E3384_07565 IPR020476 NUDIX hydrolase E3384_07565 IPR015797 NUDIX hydrolase-like domain superfamily E3384_07565 IPR020084 NUDIX hydrolase, conserved site E3384_07565 IPR000086 NUDIX hydrolase domain E3384_07570 IPR023614 Porin domain superfamily E3384_07570 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel E3384_07570 IPR009998 YfaZ E3384_07575 IPR001453 MoaB/Mog domain E3384_07575 IPR036425 MoaB/Mog-like domain superfamily E3384_07575 IPR008135 Competence-induced protein CinA E3384_07575 IPR036653 CinA-like, C-terminal E3384_07580 IPR029016 GAF-like domain superfamily E3384_07580 IPR014757 Transcription regulator IclR, C-terminal E3384_07580 IPR036390 Winged helix DNA-binding domain superfamily E3384_07580 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_07580 IPR005471 Transcription regulator IclR, N-terminal E3384_07585 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal E3384_07585 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain E3384_07585 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site E3384_07585 IPR029065 Enolase C-terminal domain-like E3384_07585 IPR036849 Enolase-like, C-terminal domain superfamily E3384_07585 IPR029017 Enolase-like, N-terminal E3384_07585 IPR023444 L-rhamnonate dehydratase E3384_07590 IPR020846 Major facilitator superfamily domain E3384_07590 IPR011701 Major facilitator superfamily E3384_07590 IPR036259 MFS transporter superfamily E3384_07595 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_07595 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase E3384_07595 IPR005000 HpcH/HpaI aldolase/citrate lyase domain E3384_07595 IPR040442 Pyruvate kinase-like domain superfamily E3384_07600 IPR036425 MoaB/Mog-like domain superfamily E3384_07600 IPR001453 MoaB/Mog domain E3384_07600 IPR008135 Competence-induced protein CinA E3384_07600 IPR036653 CinA-like, C-terminal E3384_07610 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_07610 IPR004017 Cysteine-rich domain E3384_07610 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit E3384_07610 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_07610 IPR009051 Alpha-helical ferredoxin E3384_07615 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_07615 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit E3384_07615 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain E3384_07620 IPR006076 FAD dependent oxidoreductase E3384_07620 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit E3384_07620 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_07620 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily E3384_07620 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase E3384_07620 IPR007419 BFD-like [2Fe-2S]-binding domain E3384_07625 IPR036259 MFS transporter superfamily E3384_07625 IPR021159 Glycerate/sugar phosphate transporter, conserved site E3384_07625 IPR011701 Major facilitator superfamily E3384_07625 IPR000849 Sugar phosphate transporter E3384_07625 IPR005267 Glycerol-3-phosphate transporter E3384_07625 IPR020846 Major facilitator superfamily domain E3384_07630 IPR030395 Glycerophosphodiester phosphodiesterase domain E3384_07630 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily E3384_07635 IPR000847 Transcription regulator HTH, LysR E3384_07635 IPR005119 LysR, substrate-binding E3384_07635 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_07635 IPR036390 Winged helix DNA-binding domain superfamily E3384_07640 IPR020846 Major facilitator superfamily domain E3384_07640 IPR036259 MFS transporter superfamily E3384_07640 IPR011701 Major facilitator superfamily E3384_07645 IPR012675 Beta-grasp domain superfamily E3384_07645 IPR036010 2Fe-2S ferredoxin-like superfamily E3384_07645 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site E3384_07645 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E3384_07650 IPR009078 Ferritin-like superfamily E3384_07650 IPR012348 Ribonucleotide reductase-like E3384_07650 IPR033909 Ribonucleotide reductase small subunit E3384_07650 IPR030475 Ribonucleotide reductase small subunit, acitve site E3384_07650 IPR000358 Ribonucleotide reductase small subunit family E3384_07655 IPR039718 Ribonucleoside-diphosphate reductase large subunit E3384_07655 IPR000788 Ribonucleotide reductase large subunit, C-terminal E3384_07655 IPR013346 Ribonucleotide reductase, class I , alpha subunit E3384_07655 IPR005144 ATP-cone domain E3384_07655 IPR013509 Ribonucleotide reductase large subunit, N-terminal E3384_07655 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal E3384_07660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_07660 IPR010233 Ubiquinone biosynthesis O-methyltransferase E3384_07670 IPR020846 Major facilitator superfamily domain E3384_07670 IPR036259 MFS transporter superfamily E3384_07670 IPR011701 Major facilitator superfamily E3384_07675 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site E3384_07675 IPR034593 Mandelate racemase-like E3384_07675 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal E3384_07675 IPR029065 Enolase C-terminal domain-like E3384_07675 IPR029017 Enolase-like, N-terminal E3384_07675 IPR036849 Enolase-like, C-terminal domain superfamily E3384_07675 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain E3384_07675 IPR023592 D-galactonate dehydratase E3384_07680 IPR013760 DNA topoisomerase, type IIA-like domain superfamily E3384_07680 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily E3384_07680 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta E3384_07680 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal E3384_07680 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal E3384_07680 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat E3384_07680 IPR005743 DNA gyrase, subunit A E3384_07685 IPR030856 Sensor histidine kinase RcsC E3384_07685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_07685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_07685 IPR011006 CheY-like superfamily E3384_07685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_07685 IPR038388 RcsC, C-terminal domain superfamily E3384_07685 IPR003594 Histidine kinase/HSP90-like ATPase E3384_07685 IPR005467 Histidine kinase domain E3384_07685 IPR001789 Signal transduction response regulator, receiver domain E3384_07685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_07685 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal E3384_07690 IPR016032 Signal transduction response regulator, C-terminal effector E3384_07690 IPR030864 Transcriptional regulatory protein RcsB E3384_07690 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_07690 IPR001789 Signal transduction response regulator, receiver domain E3384_07690 IPR000792 Transcription regulator LuxR, C-terminal E3384_07690 IPR011006 CheY-like superfamily E3384_07695 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain E3384_07695 IPR003594 Histidine kinase/HSP90-like ATPase E3384_07695 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily E3384_07695 IPR036641 HPT domain superfamily E3384_07695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_07695 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain E3384_07695 IPR030861 Phosphotransferase RcsD E3384_07695 IPR005467 Histidine kinase domain E3384_07700 IPR023614 Porin domain superfamily E3384_07700 IPR001897 Porin, gammaproteobacterial E3384_07700 IPR013793 Porin, Gram-negative type, conserved site E3384_07700 IPR001702 Porin, Gram-negative type E3384_07705 IPR003374 ApbE-like superfamily E3384_07705 IPR024932 Flavin transferase ApbE E3384_07705 IPR042159 Flavin-trafficking protein ApbE E3384_07710 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain E3384_07710 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain E3384_07710 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding E3384_07710 IPR009057 Homeobox-like domain superfamily E3384_07710 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily E3384_07710 IPR004026 Ada DNA repair, metal-binding E3384_07710 IPR016221 Bifunctional regulatory protein Ada E3384_07710 IPR018062 HTH domain AraC-type, conserved site E3384_07710 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site E3384_07710 IPR018060 DNA binding HTH domain, AraC-type E3384_07710 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_07710 IPR035451 Ada-like domain superfamily E3384_07715 IPR005123 Oxoglutarate/iron-dependent dioxygenase E3384_07715 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily E3384_07715 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like E3384_07715 IPR004574 Alkylated DNA repair protein AlkB E3384_07720 IPR005898 Cyclic peptide transporter E3384_07720 IPR017871 ABC transporter, conserved site E3384_07720 IPR003593 AAA+ ATPase domain E3384_07720 IPR003439 ABC transporter-like E3384_07720 IPR011527 ABC transporter type 1, transmembrane domain E3384_07720 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_07720 IPR036640 ABC transporter type 1, transmembrane domain superfamily E3384_07725 IPR036198 Ecotin superfamily E3384_07725 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria E3384_07725 IPR005658 Proteinase inhibitor I11, ecotin E3384_07725 IPR027438 Ecotin, C-terminal E3384_07730 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_07730 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_07730 IPR004496 Ferredoxin-type protein NapF E3384_07735 IPR005623 Chaperone NapD, nitrate reductase assembly E3384_07740 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_07740 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_07740 IPR006657 Molybdopterin dinucleotide-binding domain E3384_07740 IPR006656 Molybdopterin oxidoreductase E3384_07740 IPR010051 Periplasmic nitrate reductase, large subunit E3384_07740 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_07740 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site E3384_07740 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain E3384_07740 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_07745 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_07745 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_07745 IPR004494 MauM/NapG ferredoxin-type protein E3384_07745 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_07750 IPR011886 Ferredoxin-type protein, NapH/MauN family E3384_07750 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_07750 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_07755 IPR011031 Multihaem cytochrome E3384_07755 IPR036280 Multiheme cytochrome superfamily E3384_07755 IPR005591 Nitrate reductase cytochrome c-type subunit NapB E3384_07760 IPR005126 NapC/NirT cytochrome c, N-terminal E3384_07760 IPR024717 Denitrification system component NapC/NirT/NrfH E3384_07760 IPR038266 NapC/NirT cytochrome c superfamily E3384_07760 IPR036280 Multiheme cytochrome superfamily E3384_07760 IPR011031 Multihaem cytochrome E3384_07760 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT E3384_07765 IPR003593 AAA+ ATPase domain E3384_07765 IPR003439 ABC transporter-like E3384_07765 IPR017871 ABC transporter, conserved site E3384_07765 IPR005895 ABC transporter, haem export, CcmA E3384_07765 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_07770 IPR003544 Cytochrome c-type biogenesis protein CcmB E3384_07770 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria E3384_07775 IPR002541 Cytochrome c assembly protein E3384_07775 IPR003557 Cytochrome c-type biogenesis protein CcmC E3384_07780 IPR007078 Haem exporter protein D (CcmD) E3384_07785 IPR036127 CcmE-like superfamily E3384_07785 IPR004329 CcmE/CycJ protein E3384_07790 IPR003568 Cytochrome c-type biogenesis protein CcmF E3384_07790 IPR003567 Cytochrome c-type biogenesis protein E3384_07790 IPR002541 Cytochrome c assembly protein E3384_07790 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal E3384_07795 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE E3384_07795 IPR013740 Redoxin E3384_07795 IPR036249 Thioredoxin-like superfamily E3384_07795 IPR017937 Thioredoxin, conserved site E3384_07795 IPR013766 Thioredoxin domain E3384_07800 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily E3384_07800 IPR013026 Tetratricopeptide repeat-containing domain E3384_07800 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_07800 IPR005616 CcmH/CycL/Ccl2/NrfF family E3384_07800 IPR019734 Tetratricopeptide repeat E3384_07805 IPR016032 Signal transduction response regulator, C-terminal effector E3384_07805 IPR001789 Signal transduction response regulator, receiver domain E3384_07805 IPR000792 Transcription regulator LuxR, C-terminal E3384_07805 IPR011006 CheY-like superfamily E3384_07820 IPR008969 Carboxypeptidase-like, regulatory domain superfamily E3384_07820 IPR037053 Phage tail collar domain superfamily E3384_07820 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 E3384_07820 IPR011083 Phage tail collar domain E3384_07820 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal E3384_07830 IPR003591 Leucine-rich repeat, typical subtype E3384_07830 IPR032675 Leucine-rich repeat domain superfamily E3384_07830 IPR032674 LRR-containing bacterial E3 ligase, N-terminal E3384_07830 IPR001611 Leucine-rich repeat E3384_07830 IPR029487 Novel E3 ligase domain E3384_07845 IPR024588 Inner membrane protein YejM, N-terminal E3384_07845 IPR012159 Inner membrane protein YejM E3384_07845 IPR000917 Sulfatase, N-terminal E3384_07845 IPR017850 Alkaline-phosphatase-like, core domain superfamily E3384_07850 IPR023202 YejL-like superfamily E3384_07850 IPR009857 Uncharacterised protein family UPF0352 E3384_07855 IPR007358 Nucleoid-associated protein NdpA E3384_07865 IPR029751 Ribosomal protein L25 E3384_07865 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal E3384_07865 IPR020055 Ribosomal protein L25, short-form E3384_07865 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily E3384_07870 IPR006935 Helicase/UvrB, N-terminal E3384_07870 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_07870 IPR011332 Zinc-binding ribosomal protein E3384_07870 IPR001650 Helicase, C-terminal E3384_07870 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_07875 IPR036986 RNA-binding S4 domain superfamily E3384_07875 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain E3384_07875 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_07875 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F E3384_07875 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site E3384_07875 IPR006145 Pseudouridine synthase, RsuA/RluA E3384_07875 IPR002942 RNA-binding S4 domain E3384_07880 IPR011701 Major facilitator superfamily E3384_07880 IPR004812 Drug resistance transporter Bcr/CmlA subfamily E3384_07880 IPR020846 Major facilitator superfamily domain E3384_07880 IPR004734 Multidrug resistance protein E3384_07880 IPR036259 MFS transporter superfamily E3384_07885 IPR020489 Uncharacterised protein family YejG E3384_07890 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_07890 IPR003593 AAA+ ATPase domain E3384_07890 IPR003439 ABC transporter-like E3384_07890 IPR017871 ABC transporter, conserved site E3384_07890 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E3384_07895 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_07895 IPR035906 MetI-like superfamily E3384_07895 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E3384_07900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_07900 IPR035906 MetI-like superfamily E3384_07905 IPR030678 Peptide/nickel binding protein, MppA-type E3384_07905 IPR039424 Solute-binding protein family 5 E3384_07905 IPR000914 Solute-binding protein family 5 domain E3384_07910 IPR035919 EAL domain superfamily E3384_07910 IPR001633 EAL domain E3384_07910 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain E3384_07915 IPR000064 Endopeptidase, NLPC/P60 domain E3384_07915 IPR038765 Papain-like cysteine peptidase superfamily E3384_07920 IPR032908 Lipid A 1-diphosphate synthase E3384_07920 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily E3384_07920 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase E3384_07925 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal E3384_07925 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_07925 IPR003495 CobW/HypB/UreG, nucleotide-binding domain E3384_07930 IPR013185 Translation elongation factor, KOW-like E3384_07930 IPR020599 Translation elongation factor P/YeiP E3384_07930 IPR014722 Ribosomal protein L2, domain 2 E3384_07930 IPR013852 Translation elongation factor P/YeiP, conserved site E3384_07930 IPR008991 Translation protein SH3-like domain superfamily E3384_07930 IPR012340 Nucleic acid-binding, OB-fold E3384_07930 IPR001059 Translation elongation factor P/YeiP, central E3384_07930 IPR015365 Elongation factor P, C-terminal E3384_07930 IPR011897 Translation elongation factor P-like, YeiP E3384_07935 IPR005358 Putative zinc- or iron-chelating domain containing protein E3384_07950 IPR004750 Sugar efflux E3384_07950 IPR036259 MFS transporter superfamily E3384_07950 IPR011701 Major facilitator superfamily E3384_07950 IPR020846 Major facilitator superfamily domain E3384_07955 IPR002114 Phosphotransferase system, HPr serine phosphorylation site E3384_07955 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site E3384_07955 IPR000032 Phosphocarrier protein HPr-like E3384_07955 IPR035895 HPr-like superfamily E3384_07955 IPR016152 Phosphotransferase/anion transporter E3384_07955 IPR002178 PTS EIIA type-2 domain E3384_07960 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_07960 IPR029056 Ribokinase-like E3384_07960 IPR017583 Tagatose/fructose phosphokinase E3384_07960 IPR022463 Fructose 1-phosphate kinase E3384_07960 IPR011611 Carbohydrate kinase PfkB E3384_07965 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_07965 IPR006327 Phosphotransferase system, fructose IIC component E3384_07965 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_07965 IPR036095 PTS system IIB component-like superfamily E3384_07965 IPR013014 Phosphotransferase system, EIIC component, type 2 E3384_07965 IPR003352 Phosphotransferase system, EIIC E3384_07965 IPR003353 Phosphotransferase system, fructose-specific IIB subunit E3384_07970 IPR001719 AP endonuclease 2 E3384_07970 IPR018246 AP endonuclease 2, zinc binding site E3384_07970 IPR013022 Xylose isomerase-like, TIM barrel domain E3384_07970 IPR036237 Xylose isomerase-like superfamily E3384_07975 IPR004630 Uncharacterised protein family UPF0324, bacteria E3384_07975 IPR018383 Uncharacterised protein family UPF0324, prokaryote E3384_07980 IPR005119 LysR, substrate-binding E3384_07980 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_07980 IPR000847 Transcription regulator HTH, LysR E3384_07980 IPR036390 Winged helix DNA-binding domain superfamily E3384_07985 IPR004841 Amino acid permease/ SLC12A domain E3384_07985 IPR004840 Amino acid permease, conserved site E3384_07990 IPR039426 Vitamin B12 transporter BtuB-like E3384_07990 IPR012910 TonB-dependent receptor, plug domain E3384_07990 IPR037066 TonB-dependent receptor, plug domain superfamily E3384_07990 IPR000531 TonB-dependent receptor-like, beta-barrel E3384_07990 IPR010916 TonB box, conserved site E3384_07990 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily E3384_07990 IPR010917 TonB-dependent receptor, conserved site E3384_07995 IPR020846 Major facilitator superfamily domain E3384_07995 IPR036259 MFS transporter superfamily E3384_07995 IPR000849 Sugar phosphate transporter E3384_07995 IPR021159 Glycerate/sugar phosphate transporter, conserved site E3384_07995 IPR011701 Major facilitator superfamily E3384_08000 IPR036412 HAD-like superfamily E3384_08000 IPR023214 HAD superfamily E3384_08000 IPR041449 Phosphoserine phosphatase, N-terminal E3384_08000 IPR023190 Phosphoserine phosphatase, domain 2 E3384_08005 IPR005131 Serine dehydratase beta chain E3384_08005 IPR005130 Serine dehydratase-like, alpha subunit E3384_08005 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form E3384_08005 IPR029009 Allosteric substrate binding domain superfamily E3384_08015 IPR014186 S-formylglutathione hydrolase E3384_08015 IPR000801 Putative esterase E3384_08015 IPR029058 Alpha/Beta hydrolase fold E3384_08020 IPR020602 GTP cyclohydrolase I domain E3384_08020 IPR018234 GTP cyclohydrolase I, conserved site E3384_08020 IPR001474 GTP cyclohydrolase I E3384_08025 IPR007349 Domain of unknown function DUF418 E3384_08030 IPR028082 Periplasmic binding protein-like I E3384_08030 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_08030 IPR000843 LacI-type HTH domain E3384_08035 IPR028082 Periplasmic binding protein-like I E3384_08035 IPR025997 Periplasmic binding protein E3384_08040 IPR003439 ABC transporter-like E3384_08040 IPR017871 ABC transporter, conserved site E3384_08040 IPR015862 ABC transporter, galactose import, MglA E3384_08040 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_08040 IPR003593 AAA+ ATPase domain E3384_08045 IPR030158 Galactoside transport system permease protein MglC E3384_08045 IPR001851 ABC transporter, permease E3384_08050 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_08050 IPR013785 Aldolase-type TIM barrel E3384_08050 IPR005720 Dihydroorotate dehydrogenase domain E3384_08050 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_08055 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_08055 IPR023753 FAD/NAD(P)-binding domain E3384_08055 IPR009051 Alpha-helical ferredoxin E3384_08055 IPR028261 Dihydroprymidine dehydrogenase domain II E3384_08060 IPR020155 Uncharacterised protein family YeiS E3384_08065 IPR023604 Uncharacterised protein family SanA E3384_08065 IPR003848 Domain of unknown function DUF218 E3384_08070 IPR020797 Cytidine deaminase, bacteria E3384_08070 IPR016193 Cytidine deaminase-like E3384_08070 IPR006263 Cytidine deaminase, homodimeric E3384_08070 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain E3384_08070 IPR002125 Cytidine and deoxycytidylate deaminase domain E3384_08070 IPR016192 APOBEC/CMP deaminase, zinc-binding E3384_08075 IPR007300 CidB/LrgB family E3384_08075 IPR005261 Conserved hypothetical protein CHP00659 E3384_08080 IPR005538 LrgA/CidA family E3384_08080 IPR022957 Uncharacterised protein family UPF0299 E3384_08085 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain E3384_08085 IPR005119 LysR, substrate-binding E3384_08085 IPR000847 Transcription regulator HTH, LysR E3384_08085 IPR036390 Winged helix DNA-binding domain superfamily E3384_08085 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_08090 IPR036259 MFS transporter superfamily E3384_08090 IPR020846 Major facilitator superfamily domain E3384_08090 IPR011701 Major facilitator superfamily E3384_08095 IPR011051 RmlC-like cupin domain superfamily E3384_08095 IPR013096 Cupin 2, conserved barrel E3384_08095 IPR014710 RmlC-like jelly roll fold E3384_08100 IPR011234 Fumarylacetoacetase-like, C-terminal E3384_08100 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily E3384_08105 IPR036249 Thioredoxin-like superfamily E3384_08105 IPR010987 Glutathione S-transferase, C-terminal-like E3384_08105 IPR036282 Glutathione S-transferase, C-terminal domain superfamily E3384_08105 IPR040079 Glutathione Transferase family E3384_08105 IPR034330 Glutathione S-transferases, class Zeta , C-terminal E3384_08105 IPR034333 Glutathione S-transferases, class Zeta , N-terminal E3384_08105 IPR004046 Glutathione S-transferase, C-terminal E3384_08105 IPR004045 Glutathione S-transferase, N-terminal E3384_08105 IPR005955 Glutathione S-transferases, class Zeta E3384_08110 IPR002938 FAD-binding domain E3384_08110 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_08115 IPR018517 tRNA-dihydrouridine synthase, conserved site E3384_08115 IPR001269 tRNA-dihydrouridine synthase E3384_08115 IPR013785 Aldolase-type TIM barrel E3384_08115 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal E3384_08115 IPR032886 tRNA-dihydrouridine(16) synthase E3384_08115 IPR035587 DUS-like, FMN-binding domain E3384_08125 IPR003423 Outer membrane efflux protein E3384_08125 IPR010131 RND efflux system, outer membrane lipoprotein, NodT E3384_08130 IPR036291 NAD(P)-binding domain superfamily E3384_08130 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_08130 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_08135 IPR032816 SNARE associated Golgi protein E3384_08140 IPR006977 Yip1 domain E3384_08145 IPR012338 Beta-lactamase/transpeptidase-like E3384_08145 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal E3384_08145 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A E3384_08150 IPR006094 FAD linked oxidase, N-terminal E3384_08150 IPR016169 FAD-binding, type PCMH, subdomain 2 E3384_08150 IPR016166 FAD-binding domain, PCMH-type E3384_08150 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal E3384_08150 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 E3384_08150 IPR012256 D-lactate dehydrogenase E3384_08150 IPR016164 FAD-linked oxidase-like, C-terminal E3384_08150 IPR016167 FAD-binding, type PCMH, subdomain 1 E3384_08150 IPR036318 FAD-binding, type PCMH-like superfamily E3384_08150 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 E3384_08155 IPR001764 Glycoside hydrolase, family 3, N-terminal E3384_08155 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily E3384_08155 IPR002772 Glycoside hydrolase family 3 C-terminal domain E3384_08155 IPR026891 Fibronectin type III-like domain E3384_08155 IPR017853 Glycoside hydrolase superfamily E3384_08155 IPR013783 Immunoglobulin-like fold E3384_08155 IPR019800 Glycoside hydrolase, family 3, active site E3384_08155 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily E3384_08160 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain E3384_08165 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_08165 IPR035906 MetI-like superfamily E3384_08170 IPR003593 AAA+ ATPase domain E3384_08170 IPR003439 ABC transporter-like E3384_08170 IPR017871 ABC transporter, conserved site E3384_08170 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_08175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_08175 IPR035906 MetI-like superfamily E3384_08180 IPR020870 Uncharacterised protein family UPF0387, membrane E3384_08185 IPR009061 Putative DNA-binding domain superfamily E3384_08185 IPR000551 MerR-type HTH domain E3384_08190 IPR010559 Signal transduction histidine kinase, internal region E3384_08190 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_08190 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region E3384_08190 IPR003018 GAF domain E3384_08195 IPR001789 Signal transduction response regulator, receiver domain E3384_08195 IPR007492 LytTR DNA-binding domain E3384_08195 IPR011006 CheY-like superfamily E3384_08200 IPR009921 Domain of unknown function DUF1456 E3384_08210 IPR009736 Protein of unknown function DUF1307 E3384_08210 IPR036699 YehR-like superfamily E3384_08215 IPR015413 Methionyl/Leucyl tRNA synthetase E3384_08215 IPR014758 Methionyl-tRNA synthetase E3384_08215 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain E3384_08215 IPR002547 tRNA-binding domain E3384_08215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_08215 IPR012340 Nucleic acid-binding, OB-fold E3384_08215 IPR033911 Methioninyl-tRNA synthetase core domain E3384_08215 IPR023458 Methionine-tRNA ligase, type 1 E3384_08215 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E3384_08215 IPR029038 Methionyl-tRNA synthetase, Zn-domain E3384_08215 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal E3384_08215 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E3384_08220 IPR019591 Mrp/NBP35 ATP-binding protein E3384_08220 IPR000808 Mrp, conserved site E3384_08220 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_08220 IPR034904 Fe-S cluster assembly domain superfamily E3384_08220 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 E3384_08235 IPR008962 PapD-like superfamily E3384_08235 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_08235 IPR016147 Pili assembly chaperone, N-terminal E3384_08235 IPR013783 Immunoglobulin-like fold E3384_08235 IPR001829 Pili assembly chaperone, bacterial E3384_08235 IPR018046 Pili assembly chaperone, conserved site E3384_08235 IPR016148 Pili assembly chaperone, C-terminal E3384_08240 IPR000015 Outer membrane usher protein E3384_08240 IPR018030 Fimbrial membrane usher, conserved site E3384_08240 IPR025949 PapC-like, C-terminal domain E3384_08240 IPR025885 PapC, N-terminal domain E3384_08240 IPR037224 PapC, N-terminal domain superfamily E3384_08240 IPR042186 Outer membrane usher protein FimD, plug domain E3384_08245 IPR000259 Fimbrial-type adhesion domain E3384_08245 IPR036937 Fimbrial-type adhesion domain superfamily E3384_08245 IPR016959 Uncharacterised conserved protein UCP030811 E3384_08245 IPR008966 Adhesion domain superfamily E3384_08250 IPR024572 Nickel/cobalt homeostasis protein RcnB E3384_08255 IPR000417 Hydroxyethylthiazole kinase E3384_08255 IPR029056 Ribokinase-like E3384_08260 IPR029056 Ribokinase-like E3384_08260 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase E3384_08260 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase E3384_08265 IPR036390 Winged helix DNA-binding domain superfamily E3384_08265 IPR000524 Transcription regulator HTH, GntR E3384_08265 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily E3384_08265 IPR011663 UbiC transcription regulator-associated E3384_08265 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_08270 IPR011611 Carbohydrate kinase PfkB E3384_08270 IPR002139 Ribokinase/fructokinase E3384_08270 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_08270 IPR029056 Ribokinase-like E3384_08275 IPR036705 ADP-ribosylation/Crystallin J1 superfamily E3384_08275 IPR005502 ADP-ribosylation/Crystallin J1 E3384_08280 IPR020846 Major facilitator superfamily domain E3384_08280 IPR036259 MFS transporter superfamily E3384_08280 IPR004740 Nucleoside:H+ symporter E3384_08285 IPR013785 Aldolase-type TIM barrel E3384_08285 IPR002915 DeoC/FbaB/ lacD aldolase E3384_08285 IPR041720 Aldolase FbaB-like, archaeal-type E3384_08290 IPR005218 Diacylglycerol/lipid kinase E3384_08290 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal E3384_08290 IPR022433 Lipid kinase YegS E3384_08290 IPR001206 Diacylglycerol kinase, catalytic domain E3384_08290 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily E3384_08300 IPR010261 Tir chaperone protein (CesT) family E3384_08330 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_08330 IPR001789 Signal transduction response regulator, receiver domain E3384_08330 IPR011006 CheY-like superfamily E3384_08330 IPR016032 Signal transduction response regulator, C-terminal effector E3384_08330 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_08330 IPR039420 Transcriptional regulatory protein WalR-like E3384_08335 IPR003660 HAMP domain E3384_08335 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_08335 IPR003594 Histidine kinase/HSP90-like ATPase E3384_08335 IPR005467 Histidine kinase domain E3384_08335 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_08335 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_08335 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_08340 IPR011701 Major facilitator superfamily E3384_08340 IPR020846 Major facilitator superfamily domain E3384_08340 IPR023721 Multidrug resistance protein MdtD E3384_08340 IPR036259 MFS transporter superfamily E3384_08345 IPR001036 Acriflavin resistance protein E3384_08345 IPR023931 Multidrug resistance protein MdtC E3384_08345 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains E3384_08350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains E3384_08350 IPR001036 Acriflavin resistance protein E3384_08350 IPR022831 Multidrug resistance protein MdtB E3384_08355 IPR022824 Multidrug resistance protein MdtA E3384_08355 IPR039562 Membrane fusion protein, biotin-lipoyl like domain E3384_08355 IPR006143 RND efflux pump, membrane fusion protein E3384_08365 IPR013126 Heat shock protein 70 family E3384_08365 IPR042054 YegD-like E3384_08365 IPR018181 Heat shock protein 70, conserved site E3384_08370 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily E3384_08370 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal E3384_08370 IPR011257 DNA glycosylase E3384_08370 IPR003265 HhH-GPD domain E3384_08370 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal E3384_08370 IPR000035 Alkylbase DNA glycosidase, conserved site E3384_08375 IPR035965 PAS domain superfamily E3384_08375 IPR029787 Nucleotide cyclase E3384_08375 IPR000160 GGDEF domain E3384_08375 IPR007895 MASE1 E3384_08375 IPR001610 PAC motif E3384_08375 IPR000014 PAS domain E3384_08375 IPR013656 PAS fold-4 E3384_08375 IPR013655 PAS fold-3 E3384_08375 IPR000700 PAS-associated, C-terminal E3384_08375 IPR001633 EAL domain E3384_08375 IPR035919 EAL domain superfamily E3384_08380 IPR000764 Uridine kinase-like E3384_08380 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_08380 IPR006083 Phosphoribulokinase/uridine kinase E3384_08380 IPR026008 Uridine kinase E3384_08385 IPR033704 dUTPase, trimeric E3384_08385 IPR011962 dCTP deaminase E3384_08385 IPR036157 dUTPase-like superfamily E3384_08385 IPR029054 dUTPase-like E3384_08390 IPR007844 AsmA E3384_08395 IPR000644 CBS domain E3384_08395 IPR005170 Transporter-associated domain E3384_08395 IPR016169 FAD-binding, type PCMH, subdomain 2 E3384_08395 IPR005496 Integral membrane protein TerC E3384_08395 IPR036318 FAD-binding, type PCMH-like superfamily E3384_08400 IPR003715 Polysaccharide export protein E3384_08400 IPR019554 Soluble ligand binding domain E3384_08400 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain E3384_08405 IPR023485 Phosphotyrosine protein phosphatase I E3384_08405 IPR036196 Phosphotyrosine protein phosphatase I superfamily E3384_08405 IPR017867 Protein-tyrosine phosphatase, low molecular weight E3384_08410 IPR005702 Exopolysaccharide synthesis protein E3384_08410 IPR032807 Tyrosine kinase, G-rich domain E3384_08410 IPR003856 Polysaccharide chain length determinant N-terminal domain E3384_08410 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_08410 IPR025669 AAA domain E3384_08415 IPR001173 Glycosyltransferase 2-like E3384_08415 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA E3384_08415 IPR029044 Nucleotide-diphospho-sugar transferases E3384_08420 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB E3384_08420 IPR001451 Hexapeptide repeat E3384_08420 IPR018357 Hexapeptide transferase, conserved site E3384_08420 IPR011004 Trimeric LpxA-like superfamily E3384_08420 IPR005881 Serine O-acetyltransferase E3384_08425 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain E3384_08425 IPR001296 Glycosyl transferase, family 1 E3384_08425 IPR023916 Colanic acid biosynthesis, glycosyl transferase, WcaC E3384_08430 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD E3384_08435 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE E3384_08435 IPR001173 Glycosyltransferase 2-like E3384_08435 IPR029044 Nucleotide-diphospho-sugar transferases E3384_08440 IPR018357 Hexapeptide transferase, conserved site E3384_08440 IPR001451 Hexapeptide repeat E3384_08440 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF E3384_08440 IPR011004 Trimeric LpxA-like superfamily E3384_08445 IPR036291 NAD(P)-binding domain superfamily E3384_08445 IPR006368 GDP-mannose 4,6-dehydratase E3384_08445 IPR016040 NAD(P)-binding domain E3384_08450 IPR001509 NAD-dependent epimerase/dehydratase E3384_08450 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase E3384_08450 IPR036291 NAD(P)-binding domain superfamily E3384_08455 IPR033715 GDP-mannose mannosyl hydrolase E3384_08455 IPR020084 NUDIX hydrolase, conserved site E3384_08455 IPR015797 NUDIX hydrolase-like domain superfamily E3384_08455 IPR000086 NUDIX hydrolase domain E3384_08455 IPR028613 GDP-mannose mannosyl hydrolase, Enterobacteria E3384_08460 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain E3384_08460 IPR001296 Glycosyl transferase, family 1 E3384_08460 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI E3384_08465 IPR029044 Nucleotide-diphospho-sugar transferases E3384_08465 IPR005835 Nucleotidyl transferase domain E3384_08465 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal E3384_08465 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase E3384_08465 IPR014710 RmlC-like jelly roll fold E3384_08465 IPR011051 RmlC-like cupin domain superfamily E3384_08470 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I E3384_08470 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III E3384_08470 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II E3384_08470 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III E3384_08470 IPR005843 Alpha-D-phosphohexomutase, C-terminal E3384_08470 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily E3384_08470 IPR016066 Alpha-D-phosphohexomutase, conserved site E3384_08470 IPR005841 Alpha-D-phosphohexomutase superfamily E3384_08475 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ E3384_08475 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase E3384_08475 IPR003362 Bacterial sugar transferase E3384_08485 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK E3384_08485 IPR007345 Polysaccharide pyruvyl transferase E3384_08490 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain E3384_08490 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL E3384_08490 IPR001296 Glycosyl transferase, family 1 E3384_08495 IPR023882 Colanic acid biosynthesis WcaM E3384_08495 IPR012334 Pectin lyase fold E3384_08495 IPR011050 Pectin lyase fold/virulence factor E3384_08495 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_08500 IPR029044 Nucleotide-diphospho-sugar transferases E3384_08500 IPR005835 Nucleotidyl transferase domain E3384_08500 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type E3384_08500 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit E3384_08515 IPR015397 Glycosyl transferase 1, domain A E3384_08515 IPR001296 Glycosyl transferase, family 1 E3384_08525 IPR018247 EF-Hand 1, calcium-binding site E3384_08525 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase E3384_08525 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal E3384_08525 IPR005835 Nucleotidyl transferase domain E3384_08525 IPR029044 Nucleotide-diphospho-sugar transferases E3384_08525 IPR014710 RmlC-like jelly roll fold E3384_08525 IPR011051 RmlC-like cupin domain superfamily E3384_08530 IPR016066 Alpha-D-phosphohexomutase, conserved site E3384_08530 IPR005841 Alpha-D-phosphohexomutase superfamily E3384_08530 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I E3384_08530 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III E3384_08530 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II E3384_08530 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III E3384_08530 IPR005843 Alpha-D-phosphohexomutase, C-terminal E3384_08530 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily E3384_08540 IPR006183 6-phosphogluconate dehydrogenase E3384_08540 IPR036291 NAD(P)-binding domain superfamily E3384_08540 IPR006114 6-phosphogluconate dehydrogenase, C-terminal E3384_08540 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding E3384_08540 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating E3384_08540 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_08540 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_08540 IPR006184 6-phosphogluconate-binding site E3384_08545 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type E3384_08545 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation E3384_08545 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily E3384_08545 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal E3384_08545 IPR036291 NAD(P)-binding domain superfamily E3384_08545 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_08545 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal E3384_08545 IPR017476 UDP-glucose/GDP-mannose dehydrogenase E3384_08550 IPR003856 Polysaccharide chain length determinant N-terminal domain E3384_08555 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like E3384_08555 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase E3384_08555 IPR023019 Histidine biosynthesis bifunctional protein HisIE E3384_08555 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain E3384_08555 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily E3384_08560 IPR006062 Histidine biosynthesis E3384_08560 IPR013785 Aldolase-type TIM barrel E3384_08560 IPR004651 Histidine biosynthesis, HisF E3384_08560 IPR011060 Ribulose-phosphate binding barrel E3384_08565 IPR011060 Ribulose-phosphate binding barrel E3384_08565 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase E3384_08565 IPR013785 Aldolase-type TIM barrel E3384_08565 IPR006062 Histidine biosynthesis E3384_08565 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA E3384_08570 IPR029062 Class I glutamine amidotransferase-like E3384_08570 IPR017926 Glutamine amidotransferase E3384_08570 IPR010139 Imidazole glycerol phosphate synthase, subunit H E3384_08575 IPR023214 HAD superfamily E3384_08575 IPR020566 Histidine biosynthesis bifunctional protein HisB E3384_08575 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily E3384_08575 IPR000807 Imidazoleglycerol-phosphate dehydratase E3384_08575 IPR005954 Histidinol-phosphatase E3384_08575 IPR006543 Histidinol-phosphate phosphatase E3384_08575 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site E3384_08575 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_08575 IPR036412 HAD-like superfamily E3384_08575 IPR006549 HAD-superfamily hydrolase,subfamily IIIA E3384_08580 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site E3384_08580 IPR004839 Aminotransferase, class I/classII E3384_08580 IPR005861 Histidinol-phosphate aminotransferase family E3384_08580 IPR015424 Pyridoxal phosphate-dependent transferase E3384_08580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_08580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_08585 IPR022695 Histidinol dehydrogenase, monofunctional E3384_08585 IPR001692 Histidinol dehydrogenase, conserved site E3384_08585 IPR016161 Aldehyde/histidinol dehydrogenase E3384_08585 IPR012131 Histidinol dehydrogenase E3384_08590 IPR013820 ATP phosphoribosyltransferase, catalytic domain E3384_08590 IPR020621 ATP phosphoribosyltransferase HisG, long form E3384_08590 IPR001348 ATP phosphoribosyltransferase HisG E3384_08590 IPR011322 Nitrogen regulatory PII-like, alpha/beta E3384_08590 IPR013115 Histidine biosynthesis HisG, C-terminal E3384_08590 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal E3384_08590 IPR018198 ATP phosphoribosyltransferase, conserved site E3384_08600 IPR036291 NAD(P)-binding domain superfamily E3384_08600 IPR001509 NAD-dependent epimerase/dehydratase E3384_08605 IPR036390 Winged helix DNA-binding domain superfamily E3384_08605 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_08605 IPR000847 Transcription regulator HTH, LysR E3384_08605 IPR005119 LysR, substrate-binding E3384_08615 IPR002293 Amino acid/polyamine transporter I E3384_08620 IPR036397 Ribonuclease H superfamily E3384_08620 IPR012337 Ribonuclease H-like superfamily E3384_08620 IPR013520 Exonuclease, RNase T/DNA polymerase III E3384_08620 IPR034748 Exonuclease I, C-terminal alpha-helical domain E3384_08620 IPR038649 Exonuclease I, SH3-like domain superfamily E3384_08620 IPR023607 Exodeoxyribonuclease I E3384_08620 IPR034747 Exonuclease I, SH3-like domain E3384_08620 IPR013620 Exodeoxyribonuclease I, C-terminal E3384_08625 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain E3384_08625 IPR038270 SopA-like, catalytic domain superfamily E3384_08625 IPR025726 E3 ubiquitin ligase SopA-like central domain E3384_08635 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_08635 IPR006657 Molybdopterin dinucleotide-binding domain E3384_08635 IPR006656 Molybdopterin oxidoreductase E3384_08635 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_08635 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_08635 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site E3384_08635 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_08635 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_08640 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_08640 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_08645 IPR016174 Di-haem cytochrome, transmembrane E3384_08645 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase E3384_08650 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal E3384_08650 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily E3384_08650 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal E3384_08650 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A E3384_08650 IPR015956 Penicillin-binding protein, C-terminal domain superfamily E3384_08650 IPR012338 Beta-lactamase/transpeptidase-like E3384_08655 IPR010499 Bacterial transcription activator, effector binding E3384_08655 IPR024911 DNA gyrase inhibitor GyrI E3384_08655 IPR011256 Regulatory factor, effector binding domain superfamily E3384_08655 IPR029442 GyrI-like small molecule binding domain E3384_08660 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein E3384_08665 IPR007458 Protein of unknown function DUF496 E3384_08670 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_08670 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related E3384_08670 IPR006204 GHMP kinase N-terminal domain E3384_08670 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_08675 IPR023865 Aliphatic acid kinase, short-chain, conserved site E3384_08675 IPR004372 Acetate/propionate kinase E3384_08675 IPR024896 Propionate kinase PduW E3384_08675 IPR000890 Aliphatic acid kinase, short-chain E3384_08680 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV E3384_08680 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_08685 IPR037233 CcmK-like superfamily E3384_08685 IPR009307 Ethanolamine utilisation EutS E3384_08685 IPR000249 Microcompartment protein, bacteria E3384_08695 IPR019554 Soluble ligand binding domain E3384_08695 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_08695 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_08695 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily E3384_08695 IPR026902 RnfC Barrel sandwich hybrid domain E3384_08695 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC E3384_08695 IPR009051 Alpha-helical ferredoxin E3384_08695 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain E3384_08700 IPR018211 Alcohol dehydrogenase, iron-type, conserved site E3384_08700 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA E3384_08700 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain E3384_08700 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase E3384_08700 IPR015590 Aldehyde dehydrogenase domain E3384_08700 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_08700 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_08700 IPR016161 Aldehyde/histidinol dehydrogenase E3384_08700 IPR039697 Iron-type alcohol dehydrogenase-like E3384_08705 IPR015590 Aldehyde dehydrogenase domain E3384_08705 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related E3384_08705 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_08705 IPR016161 Aldehyde/histidinol dehydrogenase E3384_08705 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_08710 IPR036451 Cobalamin adenosyltransferase-like superfamily E3384_08710 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type E3384_08710 IPR016030 Cobalamin adenosyltransferase-like E3384_08715 IPR036677 EutN/Ccml superfamily E3384_08715 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml E3384_08725 IPR008300 Phosphate propanoyltransferase E3384_08730 IPR037233 CcmK-like superfamily E3384_08730 IPR000249 Microcompartment protein, bacteria E3384_08730 IPR020808 Bacterial microcompartments protein, conserved site E3384_08735 IPR020808 Bacterial microcompartments protein, conserved site E3384_08735 IPR000249 Microcompartment protein, bacteria E3384_08735 IPR037233 CcmK-like superfamily E3384_08745 IPR030994 Diol dehydratase reactivase ATPase-like domain E3384_08745 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily E3384_08745 IPR009191 Diol dehydratase-reactivating factor alpha subunit E3384_08745 IPR040916 DD-reactivating factor swiveling domain E3384_08750 IPR003207 Propanediol/glycerol dehydratase, small subunit E3384_08750 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily E3384_08755 IPR010254 B12-dependent dehydratases, beta subunit E3384_08755 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor E3384_08755 IPR025541 Propanediol/glycerol dehydratase, medium subunit E3384_08760 IPR003206 Diol/glycerol dehydratase, large subunit E3384_08760 IPR036999 Diol/glycerol dehydratase, large subunit superfamily E3384_08760 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic E3384_08765 IPR037233 CcmK-like superfamily E3384_08765 IPR000249 Microcompartment protein, bacteria E3384_08765 IPR030984 Microcompartment protein PduB E3384_08765 IPR009193 Polyhedral organelle shell protein, EutL/PduB type E3384_08770 IPR037233 CcmK-like superfamily E3384_08770 IPR000249 Microcompartment protein, bacteria E3384_08770 IPR020808 Bacterial microcompartments protein, conserved site E3384_08775 IPR023271 Aquaporin-like E3384_08775 IPR000425 Major intrinsic protein E3384_08775 IPR022357 Major intrinsic protein, conserved site E3384_08780 IPR018060 DNA binding HTH domain, AraC-type E3384_08780 IPR009057 Homeobox-like domain superfamily E3384_08780 IPR018062 HTH domain AraC-type, conserved site E3384_08780 IPR020449 Transcription regulator HTH, AraC- type E3384_08780 IPR018771 PocR domain E3384_08785 IPR011698 CobB/CobQ-like glutamine amidotransferase E3384_08785 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain E3384_08785 IPR017929 CobB/CobQ glutamine amidotransferase E3384_08785 IPR029062 Class I glutamine amidotransferase-like E3384_08785 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA E3384_08785 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_08790 IPR004485 Cobalamin biosynthesis CobD/CbiB E3384_08795 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily E3384_08795 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC E3384_08800 IPR036074 CbiD superfamily E3384_08800 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD E3384_08805 IPR035996 Tetrapyrrole methylase superfamily E3384_08805 IPR000878 Tetrapyrrole methylase E3384_08805 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase E3384_08805 IPR014777 Tetrapyrrole methylase, subdomain 1 E3384_08810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_08810 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit E3384_08810 IPR007848 Methyltransferase small domain E3384_08815 IPR014777 Tetrapyrrole methylase, subdomain 1 E3384_08815 IPR000878 Tetrapyrrole methylase E3384_08815 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase E3384_08815 IPR035996 Tetrapyrrole methylase superfamily E3384_08815 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site E3384_08815 IPR014776 Tetrapyrrole methylase, subdomain 2 E3384_08820 IPR036518 CobE/GbiG C-terminal domain superfamily E3384_08820 IPR002750 CobE/GbiG C-terminal domain E3384_08820 IPR021744 Cobalamin synthesis G, N-terminal E3384_08820 IPR038029 GbiG N-terminal domain superfamily E3384_08820 IPR021745 Cobalamin biosynthesis central region E3384_08825 IPR014776 Tetrapyrrole methylase, subdomain 2 E3384_08825 IPR014777 Tetrapyrrole methylase, subdomain 1 E3384_08825 IPR006363 Precorrin-3B C17-methyltransferase domain E3384_08825 IPR035996 Tetrapyrrole methylase superfamily E3384_08825 IPR000878 Tetrapyrrole methylase E3384_08830 IPR003723 Precorrin-6x reductase E3384_08835 IPR010388 Anaerobic cobalt chelatase E3384_08840 IPR014776 Tetrapyrrole methylase, subdomain 2 E3384_08840 IPR012382 Precorrin-2 C(20)-methyltransferase E3384_08840 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site E3384_08840 IPR006364 Precorrin-2 C(20)-methyltransferase domain E3384_08840 IPR035996 Tetrapyrrole methylase superfamily E3384_08840 IPR000878 Tetrapyrrole methylase E3384_08840 IPR014777 Tetrapyrrole methylase, subdomain 1 E3384_08845 IPR018024 Cobalamin (vitamin B12) transport protein CbiM E3384_08845 IPR002751 Metal transport protein CbiM/NikMN E3384_08850 IPR003705 Cobalt transport protein CbiN E3384_08855 IPR012809 Cobalt ECF transporter T component CbiQ E3384_08855 IPR003339 ABC/ECF transporter, transmembrane component E3384_08860 IPR015856 ABC transporter, CbiO/EcfA subunit E3384_08860 IPR017871 ABC transporter, conserved site E3384_08860 IPR003439 ABC transporter-like E3384_08860 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_08860 IPR005876 Cobalt transport protein ATP-binding subunit E3384_08860 IPR003593 AAA+ ATPase domain E3384_08865 IPR017929 CobB/CobQ glutamine amidotransferase E3384_08865 IPR011698 CobB/CobQ-like glutamine amidotransferase E3384_08865 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 E3384_08865 IPR029062 Class I glutamine amidotransferase-like E3384_08865 IPR004459 Cobyric acid synthase CobQ E3384_08865 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_08870 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase E3384_08870 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_08875 IPR003805 Adenosylcobinamide-GDP ribazoletransferase E3384_08880 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal E3384_08880 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily E3384_08880 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like E3384_08880 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic E3384_08885 IPR005490 L,D-transpeptidase catalytic domain E3384_08885 IPR041597 L,D-transpeptidase C-terminal domain E3384_08885 IPR038063 L,D-transpeptidase catalytic domain-like E3384_08895 IPR002528 Multi antimicrobial extrusion protein E3384_08920 IPR009057 Homeobox-like domain superfamily E3384_08920 IPR012337 Ribonuclease H-like superfamily E3384_08920 IPR025959 Winged helix-turn helix domain E3384_08920 IPR038717 Tc1-like transposase, DDE domain E3384_08945 IPR035994 Nucleoside phosphorylase superfamily E3384_08945 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily E3384_08945 IPR000845 Nucleoside phosphorylase domain E3384_08945 IPR018953 AMP nucleoside phosphorylase, N-terminal E3384_08945 IPR011271 AMP nucleosidase E3384_08990 IPR011010 DNA breaking-rejoining enzyme, catalytic core E3384_08990 IPR002104 Integrase, catalytic domain E3384_08990 IPR038488 Integrase, DNA-binding domain superfamily E3384_08990 IPR025166 Integrase, DNA-binding domain E3384_08990 IPR010998 Integrase/recombinase, N-terminal E3384_08990 IPR013762 Integrase-like, catalytic domain superfamily E3384_09000 IPR024079 Metallopeptidase, catalytic domain superfamily E3384_09000 IPR010384 MtfA family E3384_09000 IPR042252 MtfA, N-terminal E3384_09020 IPR006197 Peptidase S24, LexA-like E3384_09020 IPR039418 LexA-like E3384_09020 IPR015927 Peptidase S24/S26A/S26B/S26C E3384_09020 IPR036286 LexA/Signal peptidase-like superfamily E3384_09025 IPR001126 UmuC domain E3384_09025 IPR025188 Domain of unknown function DUF4113 E3384_09025 IPR036775 DNA polymerase, Y-family, little finger domain superfamily E3384_09025 IPR017961 DNA polymerase, Y-family, little finger domain E3384_09030 IPR011129 Cold shock domain E3384_09030 IPR002059 Cold-shock protein, DNA-binding E3384_09030 IPR019844 Cold-shock (CSD) domain E3384_09030 IPR012156 Cold shock, CspA E3384_09030 IPR012340 Nucleic acid-binding, OB-fold E3384_09040 IPR033900 Porin domain, Gram-negative type E3384_09040 IPR001702 Porin, Gram-negative type E3384_09040 IPR013793 Porin, Gram-negative type, conserved site E3384_09040 IPR023614 Porin domain superfamily E3384_09040 IPR001897 Porin, gammaproteobacterial E3384_09050 IPR006674 HD domain E3384_09050 IPR003607 HD/PDEase domain E3384_09055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_09055 IPR040743 DNA methylase N-terminal domain E3384_09055 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site E3384_09055 IPR001525 C-5 cytosine methyltransferase E3384_09055 IPR018117 DNA methylase, C-5 cytosine-specific, active site E3384_09060 IPR011335 Restriction endonuclease type II-like E3384_09060 IPR004603 DNA mismatch endonuclease vsr E3384_09065 IPR004779 Carboxylate/Amino Acid/Amine Transporter E3384_09065 IPR000620 EamA domain E3384_09070 IPR008526 Inner membrane protein YedI E3384_09075 IPR019226 Protein of unknown function DUF2158 E3384_09080 IPR033416 Periplasmic sensor domain CHASE7 E3384_09080 IPR029787 Nucleotide cyclase E3384_09080 IPR000160 GGDEF domain E3384_09085 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP E3384_09085 IPR036412 HAD-like superfamily E3384_09085 IPR006379 HAD-superfamily hydrolase, subfamily IIB E3384_09085 IPR023214 HAD superfamily E3384_09085 IPR012815 Mannosyl-3-phosphoglycerate phosphatase E3384_09090 IPR019669 Uncharacterised bacterial stress protein YodD E3384_09095 IPR019717 Dextransucrase DSRB E3384_09100 IPR030866 Transcriptional regulatory protein RcsA E3384_09100 IPR016032 Signal transduction response regulator, C-terminal effector E3384_09100 IPR000792 Transcription regulator LuxR, C-terminal E3384_09100 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_09105 IPR002010 Type III secretion system inner membrane R protein E3384_09105 IPR006303 Flagellar biosynthesis protein FliR E3384_09110 IPR002191 Bacterial export protein family 3 E3384_09110 IPR006305 Flagellar biosynthesis protein FliQ E3384_09115 IPR005838 Type III secretion system inner membrane P protein E3384_09115 IPR005837 Flagellar transport protein FliP E3384_09120 IPR022781 Flagellar biosynthesis protein, FliO E3384_09125 IPR012826 Flagellar motor switch FliN E3384_09125 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb E3384_09125 IPR001543 Surface presentation of antigen (SpoA) E3384_09125 IPR036429 SpoA-like superfamily E3384_09125 IPR031576 Flagellar motor switch protein FliN, N-terminal E3384_09130 IPR001543 Surface presentation of antigen (SpoA) E3384_09130 IPR001689 Flagellar motor switch protein FliM E3384_09130 IPR028976 CheC-like superfamily E3384_09130 IPR036429 SpoA-like superfamily E3384_09135 IPR005503 Flagellar basal body-associated protein FliL E3384_09140 IPR021136 Flagellar hook-length control protein-like, C-terminal E3384_09140 IPR038610 FliK-like, C-terminal domain superfamily E3384_09140 IPR001635 Flagellar hook-length control protein FliK E3384_09145 IPR012823 Flagellar export FliJ E3384_09145 IPR018006 Flagellar FliJ, proteobacteria E3384_09150 IPR040627 T3SS EscN ATPase, C-terminal E3384_09150 IPR003593 AAA+ ATPase domain E3384_09150 IPR020005 Flagellar export ATPase FliI, clade 1 E3384_09150 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_09150 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain E3384_09150 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site E3384_09150 IPR032463 ATPase, type III secretion system, FliI E3384_09150 IPR005714 ATPase, type III secretion system, FliI/YscN E3384_09155 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE E3384_09155 IPR000563 Flagellar assembly protein FliH E3384_09160 IPR028263 Flagellar motor switch protein FliG, N-terminal domain E3384_09160 IPR023087 Flagellar motor switch protein FliG, C-terminal E3384_09160 IPR032779 Flagellar motor switch protein FliG, middle domain E3384_09160 IPR000090 Flagellar motor switch protein FliG E3384_09160 IPR011002 Flagellar motor switch protein FliG, alpha-helical E3384_09165 IPR000067 Flagellar M-ring protein FliF E3384_09165 IPR013556 Flagellar M-ring C-terminal E3384_09165 IPR006182 Secretory protein YscJ/FliF E3384_09170 IPR001624 Flagellar hook-basal body complex protein FliE E3384_09180 IPR036868 TusA-like domain superfamily E3384_09180 IPR001455 TusA-like domain E3384_09185 IPR007272 Sulphur transport domain E3384_09190 IPR025596 YedD-like protein E3384_09190 IPR038624 YedD-like superfamily E3384_09195 IPR017853 Glycoside hydrolase superfamily E3384_09195 IPR013780 Glycosyl hydrolase, all-beta E3384_09195 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E3384_09195 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta E3384_09195 IPR013776 Alpha-amylase, thermostable E3384_09200 IPR008622 Flagellar protein FliT E3384_09205 IPR036584 Flagellar protein FliS superfamily E3384_09205 IPR003713 Flagellar protein FliS E3384_09210 IPR010810 Flagellin hook, IN motif E3384_09210 IPR040026 Flagellar hook-associated protein 2 E3384_09210 IPR010809 Flagellar hook-associated protein 2, C-terminal E3384_09210 IPR003481 Flagellar hook-associated protein 2, N-terminal E3384_09215 IPR001492 Flagellin E3384_09215 IPR001029 Flagellin, D0/D1 domain E3384_09215 IPR014981 Flagellin D3 E3384_09225 IPR013324 RNA polymerase sigma factor, region 3/4-like E3384_09225 IPR007627 RNA polymerase sigma-70 region 2 E3384_09225 IPR007624 RNA polymerase sigma-70 region 3 E3384_09225 IPR007630 RNA polymerase sigma-70 region 4 E3384_09225 IPR012845 RNA polymerase sigma factor, FliA/WhiG E3384_09225 IPR013325 RNA polymerase sigma factor, region 2 E3384_09225 IPR000943 RNA polymerase sigma-70 E3384_09225 IPR014284 RNA polymerase sigma-70 like domain E3384_09225 IPR028617 RNA polymerase sigma factor FliA E3384_09230 IPR004107 Integrase, SAM-like, N-terminal E3384_09230 IPR022523 Flagellar regulator, FliZ E3384_09240 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme E3384_09240 IPR001926 Pyridoxal-phosphate dependent enzyme E3384_09240 IPR005966 D-cysteine desulfhydrase E3384_09240 IPR023702 D-cysteine desulphhydrase, bacterial E3384_09240 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase E3384_09255 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain E3384_09255 IPR016032 Signal transduction response regulator, C-terminal effector E3384_09255 IPR000792 Transcription regulator LuxR, C-terminal E3384_09255 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_09255 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily E3384_09270 IPR001789 Signal transduction response regulator, receiver domain E3384_09270 IPR000792 Transcription regulator LuxR, C-terminal E3384_09270 IPR011006 CheY-like superfamily E3384_09270 IPR016032 Signal transduction response regulator, C-terminal effector E3384_09275 IPR001943 UVR domain E3384_09275 IPR038476 UvrC homology region 2 superfamily E3384_09275 IPR001162 UvrC family homology region E3384_09275 IPR004791 UvrABC system, subunit C E3384_09275 IPR000305 GIY-YIG endonuclease E3384_09275 IPR035901 GIY-YIG endonuclease superfamily E3384_09275 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 E3384_09275 IPR010994 RuvA domain 2-like E3384_09275 IPR036876 UVR domain superfamily E3384_09280 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial E3384_09280 IPR000462 CDP-alcohol phosphatidyltransferase E3384_09280 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase E3384_09315 IPR004027 SEC-C motif E3384_09315 IPR011978 Uncharacterised protein family UPF0149 E3384_09315 IPR036255 YgfB-like superfamily E3384_09320 IPR013059 Tryptophan/tyrosine transporter E3384_09320 IPR013061 Tryptophan/tryrosine permease, conserved site E3384_09320 IPR018227 Amino acid/polyamine transporter 2 E3384_09325 IPR019620 Putative metal-binding protein E3384_09330 IPR008331 Ferritin/DPS protein domain E3384_09330 IPR041719 Ferritin, prokaryotic-type E3384_09330 IPR009078 Ferritin-like superfamily E3384_09330 IPR009040 Ferritin-like diiron domain E3384_09330 IPR012347 Ferritin-like E3384_09330 IPR001519 Ferritin E3384_09335 IPR025731 YecR-like lipoprotein E3384_09345 IPR001519 Ferritin E3384_09345 IPR012347 Ferritin-like E3384_09345 IPR009040 Ferritin-like diiron domain E3384_09345 IPR009078 Ferritin-like superfamily E3384_09345 IPR008331 Ferritin/DPS protein domain E3384_09345 IPR041719 Ferritin, prokaryotic-type E3384_09360 IPR023214 HAD superfamily E3384_09360 IPR006379 HAD-superfamily hydrolase, subfamily IIB E3384_09360 IPR003337 Trehalose-phosphatase E3384_09360 IPR036412 HAD-like superfamily E3384_09365 IPR012766 Alpha,alpha-trehalose-phosphate synthase E3384_09365 IPR001830 Glycosyl transferase, family 20 E3384_09370 IPR006016 UspA E3384_09370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_09370 IPR006015 Universal stress protein A family E3384_09380 IPR036194 Flagellar transcriptional activator FlhD superfamily E3384_09380 IPR023559 Flagellar transcriptional activator FlhD E3384_09385 IPR007944 Flagellar transcriptional activator FlhC E3384_09390 IPR022522 Flagellar motor stator, MotA E3384_09390 IPR000540 Flagellar motor protein MotA, conserved site E3384_09390 IPR002898 MotA/TolQ/ExbB proton channel E3384_09395 IPR006665 OmpA-like domain E3384_09395 IPR036737 OmpA-like domain superfamily E3384_09395 IPR025713 Motility protein B, N-terminal domain E3384_09400 IPR004105 Histidine kinase CheA-like, homodimeric domain E3384_09400 IPR036641 HPT domain superfamily E3384_09400 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily E3384_09400 IPR036061 CheW-like domain superfamily E3384_09400 IPR005467 Histidine kinase domain E3384_09400 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain E3384_09400 IPR015162 CheY binding E3384_09400 IPR035891 CheY-binding domain of CheA E3384_09400 IPR003594 Histidine kinase/HSP90-like ATPase E3384_09400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_09400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_09400 IPR002545 CheW-like domain E3384_09400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_09405 IPR039315 Chemotaxis protein CheW E3384_09405 IPR002545 CheW-like domain E3384_09405 IPR036061 CheW-like domain superfamily E3384_09410 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily E3384_09410 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding E3384_09410 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E3384_09410 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site E3384_09410 IPR004090 Chemotaxis methyl-accepting receptor E3384_09410 IPR003660 HAMP domain E3384_09415 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal E3384_09415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_09415 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily E3384_09415 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal E3384_09415 IPR000780 MCP methyltransferase, CheR-type E3384_09415 IPR026024 Chemotaxis protein methyltransferase CheR E3384_09420 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type E3384_09420 IPR035909 Methylesterase CheB, C-terminal E3384_09420 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase E3384_09420 IPR001789 Signal transduction response regulator, receiver domain E3384_09420 IPR011006 CheY-like superfamily E3384_09425 IPR011006 CheY-like superfamily E3384_09425 IPR001789 Signal transduction response regulator, receiver domain E3384_09430 IPR007439 Chemotaxis phosphatase, CheZ E3384_09435 IPR029025 Type III secretion system substrate exporter, C-terminal E3384_09435 IPR006135 Type III secretion system substrate exporter E3384_09435 IPR006136 Flagellar biosynthetic protein FlhB E3384_09440 IPR001712 Type III secretion system FHIPEP E3384_09440 IPR025505 FHIPEP conserved site E3384_09440 IPR042194 FHIPEP, domain 1 E3384_09440 IPR006301 Flagellar biosynthesis protein FlhA E3384_09440 IPR042193 FHIPEP, domain 3 E3384_09440 IPR042196 FHIPEP, domain 4 E3384_09445 IPR009420 Flagellar protein FlhE E3384_09450 IPR008928 Six-hairpin glycosidase superfamily E3384_09450 IPR012341 Six-hairpin glycosidase-like superfamily E3384_09450 IPR010905 Glycosyl hydrolase, family 88 E3384_09455 IPR017790 Penicillin-binding protein 2 E3384_09455 IPR001460 Penicillin-binding protein, transpeptidase E3384_09455 IPR012338 Beta-lactamase/transpeptidase-like E3384_09455 IPR005311 Penicillin-binding protein, dimerisation domain E3384_09455 IPR036138 Penicillin-binding protein, dimerisation domain superfamily E3384_09460 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E3384_09460 IPR001278 Arginine-tRNA ligase E3384_09460 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily E3384_09460 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E3384_09460 IPR005148 Arginyl tRNA synthetase N-terminal domain E3384_09460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_09460 IPR008909 DALR anticodon binding E3384_09460 IPR035684 Arginyl-tRNA synthetase, catalytic core domain E3384_09465 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase E3384_09465 IPR010393 Protein of unknown function DUF991 E3384_09470 IPR036822 Copper homeostasis (CutC) domain superfamily E3384_09470 IPR005627 Copper homeostasis protein CutC E3384_09470 IPR023648 Copper homeostasis CutC domain E3384_09475 IPR010017 tRNA U34 carboxymethyltransferase E3384_09475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_09475 IPR027555 tRNA (mo5U34)-methyltransferase-like E3384_09480 IPR041698 Methyltransferase domain 25 E3384_09480 IPR005271 Carboxy-S-adenosyl-L-methionine synthase E3384_09480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_09485 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily E3384_09485 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein E3384_09490 IPR036520 UPF0759 superfamily E3384_09490 IPR002763 Protein of unknown function DUF72 E3384_09495 IPR036380 Isochorismatase-like superfamily E3384_09495 IPR000868 Isochorismatase-like E3384_09500 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb E3384_09500 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) E3384_09500 IPR012340 Nucleic acid-binding, OB-fold E3384_09500 IPR029351 GAD domain E3384_09500 IPR004115 GAD-like domain superfamily E3384_09500 IPR004524 Aspartate-tRNA ligase, type 1 E3384_09500 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type E3384_09500 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_09505 IPR000086 NUDIX hydrolase domain E3384_09505 IPR003564 Dihydroneopterin triphosphate diphosphatase E3384_09505 IPR015797 NUDIX hydrolase-like domain superfamily E3384_09505 IPR020084 NUDIX hydrolase, conserved site E3384_09510 IPR029072 YebC-like E3384_09510 IPR026564 Transcriptional regulator TACO1-like, domain 3 E3384_09510 IPR017856 Integrase-like, N-terminal E3384_09510 IPR002876 Transcriptional regulator TACO1-like E3384_09515 IPR012337 Ribonuclease H-like superfamily E3384_09515 IPR002176 Crossover junction endodeoxyribonuclease RuvC E3384_09515 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site E3384_09515 IPR036397 Ribonuclease H superfamily E3384_09525 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family E3384_09525 IPR038765 Papain-like cysteine peptidase superfamily E3384_09535 IPR012340 Nucleic acid-binding, OB-fold E3384_09535 IPR010994 RuvA domain 2-like E3384_09535 IPR000085 Bacterial DNA recombination protein RuvA E3384_09535 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 E3384_09535 IPR011114 Holliday junction DNA helicase RuvA, C-terminal E3384_09535 IPR036267 RuvA, C-terminal domain superfamily E3384_09535 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial E3384_09540 IPR036390 Winged helix DNA-binding domain superfamily E3384_09540 IPR008823 RuvB C-terminal winged helix domain E3384_09540 IPR008824 RuvB-like P-loop domain E3384_09540 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_09540 IPR004605 DNA helicase, Holliday junction RuvB-type E3384_09540 IPR041445 RuvB, AAA lid domain E3384_09540 IPR003593 AAA+ ATPase domain E3384_09540 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_09545 IPR001626 ABC transporter, TroCD-like E3384_09545 IPR037294 ABC transporter, BtuC-like E3384_09550 IPR003439 ABC transporter-like E3384_09550 IPR017882 Zinc import ATP-binding protein ZnuC E3384_09550 IPR003593 AAA+ ATPase domain E3384_09550 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_09555 IPR006127 Periplasmic solute binding protein, ZnuA-like E3384_09555 IPR035520 High-affinity zinc uptake system protein ZnuA E3384_09555 IPR006128 Adhesion lipoprotein E3384_09560 IPR018392 LysM domain E3384_09560 IPR011055 Duplicated hybrid motif E3384_09560 IPR016047 Peptidase M23 E3384_09560 IPR013731 Opacity-associated protein A, N-terminal E3384_09565 IPR004960 Bacterial lipid A biosynthesis acyltransferase E3384_09565 IPR011921 Lipid A biosynthesis myristoyltransferase E3384_09570 IPR015795 Pyruvate kinase, C-terminal E3384_09570 IPR018209 Pyruvate kinase, active site E3384_09570 IPR015793 Pyruvate kinase, barrel E3384_09570 IPR036918 Pyruvate kinase, C-terminal domain superfamily E3384_09570 IPR015806 Pyruvate kinase, insert domain superfamily E3384_09570 IPR011037 Pyruvate kinase-like, insert domain superfamily E3384_09570 IPR040442 Pyruvate kinase-like domain superfamily E3384_09570 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_09570 IPR001697 Pyruvate kinase E3384_09580 IPR001282 Glucose-6-phosphate dehydrogenase E3384_09580 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal E3384_09580 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding E3384_09580 IPR019796 Glucose-6-phosphate dehydrogenase, active site E3384_09580 IPR036291 NAD(P)-binding domain superfamily E3384_09585 IPR037237 IlvD/EDD, N-terminal domain E3384_09585 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site E3384_09585 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase E3384_09585 IPR042096 Dihydroxy-acid dehydratase, C-terminal E3384_09585 IPR004786 6-phosphogluconate dehydratase E3384_09590 IPR000887 KDPG/KHG aldolase E3384_09590 IPR031337 KDPG/KHG aldolase, active site 1 E3384_09590 IPR031338 KDPG/KHG aldolase, active site 2 E3384_09590 IPR013785 Aldolase-type TIM barrel E3384_09595 IPR011761 ATP-grasp fold E3384_09595 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type E3384_09595 IPR013815 ATP-grasp fold, subdomain 1 E3384_09595 IPR016185 Pre-ATP-grasp domain superfamily E3384_09595 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase E3384_09595 IPR011054 Rudiment single hybrid motif E3384_09600 IPR038627 YebG-like superfamily E3384_09600 IPR009813 Uncharacterised protein family YebG E3384_09610 IPR007486 Inner membrane protein YebE E3384_09610 IPR029024 TerB-like E3384_09615 IPR002471 Peptidase S9, serine active site E3384_09615 IPR029058 Alpha/Beta hydrolase fold E3384_09615 IPR023302 Peptidase S9A, N-terminal domain E3384_09615 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain E3384_09615 IPR002470 Peptidase S9A, prolyl oligopeptidase E3384_09620 IPR012337 Ribonuclease H-like superfamily E3384_09620 IPR013520 Exonuclease, RNase T/DNA polymerase III E3384_09620 IPR036397 Ribonuclease H superfamily E3384_09625 IPR036526 Carbon-nitrogen hydrolase superfamily E3384_09625 IPR003010 Carbon-nitrogen hydrolase E3384_09630 IPR036745 DNA polymerase III-theta superfamily E3384_09630 IPR009052 DNA polymerase III-theta, bacterial E3384_09635 IPR007348 CopC domain E3384_09635 IPR032694 Copper transport protein C/D E3384_09635 IPR014756 Immunoglobulin E-set E3384_09640 IPR008457 Copper resistance protein D E3384_09640 IPR032694 Copper transport protein C/D E3384_09645 IPR019648 Protein of unknown function DUF2511 E3384_09660 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain E3384_09660 IPR010584 Exodeoxyribonuclease 8 E3384_09670 IPR019659 Protein of unknown function DUF2514 E3384_09710 IPR000802 Arsenical pump membrane protein, ArsB E3384_09735 IPR000620 EamA domain E3384_09760 IPR012675 Beta-grasp domain superfamily E3384_09760 IPR002320 Threonine-tRNA ligase, class IIa E3384_09760 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily E3384_09760 IPR036621 Anticodon-binding domain superfamily E3384_09760 IPR004154 Anticodon-binding E3384_09760 IPR012676 TGS-like E3384_09760 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_09760 IPR033728 Threonine-tRNA ligase catalytic core domain E3384_09760 IPR012947 Threonyl/alanyl tRNA synthetase, SAD E3384_09760 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) E3384_09760 IPR004095 TGS E3384_09770 IPR016181 Acyl-CoA N-acyltransferase E3384_09770 IPR000182 GNAT domain E3384_09780 IPR036696 YdfO-like superfamily E3384_09780 IPR009833 Uncharacterised protein DUF1398 E3384_09785 IPR005414 Guanine nucleotide exchange factor SopE E3384_09785 IPR035949 SopE-like, GEF domain superfamily E3384_09785 IPR016019 Guanine nucleotide exchange factor SopE, GEF domain E3384_09785 IPR016018 Guanine nucleotide exchange factor SopE, N-terminal domain E3384_09795 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E3384_09795 IPR029052 Metallo-dependent phosphatase-like E3384_09795 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase E3384_09800 IPR009954 Protein of unknown function DUF1482 E3384_09805 IPR009950 Protein of unknown function DUF1480 E3384_09810 IPR011023 Nop2p E3384_09810 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type E3384_09810 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain E3384_09810 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site E3384_09810 IPR023267 RNA (C5-cytosine) methyltransferase E3384_09810 IPR023545 rRNA small subunit methyltransferase F E3384_09810 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal E3384_09810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_09815 IPR003399 Mce/MlaD E3384_09820 IPR011031 Multihaem cytochrome E3384_09820 IPR007498 Intermembrane transport protein PqiA-like E3384_09820 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type E3384_09825 IPR029016 GAF-like domain superfamily E3384_09825 IPR003018 GAF domain E3384_09825 IPR000614 Free Met sulfoxide reductase conserved site E3384_09830 IPR036442 ProQ/FinO domain superfamily E3384_09830 IPR016103 ProQ/FinO domain E3384_09830 IPR023529 RNA chaperone ProQ E3384_09830 IPR035236 RNA chaperone ProQ, C-terminal E3384_09835 IPR001478 PDZ domain E3384_09835 IPR029045 ClpP/crotonase-like domain superfamily E3384_09835 IPR040573 Tail specific protease, N-terminal domain E3384_09835 IPR020992 Tail specific protease, C-terminal E3384_09835 IPR036034 PDZ superfamily E3384_09835 IPR004447 C-terminal-processing peptidase S41A E3384_09835 IPR005151 Tail specific protease E3384_09840 IPR001915 Peptidase M48 E3384_09840 IPR022919 Peptidase M48, protease HtpX, putative E3384_09845 IPR011701 Major facilitator superfamily E3384_09845 IPR020846 Major facilitator superfamily domain E3384_09845 IPR036259 MFS transporter superfamily E3384_09850 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_09850 IPR036390 Winged helix DNA-binding domain superfamily E3384_09850 IPR005471 Transcription regulator IclR, N-terminal E3384_09850 IPR011991 ArsR-like helix-turn-helix domain E3384_09850 IPR029016 GAF-like domain superfamily E3384_09850 IPR014757 Transcription regulator IclR, C-terminal E3384_09855 IPR025611 YobH-like protein E3384_09860 IPR020907 PhoP/PhoQ regulator MgrB E3384_09865 IPR025594 YebO-like protein E3384_09870 IPR019672 Protein of unknown function DUF2627 E3384_09875 IPR012156 Cold shock, CspA E3384_09875 IPR011129 Cold shock domain E3384_09875 IPR019844 Cold-shock (CSD) domain E3384_09875 IPR002059 Cold-shock protein, DNA-binding E3384_09875 IPR012340 Nucleic acid-binding, OB-fold E3384_09880 IPR037532 Peptidoglycan D,D-transpeptidase FtsI E3384_09880 IPR012338 Beta-lactamase/transpeptidase-like E3384_09880 IPR001460 Penicillin-binding protein, transpeptidase E3384_09880 IPR036138 Penicillin-binding protein, dimerisation domain superfamily E3384_09880 IPR005311 Penicillin-binding protein, dimerisation domain E3384_09885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_09885 IPR025714 Methyltransferase domain E3384_09885 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted E3384_09890 IPR003810 Putative manganese efflux pump E3384_09890 IPR022929 Putative manganese efflux pump MntP E3384_09895 IPR009328 Protein of unknown function DUF986 E3384_09900 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component E3384_09905 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit E3384_09910 IPR033887 PTS system mannose/sorbose specific IIA subunit E3384_09910 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily E3384_09910 IPR004720 Phosphotransferase system, sorbose subfamily IIB component E3384_09910 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily E3384_09910 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup E3384_09910 IPR004701 Phosphotransferase system, mannose-type IIA component E3384_09910 IPR013789 Phosphotransferase system, mannose family IIA component E3384_09915 IPR005170 Transporter-associated domain E3384_09915 IPR000644 CBS domain E3384_09915 IPR005496 Integral membrane protein TerC E3384_09915 IPR016169 FAD-binding, type PCMH, subdomain 2 E3384_09915 IPR036318 FAD-binding, type PCMH-like superfamily E3384_09920 IPR035919 EAL domain superfamily E3384_09920 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain E3384_09920 IPR001633 EAL domain E3384_09925 IPR005131 Serine dehydratase beta chain E3384_09925 IPR005130 Serine dehydratase-like, alpha subunit E3384_09925 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form E3384_09925 IPR029009 Allosteric substrate binding domain superfamily E3384_09930 IPR015797 NUDIX hydrolase-like domain superfamily E3384_09930 IPR000059 NUDIX hydrolase, NudL, conserved site E3384_09930 IPR023735 Uncharacterised nudix hydrolase NudL E3384_09930 IPR000086 NUDIX hydrolase domain E3384_09935 IPR015890 Chorismate-utilising enzyme, C-terminal E3384_09935 IPR006805 Anthranilate synthase component I, N-terminal E3384_09935 IPR019999 Anthranilate synthase component I-like E3384_09935 IPR005801 ADC synthase E3384_09935 IPR005802 Aminodeoxychorismate synthase, component I E3384_09940 IPR005371 Uncharacterised protein family UPF0181 E3384_09945 IPR019897 RidA, conserved site E3384_09945 IPR035709 RutC family, YoaB-like E3384_09945 IPR006175 YjgF/YER057c/UK114 family E3384_09945 IPR035959 RutC-like superfamily E3384_09950 IPR006555 ATP-dependent helicase, C-terminal E3384_09950 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_09950 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_09950 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type E3384_09950 IPR006935 Helicase/UvrB, N-terminal E3384_09955 IPR000905 Gcp-like domain E3384_09955 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB E3384_09960 IPR004658 Outer membrane lipoprotein Slp E3384_09965 IPR042099 AMP-dependent synthetase-like superfamily E3384_09965 IPR025110 AMP-binding enzyme, C-terminal domain E3384_09965 IPR020845 AMP-binding, conserved site E3384_09965 IPR000873 AMP-dependent synthetase/ligase E3384_09970 IPR006292 Ribonuclease D E3384_09970 IPR002121 HRDC domain E3384_09970 IPR010997 HRDC-like superfamily E3384_09970 IPR036397 Ribonuclease H superfamily E3384_09970 IPR002562 3'-5' exonuclease domain E3384_09970 IPR012337 Ribonuclease H-like superfamily E3384_09975 IPR036707 Cell division topological specificity factor MinE superfamily E3384_09975 IPR005527 Cell division topological specificity factor MinE E3384_09980 IPR025501 ATP binding protein MinD E3384_09980 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain E3384_09980 IPR010223 ATP binding protein MinD, bacterial-type E3384_09980 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_09985 IPR013033 Septum formation inhibitor MinC E3384_09985 IPR005526 Septum formation inhibitor MinC, C-terminal E3384_09985 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal E3384_09985 IPR007874 Septum formation inhibitor MinC, N-terminal E3384_09985 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily E3384_09985 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily E3384_09990 IPR027354 YcgL domain E3384_09990 IPR038068 YcgL-like superfamily E3384_09995 IPR011234 Fumarylacetoacetase-like, C-terminal E3384_09995 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily E3384_10000 IPR005358 Putative zinc- or iron-chelating domain containing protein E3384_10000 IPR008228 Uncharacterised conserved protein UCP006173 E3384_10010 IPR012563 Gns E3384_10020 IPR023380 DsbB-like superfamily E3384_10020 IPR003752 Disulphide bond formation protein DsbB/BdbC E3384_10020 IPR022920 Disulphide bond formation protein DsbB E3384_10025 IPR004671 Na+/H+ antiporter NhaB E3384_10030 IPR028374 FadR, C-terminal domain E3384_10030 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_10030 IPR000524 Transcription regulator HTH, GntR E3384_10030 IPR014178 Fatty acid response transcription factor FadR E3384_10030 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_10030 IPR036390 Winged helix DNA-binding domain superfamily E3384_10035 IPR007390 Sporulation stage V, protein R E3384_10040 IPR023080 D-amino acid dehydrogenase DadA E3384_10040 IPR006076 FAD dependent oxidoreductase E3384_10040 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_10045 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site E3384_10045 IPR029066 PLP-binding barrel E3384_10045 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal E3384_10045 IPR000821 Alanine racemase E3384_10045 IPR001608 Alanine racemase, N-terminal E3384_10045 IPR011079 Alanine racemase, C-terminal E3384_10050 IPR006037 Regulator of K+ conductance, C-terminal E3384_10050 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily E3384_10050 IPR005170 Transporter-associated domain E3384_10050 IPR030151 K(+)/H(+) antiporter NhaP E3384_10050 IPR038770 Sodium/solute symporter superfamily E3384_10050 IPR016169 FAD-binding, type PCMH, subdomain 2 E3384_10050 IPR006153 Cation/H+ exchanger E3384_10050 IPR023729 K(+)/H(+) antiporter NhaP2 E3384_10050 IPR036318 FAD-binding, type PCMH-like superfamily E3384_10055 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily E3384_10055 IPR029062 Class I glutamine amidotransferase-like E3384_10055 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal E3384_10055 IPR040449 LD-carboxypeptidase, N-terminal E3384_10055 IPR040921 LD-carboxypeptidase, C-terminal E3384_10055 IPR003507 Peptidase family S66 E3384_10060 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A E3384_10060 IPR000189 Prokaryotic transglycosylase, active site E3384_10060 IPR023346 Lysozyme-like domain superfamily E3384_10060 IPR008258 Transglycosylase SLT domain 1 E3384_10065 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal E3384_10065 IPR009875 PilZ domain E3384_10065 IPR023787 Type III secretion system flagellar brake protein YcgR E3384_10065 IPR012349 FMN-binding split barrel E3384_10070 IPR007341 Transglycosylase-associated protein E3384_10075 IPR023720 Trehalase, periplasmic E3384_10075 IPR001661 Glycoside hydrolase, family 37 E3384_10075 IPR012341 Six-hairpin glycosidase-like superfamily E3384_10075 IPR018232 Glycoside hydrolase, family 37, conserved site E3384_10075 IPR008928 Six-hairpin glycosidase superfamily E3384_10080 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal E3384_10080 IPR033524 Leu/Phe/Val dehydrogenases active site E3384_10080 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase E3384_10080 IPR014362 Glutamate dehydrogenase E3384_10080 IPR036291 NAD(P)-binding domain superfamily E3384_10080 IPR033922 NAD(P) binding domain of glutamate dehydrogenase E3384_10080 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain E3384_10085 IPR012994 Membrane bound YbgT-like E3384_10090 IPR003317 Cytochrome ubiquinol oxidase subunit 2 E3384_10095 IPR002585 Cytochrome ubiquinol oxidase subunit 1 E3384_10100 IPR006894 HupH hydrogenase expression protein, C-terminal E3384_10100 IPR038527 HupH, C-terminal domain superfamily E3384_10105 IPR010893 [NiFe]-hydrogenase maturation factor HyaE E3384_10105 IPR036249 Thioredoxin-like superfamily E3384_10110 IPR004419 Peptidase A31, hydrogenase expression/formation protein E3384_10110 IPR023430 Peptidase HybD-like domain superfamily E3384_10110 IPR000671 Peptidase A31 family E3384_10115 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit E3384_10115 IPR016174 Di-haem cytochrome, transmembrane E3384_10115 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase E3384_10120 IPR001501 Nickel-dependent hydrogenase, large subunit E3384_10120 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site E3384_10120 IPR029014 [NiFe]-hydrogenase, large subunit E3384_10125 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_10125 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily E3384_10125 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit E3384_10125 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_10125 IPR001821 [NiFe]-hydrogenase, small subunit E3384_10125 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily E3384_10125 IPR027394 Cytochrome-c3 hydrogenase, C-terminal E3384_10140 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 E3384_10140 IPR012675 Beta-grasp domain superfamily E3384_10140 IPR012676 TGS-like E3384_10140 IPR023192 TGS-like domain superfamily E3384_10140 IPR031167 OBG-type guanine nucleotide-binding (G) domain E3384_10140 IPR013029 YchF, C-terminal domain E3384_10140 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10140 IPR004095 TGS E3384_10140 IPR041706 YchF, N-terminal E3384_10140 IPR006073 GTP binding domain E3384_10145 IPR036416 Peptidyl-tRNA hydrolase superfamily E3384_10145 IPR018171 Peptidyl-tRNA hydrolase, conserved site E3384_10145 IPR001328 Peptidyl-tRNA hydrolase E3384_10150 IPR019698 Protein of unknown function DUF2583 E3384_10155 IPR036513 STAS domain superfamily E3384_10155 IPR011547 SLC26A/SulP transporter domain E3384_10155 IPR001902 SLC26A/SulP transporter E3384_10155 IPR002645 STAS domain E3384_10155 IPR018045 Sulphate anion transporter, conserved site E3384_10160 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type E3384_10160 IPR000836 Phosphoribosyltransferase domain E3384_10160 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site E3384_10160 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain E3384_10160 IPR005946 Ribose-phosphate pyrophosphokinase E3384_10160 IPR029057 Phosphoribosyltransferase-like E3384_10165 IPR036554 GHMP kinase, C-terminal domain superfamily E3384_10165 IPR013750 GHMP kinase, C-terminal domain E3384_10165 IPR006204 GHMP kinase N-terminal domain E3384_10165 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase E3384_10165 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_10165 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_10170 IPR029046 Lipoprotein localisation LolA/LolB/LppX E3384_10170 IPR004565 Outer membrane lipoprotein LolB E3384_10175 IPR018214 Glutamyl-tRNA reductase, conserved site E3384_10175 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase E3384_10175 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily E3384_10175 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily E3384_10175 IPR036291 NAD(P)-binding domain superfamily E3384_10175 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase E3384_10175 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal E3384_10175 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain E3384_10180 IPR004373 Peptide chain release factor 1 E3384_10180 IPR005139 Peptide chain release factor E3384_10180 IPR000352 Peptide chain release factor class I E3384_10185 IPR004556 Methyltransferase HemK-like E3384_10185 IPR025714 Methyltransferase domain E3384_10185 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_10185 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific E3384_10185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_10185 IPR040758 Release factor glutamine methyltransferase, N-terminal domain E3384_10190 IPR007360 Invasion gene expression up-regulator, SirB E3384_10195 IPR032698 Protein SirB1, N-terminal E3384_10200 IPR013785 Aldolase-type TIM barrel E3384_10200 IPR006218 DAHP synthetase I/KDSA E3384_10200 IPR006269 3-deoxy-8-phosphooctulonate synthase E3384_10205 IPR004837 Sodium/calcium exchanger membrane region E3384_10205 IPR004713 Calcium/proton exchanger E3384_10210 IPR009317 ChaB E3384_10210 IPR037205 ChaB superfamily E3384_10215 IPR027396 DsrEFH-like E3384_10215 IPR003787 Sulphur relay, DsrE/F-like protein E3384_10220 IPR038177 Inverse autotransporter, beta-domain superfamily E3384_10220 IPR024519 Inverse autotransporter, beta-domain E3384_10225 IPR011006 CheY-like superfamily E3384_10225 IPR016032 Signal transduction response regulator, C-terminal effector E3384_10225 IPR000792 Transcription regulator LuxR, C-terminal E3384_10225 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_10225 IPR001789 Signal transduction response regulator, receiver domain E3384_10230 IPR029095 NarX-like, N-terminal E3384_10230 IPR005467 Histidine kinase domain E3384_10230 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_10230 IPR003594 Histidine kinase/HSP90-like ATPase E3384_10230 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing E3384_10230 IPR003660 HAMP domain E3384_10230 IPR042295 NarX-like, N-terminal domain superfamily E3384_10230 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain E3384_10235 IPR011701 Major facilitator superfamily E3384_10235 IPR036259 MFS transporter superfamily E3384_10235 IPR004737 Nitrate transporter E3384_10240 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_10240 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_10240 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_10240 IPR028189 Nitrate reductase, alpha subunit, N-terminal E3384_10240 IPR037943 Nitrate reductase alpha subunit-like, MopB domain E3384_10240 IPR006657 Molybdopterin dinucleotide-binding domain E3384_10240 IPR006468 Nitrate reductase, alpha subunit E3384_10240 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site E3384_10240 IPR006656 Molybdopterin oxidoreductase E3384_10245 IPR029263 Respiratory nitrate reductase beta, C-terminal E3384_10245 IPR006547 Nitrate reductase, beta subunit E3384_10245 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_10245 IPR038262 Nitrate reductase beta, C-terminal domain superfamily E3384_10250 IPR036411 TorD-like superfamily E3384_10250 IPR003765 Nitrate reductase chaperone, NarJ E3384_10250 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 E3384_10250 IPR020945 DMSO/Nitrate reductase chaperone E3384_10250 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 E3384_10255 IPR003816 Nitrate reductase, gamma subunit E3384_10255 IPR023234 NarG-like domain E3384_10255 IPR036197 NarG-like superfamily E3384_10300 IPR004810 Formyltetrahydrofolate deformylase E3384_10300 IPR036477 Formyl transferase, N-terminal domain superfamily E3384_10300 IPR002376 Formyl transferase, N-terminal E3384_10300 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain E3384_10300 IPR002912 ACT domain E3384_10305 IPR023006 Uncharacterised protein family UPF0225 E3384_10305 IPR032710 NTF2-like domain superfamily E3384_10305 IPR004027 SEC-C motif E3384_10310 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase E3384_10310 IPR001423 Lysophospholipase patatin, conserved site E3384_10310 IPR002641 Patatin-like phospholipase domain E3384_10315 IPR001789 Signal transduction response regulator, receiver domain E3384_10315 IPR036457 PPM-type phosphatase domain superfamily E3384_10315 IPR028616 Regulator of RpoS E3384_10315 IPR039420 Transcriptional regulatory protein WalR-like E3384_10315 IPR011006 CheY-like superfamily E3384_10320 IPR029044 Nucleotide-diphospho-sugar transferases E3384_10320 IPR005835 Nucleotidyl transferase domain E3384_10320 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type E3384_10325 IPR027454 Histone-like protein H-NS, N-terminal E3384_10325 IPR001801 Histone-like protein H-NS E3384_10325 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily E3384_10325 IPR027444 Histone-like protein H-NS, C-terminal domain E3384_10330 IPR020633 Thymidine kinase, conserved site E3384_10330 IPR001267 Thymidine kinase E3384_10330 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10335 IPR018211 Alcohol dehydrogenase, iron-type, conserved site E3384_10335 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase E3384_10335 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain E3384_10335 IPR015590 Aldehyde dehydrogenase domain E3384_10335 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_10335 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_10335 IPR016161 Aldehyde/histidinol dehydrogenase E3384_10335 IPR039697 Iron-type alcohol dehydrogenase-like E3384_10335 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA E3384_10340 IPR002771 Multiple antibiotic resistance (MarC)-related E3384_10350 IPR035906 MetI-like superfamily E3384_10350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_10355 IPR035906 MetI-like superfamily E3384_10355 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_10355 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E3384_10360 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10360 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E3384_10360 IPR017871 ABC transporter, conserved site E3384_10360 IPR003439 ABC transporter-like E3384_10360 IPR003593 AAA+ ATPase domain E3384_10365 IPR003439 ABC transporter-like E3384_10365 IPR003593 AAA+ ATPase domain E3384_10365 IPR017871 ABC transporter, conserved site E3384_10365 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E3384_10365 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10370 IPR005821 Ion transport domain E3384_10370 IPR028325 Voltage-gated potassium channel E3384_10370 IPR014710 RmlC-like jelly roll fold E3384_10370 IPR000595 Cyclic nucleotide-binding domain E3384_10370 IPR018488 Cyclic nucleotide-binding, conserved site E3384_10370 IPR018490 Cyclic nucleotide-binding-like E3384_10375 IPR036763 Putative dsDNA mimic superfamily E3384_10375 IPR007376 dsDNA mimic, putative E3384_10380 IPR030840 Cardiolipin synthase A E3384_10380 IPR027379 Cardiolipin synthase N-terminal E3384_10380 IPR025202 Phospholipase D-like domain E3384_10380 IPR001736 Phospholipase D/Transphosphatidylase E3384_10380 IPR022924 Cardiolipin synthase E3384_10390 IPR011008 Dimeric alpha-beta barrel E3384_10390 IPR005545 YCII-related E3384_10395 IPR037682 TonB, C-terminal E3384_10395 IPR006260 TonB/TolA, C-terminal E3384_10395 IPR003538 Gram-negative bacterial TonB protein E3384_10405 IPR006008 Intracellular septation protein A E3384_10410 IPR009627 Uncharacterised protein family UPF0259 E3384_10415 IPR005358 Putative zinc- or iron-chelating domain containing protein E3384_10420 IPR005618 Outer membrane protein, OmpW E3384_10420 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel E3384_10425 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain E3384_10425 IPR027407 Manganese catalase, C-terminal E3384_10425 IPR009078 Ferritin-like superfamily E3384_10425 IPR012347 Ferritin-like E3384_10425 IPR007760 Manganese catalase E3384_10435 IPR010287 Domain of unknown function DUF892 E3384_10435 IPR009078 Ferritin-like superfamily E3384_10435 IPR012347 Ferritin-like E3384_10440 IPR019626 Stress-induced protein, KGG, repeat E3384_10445 IPR002028 Tryptophan synthase, alpha chain E3384_10445 IPR018204 Tryptophan synthase, alpha chain, active site E3384_10445 IPR011060 Ribulose-phosphate binding barrel E3384_10445 IPR013785 Aldolase-type TIM barrel E3384_10450 IPR023026 Tryptophan synthase beta chain/beta chain-like E3384_10450 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme E3384_10450 IPR006654 Tryptophan synthase, beta chain E3384_10450 IPR006653 Tryptophan synthase, beta chain, conserved site E3384_10450 IPR001926 Pyridoxal-phosphate dependent enzyme E3384_10455 IPR011060 Ribulose-phosphate binding barrel E3384_10455 IPR001468 Indole-3-glycerol phosphate synthase, conserved site E3384_10455 IPR013798 Indole-3-glycerol phosphate synthase E3384_10455 IPR013785 Aldolase-type TIM barrel E3384_10455 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) E3384_10460 IPR000312 Glycosyl transferase, family 3 E3384_10460 IPR005940 Anthranilate phosphoribosyl transferase E3384_10460 IPR017459 Glycosyl transferase family 3, N-terminal domain E3384_10460 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily E3384_10460 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily E3384_10460 IPR029062 Class I glutamine amidotransferase-like E3384_10460 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain E3384_10460 IPR017926 Glutamine amidotransferase E3384_10465 IPR015890 Chorismate-utilising enzyme, C-terminal E3384_10465 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial E3384_10465 IPR006805 Anthranilate synthase component I, N-terminal E3384_10465 IPR005801 ADC synthase E3384_10465 IPR019999 Anthranilate synthase component I-like E3384_10470 IPR013205 Leader peptide, tryptophan-operon E3384_10475 IPR016195 Polymerase/histidinol phosphatase-like E3384_10475 IPR004013 PHP domain E3384_10475 IPR003141 Polymerase/histidinol phosphatase, N-terminal E3384_10480 IPR006070 YrdC-like domain E3384_10480 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily E3384_10485 IPR036986 RNA-binding S4 domain superfamily E3384_10485 IPR002942 RNA-binding S4 domain E3384_10485 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site E3384_10485 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F E3384_10485 IPR006145 Pseudouridine synthase, RsuA/RluA E3384_10485 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_10490 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10490 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR E3384_10495 IPR036291 NAD(P)-binding domain superfamily E3384_10495 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_10495 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_10500 IPR013703 Peptidase S49, N-terminal proteobacteria E3384_10500 IPR002142 Peptidase S49 E3384_10500 IPR029045 ClpP/crotonase-like domain superfamily E3384_10505 IPR038191 YciN superfamily E3384_10505 IPR019633 Protein of unknown function DUF2498 E3384_10510 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type E3384_10510 IPR028612 DNA topoisomerase I, type IA E3384_10510 IPR006171 TOPRIM domain E3384_10510 IPR000380 DNA topoisomerase, type IA E3384_10510 IPR023406 DNA topoisomerase, type IA, active site E3384_10510 IPR013498 DNA topoisomerase, type IA, zn finger E3384_10510 IPR003602 DNA topoisomerase, type IA, DNA-binding domain E3384_10510 IPR003601 DNA topoisomerase, type IA, domain 2 E3384_10510 IPR034149 DNA topoisomerase 1, TOPRIM domain E3384_10510 IPR013497 DNA topoisomerase, type IA, central E3384_10510 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 E3384_10510 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 E3384_10510 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 E3384_10510 IPR023405 DNA topoisomerase, type IA, core domain E3384_10510 IPR005733 DNA topoisomerase I, bacterial-type E3384_10520 IPR000847 Transcription regulator HTH, LysR E3384_10520 IPR005119 LysR, substrate-binding E3384_10520 IPR036390 Winged helix DNA-binding domain superfamily E3384_10520 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_10535 IPR006249 Aconitase/Iron-responsive element-binding protein 2 E3384_10535 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel E3384_10535 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 E3384_10535 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain E3384_10535 IPR018136 Aconitase family, 4Fe-4S cluster binding site E3384_10535 IPR036008 Aconitase, iron-sulfur domain E3384_10535 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain E3384_10540 IPR032677 GTP cyclohydrolase II E3384_10540 IPR036144 RibA-like superfamily E3384_10540 IPR000926 GTP cyclohydrolase II, RibA E3384_10545 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase E3384_10545 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily E3384_10550 IPR010445 Lipopolysaccharide assembly protein A domain E3384_10550 IPR032906 Lipopolysaccharide assembly protein A E3384_10555 IPR041166 LapB, rubredoxin metal binding domain E3384_10555 IPR013026 Tetratricopeptide repeat-containing domain E3384_10555 IPR019734 Tetratricopeptide repeat E3384_10555 IPR030865 Lipopolysaccharide assembly protein B E3384_10555 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_10560 IPR014732 Orotidine 5'-phosphate decarboxylase E3384_10560 IPR013785 Aldolase-type TIM barrel E3384_10560 IPR011060 Ribulose-phosphate binding barrel E3384_10560 IPR001754 Orotidine 5'-phosphate decarboxylase domain E3384_10560 IPR018089 Orotidine 5'-phosphate decarboxylase, active site E3384_10565 IPR005872 Archaeal/bacterial translation initiation factor SUI1 E3384_10565 IPR001950 SUI1 domain E3384_10565 IPR036877 SUI1 domain superfamily E3384_10570 IPR008816 Glycine zipper 2TM domain E3384_10575 IPR037171 NagB/RpiA transferase-like E3384_10575 IPR001034 DeoR-type HTH domain E3384_10575 IPR014036 DeoR C-terminal sensor domain E3384_10575 IPR036390 Winged helix DNA-binding domain superfamily E3384_10575 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_10575 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_10580 IPR020887 Uncharacterised protein family UPF0509 E3384_10585 IPR001633 EAL domain E3384_10585 IPR035919 EAL domain superfamily E3384_10585 IPR000160 GGDEF domain E3384_10585 IPR029787 Nucleotide cyclase E3384_10585 IPR000014 PAS domain E3384_10585 IPR035965 PAS domain superfamily E3384_10590 IPR003029 S1 domain E3384_10590 IPR012340 Nucleic acid-binding, OB-fold E3384_10590 IPR013223 Ribonuclease B, N-terminal OB domain E3384_10590 IPR011804 Ribonuclease II E3384_10590 IPR001900 Ribonuclease II/R E3384_10590 IPR022966 Ribonuclease II/R, conserved site E3384_10590 IPR004476 Ribonuclease II/ribonuclease R E3384_10590 IPR040476 RNase II/RNase R, cold shock domain E3384_10590 IPR011129 Cold shock domain E3384_10595 IPR029032 AhpD-like E3384_10600 IPR036291 NAD(P)-binding domain superfamily E3384_10600 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_10600 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) E3384_10625 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10625 IPR017871 ABC transporter, conserved site E3384_10625 IPR003439 ABC transporter-like E3384_10625 IPR003593 AAA+ ATPase domain E3384_10630 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10630 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E3384_10630 IPR003439 ABC transporter-like E3384_10630 IPR003593 AAA+ ATPase domain E3384_10635 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_10635 IPR035906 MetI-like superfamily E3384_10635 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E3384_10640 IPR035906 MetI-like superfamily E3384_10640 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_10645 IPR030678 Peptide/nickel binding protein, MppA-type E3384_10645 IPR039424 Solute-binding protein family 5 E3384_10645 IPR023765 Solute-binding protein family 5, conserved site E3384_10645 IPR000914 Solute-binding protein family 5 domain E3384_10650 IPR014317 Transcription activator PspF E3384_10650 IPR025944 Sigma-54 interaction domain, conserved site E3384_10650 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_10650 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_10650 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10650 IPR002197 DNA binding HTH domain, Fis-type E3384_10650 IPR009057 Homeobox-like domain superfamily E3384_10650 IPR003593 AAA+ ATPase domain E3384_10655 IPR014319 Phage shock protein, PspA E3384_10655 IPR007157 PspA/IM30 E3384_10660 IPR009554 Phage shock protein B E3384_10665 IPR007168 Phage shock protein, PspC, N-terminal E3384_10665 IPR014320 Phage shock protein, PspC E3384_10670 IPR014321 Phage shock protein, PspD E3384_10675 IPR014323 Phage shock protein, PspE E3384_10675 IPR001763 Rhodanese-like domain E3384_10675 IPR036873 Rhodanese-like domain superfamily E3384_10680 IPR007413 Protein of unknown function DUF463, YcjX-like protein E3384_10685 IPR006507 Uncharacterised protein family UPF0283 E3384_10685 IPR021147 Protein of unknown function DUF697 E3384_10690 IPR009057 Homeobox-like domain superfamily E3384_10690 IPR003593 AAA+ ATPase domain E3384_10690 IPR002912 ACT domain E3384_10690 IPR030828 TyrR family, helix-turn-helix domain E3384_10690 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_10690 IPR025944 Sigma-54 interaction domain, conserved site E3384_10690 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_10690 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E3384_10690 IPR035965 PAS domain superfamily E3384_10690 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10690 IPR000014 PAS domain E3384_10695 IPR018219 Thiol peroxidase conserved site E3384_10695 IPR002065 Thiol peroxidase Tpx E3384_10695 IPR013740 Redoxin E3384_10695 IPR036249 Thioredoxin-like superfamily E3384_10695 IPR013766 Thioredoxin domain E3384_10700 IPR029017 Enolase-like, N-terminal E3384_10700 IPR029065 Enolase C-terminal domain-like E3384_10700 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site E3384_10700 IPR034603 Dipeptide epimerase E3384_10700 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain E3384_10700 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal E3384_10700 IPR036849 Enolase-like, C-terminal domain superfamily E3384_10705 IPR000834 Peptidase M14, carboxypeptidase A E3384_10710 IPR039424 Solute-binding protein family 5 E3384_10710 IPR023765 Solute-binding protein family 5, conserved site E3384_10710 IPR000914 Solute-binding protein family 5 domain E3384_10710 IPR030678 Peptide/nickel binding protein, MppA-type E3384_10720 IPR036390 Winged helix DNA-binding domain superfamily E3384_10720 IPR005119 LysR, substrate-binding E3384_10720 IPR000847 Transcription regulator HTH, LysR E3384_10720 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_10725 IPR023210 NADP-dependent oxidoreductase domain E3384_10725 IPR018170 Aldo/keto reductase, conserved site E3384_10725 IPR036812 NADP-dependent oxidoreductase domain superfamily E3384_10725 IPR020471 Aldo/keto reductase E3384_10730 IPR036291 NAD(P)-binding domain superfamily E3384_10730 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_10730 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_10735 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E3384_10735 IPR009057 Homeobox-like domain superfamily E3384_10735 IPR001647 DNA-binding HTH domain, TetR-type E3384_10735 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_10750 IPR018062 HTH domain AraC-type, conserved site E3384_10750 IPR011256 Regulatory factor, effector binding domain superfamily E3384_10750 IPR018060 DNA binding HTH domain, AraC-type E3384_10750 IPR009057 Homeobox-like domain superfamily E3384_10750 IPR029442 GyrI-like small molecule binding domain E3384_10750 IPR020449 Transcription regulator HTH, AraC- type E3384_10770 IPR036249 Thioredoxin-like superfamily E3384_10770 IPR013740 Redoxin E3384_10770 IPR002065 Thiol peroxidase Tpx E3384_10770 IPR018219 Thiol peroxidase conserved site E3384_10770 IPR013766 Thioredoxin domain E3384_10790 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 E3384_10790 IPR010920 LSM domain superfamily E3384_10790 IPR006685 Mechanosensitive ion channel MscS E3384_10790 IPR023408 Mechanosensitive ion channel MscS domain superfamily E3384_10790 IPR006686 Mechanosensitive ion channel MscS, conserved site E3384_10790 IPR011066 Mechanosensitive ion channel MscS, C-terminal E3384_10795 IPR019685 Protein of unknown function DUF2534 E3384_10800 IPR006016 UspA E3384_10805 IPR018490 Cyclic nucleotide-binding-like E3384_10805 IPR014710 RmlC-like jelly roll fold E3384_10805 IPR018335 Transcription regulator HTH, Crp-type, conserved site E3384_10805 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_10805 IPR036390 Winged helix DNA-binding domain superfamily E3384_10805 IPR000595 Cyclic nucleotide-binding domain E3384_10805 IPR012318 Crp-type HTH domain E3384_10810 IPR023546 Methylated-DNA--protein-cysteine methyltransferase E3384_10810 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site E3384_10810 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily E3384_10810 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_10810 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain E3384_10810 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding E3384_10810 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain E3384_10815 IPR002625 Smr domain E3384_10815 IPR036063 Smr domain superfamily E3384_10820 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding E3384_10820 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E3384_10820 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily E3384_10820 IPR004090 Chemotaxis methyl-accepting receptor E3384_10820 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site E3384_10820 IPR003660 HAMP domain E3384_10825 IPR023714 Zinc transport protein ZntB E3384_10825 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB E3384_10835 IPR014014 RNA helicase, DEAD-box type, Q motif E3384_10835 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site E3384_10835 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily E3384_10835 IPR001650 Helicase, C-terminal E3384_10835 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_10835 IPR028619 ATP-dependent RNA helicase DbpA E3384_10835 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10835 IPR011545 DEAD/DEAH box helicase domain E3384_10835 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain E3384_10840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_10840 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type E3384_10840 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase E3384_10840 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal E3384_10850 IPR000390 Small multidrug resistance protein family E3384_10855 IPR006016 UspA E3384_10855 IPR006015 Universal stress protein A family E3384_10855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_10860 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain E3384_10860 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II E3384_10860 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_10860 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_10860 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II E3384_10860 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal E3384_10860 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily E3384_10860 IPR011895 Pyruvate-flavodoxin oxidoreductase E3384_10860 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E3384_10860 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain E3384_10860 IPR029061 Thiamin diphosphate-binding fold E3384_10860 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain E3384_10870 IPR005590 Protein of unknown function DUF333 E3384_10875 IPR005184 Domain of unknown function DUF306, Meta/HslJ E3384_10875 IPR038670 HslJ-like superfamily E3384_10880 IPR036291 NAD(P)-binding domain superfamily E3384_10880 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain E3384_10880 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 E3384_10880 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site E3384_10880 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3384_10885 IPR021730 Dicarboxylate transport E3384_10890 IPR025985 YnbE-like lipoprotein E3384_10895 IPR008309 Uncharacterised conserved protein UCP025560 E3384_10905 IPR023048 NADH-azoreductase, FMN-dependent E3384_10905 IPR003680 Flavodoxin-like fold E3384_10905 IPR029039 Flavoprotein-like superfamily E3384_10910 IPR001650 Helicase, C-terminal E3384_10910 IPR024590 RNA helicase HrpA, C-terminal E3384_10910 IPR003593 AAA+ ATPase domain E3384_10910 IPR011545 DEAD/DEAH box helicase domain E3384_10910 IPR011709 Domain of unknown function DUF1605 E3384_10910 IPR007502 Helicase-associated domain E3384_10910 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_10910 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10910 IPR010222 RNA helicase HrpA E3384_10915 IPR003848 Domain of unknown function DUF218 E3384_10915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_10920 IPR016174 Di-haem cytochrome, transmembrane E3384_10920 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase E3384_10925 IPR013217 Methyltransferase type 12 E3384_10925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_10925 IPR016584 Methyltransferase VrtF-like E3384_10935 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain E3384_10935 IPR035906 MetI-like superfamily E3384_10935 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_10940 IPR003593 AAA+ ATPase domain E3384_10940 IPR003439 ABC transporter-like E3384_10940 IPR017871 ABC transporter, conserved site E3384_10940 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type E3384_10940 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_10945 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain E3384_10945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_10945 IPR035906 MetI-like superfamily E3384_10950 IPR001320 Ionotropic glutamate receptor E3384_10950 IPR018313 Solute-binding protein family 3, conserved site E3384_10950 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E3384_10960 IPR010637 Sif E3384_10960 IPR036514 SGNH hydrolase superfamily E3384_10960 IPR001087 GDSL lipase/esterase E3384_10975 IPR003735 Metal-sensitive transcriptional repressor E3384_10975 IPR038390 Metal-sensitive transcriptional repressor superfamily E3384_10980 IPR011032 GroES-like superfamily E3384_10980 IPR014183 Alcohol dehydrogenase class III E3384_10980 IPR013149 Alcohol dehydrogenase, C-terminal E3384_10980 IPR013154 Alcohol dehydrogenase, N-terminal E3384_10980 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E3384_10980 IPR020843 Polyketide synthase, enoylreductase domain E3384_10980 IPR036291 NAD(P)-binding domain superfamily E3384_10985 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding E3384_10985 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E3384_10985 IPR003660 HAMP domain E3384_10985 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily E3384_10985 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site E3384_10985 IPR004090 Chemotaxis methyl-accepting receptor E3384_10990 IPR036390 Winged helix DNA-binding domain superfamily E3384_10990 IPR005119 LysR, substrate-binding E3384_10990 IPR000847 Transcription regulator HTH, LysR E3384_10990 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_10995 IPR009770 Domain of unknown function DUF1338 E3384_11000 IPR002018 Carboxylesterase, type B E3384_11000 IPR029058 Alpha/Beta hydrolase fold E3384_11000 IPR019819 Carboxylesterase type B, conserved site E3384_11000 IPR000997 Cholinesterase E3384_11000 IPR019826 Carboxylesterase type B, active site E3384_11005 IPR014438 Glucan biosynthesis protein MdoG/MdoD E3384_11005 IPR014718 Glycoside hydrolase-type carbohydrate-binding E3384_11005 IPR023724 Glucan biosynthesis, MdoD E3384_11005 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal E3384_11005 IPR014756 Immunoglobulin E-set E3384_11005 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_11005 IPR011013 Galactose mutarotase-like domain superfamily E3384_11005 IPR013783 Immunoglobulin-like fold E3384_11005 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_11010 IPR007372 Lipid/polyisoprenoid-binding, YceI-like E3384_11010 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily E3384_11010 IPR023480 Uncharacterised protein family UPF0312/YceI E3384_11015 IPR014080 L-lactate oxidase E3384_11015 IPR037396 FMN hydroxy acid dehydrogenase domain E3384_11015 IPR013785 Aldolase-type TIM barrel E3384_11015 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent E3384_11015 IPR000262 FMN-dependent dehydrogenase E3384_11020 IPR024170 Aminoglycoside N6-acetyltransferase E3384_11020 IPR000182 GNAT domain E3384_11020 IPR016181 Acyl-CoA N-acyltransferase E3384_11025 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_11025 IPR037171 NagB/RpiA transferase-like E3384_11025 IPR014036 DeoR C-terminal sensor domain E3384_11025 IPR001034 DeoR-type HTH domain E3384_11030 IPR013785 Aldolase-type TIM barrel E3384_11030 IPR000056 Ribulose-phosphate 3-epimerase-like E3384_11030 IPR011060 Ribulose-phosphate binding barrel E3384_11035 IPR016152 Phosphotransferase/anion transporter E3384_11035 IPR002178 PTS EIIA type-2 domain E3384_11040 IPR005137 Membrane complex biogenesis protein, BtpA family E3384_11040 IPR011060 Ribulose-phosphate binding barrel E3384_11045 IPR004703 Phosphotransferase system, sugar-specific permease component E3384_11045 IPR013853 Galactitol permease IIC component E3384_11045 IPR013014 Phosphotransferase system, EIIC component, type 2 E3384_11050 IPR036095 PTS system IIB component-like superfamily E3384_11050 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_11050 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_11055 IPR008007 Peptidase M42 E3384_11055 IPR023367 Peptidase M42, domain 2 E3384_11060 IPR016181 Acyl-CoA N-acyltransferase E3384_11060 IPR000182 GNAT domain E3384_11065 IPR040831 Beta solenoid repeat from YDCK E3384_11065 IPR011004 Trimeric LpxA-like superfamily E3384_11070 IPR004695 Voltage-dependent anion channel E3384_11070 IPR038665 Voltage-dependent anion channel superfamily E3384_11070 IPR011552 Tellurite resistance protein TehA/malic acid transport protein E3384_11070 IPR039264 Tellurite resistance protein TehA E3384_11075 IPR004537 Tellurite resistance methyltransferase, TehB E3384_11075 IPR015985 Tellurite resistance methyltransferase TehB-like domain E3384_11075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_11080 IPR021747 Protein of unknown function DUF3313 E3384_11085 IPR004711 Benzoate transporter E3384_11090 IPR011051 RmlC-like cupin domain superfamily E3384_11090 IPR013096 Cupin 2, conserved barrel E3384_11090 IPR001387 Cro/C1-type helix-turn-helix domain E3384_11090 IPR014710 RmlC-like jelly roll fold E3384_11090 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_11095 IPR001539 Peptidase U32 E3384_11095 IPR020988 Peptidase U32, collagenase E3384_11100 IPR020117 Uncharacterised protein family YncJ E3384_11105 IPR010637 Sif E3384_11120 IPR000755 D-alanyl-D-alanine dipeptidase E3384_11120 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily E3384_11125 IPR036390 Winged helix DNA-binding domain superfamily E3384_11125 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_11125 IPR000524 Transcription regulator HTH, GntR E3384_11125 IPR015424 Pyridoxal phosphate-dependent transferase E3384_11125 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_11125 IPR004839 Aminotransferase, class I/classII E3384_11125 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_11130 IPR015590 Aldehyde dehydrogenase domain E3384_11130 IPR017749 1-pyrroline dehydrogenase E3384_11130 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_11130 IPR029510 Aldehyde dehydrogenase, glutamic acid active site E3384_11130 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_11130 IPR016161 Aldehyde/histidinol dehydrogenase E3384_11130 IPR015657 Aminobutyraldehyde dehydrogenase E3384_11140 IPR019689 Toxin GhoT/OrtT E3384_11160 IPR019671 Protein of unknown function DUF2526 E3384_11165 IPR006750 Putative inner membrane exporter, YdcZ E3384_11170 IPR000182 GNAT domain E3384_11170 IPR016181 Acyl-CoA N-acyltransferase E3384_11175 IPR020843 Polyketide synthase, enoylreductase domain E3384_11175 IPR013149 Alcohol dehydrogenase, C-terminal E3384_11175 IPR041694 Oxidoreductase, N-terminal domain E3384_11175 IPR011032 GroES-like superfamily E3384_11175 IPR036291 NAD(P)-binding domain superfamily E3384_11180 IPR000524 Transcription regulator HTH, GntR E3384_11180 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_11180 IPR011711 GntR, C-terminal E3384_11180 IPR036390 Winged helix DNA-binding domain superfamily E3384_11180 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_11185 IPR039426 Vitamin B12 transporter BtuB-like E3384_11185 IPR000531 TonB-dependent receptor-like, beta-barrel E3384_11185 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily E3384_11185 IPR010105 TonB-dependent siderophore receptor E3384_11185 IPR012910 TonB-dependent receptor, plug domain E3384_11185 IPR037066 TonB-dependent receptor, plug domain superfamily E3384_11190 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily E3384_11190 IPR015943 WD40/YVTN repeat-like-containing domain superfamily E3384_11195 IPR010920 LSM domain superfamily E3384_11195 IPR010305 Protein of unknown function DUF903 E3384_11200 IPR004840 Amino acid permease, conserved site E3384_11200 IPR004841 Amino acid permease/ SLC12A domain E3384_11215 IPR038765 Papain-like cysteine peptidase superfamily E3384_11215 IPR001447 Arylamine N-acetyltransferase E3384_11220 IPR003719 Phenazine biosynthesis PhzF protein E3384_11225 IPR023234 NarG-like domain E3384_11225 IPR036197 NarG-like superfamily E3384_11225 IPR003816 Nitrate reductase, gamma subunit E3384_11230 IPR003765 Nitrate reductase chaperone, NarJ E3384_11230 IPR036411 TorD-like superfamily E3384_11230 IPR020945 DMSO/Nitrate reductase chaperone E3384_11235 IPR038262 Nitrate reductase beta, C-terminal domain superfamily E3384_11235 IPR006547 Nitrate reductase, beta subunit E3384_11235 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_11235 IPR029263 Respiratory nitrate reductase beta, C-terminal E3384_11240 IPR006657 Molybdopterin dinucleotide-binding domain E3384_11240 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_11240 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_11240 IPR037943 Nitrate reductase alpha subunit-like, MopB domain E3384_11240 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site E3384_11240 IPR006468 Nitrate reductase, alpha subunit E3384_11240 IPR028189 Nitrate reductase, alpha subunit, N-terminal E3384_11240 IPR006656 Molybdopterin oxidoreductase E3384_11240 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_11245 IPR004737 Nitrate transporter E3384_11245 IPR036259 MFS transporter superfamily E3384_11245 IPR011701 Major facilitator superfamily E3384_11250 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_11250 IPR009057 Homeobox-like domain superfamily E3384_11250 IPR001647 DNA-binding HTH domain, TetR-type E3384_11255 IPR011701 Major facilitator superfamily E3384_11255 IPR020846 Major facilitator superfamily domain E3384_11255 IPR036259 MFS transporter superfamily E3384_11265 IPR023614 Porin domain superfamily E3384_11265 IPR001702 Porin, Gram-negative type E3384_11265 IPR013793 Porin, Gram-negative type, conserved site E3384_11265 IPR001897 Porin, gammaproteobacterial E3384_11265 IPR033900 Porin domain, Gram-negative type E3384_11270 IPR000620 EamA domain E3384_11280 IPR015246 Formate dehydrogenase, transmembrane E3384_11280 IPR014603 Formate dehydrogenase iron-sulphur subunit E3384_11280 IPR038384 Formate dehydrogenase, C-terminal domain superfamily E3384_11280 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria E3384_11280 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_11280 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_11285 IPR006471 Formate dehydrogenase, gamma subunit E3384_11285 IPR016174 Di-haem cytochrome, transmembrane E3384_11285 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase E3384_11290 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E3384_11290 IPR011032 GroES-like superfamily E3384_11290 IPR036291 NAD(P)-binding domain superfamily E3384_11290 IPR013154 Alcohol dehydrogenase, N-terminal E3384_11290 IPR013149 Alcohol dehydrogenase, C-terminal E3384_11290 IPR020843 Polyketide synthase, enoylreductase domain E3384_11295 IPR015884 Malic enzyme, conserved site E3384_11295 IPR012301 Malic enzyme, N-terminal domain E3384_11295 IPR037062 Malic enzyme, N-terminal domain superfamily E3384_11295 IPR012302 Malic enzyme, NAD-binding E3384_11295 IPR036291 NAD(P)-binding domain superfamily E3384_11295 IPR023667 NAD-dependent malic enzyme, proteobacteria E3384_11295 IPR001891 Malic oxidoreductase E3384_11300 IPR012607 Ribosomal protein S22 E3384_11305 IPR019625 Biofilm-dependent modulation protein Bdm, putative E3384_11310 IPR015946 K homology domain-like, alpha/beta E3384_11310 IPR019904 Peroxiredoxin OsmC E3384_11310 IPR036102 OsmC/Ohr superfamily E3384_11310 IPR003718 OsmC/Ohr family E3384_11315 IPR038303 HNS-dependent expression A/B superfamily E3384_11315 IPR028623 HNS-dependent expression B E3384_11315 IPR010486 HNS-dependent expression A/B E3384_11325 IPR017853 Glycoside hydrolase superfamily E3384_11325 IPR014756 Immunoglobulin E-set E3384_11325 IPR013783 Immunoglobulin-like fold E3384_11325 IPR012768 Malto-oligosyltrehalose trehalohydrolase E3384_11325 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E3384_11325 IPR013780 Glycosyl hydrolase, all-beta E3384_11325 IPR004193 Glycoside hydrolase, family 13, N-terminal E3384_11325 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) E3384_11330 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E3384_11330 IPR012767 Maltooligosyl trehalose synthase E3384_11330 IPR017853 Glycoside hydrolase superfamily E3384_11335 IPR011837 Glycogen debranching enzyme, GlgX type E3384_11335 IPR017853 Glycoside hydrolase superfamily E3384_11335 IPR014756 Immunoglobulin E-set E3384_11335 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E3384_11335 IPR004193 Glycoside hydrolase, family 13, N-terminal E3384_11335 IPR013780 Glycosyl hydrolase, all-beta E3384_11335 IPR013783 Immunoglobulin-like fold E3384_11340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_11340 IPR015424 Pyridoxal phosphate-dependent transferase E3384_11340 IPR027619 Putative C-S lyase E3384_11340 IPR004839 Aminotransferase, class I/classII E3384_11340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_11345 IPR004770 Na+/H+ antiporter NhaC E3384_11345 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal E3384_11350 IPR028082 Periplasmic binding protein-like I E3384_11350 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_11350 IPR000843 LacI-type HTH domain E3384_11395 IPR035959 RutC-like superfamily E3384_11395 IPR006175 YjgF/YER057c/UK114 family E3384_11395 IPR038743 YjgH-like E3384_11400 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily E3384_11400 IPR042119 QueA, domain 2 E3384_11400 IPR042118 QueA, domain 1 E3384_11400 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA E3384_11410 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_11410 IPR002938 FAD-binding domain E3384_11415 IPR004734 Multidrug resistance protein E3384_11415 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG E3384_11415 IPR011701 Major facilitator superfamily E3384_11415 IPR036259 MFS transporter superfamily E3384_11415 IPR005829 Sugar transporter, conserved site E3384_11415 IPR020846 Major facilitator superfamily domain E3384_11425 IPR011701 Major facilitator superfamily E3384_11425 IPR020846 Major facilitator superfamily domain E3384_11425 IPR036259 MFS transporter superfamily E3384_11425 IPR000849 Sugar phosphate transporter E3384_11430 IPR036291 NAD(P)-binding domain superfamily E3384_11430 IPR013154 Alcohol dehydrogenase, N-terminal E3384_11430 IPR011032 GroES-like superfamily E3384_11430 IPR013149 Alcohol dehydrogenase, C-terminal E3384_11435 IPR011711 GntR, C-terminal E3384_11435 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_11435 IPR000524 Transcription regulator HTH, GntR E3384_11435 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_11435 IPR036390 Winged helix DNA-binding domain superfamily E3384_11445 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit E3384_11445 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_11445 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_11445 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily E3384_11445 IPR027394 Cytochrome-c3 hydrogenase, C-terminal E3384_11445 IPR001821 [NiFe]-hydrogenase, small subunit E3384_11445 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily E3384_11450 IPR001501 Nickel-dependent hydrogenase, large subunit E3384_11450 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site E3384_11450 IPR029014 [NiFe]-hydrogenase, large subunit E3384_11455 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit E3384_11455 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase E3384_11455 IPR016174 Di-haem cytochrome, transmembrane E3384_11460 IPR023430 Peptidase HybD-like domain superfamily E3384_11460 IPR004419 Peptidase A31, hydrogenase expression/formation protein E3384_11460 IPR000671 Peptidase A31 family E3384_11465 IPR019812 Hydrogenase assembly chaperone, conserved site E3384_11465 IPR001109 Hydrogenase expression/formation protein, HupF/HypC E3384_11465 IPR037254 HupF/HypC superfamily E3384_11475 IPR006894 HupH hydrogenase expression protein, C-terminal E3384_11475 IPR038527 HupH, C-terminal domain superfamily E3384_11485 IPR000688 Hydrogenase maturation factor HypA/HybF E3384_11485 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site E3384_11490 IPR023614 Porin domain superfamily E3384_11490 IPR001897 Porin, gammaproteobacterial E3384_11490 IPR001702 Porin, Gram-negative type E3384_11490 IPR013793 Porin, Gram-negative type, conserved site E3384_11500 IPR021134 Bestrophin/UPF0187 E3384_11505 IPR020378 Protein of unknown function DUF4186 E3384_11510 IPR012338 Beta-lactamase/transpeptidase-like E3384_11510 IPR015868 Glutaminase E3384_11515 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_11515 IPR016160 Aldehyde dehydrogenase, cysteine active site E3384_11515 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_11515 IPR016161 Aldehyde/histidinol dehydrogenase E3384_11515 IPR015590 Aldehyde dehydrogenase domain E3384_11520 IPR036390 Winged helix DNA-binding domain superfamily E3384_11520 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_11520 IPR000847 Transcription regulator HTH, LysR E3384_11520 IPR005119 LysR, substrate-binding E3384_11525 IPR011701 Major facilitator superfamily E3384_11525 IPR020846 Major facilitator superfamily domain E3384_11525 IPR036259 MFS transporter superfamily E3384_11525 IPR023495 Sugar efflux transporter, putative E3384_11530 IPR002771 Multiple antibiotic resistance (MarC)-related E3384_11535 IPR000835 MarR-type HTH domain E3384_11535 IPR023187 Transcriptional regulator MarR-type, conserved site E3384_11535 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_11535 IPR036390 Winged helix DNA-binding domain superfamily E3384_11540 IPR018062 HTH domain AraC-type, conserved site E3384_11540 IPR009057 Homeobox-like domain superfamily E3384_11540 IPR018060 DNA binding HTH domain, AraC-type E3384_11545 IPR025732 MarB protein E3384_11550 IPR000620 EamA domain E3384_11555 IPR036259 MFS transporter superfamily E3384_11555 IPR020846 Major facilitator superfamily domain E3384_11555 IPR011701 Major facilitator superfamily E3384_11565 IPR005220 Bacterial OB-fold E3384_11565 IPR036700 Bacterial OB-fold superfamily E3384_11565 IPR016052 Bacteriophage 933W, L0136 E3384_11570 IPR036653 CinA-like, C-terminal E3384_11570 IPR008136 CinA, C-terminal E3384_11575 IPR019626 Stress-induced protein, KGG, repeat E3384_11585 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 E3384_11585 IPR001567 Peptidase M3A/M3B catalytic domain E3384_11590 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_11590 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_11590 IPR036291 NAD(P)-binding domain superfamily E3384_11595 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_11595 IPR011711 GntR, C-terminal E3384_11595 IPR036390 Winged helix DNA-binding domain superfamily E3384_11595 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_11595 IPR000524 Transcription regulator HTH, GntR E3384_11600 IPR017704 Putative selenium-binding protein YdfZ E3384_11605 IPR000669 Mannitol dehydrogenase E3384_11605 IPR013118 Mannitol dehydrogenase, C-terminal E3384_11605 IPR023027 Mannitol dehydrogenase, conserved site E3384_11605 IPR013131 Mannitol dehydrogenase, N-terminal E3384_11605 IPR036291 NAD(P)-binding domain superfamily E3384_11605 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_11605 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_11610 IPR011701 Major facilitator superfamily E3384_11610 IPR004736 MFS transporter, metabolite:H symporter E3384_11610 IPR036259 MFS transporter superfamily E3384_11610 IPR020846 Major facilitator superfamily domain E3384_11610 IPR005828 Major facilitator, sugar transporter-like E3384_11615 IPR036291 NAD(P)-binding domain superfamily E3384_11615 IPR011032 GroES-like superfamily E3384_11615 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E3384_11615 IPR013149 Alcohol dehydrogenase, C-terminal E3384_11615 IPR013154 Alcohol dehydrogenase, N-terminal E3384_11620 IPR034593 Mandelate racemase-like E3384_11620 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain E3384_11620 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site E3384_11620 IPR029065 Enolase C-terminal domain-like E3384_11620 IPR029017 Enolase-like, N-terminal E3384_11620 IPR036849 Enolase-like, C-terminal domain superfamily E3384_11620 IPR034589 D-mannonate dehydratase-like E3384_11620 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal E3384_11625 IPR003844 Uncharacterised protein family UPF0060 E3384_11630 IPR009700 Protein of unknown function DUF1283 E3384_11635 IPR000182 GNAT domain E3384_11635 IPR016181 Acyl-CoA N-acyltransferase E3384_11640 IPR010646 Uncharacterised protein family UPF0257 E3384_11645 IPR010595 Protein of unknown function DUF1161 E3384_11650 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_11650 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE E3384_11650 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_11650 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_11650 IPR006656 Molybdopterin oxidoreductase E3384_11650 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_11650 IPR006657 Molybdopterin dinucleotide-binding domain E3384_11655 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_11655 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site E3384_11655 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_11655 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_11655 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_11655 IPR006657 Molybdopterin dinucleotide-binding domain E3384_11655 IPR006656 Molybdopterin oxidoreductase E3384_11655 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE E3384_11660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_11660 IPR014297 Dimethylsulphoxide reductase, chain B E3384_11660 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_11665 IPR007059 DMSO reductase anchor subunit (DmsC) E3384_11670 IPR020945 DMSO/Nitrate reductase chaperone E3384_11670 IPR028611 Tat proofreading chaperone DmsD E3384_11670 IPR036411 TorD-like superfamily E3384_11670 IPR026269 Tat proofreading chaperone DmsD-type E3384_11675 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_11675 IPR035906 MetI-like superfamily E3384_11680 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain E3384_11685 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_11685 IPR035906 MetI-like superfamily E3384_11690 IPR000644 CBS domain E3384_11690 IPR003593 AAA+ ATPase domain E3384_11690 IPR003439 ABC transporter-like E3384_11690 IPR017871 ABC transporter, conserved site E3384_11690 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_11690 IPR005892 Glycine betaine transport ATP-binding subunit E3384_11695 IPR023790 Chloride channel, voltage-gated, ClcB E3384_11695 IPR014743 Chloride channel, core E3384_11695 IPR001807 Chloride channel, voltage gated E3384_11700 IPR004472 Dethiobiotin synthase BioD E3384_11700 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_11705 IPR036390 Winged helix DNA-binding domain superfamily E3384_11705 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_11705 IPR000600 ROK family E3384_11710 IPR005119 LysR, substrate-binding E3384_11710 IPR000847 Transcription regulator HTH, LysR E3384_11710 IPR036390 Winged helix DNA-binding domain superfamily E3384_11710 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_11715 IPR005829 Sugar transporter, conserved site E3384_11715 IPR011701 Major facilitator superfamily E3384_11715 IPR036259 MFS transporter superfamily E3384_11715 IPR020846 Major facilitator superfamily domain E3384_11725 IPR009003 Peptidase S1, PA clan E3384_11725 IPR008256 Peptidase S1B E3384_11725 IPR001254 Serine proteases, trypsin domain E3384_11725 IPR033116 Serine proteases, trypsin family, serine active site E3384_11725 IPR018114 Serine proteases, trypsin family, histidine active site E3384_11730 IPR023737 Spermidine export protein MdtI E3384_11730 IPR000390 Small multidrug resistance protein family E3384_11735 IPR000390 Small multidrug resistance protein family E3384_11735 IPR023740 Spermidine export protein MdtJ E3384_11745 IPR002549 Transmembrane protein TqsA-like E3384_11750 IPR012136 NADP transhydrogenase, beta subunit E3384_11750 IPR034300 NADP transhydrogenase beta-like domain E3384_11750 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_11755 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal E3384_11755 IPR036291 NAD(P)-binding domain superfamily E3384_11755 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 E3384_11755 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 E3384_11755 IPR026255 NAD(P) transhydrogenase, alpha subunit E3384_11755 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal E3384_11755 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain E3384_11760 IPR036275 YdgH-like superfamily E3384_11760 IPR025543 Dodecin-like E3384_11760 IPR010854 Domain of unknown function DUF1471 E3384_11760 IPR025539 YdgH protein E3384_11765 IPR002293 Amino acid/polyamine transporter I E3384_11765 IPR004754 Amino acid antiporter E3384_11770 IPR009707 Membrane protein GlpM/YdgC E3384_11775 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_11775 IPR011006 CheY-like superfamily E3384_11775 IPR016032 Signal transduction response regulator, C-terminal effector E3384_11775 IPR001789 Signal transduction response regulator, receiver domain E3384_11775 IPR039420 Transcriptional regulatory protein WalR-like E3384_11775 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_11785 IPR001702 Porin, Gram-negative type E3384_11785 IPR001897 Porin, gammaproteobacterial E3384_11785 IPR023614 Porin domain superfamily E3384_11785 IPR033900 Porin domain, Gram-negative type E3384_11790 IPR006679 Adenine deaminase E3384_11790 IPR026912 Adenine deaminase C-terminal domain E3384_11790 IPR006680 Amidohydrolase-related E3384_11790 IPR032466 Metal-dependent hydrolase E3384_11790 IPR011059 Metal-dependent hydrolase, composite domain superfamily E3384_11795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_11795 IPR003594 Histidine kinase/HSP90-like ATPase E3384_11795 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_11795 IPR003660 HAMP domain E3384_11795 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_11795 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_11795 IPR005467 Histidine kinase domain E3384_11800 IPR008865 DNA replication terminus site-binding protein E3384_11800 IPR036384 Replication terminator Tus superfamily E3384_11800 IPR036381 Replication terminator Tus, domain 1 E3384_11805 IPR024083 Fumarase/histidase, N-terminal E3384_11805 IPR018951 Fumarase C, C-terminal E3384_11805 IPR008948 L-Aspartase-like E3384_11805 IPR022761 Fumarate lyase, N-terminal E3384_11805 IPR000362 Fumarate lyase family E3384_11805 IPR020557 Fumarate lyase, conserved site E3384_11805 IPR005677 Fumarate hydratase, class II E3384_11810 IPR020557 Fumarate lyase, conserved site E3384_11810 IPR011167 Iron-dependent fumarate hydratase E3384_11810 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily E3384_11810 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain E3384_11810 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain E3384_11815 IPR018050 Phosphomannose isomerase, type I, conserved site E3384_11815 IPR001250 Mannose-6-phosphate isomerase, type I E3384_11815 IPR016305 Mannose-6-phosphate isomerase E3384_11815 IPR011051 RmlC-like cupin domain superfamily E3384_11815 IPR014710 RmlC-like jelly roll fold E3384_11820 IPR010352 Protein of unknown function DUF945 E3384_11830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_11830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_11830 IPR015424 Pyridoxal phosphate-dependent transferase E3384_11830 IPR027619 Putative C-S lyase E3384_11830 IPR004839 Aminotransferase, class I/classII E3384_11835 IPR006650 Adenosine/AMP deaminase active site E3384_11835 IPR001365 Adenosine/AMP deaminase domain E3384_11835 IPR032466 Metal-dependent hydrolase E3384_11835 IPR006330 Adenosine/adenine deaminase E3384_11835 IPR028893 Adenosine deaminase E3384_11840 IPR000683 Oxidoreductase, N-terminal E3384_11840 IPR036291 NAD(P)-binding domain superfamily E3384_11840 IPR004104 Oxidoreductase, C-terminal E3384_11850 IPR036666 HHA superfamily E3384_11850 IPR007985 Haemolysin expression modulating, HHA E3384_11855 IPR019690 Protein of unknown function DUF2569 E3384_11860 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA E3384_11860 IPR003667 NqrDE/RnfAE E3384_11865 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria E3384_11865 IPR007202 4Fe-4S domain E3384_11865 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_11865 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_11865 IPR011005 Dihydropteroate synthase-like E3384_11865 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB E3384_11870 IPR009051 Alpha-helical ferredoxin E3384_11870 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_11870 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_11870 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain E3384_11870 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily E3384_11870 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC E3384_11870 IPR026902 RnfC Barrel sandwich hybrid domain E3384_11870 IPR019554 Soluble ligand binding domain E3384_11875 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D E3384_11875 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD E3384_11880 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG E3384_11880 IPR007329 FMN-binding E3384_11885 IPR010968 Ion-translocating oxidoreductase complex subunit E E3384_11885 IPR003667 NqrDE/RnfAE E3384_11890 IPR011257 DNA glycosylase E3384_11890 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif E3384_11890 IPR004035 Endonuclease III, iron-sulphur binding site E3384_11890 IPR003265 HhH-GPD domain E3384_11890 IPR000445 Helix-hairpin-helix motif E3384_11890 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal E3384_11890 IPR005759 Endonuclease III E3384_11890 IPR004036 Endonuclease III-like, conserved site-2 E3384_11895 IPR036259 MFS transporter superfamily E3384_11895 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A E3384_11895 IPR000109 Proton-dependent oligopeptide transporter family E3384_11895 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site E3384_11895 IPR020846 Major facilitator superfamily domain E3384_11895 IPR005279 Dipeptide/tripeptide permease E3384_11900 IPR036249 Thioredoxin-like superfamily E3384_11900 IPR004046 Glutathione S-transferase, C-terminal E3384_11900 IPR004045 Glutathione S-transferase, N-terminal E3384_11900 IPR040079 Glutathione Transferase family E3384_11900 IPR036282 Glutathione S-transferase, C-terminal domain superfamily E3384_11900 IPR010987 Glutathione S-transferase, C-terminal-like E3384_11905 IPR029056 Ribokinase-like E3384_11905 IPR023685 Pyridoxal kinase PdxY E3384_11905 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase E3384_11905 IPR004625 Pyridoxine kinase E3384_11910 IPR036986 RNA-binding S4 domain superfamily E3384_11910 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E3384_11910 IPR002305 Aminoacyl-tRNA synthetase, class Ic E3384_11910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_11910 IPR002942 RNA-binding S4 domain E3384_11910 IPR002307 Tyrosine-tRNA ligase E3384_11910 IPR024088 Tyrosine-tRNA ligase, bacterial-type E3384_11910 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 E3384_11915 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site E3384_11915 IPR012349 FMN-binding split barrel E3384_11915 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal E3384_11915 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative E3384_11915 IPR000659 Pyridoxamine 5'-phosphate oxidase E3384_11920 IPR036328 C-type lysozyme inhibitor superfamily E3384_11920 IPR018660 C-type lysozyme inhibitor E3384_11925 IPR005338 Anhydro-N-acetylmuramic acid kinase E3384_11930 IPR008816 Glycine zipper 2TM domain E3384_11935 IPR036390 Winged helix DNA-binding domain superfamily E3384_11935 IPR023187 Transcriptional regulator MarR-type, conserved site E3384_11935 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_11935 IPR023071 Transcriptional regulator, SlyA E3384_11935 IPR000835 MarR-type HTH domain E3384_11940 IPR012451 Protein of unknown function DUF1656 E3384_11945 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain E3384_11945 IPR006143 RND efflux pump, membrane fusion protein E3384_11950 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein E3384_11955 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone E3384_11955 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily E3384_11955 IPR001424 Superoxide dismutase, copper/zinc binding domain E3384_11955 IPR018152 Superoxide dismutase, copper/zinc, binding site E3384_11960 IPR020471 Aldo/keto reductase E3384_11960 IPR036812 NADP-dependent oxidoreductase domain superfamily E3384_11960 IPR023210 NADP-dependent oxidoreductase domain E3384_11965 IPR010710 Protein of unknown function DUF1289 E3384_11970 IPR009057 Homeobox-like domain superfamily E3384_11970 IPR001647 DNA-binding HTH domain, TetR-type E3384_11970 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_11970 IPR011075 Tetracyclin repressor-like, C-terminal domain E3384_11975 IPR013785 Aldolase-type TIM barrel E3384_11975 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal E3384_11980 IPR037523 Vicinal oxygen chelate (VOC) domain E3384_11980 IPR004361 Glyoxalase I E3384_11980 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain E3384_11980 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase E3384_11980 IPR018146 Glyoxalase I, conserved site E3384_11985 IPR036397 Ribonuclease H superfamily E3384_11985 IPR013520 Exonuclease, RNase T/DNA polymerase III E3384_11985 IPR012337 Ribonuclease H-like superfamily E3384_11985 IPR005987 Ribonuclease T E3384_11995 IPR036249 Thioredoxin-like superfamily E3384_11995 IPR004480 Monothiol glutaredoxin-related E3384_11995 IPR002109 Glutaredoxin E3384_11995 IPR033658 Glutaredoxin, PICOT-like E3384_11995 IPR014434 Monothiol glutaredoxin E3384_12000 IPR038765 Papain-like cysteine peptidase superfamily E3384_12000 IPR000064 Endopeptidase, NLPC/P60 domain E3384_12005 IPR019832 Manganese/iron superoxide dismutase, C-terminal E3384_12005 IPR019831 Manganese/iron superoxide dismutase, N-terminal E3384_12005 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily E3384_12005 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily E3384_12005 IPR019833 Manganese/iron superoxide dismutase, binding site E3384_12005 IPR001189 Manganese/iron superoxide dismutase E3384_12015 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_12015 IPR000843 LacI-type HTH domain E3384_12015 IPR028082 Periplasmic binding protein-like I E3384_12015 IPR023588 Transcription regulator HTH, PurR E3384_12020 IPR000847 Transcription regulator HTH, LysR E3384_12020 IPR005119 LysR, substrate-binding E3384_12020 IPR036390 Winged helix DNA-binding domain superfamily E3384_12020 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_12025 IPR011701 Major facilitator superfamily E3384_12025 IPR036259 MFS transporter superfamily E3384_12025 IPR004812 Drug resistance transporter Bcr/CmlA subfamily E3384_12025 IPR020846 Major facilitator superfamily domain E3384_12030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_12030 IPR003333 Mycolic acid cyclopropane synthase E3384_12035 IPR017938 Riboflavin synthase-like beta-barrel E3384_12035 IPR026017 Lumazine-binding domain E3384_12035 IPR001783 Lumazine-binding protein E3384_12035 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily E3384_12040 IPR002528 Multi antimicrobial extrusion protein E3384_12040 IPR022913 Multidrug resistance protein MdtK E3384_12055 IPR006307 Type III exporter system, secretion apparatus protein BsaZ E3384_12055 IPR006135 Type III secretion system substrate exporter E3384_12055 IPR029025 Type III secretion system substrate exporter, C-terminal E3384_12060 IPR006304 Type III secretion protein SpaR/YscT E3384_12060 IPR002010 Type III secretion system inner membrane R protein E3384_12065 IPR002191 Bacterial export protein family 3 E3384_12065 IPR006306 Type III secretion protein HrpO E3384_12070 IPR005773 Yop virulence translocation protein R E3384_12070 IPR005838 Type III secretion system inner membrane P protein E3384_12075 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO E3384_12075 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb E3384_12075 IPR001543 Surface presentation of antigen (SpoA) E3384_12075 IPR036429 SpoA-like superfamily E3384_12090 IPR040627 T3SS EscN ATPase, C-terminal E3384_12090 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_12090 IPR003593 AAA+ ATPase domain E3384_12090 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain E3384_12090 IPR005714 ATPase, type III secretion system, FliI/YscN E3384_12090 IPR013380 ATPase, type III secretion system, H+-transporting E3384_12095 IPR025505 FHIPEP conserved site E3384_12095 IPR001712 Type III secretion system FHIPEP E3384_12095 IPR006302 Type III secretion protein HrcV E3384_12095 IPR042193 FHIPEP, domain 3 E3384_12095 IPR042196 FHIPEP, domain 4 E3384_12100 IPR017033 Type III secretion system apparatus protein SsaM E3384_12105 IPR010812 Hypersensitivity response secretion-like, HrpJ E3384_12105 IPR013351 Type III secretion system effector delivery regulator TyeA-related E3384_12110 IPR012842 Type III secretion system HrpE/YscL E3384_12120 IPR006182 Secretory protein YscJ/FliF E3384_12120 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ E3384_12160 IPR008611 Protein EaeB E3384_12165 IPR006972 Secretion system effector C, SseC-like E3384_12175 IPR035074 EspA/CesA-like E3384_12175 IPR005095 EspA-like secreted protein E3384_12205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_12205 IPR001789 Signal transduction response regulator, receiver domain E3384_12205 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_12205 IPR036641 HPT domain superfamily E3384_12205 IPR019247 Histidine kinase BarA, N-terminal E3384_12205 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_12205 IPR005467 Histidine kinase domain E3384_12205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_12205 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain E3384_12205 IPR003594 Histidine kinase/HSP90-like ATPase E3384_12205 IPR011006 CheY-like superfamily E3384_12205 IPR003660 HAMP domain E3384_12210 IPR016032 Signal transduction response regulator, C-terminal effector E3384_12210 IPR011006 CheY-like superfamily E3384_12210 IPR001789 Signal transduction response regulator, receiver domain E3384_12210 IPR000792 Transcription regulator LuxR, C-terminal E3384_12215 IPR009061 Putative DNA-binding domain superfamily E3384_12215 IPR000551 MerR-type HTH domain E3384_12220 IPR013560 Domain of unknown function DUF1722 E3384_12225 IPR024493 Fumarase D E3384_12230 IPR001789 Signal transduction response regulator, receiver domain E3384_12230 IPR011006 CheY-like superfamily E3384_12230 IPR000792 Transcription regulator LuxR, C-terminal E3384_12230 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_12235 IPR005467 Histidine kinase domain E3384_12235 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_12235 IPR003594 Histidine kinase/HSP90-like ATPase E3384_12235 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_12235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_12235 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_12240 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_12240 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_12240 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_12245 IPR005614 NrfD family E3384_12250 IPR037946 Tetrathionate reductase subunit A, MopB domain E3384_12250 IPR006657 Molybdopterin dinucleotide-binding domain E3384_12250 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_12250 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_12250 IPR041929 Tetrathionate reductase subunit A, N-terminal E3384_12250 IPR006656 Molybdopterin oxidoreductase E3384_12255 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_12255 IPR011877 Ribokinase E3384_12255 IPR029056 Ribokinase-like E3384_12255 IPR011611 Carbohydrate kinase PfkB E3384_12255 IPR002139 Ribokinase/fructokinase E3384_12265 IPR005945 Proline-specific peptidase E3384_12265 IPR000073 Alpha/beta hydrolase fold-1 E3384_12265 IPR002410 Peptidase S33 E3384_12265 IPR029058 Alpha/Beta hydrolase fold E3384_12270 IPR004841 Amino acid permease/ SLC12A domain E3384_12275 IPR015793 Pyruvate kinase, barrel E3384_12275 IPR040442 Pyruvate kinase-like domain superfamily E3384_12275 IPR015795 Pyruvate kinase, C-terminal E3384_12275 IPR001697 Pyruvate kinase E3384_12275 IPR015806 Pyruvate kinase, insert domain superfamily E3384_12275 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_12275 IPR018209 Pyruvate kinase, active site E3384_12275 IPR036918 Pyruvate kinase, C-terminal domain superfamily E3384_12275 IPR011037 Pyruvate kinase-like, insert domain superfamily E3384_12280 IPR006817 Lipoprotein leucine-zipper E3384_12280 IPR016367 Murein-lipoprotein E3384_12285 IPR016367 Murein-lipoprotein E3384_12285 IPR006817 Lipoprotein leucine-zipper E3384_12290 IPR016367 Murein-lipoprotein E3384_12290 IPR006817 Lipoprotein leucine-zipper E3384_12295 IPR038063 L,D-transpeptidase catalytic domain-like E3384_12295 IPR018392 LysM domain E3384_12295 IPR041597 L,D-transpeptidase C-terminal domain E3384_12295 IPR005490 L,D-transpeptidase catalytic domain E3384_12300 IPR003808 Fe-S metabolism associated domain, SufE-like E3384_12300 IPR023939 Cysteine desulfuration protein SufE E3384_12305 IPR000192 Aminotransferase class V domain E3384_12305 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site E3384_12305 IPR015424 Pyridoxal phosphate-dependent transferase E3384_12305 IPR010970 Cysteine desulfurase, SufS E3384_12305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_12305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_12310 IPR011542 SUF system FeS cluster assembly, SufD E3384_12310 IPR037284 SUF system FeS cluster assembly, SufBD superfamily E3384_12310 IPR000825 SUF system FeS cluster assembly, SufBD E3384_12315 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_12315 IPR010230 FeS cluster assembly SUF system, ATPase SufC E3384_12315 IPR017871 ABC transporter, conserved site E3384_12315 IPR003439 ABC transporter-like E3384_12315 IPR003593 AAA+ ATPase domain E3384_12320 IPR000825 SUF system FeS cluster assembly, SufBD E3384_12320 IPR037284 SUF system FeS cluster assembly, SufBD superfamily E3384_12320 IPR010231 SUF system FeS cluster assembly, SufB E3384_12325 IPR011298 FeS assembly scaffold SufA E3384_12325 IPR016092 FeS cluster insertion protein E3384_12325 IPR035903 HesB-like domain superfamily E3384_12325 IPR017870 FeS cluster insertion, C-terminal, conserved site E3384_12325 IPR000361 FeS cluster biogenesis E3384_12335 IPR031830 Uncharacterised protein YdiH E3384_12340 IPR003736 Phenylacetic acid degradation-related domain E3384_12340 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI E3384_12340 IPR029069 HotDog domain superfamily E3384_12340 IPR006683 Thioesterase domain E3384_12345 IPR036318 FAD-binding, type PCMH-like superfamily E3384_12345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_12345 IPR016164 FAD-linked oxidase-like, C-terminal E3384_12345 IPR004113 FAD-linked oxidase, C-terminal E3384_12345 IPR006094 FAD linked oxidase, N-terminal E3384_12345 IPR009051 Alpha-helical ferredoxin E3384_12345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_12345 IPR016166 FAD-binding domain, PCMH-type E3384_12350 IPR002549 Transmembrane protein TqsA-like E3384_12360 IPR015060 Protein of unknown function DUF1870 E3384_12360 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_12360 IPR027910 YdiL domain superfamily E3384_12365 IPR005829 Sugar transporter, conserved site E3384_12365 IPR011701 Major facilitator superfamily E3384_12365 IPR036259 MFS transporter superfamily E3384_12365 IPR020846 Major facilitator superfamily domain E3384_12370 IPR011701 Major facilitator superfamily E3384_12370 IPR020846 Major facilitator superfamily domain E3384_12370 IPR036259 MFS transporter superfamily E3384_12375 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal E3384_12375 IPR022893 Shikimate dehydrogenase family E3384_12375 IPR022872 Quinate/Shikimate dehydrogenase E3384_12375 IPR041121 SDH, C-terminal E3384_12375 IPR036291 NAD(P)-binding domain superfamily E3384_12380 IPR018508 3-dehydroquinate dehydratase, active site E3384_12380 IPR013785 Aldolase-type TIM barrel E3384_12380 IPR001381 3-dehydroquinate dehydratase type I E3384_12385 IPR037171 NagB/RpiA transferase-like E3384_12385 IPR014388 3-oxoacid CoA-transferase E3384_12385 IPR004165 Coenzyme A transferase family I E3384_12390 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily E3384_12390 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal E3384_12390 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal E3384_12390 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal E3384_12390 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain E3384_12390 IPR006089 Acyl-CoA dehydrogenase, conserved site E3384_12390 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily E3384_12395 IPR011051 RmlC-like cupin domain superfamily E3384_12395 IPR014710 RmlC-like jelly roll fold E3384_12395 IPR018060 DNA binding HTH domain, AraC-type E3384_12395 IPR009057 Homeobox-like domain superfamily E3384_12395 IPR003313 AraC-type arabinose-binding/dimerisation domain E3384_12400 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal E3384_12400 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site E3384_12400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_12400 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal E3384_12400 IPR012255 Electron transfer flavoprotein, beta subunit E3384_12405 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site E3384_12405 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal E3384_12405 IPR001308 Electron transfer flavoprotein alpha subunit/FixB E3384_12405 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal E3384_12405 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_12405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_12410 IPR002938 FAD-binding domain E3384_12410 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_12410 IPR039651 Protein FixC-like E3384_12415 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_12415 IPR012206 Ferredoxin-like, FixX E3384_12420 IPR025110 AMP-binding enzyme, C-terminal domain E3384_12420 IPR020845 AMP-binding, conserved site E3384_12420 IPR042099 AMP-dependent synthetase-like superfamily E3384_12420 IPR000873 AMP-dependent synthetase/ligase E3384_12425 IPR006319 Phosphoenolpyruvate synthase E3384_12425 IPR008279 PEP-utilising enzyme, mobile domain E3384_12425 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_12425 IPR000121 PEP-utilising enzyme, C-terminal E3384_12425 IPR023151 PEP-utilising enzyme, conserved site E3384_12425 IPR018274 PEP-utilising enzyme, active site E3384_12425 IPR040442 Pyruvate kinase-like domain superfamily E3384_12425 IPR013815 ATP-grasp fold, subdomain 1 E3384_12425 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding E3384_12425 IPR036637 Phosphohistidine domain superfamily E3384_12430 IPR005177 Bifunctional kinase-pyrophosphorylase E3384_12430 IPR026530 Phosphoenolpyruvate synthase regulatory protein E3384_12435 IPR013785 Aldolase-type TIM barrel E3384_12435 IPR006218 DAHP synthetase I/KDSA E3384_12435 IPR006219 DHAP synthase, class 1 E3384_12440 IPR019600 Hemin uptake protein HemP E3384_12445 IPR003846 Protein adenylyltransferase SelO E3384_12450 IPR001633 EAL domain E3384_12450 IPR035919 EAL domain superfamily E3384_12455 IPR000064 Endopeptidase, NLPC/P60 domain E3384_12455 IPR038765 Papain-like cysteine peptidase superfamily E3384_12460 IPR023693 ABC transporter, vitamin B12, BtuD E3384_12460 IPR003439 ABC transporter-like E3384_12460 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_12460 IPR003593 AAA+ ATPase domain E3384_12460 IPR017871 ABC transporter, conserved site E3384_12465 IPR036249 Thioredoxin-like superfamily E3384_12465 IPR033674 Thioredoxin/glutathione peroxidase BtuE E3384_12465 IPR000889 Glutathione peroxidase E3384_12465 IPR029760 Glutathione peroxidase conserved site E3384_12465 IPR029759 Glutathione peroxidase active site E3384_12470 IPR000522 ABC transporter, permease protein, BtuC-like E3384_12470 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC E3384_12470 IPR037294 ABC transporter, BtuC-like E3384_12475 IPR000119 Histone-like DNA-binding protein E3384_12475 IPR020816 Histone-like DNA-binding protein, conserved site E3384_12475 IPR005684 Integration host factor, alpha subunit E3384_12475 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily E3384_12480 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily E3384_12480 IPR005147 tRNA synthetase, B5-domain E3384_12480 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit E3384_12480 IPR002547 tRNA-binding domain E3384_12480 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain E3384_12480 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 E3384_12480 IPR009061 Putative DNA-binding domain superfamily E3384_12480 IPR005146 B3/B4 tRNA-binding domain E3384_12480 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain E3384_12480 IPR012340 Nucleic acid-binding, OB-fold E3384_12480 IPR005121 Ferrodoxin-fold anticodon-binding domain E3384_12485 IPR002319 Phenylalanyl-tRNA synthetase E3384_12485 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm E3384_12485 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial E3384_12485 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal E3384_12485 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit E3384_12485 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_12495 IPR035566 Ribosomal protein L20, C-terminal E3384_12495 IPR005813 Ribosomal protein L20 E3384_12500 IPR037229 Ribosomal protein L35 superfamily E3384_12500 IPR018265 Ribosomal protein L35, conserved site E3384_12500 IPR001706 Ribosomal protein L35, non-mitochondrial E3384_12500 IPR021137 Ribosomal protein L35 E3384_12505 IPR019814 Translation initiation factor 3, N-terminal E3384_12505 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily E3384_12505 IPR019813 Translation initiation factor 3, conserved site E3384_12505 IPR001288 Translation initiation factor 3 E3384_12505 IPR019815 Translation initiation factor 3, C-terminal E3384_12505 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily E3384_12510 IPR036621 Anticodon-binding domain superfamily E3384_12510 IPR004095 TGS E3384_12510 IPR004154 Anticodon-binding E3384_12510 IPR012676 TGS-like E3384_12510 IPR002320 Threonine-tRNA ligase, class IIa E3384_12510 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) E3384_12510 IPR012675 Beta-grasp domain superfamily E3384_12510 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily E3384_12510 IPR033728 Threonine-tRNA ligase catalytic core domain E3384_12510 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_12510 IPR012947 Threonyl/alanyl tRNA synthetase, SAD E3384_12515 IPR040255 Non-specific endonuclease E3384_12515 IPR018524 DNA/RNA non-specific endonuclease, active site E3384_12515 IPR001604 DNA/RNA non-specific endonuclease E3384_12515 IPR020821 Extracellular Endonuclease, subunit A E3384_12530 IPR007433 Protein of unknown function DUF481 E3384_12535 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_12535 IPR011611 Carbohydrate kinase PfkB E3384_12535 IPR017583 Tagatose/fructose phosphokinase E3384_12535 IPR029056 Ribokinase-like E3384_12540 IPR022597 Endoribonuclease antitoxin GhoS E3384_12540 IPR038241 Endoribonuclease antitoxin GhoS superfamily E3384_12550 IPR025229 YniB-like protein E3384_12555 IPR036412 HAD-like superfamily E3384_12555 IPR023198 Phosphoglycolate phosphatase-like, domain 2 E3384_12555 IPR041492 Haloacid dehalogenase-like hydrolase E3384_12555 IPR006439 HAD hydrolase, subfamily IA E3384_12555 IPR023214 HAD superfamily E3384_12560 IPR016956 Inner membrane protein YdjM E3384_12560 IPR007404 LexA-binding, inner membrane-associated putative hydrolase E3384_12570 IPR019666 Cell division activator CedA E3384_12570 IPR038463 CedA-like superfamily E3384_12575 IPR024712 Catalase, mono-functional, haem-containing, clade 2 E3384_12575 IPR020835 Catalase superfamily E3384_12575 IPR041399 Large catalase, C-terminal domain E3384_12575 IPR010582 Catalase immune-responsive domain E3384_12575 IPR024708 Catalase active site E3384_12575 IPR018028 Catalase, mono-functional, haem-containing E3384_12575 IPR037060 Catalase core domain superfamily E3384_12575 IPR011614 Catalase core domain E3384_12575 IPR029062 Class I glutamine amidotransferase-like E3384_12575 IPR002226 Catalase haem-binding site E3384_12580 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria E3384_12580 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel E3384_12580 IPR006879 Carbohydrate deacetylase YdjC-like E3384_12585 IPR019802 Glycoside hydrolase, family 4, conserved site E3384_12585 IPR036291 NAD(P)-binding domain superfamily E3384_12585 IPR001088 Glycoside hydrolase, family 4 E3384_12585 IPR022616 Glycosyl hydrolase, family 4, C-terminal E3384_12585 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal E3384_12590 IPR020449 Transcription regulator HTH, AraC- type E3384_12590 IPR011051 RmlC-like cupin domain superfamily E3384_12590 IPR014710 RmlC-like jelly roll fold E3384_12590 IPR018062 HTH domain AraC-type, conserved site E3384_12590 IPR013096 Cupin 2, conserved barrel E3384_12590 IPR009057 Homeobox-like domain superfamily E3384_12590 IPR018060 DNA binding HTH domain, AraC-type E3384_12595 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit E3384_12595 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily E3384_12600 IPR004501 Phosphotransferase system, EIIC component, type 3 E3384_12600 IPR004796 Phosphotransferase system, cellobiose-type IIC component E3384_12600 IPR003352 Phosphotransferase system, EIIC E3384_12605 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_12605 IPR013012 Phosphotransferase system, EIIB component, type 3 E3384_12605 IPR036095 PTS system IIB component-like superfamily E3384_12615 IPR007450 Lipoprotein SmpA/OmlA E3384_12615 IPR037873 BamE-like E3384_12620 IPR003694 NAD(+) synthetase E3384_12620 IPR022310 NAD/GMP synthase E3384_12620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_12620 IPR022926 NH(3)-dependent NAD(+) synthetase E3384_12625 IPR035901 GIY-YIG endonuclease superfamily E3384_12625 IPR000305 GIY-YIG endonuclease E3384_12630 IPR012899 LTXXQ motif family protein E3384_12635 IPR016681 Succinylglutamate desuccinylase E3384_12635 IPR007036 Succinylglutamate desuccinylase/aspartoacylase E3384_12640 IPR037031 Succinylarginine dihydrolase superfamily E3384_12640 IPR007079 Succinylarginine dihydrolase E3384_12645 IPR017649 Succinylglutamate-semialdehyde dehydrogenase E3384_12645 IPR015590 Aldehyde dehydrogenase domain E3384_12645 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_12645 IPR029510 Aldehyde dehydrogenase, glutamic acid active site E3384_12645 IPR016160 Aldehyde dehydrogenase, cysteine active site E3384_12645 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_12645 IPR016161 Aldehyde/histidinol dehydrogenase E3384_12650 IPR007041 Arginine N-succinyltransferase AstA/AruG E3384_12650 IPR016181 Acyl-CoA N-acyltransferase E3384_12650 IPR017650 Arginine N-succinyltransferase E3384_12655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_12655 IPR005814 Aminotransferase class-III E3384_12655 IPR026330 Succinylornithine transaminase E3384_12655 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria E3384_12655 IPR004636 Acetylornithine/Succinylornithine transaminase family E3384_12655 IPR015424 Pyridoxal phosphate-dependent transferase E3384_12655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_12660 IPR020847 AP endonuclease 1, binding site E3384_12660 IPR020848 AP endonuclease 1, conserved site E3384_12660 IPR004808 AP endonuclease 1 E3384_12660 IPR036691 Endonuclease/exonuclease/phosphatase superfamily E3384_12660 IPR037493 Exodeoxyribonuclease III-like E3384_12660 IPR005135 Endonuclease/exonuclease/phosphatase E3384_12665 IPR000086 NUDIX hydrolase domain E3384_12665 IPR020084 NUDIX hydrolase, conserved site E3384_12665 IPR015797 NUDIX hydrolase-like domain superfamily E3384_12665 IPR020476 NUDIX hydrolase E3384_12670 IPR009971 Protein of unknown function DUF1496 E3384_12675 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal E3384_12675 IPR033922 NAD(P) binding domain of glutamate dehydrogenase E3384_12675 IPR036291 NAD(P)-binding domain superfamily E3384_12675 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase E3384_12675 IPR033524 Leu/Phe/Val dehydrogenases active site E3384_12675 IPR014362 Glutamate dehydrogenase E3384_12675 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain E3384_12680 IPR023406 DNA topoisomerase, type IA, active site E3384_12680 IPR013497 DNA topoisomerase, type IA, central E3384_12680 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 E3384_12680 IPR003601 DNA topoisomerase, type IA, domain 2 E3384_12680 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 E3384_12680 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 E3384_12680 IPR023405 DNA topoisomerase, type IA, core domain E3384_12680 IPR003602 DNA topoisomerase, type IA, DNA-binding domain E3384_12680 IPR005738 DNA topoisomerase III E3384_12680 IPR034144 DNA topoisomerase 3-like, TOPRIM domain E3384_12680 IPR000380 DNA topoisomerase, type IA E3384_12680 IPR006171 TOPRIM domain E3384_12685 IPR023061 Selenophosphate synthetase, class I E3384_12685 IPR004536 Selenophosphate synthetase E3384_12685 IPR036921 PurM-like, N-terminal domain superfamily E3384_12685 IPR016188 PurM-like, N-terminal domain E3384_12685 IPR036676 PurM-like, C-terminal domain superfamily E3384_12685 IPR010918 PurM-like, C-terminal domain E3384_12690 IPR026021 Putative NAD(P)H nitroreductase YdjA-like E3384_12690 IPR000415 Nitroreductase-like E3384_12690 IPR029479 Nitroreductase E3384_12695 IPR029045 ClpP/crotonase-like domain superfamily E3384_12695 IPR002142 Peptidase S49 E3384_12695 IPR004635 Peptidase S49, SppA E3384_12695 IPR033854 Signal peptide peptidase A E3384_12695 IPR004634 Peptidase S49, protease IV E3384_12700 IPR020827 Asparaginase/glutaminase, active site 1 E3384_12700 IPR040919 Asparaginase/glutaminase, C-terminal E3384_12700 IPR037152 L-asparaginase, N-terminal domain superfamily E3384_12700 IPR027473 L-asparaginase, C-terminal E3384_12700 IPR027474 L-asparaginase, N-terminal E3384_12700 IPR041725 Type I (cytosolic) L-asparaginase E3384_12700 IPR006033 Type I L-asparaginase family E3384_12700 IPR027475 Asparaginase/glutaminase, active site 2 E3384_12700 IPR006034 Asparaginase/glutaminase-like E3384_12700 IPR036152 Asparaginase/glutaminase-like superfamily E3384_12705 IPR000868 Isochorismatase-like E3384_12705 IPR036380 Isochorismatase-like superfamily E3384_12710 IPR005828 Major facilitator, sugar transporter-like E3384_12710 IPR036259 MFS transporter superfamily E3384_12710 IPR020846 Major facilitator superfamily domain E3384_12715 IPR036390 Winged helix DNA-binding domain superfamily E3384_12715 IPR037171 NagB/RpiA transferase-like E3384_12715 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_12715 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_12715 IPR014036 DeoR C-terminal sensor domain E3384_12715 IPR001034 DeoR-type HTH domain E3384_12720 IPR020471 Aldo/keto reductase E3384_12720 IPR023210 NADP-dependent oxidoreductase domain E3384_12720 IPR036812 NADP-dependent oxidoreductase domain superfamily E3384_12725 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_12725 IPR002139 Ribokinase/fructokinase E3384_12725 IPR029056 Ribokinase-like E3384_12725 IPR011611 Carbohydrate kinase PfkB E3384_12730 IPR013785 Aldolase-type TIM barrel E3384_12730 IPR000771 Fructose-bisphosphate aldolase, class-II E3384_12735 IPR013149 Alcohol dehydrogenase, C-terminal E3384_12735 IPR011032 GroES-like superfamily E3384_12735 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E3384_12735 IPR013154 Alcohol dehydrogenase, N-terminal E3384_12735 IPR036291 NAD(P)-binding domain superfamily E3384_12735 IPR020843 Polyketide synthase, enoylreductase domain E3384_12740 IPR005828 Major facilitator, sugar transporter-like E3384_12740 IPR020846 Major facilitator superfamily domain E3384_12740 IPR036259 MFS transporter superfamily E3384_12745 IPR013149 Alcohol dehydrogenase, C-terminal E3384_12745 IPR036291 NAD(P)-binding domain superfamily E3384_12745 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E3384_12745 IPR011032 GroES-like superfamily E3384_12745 IPR013154 Alcohol dehydrogenase, N-terminal E3384_12750 IPR009749 Protein of unknown function DUF1315 E3384_12755 IPR002579 Peptide methionine sulphoxide reductase MrsB E3384_12755 IPR011057 Mss4-like superfamily E3384_12755 IPR028427 Peptide methionine sulfoxide reductase E3384_12760 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family E3384_12760 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain E3384_12760 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site E3384_12760 IPR036291 NAD(P)-binding domain superfamily E3384_12760 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain E3384_12760 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I E3384_12765 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase E3384_12765 IPR025532 Glucose-6-phosphate 1-epimerase E3384_12765 IPR011013 Galactose mutarotase-like domain superfamily E3384_12765 IPR014718 Glycoside hydrolase-type carbohydrate-binding E3384_12770 IPR036812 NADP-dependent oxidoreductase domain superfamily E3384_12770 IPR023210 NADP-dependent oxidoreductase domain E3384_12770 IPR020471 Aldo/keto reductase E3384_12775 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme E3384_12775 IPR013785 Aldolase-type TIM barrel E3384_12775 IPR023885 4Fe4S-binding SPASM domain E3384_12775 IPR007197 Radical SAM E3384_12780 IPR010583 MltA-interacting MipA E3384_12785 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_12785 IPR016230 Serine-protein kinase, PrkA E3384_12785 IPR010650 PrkA C-terminal domain E3384_12785 IPR013153 PrkA AAA domain E3384_12790 IPR006698 Uncharacterised protein family UPF0229 E3384_12800 IPR000160 GGDEF domain E3384_12800 IPR029787 Nucleotide cyclase E3384_12800 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 E3384_12805 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain E3384_12805 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily E3384_12815 IPR007382 Uncharacterised protein family UPF0756, transmembrame E3384_12820 IPR011051 RmlC-like cupin domain superfamily E3384_12820 IPR014710 RmlC-like jelly roll fold E3384_12820 IPR009057 Homeobox-like domain superfamily E3384_12820 IPR018062 HTH domain AraC-type, conserved site E3384_12820 IPR003313 AraC-type arabinose-binding/dimerisation domain E3384_12820 IPR018060 DNA binding HTH domain, AraC-type E3384_12825 IPR004747 Cyanate transport system protein E3384_12825 IPR011701 Major facilitator superfamily E3384_12825 IPR020846 Major facilitator superfamily domain E3384_12825 IPR036259 MFS transporter superfamily E3384_12830 IPR007438 Protein of unknown function DUF488 E3384_12840 IPR005590 Protein of unknown function DUF333 E3384_12850 IPR007341 Transglycosylase-associated protein E3384_12865 IPR036489 YoaG superfamily E3384_12865 IPR015051 Protein YoaG E3384_12870 IPR014710 RmlC-like jelly roll fold E3384_12870 IPR015392 Domain of unknown function DUF1971 E3384_12870 IPR014510 Tellurite resistance predicted, YeaR E3384_12875 IPR001123 Amino acid exporter protein, LeuE-type E3384_12880 IPR008240 Chorismate mutase, periplasmic E3384_12880 IPR036263 Chorismate mutase type II superfamily E3384_12880 IPR002701 Chorismate mutase II, prokaryotic-type E3384_12895 IPR011789 Cu(I)-responsive transcriptional regulator E3384_12895 IPR009061 Putative DNA-binding domain superfamily E3384_12895 IPR000551 MerR-type HTH domain E3384_12895 IPR015358 Transcription regulator MerR, DNA binding E3384_12905 IPR024172 Streptomycin 3''-adenylyltransferase E3384_12905 IPR025184 Domain of unknown function DUF4111 E3384_12905 IPR002934 Polymerase, nucleotidyl transferase domain E3384_12910 IPR012674 Calycin E3384_12910 IPR015304 ZinT domain E3384_12925 IPR010920 LSM domain superfamily E3384_12925 IPR006685 Mechanosensitive ion channel MscS E3384_12925 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 E3384_12925 IPR006686 Mechanosensitive ion channel MscS, conserved site E3384_12925 IPR011066 Mechanosensitive ion channel MscS, C-terminal E3384_12925 IPR023408 Mechanosensitive ion channel MscS domain superfamily E3384_12930 IPR003439 ABC transporter-like E3384_12930 IPR003593 AAA+ ATPase domain E3384_12930 IPR015858 ABC transporter, nickel import, NikE E3384_12930 IPR014137 Nickel import ATP-binding protein NikE E3384_12930 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_12930 IPR017871 ABC transporter, conserved site E3384_12935 IPR014138 Nickel import ATP-binding protein NikD E3384_12935 IPR015857 ABC transporter, nickel import, NikD E3384_12935 IPR017871 ABC transporter, conserved site E3384_12935 IPR003593 AAA+ ATPase domain E3384_12935 IPR003439 ABC transporter-like E3384_12935 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_12940 IPR035906 MetI-like superfamily E3384_12940 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_12940 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E3384_12945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_12945 IPR035906 MetI-like superfamily E3384_12950 IPR023765 Solute-binding protein family 5, conserved site E3384_12950 IPR039424 Solute-binding protein family 5 E3384_12950 IPR030678 Peptide/nickel binding protein, MppA-type E3384_12950 IPR000914 Solute-binding protein family 5 domain E3384_12960 IPR016174 Di-haem cytochrome, transmembrane E3384_12960 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase E3384_12975 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain E3384_12975 IPR008978 HSP20-like chaperone E3384_12975 IPR002068 Alpha crystallin/Hsp20 domain E3384_13000 IPR000758 Virulence-related outer membrane protein E3384_13000 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel E3384_13015 IPR012340 Nucleic acid-binding, OB-fold E3384_13015 IPR019844 Cold-shock (CSD) domain E3384_13015 IPR011129 Cold shock domain E3384_13015 IPR002059 Cold-shock protein, DNA-binding E3384_13015 IPR012156 Cold shock, CspA E3384_13020 IPR035992 Ricin B-like lectins E3384_13020 IPR000772 Ricin B, lectin domain E3384_13025 IPR036687 DinI-like superfamily E3384_13025 IPR010391 DNA damage-inducible protein DinI-like E3384_13045 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic E3384_13045 IPR024084 Isopropylmalate dehydrogenase-like domain E3384_13045 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site E3384_13050 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F E3384_13050 IPR006145 Pseudouridine synthase, RsuA/RluA E3384_13050 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_13050 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain E3384_13050 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site E3384_13060 IPR033713 Phosphatase NudJ E3384_13060 IPR000086 NUDIX hydrolase domain E3384_13060 IPR020084 NUDIX hydrolase, conserved site E3384_13060 IPR015797 NUDIX hydrolase-like domain superfamily E3384_13060 IPR020476 NUDIX hydrolase E3384_13065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_13065 IPR023382 Adenine nucleotide alpha hydrolase-like domains E3384_13065 IPR004506 tRNA-specific 2-thiouridylase E3384_13070 IPR007451 High frequency lysogenization protein HflD E3384_13070 IPR035932 HflD-like superfamily E3384_13075 IPR013539 Adenylosuccinate lyase PurB, C-terminal E3384_13075 IPR004769 Adenylosuccinate lyase E3384_13075 IPR008948 L-Aspartase-like E3384_13075 IPR000362 Fumarate lyase family E3384_13075 IPR020557 Fumarate lyase, conserved site E3384_13075 IPR022761 Fumarate lyase, N-terminal E3384_13075 IPR024083 Fumarase/histidase, N-terminal E3384_13080 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_13080 IPR001789 Signal transduction response regulator, receiver domain E3384_13080 IPR011006 CheY-like superfamily E3384_13080 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_13080 IPR039420 Transcriptional regulatory protein WalR-like E3384_13085 IPR015014 PhoQ Sensor E3384_13085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_13085 IPR038429 PhoQ Sensor superfamily E3384_13085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_13085 IPR003594 Histidine kinase/HSP90-like ATPase E3384_13085 IPR003660 HAMP domain E3384_13085 IPR005467 Histidine kinase domain E3384_13085 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_13090 IPR003347 JmjC domain E3384_13090 IPR039994 JmjC domain-containing E3384_13100 IPR002933 Peptidase M20 E3384_13100 IPR036264 Bacterial exopeptidase dimerisation domain E3384_13100 IPR010161 Peptidase M20B, tripeptide aminopeptidase E3384_13100 IPR011650 Peptidase M20, dimerisation domain E3384_13100 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site E3384_13105 IPR003593 AAA+ ATPase domain E3384_13105 IPR003439 ABC transporter-like E3384_13105 IPR017871 ABC transporter, conserved site E3384_13105 IPR008995 Molybdate/tungstate binding, C-terminal E3384_13105 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_13105 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit E3384_13105 IPR013611 Transport-associated OB, type 2 E3384_13105 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA E3384_13110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_13110 IPR035906 MetI-like superfamily E3384_13115 IPR010637 Sif E3384_13120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_13120 IPR035906 MetI-like superfamily E3384_13125 IPR006059 Bacterial extracellular solute-binding protein E3384_13125 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein E3384_13130 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_13130 IPR027546 Sirtuin, class III E3384_13130 IPR026591 Sirtuin, catalytic core small domain superfamily E3384_13130 IPR003000 Sirtuin family E3384_13130 IPR026590 Sirtuin family, catalytic core domain E3384_13135 IPR000600 ROK family E3384_13135 IPR023505 N-acetyl-D-glucosamine kinase E3384_13140 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E E3384_13140 IPR025857 MacB-like periplasmic core domain E3384_13140 IPR003838 ABC transporter permease protein domain E3384_13140 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type E3384_13145 IPR011924 Lipoprotein releasing system, ATP-binding protein E3384_13145 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_13145 IPR015854 ABC transporter, lipoprotein release, LolD E3384_13145 IPR017871 ABC transporter, conserved site E3384_13145 IPR003593 AAA+ ATPase domain E3384_13145 IPR003439 ABC transporter-like E3384_13150 IPR025857 MacB-like periplasmic core domain E3384_13150 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E E3384_13150 IPR003838 ABC transporter permease protein domain E3384_13155 IPR005118 Transcription-repair-coupling factor, C-terminal domain E3384_13155 IPR037235 TRCF-like, C-terminal domain E3384_13155 IPR036101 CarD-like/TRCF domain superfamily E3384_13155 IPR004576 Transcription-repair coupling factor E3384_13155 IPR001650 Helicase, C-terminal E3384_13155 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_13155 IPR011545 DEAD/DEAH box helicase domain E3384_13155 IPR041471 UvrB, interaction domain E3384_13155 IPR003711 CarD-like/TRCF domain E3384_13155 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_13160 IPR018392 LysM domain E3384_13160 IPR038063 L,D-transpeptidase catalytic domain-like E3384_13160 IPR005490 L,D-transpeptidase catalytic domain E3384_13160 IPR041597 L,D-transpeptidase C-terminal domain E3384_13165 IPR010854 Domain of unknown function DUF1471 E3384_13165 IPR025543 Dodecin-like E3384_13165 IPR036275 YdgH-like superfamily E3384_13170 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_13170 IPR009057 Homeobox-like domain superfamily E3384_13170 IPR001647 DNA-binding HTH domain, TetR-type E3384_13175 IPR008816 Glycine zipper 2TM domain E3384_13180 IPR023753 FAD/NAD(P)-binding domain E3384_13180 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_13185 IPR022987 Uncharacterised protein family UPF0227 E3384_13185 IPR029058 Alpha/Beta hydrolase fold E3384_13185 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA E3384_13190 IPR001764 Glycoside hydrolase, family 3, N-terminal E3384_13190 IPR017853 Glycoside hydrolase superfamily E3384_13190 IPR019800 Glycoside hydrolase, family 3, active site E3384_13190 IPR022956 Beta-hexosaminidase, bacterial E3384_13190 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily E3384_13195 IPR002575 Aminoglycoside phosphotransferase E3384_13195 IPR014093 Thiamine kinase E3384_13195 IPR011009 Protein kinase-like domain superfamily E3384_13200 IPR014094 Penicillin-binding protein activator LpoB E3384_13205 IPR038483 YcfL-like superfamily E3384_13205 IPR010824 Protein of unknown function DUF1425 E3384_13210 IPR011146 HIT-like domain E3384_13210 IPR019808 Histidine triad, conserved site E3384_13210 IPR001310 Histidine triad (HIT) protein E3384_13210 IPR036265 HIT-like superfamily E3384_13215 IPR010105 TonB-dependent siderophore receptor E3384_13215 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily E3384_13215 IPR010917 TonB-dependent receptor, conserved site E3384_13215 IPR010916 TonB box, conserved site E3384_13215 IPR037066 TonB-dependent receptor, plug domain superfamily E3384_13215 IPR000531 TonB-dependent receptor-like, beta-barrel E3384_13215 IPR039423 TonB-dependent receptor-like E3384_13215 IPR012910 TonB-dependent receptor, plug domain E3384_13220 IPR011299 PTS system glucose-specific IIBC component E3384_13220 IPR001996 Phosphotransferase system, IIB component, type 1 E3384_13220 IPR036878 Glucose permease domain IIB E3384_13220 IPR013013 Phosphotransferase system, EIIC component, type 1 E3384_13220 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site E3384_13220 IPR003352 Phosphotransferase system, EIIC E3384_13220 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component E3384_13225 IPR015991 Uncharacterised hydrolase TatD-type E3384_13225 IPR032466 Metal-dependent hydrolase E3384_13225 IPR018228 Deoxyribonuclease, TatD-related, conserved site E3384_13225 IPR001130 TatD family E3384_13230 IPR015199 DNA polymerase III, delta subunit, C-terminal E3384_13230 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal E3384_13230 IPR004622 DNA polymerase III, delta prime subunit E3384_13230 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_13235 IPR039430 Thymidylate kinase-like domain E3384_13235 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_13235 IPR018095 Thymidylate kinase, conserved site E3384_13235 IPR018094 Thymidylate kinase E3384_13240 IPR003770 Endolytic murein transglycosylase E3384_13245 IPR017824 Aminodeoxychorismate lyase, class IV E3384_13245 IPR018300 Aminotransferase, class IV, conserved site E3384_13245 IPR036038 Aminotransferase-like, PLP-dependent enzymes E3384_13245 IPR001544 Aminotransferase class IV E3384_13250 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 E3384_13250 IPR000794 Beta-ketoacyl synthase E3384_13250 IPR018201 Beta-ketoacyl synthase, active site E3384_13250 IPR014031 Beta-ketoacyl synthase, C-terminal E3384_13250 IPR014030 Beta-ketoacyl synthase, N-terminal E3384_13250 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain E3384_13250 IPR016039 Thiolase-like E3384_13255 IPR036736 ACP-like superfamily E3384_13255 IPR003231 Acyl carrier protein (ACP) E3384_13255 IPR009081 Phosphopantetheine binding ACP domain E3384_13255 IPR006162 Phosphopantetheine attachment site E3384_13260 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_13260 IPR036291 NAD(P)-binding domain superfamily E3384_13260 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase E3384_13260 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_13265 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding E3384_13265 IPR024925 Malonyl CoA-acyl carrier protein transacylase E3384_13265 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase E3384_13265 IPR014043 Acyl transferase E3384_13265 IPR001227 Acyl transferase domain superfamily E3384_13265 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type E3384_13270 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal E3384_13270 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E3384_13270 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 E3384_13270 IPR016039 Thiolase-like E3384_13275 IPR012281 Phospholipid biosynthesis protein, PlsX-like E3384_13275 IPR003664 Fatty acid synthesis PlsX protein E3384_13280 IPR011332 Zinc-binding ribosomal protein E3384_13280 IPR002677 Ribosomal protein L32p E3384_13285 IPR003772 Large ribosomal RNA subunit accumulation protein YceD E3384_13285 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria E3384_13290 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein E3384_13290 IPR029001 Inosine triphosphate pyrophosphatase-like E3384_13305 IPR006145 Pseudouridine synthase, RsuA/RluA E3384_13305 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site E3384_13305 IPR036986 RNA-binding S4 domain superfamily E3384_13305 IPR006225 Pseudouridine synthase, RluC/RluD E3384_13305 IPR002942 RNA-binding S4 domain E3384_13305 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_13315 IPR003029 S1 domain E3384_13315 IPR028878 Ribonuclease E E3384_13315 IPR021968 Polyribonucleotide phosphorylase C-terminal E3384_13315 IPR004659 Ribonuclease E/G E3384_13315 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G E3384_13315 IPR012340 Nucleic acid-binding, OB-fold E3384_13315 IPR022967 RNA-binding domain, S1 E3384_13320 IPR013384 Flagellar hook-associated protein 3 E3384_13320 IPR001029 Flagellin, D0/D1 domain E3384_13325 IPR010930 Flagellar basal-body/hook protein, C-terminal domain E3384_13325 IPR002371 Flagellar hook-associated protein 1 E3384_13325 IPR019776 Flagellar basal body rod protein, conserved site E3384_13325 IPR001444 Flagellar basal body rod protein, N-terminal E3384_13330 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain E3384_13330 IPR013377 Peptidoglycan hydrolase FlgJ E3384_13330 IPR019301 Flagellar protein FlgJ, N-terminal E3384_13335 IPR001782 Flagellar P-ring protein E3384_13340 IPR000527 Flagellar L-ring protein E3384_13345 IPR010930 Flagellar basal-body/hook protein, C-terminal domain E3384_13345 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like E3384_13345 IPR012834 Flagellar basal-body rod FlgG E3384_13345 IPR020013 Flagellar hook-basal body protein, FlgE/F/G E3384_13345 IPR001444 Flagellar basal body rod protein, N-terminal E3384_13345 IPR019776 Flagellar basal body rod protein, conserved site E3384_13350 IPR001444 Flagellar basal body rod protein, N-terminal E3384_13350 IPR020013 Flagellar hook-basal body protein, FlgE/F/G E3384_13350 IPR019776 Flagellar basal body rod protein, conserved site E3384_13350 IPR010930 Flagellar basal-body/hook protein, C-terminal domain E3384_13350 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like E3384_13355 IPR020013 Flagellar hook-basal body protein, FlgE/F/G E3384_13355 IPR037058 Flagellar hook protein FlgE superfamily E3384_13355 IPR011491 Flagellar hook protein FlgE E3384_13355 IPR001444 Flagellar basal body rod protein, N-terminal E3384_13355 IPR019776 Flagellar basal body rod protein, conserved site E3384_13355 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like E3384_13355 IPR010930 Flagellar basal-body/hook protein, C-terminal domain E3384_13360 IPR025963 FlgD Tudor-like domain E3384_13360 IPR005648 Flagellar hook capping protein E3384_13360 IPR025965 FlgD Ig-like domain E3384_13365 IPR019776 Flagellar basal body rod protein, conserved site E3384_13365 IPR006299 Flagellar basal-body rod protein FlgC E3384_13365 IPR010930 Flagellar basal-body/hook protein, C-terminal domain E3384_13365 IPR001444 Flagellar basal body rod protein, N-terminal E3384_13370 IPR001444 Flagellar basal body rod protein, N-terminal E3384_13370 IPR019776 Flagellar basal body rod protein, conserved site E3384_13370 IPR006300 Flagellar basal-body rod protein FlgB E3384_13375 IPR039246 Flagellar protein FlgA E3384_13375 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal E3384_13375 IPR013974 SAF domain E3384_13380 IPR007412 Anti-sigma-28 factor, FlgM E3384_13380 IPR035890 Anti-sigma-28 factor FlgM superfamily E3384_13380 IPR031316 Anti-sigma-28 factor FlgM, C-terminal E3384_13385 IPR007809 FlgN-like protein E3384_13385 IPR036679 FlgN-like superfamily E3384_13390 IPR004268 Peptidoglycan biosynthesis protein MurJ E3384_13395 IPR000683 Oxidoreductase, N-terminal E3384_13395 IPR036291 NAD(P)-binding domain superfamily E3384_13400 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_13400 IPR007432 Protein of unknown function DUF480 E3384_13400 IPR036390 Winged helix DNA-binding domain superfamily E3384_13405 IPR000182 GNAT domain E3384_13405 IPR016181 Acyl-CoA N-acyltransferase E3384_13410 IPR022855 Multidrug resistance protein MdtH E3384_13410 IPR036259 MFS transporter superfamily E3384_13410 IPR020846 Major facilitator superfamily domain E3384_13410 IPR011701 Major facilitator superfamily E3384_13415 IPR007494 Glutaredoxin 2, C-terminal E3384_13415 IPR011901 Glutaredoxin-2 E3384_13415 IPR011767 Glutaredoxin active site E3384_13415 IPR036249 Thioredoxin-like superfamily E3384_13415 IPR036282 Glutathione S-transferase, C-terminal domain superfamily E3384_13415 IPR004045 Glutathione S-transferase, N-terminal E3384_13420 IPR010835 Protein of unknown function DUF1439 E3384_13425 IPR004721 Dihydroorotase homodimeric type E3384_13425 IPR002195 Dihydroorotase, conserved site E3384_13425 IPR032466 Metal-dependent hydrolase E3384_13425 IPR006680 Amidohydrolase-related E3384_13430 IPR036687 DinI-like superfamily E3384_13430 IPR010391 DNA damage-inducible protein DinI-like E3384_13435 IPR025730 Biofilm regulator BssS E3384_13440 IPR023493 N-methyl-L-tryptophan oxidase MTOX E3384_13440 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_13440 IPR006076 FAD dependent oxidoreductase E3384_13445 IPR024494 Protein of unknown function DUF2770 E3384_13450 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase E3384_13450 IPR016174 Di-haem cytochrome, transmembrane E3384_13455 IPR007372 Lipid/polyisoprenoid-binding, YceI-like E3384_13455 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily E3384_13455 IPR023480 Uncharacterised protein family UPF0312/YceI E3384_13465 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase E3384_13465 IPR004960 Bacterial lipid A biosynthesis acyltransferase E3384_13470 IPR020846 Major facilitator superfamily domain E3384_13470 IPR036259 MFS transporter superfamily E3384_13470 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG E3384_13470 IPR023692 Multidrug resistance protein MdtG E3384_13470 IPR011701 Major facilitator superfamily E3384_13475 IPR025729 MsyB protein E3384_13480 IPR010780 Protein of unknown function DUF1375 E3384_13485 IPR029044 Nucleotide-diphospho-sugar transferases E3384_13485 IPR001173 Glycosyltransferase 2-like E3384_13485 IPR023725 Glucan biosynthesis glucosyltransferase H E3384_13490 IPR014438 Glucan biosynthesis protein MdoG/MdoD E3384_13490 IPR014718 Glycoside hydrolase-type carbohydrate-binding E3384_13490 IPR011013 Galactose mutarotase-like domain superfamily E3384_13490 IPR023704 Glucan biosynthesis protein G E3384_13490 IPR014756 Immunoglobulin E-set E3384_13490 IPR013783 Immunoglobulin-like fold E3384_13490 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal E3384_13500 IPR002656 Acyltransferase 3 E3384_13500 IPR023723 Glucan biosynthesis protein C E3384_13505 IPR030871 Cardiolipin synthase C E3384_13505 IPR001736 Phospholipase D/Transphosphatidylase E3384_13505 IPR025202 Phospholipase D-like domain E3384_13510 IPR024900 O-acetyl-ADP-ribose deacetylase E3384_13510 IPR002589 Macro domain E3384_13520 IPR014491 Curli production protein CsgC E3384_13525 IPR009742 Curlin associated E3384_13530 IPR009742 Curlin associated E3384_13535 IPR016032 Signal transduction response regulator, C-terminal effector E3384_13535 IPR000792 Transcription regulator LuxR, C-terminal E3384_13535 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_13540 IPR018900 Curli assembly protein CsgE E3384_13545 IPR018893 Type VIII secretion system, CsgF E3384_13550 IPR005534 Curli production assembly/transport component CsgG E3384_13555 IPR009476 Protein of unknown function DUF1097 E3384_13560 IPR036411 TorD-like superfamily E3384_13560 IPR026269 Tat proofreading chaperone DmsD-type E3384_13560 IPR020945 DMSO/Nitrate reductase chaperone E3384_13565 IPR023710 Probable phosphatase YcdX E3384_13565 IPR016195 Polymerase/histidinol phosphatase-like E3384_13565 IPR004013 PHP domain E3384_13565 IPR003141 Polymerase/histidinol phosphatase, N-terminal E3384_13570 IPR023514 Glyoxylate/hydroxypyruvate reductase A E3384_13570 IPR036291 NAD(P)-binding domain superfamily E3384_13570 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain E3384_13585 IPR004104 Oxidoreductase, C-terminal E3384_13585 IPR036291 NAD(P)-binding domain superfamily E3384_13585 IPR000683 Oxidoreductase, N-terminal E3384_13590 IPR020846 Major facilitator superfamily domain E3384_13590 IPR036259 MFS transporter superfamily E3384_13590 IPR011701 Major facilitator superfamily E3384_13595 IPR009331 Oligogalacturonate-specific porin E3384_13600 IPR019936 Mutatrotase, YjhT-like E3384_13600 IPR006652 Kelch repeat type 1 E3384_13600 IPR015915 Kelch-type beta propeller E3384_13605 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase E3384_13605 IPR013785 Aldolase-type TIM barrel E3384_13605 IPR011060 Ribulose-phosphate binding barrel E3384_13610 IPR001734 Sodium/solute symporter E3384_13610 IPR038377 Sodium/glucose symporter superfamily E3384_13615 IPR009057 Homeobox-like domain superfamily E3384_13615 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_13615 IPR001347 Sugar isomerase (SIS) E3384_13615 IPR000281 Helix-turn-helix protein RpiR E3384_13615 IPR035472 RpiR-like, SIS domain E3384_13620 IPR003714 PhoH-like protein E3384_13620 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_13625 IPR018212 Sodium/solute symporter, conserved site E3384_13625 IPR001734 Sodium/solute symporter E3384_13625 IPR011851 Sodium/proline symporter E3384_13625 IPR038377 Sodium/glucose symporter superfamily E3384_13630 IPR024082 Proline dehydrogenase PutA, domain II E3384_13630 IPR010985 Ribbon-helix-helix E3384_13630 IPR024089 Proline dehydrogenase PutA, domain I/II E3384_13630 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 E3384_13630 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain E3384_13630 IPR002872 Proline dehydrogenase domain E3384_13630 IPR029041 FAD-linked oxidoreductase-like E3384_13630 IPR024090 Proline dehydrogenase PutA, domain I E3384_13630 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_13630 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_13630 IPR016161 Aldehyde/histidinol dehydrogenase E3384_13630 IPR013321 Arc-type ribbon-helix-helix E3384_13630 IPR015590 Aldehyde dehydrogenase domain E3384_13630 IPR016160 Aldehyde dehydrogenase, cysteine active site E3384_13630 IPR025703 Bifunctional protein PutA E3384_13630 IPR029510 Aldehyde dehydrogenase, glutamic acid active site E3384_13640 IPR009057 Homeobox-like domain superfamily E3384_13640 IPR001647 DNA-binding HTH domain, TetR-type E3384_13640 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_13640 IPR019915 Transcription regulator, pyrimidine utilisation, RutR E3384_13640 IPR013573 Transcription regulator YcdC, C-terminal E3384_13645 IPR019626 Stress-induced protein, KGG, repeat E3384_13650 IPR010089 Flavoprotein WrbA-like E3384_13650 IPR005025 NADPH-dependent FMN reductase-like E3384_13650 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic E3384_13650 IPR008254 Flavodoxin/nitric oxide synthase E3384_13650 IPR029039 Flavoprotein-like superfamily E3384_13655 IPR025600 YccJ-like protein E3384_13660 IPR029033 Histidine phosphatase superfamily E3384_13660 IPR033379 Histidine acid phosphatase active site E3384_13660 IPR000560 Histidine phosphatase superfamily, clade-2 E3384_13665 IPR036249 Thioredoxin-like superfamily E3384_13665 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant E3384_13665 IPR013766 Thioredoxin domain E3384_13665 IPR017937 Thioredoxin, conserved site E3384_13670 IPR004670 Na+/H+ antiporter NhaA E3384_13670 IPR012336 Thioredoxin-like fold E3384_13670 IPR023171 Na/H antiporter domain superfamily E3384_13670 IPR013766 Thioredoxin domain E3384_13670 IPR036249 Thioredoxin-like superfamily E3384_13675 IPR003834 Cytochrome C biogenesis protein, transmembrane domain E3384_13675 IPR035671 DsbD gamma E3384_13675 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain E3384_13675 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily E3384_13675 IPR022910 Thiol:disulphide interchange protein DsbD E3384_13675 IPR036249 Thioredoxin-like superfamily E3384_13675 IPR012336 Thioredoxin-like fold E3384_13675 IPR017937 Thioredoxin, conserved site E3384_13675 IPR013766 Thioredoxin domain E3384_13685 IPR002939 Chaperone DnaJ, C-terminal E3384_13685 IPR001623 DnaJ domain E3384_13685 IPR018253 DnaJ domain, conserved site E3384_13685 IPR008971 HSP40/DnaJ peptide-binding E3384_13685 IPR023859 DNA-binding protein, curved-DNA E3384_13685 IPR036869 Chaperone J-domain superfamily E3384_13690 IPR022835 Chaperone modulatory protein CbpM E3384_13700 IPR014448 Anti-adapter protein IraM E3384_13705 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E3384_13705 IPR001279 Metallo-beta-lactamase E3384_13705 IPR013471 Ribonuclease Z/BN E3384_13715 IPR011701 Major facilitator superfamily E3384_13715 IPR036259 MFS transporter superfamily E3384_13715 IPR020846 Major facilitator superfamily domain E3384_13720 IPR040442 Pyruvate kinase-like domain superfamily E3384_13720 IPR005000 HpcH/HpaI aldolase/citrate lyase domain E3384_13720 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase E3384_13720 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales E3384_13720 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_13725 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily E3384_13725 IPR011234 Fumarylacetoacetase-like, C-terminal E3384_13725 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase E3384_13730 IPR014347 Tautomerase/MIF superfamily E3384_13730 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase E3384_13735 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B E3384_13735 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase E3384_13740 IPR016160 Aldehyde dehydrogenase, cysteine active site E3384_13740 IPR029510 Aldehyde dehydrogenase, glutamic acid active site E3384_13740 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_13740 IPR016161 Aldehyde/histidinol dehydrogenase E3384_13740 IPR015590 Aldehyde dehydrogenase domain E3384_13740 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase E3384_13740 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_13745 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily E3384_13745 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit E3384_13745 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit E3384_13745 IPR011234 Fumarylacetoacetase-like, C-terminal E3384_13750 IPR012712 HTH-type transcriptional regulator HpaR/FarR E3384_13750 IPR023187 Transcriptional regulator MarR-type, conserved site E3384_13750 IPR000835 MarR-type HTH domain E3384_13750 IPR036390 Winged helix DNA-binding domain superfamily E3384_13750 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_13755 IPR024674 HpaB/PvcC/4-BUDH N-terminal E3384_13755 IPR024719 HpaB/PvcC/4-BUDH C-terminal E3384_13755 IPR004925 HpaB/PvcC/4-BUDH E3384_13755 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein E3384_13755 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily E3384_13755 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal E3384_13755 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria E3384_13760 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component E3384_13760 IPR012349 FMN-binding split barrel E3384_13760 IPR002563 Flavin reductase like domain E3384_13765 IPR014306 Hydroxyisourate hydrolase E3384_13765 IPR023418 Transthyretin, thyroxine binding site E3384_13765 IPR000895 Transthyretin/hydroxyisourate hydrolase E3384_13765 IPR023416 Transthyretin/hydroxyisourate hydrolase domain E3384_13765 IPR023419 Transthyretin, conserved site E3384_13765 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily E3384_13770 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_13770 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_13770 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response E3384_13770 IPR001789 Signal transduction response regulator, receiver domain E3384_13770 IPR016032 Signal transduction response regulator, C-terminal effector E3384_13770 IPR011006 CheY-like superfamily E3384_13770 IPR039420 Transcriptional regulatory protein WalR-like E3384_13775 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_13775 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_13775 IPR006290 Heavy metal sensor kinase E3384_13775 IPR003660 HAMP domain E3384_13775 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_13775 IPR003594 Histidine kinase/HSP90-like ATPase E3384_13775 IPR005467 Histidine kinase domain E3384_13775 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_13780 IPR005322 Peptidase C69, dipeptidase A E3384_13790 IPR025030 Domain of unknown function DUF3950 E3384_13795 IPR008108 Phosphatase IpgD/SopB E3384_13800 IPR013095 Type III secretion system chaperone E3384_13810 IPR001646 Pentapeptide repeat E3384_13825 IPR006214 Bax inhibitor 1-related E3384_13825 IPR006213 Bax inhibitor 1, conserved site E3384_13830 IPR025526 DsrC-like domain superfamily E3384_13830 IPR007453 Sulphur transfer protein DsrC/TusE E3384_13830 IPR042072 DsrC-like protein, C-terminal domain E3384_13835 IPR028627 Acylphosphatase, bacteria E3384_13835 IPR036046 Acylphosphatase-like domain superfamily E3384_13835 IPR017968 Acylphosphatase, conserved site E3384_13835 IPR001792 Acylphosphatase-like domain E3384_13835 IPR020456 Acylphosphatase E3384_13840 IPR018060 DNA binding HTH domain, AraC-type E3384_13840 IPR020449 Transcription regulator HTH, AraC- type E3384_13840 IPR018062 HTH domain AraC-type, conserved site E3384_13840 IPR009057 Homeobox-like domain superfamily E3384_13845 IPR005247 YbhB/YbcL E3384_13845 IPR036610 PEBP-like superfamily E3384_13845 IPR008914 Phosphatidylethanolamine-binding protein E3384_13850 IPR023542 rRNA large subunit methyltransferase I E3384_13850 IPR041532 RlmI, PUA-like domain E3384_13850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_13850 IPR036974 PUA domain superfamily E3384_13850 IPR015947 PUA-like superfamily E3384_13850 IPR002478 PUA domain E3384_13850 IPR019614 S-adenosylmethionine-dependent methyltransferase E3384_13855 IPR011722 Hemimethylated DNA-binding domain E3384_13855 IPR022866 Heat shock protein HspQ E3384_13855 IPR036623 Hemimethylated DNA-binding domain superfamily E3384_13860 IPR036291 NAD(P)-binding domain superfamily E3384_13860 IPR003781 CoA-binding E3384_13865 IPR018635 Uncharacterised protein family UPF0319 E3384_13870 IPR011607 Methylglyoxal synthase-like domain E3384_13870 IPR018148 Methylglyoxal synthase, active site E3384_13870 IPR004363 Methylglyoxal synthase E3384_13870 IPR036914 Methylglyoxal synthase-like domain superfamily E3384_13875 IPR014016 UvrD-like helicase, ATP-binding domain E3384_13875 IPR000212 DNA helicase, UvrD/REP type E3384_13875 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_13875 IPR014017 UvrD-like DNA helicase, C-terminal E3384_13875 IPR034739 UvrD/AddA helicase, N-terminal E3384_13875 IPR022161 DNA helicase IV, N-terminal domain E3384_13880 IPR031308 Uncharacterised conserved protein UCP028777 E3384_13880 IPR005185 Inner membrane component domain E3384_13885 IPR010019 Integral membrane protein, YccS E3384_13885 IPR032692 Integral membrane protein YccS, N-terminal E3384_13885 IPR010020 Integral membrane protein, YccS/YhfK E3384_13890 IPR007077 TfoX, C-terminal E3384_13890 IPR026256 Transcriptional regulator, TfoX/Sxy-type E3384_13890 IPR007076 TfoX, N-terminal E3384_13895 IPR004596 Cell division suppressor protein, SulA E3384_13895 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_13900 IPR000498 Outer membrane protein OmpA-like, transmembrane domain E3384_13900 IPR006665 OmpA-like domain E3384_13900 IPR002368 Outer membrane protein, OmpA E3384_13900 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel E3384_13900 IPR006664 Outer membrane protein, bacterial E3384_13900 IPR036737 OmpA-like domain superfamily E3384_13900 IPR006690 Outer membrane protein, OmpA-like, conserved site E3384_13905 IPR035375 MatP, C-terminal ribbon-helix-helix domain E3384_13905 IPR038339 MatP, N-terminal domain superfamily E3384_13905 IPR013321 Arc-type ribbon-helix-helix E3384_13905 IPR009390 Macrodomain Ter protein, MatP E3384_13905 IPR035087 MatP, N-terminal E3384_13910 IPR008269 Peptidase S16, Lon proteolytic domain E3384_13910 IPR027065 Lon protease E3384_13910 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_13910 IPR041699 Lon protease, AAA domain E3384_13910 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_13915 IPR029069 HotDog domain superfamily E3384_13915 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ E3384_13915 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA E3384_13920 IPR007040 Ribosome modulation factor E3384_13920 IPR023200 Ribosome modulation factor domain superfamily E3384_13925 IPR005586 ABC-type transport auxiliary lipoprotein component E3384_13930 IPR003399 Mce/MlaD E3384_13935 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type E3384_13935 IPR007498 Intermembrane transport protein PqiA-like E3384_13940 IPR003439 ABC transporter-like E3384_13940 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_13940 IPR032781 ABC-transporter extension domain E3384_13940 IPR003593 AAA+ ATPase domain E3384_13940 IPR032524 ABC transporter Uup, C-terminal E3384_13940 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily E3384_13940 IPR017871 ABC transporter, conserved site E3384_13945 IPR000241 Putative RNA methylase domain E3384_13945 IPR019614 S-adenosylmethionine-dependent methyltransferase E3384_13945 IPR004114 THUMP domain E3384_13945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_13945 IPR017244 Ribosomal RNA large subunit methyltransferase K/L E3384_13945 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_13950 IPR005303 MOSC, N-terminal beta barrel E3384_13950 IPR011037 Pyruvate kinase-like, insert domain superfamily E3384_13950 IPR005302 Molybdenum cofactor sulfurase, C-terminal E3384_13950 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site E3384_13950 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E3384_13950 IPR036010 2Fe-2S ferredoxin-like superfamily E3384_13950 IPR012675 Beta-grasp domain superfamily E3384_13955 IPR009809 Cell division protein ZapC E3384_13960 IPR001295 Dihydroorotate dehydrogenase, conserved site E3384_13960 IPR005719 Dihydroorotate dehydrogenase, class 2 E3384_13960 IPR005720 Dihydroorotate dehydrogenase domain E3384_13960 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 E3384_13960 IPR013785 Aldolase-type TIM barrel E3384_13965 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily E3384_13965 IPR042097 Aminopeptidase N-like , N-terminal E3384_13965 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold E3384_13965 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily E3384_13965 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase E3384_13965 IPR027268 Peptidase M4/M1, CTD superfamily E3384_13965 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal E3384_13965 IPR014782 Peptidase M1, membrane alanine aminopeptidase E3384_13965 IPR012779 Peptidase M1, alanyl aminopeptidase E3384_13970 IPR010391 DNA damage-inducible protein DinI-like E3384_13970 IPR036687 DinI-like superfamily E3384_13990 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly E3384_13995 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 E3384_13995 IPR037053 Phage tail collar domain superfamily E3384_13995 IPR008969 Carboxypeptidase-like, regulatory domain superfamily E3384_13995 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal E3384_13995 IPR011083 Phage tail collar domain E3384_14060 IPR021027 Transposase, putative, helix-turn-helix domain E3384_14060 IPR001959 Probable transposase, IS891/IS1136/IS1341 E3384_14060 IPR010095 Transposase IS605, OrfB, C-terminal E3384_14075 IPR005564 Major capsid protein GpE E3384_14085 IPR029045 ClpP/crotonase-like domain superfamily E3384_14085 IPR002142 Peptidase S49 E3384_14085 IPR004635 Peptidase S49, SppA E3384_14095 IPR036626 Head-to-tail joining protein W superfamily E3384_14095 IPR004174 Head-to-tail joining protein W E3384_14100 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly E3384_14105 IPR009061 Putative DNA-binding domain superfamily E3384_14105 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_14105 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit E3384_14110 IPR007280 Peptidase, C-terminal, archaeal/bacterial E3384_14115 IPR004929 Spanin, inner membrane subunit E3384_14145 IPR003222 Antitermination protein E3384_14145 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily E3384_14185 IPR002611 IstB-like ATP-binding protein E3384_14185 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14185 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein E3384_14195 IPR037042 Putative bacterial toxin ydaT superfamily E3384_14230 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain E3384_14230 IPR010584 Exodeoxyribonuclease 8 E3384_14250 IPR013762 Integrase-like, catalytic domain superfamily E3384_14250 IPR011010 DNA breaking-rejoining enzyme, catalytic core E3384_14250 IPR002104 Integrase, catalytic domain E3384_14250 IPR010998 Integrase/recombinase, N-terminal E3384_14250 IPR022000 Min27-like integrase, DNA-binding domain E3384_14255 IPR006406 Nicotinate phosphoribosyltransferase E3384_14255 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase E3384_14255 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal E3384_14255 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain E3384_14255 IPR007229 Nicotinate phosphoribosyltransferase family E3384_14260 IPR001463 Sodium:alanine symporter E3384_14265 IPR010081 Diaminopropionate ammonia-lyase E3384_14265 IPR001926 Pyridoxal-phosphate dependent enzyme E3384_14265 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme E3384_14265 IPR019871 Diaminopropionate ammonia-lyase, subgroup E3384_14275 IPR011008 Dimeric alpha-beta barrel E3384_14275 IPR011991 ArsR-like helix-turn-helix domain E3384_14275 IPR000485 AsnC-type HTH domain E3384_14275 IPR036390 Winged helix DNA-binding domain superfamily E3384_14275 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_14275 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain E3384_14275 IPR019888 Transcription regulator AsnC-type E3384_14280 IPR012340 Nucleic acid-binding, OB-fold E3384_14280 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type E3384_14280 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) E3384_14280 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_14280 IPR004522 Asparagine-tRNA ligase E3384_14280 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb E3384_14285 IPR033900 Porin domain, Gram-negative type E3384_14285 IPR023614 Porin domain superfamily E3384_14285 IPR001897 Porin, gammaproteobacterial E3384_14285 IPR001702 Porin, Gram-negative type E3384_14285 IPR013793 Porin, Gram-negative type, conserved site E3384_14290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_14290 IPR004839 Aminotransferase, class I/classII E3384_14290 IPR015424 Pyridoxal phosphate-dependent transferase E3384_14290 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site E3384_14290 IPR000796 Aspartate/other aminotransferase E3384_14290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_14295 IPR001279 Metallo-beta-lactamase E3384_14295 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E3384_14300 IPR010275 Protein of unknown function DUF882 E3384_14300 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily E3384_14300 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_14305 IPR036365 PGBD-like superfamily E3384_14305 IPR002477 Peptidoglycan binding-like E3384_14305 IPR005490 L,D-transpeptidase catalytic domain E3384_14305 IPR038063 L,D-transpeptidase catalytic domain-like E3384_14315 IPR032520 MukB, hinge domain E3384_14315 IPR012090 Chromosome partition protein MukB E3384_14315 IPR007406 MukB, N-terminal domain E3384_14315 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14320 IPR042037 MukE, C-terminal domain E3384_14320 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE E3384_14320 IPR042038 MukE, N-terminal domain E3384_14325 IPR036141 MukF, middle domain superfamily E3384_14325 IPR038198 MukF, C-terminal domain superfamily E3384_14325 IPR033439 Chromosome partition protein MukF, winged-helix domain E3384_14325 IPR033440 Chromosome partition protein MukF, middle domain E3384_14325 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_14325 IPR036390 Winged helix DNA-binding domain superfamily E3384_14325 IPR033441 Chromosome partition protein MukF, C-terminal domain E3384_14325 IPR005582 Chromosome partition protein MukF E3384_14330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_14330 IPR025714 Methyltransferase domain E3384_14330 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase E3384_14335 IPR003848 Domain of unknown function DUF218 E3384_14340 IPR002575 Aminoglycoside phosphotransferase E3384_14340 IPR011009 Protein kinase-like domain superfamily E3384_14350 IPR029044 Nucleotide-diphospho-sugar transferases E3384_14350 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase E3384_14350 IPR003329 Acylneuraminate cytidylyltransferase E3384_14355 IPR005651 Trm112-like E3384_14360 IPR009351 Protein of unknown function DUF1006 E3384_14365 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14365 IPR003758 Tetraacyldisaccharide 4'-kinase E3384_14370 IPR011527 ABC transporter type 1, transmembrane domain E3384_14370 IPR003593 AAA+ ATPase domain E3384_14370 IPR036640 ABC transporter type 1, transmembrane domain superfamily E3384_14370 IPR003439 ABC transporter-like E3384_14370 IPR017871 ABC transporter, conserved site E3384_14370 IPR011917 ABC transporter, lipid A export, MsbA E3384_14370 IPR039421 Type I protein exporter E3384_14370 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14375 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E3384_14375 IPR001279 Metallo-beta-lactamase E3384_14375 IPR004797 Competence protein ComEC/Rec2 E3384_14375 IPR004477 ComEC/Rec2-related protein E3384_14375 IPR035681 ComA-like, MBL domain E3384_14380 IPR005685 Integration host factor, beta subunit E3384_14380 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily E3384_14380 IPR020816 Histone-like DNA-binding protein, conserved site E3384_14380 IPR000119 Histone-like DNA-binding protein E3384_14385 IPR000110 Ribosomal protein S1 E3384_14385 IPR022967 RNA-binding domain, S1 E3384_14385 IPR003029 S1 domain E3384_14385 IPR012340 Nucleic acid-binding, OB-fold E3384_14390 IPR011994 Cytidylate kinase domain E3384_14390 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14390 IPR003136 Cytidylate kinase E3384_14395 IPR001915 Peptidase M48 E3384_14400 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site E3384_14400 IPR001986 Enolpyruvate transferase domain E3384_14400 IPR036968 Enolpyruvate transferase domain superfamily E3384_14400 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta E3384_14400 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase E3384_14405 IPR015424 Pyridoxal phosphate-dependent transferase E3384_14405 IPR022278 Phosphoserine aminotransferase E3384_14405 IPR000192 Aminotransferase class V domain E3384_14405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_14405 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site E3384_14405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_14410 IPR007353 Protein of unknown function DUF421 E3384_14410 IPR023090 UPF0702, alpha/beta domain superfamily E3384_14415 IPR003776 YcaO-like domain E3384_14415 IPR041080 YcaO cyclodehydratase, C-terminal E3384_14420 IPR023999 Formate transporter FocA, putative E3384_14420 IPR000292 Formate/nitrite transporter E3384_14420 IPR024002 Formate/nitrite transporter, conserved site E3384_14420 IPR023271 Aquaporin-like E3384_14430 IPR022747 Salmonella outer protein D E3384_14440 IPR034465 Pyruvate formate-lyase activase E3384_14440 IPR001989 Radical-activating enzyme, conserved site E3384_14440 IPR012838 Pyruvate formate-lyase 1 activating enzyme E3384_14440 IPR034457 Organic radical-activating enzymes E3384_14440 IPR012839 Organic radical enzyme activase E3384_14440 IPR007197 Radical SAM E3384_14440 IPR013785 Aldolase-type TIM barrel E3384_14445 IPR002293 Amino acid/polyamine transporter I E3384_14450 IPR023745 MSF-type transporter, YcaD E3384_14450 IPR011701 Major facilitator superfamily E3384_14450 IPR036259 MFS transporter superfamily E3384_14450 IPR020846 Major facilitator superfamily domain E3384_14455 IPR007059 DMSO reductase anchor subunit (DmsC) E3384_14460 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_14460 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_14460 IPR014297 Dimethylsulphoxide reductase, chain B E3384_14465 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_14465 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_14465 IPR006657 Molybdopterin dinucleotide-binding domain E3384_14465 IPR006656 Molybdopterin oxidoreductase E3384_14465 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site E3384_14465 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_14465 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_14465 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_14465 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE E3384_14470 IPR033729 Serine-tRNA ligase catalytic core domain E3384_14470 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily E3384_14470 IPR015866 Serine-tRNA synthetase, type1, N-terminal E3384_14470 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm E3384_14470 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) E3384_14470 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_14470 IPR002317 Serine-tRNA ligase, type1 E3384_14475 IPR003959 ATPase, AAA-type, core E3384_14475 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14475 IPR021886 MgsA AAA+ ATPase C-terminal E3384_14475 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal E3384_14475 IPR032423 AAA C-terminal domain E3384_14475 IPR003593 AAA+ ATPase domain E3384_14480 IPR029046 Lipoprotein localisation LolA/LolB/LppX E3384_14480 IPR004564 Outer membrane lipoprotein carrier protein LolA-like E3384_14480 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria E3384_14485 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14485 IPR036390 Winged helix DNA-binding domain superfamily E3384_14485 IPR018541 FtsK gamma domain E3384_14485 IPR002543 FtsK domain E3384_14485 IPR041027 FtsK alpha domain E3384_14485 IPR025199 DNA translocase FtsK, 4TM region E3384_14485 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_14490 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_14490 IPR036390 Winged helix DNA-binding domain superfamily E3384_14490 IPR011008 Dimeric alpha-beta barrel E3384_14490 IPR011991 ArsR-like helix-turn-helix domain E3384_14490 IPR019888 Transcription regulator AsnC-type E3384_14490 IPR000485 AsnC-type HTH domain E3384_14490 IPR019885 Transcription regulator HTH, AsnC-type, conserved site E3384_14490 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain E3384_14495 IPR023753 FAD/NAD(P)-binding domain E3384_14495 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_14495 IPR005982 Thioredoxin reductase E3384_14495 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site E3384_14500 IPR017871 ABC transporter, conserved site E3384_14500 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD E3384_14500 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14500 IPR039421 Type I protein exporter E3384_14500 IPR036640 ABC transporter type 1, transmembrane domain superfamily E3384_14500 IPR003593 AAA+ ATPase domain E3384_14500 IPR003439 ABC transporter-like E3384_14500 IPR011527 ABC transporter type 1, transmembrane domain E3384_14505 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14505 IPR003439 ABC transporter-like E3384_14505 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC E3384_14505 IPR036640 ABC transporter type 1, transmembrane domain superfamily E3384_14505 IPR011527 ABC transporter type 1, transmembrane domain E3384_14505 IPR003593 AAA+ ATPase domain E3384_14505 IPR017871 ABC transporter, conserved site E3384_14510 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal E3384_14510 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase E3384_14510 IPR016181 Acyl-CoA N-acyltransferase E3384_14520 IPR004368 Translation initiation factor IF-1 E3384_14520 IPR022967 RNA-binding domain, S1 E3384_14520 IPR006196 RNA-binding domain, S1, IF1 type E3384_14520 IPR012340 Nucleic acid-binding, OB-fold E3384_14525 IPR005119 LysR, substrate-binding E3384_14525 IPR000847 Transcription regulator HTH, LysR E3384_14525 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_14525 IPR036390 Winged helix DNA-binding domain superfamily E3384_14530 IPR003829 Pirin, N-terminal domain E3384_14530 IPR008778 Pirin, C-terminal domain E3384_14530 IPR014710 RmlC-like jelly roll fold E3384_14530 IPR011051 RmlC-like cupin domain superfamily E3384_14530 IPR012093 Pirin E3384_14535 IPR000868 Isochorismatase-like E3384_14535 IPR036380 Isochorismatase-like superfamily E3384_14550 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14550 IPR041546 ClpA/ClpB, AAA lid domain E3384_14550 IPR018368 ClpA/B, conserved site 1 E3384_14550 IPR001270 ClpA/B family E3384_14550 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA E3384_14550 IPR004176 Clp, N-terminal E3384_14550 IPR036628 Clp, N-terminal domain superfamily E3384_14550 IPR019489 Clp ATPase, C-terminal E3384_14550 IPR003959 ATPase, AAA-type, core E3384_14550 IPR003593 AAA+ ATPase domain E3384_14550 IPR028299 ClpA/B, conserved site 2 E3384_14555 IPR022935 ATP-dependent Clp protease adaptor protein ClpS E3384_14555 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like E3384_14555 IPR003769 Adaptor protein ClpS, core E3384_14560 IPR012751 CspD, cold shock E3384_14560 IPR019844 Cold-shock (CSD) domain E3384_14560 IPR011129 Cold shock domain E3384_14560 IPR012156 Cold shock, CspA E3384_14560 IPR012340 Nucleic acid-binding, OB-fold E3384_14560 IPR002059 Cold-shock protein, DNA-binding E3384_14565 IPR017911 ABC transporter, macrolide export, ATP-binding domain E3384_14565 IPR025857 MacB-like periplasmic core domain E3384_14565 IPR003838 ABC transporter permease protein domain E3384_14565 IPR017871 ABC transporter, conserved site E3384_14565 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14565 IPR003593 AAA+ ATPase domain E3384_14565 IPR003439 ABC transporter-like E3384_14570 IPR006143 RND efflux pump, membrane fusion protein E3384_14570 IPR030190 Macrolide export protein MacA E3384_14570 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain E3384_14575 IPR007488 Protein of unknown function DUF535 E3384_14580 IPR006171 TOPRIM domain E3384_14580 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14580 IPR034139 OLD protein-like, TOPRIM domain E3384_14580 IPR022602 Protein of unknown function DUF2813 E3384_14585 IPR005642 Lysine exporter LysO E3384_14590 IPR010048 Hydroxylamine reductase E3384_14590 IPR011254 Prismane-like superfamily E3384_14590 IPR016099 Prismane-like, alpha/beta-sandwich E3384_14590 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase E3384_14590 IPR016100 Prismane, alpha-bundle E3384_14595 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain E3384_14595 IPR012675 Beta-grasp domain superfamily E3384_14595 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain E3384_14595 IPR000951 Phthalate dioxygenase reductase E3384_14595 IPR036010 2Fe-2S ferredoxin-like superfamily E3384_14595 IPR017938 Riboflavin synthase-like beta-barrel E3384_14595 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E3384_14595 IPR001433 Oxidoreductase FAD/NAD(P)-binding E3384_14595 IPR017927 FAD-binding domain, ferredoxin reductase-type E3384_14600 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain E3384_14600 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_14600 IPR029061 Thiamin diphosphate-binding fold E3384_14600 IPR012000 Thiamine pyrophosphate enzyme, central domain E3384_14600 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E3384_14600 IPR000399 TPP-binding enzyme, conserved site E3384_14605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_14605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_14605 IPR015424 Pyridoxal phosphate-dependent transferase E3384_14605 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase E3384_14605 IPR023603 Threonine aldolase E3384_14610 IPR016040 NAD(P)-binding domain E3384_14610 IPR036291 NAD(P)-binding domain superfamily E3384_14610 IPR021295 Protein of unknown function DUF2867 E3384_14615 IPR036291 NAD(P)-binding domain superfamily E3384_14615 IPR001509 NAD-dependent epimerase/dehydratase E3384_14620 IPR036365 PGBD-like superfamily E3384_14620 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily E3384_14620 IPR002502 N-acetylmuramoyl-L-alanine amidase domain E3384_14620 IPR036366 PGBD superfamily E3384_14625 IPR035439 UPF0145 domain superfamily E3384_14625 IPR002765 Uncharacterised protein family UPF0145 E3384_14630 IPR024289 Domain of unknown function DUF3828 E3384_14635 IPR017871 ABC transporter, conserved site E3384_14635 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type E3384_14635 IPR003439 ABC transporter-like E3384_14635 IPR003593 AAA+ ATPase domain E3384_14635 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14640 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter E3384_14640 IPR001320 Ionotropic glutamate receptor E3384_14640 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E3384_14640 IPR018313 Solute-binding protein family 3, conserved site E3384_14645 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain E3384_14645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_14645 IPR035906 MetI-like superfamily E3384_14650 IPR035906 MetI-like superfamily E3384_14650 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain E3384_14650 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_14655 IPR018313 Solute-binding protein family 3, conserved site E3384_14655 IPR001320 Ionotropic glutamate receptor E3384_14655 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E3384_14655 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter E3384_14670 IPR004703 Phosphotransferase system, sugar-specific permease component E3384_14675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_14675 IPR030391 RNA methyltransferase TrmA, conserved site E3384_14675 IPR010280 (Uracil-5)-methyltransferase family E3384_14675 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC E3384_14675 IPR030390 RNA methyltransferase TrmA, active site E3384_14680 IPR019703 Protein of unknown function DUF2593 E3384_14685 IPR035906 MetI-like superfamily E3384_14685 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_14690 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_14690 IPR035906 MetI-like superfamily E3384_14695 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14695 IPR003593 AAA+ ATPase domain E3384_14695 IPR008995 Molybdate/tungstate binding, C-terminal E3384_14695 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit E3384_14695 IPR013611 Transport-associated OB, type 2 E3384_14695 IPR003439 ABC transporter-like E3384_14695 IPR017871 ABC transporter, conserved site E3384_14700 IPR006059 Bacterial extracellular solute-binding protein E3384_14700 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein E3384_14705 IPR019660 Putative sensory transduction regulator YbjN E3384_14710 IPR011761 ATP-grasp fold E3384_14710 IPR013815 ATP-grasp fold, subdomain 1 E3384_14710 IPR013651 ATP-grasp fold, RimK-type E3384_14710 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX E3384_14710 IPR041107 RimK, PreATP-grasp domain E3384_14710 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK E3384_14715 IPR029479 Nitroreductase E3384_14715 IPR000415 Nitroreductase-like E3384_14715 IPR016446 Flavin oxidoreductase Frp family E3384_14720 IPR010815 Protein of unknown function DUF1418 E3384_14725 IPR036249 Thioredoxin-like superfamily E3384_14725 IPR011767 Glutaredoxin active site E3384_14725 IPR002109 Glutaredoxin E3384_14725 IPR014025 Glutaredoxin subgroup E3384_14725 IPR011902 Glutaredoxin, GrxA E3384_14730 IPR020368 Uncharacterised protein family YbjM E3384_14735 IPR006037 Regulator of K+ conductance, C-terminal E3384_14735 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily E3384_14735 IPR006512 YidE/YbjL duplication E3384_14735 IPR023017 Transport protein YbjL, putative E3384_14745 IPR009057 Homeobox-like domain superfamily E3384_14745 IPR001647 DNA-binding HTH domain, TetR-type E3384_14745 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_14750 IPR011701 Major facilitator superfamily E3384_14750 IPR020846 Major facilitator superfamily domain E3384_14750 IPR036259 MFS transporter superfamily E3384_14755 IPR023214 HAD superfamily E3384_14755 IPR000150 Cof family E3384_14755 IPR036412 HAD-like superfamily E3384_14755 IPR006379 HAD-superfamily hydrolase, subfamily IIB E3384_14760 IPR005829 Sugar transporter, conserved site E3384_14760 IPR036259 MFS transporter superfamily E3384_14760 IPR011701 Major facilitator superfamily E3384_14760 IPR020846 Major facilitator superfamily domain E3384_14765 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase E3384_14765 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily E3384_14765 IPR033879 Undecaprenyl-diphosphatase E3384_14770 IPR037171 NagB/RpiA transferase-like E3384_14770 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_14770 IPR014036 DeoR C-terminal sensor domain E3384_14770 IPR001034 DeoR-type HTH domain E3384_14775 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily E3384_14775 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A E3384_14775 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal E3384_14775 IPR012338 Beta-lactamase/transpeptidase-like E3384_14775 IPR015956 Penicillin-binding protein, C-terminal domain superfamily E3384_14775 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal E3384_14780 IPR036282 Glutathione S-transferase, C-terminal domain superfamily E3384_14780 IPR004045 Glutathione S-transferase, N-terminal E3384_14780 IPR010987 Glutathione S-transferase, C-terminal-like E3384_14780 IPR036249 Thioredoxin-like superfamily E3384_14780 IPR004046 Glutathione S-transferase, C-terminal E3384_14785 IPR011042 Six-bladed beta-propeller, TolB-like E3384_14785 IPR012938 Glucose/Sorbosone dehydrogenase E3384_14785 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase E3384_14795 IPR003474 Gluconate transporter E3384_14800 IPR036390 Winged helix DNA-binding domain superfamily E3384_14800 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_14800 IPR000847 Transcription regulator HTH, LysR E3384_14800 IPR005119 LysR, substrate-binding E3384_14805 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_14805 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase E3384_14805 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_14815 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily E3384_14815 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily E3384_14815 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal E3384_14815 IPR006089 Acyl-CoA dehydrogenase, conserved site E3384_14815 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal E3384_14815 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal E3384_14815 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain E3384_14825 IPR001308 Electron transfer flavoprotein alpha subunit/FixB E3384_14825 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal E3384_14825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_14825 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_14825 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site E3384_14825 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal E3384_14825 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal E3384_14830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_14830 IPR012255 Electron transfer flavoprotein, beta subunit E3384_14830 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site E3384_14830 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal E3384_14830 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal E3384_14835 IPR011206 Citrate lyase beta subunit-like E3384_14835 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_14835 IPR040442 Pyruvate kinase-like domain superfamily E3384_14835 IPR005000 HpcH/HpaI aldolase/citrate lyase domain E3384_14840 IPR020359 Biofilm regulator BssR E3384_14845 IPR023404 Radical SAM, alpha/beta horseshoe E3384_14845 IPR002792 TRAM domain E3384_14845 IPR007197 Radical SAM E3384_14845 IPR041582 RimO, TRAM domain E3384_14845 IPR006638 Elp3/MiaB/NifB E3384_14845 IPR005839 Methylthiotransferase E3384_14845 IPR020612 Methylthiotransferase, conserved site E3384_14845 IPR013848 Methylthiotransferase, N-terminal E3384_14845 IPR005840 Ribosomal protein S12 methylthiotransferase RimO E3384_14845 IPR038135 Methylthiotransferase, N-terminal domain superfamily E3384_14850 IPR025966 Oligopeptide transport permease C-like, N-terminal domain E3384_14850 IPR035906 MetI-like superfamily E3384_14850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_14855 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_14855 IPR035906 MetI-like superfamily E3384_14860 IPR000914 Solute-binding protein family 5 domain E3384_14860 IPR030678 Peptide/nickel binding protein, MppA-type E3384_14860 IPR039424 Solute-binding protein family 5 E3384_14865 IPR003593 AAA+ ATPase domain E3384_14865 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14865 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal E3384_14865 IPR017871 ABC transporter, conserved site E3384_14865 IPR003439 ABC transporter-like E3384_14870 IPR000246 Peptidase T2, asparaginase 2 E3384_14870 IPR029055 Nucleophile aminohydrolases, N-terminal E3384_14875 IPR005110 MoeA, N-terminal and linker domain E3384_14875 IPR036425 MoaB/Mog-like domain superfamily E3384_14875 IPR038987 Molybdopterin biosynthesis protein MoeA-like E3384_14875 IPR005111 MoeA, C-terminal, domain IV E3384_14875 IPR008284 Molybdenum cofactor biosynthesis, conserved site E3384_14875 IPR036135 MoeA, N-terminal and linker domain superfamily E3384_14875 IPR001453 MoaB/Mog domain E3384_14875 IPR036688 MoeA, C-terminal, domain IV superfamily E3384_14880 IPR000594 THIF-type NAD/FAD binding fold E3384_14880 IPR035985 Ubiquitin-activating enzyme E3384_14880 IPR012730 Molybdopterin synthase sulfurylase MoeB E3384_14885 IPR034465 Pyruvate formate-lyase activase E3384_14885 IPR013785 Aldolase-type TIM barrel E3384_14885 IPR034457 Organic radical-activating enzymes E3384_14885 IPR012839 Organic radical enzyme activase E3384_14885 IPR001989 Radical-activating enzyme, conserved site E3384_14885 IPR007197 Radical SAM E3384_14895 IPR023214 HAD superfamily E3384_14895 IPR036412 HAD-like superfamily E3384_14895 IPR000150 Cof family E3384_14895 IPR006379 HAD-superfamily hydrolase, subfamily IIB E3384_14900 IPR027443 Isopenicillin N synthase-like E3384_14900 IPR010856 Protein of unknown function DUF1479 E3384_14905 IPR003593 AAA+ ATPase domain E3384_14905 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14905 IPR003439 ABC transporter-like E3384_14905 IPR032781 ABC-transporter extension domain E3384_14910 IPR005490 L,D-transpeptidase catalytic domain E3384_14910 IPR041597 L,D-transpeptidase C-terminal domain E3384_14910 IPR038063 L,D-transpeptidase catalytic domain-like E3384_14915 IPR004680 Citrate transporter-like domain E3384_14920 IPR036390 Winged helix DNA-binding domain superfamily E3384_14920 IPR001367 Iron dependent repressor, metal binding and dimerisation domain E3384_14920 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_14920 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily E3384_14920 IPR022687 DTXR-type HTH domain E3384_14920 IPR022689 Iron dependent repressor E3384_14930 IPR017850 Alkaline-phosphatase-like, core domain superfamily E3384_14930 IPR040423 Phosphoethanolamine transferase E3384_14930 IPR000917 Sulfatase, N-terminal E3384_14935 IPR000758 Virulence-related outer membrane protein E3384_14935 IPR027385 Outer membrane protein beta-barrel domain E3384_14935 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel E3384_14940 IPR000620 EamA domain E3384_14945 IPR023188 DNA-binding protein Dps, conserved site E3384_14945 IPR009078 Ferritin-like superfamily E3384_14945 IPR002177 DNA-binding protein Dps E3384_14945 IPR023067 DNA protection during starvation protein, gammaproteobacteria E3384_14945 IPR012347 Ferritin-like E3384_14945 IPR008331 Ferritin/DPS protein domain E3384_14950 IPR001320 Ionotropic glutamate receptor E3384_14950 IPR018313 Solute-binding protein family 3, conserved site E3384_14950 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E3384_14955 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain E3384_14955 IPR035906 MetI-like superfamily E3384_14955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_14960 IPR003593 AAA+ ATPase domain E3384_14960 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type E3384_14960 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14960 IPR017871 ABC transporter, conserved site E3384_14960 IPR003439 ABC transporter-like E3384_14965 IPR011066 Mechanosensitive ion channel MscS, C-terminal E3384_14965 IPR006685 Mechanosensitive ion channel MscS E3384_14965 IPR010920 LSM domain superfamily E3384_14965 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 E3384_14965 IPR023408 Mechanosensitive ion channel MscS domain superfamily E3384_14970 IPR016909 Ribosomal RNA large subunit methyltransferase F E3384_14970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_14970 IPR010286 METTL16/RlmF family E3384_14975 IPR000962 Zinc finger, DksA/TraR C4-type E3384_14975 IPR020458 Zinc finger, DksA/TraR C4-type conserved site E3384_14975 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria E3384_14980 IPR025543 Dodecin-like E3384_14980 IPR010854 Domain of unknown function DUF1471 E3384_14980 IPR036275 YdgH-like superfamily E3384_14985 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily E3384_14985 IPR017459 Glycosyl transferase family 3, N-terminal domain E3384_14985 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily E3384_14990 IPR006554 Helicase-like, DEXD box c2 type E3384_14990 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_14990 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type E3384_14990 IPR001650 Helicase, C-terminal E3384_14990 IPR006555 ATP-dependent helicase, C-terminal E3384_14990 IPR010614 DEAD2 E3384_14990 IPR039000 ATP-dependent DNA helicase DinG E3384_14990 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_14995 IPR014014 RNA helicase, DEAD-box type, Q motif E3384_14995 IPR028622 ATP-dependent RNA helicase RhlE E3384_14995 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site E3384_14995 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_14995 IPR001650 Helicase, C-terminal E3384_14995 IPR011545 DEAD/DEAH box helicase domain E3384_14995 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15000 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E3384_15000 IPR009057 Homeobox-like domain superfamily E3384_15000 IPR001647 DNA-binding HTH domain, TetR-type E3384_15000 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_15000 IPR015292 Transcription regulator YbiH, C-terminal E3384_15005 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain E3384_15005 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG E3384_15010 IPR017871 ABC transporter, conserved site E3384_15010 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15010 IPR003439 ABC transporter-like E3384_15010 IPR003593 AAA+ ATPase domain E3384_15015 IPR000412 ABC-2 transporter E3384_15020 IPR000412 ABC-2 transporter E3384_15025 IPR021303 Uncharacterised protein family, inner membrane, YbhQ E3384_15030 IPR005135 Endonuclease/exonuclease/phosphatase E3384_15030 IPR036691 Endonuclease/exonuclease/phosphatase superfamily E3384_15035 IPR030872 Cardiolipin synthase B E3384_15035 IPR025202 Phospholipase D-like domain E3384_15035 IPR001736 Phospholipase D/Transphosphatidylase E3384_15040 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD E3384_15060 IPR006214 Bax inhibitor 1-related E3384_15065 IPR003448 Molybdopterin biosynthesis MoaE E3384_15065 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily E3384_15070 IPR003749 Sulfur carrier ThiS/MoaD-like E3384_15070 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp E3384_15070 IPR012675 Beta-grasp domain superfamily E3384_15075 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain E3384_15075 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily E3384_15075 IPR023045 Molybdenum cofactor biosynthesis C E3384_15080 IPR008284 Molybdenum cofactor biosynthesis, conserved site E3384_15080 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria E3384_15080 IPR001453 MoaB/Mog domain E3384_15080 IPR036425 MoaB/Mog-like domain superfamily E3384_15080 IPR012245 Molybdenum cofactor biosynthesis protein MoaB E3384_15085 IPR007197 Radical SAM E3384_15085 IPR013785 Aldolase-type TIM barrel E3384_15085 IPR006638 Elp3/MiaB/NifB E3384_15085 IPR010505 Molybdenum cofactor synthesis C-terminal E3384_15085 IPR013483 Molybdenum cofactor biosynthesis protein A E3384_15085 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site E3384_15090 IPR038136 Gluconeogenesis factor superfamily E3384_15090 IPR010119 Gluconeogenesis factor E3384_15090 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 E3384_15095 IPR003591 Leucine-rich repeat, typical subtype E3384_15095 IPR032675 Leucine-rich repeat domain superfamily E3384_15095 IPR029487 Novel E3 ligase domain E3384_15095 IPR032674 LRR-containing bacterial E3 ligase, N-terminal E3384_15095 IPR001611 Leucine-rich repeat E3384_15105 IPR004807 UvrABC system, subunit B E3384_15105 IPR041471 UvrB, interaction domain E3384_15105 IPR036876 UVR domain superfamily E3384_15105 IPR001943 UVR domain E3384_15105 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15105 IPR001650 Helicase, C-terminal E3384_15105 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_15105 IPR006935 Helicase/UvrB, N-terminal E3384_15105 IPR024759 UvrB, YAD/RRR-motif-containing domain E3384_15115 IPR004472 Dethiobiotin synthase BioD E3384_15115 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_15120 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC E3384_15120 IPR013216 Methyltransferase type 11 E3384_15125 IPR004839 Aminotransferase, class I/classII E3384_15125 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_15125 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_15125 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site E3384_15125 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type E3384_15125 IPR015424 Pyridoxal phosphate-dependent transferase E3384_15125 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria E3384_15130 IPR006638 Elp3/MiaB/NifB E3384_15130 IPR007197 Radical SAM E3384_15130 IPR013785 Aldolase-type TIM barrel E3384_15130 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB E3384_15130 IPR010722 Biotin and thiamin synthesis-associated domain E3384_15130 IPR024177 Biotin synthase E3384_15135 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_15135 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_15135 IPR015424 Pyridoxal phosphate-dependent transferase E3384_15135 IPR005814 Aminotransferase class-III E3384_15135 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA E3384_15140 IPR008914 Phosphatidylethanolamine-binding protein E3384_15140 IPR036610 PEBP-like superfamily E3384_15140 IPR005247 YbhB/YbcL E3384_15145 IPR001106 Aromatic amino acid lyase E3384_15145 IPR005921 Histidine ammonia-lyase E3384_15145 IPR008948 L-Aspartase-like E3384_15145 IPR022313 Phenylalanine/histidine ammonia-lyases, active site E3384_15145 IPR024083 Fumarase/histidase, N-terminal E3384_15150 IPR035085 Urocanase, Rossmann-like domain E3384_15150 IPR023636 Urocanase conserved site E3384_15150 IPR036190 Urocanase superfamily E3384_15150 IPR035400 Urocanase, N-terminal domain E3384_15150 IPR038364 Urocanase, central domain superfamily E3384_15150 IPR035401 Urocanase, C-terminal domain E3384_15150 IPR023637 Urocanase E3384_15155 IPR036390 Winged helix DNA-binding domain superfamily E3384_15155 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily E3384_15155 IPR010248 Histidine utilization repressor E3384_15155 IPR000524 Transcription regulator HTH, GntR E3384_15155 IPR011663 UbiC transcription regulator-associated E3384_15155 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_15160 IPR006035 Ureohydrolase E3384_15160 IPR005923 Formiminoglutamase E3384_15160 IPR023696 Ureohydrolase domain superfamily E3384_15165 IPR032466 Metal-dependent hydrolase E3384_15165 IPR005920 Imidazolonepropionase E3384_15165 IPR011059 Metal-dependent hydrolase, composite domain superfamily E3384_15165 IPR006680 Amidohydrolase-related E3384_15170 IPR000070 Pectinesterase, catalytic E3384_15170 IPR011050 Pectin lyase fold/virulence factor E3384_15170 IPR012334 Pectin lyase fold E3384_15170 IPR033131 Pectinesterase, Asp active site E3384_15175 IPR015943 WD40/YVTN repeat-like-containing domain superfamily E3384_15175 IPR022528 6-phosphogluconolactonase, YbhE-type E3384_15175 IPR019405 Lactonase, 7-bladed beta propeller E3384_15175 IPR011045 Nitrous oxide reductase, N-terminal E3384_15180 IPR023214 HAD superfamily E3384_15180 IPR006379 HAD-superfamily hydrolase, subfamily IIB E3384_15180 IPR000150 Cof family E3384_15180 IPR036412 HAD-like superfamily E3384_15185 IPR017871 ABC transporter, conserved site E3384_15185 IPR004606 Molybdenum-pterin binding E3384_15185 IPR003439 ABC transporter-like E3384_15185 IPR005116 Transport-associated OB, type 1 E3384_15185 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15185 IPR015852 ABC transporter, molybdenum import, ModC E3384_15185 IPR003593 AAA+ ATPase domain E3384_15185 IPR008995 Molybdate/tungstate binding, C-terminal E3384_15185 IPR011868 Molybdate ABC transporter, ATP-binding protein E3384_15190 IPR011867 Molybdate ABC transporter, permease protein E3384_15190 IPR035906 MetI-like superfamily E3384_15190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_15195 IPR005950 Molybdate ABC transporter, substrate-binding protein E3384_15200 IPR019702 Multidrug efflux pump accessory protein AcrZ E3384_15205 IPR003725 Molybdenum-binding protein ModE, N-terminal E3384_15205 IPR008995 Molybdate/tungstate binding, C-terminal E3384_15205 IPR016462 Molybdate-dependent transcriptional regulator ModE E3384_15205 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_15205 IPR004606 Molybdenum-pterin binding E3384_15205 IPR036390 Winged helix DNA-binding domain superfamily E3384_15205 IPR005116 Transport-associated OB, type 1 E3384_15205 IPR000847 Transcription regulator HTH, LysR E3384_15210 IPR003439 ABC transporter-like E3384_15210 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15210 IPR003593 AAA+ ATPase domain E3384_15220 IPR016040 NAD(P)-binding domain E3384_15220 IPR036291 NAD(P)-binding domain superfamily E3384_15220 IPR005886 UDP-glucose 4-epimerase E3384_15225 IPR036265 HIT-like superfamily E3384_15225 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site E3384_15225 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal E3384_15225 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal E3384_15225 IPR001937 Galactose-1-phosphate uridyl transferase, class I E3384_15230 IPR000705 Galactokinase E3384_15230 IPR022963 Galactokinase, bacterial E3384_15230 IPR036554 GHMP kinase, C-terminal domain superfamily E3384_15230 IPR006204 GHMP kinase N-terminal domain E3384_15230 IPR006206 Mevalonate/galactokinase E3384_15230 IPR019539 Galactokinase galactose-binding domain E3384_15230 IPR019741 Galactokinase, conserved site E3384_15230 IPR013750 GHMP kinase, C-terminal domain E3384_15230 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_15230 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_15230 IPR006203 GHMP kinase, ATP-binding, conserved site E3384_15235 IPR018052 Aldose 1-epimerase, conserved site E3384_15235 IPR013458 Aldose 1-epimerase, bacterial E3384_15235 IPR011013 Galactose mutarotase-like domain superfamily E3384_15235 IPR014718 Glycoside hydrolase-type carbohydrate-binding E3384_15235 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase E3384_15235 IPR015443 Aldose 1-epimerase E3384_15240 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site E3384_15240 IPR013078 Histidine phosphatase superfamily, clade-1 E3384_15240 IPR029033 Histidine phosphatase superfamily E3384_15240 IPR005952 Phosphoglycerate mutase 1 E3384_15245 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15245 IPR017871 ABC transporter, conserved site E3384_15245 IPR003439 ABC transporter-like E3384_15245 IPR003593 AAA+ ATPase domain E3384_15250 IPR037294 ABC transporter, BtuC-like E3384_15250 IPR000522 ABC transporter, permease protein, BtuC-like E3384_15255 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG E3384_15255 IPR002736 Triphosphoribosyl-dephospho-CoA protein E3384_15265 IPR003379 Carboxylase, conserved domain E3384_15265 IPR011053 Single hybrid motif E3384_15265 IPR005776 Oxaloacetate decarboxylase, alpha subunit E3384_15265 IPR000891 Pyruvate carboxyltransferase E3384_15265 IPR013785 Aldolase-type TIM barrel E3384_15265 IPR001882 Biotin-binding site E3384_15265 IPR000089 Biotin/lipoyl attachment E3384_15270 IPR023424 Oxaloacetate decarboxylase gamma chain, probable E3384_15270 IPR005899 Sodium ion-translocating decarboxylase E3384_15275 IPR031312 Sodium/sulphate symporter, conserved site E3384_15275 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily E3384_15275 IPR004680 Citrate transporter-like domain E3384_15275 IPR006037 Regulator of K+ conductance, C-terminal E3384_15280 IPR036390 Winged helix DNA-binding domain superfamily E3384_15280 IPR000847 Transcription regulator HTH, LysR E3384_15280 IPR005119 LysR, substrate-binding E3384_15280 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_15285 IPR005119 LysR, substrate-binding E3384_15285 IPR000847 Transcription regulator HTH, LysR E3384_15285 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_15285 IPR036390 Winged helix DNA-binding domain superfamily E3384_15290 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain E3384_15295 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain E3384_15295 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain E3384_15295 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily E3384_15295 IPR011167 Iron-dependent fumarate hydratase E3384_15295 IPR020557 Fumarate lyase, conserved site E3384_15300 IPR006219 DHAP synthase, class 1 E3384_15300 IPR006218 DAHP synthetase I/KDSA E3384_15300 IPR013785 Aldolase-type TIM barrel E3384_15305 IPR020363 Uncharacterised protein family YbgS E3384_15310 IPR027469 Cation efflux transmembrane domain superfamily E3384_15310 IPR036837 Cation efflux protein, cytoplasmic domain superfamily E3384_15310 IPR023500 Zinc transporter ZitB E3384_15310 IPR002524 Cation efflux protein E3384_15315 IPR006419 Nicotinamide mononucleotide transporter PnuC E3384_15320 IPR036094 Quinolinate synthetase A superfamily E3384_15320 IPR023513 Quinolinate synthase A, type 1 E3384_15320 IPR003473 Quinolinate synthetase A E3384_15350 IPR013026 Tetratricopeptide repeat-containing domain E3384_15350 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_15350 IPR019734 Tetratricopeptide repeat E3384_15350 IPR032519 YbgF, trimerisation domain E3384_15350 IPR014162 Cell division coordinator CpoB, C-terminal E3384_15350 IPR034706 Cell division coordinator CpoB E3384_15355 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal E3384_15355 IPR039001 Peptidoglycan-associated lipoprotein E3384_15355 IPR036737 OmpA-like domain superfamily E3384_15355 IPR006665 OmpA-like domain E3384_15355 IPR006664 Outer membrane protein, bacterial E3384_15355 IPR006690 Outer membrane protein, OmpA-like, conserved site E3384_15360 IPR007195 TolB, N-terminal E3384_15360 IPR011659 WD40-like Beta Propeller E3384_15360 IPR011042 Six-bladed beta-propeller, TolB-like E3384_15360 IPR036752 TolB, N-terminal domain superfamily E3384_15360 IPR014167 Tol-Pal system protein TolB E3384_15365 IPR014161 Tol-Pal system, TolA E3384_15370 IPR014168 Tol-Pal system protein TolR E3384_15370 IPR003400 Biopolymer transport protein ExbD/TolR E3384_15375 IPR014163 Tol-Pal system, TolQ E3384_15375 IPR002898 MotA/TolQ/ExbB proton channel E3384_15380 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site E3384_15380 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family E3384_15380 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase E3384_15380 IPR006683 Thioesterase domain E3384_15380 IPR029069 HotDog domain superfamily E3384_15385 IPR011846 Cyd operon protein YbgE E3384_15390 IPR012994 Membrane bound YbgT-like E3384_15390 IPR011724 Cyd operon protein YbgT E3384_15395 IPR003317 Cytochrome ubiquinol oxidase subunit 2 E3384_15400 IPR002585 Cytochrome ubiquinol oxidase subunit 1 E3384_15405 IPR003781 CoA-binding E3384_15405 IPR005810 Succinyl-CoA ligase, alpha subunit E3384_15405 IPR016102 Succinyl-CoA synthetase-like E3384_15405 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site E3384_15405 IPR036291 NAD(P)-binding domain superfamily E3384_15405 IPR005811 ATP-citrate lyase/succinyl-CoA ligase E3384_15405 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site E3384_15410 IPR013815 ATP-grasp fold, subdomain 1 E3384_15410 IPR011761 ATP-grasp fold E3384_15410 IPR005811 ATP-citrate lyase/succinyl-CoA ligase E3384_15410 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site E3384_15410 IPR005809 Succinate--CoA synthetase, beta subunit E3384_15410 IPR016102 Succinyl-CoA synthetase-like E3384_15410 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type E3384_15415 IPR000089 Biotin/lipoyl attachment E3384_15415 IPR011053 Single hybrid motif E3384_15415 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site E3384_15415 IPR036625 E3-binding domain superfamily E3384_15415 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily E3384_15415 IPR004167 Peripheral subunit-binding domain E3384_15415 IPR006255 Dihydrolipoamide succinyltransferase E3384_15415 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain E3384_15420 IPR001017 Dehydrogenase, E1 component E3384_15420 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain E3384_15420 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal E3384_15420 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily E3384_15420 IPR029061 Thiamin diphosphate-binding fold E3384_15420 IPR011603 2-oxoglutarate dehydrogenase E1 component E3384_15420 IPR005475 Transketolase-like, pyrimidine-binding domain E3384_15425 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_15425 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_15425 IPR012675 Beta-grasp domain superfamily E3384_15425 IPR009051 Alpha-helical ferredoxin E3384_15425 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein E3384_15425 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal E3384_15425 IPR036010 2Fe-2S ferredoxin-like superfamily E3384_15425 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E3384_15430 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit E3384_15430 IPR011281 Succinate dehydrogenase, flavoprotein subunit E3384_15430 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily E3384_15430 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal E3384_15430 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily E3384_15430 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site E3384_15430 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_15430 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain E3384_15435 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit E3384_15435 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit E3384_15435 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor E3384_15440 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit E3384_15440 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit E3384_15440 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site E3384_15440 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit E3384_15445 IPR024176 Citrate synthase, bacterial-type E3384_15445 IPR036969 Citrate synthase superfamily E3384_15445 IPR002020 Citrate synthase E3384_15445 IPR016143 Citrate synthase-like, small alpha subdomain E3384_15445 IPR016142 Citrate synthase-like, large alpha subdomain E3384_15445 IPR019810 Citrate synthase active site E3384_15445 IPR010953 Citrate synthase, type I E3384_15450 IPR017516 AbrB duplication E3384_15450 IPR007820 AbrB family E3384_15455 IPR010979 Ribosomal protein S13-like, H2TH E3384_15455 IPR010663 Zinc finger, FPG/IleRS-type E3384_15455 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding E3384_15455 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site E3384_15455 IPR023713 Endonuclease VIII E3384_15455 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type E3384_15455 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain E3384_15455 IPR035937 MutM-like, N-terminal E3384_15460 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel E3384_15460 IPR005501 LamB/YcsF/PxpA-like E3384_15465 IPR029000 Cyclophilin-like domain superfamily E3384_15465 IPR003778 Carboxyltransferase domain, subdomain A and B E3384_15470 IPR029000 Cyclophilin-like domain superfamily E3384_15470 IPR010016 KipI family E3384_15470 IPR003833 Carboxyltransferase domain, subdomain C and D E3384_15475 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 E3384_15475 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily E3384_15480 IPR000109 Proton-dependent oligopeptide transporter family E3384_15480 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site E3384_15480 IPR020846 Major facilitator superfamily domain E3384_15480 IPR005279 Dipeptide/tripeptide permease E3384_15480 IPR023777 Amino acid/peptide transporter family, dipeptide permease D E3384_15480 IPR036259 MFS transporter superfamily E3384_15485 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily E3384_15485 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily E3384_15485 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain E3384_15485 IPR002081 Cryptochrome/DNA photolyase class 1 E3384_15485 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal E3384_15485 IPR006050 DNA photolyase, N-terminal E3384_15485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_15490 IPR019663 Uncharacterised protein YbfA E3384_15495 IPR011726 K+ transporting P-type ATPase, F subunit E3384_15500 IPR004623 Potassium-transporting ATPase A chain E3384_15505 IPR036412 HAD-like superfamily E3384_15505 IPR008250 P-type ATPase, A domain superfamily E3384_15505 IPR006391 P-type ATPase, B chain, subfamily IA E3384_15505 IPR001757 P-type ATPase E3384_15505 IPR023298 P-type ATPase, transmembrane domain superfamily E3384_15505 IPR023299 P-type ATPase, cytoplasmic domain N E3384_15505 IPR018303 P-type ATPase, phosphorylation site E3384_15510 IPR003820 Potassium-transporting ATPase C chain E3384_15515 IPR005467 Histidine kinase domain E3384_15515 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_15515 IPR003018 GAF domain E3384_15515 IPR029016 GAF-like domain superfamily E3384_15515 IPR003594 Histidine kinase/HSP90-like ATPase E3384_15515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_15515 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_15515 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal E3384_15515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_15515 IPR025201 Sensor protein KdpD, transmembrane domain E3384_15515 IPR038318 KdpD, transmembrane domain superfamily E3384_15520 IPR039420 Transcriptional regulatory protein WalR-like E3384_15520 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_15520 IPR011006 CheY-like superfamily E3384_15520 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_15520 IPR001789 Signal transduction response regulator, receiver domain E3384_15530 IPR011006 CheY-like superfamily E3384_15530 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_15530 IPR015424 Pyridoxal phosphate-dependent transferase E3384_15530 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily E3384_15530 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal E3384_15530 IPR027464 Ornithine decarboxylase, N-terminal E3384_15530 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal E3384_15530 IPR027568 Ornithine decarboxylase SpeF E3384_15530 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_15530 IPR000310 Orn/Lys/Arg decarboxylase, major domain E3384_15530 IPR011193 Ornithine/lysine/arginine decarboxylase E3384_15535 IPR027566 Putrescine transporter PotE E3384_15535 IPR002293 Amino acid/polyamine transporter I E3384_15535 IPR004754 Amino acid antiporter E3384_15545 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III E3384_15545 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I E3384_15545 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II E3384_15545 IPR016066 Alpha-D-phosphohexomutase, conserved site E3384_15545 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily E3384_15545 IPR005843 Alpha-D-phosphohexomutase, C-terminal E3384_15545 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III E3384_15545 IPR005852 Phosphoglucomutase, alpha-D-glucose specific E3384_15550 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily E3384_15550 IPR013321 Arc-type ribbon-helix-helix E3384_15550 IPR010985 Ribbon-helix-helix E3384_15550 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal E3384_15550 IPR005621 Negative modulator of initiation of replication SeqA E3384_15550 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain E3384_15555 IPR029058 Alpha/Beta hydrolase fold E3384_15555 IPR000073 Alpha/beta hydrolase fold-1 E3384_15560 IPR010985 Ribbon-helix-helix E3384_15560 IPR002145 Ribbon-helix-helix protein, CopG E3384_15565 IPR029039 Flavoprotein-like superfamily E3384_15565 IPR010086 Flavodoxin, long chain E3384_15565 IPR001226 Flavodoxin, conserved site E3384_15565 IPR008254 Flavodoxin/nitric oxide synthase E3384_15570 IPR002481 Ferric-uptake regulator E3384_15570 IPR036390 Winged helix DNA-binding domain superfamily E3384_15570 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_15575 IPR000847 Transcription regulator HTH, LysR E3384_15575 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_15575 IPR036390 Winged helix DNA-binding domain superfamily E3384_15575 IPR005119 LysR, substrate-binding E3384_15580 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain E3384_15580 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily E3384_15580 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_15580 IPR010960 Flavocytochrome c E3384_15580 IPR012286 Tetrahaem cytochrome domain E3384_15580 IPR036280 Multiheme cytochrome superfamily E3384_15580 IPR011031 Multihaem cytochrome E3384_15585 IPR036197 NarG-like superfamily E3384_15585 IPR012830 Citrate utilization protein B E3384_15590 IPR004736 MFS transporter, metabolite:H symporter E3384_15590 IPR020846 Major facilitator superfamily domain E3384_15590 IPR036259 MFS transporter superfamily E3384_15590 IPR011701 Major facilitator superfamily E3384_15590 IPR005829 Sugar transporter, conserved site E3384_15595 IPR025727 YbfN-like lipoprotein E3384_15600 IPR005318 Outer membrane porin, bacterial E3384_15600 IPR023614 Porin domain superfamily E3384_15605 IPR022861 Glutamine-tRNA ligase, bacterial E3384_15605 IPR004514 Glutamine-tRNA synthetase E3384_15605 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily E3384_15605 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal E3384_15605 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E3384_15605 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily E3384_15605 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain E3384_15605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_15605 IPR000924 Glutamyl/glutaminyl-tRNA synthetase E3384_15605 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain E3384_15610 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site E3384_15610 IPR036878 Glucose permease domain IIB E3384_15610 IPR011055 Duplicated hybrid motif E3384_15610 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 E3384_15610 IPR003352 Phosphotransferase system, EIIC E3384_15610 IPR013013 Phosphotransferase system, EIIC component, type 1 E3384_15610 IPR001996 Phosphotransferase system, IIB component, type 1 E3384_15610 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component E3384_15615 IPR037171 NagB/RpiA transferase-like E3384_15615 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase E3384_15615 IPR018321 Glucosamine-6-phosphate isomerase, conserved site E3384_15615 IPR004547 Glucosamine-6-phosphate isomerase E3384_15620 IPR011059 Metal-dependent hydrolase, composite domain superfamily E3384_15620 IPR032466 Metal-dependent hydrolase E3384_15620 IPR003764 N-acetylglucosamine-6-phosphate deacetylase E3384_15620 IPR006680 Amidohydrolase-related E3384_15625 IPR036390 Winged helix DNA-binding domain superfamily E3384_15625 IPR000835 MarR-type HTH domain E3384_15625 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_15625 IPR000600 ROK family E3384_15630 IPR023214 HAD superfamily E3384_15630 IPR006357 HAD-superfamily hydrolase, subfamily IIA E3384_15630 IPR036412 HAD-like superfamily E3384_15635 IPR006426 Asparagine synthase, glutamine-hydrolyzing E3384_15635 IPR001962 Asparagine synthase E3384_15635 IPR033738 Asparagine synthase, N-terminal domain E3384_15635 IPR017932 Glutamine amidotransferase type 2 domain E3384_15635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_15635 IPR029055 Nucleophile aminohydrolases, N-terminal E3384_15675 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 E3384_15675 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site E3384_15675 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_15675 IPR002938 FAD-binding domain E3384_15680 IPR007197 Radical SAM E3384_15680 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB E3384_15680 IPR006638 Elp3/MiaB/NifB E3384_15680 IPR005839 Methylthiotransferase E3384_15680 IPR020612 Methylthiotransferase, conserved site E3384_15680 IPR038135 Methylthiotransferase, N-terminal domain superfamily E3384_15680 IPR013848 Methylthiotransferase, N-terminal E3384_15680 IPR023404 Radical SAM, alpha/beta horseshoe E3384_15680 IPR002792 TRAM domain E3384_15685 IPR003714 PhoH-like protein E3384_15685 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15690 IPR020549 Endoribonuclease YbeY, conserved site E3384_15690 IPR002036 Endoribonuclease YbeY E3384_15690 IPR023091 Metalloprotease catalytic domain superfamily, predicted E3384_15695 IPR036318 FAD-binding, type PCMH-like superfamily E3384_15695 IPR016169 FAD-binding, type PCMH, subdomain 2 E3384_15695 IPR005170 Transporter-associated domain E3384_15695 IPR000644 CBS domain E3384_15700 IPR036526 Carbon-nitrogen hydrolase superfamily E3384_15700 IPR003010 Carbon-nitrogen hydrolase E3384_15700 IPR004563 Apolipoprotein N-acyltransferase E3384_15705 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E3384_15710 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_15710 IPR035906 MetI-like superfamily E3384_15710 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ E3384_15710 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain E3384_15715 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_15715 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM E3384_15715 IPR035906 MetI-like superfamily E3384_15715 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain E3384_15720 IPR003593 AAA+ ATPase domain E3384_15720 IPR003439 ABC transporter-like E3384_15720 IPR017871 ABC transporter, conserved site E3384_15720 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15720 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type E3384_15725 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site E3384_15725 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain E3384_15725 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA E3384_15725 IPR036452 Ribonucleoside hydrolase-like E3384_15725 IPR023186 Inosine/uridine-preferring nucleoside hydrolase E3384_15735 IPR018181 Heat shock protein 70, conserved site E3384_15735 IPR042030 Chaperone protein HscC, nucleotide-binding domain E3384_15735 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily E3384_15735 IPR013126 Heat shock protein 70 family E3384_15740 IPR036869 Chaperone J-domain superfamily E3384_15745 IPR009677 Protein of unknown function DUF1266 E3384_15750 IPR036869 Chaperone J-domain superfamily E3384_15750 IPR001623 DnaJ domain E3384_15755 IPR009677 Protein of unknown function DUF1266 E3384_15765 IPR009912 Zinc-ribbon containing domain E3384_15770 IPR002197 DNA binding HTH domain, Fis-type E3384_15770 IPR013767 PAS fold E3384_15770 IPR035965 PAS domain superfamily E3384_15770 IPR000014 PAS domain E3384_15770 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15770 IPR036291 NAD(P)-binding domain superfamily E3384_15770 IPR009057 Homeobox-like domain superfamily E3384_15770 IPR003593 AAA+ ATPase domain E3384_15770 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_15770 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E3384_15770 IPR025944 Sigma-54 interaction domain, conserved site E3384_15770 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_15775 IPR004684 2-keto-3-deoxygluconate permease E3384_15780 IPR007392 D-galactarate/Altronate dehydratase, C-terminal E3384_15790 IPR002302 Leucine-tRNA ligase E3384_15790 IPR002300 Aminoacyl-tRNA synthetase, class Ia E3384_15790 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E3384_15790 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain E3384_15790 IPR025709 Leucyl-tRNA synthetase, editing domain E3384_15790 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E3384_15790 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding E3384_15790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_15795 IPR007485 LPS-assembly lipoprotein LptE E3384_15800 IPR032780 DNA polymerase III subunit delta, C-terminal E3384_15800 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_15800 IPR005790 DNA polymerase III, delta subunit E3384_15800 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal E3384_15800 IPR010372 DNA polymerase III delta, N-terminal E3384_15805 IPR004821 Cytidyltransferase-like domain E3384_15805 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase E3384_15805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_15810 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site E3384_15810 IPR004839 Aminotransferase, class I/classII E3384_15810 IPR005860 L-threonine-O-3-phosphate decarboxylase E3384_15810 IPR015424 Pyridoxal phosphate-dependent transferase E3384_15810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_15810 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_15815 IPR013078 Histidine phosphatase superfamily, clade-1 E3384_15815 IPR017578 Alpha-ribazole phosphatase, CobC E3384_15815 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site E3384_15815 IPR029033 Histidine phosphatase superfamily E3384_15820 IPR004394 Protein Iojap/ribosomal silencing factor RsfS E3384_15825 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E3384_15825 IPR003742 RNA methyltransferase RlmH E3384_15825 IPR029028 Alpha/beta knot methyltransferases E3384_15830 IPR005311 Penicillin-binding protein, dimerisation domain E3384_15830 IPR036138 Penicillin-binding protein, dimerisation domain superfamily E3384_15830 IPR012338 Beta-lactamase/transpeptidase-like E3384_15830 IPR001460 Penicillin-binding protein, transpeptidase E3384_15830 IPR017790 Penicillin-binding protein 2 E3384_15835 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA E3384_15835 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB E3384_15835 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site E3384_15840 IPR036680 Sporulation-like domain superfamily E3384_15840 IPR007730 Sporulation-like domain E3384_15840 IPR012997 Rare lipoprotein A E3384_15840 IPR036908 RlpA-like domain superfamily E3384_15840 IPR009009 RlpA-like protein, double-psi beta-barrel domain E3384_15840 IPR034718 Endolytic peptidoglycan transglycosylase RlpA E3384_15845 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal E3384_15845 IPR012338 Beta-lactamase/transpeptidase-like E3384_15845 IPR015956 Penicillin-binding protein, C-terminal domain superfamily E3384_15845 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A E3384_15845 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily E3384_15845 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal E3384_15850 IPR027471 YbeD-like domain superfamily E3384_15850 IPR007454 Uncharacterised protein family UPF0250 E3384_15855 IPR020605 Octanoyltransferase, conserved site E3384_15855 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain E3384_15855 IPR000544 Octanoyltransferase E3384_15860 IPR005119 LysR, substrate-binding E3384_15860 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_15860 IPR036390 Winged helix DNA-binding domain superfamily E3384_15860 IPR000847 Transcription regulator HTH, LysR E3384_15865 IPR031691 Lipoyl synthase, N-terminal E3384_15865 IPR013785 Aldolase-type TIM barrel E3384_15865 IPR006638 Elp3/MiaB/NifB E3384_15865 IPR007197 Radical SAM E3384_15865 IPR003698 Lipoyl synthase E3384_15870 IPR003369 Sec-independent protein translocase protein TatA/B/E E3384_15870 IPR024905 Sec-independent protein translocase protein TatE E3384_15870 IPR006312 Sec-independent protein translocase protein TatA/E E3384_15875 IPR003010 Carbon-nitrogen hydrolase E3384_15875 IPR036526 Carbon-nitrogen hydrolase superfamily E3384_15875 IPR001110 Uncharacterised protein family UPF0012, conserved site E3384_15880 IPR003691 Putative fluoride ion transporter CrcB E3384_15885 IPR002059 Cold-shock protein, DNA-binding E3384_15885 IPR012340 Nucleic acid-binding, OB-fold E3384_15885 IPR011129 Cold shock domain E3384_15885 IPR019844 Cold-shock (CSD) domain E3384_15885 IPR012156 Cold shock, CspA E3384_15890 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel E3384_15890 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP E3384_15895 IPR004669 C4-dicarboxylate anaerobic carrier E3384_15895 IPR018385 C4-dicarboxylate anaerobic carrier-like E3384_15900 IPR011006 CheY-like superfamily E3384_15900 IPR024187 Signal transduction response regulator, citrate/malate metabolism E3384_15900 IPR001789 Signal transduction response regulator, receiver domain E3384_15900 IPR028141 Transcriptional regulator E3384_15905 IPR013767 PAS fold E3384_15905 IPR003594 Histidine kinase/HSP90-like ATPase E3384_15905 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_15905 IPR005467 Histidine kinase domain E3384_15905 IPR035965 PAS domain superfamily E3384_15905 IPR000014 PAS domain E3384_15905 IPR039506 SpoOB, alpha-helical domain E3384_15905 IPR029151 Periplasmic sensor-like domain superfamily E3384_15905 IPR033463 Single cache domain 3 E3384_15905 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB E3384_15905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_15910 IPR013166 Citrate lyase ligase, C-terminal E3384_15910 IPR005216 Citrate lyase ligase E3384_15910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_15910 IPR004821 Cytidyltransferase-like domain E3384_15910 IPR000182 GNAT domain E3384_15910 IPR016181 Acyl-CoA N-acyltransferase E3384_15915 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein E3384_15915 IPR006495 Citrate lyase acyl carrier protein CitD E3384_15920 IPR011206 Citrate lyase beta subunit-like E3384_15920 IPR005000 HpcH/HpaI aldolase/citrate lyase domain E3384_15920 IPR006475 Citrate lyase, beta subunit, bacteria E3384_15920 IPR040442 Pyruvate kinase-like domain superfamily E3384_15920 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_15925 IPR037171 NagB/RpiA transferase-like E3384_15925 IPR006472 Citrate lyase, alpha subunit E3384_15930 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E3384_15935 IPR002736 Triphosphoribosyl-dephospho-CoA protein E3384_15935 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG E3384_15940 IPR030676 Citrate carrier CitT-related E3384_15940 IPR001898 Solute carrier family 13 E3384_15945 IPR039378 Ribonuclease T2, prokaryotic E3384_15945 IPR033130 Ribonuclease T2, His active site 2 E3384_15945 IPR018188 Ribonuclease T2, His active site 1 E3384_15945 IPR036430 Ribonuclease T2-like superfamily E3384_15945 IPR001568 Ribonuclease T2-like E3384_15950 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily E3384_15950 IPR028625 Regulator of nucleoside diphosphate kinase E3384_15950 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain E3384_15950 IPR023459 Transcription elongation factor GreA/GreB family E3384_15950 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal E3384_15955 IPR013154 Alcohol dehydrogenase, N-terminal E3384_15955 IPR036291 NAD(P)-binding domain superfamily E3384_15955 IPR011032 GroES-like superfamily E3384_15955 IPR013149 Alcohol dehydrogenase, C-terminal E3384_15955 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E3384_15955 IPR027399 Alcohol dehydrogenase GroES-associated E3384_15960 IPR006016 UspA E3384_15960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_15960 IPR006015 Universal stress protein A family E3384_15970 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_15970 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_15970 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_15975 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site E3384_15975 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_15975 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_15975 IPR006656 Molybdopterin oxidoreductase E3384_15975 IPR006657 Molybdopterin dinucleotide-binding domain E3384_15975 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_15985 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_15985 IPR002109 Glutaredoxin E3384_15985 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site E3384_15985 IPR012336 Thioredoxin-like fold E3384_15985 IPR012081 Alkyl hydroperoxide reductase subunit F E3384_15985 IPR036249 Thioredoxin-like superfamily E3384_15985 IPR023753 FAD/NAD(P)-binding domain E3384_15990 IPR019479 Peroxiredoxin, C-terminal E3384_15990 IPR024706 Peroxiredoxin, AhpC-type E3384_15990 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant E3384_15990 IPR017559 Alkyl hydroperoxide reductase subunit C E3384_15990 IPR013766 Thioredoxin domain E3384_15990 IPR036249 Thioredoxin-like superfamily E3384_15995 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily E3384_15995 IPR012336 Thioredoxin-like fold E3384_15995 IPR033954 Disulphide bond isomerase, DsbC/G E3384_15995 IPR036249 Thioredoxin-like superfamily E3384_16005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_16005 IPR002500 Phosphoadenosine phosphosulphate reductase E3384_16005 IPR021845 Protein of unknown function DUF3440 E3384_16010 IPR003115 ParB/Sulfiredoxin E3384_16010 IPR036086 ParB/Sulfiredoxin superfamily E3384_16015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_16015 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_16015 IPR015424 Pyridoxal phosphate-dependent transferase E3384_16015 IPR004839 Aminotransferase, class I/classII E3384_16020 IPR018211 Alcohol dehydrogenase, iron-type, conserved site E3384_16020 IPR016205 Glycerol dehydrogenase E3384_16020 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA E3384_16025 IPR007423 Selenoprotein, putative E3384_16030 IPR025299 CstA, C-terminal domain E3384_16030 IPR003706 CstA, N-terminal domain E3384_16035 IPR006683 Thioesterase domain E3384_16035 IPR026576 Proofreading thioesterase EntH E3384_16035 IPR003736 Phenylacetic acid degradation-related domain E3384_16035 IPR029069 HotDog domain superfamily E3384_16040 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_16040 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase E3384_16040 IPR036291 NAD(P)-binding domain superfamily E3384_16040 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_16045 IPR036736 ACP-like superfamily E3384_16045 IPR000868 Isochorismatase-like E3384_16045 IPR036380 Isochorismatase-like superfamily E3384_16045 IPR009081 Phosphopantetheine binding ACP domain E3384_16045 IPR016291 Isochorismatase E3384_16050 IPR020845 AMP-binding, conserved site E3384_16050 IPR000873 AMP-dependent synthetase/ligase E3384_16050 IPR025110 AMP-binding enzyme, C-terminal domain E3384_16050 IPR042099 AMP-dependent synthetase-like superfamily E3384_16050 IPR011963 2,3-dihydroxybenzoate-AMP ligase E3384_16055 IPR015890 Chorismate-utilising enzyme, C-terminal E3384_16055 IPR004561 Isochorismate synthase E3384_16055 IPR005801 ADC synthase E3384_16060 IPR002491 ABC transporter periplasmic binding domain E3384_16065 IPR023722 Enterobactin exporter, EntS E3384_16065 IPR020846 Major facilitator superfamily domain E3384_16065 IPR036259 MFS transporter superfamily E3384_16065 IPR010290 Transmembrane secretion effector E3384_16070 IPR000522 ABC transporter, permease protein, BtuC-like E3384_16070 IPR037294 ABC transporter, BtuC-like E3384_16075 IPR037294 ABC transporter, BtuC-like E3384_16075 IPR000522 ABC transporter, permease protein, BtuC-like E3384_16080 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16080 IPR017871 ABC transporter, conserved site E3384_16080 IPR003593 AAA+ ATPase domain E3384_16080 IPR003439 ABC transporter-like E3384_16085 IPR003856 Polysaccharide chain length determinant N-terminal domain E3384_16090 IPR020802 Polyketide synthase, thioesterase domain E3384_16090 IPR006162 Phosphopantetheine attachment site E3384_16090 IPR009081 Phosphopantetheine binding ACP domain E3384_16090 IPR020806 Polyketide synthase, phosphopantetheine-binding domain E3384_16090 IPR001242 Condensation domain E3384_16090 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily E3384_16090 IPR042099 AMP-dependent synthetase-like superfamily E3384_16090 IPR000873 AMP-dependent synthetase/ligase E3384_16090 IPR020845 AMP-binding, conserved site E3384_16090 IPR025110 AMP-binding enzyme, C-terminal domain E3384_16090 IPR036736 ACP-like superfamily E3384_16090 IPR029058 Alpha/Beta hydrolase fold E3384_16090 IPR010071 Amino acid adenylation domain E3384_16090 IPR001031 Thioesterase E3384_16095 IPR005153 MbtH-like domain E3384_16095 IPR037407 MbtH-like protein E3384_16095 IPR038020 MbtH-like domain superfamily E3384_16100 IPR014756 Immunoglobulin E-set E3384_16100 IPR029058 Alpha/Beta hydrolase fold E3384_16100 IPR021764 Enterochelin esterase, N-terminal E3384_16100 IPR000801 Putative esterase E3384_16100 IPR013783 Immunoglobulin-like fold E3384_16105 IPR010105 TonB-dependent siderophore receptor E3384_16105 IPR039426 Vitamin B12 transporter BtuB-like E3384_16105 IPR010917 TonB-dependent receptor, conserved site E3384_16105 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily E3384_16105 IPR012910 TonB-dependent receptor, plug domain E3384_16105 IPR010916 TonB box, conserved site E3384_16105 IPR000531 TonB-dependent receptor-like, beta-barrel E3384_16105 IPR037066 TonB-dependent receptor, plug domain superfamily E3384_16110 IPR037143 4'-phosphopantetheinyl transferase domain superfamily E3384_16110 IPR008278 4'-phosphopantetheinyl transferase domain E3384_16110 IPR003542 Enterobactin synthetase-like, component D E3384_16110 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain E3384_16115 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain E3384_16115 IPR006336 Glutamate--cysteine ligase, GCS2 E3384_16115 IPR011793 Putative glutamate--cysteine ligase YbdK E3384_16120 IPR010590 Protein of unknown function DUF1158 E3384_16125 IPR020449 Transcription regulator HTH, AraC- type E3384_16125 IPR018062 HTH domain AraC-type, conserved site E3384_16125 IPR018060 DNA binding HTH domain, AraC-type E3384_16125 IPR009057 Homeobox-like domain superfamily E3384_16130 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E3384_16130 IPR032551 HTH-type transcriptional repressor, C-terminal E3384_16130 IPR009057 Homeobox-like domain superfamily E3384_16130 IPR001647 DNA-binding HTH domain, TetR-type E3384_16130 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_16135 IPR038056 YjbR-like superfamily E3384_16135 IPR007351 Uncharacterised protein YjbR E3384_16140 IPR000415 Nitroreductase-like E3384_16140 IPR029479 Nitroreductase E3384_16140 IPR033878 Nitroreductase NfsB-like E3384_16150 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily E3384_16150 IPR004720 Phosphotransferase system, sorbose subfamily IIB component E3384_16160 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component E3384_16170 IPR035490 GlmS/FrlB, SIS domain 2 E3384_16170 IPR001347 Sugar isomerase (SIS) E3384_16170 IPR035488 Fructosamine deglycase FrlB, SIS domain 1 E3384_16170 IPR024713 Fructosamine deglycase FrlB E3384_16175 IPR003593 AAA+ ATPase domain E3384_16175 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16175 IPR011608 PRD domain E3384_16175 IPR004701 Phosphotransferase system, mannose-type IIA component E3384_16175 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily E3384_16175 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_16175 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_16175 IPR001550 Transcription antiterminator, conserved site E3384_16175 IPR036390 Winged helix DNA-binding domain superfamily E3384_16175 IPR033887 PTS system mannose/sorbose specific IIA subunit E3384_16175 IPR036634 PRD domain superfamily E3384_16180 IPR005546 Autotransporter beta-domain E3384_16180 IPR036709 Autotransporter beta-domain superfamily E3384_16180 IPR001087 GDSL lipase/esterase E3384_16180 IPR017186 Lipase, autotransporter EstA E3384_16180 IPR008265 Lipase, GDSL, active site E3384_16180 IPR036514 SGNH hydrolase superfamily E3384_16180 IPR006315 Outer membrane autotransporter barrel E3384_16185 IPR011066 Mechanosensitive ion channel MscS, C-terminal E3384_16185 IPR010920 LSM domain superfamily E3384_16185 IPR006685 Mechanosensitive ion channel MscS E3384_16185 IPR030192 Miniconductance mechanosensitive channel YbdG E3384_16190 IPR004841 Amino acid permease/ SLC12A domain E3384_16190 IPR004840 Amino acid permease, conserved site E3384_16200 IPR007339 Inner membrane protein RclC-like E3384_16200 IPR016865 Inner membrane protein RclC E3384_16205 IPR036275 YdgH-like superfamily E3384_16205 IPR010854 Domain of unknown function DUF1471 E3384_16205 IPR025543 Dodecin-like E3384_16210 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3384_16210 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_16210 IPR023753 FAD/NAD(P)-binding domain E3384_16210 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site E3384_16210 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I E3384_16210 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily E3384_16215 IPR032783 AraC-type transcription regulator, ligand-binding domain E3384_16215 IPR020449 Transcription regulator HTH, AraC- type E3384_16215 IPR011051 RmlC-like cupin domain superfamily E3384_16215 IPR018060 DNA binding HTH domain, AraC-type E3384_16215 IPR009057 Homeobox-like domain superfamily E3384_16220 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA E3384_16220 IPR001036 Acriflavin resistance protein E3384_16220 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains E3384_16225 IPR003594 Histidine kinase/HSP90-like ATPase E3384_16225 IPR005467 Histidine kinase domain E3384_16225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_16225 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_16225 IPR006290 Heavy metal sensor kinase E3384_16225 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_16225 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_16225 IPR003660 HAMP domain E3384_16235 IPR016480 Glucose translocase, bactoprenol-linked E3384_16235 IPR007267 GtrA-like protein E3384_16240 IPR001173 Glycosyltransferase 2-like E3384_16240 IPR029044 Nucleotide-diphospho-sugar transferases E3384_16265 IPR001173 Glycosyltransferase 2-like E3384_16265 IPR029044 Nucleotide-diphospho-sugar transferases E3384_16270 IPR016480 Glucose translocase, bactoprenol-linked E3384_16270 IPR007267 GtrA-like protein E3384_16285 IPR010998 Integrase/recombinase, N-terminal E3384_16285 IPR002104 Integrase, catalytic domain E3384_16285 IPR013762 Integrase-like, catalytic domain superfamily E3384_16285 IPR011010 DNA breaking-rejoining enzyme, catalytic core E3384_16300 IPR016032 Signal transduction response regulator, C-terminal effector E3384_16300 IPR000792 Transcription regulator LuxR, C-terminal E3384_16300 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_16315 IPR016032 Signal transduction response regulator, C-terminal effector E3384_16315 IPR001789 Signal transduction response regulator, receiver domain E3384_16315 IPR011006 CheY-like superfamily E3384_16315 IPR000792 Transcription regulator LuxR, C-terminal E3384_16320 IPR008966 Adhesion domain superfamily E3384_16320 IPR000259 Fimbrial-type adhesion domain E3384_16320 IPR036937 Fimbrial-type adhesion domain superfamily E3384_16325 IPR000259 Fimbrial-type adhesion domain E3384_16325 IPR008966 Adhesion domain superfamily E3384_16325 IPR036937 Fimbrial-type adhesion domain superfamily E3384_16330 IPR037224 PapC, N-terminal domain superfamily E3384_16330 IPR025949 PapC-like, C-terminal domain E3384_16330 IPR000015 Outer membrane usher protein E3384_16330 IPR018030 Fimbrial membrane usher, conserved site E3384_16330 IPR042186 Outer membrane usher protein FimD, plug domain E3384_16330 IPR025885 PapC, N-terminal domain E3384_16335 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_16335 IPR016147 Pili assembly chaperone, N-terminal E3384_16335 IPR013783 Immunoglobulin-like fold E3384_16335 IPR018046 Pili assembly chaperone, conserved site E3384_16335 IPR008962 PapD-like superfamily E3384_16335 IPR016148 Pili assembly chaperone, C-terminal E3384_16335 IPR001829 Pili assembly chaperone, bacterial E3384_16340 IPR036937 Fimbrial-type adhesion domain superfamily E3384_16340 IPR008966 Adhesion domain superfamily E3384_16345 IPR000259 Fimbrial-type adhesion domain E3384_16345 IPR008966 Adhesion domain superfamily E3384_16345 IPR036937 Fimbrial-type adhesion domain superfamily E3384_16355 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E3384_16355 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site E3384_16355 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E3384_16355 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase E3384_16355 IPR036291 NAD(P)-binding domain superfamily E3384_16360 IPR036986 RNA-binding S4 domain superfamily E3384_16360 IPR002942 RNA-binding S4 domain E3384_16365 IPR007404 LexA-binding, inner membrane-associated putative hydrolase E3384_16380 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR E3384_16380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_16380 IPR032678 tRNA synthetases class I, catalytic domain E3384_16380 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase E3384_16380 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E3384_16380 IPR015803 Cysteine-tRNA ligase E3384_16385 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase E3384_16385 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site E3384_16385 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain E3384_16385 IPR029000 Cyclophilin-like domain superfamily E3384_16390 IPR010138 UDP-2,3-diacylglucosamine hydrolase E3384_16390 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type E3384_16395 IPR035893 PurE domain superfamily E3384_16395 IPR033747 Class I PurE E3384_16395 IPR024694 PurE, prokaryotic type E3384_16395 IPR000031 PurE domain E3384_16400 IPR016185 Pre-ATP-grasp domain superfamily E3384_16400 IPR013815 ATP-grasp fold, subdomain 1 E3384_16400 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit E3384_16400 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type E3384_16400 IPR011761 ATP-grasp fold E3384_16400 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain E3384_16400 IPR011054 Rudiment single hybrid motif E3384_16405 IPR036393 Acetylglutamate kinase-like superfamily E3384_16405 IPR001048 Aspartate/glutamate/uridylate kinase E3384_16405 IPR003964 Carbamate kinase E3384_16410 IPR021530 Protein of unknown function DUF2877 E3384_16415 IPR024033 Uncharacterised domain superfamily, YlbE E3384_16415 IPR009499 Protein of unknown function DUF1116 E3384_16420 IPR005811 ATP-citrate lyase/succinyl-CoA ligase E3384_16420 IPR003781 CoA-binding E3384_16420 IPR016102 Succinyl-CoA synthetase-like E3384_16425 IPR017590 Ureidoglycolate dehydrogenase E3384_16425 IPR003767 Malate/L-lactate dehydrogenase-like E3384_16425 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily E3384_16430 IPR010158 Amidase, carbamoylase-type E3384_16430 IPR017591 Allantoate amidohydrolase E3384_16430 IPR036264 Bacterial exopeptidase dimerisation domain E3384_16430 IPR002933 Peptidase M20 E3384_16435 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein E3384_16435 IPR014710 RmlC-like jelly roll fold E3384_16435 IPR008579 Domain of unknown function DUF861, cupin-3 E3384_16435 IPR013096 Cupin 2, conserved barrel E3384_16435 IPR011051 RmlC-like cupin domain superfamily E3384_16440 IPR018197 Glycerate kinase, restriction-enzyme-like fold E3384_16440 IPR004381 Glycerate kinase E3384_16440 IPR018193 Glycerate kinase, flavodoxin-like fold E3384_16440 IPR036129 Glycerate kinase superfamily E3384_16445 IPR006043 Xanthine/uracil/vitamin C permease E3384_16450 IPR006680 Amidohydrolase-related E3384_16450 IPR011059 Metal-dependent hydrolase, composite domain superfamily E3384_16450 IPR032466 Metal-dependent hydrolase E3384_16450 IPR017593 Allantoinase E3384_16455 IPR012681 Nucleobase cation symporter-1, NCS1 E3384_16455 IPR001248 Purine-cytosine permease E3384_16455 IPR038271 Purine-cytosine permease superfamily E3384_16465 IPR036291 NAD(P)-binding domain superfamily E3384_16465 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain E3384_16465 IPR006398 2-hydroxy-3-oxopropionate reductase E3384_16465 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site E3384_16465 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_16465 IPR015815 3-hydroxyisobutyrate dehydrogenase-related E3384_16465 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_16465 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding E3384_16470 IPR036237 Xylose isomerase-like superfamily E3384_16470 IPR013022 Xylose isomerase-like, TIM barrel domain E3384_16470 IPR026040 Hydroxypyruvate isomerase-like E3384_16470 IPR017643 Hydroxypyruvate isomerase E3384_16475 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E3384_16475 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_16475 IPR006397 Glyoxylate carboligase E3384_16475 IPR029061 Thiamin diphosphate-binding fold E3384_16475 IPR012000 Thiamine pyrophosphate enzyme, central domain E3384_16475 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain E3384_16480 IPR029016 GAF-like domain superfamily E3384_16480 IPR036390 Winged helix DNA-binding domain superfamily E3384_16480 IPR014757 Transcription regulator IclR, C-terminal E3384_16480 IPR005471 Transcription regulator IclR, N-terminal E3384_16480 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_16485 IPR011051 RmlC-like cupin domain superfamily E3384_16485 IPR007247 Ureidoglycolate lyase E3384_16485 IPR024060 Ureidoglycolate lyase domain superfamily E3384_16485 IPR023525 Ureidoglycolate lyase, bacterial E3384_16490 IPR036390 Winged helix DNA-binding domain superfamily E3384_16490 IPR000847 Transcription regulator HTH, LysR E3384_16490 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_16490 IPR005119 LysR, substrate-binding E3384_16495 IPR001763 Rhodanese-like domain E3384_16495 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase E3384_16495 IPR036873 Rhodanese-like domain superfamily E3384_16500 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_16500 IPR035906 MetI-like superfamily E3384_16505 IPR018449 NIL domain E3384_16505 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16505 IPR003593 AAA+ ATPase domain E3384_16505 IPR026253 Methionine import ATP-binding protein MetN E3384_16505 IPR003439 ABC transporter-like E3384_16505 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain E3384_16505 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal E3384_16505 IPR017871 ABC transporter, conserved site E3384_16510 IPR004872 Lipoprotein NlpA family E3384_16520 IPR038766 Membrane component of ABC transporter, predicted E3384_16525 IPR003593 AAA+ ATPase domain E3384_16525 IPR003439 ABC transporter-like E3384_16525 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16525 IPR017871 ABC transporter, conserved site E3384_16530 IPR008265 Lipase, GDSL, active site E3384_16530 IPR013830 SGNH hydrolase-type esterase domain E3384_16530 IPR036514 SGNH hydrolase superfamily E3384_16535 IPR036291 NAD(P)-binding domain superfamily E3384_16535 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_16535 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_16540 IPR013766 Thioredoxin domain E3384_16540 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_16540 IPR036249 Thioredoxin-like superfamily E3384_16545 IPR005226 UPF0014 family E3384_16550 IPR003439 ABC transporter-like E3384_16550 IPR017871 ABC transporter, conserved site E3384_16550 IPR003593 AAA+ ATPase domain E3384_16550 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16555 IPR001972 Stomatin family E3384_16555 IPR032435 Band 7, C-terminal extension E3384_16555 IPR001107 Band 7 domain E3384_16555 IPR036013 Band 7/SPFH domain superfamily E3384_16555 IPR018080 Band 7/stomatin-like, conserved site E3384_16560 IPR002810 NfeD-like, C-terminal domain E3384_16565 IPR009061 Putative DNA-binding domain superfamily E3384_16565 IPR000551 MerR-type HTH domain E3384_16565 IPR011789 Cu(I)-responsive transcriptional regulator E3384_16570 IPR008250 P-type ATPase, A domain superfamily E3384_16570 IPR023298 P-type ATPase, transmembrane domain superfamily E3384_16570 IPR018303 P-type ATPase, phosphorylation site E3384_16570 IPR017969 Heavy-metal-associated, conserved site E3384_16570 IPR023299 P-type ATPase, cytoplasmic domain N E3384_16570 IPR006121 Heavy metal-associated domain, HMA E3384_16570 IPR036163 Heavy metal-associated domain superfamily E3384_16570 IPR027256 P-type ATPase, subfamily IB E3384_16570 IPR001757 P-type ATPase E3384_16570 IPR036412 HAD-like superfamily E3384_16570 IPR023214 HAD superfamily E3384_16580 IPR002816 TraB family E3384_16585 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC E3384_16585 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily E3384_16585 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain E3384_16590 IPR006146 5'-Nucleotidase, conserved site E3384_16590 IPR006179 5'-Nucleotidase/apyrase E3384_16590 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E3384_16590 IPR029052 Metallo-dependent phosphatase-like E3384_16590 IPR008334 5'-Nucleotidase, C-terminal E3384_16590 IPR036907 5'-Nucleotidase, C-terminal domain superfamily E3384_16595 IPR011701 Major facilitator superfamily E3384_16595 IPR036259 MFS transporter superfamily E3384_16595 IPR020846 Major facilitator superfamily domain E3384_16600 IPR003148 Regulator of K+ conductance, N-terminal E3384_16600 IPR036291 NAD(P)-binding domain superfamily E3384_16600 IPR038770 Sodium/solute symporter superfamily E3384_16600 IPR004771 K+/H+ exchanger E3384_16600 IPR006153 Cation/H+ exchanger E3384_16605 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_16605 IPR011611 Carbohydrate kinase PfkB E3384_16605 IPR029056 Ribokinase-like E3384_16610 IPR029058 Alpha/Beta hydrolase fold E3384_16610 IPR033140 Lipase, GDXG, putative serine active site E3384_16610 IPR013094 Alpha/beta hydrolase fold-3 E3384_16610 IPR023508 Acetyl esterase E3384_16615 IPR033644 Ferrochelatase, C-terminal E3384_16615 IPR019772 Ferrochelatase, active site E3384_16615 IPR033659 Ferrochelatase, N-terminal E3384_16615 IPR001015 Ferrochelatase E3384_16620 IPR007862 Adenylate kinase, active site lid domain E3384_16620 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16620 IPR006259 Adenylate kinase subfamily E3384_16620 IPR033690 Adenylate kinase, conserved site E3384_16620 IPR000850 Adenylate kinase/UMP-CMP kinase E3384_16625 IPR020575 Heat shock protein Hsp90, N-terminal E3384_16625 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_16625 IPR019805 Heat shock protein Hsp90, conserved site E3384_16625 IPR037196 HSP90, C-terminal domain E3384_16625 IPR001404 Heat shock protein Hsp90 family E3384_16625 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_16625 IPR003594 Histidine kinase/HSP90-like ATPase E3384_16630 IPR034137 RecR, TOPRIM domain E3384_16630 IPR023627 Recombination protein RecR E3384_16630 IPR023628 Recombination protein RecR, C4-type zinc finger E3384_16630 IPR015967 Recombination protein RecR, conserved site E3384_16630 IPR006171 TOPRIM domain E3384_16630 IPR000093 DNA recombination protein RecR E3384_16635 IPR004401 Nucleoid-associated protein YbaB/EbfC family E3384_16635 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily E3384_16640 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16640 IPR021029 DNA polymerase III, tau subunit, domain V E3384_16640 IPR001270 ClpA/B family E3384_16640 IPR012763 DNA polymerase III, subunit gamma/ tau E3384_16640 IPR022754 DNA polymerase III, gamma subunit, domain III E3384_16640 IPR003593 AAA+ ATPase domain E3384_16640 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal E3384_16640 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily E3384_16640 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV E3384_16645 IPR029057 Phosphoribosyltransferase-like E3384_16645 IPR005764 Adenine phosphoribosyl transferase E3384_16645 IPR000836 Phosphoribosyltransferase domain E3384_16650 IPR007401 Protein of unknown function DUF454 E3384_16655 IPR010890 Primosomal replication PriB/PriC E3384_16655 IPR038338 PriB/PriC superfamily E3384_16660 IPR019630 Protein of unknown function DUF2496, YbaM-related E3384_16665 IPR006842 Transposase (putative), YhgA-like E3384_16665 IPR010106 Recombination-promoting nuclease RpnA E3384_16670 IPR023298 P-type ATPase, transmembrane domain superfamily E3384_16670 IPR010920 LSM domain superfamily E3384_16670 IPR006685 Mechanosensitive ion channel MscS E3384_16670 IPR011066 Mechanosensitive ion channel MscS, C-terminal E3384_16670 IPR024393 Mechanosensitive ion channel MscS, porin domain E3384_16670 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 E3384_16670 IPR023408 Mechanosensitive ion channel MscS domain superfamily E3384_16670 IPR006686 Mechanosensitive ion channel MscS, conserved site E3384_16670 IPR025692 Mechanosensitive ion channel inner membrane domain 1 E3384_16675 IPR013572 Transcription regulator MAATS, C-terminal E3384_16675 IPR023772 DNA-binding HTH domain, TetR-type, conserved site E3384_16675 IPR009057 Homeobox-like domain superfamily E3384_16675 IPR001647 DNA-binding HTH domain, TetR-type E3384_16675 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_16680 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain E3384_16680 IPR006143 RND efflux pump, membrane fusion protein E3384_16685 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 E3384_16685 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains E3384_16685 IPR001036 Acriflavin resistance protein E3384_16690 IPR019693 Biofilm formation regulator YbaJ E3384_16695 IPR007985 Haemolysin expression modulating, HHA E3384_16695 IPR036666 HHA superfamily E3384_16700 IPR018357 Hexapeptide transferase, conserved site E3384_16700 IPR024688 Maltose/galactoside acetyltransferase E3384_16700 IPR001451 Hexapeptide repeat E3384_16700 IPR011004 Trimeric LpxA-like superfamily E3384_16705 IPR019713 Inner membrane protein YlaC E3384_16710 IPR035977 Ribosomal protein L36 superfamily E3384_16710 IPR000473 Ribosomal protein L36 E3384_16715 IPR034704 L28p-like E3384_16715 IPR002150 Ribosomal protein L31 E3384_16715 IPR027493 Ribosomal protein L31 type B E3384_16715 IPR042105 Ribosomal protein L31 superfamily E3384_16720 IPR035919 EAL domain superfamily E3384_16720 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain E3384_16720 IPR001633 EAL domain E3384_16730 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain E3384_16730 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding E3384_16730 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_16735 IPR039366 YscW/ExsB E3384_16740 IPR003703 Acyl-CoA thioesterase E3384_16740 IPR029069 HotDog domain superfamily E3384_16745 IPR018047 Ammonium transporter, conserved site E3384_16745 IPR024041 Ammonium transporter AmtB-like domain E3384_16745 IPR029020 Ammonium/urea transporter E3384_16745 IPR001905 Ammonium transporter E3384_16750 IPR002187 Nitrogen regulatory protein PII E3384_16750 IPR017918 Nitrogen regulatory protein PII, conserved site E3384_16750 IPR011322 Nitrogen regulatory PII-like, alpha/beta E3384_16750 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal E3384_16750 IPR002332 Nitrogen regulatory protein P-II, urydylation site E3384_16755 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16755 IPR011527 ABC transporter type 1, transmembrane domain E3384_16755 IPR017871 ABC transporter, conserved site E3384_16755 IPR003439 ABC transporter-like E3384_16755 IPR036640 ABC transporter type 1, transmembrane domain superfamily E3384_16755 IPR039421 Type I protein exporter E3384_16755 IPR003593 AAA+ ATPase domain E3384_16760 IPR036640 ABC transporter type 1, transmembrane domain superfamily E3384_16760 IPR017871 ABC transporter, conserved site E3384_16760 IPR003439 ABC transporter-like E3384_16760 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16760 IPR039421 Type I protein exporter E3384_16760 IPR011527 ABC transporter type 1, transmembrane domain E3384_16760 IPR003593 AAA+ ATPase domain E3384_16765 IPR011008 Dimeric alpha-beta barrel E3384_16765 IPR011991 ArsR-like helix-turn-helix domain E3384_16765 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_16765 IPR019888 Transcription regulator AsnC-type E3384_16765 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain E3384_16765 IPR036390 Winged helix DNA-binding domain superfamily E3384_16765 IPR000485 AsnC-type HTH domain E3384_16765 IPR019885 Transcription regulator HTH, AsnC-type, conserved site E3384_16775 IPR006379 HAD-superfamily hydrolase, subfamily IIB E3384_16775 IPR023938 HMP-PP phosphatase E3384_16775 IPR023214 HAD superfamily E3384_16775 IPR036412 HAD-like superfamily E3384_16775 IPR000150 Cof family E3384_16780 IPR000914 Solute-binding protein family 5 domain E3384_16780 IPR039424 Solute-binding protein family 5 E3384_16780 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain E3384_16785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_16785 IPR018317 Queuosine biosynthesis protein QueC E3384_16790 IPR029069 HotDog domain superfamily E3384_16790 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family E3384_16795 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 E3384_16795 IPR004509 Competence protein ComEA, helix-hairpin-helix domain E3384_16795 IPR010994 RuvA domain 2-like E3384_16800 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type E3384_16800 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site E3384_16800 IPR027304 Trigger factor/SurA domain superfamily E3384_16805 IPR000119 Histone-like DNA-binding protein E3384_16805 IPR020816 Histone-like DNA-binding protein, conserved site E3384_16805 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily E3384_16810 IPR027065 Lon protease E3384_16810 IPR008269 Peptidase S16, Lon proteolytic domain E3384_16810 IPR008268 Peptidase S16, active site E3384_16810 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16810 IPR015947 PUA-like superfamily E3384_16810 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_16810 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_16810 IPR003593 AAA+ ATPase domain E3384_16810 IPR003959 ATPase, AAA-type, core E3384_16810 IPR027543 Lon protease, bacterial E3384_16810 IPR003111 Lon, substrate-binding domain E3384_16810 IPR004815 Lon protease, bacterial/eukaryotic-type E3384_16815 IPR004487 Clp protease, ATP-binding subunit ClpX E3384_16815 IPR019489 Clp ATPase, C-terminal E3384_16815 IPR003959 ATPase, AAA-type, core E3384_16815 IPR003593 AAA+ ATPase domain E3384_16815 IPR010603 Zinc finger, ClpX C4-type E3384_16815 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16815 IPR038366 Zinc finger, ClpX C4-type superfamily E3384_16820 IPR033135 ClpP, histidine active site E3384_16820 IPR001907 ATP-dependent Clp protease proteolytic subunit E3384_16820 IPR018215 ClpP, Ser active site E3384_16820 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA E3384_16820 IPR029045 ClpP/crotonase-like domain superfamily E3384_16825 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain E3384_16825 IPR005215 Trigger factor E3384_16825 IPR027304 Trigger factor/SurA domain superfamily E3384_16825 IPR008880 Trigger factor, C-terminal E3384_16825 IPR008881 Trigger factor, ribosome-binding, bacterial E3384_16825 IPR036611 Trigger factor ribosome-binding domain superfamily E3384_16825 IPR037041 Trigger factor, C-terminal domain superfamily E3384_16835 IPR036065 BolA-like superfamily E3384_16835 IPR002634 BolA protein E3384_16840 IPR005619 Uncharacterised protein family, YajG E3384_16840 IPR012640 Membrane lipoprotein, lipid attachment site E3384_16845 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 E3384_16845 IPR011701 Major facilitator superfamily E3384_16845 IPR020846 Major facilitator superfamily domain E3384_16845 IPR036259 MFS transporter superfamily E3384_16850 IPR010514 COX aromatic rich motif E3384_16850 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain E3384_16850 IPR008972 Cupredoxin E3384_16850 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain E3384_16850 IPR002429 Cytochrome c oxidase subunit II-like C-terminal E3384_16850 IPR006333 Cytochrome o ubiquinol oxidase subunit II E3384_16850 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily E3384_16855 IPR000883 Cytochrome c oxidase subunit I E3384_16855 IPR014207 Cytochrome o ubiquinol oxidase, subunit I E3384_16855 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site E3384_16855 IPR023616 Cytochrome c oxidase-like, subunit I domain E3384_16855 IPR036927 Cytochrome c oxidase-like, subunit I superfamily E3384_16860 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle E3384_16860 IPR014206 Cytochrome o ubiquinol oxidase, subunit III E3384_16860 IPR033946 Ubiquinol oxidase subunit III domain E3384_16860 IPR024791 Cytochrome c oxidase subunit III E3384_16860 IPR035973 Cytochrome c oxidase subunit III-like superfamily E3384_16860 IPR000298 Cytochrome c oxidase subunit III-like E3384_16865 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes E3384_16865 IPR014210 Cytochrome o ubiquinol oxidase subunit IV E3384_16870 IPR030470 UbiA prenyltransferase conserved site E3384_16870 IPR000537 UbiA prenyltransferase family E3384_16870 IPR006369 Protohaem IX farnesyltransferase E3384_16885 IPR011701 Major facilitator superfamily E3384_16885 IPR036259 MFS transporter superfamily E3384_16885 IPR020846 Major facilitator superfamily domain E3384_16890 IPR035570 UPF0234, N-terminal E3384_16890 IPR036183 YajQ-like superfamily E3384_16890 IPR007551 Protein of unknown function DUF520 E3384_16890 IPR035571 UPF0234-like, C-terminal E3384_16895 IPR036291 NAD(P)-binding domain superfamily E3384_16895 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_16895 IPR013332 Ketopantoate reductase, N-terminal domain E3384_16895 IPR013752 Ketopantoate reductase, C-terminal domain E3384_16895 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_16895 IPR003710 Ketopantoate reductase ApbA/PanE E3384_16900 IPR029062 Class I glutamine amidotransferase-like E3384_16900 IPR002818 DJ-1/PfpI E3384_16900 IPR006287 Protein/nucleic acid deglycase DJ-1 E3384_16905 IPR006439 HAD hydrolase, subfamily IA E3384_16905 IPR023214 HAD superfamily E3384_16905 IPR036412 HAD-like superfamily E3384_16905 IPR023198 Phosphoglycolate phosphatase-like, domain 2 E3384_16905 IPR006323 Phosphonoacetaldehyde hydrolase E3384_16910 IPR000192 Aminotransferase class V domain E3384_16910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_16910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_16910 IPR015424 Pyridoxal phosphate-dependent transferase E3384_16910 IPR012703 2-aminoethylphosphonate--pyruvate transaminase E3384_16910 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase E3384_16915 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_16915 IPR036390 Winged helix DNA-binding domain superfamily E3384_16915 IPR000524 Transcription regulator HTH, GntR E3384_16915 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily E3384_16915 IPR011663 UbiC transcription regulator-associated E3384_16915 IPR017722 Phosphonate utilization transcriptional regulator PhnR E3384_16920 IPR006059 Bacterial extracellular solute-binding protein E3384_16920 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter E3384_16925 IPR003439 ABC transporter-like E3384_16925 IPR017662 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT E3384_16925 IPR017871 ABC transporter, conserved site E3384_16925 IPR003593 AAA+ ATPase domain E3384_16925 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_16925 IPR008995 Molybdate/tungstate binding, C-terminal E3384_16925 IPR013611 Transport-associated OB, type 2 E3384_16930 IPR035906 MetI-like superfamily E3384_16930 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_16930 IPR017636 2-aminoethylphosphonate ABC transporter system, permease protein phnU E3384_16935 IPR017661 2-aminoethylphosphonate ABC transport system, membrane component PhnV E3384_16935 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_16935 IPR035906 MetI-like superfamily E3384_16940 IPR003720 tRNA sulfurtransferase ThiI E3384_16940 IPR020536 Thil, AANH domain E3384_16940 IPR026340 Thiazole biosynthesis domain E3384_16940 IPR001763 Rhodanese-like domain E3384_16940 IPR036873 Rhodanese-like domain superfamily E3384_16940 IPR004114 THUMP domain E3384_16940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_16945 IPR037004 Exonuclease VII, small subunit superfamily E3384_16945 IPR003761 Exonuclease VII, small subunit E3384_16950 IPR033749 Polyprenyl synthetase, conserved site E3384_16950 IPR000092 Polyprenyl synthetase E3384_16950 IPR008949 Isoprenoid synthase domain superfamily E3384_16955 IPR033248 Transketolase, C-terminal domain E3384_16955 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II E3384_16955 IPR029061 Thiamin diphosphate-binding fold E3384_16955 IPR005474 Transketolase, N-terminal E3384_16955 IPR020826 Transketolase binding site E3384_16955 IPR005477 Deoxyxylulose-5-phosphate synthase E3384_16955 IPR005475 Transketolase-like, pyrimidine-binding domain E3384_16960 IPR020471 Aldo/keto reductase E3384_16960 IPR023210 NADP-dependent oxidoreductase domain E3384_16960 IPR036812 NADP-dependent oxidoreductase domain superfamily E3384_16965 IPR026037 Phosphatidylglycerophosphatase A E3384_16965 IPR007686 YutG/PgpA domain E3384_16965 IPR036681 PgpA-like superfamily E3384_16970 IPR036921 PurM-like, N-terminal domain superfamily E3384_16970 IPR016188 PurM-like, N-terminal domain E3384_16970 IPR006283 Thiamine-monophosphate kinase E3384_16970 IPR010918 PurM-like, C-terminal domain E3384_16970 IPR036676 PurM-like, C-terminal domain superfamily E3384_16975 IPR006027 NusB/RsmB/TIM44 E3384_16975 IPR011605 NusB antitermination factor E3384_16975 IPR035926 NusB-like superfamily E3384_16980 IPR002180 Lumazine/riboflavin synthase E3384_16980 IPR036467 Lumazine/riboflavin synthase superfamily E3384_16980 IPR034964 Lumazine synthase E3384_16985 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal E3384_16985 IPR011549 Riboflavin-specific deaminase, C-terminal E3384_16985 IPR016193 Cytidine deaminase-like E3384_16985 IPR002125 Cytidine and deoxycytidylate deaminase domain E3384_16985 IPR016192 APOBEC/CMP deaminase, zinc-binding E3384_16985 IPR024072 Dihydrofolate reductase-like domain superfamily E3384_16985 IPR004794 Riboflavin biosynthesis protein RibD E3384_16990 IPR005144 ATP-cone domain E3384_16990 IPR003796 Ribonucleotide reductase regulator NrdR-like E3384_16995 IPR021658 Domain of unknown function DUF3251 E3384_16995 IPR037125 Lipoprotein YajI-like superfamily E3384_17000 IPR003055 Nucleoside-specific channel-forming protein Tsx E3384_17000 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily E3384_17000 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like E3384_17015 IPR003615 HNH nuclease E3384_17015 IPR002711 HNH endonuclease E3384_17030 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site E3384_17030 IPR022645 Protein-export membrane protein SecD/SecF, bacterial E3384_17030 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial E3384_17030 IPR005665 Protein-export membrane protein SecF, bacterial E3384_17035 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial E3384_17035 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site E3384_17035 IPR005791 Protein translocase subunit SecD E3384_17035 IPR027398 SecD export protein N-terminal TM domain E3384_17035 IPR022645 Protein-export membrane protein SecD/SecF, bacterial E3384_17040 IPR003849 Preprotein translocase YajC E3384_17045 IPR002616 tRNA-guanine(15) transglycosylase-like E3384_17045 IPR036511 Queuine tRNA-ribosyltransferase-like E3384_17045 IPR004803 tRNA-guanine transglycosylase E3384_17050 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily E3384_17050 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA E3384_17050 IPR042118 QueA, domain 1 E3384_17050 IPR042119 QueA, domain 2 E3384_17055 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria E3384_17055 IPR007431 Acyl carrier protein phosphodiesterase E3384_17060 IPR013766 Thioredoxin domain E3384_17060 IPR036249 Thioredoxin-like superfamily E3384_17060 IPR024706 Peroxiredoxin, AhpC-type E3384_17060 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant E3384_17060 IPR019479 Peroxiredoxin, C-terminal E3384_17065 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain E3384_17065 IPR017069 Maltodextrin glucosidase E3384_17065 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E3384_17065 IPR017853 Glycoside hydrolase superfamily E3384_17065 IPR013780 Glycosyl hydrolase, all-beta E3384_17065 IPR014756 Immunoglobulin E-set E3384_17070 IPR004840 Amino acid permease, conserved site E3384_17070 IPR004841 Amino acid permease/ SLC12A domain E3384_17075 IPR004685 Branched-chain amino acid transport system II carrier protein E3384_17080 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_17080 IPR021766 Phosphate regulon sensor protein PhoR E3384_17080 IPR005467 Histidine kinase domain E3384_17080 IPR013767 PAS fold E3384_17080 IPR035965 PAS domain superfamily E3384_17080 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR E3384_17080 IPR000014 PAS domain E3384_17080 IPR003594 Histidine kinase/HSP90-like ATPase E3384_17080 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_17080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_17080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_17085 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_17085 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB E3384_17085 IPR039420 Transcriptional regulatory protein WalR-like E3384_17085 IPR001789 Signal transduction response regulator, receiver domain E3384_17085 IPR011006 CheY-like superfamily E3384_17085 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_17090 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain E3384_17090 IPR026843 Nuclease SbcCD subunit D, C-terminal domain E3384_17090 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E3384_17090 IPR029052 Metallo-dependent phosphatase-like E3384_17090 IPR004593 Nuclease SbcCD subunit D E3384_17095 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_17095 IPR038729 Rad50/SbcC-type AAA domain E3384_17095 IPR004592 Nuclease SbcC, gammaproteobacteria type E3384_17100 IPR020846 Major facilitator superfamily domain E3384_17100 IPR036259 MFS transporter superfamily E3384_17100 IPR011701 Major facilitator superfamily E3384_17105 IPR000600 ROK family E3384_17110 IPR007476 Putative exonuclease, RdgC E3384_17115 IPR009664 Pyrimidine/purine nucleoside phosphorylase E3384_17115 IPR011051 RmlC-like cupin domain superfamily E3384_17115 IPR014710 RmlC-like jelly roll fold E3384_17120 IPR010843 Uncharacterised protein family AroM E3384_17125 IPR038462 YaiA-like superfamily E3384_17125 IPR032303 YaiA protein E3384_17130 IPR027544 Shikimate kinase 2 E3384_17130 IPR000623 Shikimate kinase/Threonine synthase-like 1 E3384_17130 IPR023000 Shikimate kinase, conserved site E3384_17130 IPR031322 Shikimate kinase/gluconokinase E3384_17130 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_17135 IPR003791 Protein of unknown function UPF0178 E3384_17140 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain E3384_17140 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_17140 IPR036291 NAD(P)-binding domain superfamily E3384_17140 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal E3384_17140 IPR000304 Pyrroline-5-carboxylate reductase E3384_17145 IPR029787 Nucleotide cyclase E3384_17145 IPR007894 MASE2 E3384_17145 IPR000160 GGDEF domain E3384_17150 IPR011690 Phosphate-starvation-induced PsiF repeat E3384_17155 IPR019732 Sigma-S stabilisation anti-adaptor protein E3384_17160 IPR011701 Major facilitator superfamily E3384_17160 IPR020846 Major facilitator superfamily domain E3384_17160 IPR036259 MFS transporter superfamily E3384_17160 IPR023692 Multidrug resistance protein MdtG E3384_17160 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG E3384_17170 IPR016185 Pre-ATP-grasp domain superfamily E3384_17170 IPR013815 ATP-grasp fold, subdomain 1 E3384_17170 IPR011095 D-alanine--D-alanine ligase, C-terminal E3384_17170 IPR005905 D-alanine--D-alanine ligase E3384_17170 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site E3384_17170 IPR011761 ATP-grasp fold E3384_17170 IPR011127 D-alanine--D-alanine ligase, N-terminal domain E3384_17175 IPR020490 Uncharacterised protein family YaiZ E3384_17180 IPR020513 Uncharacterised protein family, inner membrane YaiY E3384_17185 IPR011673 Protein of unknown function DUF1615 E3384_17190 IPR009248 SbmA/BacA-like E3384_17190 IPR036640 ABC transporter type 1, transmembrane domain superfamily E3384_17200 IPR012338 Beta-lactamase/transpeptidase-like E3384_17200 IPR001466 Beta-lactamase-related E3384_17205 IPR034719 Inhibitor of hydrogen peroxide resistance E3384_17205 IPR000595 Cyclic nucleotide-binding domain E3384_17205 IPR018490 Cyclic nucleotide-binding-like E3384_17205 IPR041687 IprA, winged helix-turn-helix domain E3384_17210 IPR011050 Pectin lyase fold/virulence factor E3384_17210 IPR006315 Outer membrane autotransporter barrel E3384_17210 IPR005546 Autotransporter beta-domain E3384_17210 IPR003991 Pertactin virulence factor family E3384_17210 IPR036709 Autotransporter beta-domain superfamily E3384_17215 IPR001731 Delta-aminolevulinic acid dehydratase E3384_17215 IPR013785 Aldolase-type TIM barrel E3384_17215 IPR030656 Delta-aminolevulinic acid dehydratase, active site E3384_17220 IPR012694 Propionate--CoA ligase E3384_17220 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain E3384_17220 IPR025110 AMP-binding enzyme, C-terminal domain E3384_17220 IPR020845 AMP-binding, conserved site E3384_17220 IPR000873 AMP-dependent synthetase/ligase E3384_17220 IPR042099 AMP-dependent synthetase-like superfamily E3384_17225 IPR036148 MmgE/PrpD superfamily E3384_17225 IPR012705 2-methylcitrate dehydratase PrpD E3384_17225 IPR005656 MmgE/PrpD E3384_17225 IPR042188 MmgE/PrpD superfamily, domain 2 E3384_17225 IPR042183 MmgE/PrpD superfamily, domain 1 E3384_17230 IPR024176 Citrate synthase, bacterial-type E3384_17230 IPR011278 2-methylcitrate synthase/citrate synthase type I E3384_17230 IPR036969 Citrate synthase superfamily E3384_17230 IPR016143 Citrate synthase-like, small alpha subdomain E3384_17230 IPR016142 Citrate synthase-like, large alpha subdomain E3384_17230 IPR002020 Citrate synthase E3384_17230 IPR019810 Citrate synthase active site E3384_17235 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site E3384_17235 IPR039556 ICL/PEPM domain E3384_17235 IPR012695 2-methylisocitrate lyase E3384_17235 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_17235 IPR040442 Pyruvate kinase-like domain superfamily E3384_17240 IPR009057 Homeobox-like domain superfamily E3384_17240 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_17240 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_17240 IPR002197 DNA binding HTH domain, Fis-type E3384_17240 IPR003593 AAA+ ATPase domain E3384_17240 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR E3384_17240 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal E3384_17240 IPR025944 Sigma-54 interaction domain, conserved site E3384_17240 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_17245 IPR036275 YdgH-like superfamily E3384_17245 IPR010854 Domain of unknown function DUF1471 E3384_17245 IPR025543 Dodecin-like E3384_17250 IPR004778 Homoserine/Threonine efflux protein E3384_17250 IPR001123 Amino acid exporter protein, LeuE-type E3384_17255 IPR000531 TonB-dependent receptor-like, beta-barrel E3384_17255 IPR039423 TonB-dependent receptor-like E3384_17255 IPR037066 TonB-dependent receptor, plug domain superfamily E3384_17255 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily E3384_17255 IPR010105 TonB-dependent siderophore receptor E3384_17255 IPR012910 TonB-dependent receptor, plug domain E3384_17270 IPR003317 Cytochrome ubiquinol oxidase subunit 2 E3384_17275 IPR002585 Cytochrome ubiquinol oxidase subunit 1 E3384_17285 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_17285 IPR006935 Helicase/UvrB, N-terminal E3384_17285 IPR014883 VRR-NUC domain E3384_17290 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class E3384_17290 IPR002941 DNA methylase N-4/N-6 E3384_17290 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_17290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_17290 IPR041405 Type III R-M EcoP15I, C-terminal E3384_17295 IPR011701 Major facilitator superfamily E3384_17295 IPR020846 Major facilitator superfamily domain E3384_17295 IPR036259 MFS transporter superfamily E3384_17305 IPR000551 MerR-type HTH domain E3384_17305 IPR011789 Cu(I)-responsive transcriptional regulator E3384_17305 IPR009061 Putative DNA-binding domain superfamily E3384_17305 IPR015358 Transcription regulator MerR, DNA binding E3384_17310 IPR008250 P-type ATPase, A domain superfamily E3384_17310 IPR023298 P-type ATPase, transmembrane domain superfamily E3384_17310 IPR018303 P-type ATPase, phosphorylation site E3384_17310 IPR023299 P-type ATPase, cytoplasmic domain N E3384_17310 IPR006122 Heavy metal-associated domain, copper ion-binding E3384_17310 IPR006121 Heavy metal-associated domain, HMA E3384_17310 IPR027256 P-type ATPase, subfamily IB E3384_17310 IPR001757 P-type ATPase E3384_17310 IPR023214 HAD superfamily E3384_17310 IPR017969 Heavy-metal-associated, conserved site E3384_17310 IPR036163 Heavy metal-associated domain superfamily E3384_17310 IPR036412 HAD-like superfamily E3384_17315 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain E3384_17315 IPR006143 RND efflux pump, membrane fusion protein E3384_17320 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains E3384_17320 IPR001036 Acriflavin resistance protein E3384_17320 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 E3384_17325 IPR003423 Outer membrane efflux protein E3384_17325 IPR010131 RND efflux system, outer membrane lipoprotein, NodT E3384_17345 IPR027385 Outer membrane protein beta-barrel domain E3384_17345 IPR000758 Virulence-related outer membrane protein E3384_17345 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel E3384_17360 IPR035919 EAL domain superfamily E3384_17360 IPR001633 EAL domain E3384_17360 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain E3384_17375 IPR036937 Fimbrial-type adhesion domain superfamily E3384_17375 IPR008966 Adhesion domain superfamily E3384_17375 IPR039458 FimA-like E3384_17380 IPR001829 Pili assembly chaperone, bacterial E3384_17380 IPR013783 Immunoglobulin-like fold E3384_17380 IPR016148 Pili assembly chaperone, C-terminal E3384_17380 IPR018046 Pili assembly chaperone, conserved site E3384_17380 IPR016147 Pili assembly chaperone, N-terminal E3384_17380 IPR008962 PapD-like superfamily E3384_17380 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_17385 IPR000015 Outer membrane usher protein E3384_17385 IPR037224 PapC, N-terminal domain superfamily E3384_17385 IPR042186 Outer membrane usher protein FimD, plug domain E3384_17385 IPR025949 PapC-like, C-terminal domain E3384_17385 IPR025885 PapC, N-terminal domain E3384_17385 IPR018030 Fimbrial membrane usher, conserved site E3384_17395 IPR018046 Pili assembly chaperone, conserved site E3384_17395 IPR016147 Pili assembly chaperone, N-terminal E3384_17395 IPR013783 Immunoglobulin-like fold E3384_17395 IPR008962 PapD-like superfamily E3384_17395 IPR001829 Pili assembly chaperone, bacterial E3384_17395 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_17395 IPR016148 Pili assembly chaperone, C-terminal E3384_17410 IPR000847 Transcription regulator HTH, LysR E3384_17410 IPR036390 Winged helix DNA-binding domain superfamily E3384_17410 IPR005119 LysR, substrate-binding E3384_17410 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_17415 IPR000639 Epoxide hydrolase-like E3384_17415 IPR000073 Alpha/beta hydrolase fold-1 E3384_17415 IPR029058 Alpha/Beta hydrolase fold E3384_17420 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily E3384_17420 IPR011234 Fumarylacetoacetase-like, C-terminal E3384_17425 IPR033940 3-isopropylmalate dehydratase, swivel domain E3384_17425 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain E3384_17425 IPR004431 3-isopropylmalate dehydratase, small subunit E3384_17425 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel E3384_17430 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain E3384_17430 IPR018136 Aconitase family, 4Fe-4S cluster binding site E3384_17430 IPR004430 3-isopropylmalate dehydratase, large subunit E3384_17430 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 E3384_17430 IPR033941 3-Isopropylmalate dehydratase, catalytic domain E3384_17430 IPR036008 Aconitase, iron-sulfur domain E3384_17435 IPR036259 MFS transporter superfamily E3384_17435 IPR011701 Major facilitator superfamily E3384_17435 IPR020846 Major facilitator superfamily domain E3384_17440 IPR015079 Protein of unknown function DUF1889 E3384_17440 IPR037210 YoaC-like superfamily E3384_17445 IPR030994 Diol dehydratase reactivase ATPase-like domain E3384_17445 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily E3384_17445 IPR040916 DD-reactivating factor swiveling domain E3384_17445 IPR009191 Diol dehydratase-reactivating factor alpha subunit E3384_17450 IPR009191 Diol dehydratase-reactivating factor alpha subunit E3384_17450 IPR040916 DD-reactivating factor swiveling domain E3384_17450 IPR030994 Diol dehydratase reactivase ATPase-like domain E3384_17450 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily E3384_17460 IPR011010 DNA breaking-rejoining enzyme, catalytic core E3384_17460 IPR013762 Integrase-like, catalytic domain superfamily E3384_17460 IPR002104 Integrase, catalytic domain E3384_17460 IPR010998 Integrase/recombinase, N-terminal E3384_17460 IPR025166 Integrase, DNA-binding domain E3384_17460 IPR038488 Integrase, DNA-binding domain superfamily E3384_17470 IPR000965 GPR domain E3384_17470 IPR015590 Aldehyde dehydrogenase domain E3384_17470 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site E3384_17470 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_17470 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_17470 IPR016161 Aldehyde/histidinol dehydrogenase E3384_17470 IPR012134 Glutamate-5-semialdehyde dehydrogenase E3384_17475 IPR036974 PUA domain superfamily E3384_17475 IPR015947 PUA-like superfamily E3384_17475 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase E3384_17475 IPR011529 Glutamate 5-kinase E3384_17475 IPR001057 Glutamate/acetylglutamate kinase E3384_17475 IPR041739 Glutamate-5-kinase domain E3384_17475 IPR001048 Aspartate/glutamate/uridylate kinase E3384_17475 IPR036393 Acetylglutamate kinase-like superfamily E3384_17475 IPR019797 Glutamate 5-kinase, conserved site E3384_17475 IPR002478 PUA domain E3384_17480 IPR013793 Porin, Gram-negative type, conserved site E3384_17480 IPR001702 Porin, Gram-negative type E3384_17480 IPR033900 Porin domain, Gram-negative type E3384_17480 IPR023614 Porin domain superfamily E3384_17480 IPR001897 Porin, gammaproteobacterial E3384_17485 IPR038208 Sigma factor-binding protein Crl superfamily E3384_17485 IPR009986 Sigma factor-binding transcriptional regulator Crl E3384_17490 IPR029058 Alpha/Beta hydrolase fold E3384_17490 IPR010520 UPF0255 family E3384_17495 IPR000836 Phosphoribosyltransferase domain E3384_17495 IPR029057 Phosphoribosyltransferase-like E3384_17495 IPR023747 Xanthine-guanine phosphoribosyltransferase E3384_17500 IPR011650 Peptidase M20, dimerisation domain E3384_17500 IPR001160 Peptidase M20C, Xaa-His dipeptidase E3384_17500 IPR002933 Peptidase M20 E3384_17505 IPR000352 Peptide chain release factor class I E3384_17505 IPR017509 Putative peptide chain release factor H E3384_17510 IPR036025 tRNA-splicing ligase RtcB-like superfamily E3384_17515 IPR001126 UmuC domain E3384_17515 IPR024728 DNA polymerase type-Y, HhH motif E3384_17515 IPR036775 DNA polymerase, Y-family, little finger domain superfamily E3384_17515 IPR017961 DNA polymerase, Y-family, little finger domain E3384_17515 IPR022880 DNA polymerase IV E3384_17520 IPR038063 L,D-transpeptidase catalytic domain-like E3384_17520 IPR005490 L,D-transpeptidase catalytic domain E3384_17525 IPR029055 Nucleophile aminohydrolases, N-terminal E3384_17525 IPR017932 Glutamine amidotransferase type 2 domain E3384_17525 IPR026869 Putative glutamine amidotransferase type 2 E3384_17530 IPR035461 GmhA/DiaA E3384_17530 IPR004515 Phosphoheptose isomerase E3384_17530 IPR001347 Sugar isomerase (SIS) E3384_17535 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal E3384_17535 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal E3384_17535 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily E3384_17535 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily E3384_17535 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type E3384_17535 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain E3384_17535 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal E3384_17540 IPR001110 Uncharacterised protein family UPF0012, conserved site E3384_17540 IPR036526 Carbon-nitrogen hydrolase superfamily E3384_17540 IPR003010 Carbon-nitrogen hydrolase E3384_17550 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel E3384_17550 IPR027385 Outer membrane protein beta-barrel domain E3384_17570 IPR019885 Transcription regulator HTH, AsnC-type, conserved site E3384_17570 IPR036390 Winged helix DNA-binding domain superfamily E3384_17570 IPR011991 ArsR-like helix-turn-helix domain E3384_17570 IPR000485 AsnC-type HTH domain E3384_17570 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_17570 IPR011008 Dimeric alpha-beta barrel E3384_17570 IPR019888 Transcription regulator AsnC-type E3384_17570 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain E3384_17615 IPR005119 LysR, substrate-binding E3384_17615 IPR000847 Transcription regulator HTH, LysR E3384_17615 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_17615 IPR036390 Winged helix DNA-binding domain superfamily E3384_17635 IPR037224 PapC, N-terminal domain superfamily E3384_17635 IPR025949 PapC-like, C-terminal domain E3384_17635 IPR042186 Outer membrane usher protein FimD, plug domain E3384_17635 IPR018030 Fimbrial membrane usher, conserved site E3384_17635 IPR000015 Outer membrane usher protein E3384_17635 IPR025885 PapC, N-terminal domain E3384_17640 IPR018046 Pili assembly chaperone, conserved site E3384_17640 IPR016147 Pili assembly chaperone, N-terminal E3384_17640 IPR016148 Pili assembly chaperone, C-terminal E3384_17640 IPR001829 Pili assembly chaperone, bacterial E3384_17640 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_17640 IPR008962 PapD-like superfamily E3384_17640 IPR013783 Immunoglobulin-like fold E3384_17670 IPR025048 Protein of unknown function DUF3987) E3384_17700 IPR006073 GTP binding domain E3384_17700 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_17710 IPR001034 DeoR-type HTH domain E3384_17710 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_17710 IPR026881 WYL domain E3384_17740 IPR038612 YkfF-like domain superfamily E3384_17740 IPR009253 Protein of unknown function DUF905 E3384_17745 IPR026325 Protein of unknown function DUF932 E3384_17760 IPR004914 Antirestriction protein E3384_17760 IPR042297 Antirestriction domain superfamily E3384_17765 IPR037518 MPN domain E3384_17765 IPR020891 Uncharacterised protein family UPF0758, conserved site E3384_17765 IPR001405 Uncharacterised protein family UPF0758 E3384_17765 IPR025657 RadC-like JAB domain E3384_17775 IPR009329 Protein of unknown function DUF987 E3384_17785 IPR038025 Antitoxin CbeA superfamily E3384_17785 IPR009320 Antitoxin CbeA E3384_17795 IPR009610 CbtA toxin of type IV toxin-antitoxin system E3384_17820 IPR036397 Ribonuclease H superfamily E3384_17820 IPR013520 Exonuclease, RNase T/DNA polymerase III E3384_17820 IPR006309 DNA polymerase 3, epsilon subunit E3384_17820 IPR012337 Ribonuclease H-like superfamily E3384_17820 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain E3384_17825 IPR022892 Ribonuclease HI E3384_17825 IPR036397 Ribonuclease H superfamily E3384_17825 IPR002156 Ribonuclease H domain E3384_17825 IPR012337 Ribonuclease H-like superfamily E3384_17830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_17830 IPR013216 Methyltransferase type 11 E3384_17830 IPR026669 Arsenite methyltransferase-like E3384_17835 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain E3384_17835 IPR001279 Metallo-beta-lactamase E3384_17835 IPR017782 Hydroxyacylglutathione hydrolase E3384_17835 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain E3384_17835 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E3384_17840 IPR000189 Prokaryotic transglycosylase, active site E3384_17840 IPR036779 LysM domain superfamily E3384_17840 IPR008258 Transglycosylase SLT domain 1 E3384_17840 IPR018392 LysM domain E3384_17840 IPR023346 Lysozyme-like domain superfamily E3384_17845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_17845 IPR013216 Methyltransferase type 11 E3384_17850 IPR005135 Endonuclease/exonuclease/phosphatase E3384_17850 IPR036691 Endonuclease/exonuclease/phosphatase superfamily E3384_17850 IPR022958 Uncharacterised protein family UPF0294 E3384_17855 IPR011701 Major facilitator superfamily E3384_17855 IPR020846 Major facilitator superfamily domain E3384_17855 IPR036259 MFS transporter superfamily E3384_17860 IPR036390 Winged helix DNA-binding domain superfamily E3384_17860 IPR000847 Transcription regulator HTH, LysR E3384_17860 IPR005119 LysR, substrate-binding E3384_17860 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_17865 IPR018170 Aldo/keto reductase, conserved site E3384_17865 IPR036812 NADP-dependent oxidoreductase domain superfamily E3384_17865 IPR023210 NADP-dependent oxidoreductase domain E3384_17865 IPR020471 Aldo/keto reductase E3384_17900 IPR006543 Histidinol-phosphate phosphatase E3384_17900 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase E3384_17900 IPR023214 HAD superfamily E3384_17900 IPR036412 HAD-like superfamily E3384_17900 IPR006549 HAD-superfamily hydrolase,subfamily IIIA E3384_17905 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria E3384_17905 IPR026253 Methionine import ATP-binding protein MetN E3384_17905 IPR003593 AAA+ ATPase domain E3384_17905 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal E3384_17905 IPR017871 ABC transporter, conserved site E3384_17905 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain E3384_17905 IPR003439 ABC transporter-like E3384_17905 IPR018449 NIL domain E3384_17905 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_17910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_17910 IPR035906 MetI-like superfamily E3384_17915 IPR004872 Lipoprotein NlpA family E3384_17920 IPR030852 Outer membrane lipoprotein RcsF E3384_17925 IPR036413 YaeB-like superfamily E3384_17925 IPR036414 YaeB, N-terminal domain superfamily E3384_17925 IPR023368 Uncharacterised protein family UPF0066, conserved site E3384_17925 IPR040372 YaeB-like E3384_17925 IPR041369 TrmO, C-terminal E3384_17925 IPR023370 TrmO-like, N-terminal domain E3384_17930 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain E3384_17930 IPR036621 Anticodon-binding domain superfamily E3384_17930 IPR002316 Proline-tRNA ligase, class IIa E3384_17930 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type E3384_17930 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 E3384_17930 IPR033730 Prokaryote proline-tRNA ligase core domain E3384_17930 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily E3384_17930 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) E3384_17930 IPR004154 Anticodon-binding E3384_17930 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_17935 IPR033450 NlpE, C-terminal OB domain E3384_17935 IPR007298 Copper resistance lipoprotein NlpE E3384_17935 IPR038139 NlpE, C-terminal domain superfamily E3384_17940 IPR000352 Peptide chain release factor class I E3384_17945 IPR038590 YaeQ superfamily E3384_17945 IPR011335 Restriction endonuclease type II-like E3384_17945 IPR009822 YaeQ E3384_17950 IPR009624 Uncharacterised protein family UPF0253 E3384_17955 IPR009778 Modulator of Rho-dependent transcription termination E3384_17955 IPR038626 Rof-like superfamily E3384_17955 IPR023534 Rof/RNase P-like E3384_17960 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal E3384_17960 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain E3384_17960 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal E3384_17960 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal E3384_17960 IPR012094 tRNA(Ile)-lysidine synthase E3384_17960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_17965 IPR037478 YwkD-like domain E3384_17965 IPR037523 Vicinal oxygen chelate (VOC) domain E3384_17965 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain E3384_17965 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase E3384_17975 IPR004302 Cellulose/chitin-binding protein, N-terminal E3384_17975 IPR041029 N-acetylglucosamine binding protein A domain 2 E3384_17975 IPR020879 N-acetylglucosamine-binding protein A E3384_17975 IPR014756 Immunoglobulin E-set E3384_17980 IPR001095 Acetyl-CoA carboxylase, alpha subunit E3384_17980 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal E3384_17980 IPR029045 ClpP/crotonase-like domain superfamily E3384_17985 IPR003141 Polymerase/histidinol phosphatase, N-terminal E3384_17985 IPR004805 DNA polymerase III, alpha subunit E3384_17985 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type E3384_17985 IPR029460 DNA polymerase, helix-hairpin-helix motif E3384_17985 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain E3384_17985 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain E3384_17985 IPR016195 Polymerase/histidinol phosphatase-like E3384_17985 IPR004013 PHP domain E3384_17985 IPR040982 DNA polymerase III alpha subunit finger domain E3384_17990 IPR001352 Ribonuclease HII/HIII E3384_17990 IPR024567 Ribonuclease HII/HIII domain E3384_17990 IPR022898 Ribonuclease HII E3384_17990 IPR012337 Ribonuclease H-like superfamily E3384_17990 IPR036397 Ribonuclease H superfamily E3384_17995 IPR003835 Glycosyl transferase, family 19 E3384_18000 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal E3384_18000 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily E3384_18000 IPR011004 Trimeric LpxA-like superfamily E3384_18000 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase E3384_18000 IPR001451 Hexapeptide repeat E3384_18000 IPR018357 Hexapeptide transferase, conserved site E3384_18005 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ E3384_18005 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ E3384_18005 IPR029069 HotDog domain superfamily E3384_18010 IPR011004 Trimeric LpxA-like superfamily E3384_18010 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD E3384_18010 IPR018357 Hexapeptide transferase, conserved site E3384_18010 IPR001451 Hexapeptide repeat E3384_18010 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region E3384_18015 IPR005632 Chaperone protein Skp E3384_18015 IPR024930 Skp domain superfamily E3384_18020 IPR000184 Bacterial surface antigen (D15) E3384_18020 IPR034746 POTRA domain E3384_18020 IPR023707 Outer membrane protein assembly factor BamA E3384_18020 IPR039910 Surface antigen D15-like E3384_18020 IPR010827 POTRA domain, BamA/TamA-like E3384_18025 IPR001478 PDZ domain E3384_18025 IPR041489 PDZ domain 6 E3384_18025 IPR036034 PDZ superfamily E3384_18025 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase E3384_18025 IPR008915 Peptidase M50 E3384_18030 IPR000374 Phosphatidate cytidylyltransferase E3384_18035 IPR001441 Decaprenyl diphosphate synthase-like E3384_18035 IPR036424 Decaprenyl diphosphate synthase-like superfamily E3384_18035 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site E3384_18040 IPR036169 DXP reductoisomerase, C-terminal domain superfamily E3384_18040 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase E3384_18040 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal E3384_18040 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal E3384_18040 IPR026877 DXP reductoisomerase C-terminal domain E3384_18040 IPR036291 NAD(P)-binding domain superfamily E3384_18045 IPR036191 RRF superfamily E3384_18045 IPR023584 Ribosome recycling factor domain E3384_18045 IPR002661 Ribosome recycling factor E3384_18050 IPR036393 Acetylglutamate kinase-like superfamily E3384_18050 IPR001048 Aspartate/glutamate/uridylate kinase E3384_18050 IPR011817 Uridylate kinase E3384_18050 IPR015963 Uridylate kinase, bacteria E3384_18055 IPR001816 Translation elongation factor EFTs/EF1B E3384_18055 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation E3384_18055 IPR036402 Elongation factor Ts, dimerisation domain superfamily E3384_18055 IPR018101 Translation elongation factor Ts, conserved site E3384_18055 IPR009060 UBA-like superfamily E3384_18060 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid E3384_18060 IPR018130 Ribosomal protein S2, conserved site E3384_18060 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily E3384_18060 IPR001865 Ribosomal protein S2 E3384_18065 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 E3384_18065 IPR001714 Peptidase M24, methionine aminopeptidase E3384_18065 IPR000994 Peptidase M24 E3384_18065 IPR036005 Creatinase/aminopeptidase-like E3384_18070 IPR002912 ACT domain E3384_18070 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase E3384_18070 IPR002934 Polymerase, nucleotidyl transferase domain E3384_18070 IPR003607 HD/PDEase domain E3384_18070 IPR006674 HD domain E3384_18070 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme E3384_18075 IPR011004 Trimeric LpxA-like superfamily E3384_18075 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily E3384_18075 IPR018357 Hexapeptide transferase, conserved site E3384_18075 IPR001451 Hexapeptide repeat E3384_18075 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family E3384_18075 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 E3384_18080 IPR036259 MFS transporter superfamily E3384_18080 IPR004736 MFS transporter, metabolite:H symporter E3384_18080 IPR011701 Major facilitator superfamily E3384_18080 IPR005829 Sugar transporter, conserved site E3384_18080 IPR020846 Major facilitator superfamily domain E3384_18080 IPR005828 Major facilitator, sugar transporter-like E3384_18085 IPR020911 Uncharacterised protein family UPF0325 E3384_18090 IPR042070 PucR C-terminal helix-turn-helix domain superfamily E3384_18090 IPR025736 PucR C-terminal helix-turn-helix domain E3384_18090 IPR008599 Putative sugar diacid recognition E3384_18090 IPR041522 CdaR, GGDEF-like domain E3384_18095 IPR001940 Peptidase S1C E3384_18095 IPR009003 Peptidase S1, PA clan E3384_18095 IPR001478 PDZ domain E3384_18095 IPR036034 PDZ superfamily E3384_18095 IPR011782 Peptidase S1C, Do E3384_18100 IPR006261 dNTP triphosphohydrolase E3384_18100 IPR020779 dNTP triphosphohydrolase, type 1 E3384_18100 IPR003607 HD/PDEase domain E3384_18100 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily E3384_18100 IPR006674 HD domain E3384_18100 IPR026875 Phosphohydrolase-associated domain E3384_18105 IPR000845 Nucleoside phosphorylase domain E3384_18105 IPR010049 MTA/SAH nucleosidase E3384_18105 IPR035994 Nucleoside phosphorylase superfamily E3384_18110 IPR002491 ABC transporter periplasmic binding domain E3384_18110 IPR023544 ABC transporter, vitamin B12-binding protein E3384_18115 IPR005115 Uncharacterised domain UPF0126 E3384_18120 IPR035903 HesB-like domain superfamily E3384_18120 IPR023063 FeS cluster insertion protein ErpA E3384_18120 IPR017870 FeS cluster insertion, C-terminal, conserved site E3384_18120 IPR000361 FeS cluster biogenesis E3384_18120 IPR016092 FeS cluster insertion protein E3384_18125 IPR001807 Chloride channel, voltage gated E3384_18125 IPR023861 Chloride channel, ClcA E3384_18125 IPR014743 Chloride channel, core E3384_18130 IPR015424 Pyridoxal phosphate-dependent transferase E3384_18130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_18130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_18130 IPR005814 Aminotransferase class-III E3384_18130 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase E3384_18135 IPR021407 Protein of unknown function DUF2544 E3384_18140 IPR036937 Fimbrial-type adhesion domain superfamily E3384_18140 IPR008966 Adhesion domain superfamily E3384_18140 IPR000259 Fimbrial-type adhesion domain E3384_18145 IPR008966 Adhesion domain superfamily E3384_18145 IPR036937 Fimbrial-type adhesion domain superfamily E3384_18145 IPR000259 Fimbrial-type adhesion domain E3384_18150 IPR036937 Fimbrial-type adhesion domain superfamily E3384_18150 IPR000259 Fimbrial-type adhesion domain E3384_18150 IPR008966 Adhesion domain superfamily E3384_18155 IPR013783 Immunoglobulin-like fold E3384_18155 IPR008962 PapD-like superfamily E3384_18155 IPR016147 Pili assembly chaperone, N-terminal E3384_18155 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_18155 IPR001829 Pili assembly chaperone, bacterial E3384_18155 IPR016148 Pili assembly chaperone, C-terminal E3384_18155 IPR018046 Pili assembly chaperone, conserved site E3384_18160 IPR037224 PapC, N-terminal domain superfamily E3384_18160 IPR025885 PapC, N-terminal domain E3384_18160 IPR025949 PapC-like, C-terminal domain E3384_18160 IPR042186 Outer membrane usher protein FimD, plug domain E3384_18160 IPR018030 Fimbrial membrane usher, conserved site E3384_18160 IPR000015 Outer membrane usher protein E3384_18175 IPR037294 ABC transporter, BtuC-like E3384_18175 IPR000522 ABC transporter, permease protein, BtuC-like E3384_18180 IPR002491 ABC transporter periplasmic binding domain E3384_18185 IPR003593 AAA+ ATPase domain E3384_18185 IPR003439 ABC transporter-like E3384_18185 IPR017871 ABC transporter, conserved site E3384_18185 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_18190 IPR039423 TonB-dependent receptor-like E3384_18190 IPR037066 TonB-dependent receptor, plug domain superfamily E3384_18190 IPR012910 TonB-dependent receptor, plug domain E3384_18190 IPR010916 TonB box, conserved site E3384_18190 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily E3384_18190 IPR010917 TonB-dependent receptor, conserved site E3384_18190 IPR000531 TonB-dependent receptor-like, beta-barrel E3384_18190 IPR010105 TonB-dependent siderophore receptor E3384_18195 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain E3384_18195 IPR028166 Bifunctional transglycosylase second domain E3384_18195 IPR023346 Lysozyme-like domain superfamily E3384_18195 IPR036950 Penicillin binding protein transglycosylase domain E3384_18195 IPR011813 Penicillin-binding protein 1B E3384_18195 IPR001460 Penicillin-binding protein, transpeptidase E3384_18195 IPR012338 Beta-lactamase/transpeptidase-like E3384_18195 IPR001264 Glycosyl transferase, family 51 E3384_18200 IPR011545 DEAD/DEAH box helicase domain E3384_18200 IPR007502 Helicase-associated domain E3384_18200 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_18200 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_18200 IPR010225 ATP-dependent helicase HrpB E3384_18200 IPR001650 Helicase, C-terminal E3384_18200 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal E3384_18205 IPR004175 RNA 2',3'-cyclic phosphodiesterase E3384_18205 IPR014051 Phosphoesterase, HXTX E3384_18205 IPR009097 Cyclic phosphodiesterase E3384_18210 IPR041465 SfsA, N-terminal OB domain E3384_18210 IPR040452 Sugar fermentation stimulation protein, C-terminal E3384_18210 IPR005224 Sugar fermentation stimulation protein E3384_18215 IPR012784 RNA polymerase-binding transcription factor DksA E3384_18215 IPR037187 DksA, N-terminal domain superfamily E3384_18215 IPR020458 Zinc finger, DksA/TraR C4-type conserved site E3384_18215 IPR000962 Zinc finger, DksA/TraR C4-type E3384_18215 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria E3384_18220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_18220 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain E3384_18220 IPR000924 Glutamyl/glutaminyl-tRNA synthetase E3384_18220 IPR022380 Glutamyl-Q tRNA(Asp) synthetase E3384_18225 IPR002646 Poly A polymerase, head domain E3384_18225 IPR025866 Polymerase A arginine-rich C-terminal domain E3384_18225 IPR010206 Poly(A) polymerase I E3384_18225 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain E3384_18230 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily E3384_18230 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK E3384_18235 IPR003700 Ketopantoate hydroxymethyltransferase E3384_18235 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_18235 IPR040442 Pyruvate kinase-like domain superfamily E3384_18240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_18240 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain E3384_18240 IPR003721 Pantoate-beta-alanine ligase E3384_18240 IPR004821 Cytidyltransferase-like domain E3384_18245 IPR003190 Aspartate decarboxylase E3384_18245 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_18255 IPR018046 Pili assembly chaperone, conserved site E3384_18255 IPR016147 Pili assembly chaperone, N-terminal E3384_18255 IPR013783 Immunoglobulin-like fold E3384_18255 IPR008962 PapD-like superfamily E3384_18255 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_18255 IPR001829 Pili assembly chaperone, bacterial E3384_18255 IPR016148 Pili assembly chaperone, C-terminal E3384_18260 IPR000015 Outer membrane usher protein E3384_18260 IPR042186 Outer membrane usher protein FimD, plug domain E3384_18260 IPR037224 PapC, N-terminal domain superfamily E3384_18260 IPR025949 PapC-like, C-terminal domain E3384_18260 IPR025885 PapC, N-terminal domain E3384_18260 IPR018030 Fimbrial membrane usher, conserved site E3384_18265 IPR008966 Adhesion domain superfamily E3384_18265 IPR036937 Fimbrial-type adhesion domain superfamily E3384_18265 IPR000259 Fimbrial-type adhesion domain E3384_18285 IPR002509 NodB homology domain E3384_18285 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel E3384_18290 IPR004701 Phosphotransferase system, mannose-type IIA component E3384_18290 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily E3384_18290 IPR033887 PTS system mannose/sorbose specific IIA subunit E3384_18300 IPR001829 Pili assembly chaperone, bacterial E3384_18300 IPR008962 PapD-like superfamily E3384_18300 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_18300 IPR016147 Pili assembly chaperone, N-terminal E3384_18300 IPR018046 Pili assembly chaperone, conserved site E3384_18300 IPR016148 Pili assembly chaperone, C-terminal E3384_18300 IPR013783 Immunoglobulin-like fold E3384_18305 IPR037224 PapC, N-terminal domain superfamily E3384_18305 IPR025885 PapC, N-terminal domain E3384_18305 IPR025949 PapC-like, C-terminal domain E3384_18305 IPR000015 Outer membrane usher protein E3384_18305 IPR042186 Outer membrane usher protein FimD, plug domain E3384_18305 IPR018030 Fimbrial membrane usher, conserved site E3384_18310 IPR008966 Adhesion domain superfamily E3384_18310 IPR036937 Fimbrial-type adhesion domain superfamily E3384_18310 IPR000259 Fimbrial-type adhesion domain E3384_18315 IPR013525 ABC-2 type transporter E3384_18315 IPR000412 ABC-2 transporter E3384_18320 IPR003439 ABC transporter-like E3384_18320 IPR017871 ABC transporter, conserved site E3384_18320 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_18320 IPR003593 AAA+ ATPase domain E3384_18325 IPR036874 Carbonic anhydrase superfamily E3384_18325 IPR001765 Carbonic anhydrase E3384_18325 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site E3384_18330 IPR000836 Phosphoribosyltransferase domain E3384_18330 IPR005904 Hypoxanthine phosphoribosyl transferase E3384_18330 IPR029057 Phosphoribosyltransferase-like E3384_18335 IPR017511 PQQ-dependent membrane bound dehydrogenase E3384_18335 IPR002372 Pyrrolo-quinoline quinone repeat E3384_18335 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat E3384_18335 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily E3384_18335 IPR001479 Quinoprotein dehydrogenase, conserved site E3384_18340 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_18340 IPR001117 Multicopper oxidase, type 1 E3384_18340 IPR011707 Multicopper oxidase, type 3 E3384_18340 IPR011706 Multicopper oxidase, type 2 E3384_18340 IPR002355 Multicopper oxidase, copper-binding site E3384_18340 IPR008972 Cupredoxin E3384_18345 IPR019114 Chaperone lipoprotein, PulS/OutS-like E3384_18345 IPR038432 PulS/OutS-like superfamily E3384_18350 IPR001045 Spermidine/spermine synthases E3384_18350 IPR030374 Polyamine biosynthesis domain E3384_18350 IPR035246 Spermidine synthase, tetramerisation domain E3384_18350 IPR037163 Spermidine synthase, tetramerisation domain superfamily E3384_18350 IPR030373 Polyamine biosynthesis domain, conserved site E3384_18350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_18355 IPR016067 S-adenosylmethionine decarboxylase, core E3384_18355 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic E3384_18355 IPR009165 S-adenosylmethionine decarboxylase, bacterial E3384_18360 IPR014036 DeoR C-terminal sensor domain E3384_18360 IPR001034 DeoR-type HTH domain E3384_18360 IPR037171 NagB/RpiA transferase-like E3384_18360 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_18360 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_18360 IPR036390 Winged helix DNA-binding domain superfamily E3384_18365 IPR005255 PdxA family E3384_18370 IPR042213 Nucleotide-binding, C-terminal domain superfamily E3384_18370 IPR031475 Nucleotide-binding C-terminal domain E3384_18370 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily E3384_18370 IPR010737 Four-carbon acid sugar kinase, N-terminal domain E3384_18375 IPR004684 2-keto-3-deoxygluconate permease E3384_18380 IPR008249 Uncharacterised protein family UPF0231 E3384_18395 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 E3384_18395 IPR036008 Aconitase, iron-sulfur domain E3384_18395 IPR015932 Aconitase, domain 2 E3384_18395 IPR015929 Aconitase B, swivel E3384_18395 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain E3384_18395 IPR004406 Aconitase B E3384_18395 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel E3384_18395 IPR018136 Aconitase family, 4Fe-4S cluster binding site E3384_18395 IPR036288 Aconitase B, HEAT-like domain superfamily E3384_18395 IPR015933 Aconitase B, HEAT-like domain E3384_18425 IPR036008 Aconitase, iron-sulfur domain E3384_18425 IPR004406 Aconitase B E3384_18425 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 E3384_18425 IPR036288 Aconitase B, HEAT-like domain superfamily E3384_18425 IPR015929 Aconitase B, swivel E3384_18425 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel E3384_18425 IPR015933 Aconitase B, HEAT-like domain E3384_18425 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain E3384_18425 IPR015932 Aconitase, domain 2 E3384_18425 IPR018136 Aconitase family, 4Fe-4S cluster binding site E3384_18430 IPR021728 Protein of unknown function DUF3300 E3384_18445 IPR006258 Dihydrolipoamide dehydrogenase E3384_18445 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_18445 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily E3384_18445 IPR023753 FAD/NAD(P)-binding domain E3384_18445 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3384_18445 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site E3384_18445 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I E3384_18450 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain E3384_18450 IPR011053 Single hybrid motif E3384_18450 IPR004167 Peripheral subunit-binding domain E3384_18450 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily E3384_18450 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex E3384_18450 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site E3384_18450 IPR000089 Biotin/lipoyl attachment E3384_18450 IPR036625 E3-binding domain superfamily E3384_18455 IPR005474 Transketolase, N-terminal E3384_18455 IPR029061 Thiamin diphosphate-binding fold E3384_18455 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II E3384_18455 IPR041621 Pyruvate dehydrogenase E1 component, middle domain E3384_18455 IPR004660 Pyruvate dehydrogenase E1 component E3384_18455 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal E3384_18460 IPR036390 Winged helix DNA-binding domain superfamily E3384_18460 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_18460 IPR000524 Transcription regulator HTH, GntR E3384_18460 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_18460 IPR011711 GntR, C-terminal E3384_18465 IPR004840 Amino acid permease, conserved site E3384_18465 IPR004841 Amino acid permease/ SLC12A domain E3384_18470 IPR039672 Lactose permease-like E3384_18470 IPR036259 MFS transporter superfamily E3384_18470 IPR001927 Sodium:galactoside symporter E3384_18470 IPR018043 Sodium:galactoside symporter, conserved site E3384_18475 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily E3384_18475 IPR006710 Glycoside hydrolase, family 43 E3384_18475 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily E3384_18475 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain E3384_18480 IPR031347 Protein AmpE E3384_18485 IPR002502 N-acetylmuramoyl-L-alanine amidase domain E3384_18485 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily E3384_18490 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD E3384_18490 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily E3384_18490 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal E3384_18490 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal E3384_18490 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal E3384_18490 IPR004393 Nicotinate-nucleotide pyrophosphorylase E3384_18490 IPR013785 Aldolase-type TIM barrel E3384_18500 IPR012902 Prokaryotic N-terminal methylation site E3384_18505 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_18505 IPR001482 Type II/IV secretion system protein E3384_18505 IPR007831 General secretory system II, protein E, N-terminal E3384_18510 IPR003004 GspF/PilC family E3384_18510 IPR042094 Type II secretion system F domain superfamily E3384_18510 IPR018076 Type II secretion system F domain E3384_18510 IPR001992 Type II secretion system conserved site E3384_18515 IPR005993 GMP reductase E3384_18515 IPR001093 IMP dehydrogenase/GMP reductase E3384_18515 IPR015875 IMP dehydrogenase / GMP reductase, conserved site E3384_18515 IPR013785 Aldolase-type TIM barrel E3384_18520 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_18520 IPR001977 Dephospho-CoA kinase E3384_18525 IPR009777 Cell division protein ZapD E3384_18525 IPR036268 ZapD domain superfamily E3384_18525 IPR027462 Z ring-associated protein D, C-terminal E3384_18530 IPR005584 DNA gyrase inhibitor YacG E3384_18530 IPR013088 Zinc finger, NHR/GATA-type E3384_18545 IPR003561 Mutator MutT E3384_18545 IPR015797 NUDIX hydrolase-like domain superfamily E3384_18545 IPR020476 NUDIX hydrolase E3384_18545 IPR020084 NUDIX hydrolase, conserved site E3384_18545 IPR000086 NUDIX hydrolase domain E3384_18550 IPR036670 SecA, preprotein cross-linking domain superfamily E3384_18550 IPR020937 SecA conserved site E3384_18550 IPR011116 SecA Wing/Scaffold E3384_18550 IPR011130 SecA, preprotein cross-linking domain E3384_18550 IPR014018 SecA motor DEAD E3384_18550 IPR011115 SecA DEAD-like, N-terminal E3384_18550 IPR000185 Protein translocase subunit SecA E3384_18550 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_18550 IPR036266 SecA, Wing/Scaffold superfamily E3384_18550 IPR004027 SEC-C motif E3384_18555 IPR009502 Secretion monitor E3384_18560 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_18560 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase E3384_18560 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal E3384_18560 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal E3384_18565 IPR036525 Tubulin/FtsZ, GTPase domain superfamily E3384_18565 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain E3384_18565 IPR024757 Cell division protein FtsZ, C-terminal E3384_18565 IPR008280 Tubulin/FtsZ, C-terminal E3384_18565 IPR020805 Cell division protein FtsZ, conserved site E3384_18565 IPR000158 Cell division protein FtsZ E3384_18565 IPR003008 Tubulin/FtsZ, GTPase domain E3384_18570 IPR003494 SHS2 domain inserted in FtsA E3384_18570 IPR020823 Cell division protein FtsA E3384_18575 IPR034746 POTRA domain E3384_18575 IPR005548 Cell division protein FtsQ/DivIB E3384_18575 IPR026579 Cell division protein FtsQ E3384_18575 IPR013685 POTRA domain, FtsQ-type E3384_18580 IPR016185 Pre-ATP-grasp domain superfamily E3384_18580 IPR011761 ATP-grasp fold E3384_18580 IPR005905 D-alanine--D-alanine ligase E3384_18580 IPR011095 D-alanine--D-alanine ligase, C-terminal E3384_18580 IPR011127 D-alanine--D-alanine ligase, N-terminal domain E3384_18580 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site E3384_18580 IPR013815 ATP-grasp fold, subdomain 1 E3384_18585 IPR005758 UDP-N-acetylmuramate--L-alanine ligase E3384_18585 IPR036565 Mur-like, catalytic domain superfamily E3384_18585 IPR036615 Mur ligase, C-terminal domain superfamily E3384_18585 IPR000713 Mur ligase, N-terminal catalytic domain E3384_18585 IPR004101 Mur ligase, C-terminal E3384_18585 IPR013221 Mur ligase, central E3384_18590 IPR004276 Glycosyltransferase family 28, N-terminal domain E3384_18590 IPR007235 Glycosyl transferase, family 28, C-terminal E3384_18590 IPR006009 N-acetylglucosaminyltransferase, MurG E3384_18595 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site E3384_18595 IPR013437 Probable peptidoglycan glycosyltransferase FtsW E3384_18595 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA E3384_18600 IPR036615 Mur ligase, C-terminal domain superfamily E3384_18600 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase E3384_18600 IPR013221 Mur ligase, central E3384_18600 IPR004101 Mur ligase, C-terminal E3384_18600 IPR036565 Mur-like, catalytic domain superfamily E3384_18605 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site E3384_18605 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase E3384_18605 IPR000715 Glycosyl transferase, family 4 E3384_18610 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase E3384_18610 IPR035911 MurE/MurF, N-terminal E3384_18610 IPR000713 Mur ligase, N-terminal catalytic domain E3384_18610 IPR013221 Mur ligase, central E3384_18610 IPR004101 Mur ligase, C-terminal E3384_18610 IPR036565 Mur-like, catalytic domain superfamily E3384_18610 IPR036615 Mur ligase, C-terminal domain superfamily E3384_18615 IPR035911 MurE/MurF, N-terminal E3384_18615 IPR000713 Mur ligase, N-terminal catalytic domain E3384_18615 IPR004101 Mur ligase, C-terminal E3384_18615 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase E3384_18615 IPR013221 Mur ligase, central E3384_18615 IPR036615 Mur ligase, C-terminal domain superfamily E3384_18615 IPR036565 Mur-like, catalytic domain superfamily E3384_18620 IPR005311 Penicillin-binding protein, dimerisation domain E3384_18620 IPR036138 Penicillin-binding protein, dimerisation domain superfamily E3384_18620 IPR012338 Beta-lactamase/transpeptidase-like E3384_18620 IPR037532 Peptidoglycan D,D-transpeptidase FtsI E3384_18620 IPR001460 Penicillin-binding protein, transpeptidase E3384_18625 IPR011922 Cell division protein FtsL E3384_18630 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily E3384_18630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_18630 IPR002903 Ribosomal RNA small subunit methyltransferase H E3384_18635 IPR037914 SpoVT-AbrB domain superfamily E3384_18635 IPR007159 SpoVT-AbrB domain E3384_18635 IPR035642 MraZ, N-terminal E3384_18635 IPR035644 MraZ, C-terminal E3384_18635 IPR003444 Transcriptional regulator MraZ E3384_18635 IPR038619 MraZ superfamily E3384_18635 IPR020603 MraZ domain E3384_18640 IPR000843 LacI-type HTH domain E3384_18640 IPR012781 D-fructose-responsive transcription factor E3384_18640 IPR001761 Periplasmic binding protein/LacI sugar binding domain E3384_18640 IPR028082 Periplasmic binding protein-like I E3384_18640 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_18645 IPR002912 ACT domain E3384_18645 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal E3384_18645 IPR004789 Acetolactate synthase, small subunit E3384_18645 IPR019455 Acetolactate synthase, small subunit, C-terminal E3384_18645 IPR039557 AHAS, ACT domain E3384_18650 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E3384_18650 IPR000399 TPP-binding enzyme, conserved site E3384_18650 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain E3384_18650 IPR012000 Thiamine pyrophosphate enzyme, central domain E3384_18650 IPR029061 Thiamin diphosphate-binding fold E3384_18650 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_18650 IPR039368 Acetolactate synthase large subunit, TPP binding domain E3384_18650 IPR012846 Acetolactate synthase, large subunit, biosynthetic E3384_18655 IPR036390 Winged helix DNA-binding domain superfamily E3384_18655 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_18655 IPR000847 Transcription regulator HTH, LysR E3384_18655 IPR005119 LysR, substrate-binding E3384_18660 IPR012570 Leucine operon leader peptide E3384_18665 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site E3384_18665 IPR005671 2-isopropylmalate synthase, bacterial-type E3384_18665 IPR000891 Pyruvate carboxyltransferase E3384_18665 IPR013785 Aldolase-type TIM barrel E3384_18665 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily E3384_18665 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain E3384_18670 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site E3384_18670 IPR024084 Isopropylmalate dehydrogenase-like domain E3384_18670 IPR004429 Isopropylmalate dehydrogenase E3384_18675 IPR033941 3-Isopropylmalate dehydratase, catalytic domain E3384_18675 IPR036008 Aconitase, iron-sulfur domain E3384_18675 IPR018136 Aconitase family, 4Fe-4S cluster binding site E3384_18675 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain E3384_18675 IPR004430 3-isopropylmalate dehydratase, large subunit E3384_18675 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 E3384_18680 IPR033940 3-isopropylmalate dehydratase, swivel domain E3384_18680 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain E3384_18680 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel E3384_18680 IPR004431 3-isopropylmalate dehydratase, small subunit E3384_18690 IPR023767 Transcriptional regulator SgrR E3384_18690 IPR036390 Winged helix DNA-binding domain superfamily E3384_18690 IPR039424 Solute-binding protein family 5 E3384_18690 IPR000914 Solute-binding protein family 5 domain E3384_18690 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain E3384_18695 IPR006061 Solute-binding family 1, conserved site E3384_18695 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria E3384_18695 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter E3384_18700 IPR005947 Thiamine ABC transporter, permease protein E3384_18700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_18700 IPR035906 MetI-like superfamily E3384_18705 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ E3384_18705 IPR003593 AAA+ ATPase domain E3384_18705 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_18705 IPR017871 ABC transporter, conserved site E3384_18705 IPR003439 ABC transporter-like E3384_18710 IPR032818 DedA family E3384_18710 IPR032816 SNARE associated Golgi protein E3384_18715 IPR009057 Homeobox-like domain superfamily E3384_18715 IPR037923 Transcription regulator HTH-like E3384_18715 IPR018060 DNA binding HTH domain, AraC-type E3384_18715 IPR020449 Transcription regulator HTH, AraC- type E3384_18715 IPR003313 AraC-type arabinose-binding/dimerisation domain E3384_18715 IPR018062 HTH domain AraC-type, conserved site E3384_18720 IPR005929 Ribulokinase E3384_18720 IPR018485 Carbohydrate kinase, FGGY, C-terminal E3384_18725 IPR038583 L-arabinose isomerase, N-terminal domain superfamily E3384_18725 IPR004216 L-fucose/L-arabinose isomerase, C-terminal E3384_18725 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily E3384_18725 IPR003762 L-arabinose isomerase E3384_18725 IPR024664 L-arabinose isomerase, C-terminal E3384_18730 IPR004661 L-ribulose-5-phosphate 4-epimerase E3384_18730 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD E3384_18730 IPR001303 Class II aldolase/adducin N-terminal E3384_18730 IPR036409 Class II aldolase/adducin N-terminal domain superfamily E3384_18750 IPR023211 DNA polymerase, palm domain superfamily E3384_18750 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain E3384_18750 IPR017964 DNA-directed DNA polymerase, family B, conserved site E3384_18750 IPR006172 DNA-directed DNA polymerase, family B E3384_18750 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain E3384_18750 IPR042087 DNA polymerase family B, C-terminal domain E3384_18750 IPR012337 Ribonuclease H-like superfamily E3384_18750 IPR036397 Ribonuclease H superfamily E3384_18755 IPR000330 SNF2-related, N-terminal domain E3384_18755 IPR038718 SNF2-like, N-terminal domain superfamily E3384_18755 IPR022737 RNA polymerase recycling, bacterial, C-terminal E3384_18755 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_18755 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_18755 IPR001650 Helicase, C-terminal E3384_18755 IPR023949 RNA polymerase-associated protein RapA E3384_18755 IPR040765 RapA, N-terminal Tudor like domain 1 E3384_18755 IPR040766 RapA, N-terminal Tudor-like domain 2 E3384_18760 IPR006225 Pseudouridine synthase, RluC/RluD E3384_18760 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site E3384_18760 IPR006145 Pseudouridine synthase, RsuA/RluA E3384_18760 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_18765 IPR007791 Co-chaperone DjlA, N-terminal E3384_18765 IPR001623 DnaJ domain E3384_18765 IPR036869 Chaperone J-domain superfamily E3384_18765 IPR029024 TerB-like E3384_18765 IPR023749 Co-chaperone DjlA E3384_18770 IPR005653 Organic solvent tolerance-like, N-terminal E3384_18770 IPR020889 LPS-assembly protein LptD E3384_18770 IPR007543 LptD, C-terminal E3384_18775 IPR023034 Peptidyl-prolyl isomerase SurA E3384_18775 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site E3384_18775 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type E3384_18775 IPR027304 Trigger factor/SurA domain superfamily E3384_18775 IPR015391 SurA N-terminal E3384_18780 IPR005255 PdxA family E3384_18780 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase E3384_18785 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site E3384_18785 IPR011530 Ribosomal RNA adenine dimethylase E3384_18785 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm E3384_18785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_18785 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal E3384_18785 IPR023165 rRNA adenine dimethylase-like E3384_18790 IPR007474 ApaG domain E3384_18790 IPR036767 ApaG domain superfamily E3384_18790 IPR023065 Uncharacterised protein family ApaG E3384_18795 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) E3384_18795 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E3384_18795 IPR029052 Metallo-dependent phosphatase-like E3384_18800 IPR001796 Dihydrofolate reductase domain E3384_18800 IPR017925 Dihydrofolate reductase conserved site E3384_18800 IPR024072 Dihydrofolate reductase-like domain superfamily E3384_18800 IPR012259 Dihydrofolate reductase E3384_18805 IPR023941 Glutathione-regulated potassium-efflux system protein KefC E3384_18805 IPR004771 K+/H+ exchanger E3384_18805 IPR006153 Cation/H+ exchanger E3384_18805 IPR006036 Potassium uptake protein TrkA E3384_18805 IPR038770 Sodium/solute symporter superfamily E3384_18805 IPR036291 NAD(P)-binding domain superfamily E3384_18805 IPR003148 Regulator of K+ conductance, N-terminal E3384_18810 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF E3384_18810 IPR029039 Flavoprotein-like superfamily E3384_18810 IPR003680 Flavodoxin-like fold E3384_18835 IPR010305 Protein of unknown function DUF903 E3384_18835 IPR010920 LSM domain superfamily E3384_18840 IPR005828 Major facilitator, sugar transporter-like E3384_18840 IPR020846 Major facilitator superfamily domain E3384_18840 IPR036259 MFS transporter superfamily E3384_18845 IPR012206 Ferredoxin-like, FixX E3384_18850 IPR039651 Protein FixC-like E3384_18850 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_18850 IPR002938 FAD-binding domain E3384_18855 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site E3384_18855 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal E3384_18855 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_18855 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal E3384_18855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_18855 IPR023461 Electron transfer flavoprotein FixB subunit E3384_18855 IPR001308 Electron transfer flavoprotein alpha subunit/FixB E3384_18860 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_18860 IPR023463 Electron transfer flavoprotein, FixA subunit E3384_18860 IPR012255 Electron transfer flavoprotein, beta subunit E3384_18860 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal E3384_18860 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site E3384_18860 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal E3384_18870 IPR000060 BCCT transporter family E3384_18870 IPR018093 BCCT transporter, conserved site E3384_18870 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT E3384_18875 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal E3384_18875 IPR006089 Acyl-CoA dehydrogenase, conserved site E3384_18875 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain E3384_18875 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal E3384_18875 IPR023450 Crotonobetainyl-CoA reductase CaiA E3384_18875 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily E3384_18875 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily E3384_18875 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal E3384_18880 IPR003673 CoA-transferase family III E3384_18880 IPR023452 L-carnitine CoA-transferase CaiB E3384_18880 IPR023606 CoA-transferase family III domain superfamily E3384_18885 IPR000873 AMP-dependent synthetase/ligase E3384_18885 IPR020845 AMP-binding, conserved site E3384_18885 IPR042099 AMP-dependent synthetase-like superfamily E3384_18885 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC E3384_18885 IPR025110 AMP-binding enzyme, C-terminal domain E3384_18890 IPR001753 Enoyl-CoA hydratase/isomerase E3384_18890 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site E3384_18890 IPR022852 Carnitinyl-CoA dehydratase E3384_18890 IPR029045 ClpP/crotonase-like domain superfamily E3384_18890 IPR014748 Enoyl-CoA hydratase, C-terminal E3384_18895 IPR023446 Carnitine operon protein CaiE E3384_18895 IPR011004 Trimeric LpxA-like superfamily E3384_18895 IPR001451 Hexapeptide repeat E3384_18900 IPR020357 Transcription regulator CaiF/GrlA E3384_18900 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_18905 IPR006275 Carbamoyl-phosphate synthase, large subunit E3384_18905 IPR011761 ATP-grasp fold E3384_18905 IPR011607 Methylglyoxal synthase-like domain E3384_18905 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain E3384_18905 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain E3384_18905 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain E3384_18905 IPR036914 Methylglyoxal synthase-like domain superfamily E3384_18905 IPR016185 Pre-ATP-grasp domain superfamily E3384_18905 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily E3384_18905 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain E3384_18910 IPR006274 Carbamoyl-phosphate synthase, small subunit E3384_18910 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain E3384_18910 IPR029062 Class I glutamine amidotransferase-like E3384_18910 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily E3384_18910 IPR017926 Glutamine amidotransferase E3384_18910 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain E3384_18920 IPR000846 Dihydrodipicolinate reductase, N-terminal E3384_18920 IPR022664 Dihydrodipicolinate reductase, conserved site E3384_18920 IPR023940 Dihydrodipicolinate reductase E3384_18920 IPR036291 NAD(P)-binding domain superfamily E3384_18920 IPR022663 Dihydrodipicolinate reductase, C-terminal E3384_18925 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG E3384_18925 IPR002736 Triphosphoribosyl-dephospho-CoA protein E3384_18930 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase E3384_18935 IPR037171 NagB/RpiA transferase-like E3384_18935 IPR006472 Citrate lyase, alpha subunit E3384_18940 IPR005000 HpcH/HpaI aldolase/citrate lyase domain E3384_18940 IPR011206 Citrate lyase beta subunit-like E3384_18940 IPR006475 Citrate lyase, beta subunit, bacteria E3384_18940 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_18940 IPR040442 Pyruvate kinase-like domain superfamily E3384_18945 IPR006495 Citrate lyase acyl carrier protein CitD E3384_18945 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein E3384_18950 IPR000182 GNAT domain E3384_18950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_18950 IPR005216 Citrate lyase ligase E3384_18950 IPR013166 Citrate lyase ligase, C-terminal E3384_18950 IPR004821 Cytidyltransferase-like domain E3384_18950 IPR016181 Acyl-CoA N-acyltransferase E3384_18955 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes E3384_18955 IPR004679 2-hydroxycarboxylate transporter E3384_18960 IPR005899 Sodium ion-translocating decarboxylase E3384_18960 IPR023424 Oxaloacetate decarboxylase gamma chain, probable E3384_18965 IPR000089 Biotin/lipoyl attachment E3384_18965 IPR001882 Biotin-binding site E3384_18965 IPR003379 Carboxylase, conserved domain E3384_18965 IPR005776 Oxaloacetate decarboxylase, alpha subunit E3384_18965 IPR000891 Pyruvate carboxyltransferase E3384_18965 IPR013785 Aldolase-type TIM barrel E3384_18965 IPR011053 Single hybrid motif E3384_18970 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit E3384_18975 IPR003594 Histidine kinase/HSP90-like ATPase E3384_18975 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB E3384_18975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_18975 IPR029151 Periplasmic sensor-like domain superfamily E3384_18975 IPR033463 Single cache domain 3 E3384_18975 IPR035965 PAS domain superfamily E3384_18975 IPR000014 PAS domain E3384_18975 IPR005467 Histidine kinase domain E3384_18975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_18980 IPR001789 Signal transduction response regulator, receiver domain E3384_18980 IPR024187 Signal transduction response regulator, citrate/malate metabolism E3384_18980 IPR011006 CheY-like superfamily E3384_18980 IPR028141 Transcriptional regulator E3384_18985 IPR036452 Ribonucleoside hydrolase-like E3384_18985 IPR022976 Non-specific ribonucleoside hydrolase RihC E3384_18985 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain E3384_18985 IPR023186 Inosine/uridine-preferring nucleoside hydrolase E3384_18995 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase E3384_19000 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain E3384_19005 IPR001872 Peptidase A8, signal peptidase II E3384_19010 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E3384_19010 IPR010663 Zinc finger, FPG/IleRS-type E3384_19010 IPR002301 Isoleucine-tRNA ligase E3384_19010 IPR023585 Isoleucine-tRNA ligase, type 1 E3384_19010 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E3384_19010 IPR002300 Aminoacyl-tRNA synthetase, class Ia E3384_19010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_19010 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain E3384_19010 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding E3384_19010 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain E3384_19015 IPR023468 Riboflavin kinase E3384_19015 IPR002606 Riboflavin kinase, bacterial E3384_19015 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic E3384_19015 IPR023465 Riboflavin kinase domain superfamily E3384_19015 IPR015864 FAD synthetase E3384_19015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_19020 IPR020105 Uncharacterised protein family YaaY E3384_19025 IPR002583 Ribosomal protein S20 E3384_19025 IPR036510 Ribosomal protein S20 superfamily E3384_19030 IPR018043 Sodium:galactoside symporter, conserved site E3384_19030 IPR001927 Sodium:galactoside symporter E3384_19030 IPR036259 MFS transporter superfamily E3384_19030 IPR020846 Major facilitator superfamily domain E3384_19030 IPR039672 Lactose permease-like E3384_19040 IPR036390 Winged helix DNA-binding domain superfamily E3384_19040 IPR000847 Transcription regulator HTH, LysR E3384_19040 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_19040 IPR005119 LysR, substrate-binding E3384_19045 IPR023171 Na/H antiporter domain superfamily E3384_19045 IPR004670 Na+/H+ antiporter NhaA E3384_19060 IPR007197 Radical SAM E3384_19060 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme E3384_19060 IPR013785 Aldolase-type TIM barrel E3384_19060 IPR023885 4Fe4S-binding SPASM domain E3384_19065 IPR024607 Sulfatase, conserved site E3384_19065 IPR017850 Alkaline-phosphatase-like, core domain superfamily E3384_19065 IPR032158 Domain of unknown function DUF4994 E3384_19065 IPR000917 Sulfatase, N-terminal E3384_19075 IPR008334 5'-Nucleotidase, C-terminal E3384_19075 IPR036907 5'-Nucleotidase, C-terminal domain superfamily E3384_19075 IPR006146 5'-Nucleotidase, conserved site E3384_19075 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E3384_19075 IPR029052 Metallo-dependent phosphatase-like E3384_19075 IPR006179 5'-Nucleotidase/apyrase E3384_19090 IPR036390 Winged helix DNA-binding domain superfamily E3384_19090 IPR005119 LysR, substrate-binding E3384_19090 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_19090 IPR000847 Transcription regulator HTH, LysR E3384_19110 IPR008962 PapD-like superfamily E3384_19110 IPR016148 Pili assembly chaperone, C-terminal E3384_19110 IPR018046 Pili assembly chaperone, conserved site E3384_19110 IPR016147 Pili assembly chaperone, N-terminal E3384_19110 IPR013783 Immunoglobulin-like fold E3384_19110 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_19110 IPR001829 Pili assembly chaperone, bacterial E3384_19115 IPR036937 Fimbrial-type adhesion domain superfamily E3384_19115 IPR008966 Adhesion domain superfamily E3384_19115 IPR039458 FimA-like E3384_19120 IPR000259 Fimbrial-type adhesion domain E3384_19120 IPR036937 Fimbrial-type adhesion domain superfamily E3384_19120 IPR008966 Adhesion domain superfamily E3384_19125 IPR036937 Fimbrial-type adhesion domain superfamily E3384_19125 IPR008966 Adhesion domain superfamily E3384_19125 IPR000259 Fimbrial-type adhesion domain E3384_19130 IPR018030 Fimbrial membrane usher, conserved site E3384_19130 IPR037224 PapC, N-terminal domain superfamily E3384_19130 IPR025885 PapC, N-terminal domain E3384_19130 IPR025949 PapC-like, C-terminal domain E3384_19130 IPR042186 Outer membrane usher protein FimD, plug domain E3384_19130 IPR000015 Outer membrane usher protein E3384_19135 IPR013783 Immunoglobulin-like fold E3384_19135 IPR001829 Pili assembly chaperone, bacterial E3384_19135 IPR008962 PapD-like superfamily E3384_19135 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_19135 IPR018046 Pili assembly chaperone, conserved site E3384_19135 IPR016147 Pili assembly chaperone, N-terminal E3384_19135 IPR016148 Pili assembly chaperone, C-terminal E3384_19140 IPR000259 Fimbrial-type adhesion domain E3384_19140 IPR036937 Fimbrial-type adhesion domain superfamily E3384_19140 IPR008966 Adhesion domain superfamily E3384_19155 IPR011583 Chitinase II E3384_19155 IPR029070 Chitinase insertion domain superfamily E3384_19155 IPR001223 Glycoside hydrolase family 18, catalytic domain E3384_19155 IPR017853 Glycoside hydrolase superfamily E3384_19175 IPR036390 Winged helix DNA-binding domain superfamily E3384_19175 IPR000847 Transcription regulator HTH, LysR E3384_19175 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_19175 IPR037416 Nodulation protein D, PBP2 E3384_19175 IPR005119 LysR, substrate-binding E3384_19180 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily E3384_19180 IPR012724 Chaperone DnaJ E3384_19180 IPR018253 DnaJ domain, conserved site E3384_19180 IPR008971 HSP40/DnaJ peptide-binding E3384_19180 IPR001305 Heat shock protein DnaJ, cysteine-rich domain E3384_19180 IPR001623 DnaJ domain E3384_19180 IPR002939 Chaperone DnaJ, C-terminal E3384_19180 IPR036869 Chaperone J-domain superfamily E3384_19185 IPR012725 Chaperone DnaK E3384_19185 IPR018181 Heat shock protein 70, conserved site E3384_19185 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily E3384_19185 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily E3384_19185 IPR013126 Heat shock protein 70 family E3384_19190 IPR020240 Uncharacterised protein family UPF0412, YaaI E3384_19195 IPR025217 Domain of unknown function DUF3944 E3384_19195 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 E3384_19200 IPR000791 Acetate transporter GPR1/FUN34/SatP family E3384_19205 IPR008284 Molybdenum cofactor biosynthesis, conserved site E3384_19205 IPR001453 MoaB/Mog domain E3384_19205 IPR036425 MoaB/Mog-like domain superfamily E3384_19210 IPR018225 Transaldolase, active site E3384_19210 IPR004730 Transaldolase type 1 E3384_19210 IPR001585 Transaldolase/Fructose-6-phosphate aldolase E3384_19210 IPR013785 Aldolase-type TIM barrel E3384_19215 IPR001463 Sodium:alanine symporter E3384_19220 IPR005583 Peroxide stress protein YaaA E3384_19225 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site E3384_19225 IPR037158 Threonine synthase, N-terminal domain superfamily E3384_19225 IPR029144 Threonine synthase, N-terminal E3384_19225 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme E3384_19225 IPR004450 Threonine synthase-like E3384_19225 IPR001926 Pyridoxal-phosphate dependent enzyme E3384_19230 IPR000870 Homoserine kinase E3384_19230 IPR013750 GHMP kinase, C-terminal domain E3384_19230 IPR036554 GHMP kinase, C-terminal domain superfamily E3384_19230 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_19230 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_19230 IPR006204 GHMP kinase N-terminal domain E3384_19230 IPR006203 GHMP kinase, ATP-binding, conserved site E3384_19235 IPR019811 Homoserine dehydrogenase, conserved site E3384_19235 IPR001342 Homoserine dehydrogenase, catalytic E3384_19235 IPR027795 CASTOR, ACT domain E3384_19235 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I E3384_19235 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding E3384_19235 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain E3384_19235 IPR018042 Aspartate kinase, conserved site E3384_19235 IPR001341 Aspartate kinase E3384_19235 IPR036393 Acetylglutamate kinase-like superfamily E3384_19235 IPR002912 ACT domain E3384_19235 IPR036291 NAD(P)-binding domain superfamily E3384_19235 IPR001048 Aspartate/glutamate/uridylate kinase E3384_19240 IPR011720 Thr operon leader peptide E3384_19245 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E3384_19245 IPR001537 tRNA/rRNA methyltransferase, SpoU type E3384_19245 IPR004384 RNA methyltransferase TrmJ/LasT E3384_19245 IPR029028 Alpha/beta knot methyltransferases E3384_19255 IPR011006 CheY-like superfamily E3384_19255 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_19255 IPR016032 Signal transduction response regulator, C-terminal effector E3384_19255 IPR001789 Signal transduction response regulator, receiver domain E3384_19255 IPR039420 Transcriptional regulatory protein WalR-like E3384_19255 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_19265 IPR000595 Cyclic nucleotide-binding domain E3384_19265 IPR018490 Cyclic nucleotide-binding-like E3384_19265 IPR034719 Inhibitor of hydrogen peroxide resistance E3384_19265 IPR041687 IprA, winged helix-turn-helix domain E3384_19275 IPR018046 Pili assembly chaperone, conserved site E3384_19275 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_19275 IPR001829 Pili assembly chaperone, bacterial E3384_19275 IPR016148 Pili assembly chaperone, C-terminal E3384_19275 IPR016147 Pili assembly chaperone, N-terminal E3384_19275 IPR013783 Immunoglobulin-like fold E3384_19275 IPR008962 PapD-like superfamily E3384_19280 IPR018030 Fimbrial membrane usher, conserved site E3384_19280 IPR025949 PapC-like, C-terminal domain E3384_19280 IPR000015 Outer membrane usher protein E3384_19280 IPR042186 Outer membrane usher protein FimD, plug domain E3384_19280 IPR025885 PapC, N-terminal domain E3384_19280 IPR037224 PapC, N-terminal domain superfamily E3384_19295 IPR010364 Uncharacterised protein family, inner membrane CreD E3384_19300 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_19300 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_19300 IPR029151 Periplasmic sensor-like domain superfamily E3384_19300 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_19300 IPR003594 Histidine kinase/HSP90-like ATPase E3384_19300 IPR003660 HAMP domain E3384_19300 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_19300 IPR005467 Histidine kinase domain E3384_19305 IPR011006 CheY-like superfamily E3384_19305 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_19305 IPR016032 Signal transduction response regulator, C-terminal effector E3384_19305 IPR001789 Signal transduction response regulator, receiver domain E3384_19305 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_19305 IPR039420 Transcriptional regulatory protein WalR-like E3384_19310 IPR010292 Uncharacterised protein family CreA E3384_19315 IPR018060 DNA binding HTH domain, AraC-type E3384_19315 IPR009057 Homeobox-like domain superfamily E3384_19315 IPR018062 HTH domain AraC-type, conserved site E3384_19315 IPR011256 Regulatory factor, effector binding domain superfamily E3384_19315 IPR010499 Bacterial transcription activator, effector binding E3384_19315 IPR029442 GyrI-like small molecule binding domain E3384_19315 IPR020449 Transcription regulator HTH, AraC- type E3384_19320 IPR029033 Histidine phosphatase superfamily E3384_19320 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site E3384_19320 IPR013078 Histidine phosphatase superfamily, clade-1 E3384_19320 IPR023086 Phosphoglycerate mutase, GpmB, probable E3384_19325 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 E3384_19325 IPR002786 Inosine/xanthosine triphosphatase E3384_19325 IPR029001 Inosine triphosphate pyrophosphatase-like E3384_19330 IPR000831 Trp repressor E3384_19330 IPR038116 TrpR-like superfamily E3384_19330 IPR013335 Trp repressor, bacterial E3384_19330 IPR010921 Trp repressor/replication initiator E3384_19335 IPR008258 Transglycosylase SLT domain 1 E3384_19335 IPR023346 Lysozyme-like domain superfamily E3384_19335 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily E3384_19335 IPR012289 Lytic transglycosylase, superhelical linker E3384_19335 IPR008939 Lytic transglycosylase, superhelical U-shaped E3384_19335 IPR000189 Prokaryotic transglycosylase, active site E3384_19340 IPR003439 ABC transporter-like E3384_19340 IPR017871 ABC transporter, conserved site E3384_19340 IPR022374 Energy-dependent translational throttle protein EttA E3384_19340 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_19340 IPR003593 AAA+ ATPase domain E3384_19340 IPR032781 ABC-transporter extension domain E3384_19345 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain E3384_19345 IPR004821 Cytidyltransferase-like domain E3384_19345 IPR006417 Nicotinamide-nucleotide adenylyltransferase E3384_19345 IPR038727 NadR/Ttd14, AAA domain E3384_19345 IPR016429 NAD biosynthesis/regulator protein NadR E3384_19345 IPR001387 Cro/C1-type helix-turn-helix domain E3384_19345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_19345 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_19345 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_19350 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain E3384_19350 IPR003593 AAA+ ATPase domain E3384_19350 IPR004504 DNA repair protein RadA E3384_19350 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_19350 IPR041166 LapB, rubredoxin metal binding domain E3384_19350 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_19350 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_19355 IPR041449 Phosphoserine phosphatase, N-terminal E3384_19355 IPR023190 Phosphoserine phosphatase, domain 2 E3384_19355 IPR023214 HAD superfamily E3384_19355 IPR036412 HAD-like superfamily E3384_19360 IPR019305 Uncharacterised protein family Smp E3384_19365 IPR004562 Lipoyltransferase/lipoate-protein ligase E3384_19365 IPR023741 Lipoate-protein ligase A E3384_19365 IPR019491 Lipoate protein ligase, C-terminal E3384_19365 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain E3384_19375 IPR010546 Protein of unknown function DUF1120 E3384_19380 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_19380 IPR013783 Immunoglobulin-like fold E3384_19380 IPR008962 PapD-like superfamily E3384_19380 IPR016147 Pili assembly chaperone, N-terminal E3384_19385 IPR042186 Outer membrane usher protein FimD, plug domain E3384_19385 IPR018030 Fimbrial membrane usher, conserved site E3384_19385 IPR037224 PapC, N-terminal domain superfamily E3384_19385 IPR025885 PapC, N-terminal domain E3384_19385 IPR025949 PapC-like, C-terminal domain E3384_19385 IPR000015 Outer membrane usher protein E3384_19395 IPR035994 Nucleoside phosphorylase superfamily E3384_19395 IPR000845 Nucleoside phosphorylase domain E3384_19395 IPR018016 Nucleoside phosphorylase, conserved site E3384_19395 IPR004402 Purine nucleoside phosphorylase DeoD-type E3384_19400 IPR006124 Metalloenzyme E3384_19400 IPR010045 Phosphopentomutase E3384_19400 IPR017850 Alkaline-phosphatase-like, core domain superfamily E3384_19400 IPR024052 Phosphopentomutase DeoB cap domain superfamily E3384_19405 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily E3384_19405 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal E3384_19405 IPR000312 Glycosyl transferase, family 3 E3384_19405 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic E3384_19405 IPR017459 Glycosyl transferase family 3, N-terminal domain E3384_19405 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily E3384_19405 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily E3384_19405 IPR013465 Thymidine phosphorylase E3384_19405 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase E3384_19405 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site E3384_19410 IPR013785 Aldolase-type TIM barrel E3384_19410 IPR011343 Deoxyribose-phosphate aldolase E3384_19410 IPR002915 DeoC/FbaB/ lacD aldolase E3384_19410 IPR023649 Deoxyribose-phosphate aldolase type II E3384_19415 IPR016905 Glycyl radical enzyme, HI0521, predicted E3384_19420 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW E3384_19420 IPR034457 Organic radical-activating enzymes E3384_19420 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_19420 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_19420 IPR007197 Radical SAM E3384_19420 IPR012839 Organic radical enzyme activase E3384_19420 IPR013785 Aldolase-type TIM barrel E3384_19420 IPR001989 Radical-activating enzyme, conserved site E3384_19425 IPR032466 Metal-dependent hydrolase E3384_19425 IPR001130 TatD family E3384_19425 IPR018228 Deoxyribonuclease, TatD-related, conserved site E3384_19430 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase E3384_19430 IPR037483 YjjU-like E3384_19430 IPR002641 Patatin-like phospholipase domain E3384_19435 IPR009760 Protein of unknown function DUF1328 E3384_19440 IPR014004 Transport-associated and nodulation domain, bacteria E3384_19440 IPR007055 BON domain E3384_19445 IPR009000 Translation protein, beta-barrel domain superfamily E3384_19445 IPR041732 Peptide chain release factor 3, GTP-binding domain E3384_19445 IPR004161 Translation elongation factor EFTu-like, domain 2 E3384_19445 IPR000795 Transcription factor, GTP-binding domain E3384_19445 IPR031157 Tr-type G domain, conserved site E3384_19445 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_19445 IPR004548 Peptide chain release factor 3 E3384_19445 IPR032090 Peptide chain release factor 3, C-terminal E3384_19445 IPR035647 EF-G domain III/V-like E3384_19445 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily E3384_19445 IPR005225 Small GTP-binding protein domain E3384_19450 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB E3384_19450 IPR023198 Phosphoglycolate phosphatase-like, domain 2 E3384_19450 IPR023214 HAD superfamily E3384_19450 IPR041492 Haloacid dehalogenase-like hydrolase E3384_19450 IPR006439 HAD hydrolase, subfamily IA E3384_19450 IPR036412 HAD-like superfamily E3384_19455 IPR000182 GNAT domain E3384_19455 IPR016181 Acyl-CoA N-acyltransferase E3384_19455 IPR006464 N-acetyltransferase RimI/Ard1 E3384_19460 IPR004615 DNA polymerase III, psi subunit E3384_19460 IPR018382 DNA polymerase III, psi subunit, subgroup E3384_19460 IPR036654 DNA polymerase III, psi subunit superfamily E3384_19465 IPR007848 Methyltransferase small domain E3384_19465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_19465 IPR023543 rRNA small subunit methyltransferase C E3384_19465 IPR013675 Methyltransferase small, N-terminal E3384_19465 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_19485 IPR009885 Protein of unknown function DUF1435 E3384_19490 IPR007894 MASE2 E3384_19490 IPR029787 Nucleotide cyclase E3384_19490 IPR000160 GGDEF domain E3384_19495 IPR008090 Ferric iron reductase E3384_19495 IPR024726 Ferric iron reductase, C-terminal E3384_19495 IPR022770 Ferric iron reductase FhuF domain E3384_19500 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily E3384_19500 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain E3384_19505 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_19505 IPR016032 Signal transduction response regulator, C-terminal effector E3384_19505 IPR000792 Transcription regulator LuxR, C-terminal E3384_19510 IPR016032 Signal transduction response regulator, C-terminal effector E3384_19510 IPR000792 Transcription regulator LuxR, C-terminal E3384_19515 IPR010619 Putative threonine/serine exporter E3384_19520 IPR024528 Threonine/Serine exporter, ThrE E3384_19520 IPR020914 Uncharacterised protein family UPF0442 E3384_19525 IPR040480 DnaT, DNA-binding domain E3384_19525 IPR020917 Primosomal protein 1 E3384_19530 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_19530 IPR003593 AAA+ ATPase domain E3384_19530 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein E3384_19530 IPR002611 IstB-like ATP-binding protein E3384_19535 IPR019637 Protein of unknown function DUF2501 E3384_19540 IPR020881 Phosphoglycerol transferase I E3384_19540 IPR017850 Alkaline-phosphatase-like, core domain superfamily E3384_19540 IPR000917 Sulfatase, N-terminal E3384_19545 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain E3384_19545 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding E3384_19545 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily E3384_19545 IPR004090 Chemotaxis methyl-accepting receptor E3384_19545 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site E3384_19545 IPR003660 HAMP domain E3384_19550 IPR003706 CstA, N-terminal domain E3384_19550 IPR025299 CstA, C-terminal domain E3384_19555 IPR007423 Selenoprotein, putative E3384_19560 IPR003495 CobW/HypB/UreG, nucleotide-binding domain E3384_19560 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal E3384_19560 IPR036627 CobW-like, C-terminal domain superfamily E3384_19560 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_19595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_19595 IPR004546 Restriction endonuclease, type I, HsdM E3384_19595 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_19595 IPR003356 DNA methylase, adenine-specific E3384_19595 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily E3384_19595 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain E3384_19605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_19605 IPR003356 DNA methylase, adenine-specific E3384_19605 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily E3384_19610 IPR000055 Restriction endonuclease, type I, HsdS E3384_19615 IPR004473 Restriction endonuclease, type I, HsdR E3384_19615 IPR021810 Protein of unknown function DUF3387 E3384_19615 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal E3384_19615 IPR040980 SWI2/SNF2 ATPase E3384_19615 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_19615 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_19635 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_19635 IPR016161 Aldehyde/histidinol dehydrogenase E3384_19635 IPR015590 Aldehyde dehydrogenase domain E3384_19635 IPR016160 Aldehyde dehydrogenase, cysteine active site E3384_19635 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_19640 IPR010106 Recombination-promoting nuclease RpnA E3384_19640 IPR006842 Transposase (putative), YhgA-like E3384_19645 IPR036259 MFS transporter superfamily E3384_19645 IPR020846 Major facilitator superfamily domain E3384_19645 IPR011701 Major facilitator superfamily E3384_19645 IPR005829 Sugar transporter, conserved site E3384_19650 IPR007383 Protein of unknown function DUF445 E3384_19655 IPR036259 MFS transporter superfamily E3384_19655 IPR010645 Uncharacterised MFS-type transporter YbfB E3384_19660 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain E3384_19665 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain E3384_19670 IPR033826 Isoaspartyl-dipeptidase E3384_19670 IPR006680 Amidohydrolase-related E3384_19670 IPR010229 Peptidase M38, beta-aspartyl dipeptidase E3384_19670 IPR032466 Metal-dependent hydrolase E3384_19670 IPR011059 Metal-dependent hydrolase, composite domain superfamily E3384_19675 IPR036390 Winged helix DNA-binding domain superfamily E3384_19675 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_19675 IPR005119 LysR, substrate-binding E3384_19675 IPR000847 Transcription regulator HTH, LysR E3384_19680 IPR004380 Aspartate racemase E3384_19680 IPR033134 Asp/Glu racemase, active site 2 E3384_19680 IPR001920 Asp/Glu racemase E3384_19680 IPR015942 Asp/Glu/hydantoin racemase E3384_19690 IPR002305 Aminoacyl-tRNA synthetase, class Ic E3384_19690 IPR024109 Tryptophan-tRNA ligase, bacterial-type E3384_19690 IPR002306 Tryptophan-tRNA ligase E3384_19690 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E3384_19690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_19695 IPR011711 GntR, C-terminal E3384_19695 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_19695 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_19695 IPR036390 Winged helix DNA-binding domain superfamily E3384_19695 IPR000524 Transcription regulator HTH, GntR E3384_19700 IPR002925 Dienelactone hydrolase E3384_19700 IPR029058 Alpha/Beta hydrolase fold E3384_19705 IPR003691 Putative fluoride ion transporter CrcB E3384_19705 IPR035923 TT1751-like domain superfamily E3384_19705 IPR005180 Domain of unknown function DUF302 E3384_19725 IPR018654 Putative toxin of bacterial toxin-antitoxin pair E3384_19730 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type E3384_19730 IPR025714 Methyltransferase domain E3384_19730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_19735 IPR029072 YebC-like E3384_19735 IPR026562 Probable transcriptional regulatory protein YeeN E3384_19735 IPR026564 Transcriptional regulator TACO1-like, domain 3 E3384_19735 IPR002876 Transcriptional regulator TACO1-like E3384_19735 IPR017856 Integrase-like, N-terminal E3384_19765 IPR035317 Protein of unknown function DUF5375 E3384_19795 IPR007684 Zinc finger, Ogr/Delta-type E3384_19810 IPR038402 Restriction endonuclease, type II, PvuII superfamily E3384_19810 IPR011335 Restriction endonuclease type II-like E3384_19810 IPR015306 Restriction endonuclease, type II, PvuII E3384_19815 IPR001387 Cro/C1-type helix-turn-helix domain E3384_19815 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_19820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_19820 IPR001091 Restriction/modification DNA-methylase E3384_19820 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site E3384_19820 IPR002941 DNA methylase N-4/N-6 E3384_19825 IPR002104 Integrase, catalytic domain E3384_19825 IPR038488 Integrase, DNA-binding domain superfamily E3384_19825 IPR025166 Integrase, DNA-binding domain E3384_19825 IPR010998 Integrase/recombinase, N-terminal E3384_19825 IPR011010 DNA breaking-rejoining enzyme, catalytic core E3384_19825 IPR013762 Integrase-like, catalytic domain superfamily E3384_19835 IPR013149 Alcohol dehydrogenase, C-terminal E3384_19835 IPR013154 Alcohol dehydrogenase, N-terminal E3384_19835 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site E3384_19835 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 E3384_19835 IPR011032 GroES-like superfamily E3384_19835 IPR036291 NAD(P)-binding domain superfamily E3384_19835 IPR020843 Polyketide synthase, enoylreductase domain E3384_19840 IPR006001 Carbohydrate kinase, thermoresistant glucokinase E3384_19840 IPR031322 Shikimate kinase/gluconokinase E3384_19840 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_19845 IPR013149 Alcohol dehydrogenase, C-terminal E3384_19845 IPR013154 Alcohol dehydrogenase, N-terminal E3384_19845 IPR011032 GroES-like superfamily E3384_19845 IPR036291 NAD(P)-binding domain superfamily E3384_19850 IPR036291 NAD(P)-binding domain superfamily E3384_19850 IPR002347 Short-chain dehydrogenase/reductase SDR E3384_19850 IPR020904 Short-chain dehydrogenase/reductase, conserved site E3384_19855 IPR003474 Gluconate transporter E3384_19860 IPR000843 LacI-type HTH domain E3384_19860 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_19860 IPR028082 Periplasmic binding protein-like I E3384_19865 IPR005495 Permease LptG/LptF-related E3384_19865 IPR030923 LPS export ABC transporter permease LptG E3384_19870 IPR005495 Permease LptG/LptF-related E3384_19870 IPR030922 LPS export ABC transporter permease LptF E3384_19875 IPR023042 Peptidase M17, leucine aminopeptidase E3384_19875 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal E3384_19875 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B E3384_19875 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal E3384_19880 IPR007459 DNA polymerase III chi subunit, HolC E3384_19880 IPR036768 DNA polymerase III subunit chi superfamily E3384_19885 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm E3384_19885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold E3384_19885 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding E3384_19885 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily E3384_19885 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding E3384_19885 IPR002303 Valine-tRNA ligase E3384_19885 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain E3384_19885 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm E3384_19885 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site E3384_19885 IPR033705 Valyl tRNA synthetase, anticodon-binding domain E3384_19885 IPR002300 Aminoacyl-tRNA synthetase, class Ia E3384_19890 IPR010295 Protein of unknown function DUF898 E3384_19895 IPR016181 Acyl-CoA N-acyltransferase E3384_19895 IPR000182 GNAT domain E3384_19905 IPR010386 tRNA-hydroxylase MiaE E3384_19905 IPR009078 Ferritin-like superfamily E3384_19905 IPR012347 Ferritin-like E3384_19910 IPR009671 Regulator of ribonuclease activity B domain E3384_19910 IPR036701 RraB-like superfamily E3384_19910 IPR016716 Regulator of ribonuclease activity B E3384_19915 IPR024904 Ornithine carbamoyltransferase E3384_19915 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily E3384_19915 IPR006130 Aspartate/ornithine carbamoyltransferase E3384_19915 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding E3384_19915 IPR002292 Ornithine/putrescine carbamoyltransferase E3384_19915 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain E3384_19920 IPR037012 YhcH/YjgK/YiaL superfamily E3384_19920 IPR004375 YhcH/YjgK/YiaL family E3384_19925 IPR003876 Arginine deiminase E3384_19930 IPR036393 Acetylglutamate kinase-like superfamily E3384_19930 IPR003964 Carbamate kinase E3384_19930 IPR001048 Aspartate/glutamate/uridylate kinase E3384_19935 IPR024904 Ornithine carbamoyltransferase E3384_19935 IPR002292 Ornithine/putrescine carbamoyltransferase E3384_19935 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily E3384_19935 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain E3384_19935 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding E3384_19935 IPR006130 Aspartate/ornithine carbamoyltransferase E3384_19940 IPR018385 C4-dicarboxylate anaerobic carrier-like E3384_19945 IPR020900 Arginine repressor, DNA-binding domain E3384_19945 IPR020899 Arginine repressor, C-terminal E3384_19945 IPR036251 Arginine repressor, C-terminal domain superfamily E3384_19945 IPR001669 Arginine repressor E3384_19945 IPR036390 Winged helix DNA-binding domain superfamily E3384_19945 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_19955 IPR012602 PyrBI operon leader peptide E3384_19960 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding E3384_19960 IPR002082 Aspartate carbamoyltransferase E3384_19960 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain E3384_19960 IPR006130 Aspartate/ornithine carbamoyltransferase E3384_19960 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily E3384_19965 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily E3384_19965 IPR002801 Aspartate transcarbamylase regulatory subunit E3384_19965 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal E3384_19965 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal E3384_19965 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily E3384_19970 IPR006056 RidA family E3384_19970 IPR019897 RidA, conserved site E3384_19970 IPR035959 RutC-like superfamily E3384_19970 IPR006175 YjgF/YER057c/UK114 family E3384_19975 IPR006068 Cation-transporting P-type ATPase, C-terminal E3384_19975 IPR004014 Cation-transporting P-type ATPase, N-terminal E3384_19975 IPR018303 P-type ATPase, phosphorylation site E3384_19975 IPR001757 P-type ATPase E3384_19975 IPR023298 P-type ATPase, transmembrane domain superfamily E3384_19975 IPR008250 P-type ATPase, A domain superfamily E3384_19975 IPR036412 HAD-like superfamily E3384_19975 IPR023214 HAD superfamily E3384_19975 IPR023299 P-type ATPase, cytoplasmic domain N E3384_19975 IPR006415 P-type ATPase, subfamily IIIB E3384_19980 IPR031434 MgtA leader peptide E3384_19985 IPR000843 LacI-type HTH domain E3384_19985 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_19985 IPR028082 Periplasmic binding protein-like I E3384_19985 IPR012771 Trehalose operon repressor E3384_19990 IPR036878 Glucose permease domain IIB E3384_19990 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site E3384_19990 IPR003352 Phosphotransferase system, EIIC E3384_19990 IPR013013 Phosphotransferase system, EIIC component, type 1 E3384_19990 IPR001996 Phosphotransferase system, IIB component, type 1 E3384_19990 IPR011296 Phosphotransferase system, trehalose-specific IIBC component E3384_19990 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component E3384_19995 IPR013780 Glycosyl hydrolase, all-beta E3384_19995 IPR012769 Trehalose-6-phosphate hydrolase E3384_19995 IPR017853 Glycoside hydrolase superfamily E3384_19995 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) E3384_19995 IPR006047 Glycosyl hydrolase, family 13, catalytic domain E3384_20000 IPR005144 ATP-cone domain E3384_20000 IPR001150 Glycine radical domain E3384_20000 IPR019777 Formate C-acetyltransferase glycine radical, conserved site E3384_20000 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic E3384_20005 IPR034457 Organic radical-activating enzymes E3384_20005 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic E3384_20005 IPR001989 Radical-activating enzyme, conserved site E3384_20005 IPR013785 Aldolase-type TIM barrel E3384_20010 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family E3384_20010 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily E3384_20015 IPR007337 RelB antitoxin/Antitoxin DinJ E3384_20015 IPR013321 Arc-type ribbon-helix-helix E3384_20020 IPR013196 Helix-turn-helix, type 11 E3384_20020 IPR007737 Mga helix-turn-helix domain E3384_20020 IPR036634 PRD domain superfamily E3384_20020 IPR016152 Phosphotransferase/anion transporter E3384_20020 IPR002178 PTS EIIA type-2 domain E3384_20020 IPR036095 PTS system IIB component-like superfamily E3384_20020 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_20020 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_20020 IPR036390 Winged helix DNA-binding domain superfamily E3384_20020 IPR011608 PRD domain E3384_20025 IPR013785 Aldolase-type TIM barrel E3384_20025 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase E3384_20030 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like E3384_20030 IPR015424 Pyridoxal phosphate-dependent transferase E3384_20030 IPR018319 L-seryl-tRNA selenium transferase-like E3384_20030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_20035 IPR011059 Metal-dependent hydrolase, composite domain superfamily E3384_20035 IPR032466 Metal-dependent hydrolase E3384_20035 IPR006680 Amidohydrolase-related E3384_20035 IPR020043 Deacetylase Atu3266-like E3384_20065 IPR010980 Cytochrome c/b562 E3384_20065 IPR009155 Cytochrome b562 E3384_20070 IPR036059 Metalloprotease TldD/PmbA superfamily E3384_20070 IPR002510 Metalloprotease TldD/PmbA E3384_20070 IPR035068 Metalloprotease TldD/PmbA, N-terminal E3384_20075 IPR006839 Ribosome-associated, YjgA E3384_20075 IPR023153 PSPTO4464-like domain superfamily E3384_20080 IPR013022 Xylose isomerase-like, TIM barrel domain E3384_20080 IPR036237 Xylose isomerase-like superfamily E3384_20090 IPR011701 Major facilitator superfamily E3384_20090 IPR020846 Major facilitator superfamily domain E3384_20090 IPR036259 MFS transporter superfamily E3384_20090 IPR004748 Polyol permease E3384_20095 IPR036291 NAD(P)-binding domain superfamily E3384_20095 IPR030827 Inositol 2-dehydrogenase E3384_20095 IPR004104 Oxidoreductase, C-terminal E3384_20095 IPR000683 Oxidoreductase, N-terminal E3384_20100 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase E3384_20100 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes E3384_20100 IPR029061 Thiamin diphosphate-binding fold E3384_20100 IPR012000 Thiamine pyrophosphate enzyme, central domain E3384_20100 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain E3384_20100 IPR000399 TPP-binding enzyme, conserved site E3384_20100 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E3384_20100 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_20105 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily E3384_20105 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_20105 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes E3384_20105 IPR029056 Ribokinase-like E3384_20105 IPR011611 Carbohydrate kinase PfkB E3384_20105 IPR030830 5-Dehydro-2-deoxygluconokinase E3384_20110 IPR037541 Uncharacterized MFS-type transporter YfcJ E3384_20110 IPR036259 MFS transporter superfamily E3384_20110 IPR011701 Major facilitator superfamily E3384_20110 IPR020846 Major facilitator superfamily domain E3384_20115 IPR013022 Xylose isomerase-like, TIM barrel domain E3384_20115 IPR036237 Xylose isomerase-like superfamily E3384_20120 IPR017853 Glycoside hydrolase superfamily E3384_20120 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain E3384_20120 IPR001139 Glycoside hydrolase family 30 E3384_20120 IPR013780 Glycosyl hydrolase, all-beta E3384_20125 IPR036291 NAD(P)-binding domain superfamily E3384_20125 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase E3384_20125 IPR000683 Oxidoreductase, N-terminal E3384_20125 IPR004104 Oxidoreductase, C-terminal E3384_20130 IPR030823 IolE/MocC family E3384_20130 IPR036237 Xylose isomerase-like superfamily E3384_20130 IPR013022 Xylose isomerase-like, TIM barrel domain E3384_20130 IPR023952 Inosose dehydratase E3384_20145 IPR015590 Aldehyde dehydrogenase domain E3384_20145 IPR016160 Aldehyde dehydrogenase, cysteine active site E3384_20145 IPR016162 Aldehyde dehydrogenase, N-terminal E3384_20145 IPR016163 Aldehyde dehydrogenase, C-terminal E3384_20145 IPR016161 Aldehyde/histidinol dehydrogenase E3384_20145 IPR010061 Methylmalonate-semialdehyde dehydrogenase E3384_20150 IPR011051 RmlC-like cupin domain superfamily E3384_20150 IPR021120 KduI/IolB isomerase E3384_20150 IPR024203 5-deoxy-glucuronate isomerase, IolB E3384_20150 IPR023770 5-deoxy-glucuronate isomerase, Bacilli E3384_20150 IPR014710 RmlC-like jelly roll fold E3384_20155 IPR003663 Sugar/inositol transporter E3384_20155 IPR005829 Sugar transporter, conserved site E3384_20155 IPR036259 MFS transporter superfamily E3384_20155 IPR005828 Major facilitator, sugar transporter-like E3384_20155 IPR020846 Major facilitator superfamily domain E3384_20160 IPR005829 Sugar transporter, conserved site E3384_20160 IPR003663 Sugar/inositol transporter E3384_20160 IPR036259 MFS transporter superfamily E3384_20160 IPR005828 Major facilitator, sugar transporter-like E3384_20160 IPR020846 Major facilitator superfamily domain E3384_20165 IPR000281 Helix-turn-helix protein RpiR E3384_20165 IPR035472 RpiR-like, SIS domain E3384_20165 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_20165 IPR003836 Glucokinase E3384_20165 IPR001347 Sugar isomerase (SIS) E3384_20165 IPR009057 Homeobox-like domain superfamily E3384_20170 IPR013221 Mur ligase, central E3384_20170 IPR036615 Mur ligase, C-terminal domain superfamily E3384_20170 IPR004101 Mur ligase, C-terminal E3384_20170 IPR000713 Mur ligase, N-terminal catalytic domain E3384_20170 IPR036565 Mur-like, catalytic domain superfamily E3384_20170 IPR005757 Murein peptide ligase E3384_20175 IPR020548 Fructose-1,6-bisphosphatase, active site E3384_20175 IPR028343 Fructose-1,6-bisphosphatase E3384_20175 IPR000146 Fructose-1,6-bisphosphatase class 1 E3384_20175 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal E3384_20180 IPR036649 Inorganic pyrophosphatase superfamily E3384_20180 IPR008162 Inorganic pyrophosphatase E3384_20185 IPR020043 Deacetylase Atu3266-like E3384_20185 IPR011059 Metal-dependent hydrolase, composite domain superfamily E3384_20185 IPR032466 Metal-dependent hydrolase E3384_20185 IPR006680 Amidohydrolase-related E3384_20190 IPR000849 Sugar phosphate transporter E3384_20190 IPR020846 Major facilitator superfamily domain E3384_20190 IPR011701 Major facilitator superfamily E3384_20190 IPR036259 MFS transporter superfamily E3384_20195 IPR013024 Gamma-glutamyl cyclotransferase-like E3384_20195 IPR039126 Gamma-glutamylaminecyclotransferase E3384_20195 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like E3384_20195 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily E3384_20200 IPR007452 Translocation and assembly module TamB E3384_20205 IPR000184 Bacterial surface antigen (D15) E3384_20205 IPR010827 POTRA domain, BamA/TamA-like E3384_20205 IPR039910 Surface antigen D15-like E3384_20205 IPR034746 POTRA domain E3384_20205 IPR035243 TamA, POTRA domain 1 E3384_20210 IPR002569 Peptide methionine sulphoxide reductase MsrA E3384_20210 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily E3384_20215 IPR005170 Transporter-associated domain E3384_20215 IPR016169 FAD-binding, type PCMH, subdomain 2 E3384_20215 IPR002550 CNNM, transmembrane domain E3384_20215 IPR000644 CBS domain E3384_20215 IPR036318 FAD-binding, type PCMH-like superfamily E3384_20220 IPR009491 Protein of unknown function DUF1107 E3384_20225 IPR006513 Conserved hypothetical protein CHP01626, YtfJ E3384_20230 IPR020550 Inositol monophosphatase, conserved site E3384_20230 IPR000760 Inositol monophosphatase-like E3384_20230 IPR020583 Inositol monophosphatase, metal-binding site E3384_20230 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ E3384_20235 IPR029052 Metallo-dependent phosphatase-like E3384_20235 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase E3384_20235 IPR041827 CpdB, N-terminal metallophosphatase domain E3384_20235 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E3384_20235 IPR006179 5'-Nucleotidase/apyrase E3384_20235 IPR006146 5'-Nucleotidase, conserved site E3384_20235 IPR036907 5'-Nucleotidase, C-terminal domain superfamily E3384_20235 IPR008334 5'-Nucleotidase, C-terminal E3384_20240 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_20240 IPR036390 Winged helix DNA-binding domain superfamily E3384_20240 IPR002577 Helix-turn-helix, HxlR type E3384_20245 IPR008030 NmrA-like domain E3384_20245 IPR036291 NAD(P)-binding domain superfamily E3384_20250 IPR000620 EamA domain E3384_20255 IPR023742 Iron-sulfur cluster repair protein YftE E3384_20255 IPR012312 Haemerythrin-like E3384_20255 IPR019903 Repair of iron centres family E3384_20260 IPR004840 Amino acid permease, conserved site E3384_20260 IPR004841 Amino acid permease/ SLC12A domain E3384_20265 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain E3384_20265 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal E3384_20265 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily E3384_20270 IPR013731 Opacity-associated protein A, N-terminal E3384_20270 IPR007340 Opacity-associated protein A E3384_20280 IPR036791 Ribosomal protein L9, C-terminal domain superfamily E3384_20280 IPR009027 Ribosomal protein L9/RNase H1, N-terminal E3384_20280 IPR036935 Ribosomal protein L9, N-terminal domain superfamily E3384_20280 IPR020070 Ribosomal protein L9, N-terminal E3384_20280 IPR020594 Ribosomal protein L9, bacteria/chloroplast E3384_20280 IPR020069 Ribosomal protein L9, C-terminal E3384_20280 IPR000244 Ribosomal protein L9 E3384_20285 IPR001648 Ribosomal protein S18 E3384_20285 IPR036870 Ribosomal protein S18 superfamily E3384_20285 IPR018275 Ribosomal protein S18, conserved site E3384_20290 IPR023646 Primosomal replication protein PriB E3384_20290 IPR000424 Primosome PriB/single-strand DNA-binding E3384_20290 IPR012340 Nucleic acid-binding, OB-fold E3384_20295 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 E3384_20295 IPR035980 Ribosomal protein S6 superfamily E3384_20295 IPR020814 Ribosomal protein S6, plastid/chloroplast E3384_20295 IPR020815 Ribosomal protein S6, conserved site E3384_20295 IPR000529 Ribosomal protein S6 E3384_20310 IPR025543 Dodecin-like E3384_20310 IPR036275 YdgH-like superfamily E3384_20310 IPR010854 Domain of unknown function DUF1471 E3384_20315 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF E3384_20315 IPR036409 Class II aldolase/adducin N-terminal domain superfamily E3384_20315 IPR001303 Class II aldolase/adducin N-terminal E3384_20320 IPR013022 Xylose isomerase-like, TIM barrel domain E3384_20320 IPR036237 Xylose isomerase-like superfamily E3384_20320 IPR023492 L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae E3384_20320 IPR004560 L-ribulose-5-phosphate 3-epimerase E3384_20325 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD E3384_20325 IPR013785 Aldolase-type TIM barrel E3384_20325 IPR041710 HPS/KGPDC domain E3384_20325 IPR011060 Ribulose-phosphate binding barrel E3384_20325 IPR001754 Orotidine 5'-phosphate decarboxylase domain E3384_20330 IPR002178 PTS EIIA type-2 domain E3384_20330 IPR016152 Phosphotransferase/anion transporter E3384_20335 IPR036095 PTS system IIB component-like superfamily E3384_20335 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_20335 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_20340 IPR004703 Phosphotransferase system, sugar-specific permease component E3384_20345 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like E3384_20345 IPR023951 L-ascorbate-6-phosphate lactonase UlaG E3384_20350 IPR023711 Transcription regulator HTH, UlaR E3384_20350 IPR036390 Winged helix DNA-binding domain superfamily E3384_20350 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_20350 IPR037171 NagB/RpiA transferase-like E3384_20350 IPR001034 DeoR-type HTH domain E3384_20350 IPR014036 DeoR C-terminal sensor domain E3384_20355 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain E3384_20355 IPR029058 Alpha/Beta hydrolase fold E3384_20360 IPR036275 YdgH-like superfamily E3384_20360 IPR010854 Domain of unknown function DUF1471 E3384_20360 IPR025543 Dodecin-like E3384_20365 IPR036275 YdgH-like superfamily E3384_20365 IPR010854 Domain of unknown function DUF1471 E3384_20365 IPR025543 Dodecin-like E3384_20370 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal E3384_20370 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily E3384_20370 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal E3384_20370 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain E3384_20370 IPR006089 Acyl-CoA dehydrogenase, conserved site E3384_20370 IPR041504 Adaptive response protein AidB, N-terminal E3384_20370 IPR034184 Putative acyl-CoA dehydrogenase AidB E3384_20375 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain E3384_20375 IPR016185 Pre-ATP-grasp domain superfamily E3384_20380 IPR009576 Biofilm formation YgiB E3384_20385 IPR007140 Protein of unknown function DUF350 E3384_20390 IPR019621 Protein of unknown function DUF2491 E3384_20400 IPR007157 PspA/IM30 E3384_20405 IPR019231 Protein of unknown function DUF2170 E3384_20410 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal E3384_20410 IPR013123 RNA 2-O ribose methyltransferase, substrate binding E3384_20410 IPR001537 tRNA/rRNA methyltransferase, SpoU type E3384_20410 IPR004441 RNA methyltransferase TrmH family E3384_20410 IPR029028 Alpha/beta knot methyltransferases E3384_20410 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB E3384_20410 IPR029064 50S ribosomal protein L30e-like E3384_20415 IPR022967 RNA-binding domain, S1 E3384_20415 IPR013668 Ribonuclease R winged-helix domain E3384_20415 IPR013223 Ribonuclease B, N-terminal OB domain E3384_20415 IPR011129 Cold shock domain E3384_20415 IPR011805 Ribonuclease R E3384_20415 IPR004476 Ribonuclease II/ribonuclease R E3384_20415 IPR040476 RNase II/RNase R, cold shock domain E3384_20415 IPR001900 Ribonuclease II/R E3384_20415 IPR003029 S1 domain E3384_20415 IPR022966 Ribonuclease II/R, conserved site E3384_20415 IPR012340 Nucleic acid-binding, OB-fold E3384_20420 IPR036390 Winged helix DNA-binding domain superfamily E3384_20420 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_20420 IPR000944 Transcription regulator Rrf2-type E3384_20420 IPR023761 Transcriptional repressor HTH, NsrR E3384_20425 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_20425 IPR042109 Adenylosuccinate synthetase, domain 1 E3384_20425 IPR001114 Adenylosuccinate synthetase E3384_20425 IPR042110 Adenylosuccinate synthetase, domain 2 E3384_20425 IPR033128 Adenylosuccinate synthase, active site E3384_20425 IPR018220 Adenylosuccinate synthase, GTP-binding site E3384_20425 IPR042111 Adenylosuccinate synthetase, domain 3 E3384_20430 IPR019201 Protein of unknown function DUF2065 E3384_20435 IPR036013 Band 7/SPFH domain superfamily E3384_20435 IPR001107 Band 7 domain E3384_20435 IPR010200 HflC E3384_20440 IPR036013 Band 7/SPFH domain superfamily E3384_20440 IPR020980 Menbrane protein HflK, N-terminal E3384_20440 IPR001107 Band 7 domain E3384_20440 IPR010201 HflK E3384_20440 IPR001972 Stomatin family E3384_20445 IPR006073 GTP binding domain E3384_20445 IPR032305 GTP-binding protein, middle domain E3384_20445 IPR030394 HflX-type guanine nucleotide-binding (G) domain E3384_20445 IPR035647 EF-G domain III/V-like E3384_20445 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_20445 IPR025121 GTPase HflX, N-terminal E3384_20445 IPR042108 GTPase HflX, N-terminal domain superfamily E3384_20445 IPR016496 GTPase HflX E3384_20450 IPR005001 RNA-binding protein Hfq E3384_20450 IPR010920 LSM domain superfamily E3384_20455 IPR039657 Dimethylallyltransferase E3384_20455 IPR018022 IPP transferase E3384_20455 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_20460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_20460 IPR014762 DNA mismatch repair, conserved site E3384_20460 IPR002099 DNA mismatch repair protein family, N-terminal E3384_20460 IPR013507 DNA mismatch repair protein, S5 domain 2-like E3384_20460 IPR020667 DNA mismatch repair protein, MutL E3384_20460 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms E3384_20460 IPR014790 MutL, C-terminal, dimerisation E3384_20460 IPR042120 MutL, C-terminal domain, dimerisation subdomain E3384_20460 IPR042121 MutL, C-terminal domain, regulatory subdomain E3384_20460 IPR037198 MutL, C-terminal domain superfamily E3384_20460 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_20460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_20465 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain E3384_20470 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_20470 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE E3384_20475 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase E3384_20475 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr E3384_20475 IPR029056 Ribokinase-like E3384_20475 IPR004443 YjeF N-terminal domain E3384_20475 IPR036652 YjeF N-terminal domain superfamily E3384_20475 IPR017953 Carbohydrate kinase, predicted, conserved site E3384_20480 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_20480 IPR013542 Domain of unknown function DUF1730 E3384_20480 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_20480 IPR004453 Epoxyqueuosine reductase QueG E3384_20500 IPR001320 Ionotropic glutamate receptor E3384_20500 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter E3384_20500 IPR018313 Solute-binding protein family 3, conserved site E3384_20500 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF E3384_20505 IPR012337 Ribonuclease H-like superfamily E3384_20505 IPR036397 Ribonuclease H superfamily E3384_20505 IPR013520 Exonuclease, RNase T/DNA polymerase III E3384_20505 IPR022894 Oligoribonuclease E3384_20510 IPR010914 RsgA GTPase domain E3384_20510 IPR004881 Ribosome biogenesis GTPase RsgA E3384_20510 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_20510 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain E3384_20515 IPR033177 Phosphatidylserine decarboxylase E3384_20515 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 E3384_20515 IPR003817 Phosphatidylserine decarboxylase-related E3384_20520 IPR010920 LSM domain superfamily E3384_20520 IPR023408 Mechanosensitive ion channel MscS domain superfamily E3384_20520 IPR006686 Mechanosensitive ion channel MscS, conserved site E3384_20520 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 E3384_20520 IPR024393 Mechanosensitive ion channel MscS, porin domain E3384_20520 IPR006685 Mechanosensitive ion channel MscS E3384_20520 IPR011066 Mechanosensitive ion channel MscS, C-terminal E3384_20520 IPR025692 Mechanosensitive ion channel inner membrane domain 1 E3384_20525 IPR022553 Protein of unknown function DUF2645 E3384_20530 IPR002293 Amino acid/polyamine transporter I E3384_20535 IPR004525 Elongation factor P--(R)-beta-lysine ligase E3384_20535 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_20535 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) E3384_20535 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal E3384_20540 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily E3384_20540 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily E3384_20540 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain E3384_20540 IPR005884 Fumarate reductase, flavoprotein subunit E3384_20540 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal E3384_20540 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_20540 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit E3384_20540 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site E3384_20545 IPR036010 2Fe-2S ferredoxin-like superfamily E3384_20545 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site E3384_20545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_20545 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_20545 IPR012675 Beta-grasp domain superfamily E3384_20545 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein E3384_20545 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal E3384_20545 IPR009051 Alpha-helical ferredoxin E3384_20545 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain E3384_20550 IPR003510 Fumarate reductase, subunit C E3384_20550 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit E3384_20555 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit E3384_20555 IPR003418 Fumarate reductase, subunit D E3384_20560 IPR022272 Lipocalin family conserved site E3384_20560 IPR012674 Calycin E3384_20560 IPR022271 Lipocalin, ApoD type E3384_20560 IPR002446 Lipocalin, bacterial E3384_20560 IPR000566 Lipocalin/cytosolic fatty-acid binding domain E3384_20565 IPR000390 Small multidrug resistance protein family E3384_20570 IPR000792 Transcription regulator LuxR, C-terminal E3384_20570 IPR001789 Signal transduction response regulator, receiver domain E3384_20570 IPR016032 Signal transduction response regulator, C-terminal effector E3384_20575 IPR012556 Entericidin A/B E3384_20580 IPR012556 Entericidin A/B E3384_20585 IPR020599 Translation elongation factor P/YeiP E3384_20585 IPR015365 Elongation factor P, C-terminal E3384_20585 IPR012340 Nucleic acid-binding, OB-fold E3384_20585 IPR014722 Ribosomal protein L2, domain 2 E3384_20585 IPR013185 Translation elongation factor, KOW-like E3384_20585 IPR001059 Translation elongation factor P/YeiP, central E3384_20585 IPR013852 Translation elongation factor P/YeiP, conserved site E3384_20585 IPR011768 Translation elongation factor P E3384_20585 IPR008991 Translation protein SH3-like domain superfamily E3384_20590 IPR022462 Lysine-2,3-aminomutase-like E3384_20590 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase E3384_20590 IPR007197 Radical SAM E3384_20590 IPR013785 Aldolase-type TIM barrel E3384_20595 IPR031810 YjeJ-like E3384_20600 IPR025294 Protein of unknown function DUF4156 E3384_20605 IPR018370 Chaperonin Cpn60, conserved site E3384_20605 IPR027410 TCP-1-like chaperonin intermediate domain superfamily E3384_20605 IPR001844 Chaperonin Cpn60 E3384_20605 IPR002423 Chaperonin Cpn60/TCP-1 family E3384_20605 IPR027409 GroEL-like apical domain superfamily E3384_20605 IPR027413 GroEL-like equatorial domain superfamily E3384_20610 IPR020818 GroES chaperonin family E3384_20610 IPR037124 GroES chaperonin superfamily E3384_20610 IPR018369 Chaperonin GroES, conserved site E3384_20610 IPR011032 GroES-like superfamily E3384_20615 IPR002293 Amino acid/polyamine transporter I E3384_20620 IPR007313 FxsA cytoplasmic membrane protein E3384_20625 IPR004708 Aspartate ammonia-lyase E3384_20625 IPR024083 Fumarase/histidase, N-terminal E3384_20625 IPR018951 Fumarase C, C-terminal E3384_20625 IPR020557 Fumarate lyase, conserved site E3384_20625 IPR000362 Fumarate lyase family E3384_20625 IPR022761 Fumarate lyase, N-terminal E3384_20625 IPR008948 L-Aspartase-like E3384_20630 IPR004668 Anaerobic c4-dicarboxylate membrane transporter E3384_20635 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria E3384_20635 IPR004323 Divalent ion tolerance protein, CutA E3384_20635 IPR011322 Nitrogen regulatory PII-like, alpha/beta E3384_20635 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal E3384_20640 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain E3384_20640 IPR003834 Cytochrome C biogenesis protein, transmembrane domain E3384_20640 IPR022910 Thiol:disulphide interchange protein DsbD E3384_20640 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily E3384_20640 IPR036249 Thioredoxin-like superfamily E3384_20640 IPR017937 Thioredoxin, conserved site E3384_20640 IPR013766 Thioredoxin domain E3384_20640 IPR035671 DsbD gamma E3384_20645 IPR001647 DNA-binding HTH domain, TetR-type E3384_20645 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily E3384_20645 IPR009057 Homeobox-like domain superfamily E3384_20660 IPR001011 Acid phosphatase, class A, bacterial E3384_20660 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase E3384_20660 IPR018296 Acid phosphatase, class A, bacterial, conserved site E3384_20660 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily E3384_20665 IPR011042 Six-bladed beta-propeller, TolB-like E3384_20665 IPR009722 SdiA-regulated E3384_20690 IPR003467 Fimbrial, major/minor subunit E3384_20705 IPR018046 Pili assembly chaperone, conserved site E3384_20705 IPR016147 Pili assembly chaperone, N-terminal E3384_20705 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_20705 IPR008962 PapD-like superfamily E3384_20705 IPR013783 Immunoglobulin-like fold E3384_20705 IPR001829 Pili assembly chaperone, bacterial E3384_20710 IPR018030 Fimbrial membrane usher, conserved site E3384_20710 IPR037224 PapC, N-terminal domain superfamily E3384_20710 IPR025885 PapC, N-terminal domain E3384_20710 IPR042186 Outer membrane usher protein FimD, plug domain E3384_20710 IPR000015 Outer membrane usher protein E3384_20715 IPR008966 Adhesion domain superfamily E3384_20715 IPR016372 K88 fimbrial protein A E3384_20715 IPR036937 Fimbrial-type adhesion domain superfamily E3384_20720 IPR004356 Adhesin operon regulatory protein E3384_20750 IPR018060 DNA binding HTH domain, AraC-type E3384_20750 IPR018062 HTH domain AraC-type, conserved site E3384_20750 IPR009057 Homeobox-like domain superfamily E3384_20750 IPR020449 Transcription regulator HTH, AraC- type E3384_20755 IPR030864 Transcriptional regulatory protein RcsB E3384_20755 IPR016032 Signal transduction response regulator, C-terminal effector E3384_20755 IPR001789 Signal transduction response regulator, receiver domain E3384_20755 IPR011006 CheY-like superfamily E3384_20755 IPR000792 Transcription regulator LuxR, C-terminal E3384_20755 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_20770 IPR011042 Six-bladed beta-propeller, TolB-like E3384_20770 IPR009722 SdiA-regulated E3384_20780 IPR020945 DMSO/Nitrate reductase chaperone E3384_20780 IPR026269 Tat proofreading chaperone DmsD-type E3384_20780 IPR028611 Tat proofreading chaperone DmsD E3384_20780 IPR036411 TorD-like superfamily E3384_20785 IPR007059 DMSO reductase anchor subunit (DmsC) E3384_20790 IPR014297 Dimethylsulphoxide reductase, chain B E3384_20790 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_20790 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_20795 IPR009010 Aspartate decarboxylase-like domain superfamily E3384_20795 IPR006657 Molybdopterin dinucleotide-binding domain E3384_20795 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE E3384_20795 IPR006656 Molybdopterin oxidoreductase E3384_20795 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_20795 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site E3384_20795 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site E3384_20795 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_20795 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain E3384_20800 IPR000014 PAS domain E3384_20800 IPR005467 Histidine kinase domain E3384_20800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_20800 IPR003594 Histidine kinase/HSP90-like ATPase E3384_20800 IPR033463 Single cache domain 3 E3384_20800 IPR029151 Periplasmic sensor-like domain superfamily E3384_20800 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB E3384_20800 IPR039506 SpoOB, alpha-helical domain E3384_20800 IPR035965 PAS domain superfamily E3384_20800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_20800 IPR013767 PAS fold E3384_20805 IPR001789 Signal transduction response regulator, receiver domain E3384_20805 IPR024187 Signal transduction response regulator, citrate/malate metabolism E3384_20805 IPR011006 CheY-like superfamily E3384_20815 IPR004668 Anaerobic c4-dicarboxylate membrane transporter E3384_20820 IPR020557 Fumarate lyase, conserved site E3384_20820 IPR011167 Iron-dependent fumarate hydratase E3384_20820 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily E3384_20820 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain E3384_20820 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain E3384_20825 IPR039672 Lactose permease-like E3384_20825 IPR036259 MFS transporter superfamily E3384_20825 IPR001927 Sodium:galactoside symporter E3384_20825 IPR018043 Sodium:galactoside symporter, conserved site E3384_20830 IPR019802 Glycoside hydrolase, family 4, conserved site E3384_20830 IPR022616 Glycosyl hydrolase, family 4, C-terminal E3384_20830 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal E3384_20830 IPR001088 Glycoside hydrolase, family 4 E3384_20830 IPR036291 NAD(P)-binding domain superfamily E3384_20835 IPR020449 Transcription regulator HTH, AraC- type E3384_20835 IPR018060 DNA binding HTH domain, AraC-type E3384_20835 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily E3384_20835 IPR018062 HTH domain AraC-type, conserved site E3384_20835 IPR014710 RmlC-like jelly roll fold E3384_20835 IPR009057 Homeobox-like domain superfamily E3384_20835 IPR011051 RmlC-like cupin domain superfamily E3384_20840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_20840 IPR000310 Orn/Lys/Arg decarboxylase, major domain E3384_20840 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily E3384_20840 IPR015424 Pyridoxal phosphate-dependent transferase E3384_20840 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_20840 IPR011193 Ornithine/lysine/arginine decarboxylase E3384_20840 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal E3384_20840 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal E3384_20845 IPR009057 Homeobox-like domain superfamily E3384_20845 IPR018060 DNA binding HTH domain, AraC-type E3384_20845 IPR020449 Transcription regulator HTH, AraC- type E3384_20845 IPR018062 HTH domain AraC-type, conserved site E3384_20850 IPR002293 Amino acid/polyamine transporter I E3384_20855 IPR040423 Phosphoethanolamine transferase E3384_20855 IPR017850 Alkaline-phosphatase-like, core domain superfamily E3384_20855 IPR012549 Phosphoethanolamine transferase, N-terminal E3384_20855 IPR000917 Sulfatase, N-terminal E3384_20860 IPR011006 CheY-like superfamily E3384_20860 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_20860 IPR001789 Signal transduction response regulator, receiver domain E3384_20860 IPR016032 Signal transduction response regulator, C-terminal effector E3384_20860 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_20860 IPR039420 Transcriptional regulatory protein WalR-like E3384_20865 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_20865 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_20865 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_20865 IPR005467 Histidine kinase domain E3384_20865 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_20865 IPR003594 Histidine kinase/HSP90-like ATPase E3384_20865 IPR003660 HAMP domain E3384_20875 IPR005829 Sugar transporter, conserved site E3384_20875 IPR036292 Proline/betaine transporter ProP, C-terminal E3384_20875 IPR036259 MFS transporter superfamily E3384_20875 IPR004736 MFS transporter, metabolite:H symporter E3384_20875 IPR005828 Major facilitator, sugar transporter-like E3384_20875 IPR020846 Major facilitator superfamily domain E3384_20875 IPR015041 Osmosensory transporter coiled coil E3384_20880 IPR004624 PhnA protein E3384_20880 IPR013988 PhnA protein, C-terminal E3384_20880 IPR013987 PhnA protein, N-terminal E3384_20885 IPR028973 PhnB-like E3384_20885 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase E3384_20890 IPR000182 GNAT domain E3384_20890 IPR016181 Acyl-CoA N-acyltransferase E3384_20905 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_20905 IPR006597 Sel1-like repeat E3384_20910 IPR018107 Sodium:dicarboxylate symporter, conserved site E3384_20910 IPR036458 Sodium:dicarboxylate symporter superfamily E3384_20910 IPR001991 Sodium:dicarboxylate symporter E3384_20910 IPR033380 Glutamate-aspartate symport protein GltP/GltT E3384_20910 IPR034703 Proton/glutamate-aspartate symporter GltP E3384_20915 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_20915 IPR019734 Tetratricopeptide repeat E3384_20915 IPR013026 Tetratricopeptide repeat-containing domain E3384_20920 IPR005616 CcmH/CycL/Ccl2/NrfF family E3384_20920 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily E3384_20920 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF E3384_20925 IPR002541 Cytochrome c assembly protein E3384_20925 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal E3384_20925 IPR003570 Cytochrome c-type biogenesis protein NrfE E3384_20925 IPR003567 Cytochrome c-type biogenesis protein E3384_20925 IPR003568 Cytochrome c-type biogenesis protein CcmF E3384_20930 IPR005614 NrfD family E3384_20930 IPR017566 NrfD E3384_20935 IPR017567 Cytochrome c nitrite reductase, Fe-S protein E3384_20935 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_20935 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal E3384_20935 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_20935 IPR006311 Twin-arginine translocation pathway, signal sequence E3384_20940 IPR010177 Doubled CXXCH motif E3384_20940 IPR036280 Multiheme cytochrome superfamily E3384_20940 IPR011031 Multihaem cytochrome E3384_20940 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit E3384_20940 IPR023155 Cytochrome c-552/4 E3384_20945 IPR036280 Multiheme cytochrome superfamily E3384_20945 IPR011031 Multihaem cytochrome E3384_20945 IPR003321 Cytochrome c552 E3384_20945 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit E3384_20950 IPR042099 AMP-dependent synthetase-like superfamily E3384_20950 IPR000873 AMP-dependent synthetase/ligase E3384_20950 IPR020845 AMP-binding, conserved site E3384_20950 IPR025110 AMP-binding enzyme, C-terminal domain E3384_20950 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain E3384_20950 IPR011904 Acetate-CoA ligase E3384_20955 IPR007436 Protein of unknown function DUF485 E3384_20960 IPR001734 Sodium/solute symporter E3384_20960 IPR018212 Sodium/solute symporter, conserved site E3384_20960 IPR038377 Sodium/glucose symporter superfamily E3384_20960 IPR014083 Cation/acetate symporter ActP E3384_20965 IPR007300 CidB/LrgB family E3384_20965 IPR005261 Conserved hypothetical protein CHP00659 E3384_20970 IPR023760 Holin-like protein CidA E3384_20970 IPR005538 LrgA/CidA family E3384_20975 IPR000847 Transcription regulator HTH, LysR E3384_20975 IPR005119 LysR, substrate-binding E3384_20975 IPR036390 Winged helix DNA-binding domain superfamily E3384_20975 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_20980 IPR006153 Cation/H+ exchanger E3384_20980 IPR018422 Cation/H+ exchanger, CPA1 family E3384_20980 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria E3384_20980 IPR038770 Sodium/solute symporter superfamily E3384_20985 IPR006043 Xanthine/uracil/vitamin C permease E3384_20995 IPR009061 Putative DNA-binding domain superfamily E3384_20995 IPR000551 MerR-type HTH domain E3384_20995 IPR010211 Redox-sensitive transcriptional activator SoxR E3384_20995 IPR015358 Transcription regulator MerR, DNA binding E3384_21000 IPR020449 Transcription regulator HTH, AraC- type E3384_21000 IPR018062 HTH domain AraC-type, conserved site E3384_21000 IPR018060 DNA binding HTH domain, AraC-type E3384_21000 IPR009057 Homeobox-like domain superfamily E3384_21005 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain E3384_21005 IPR001633 EAL domain E3384_21005 IPR035919 EAL domain superfamily E3384_21010 IPR016958 Uncharacterised conserved protein UCP030798 E3384_21015 IPR003593 AAA+ ATPase domain E3384_21015 IPR036640 ABC transporter type 1, transmembrane domain superfamily E3384_21015 IPR017871 ABC transporter, conserved site E3384_21015 IPR011917 ABC transporter, lipid A export, MsbA E3384_21015 IPR003439 ABC transporter-like E3384_21015 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_21015 IPR011527 ABC transporter type 1, transmembrane domain E3384_21045 IPR000424 Primosome PriB/single-strand DNA-binding E3384_21045 IPR012340 Nucleic acid-binding, OB-fold E3384_21045 IPR011344 Single-stranded DNA-binding protein E3384_21050 IPR041552 UvrA DNA-binding domain E3384_21050 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_21050 IPR004602 UvrABC system subunit A E3384_21050 IPR017871 ABC transporter, conserved site E3384_21050 IPR041102 UvrA, interaction domain E3384_21050 IPR003439 ABC transporter-like E3384_21065 IPR038056 YjbR-like superfamily E3384_21065 IPR007351 Uncharacterised protein YjbR E3384_21070 IPR035917 YjbQ-like superfamily E3384_21070 IPR001602 Uncharacterised protein family UPF0047 E3384_21075 IPR005519 Acid phosphatase, class B-like E3384_21075 IPR036412 HAD-like superfamily E3384_21075 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA E3384_21075 IPR023214 HAD superfamily E3384_21080 IPR015424 Pyridoxal phosphate-dependent transferase E3384_21080 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site E3384_21080 IPR000796 Aspartate/other aminotransferase E3384_21080 IPR004839 Aminotransferase, class I/classII E3384_21080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_21080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_21085 IPR029066 PLP-binding barrel E3384_21085 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site E3384_21085 IPR001608 Alanine racemase, N-terminal E3384_21085 IPR011079 Alanine racemase, C-terminal E3384_21085 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal E3384_21085 IPR000821 Alanine racemase E3384_21090 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal E3384_21090 IPR007692 DNA helicase, DnaB type E3384_21090 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily E3384_21090 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_21090 IPR007693 DNA helicase, DnaB-like, N-terminal E3384_21090 IPR007694 DNA helicase, DnaB-like, C-terminal E3384_21090 IPR003593 AAA+ ATPase domain E3384_21095 IPR020843 Polyketide synthase, enoylreductase domain E3384_21095 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site E3384_21095 IPR013154 Alcohol dehydrogenase, N-terminal E3384_21095 IPR036291 NAD(P)-binding domain superfamily E3384_21095 IPR011032 GroES-like superfamily E3384_21095 IPR013149 Alcohol dehydrogenase, C-terminal E3384_21100 IPR014318 Phage shock protein, PspG E3384_21105 IPR018517 tRNA-dihydrouridine synthase, conserved site E3384_21105 IPR001269 tRNA-dihydrouridine synthase E3384_21105 IPR004653 tRNA-dihydrouridine(20/20a) synthase E3384_21105 IPR035587 DUS-like, FMN-binding domain E3384_21105 IPR013785 Aldolase-type TIM barrel E3384_21115 IPR036390 Winged helix DNA-binding domain superfamily E3384_21115 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_21115 IPR002481 Ferric-uptake regulator E3384_21120 IPR036629 YjbJ superfamily E3384_21120 IPR026042 Stress response protein YjbJ E3384_21120 IPR008462 CsbD-like domain E3384_21130 IPR002528 Multi antimicrobial extrusion protein E3384_21135 IPR036390 Winged helix DNA-binding domain superfamily E3384_21135 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_21135 IPR015927 Peptidase S24/S26A/S26B/S26C E3384_21135 IPR006200 Transcription regulator LexA E3384_21135 IPR006197 Peptidase S24, LexA-like E3384_21135 IPR006199 LexA repressor, DNA-binding domain E3384_21135 IPR036286 LexA/Signal peptidase-like superfamily E3384_21135 IPR039418 LexA-like E3384_21140 IPR000829 DAGK family E3384_21140 IPR033718 Diacylglycerol kinase, prokaryotic E3384_21140 IPR036945 Diacylglycerol kinase (DAGK) superfamily E3384_21145 IPR002123 Phospholipid/glycerol acyltransferase E3384_21145 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase E3384_21145 IPR041728 GPAT/DHAPAT, acyltransferase domain E3384_21145 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB E3384_21150 IPR006370 4-hydroxybenzoate polyprenyltransferase-like E3384_21150 IPR039653 Prenyltransferase E3384_21150 IPR000537 UbiA prenyltransferase family E3384_21150 IPR030470 UbiA prenyltransferase conserved site E3384_21155 IPR007440 Chorismate--pyruvate lyase E3384_21155 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily E3384_21160 IPR010794 Maltose operon periplasmic E3384_21165 IPR036998 Porin, LamB-type superfamily E3384_21165 IPR023738 Maltoporin E3384_21165 IPR003192 Porin, LamB-type E3384_21170 IPR017871 ABC transporter, conserved site E3384_21170 IPR008995 Molybdate/tungstate binding, C-terminal E3384_21170 IPR040582 MalK, OB fold domain E3384_21170 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_21170 IPR015855 ABC transporter, maltose/maltodextrin import, MalK E3384_21170 IPR003439 ABC transporter-like E3384_21170 IPR003593 AAA+ ATPase domain E3384_21180 IPR006061 Solute-binding family 1, conserved site E3384_21180 IPR006059 Bacterial extracellular solute-binding protein E3384_21180 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein E3384_21185 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like E3384_21185 IPR035277 MalF, N-terminal E3384_21185 IPR029345 Maltose transport system permease protein MalF, P2 domain E3384_21185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_21185 IPR035906 MetI-like superfamily E3384_21190 IPR035906 MetI-like superfamily E3384_21190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_21195 IPR009315 Phosphate-starvation-induced PsiE E3384_21195 IPR020948 Phosphate-starvation-induced PsiE-like E3384_21200 IPR010344 Exopolysaccharide biosynthesis protein YbjH E3384_21205 IPR010425 Domain of unknown function DUF1017 E3384_21210 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB E3384_21210 IPR023373 YmcC-like superfamily E3384_21220 IPR001672 Phosphoglucose isomerase (PGI) E3384_21220 IPR023096 Phosphoglucose isomerase, C-terminal E3384_21220 IPR035476 Phosphoglucose isomerase, SIS domain 1 E3384_21220 IPR035482 Phosphoglucose isomerase, SIS domain 2 E3384_21220 IPR018189 Phosphoglucose isomerase, conserved site E3384_21225 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain E3384_21225 IPR001048 Aspartate/glutamate/uridylate kinase E3384_21225 IPR018042 Aspartate kinase, conserved site E3384_21225 IPR036393 Acetylglutamate kinase-like superfamily E3384_21225 IPR005260 Aspartate kinase, monofunctional class E3384_21225 IPR002912 ACT domain E3384_21225 IPR001341 Aspartate kinase E3384_21230 IPR009057 Homeobox-like domain superfamily E3384_21230 IPR014875 Mor transcription activator E3384_21255 IPR036412 HAD-like superfamily E3384_21255 IPR023214 HAD superfamily E3384_21255 IPR006379 HAD-superfamily hydrolase, subfamily IIB E3384_21255 IPR000150 Cof family E3384_21260 IPR011991 ArsR-like helix-turn-helix domain E3384_21260 IPR014036 DeoR C-terminal sensor domain E3384_21260 IPR001034 DeoR-type HTH domain E3384_21260 IPR037171 NagB/RpiA transferase-like E3384_21260 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_21260 IPR036390 Winged helix DNA-binding domain superfamily E3384_21260 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_21265 IPR020317 Uncharacterised protein family YjbD E3384_21270 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain E3384_21270 IPR036986 RNA-binding S4 domain superfamily E3384_21270 IPR002942 RNA-binding S4 domain E3384_21270 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site E3384_21270 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F E3384_21270 IPR006145 Pseudouridine synthase, RsuA/RluA E3384_21270 IPR020103 Pseudouridine synthase, catalytic domain superfamily E3384_21275 IPR018636 Protein of unknown function DUF2058 E3384_21285 IPR029062 Class I glutamine amidotransferase-like E3384_21285 IPR005320 Peptidase S51 E3384_21285 IPR023172 Peptidase S51, dipeptidase E E3384_21290 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein E3384_21290 IPR003841 Sodium-dependent phosphate transport protein E3384_21295 IPR036594 Methionine synthase domain E3384_21295 IPR000489 Pterin-binding domain E3384_21295 IPR004223 Vitamin B12-dependent methionine synthase, activation domain E3384_21295 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily E3384_21295 IPR036589 Homocysteine-binding domain superfamily E3384_21295 IPR011822 Cobalamin-dependent methionine synthase E3384_21295 IPR003726 Homocysteine-binding domain E3384_21295 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain E3384_21295 IPR006158 Cobalamin (vitamin B12)-binding domain E3384_21295 IPR036724 Cobalamin-binding domain superfamily E3384_21295 IPR033706 Methionine synthase, B12-binding domain E3384_21295 IPR011005 Dihydropteroate synthase-like E3384_21300 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_21300 IPR029016 GAF-like domain superfamily E3384_21300 IPR014757 Transcription regulator IclR, C-terminal E3384_21300 IPR036390 Winged helix DNA-binding domain superfamily E3384_21300 IPR005471 Transcription regulator IclR, N-terminal E3384_21310 IPR010452 Isocitrate dehydrogenase kinasephosphatase E3384_21315 IPR039556 ICL/PEPM domain E3384_21315 IPR006254 Isocitrate lyase E3384_21315 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site E3384_21315 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_21315 IPR040442 Pyruvate kinase-like domain superfamily E3384_21320 IPR001465 Malate synthase E3384_21320 IPR006252 Malate synthase A E3384_21320 IPR011076 Malate synthase-like superfamily E3384_21320 IPR019830 Malate synthase, conserved site E3384_21325 IPR005697 Homoserine O-succinyltransferase MetA E3384_21325 IPR029062 Class I glutamine amidotransferase-like E3384_21325 IPR033752 MetA family E3384_21330 IPR016181 Acyl-CoA N-acyltransferase E3384_21330 IPR000182 GNAT domain E3384_21355 IPR011607 Methylglyoxal synthase-like domain E3384_21355 IPR016193 Cytidine deaminase-like E3384_21355 IPR024051 AICAR transformylase, duplicated domain superfamily E3384_21355 IPR002695 Bifunctional purine biosynthesis protein PurH-like E3384_21355 IPR036914 Methylglyoxal synthase-like domain superfamily E3384_21360 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal E3384_21360 IPR011054 Rudiment single hybrid motif E3384_21360 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily E3384_21360 IPR020560 Phosphoribosylglycinamide synthetase, C-domain E3384_21360 IPR000115 Phosphoribosylglycinamide synthetase E3384_21360 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E3384_21360 IPR011761 ATP-grasp fold E3384_21360 IPR013815 ATP-grasp fold, subdomain 1 E3384_21360 IPR016185 Pre-ATP-grasp domain superfamily E3384_21360 IPR020559 Phosphoribosylglycinamide synthetase, conserved site E3384_21365 IPR011006 CheY-like superfamily E3384_21365 IPR009057 Homeobox-like domain superfamily E3384_21365 IPR001789 Signal transduction response regulator, receiver domain E3384_21365 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_21365 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E3384_21365 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_21365 IPR025944 Sigma-54 interaction domain, conserved site E3384_21365 IPR002197 DNA binding HTH domain, Fis-type E3384_21365 IPR003593 AAA+ ATPase domain E3384_21365 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_21370 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_21370 IPR005467 Histidine kinase domain E3384_21370 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_21370 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_21370 IPR029151 Periplasmic sensor-like domain superfamily E3384_21370 IPR003594 Histidine kinase/HSP90-like ATPase E3384_21370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_21375 IPR025961 Heavy-metal resistance protein E3384_21380 IPR016500 Uncharacterised conserved protein UCP006993 E3384_21380 IPR010858 Protein of unknown function DUF1481 E3384_21385 IPR000119 Histone-like DNA-binding protein E3384_21385 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily E3384_21385 IPR020816 Histone-like DNA-binding protein, conserved site E3384_21390 IPR007338 Protein of unknown function DUF416 E3384_21390 IPR023381 YP001051499.1-like domain superfamily E3384_21395 IPR007581 Endonuclease V E3384_21400 IPR038071 UROD/MetE-like superfamily E3384_21400 IPR006361 Uroporphyrinogen decarboxylase HemE E3384_21400 IPR000257 Uroporphyrinogen decarboxylase (URO-D) E3384_21405 IPR015797 NUDIX hydrolase-like domain superfamily E3384_21405 IPR015376 Zinc ribbon, NADH pyrophosphatase E3384_21405 IPR000086 NUDIX hydrolase domain E3384_21405 IPR020084 NUDIX hydrolase, conserved site E3384_21405 IPR022925 NADH pyrophosphatase NudC E3384_21410 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd E3384_21410 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ E3384_21410 IPR038309 Rsd/AlgQ superfamily E3384_21415 IPR037509 Phosphomethylpyrimidine synthase E3384_21415 IPR025747 ThiC-associated domain E3384_21415 IPR038521 ThiC/Bza superfamily E3384_21415 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B E3384_21420 IPR034291 Thiamine phosphate synthase E3384_21420 IPR013785 Aldolase-type TIM barrel E3384_21420 IPR022998 Thiamine phosphate synthase/TenI E3384_21420 IPR036206 Thiamin phosphate synthase superfamily E3384_21425 IPR035985 Ubiquitin-activating enzyme E3384_21425 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF E3384_21425 IPR000594 THIF-type NAD/FAD binding fold E3384_21430 IPR012675 Beta-grasp domain superfamily E3384_21430 IPR010035 ThiS, thiamine-biosynthesis E3384_21430 IPR003749 Sulfur carrier ThiS/MoaD-like E3384_21430 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp E3384_21435 IPR008867 Thiazole synthase E3384_21435 IPR033983 Thiazole synthase ThiG E3384_21435 IPR013785 Aldolase-type TIM barrel E3384_21440 IPR010722 Biotin and thiamin synthesis-associated domain E3384_21440 IPR007197 Radical SAM E3384_21440 IPR012726 Thiazole biosynthesis ThiH E3384_21440 IPR034428 ThiH/NocL/HydG-like E3384_21440 IPR013785 Aldolase-type TIM barrel E3384_21465 IPR038120 RNA polymerase Rpb1, funnel domain superfamily E3384_21465 IPR007081 RNA polymerase Rpb1, domain 5 E3384_21465 IPR007083 RNA polymerase Rpb1, domain 4 E3384_21465 IPR042102 RNA polymerase Rpb1, domain 3 superfamily E3384_21465 IPR007066 RNA polymerase Rpb1, domain 3 E3384_21465 IPR007080 RNA polymerase Rpb1, domain 1 E3384_21465 IPR012754 DNA-directed RNA polymerase, subunit beta-prime E3384_21465 IPR006592 RNA polymerase, N-terminal E3384_21465 IPR000722 RNA polymerase, alpha subunit E3384_21470 IPR015712 DNA-directed RNA polymerase, subunit 2 E3384_21470 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily E3384_21470 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type E3384_21470 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain E3384_21470 IPR007121 RNA polymerase, beta subunit, conserved site E3384_21470 IPR007644 RNA polymerase, beta subunit, protrusion E3384_21470 IPR007642 RNA polymerase Rpb2, domain 2 E3384_21470 IPR037034 RNA polymerase Rpb2, domain 2 superfamily E3384_21470 IPR007645 RNA polymerase Rpb2, domain 3 E3384_21470 IPR007641 RNA polymerase Rpb2, domain 7 E3384_21470 IPR014724 RNA polymerase Rpb2, OB-fold E3384_21470 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain E3384_21475 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily E3384_21475 IPR008932 Ribosomal protein L7/L12, oligomerisation E3384_21475 IPR013823 Ribosomal protein L7/L12, C-terminal E3384_21475 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like E3384_21475 IPR000206 Ribosomal protein L7/L12 E3384_21480 IPR022973 Ribosomal protein L10 E3384_21480 IPR002363 Ribosomal protein L10, eubacterial, conserved site E3384_21480 IPR001790 Ribosomal protein L10P E3384_21485 IPR005878 Ribosomal protein L1, bacterial-type E3384_21485 IPR023673 Ribosomal protein L1, conserved site E3384_21485 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich E3384_21485 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein E3384_21485 IPR023674 Ribosomal protein L1-like E3384_21485 IPR002143 Ribosomal protein L1 E3384_21490 IPR000911 Ribosomal protein L11/L12 E3384_21490 IPR020784 Ribosomal protein L11, N-terminal E3384_21490 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily E3384_21490 IPR006519 Ribosomal protein L11, bacterial-type E3384_21490 IPR020783 Ribosomal protein L11, C-terminal E3384_21490 IPR036769 Ribosomal protein L11, C-terminal domain superfamily E3384_21490 IPR020785 Ribosomal protein L11, conserved site E3384_21495 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site E3384_21495 IPR036735 NusG, N-terminal domain superfamily E3384_21495 IPR006645 NusG, N-terminal E3384_21495 IPR005824 KOW E3384_21495 IPR001062 Transcription antitermination protein, NusG E3384_21495 IPR014722 Ribosomal protein L2, domain 2 E3384_21495 IPR008991 Translation protein SH3-like domain superfamily E3384_21500 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit E3384_21500 IPR038379 SecE superfamily E3384_21500 IPR005807 SecE subunit of protein translocation complex, bacterial-like E3384_21505 IPR031157 Tr-type G domain, conserved site E3384_21505 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal E3384_21505 IPR033720 Elongation factor Tu, domain 2 E3384_21505 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_21505 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain E3384_21505 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle E3384_21505 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal E3384_21505 IPR009000 Translation protein, beta-barrel domain superfamily E3384_21505 IPR004161 Translation elongation factor EFTu-like, domain 2 E3384_21505 IPR005225 Small GTP-binding protein domain E3384_21505 IPR000795 Transcription factor, GTP-binding domain E3384_21535 IPR004566 Pantothenate kinase E3384_21535 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_21535 IPR006083 Phosphoribulokinase/uridine kinase E3384_21540 IPR013196 Helix-turn-helix, type 11 E3384_21540 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain E3384_21540 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_21540 IPR036390 Winged helix DNA-binding domain superfamily E3384_21540 IPR008988 Transcriptional repressor, C-terminal E3384_21540 IPR004408 Biotin--acetyl-CoA-carboxylase ligase E3384_21540 IPR030855 Bifunctional ligase/repressor BirA E3384_21540 IPR003142 Biotin protein ligase, C-terminal E3384_21540 IPR004409 Biotin operon repressor, helix-turn-helix domain E3384_21545 IPR016166 FAD-binding domain, PCMH-type E3384_21545 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal E3384_21545 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily E3384_21545 IPR006094 FAD linked oxidase, N-terminal E3384_21545 IPR016169 FAD-binding, type PCMH, subdomain 2 E3384_21545 IPR036318 FAD-binding, type PCMH-like superfamily E3384_21545 IPR016167 FAD-binding, type PCMH, subdomain 1 E3384_21545 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase E3384_21575 IPR004391 Glutamate racemase E3384_21575 IPR033134 Asp/Glu racemase, active site 2 E3384_21575 IPR018187 Asp/Glu racemase, active site 1 E3384_21575 IPR001920 Asp/Glu racemase E3384_21575 IPR015942 Asp/Glu/hydantoin racemase E3384_21580 IPR000531 TonB-dependent receptor-like, beta-barrel E3384_21580 IPR012910 TonB-dependent receptor, plug domain E3384_21580 IPR039426 Vitamin B12 transporter BtuB-like E3384_21580 IPR010101 TonB-dependent vitamin B12 transporter BtuB E3384_21580 IPR010916 TonB box, conserved site E3384_21580 IPR037066 TonB-dependent receptor, plug domain superfamily E3384_21580 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily E3384_21580 IPR010917 TonB-dependent receptor, conserved site E3384_21585 IPR030391 RNA methyltransferase TrmA, conserved site E3384_21585 IPR030390 RNA methyltransferase TrmA, active site E3384_21585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_21585 IPR010280 (Uracil-5)-methyltransferase family E3384_21585 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA E3384_21590 IPR009867 Protein of unknown function DUF1422 E3384_21595 IPR009057 Homeobox-like domain superfamily E3384_21595 IPR001647 DNA-binding HTH domain, TetR-type E3384_21595 IPR023764 Transcriptional repressor HTH, FabR E3384_21600 IPR022962 Soluble pyridine nucleotide transhydrogenase E3384_21600 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I E3384_21600 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3384_21600 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily E3384_21600 IPR023753 FAD/NAD(P)-binding domain E3384_21600 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_21605 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_21605 IPR000847 Transcription regulator HTH, LysR E3384_21605 IPR005119 LysR, substrate-binding E3384_21605 IPR036390 Winged helix DNA-binding domain superfamily E3384_21615 IPR022761 Fumarate lyase, N-terminal E3384_21615 IPR009049 Argininosuccinate lyase E3384_21615 IPR024083 Fumarase/histidase, N-terminal E3384_21615 IPR020557 Fumarate lyase, conserved site E3384_21615 IPR000362 Fumarate lyase family E3384_21615 IPR008948 L-Aspartase-like E3384_21615 IPR029419 Argininosuccinate lyase, C-terminal E3384_21620 IPR037528 Acetylglutamate kinase ArgB E3384_21620 IPR001048 Aspartate/glutamate/uridylate kinase E3384_21620 IPR036393 Acetylglutamate kinase-like superfamily E3384_21620 IPR004662 Acetylglutamate kinase family E3384_21620 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic E3384_21625 IPR036291 NAD(P)-binding domain superfamily E3384_21625 IPR000534 Semialdehyde dehydrogenase, NAD-binding E3384_21625 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site E3384_21625 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 E3384_21625 IPR012280 Semialdehyde dehydrogenase, dimerisation domain E3384_21630 IPR011650 Peptidase M20, dimerisation domain E3384_21630 IPR010169 Acetylornithine deacetylase ArgE E3384_21630 IPR036264 Bacterial exopeptidase dimerisation domain E3384_21630 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site E3384_21630 IPR002933 Peptidase M20 E3384_21635 IPR021135 Phosphoenolpyruvate carboxylase E3384_21635 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type E3384_21635 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site E3384_21635 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_21635 IPR033129 Phosphoenolpyruvate carboxylase, His active site E3384_21640 IPR017850 Alkaline-phosphatase-like, core domain superfamily E3384_21640 IPR040423 Phosphoethanolamine transferase E3384_21640 IPR000917 Sulfatase, N-terminal E3384_21645 IPR020449 Transcription regulator HTH, AraC- type E3384_21645 IPR018062 HTH domain AraC-type, conserved site E3384_21645 IPR018060 DNA binding HTH domain, AraC-type E3384_21645 IPR009057 Homeobox-like domain superfamily E3384_21650 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_21650 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_21650 IPR036095 PTS system IIB component-like superfamily E3384_21650 IPR003353 Phosphotransferase system, fructose-specific IIB subunit E3384_21655 IPR013785 Aldolase-type TIM barrel E3384_21655 IPR001989 Radical-activating enzyme, conserved site E3384_21655 IPR007197 Radical SAM E3384_21655 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_21655 IPR034457 Organic radical-activating enzymes E3384_21655 IPR040074 BssD/PflA/YjjW E3384_21655 IPR012839 Organic radical enzyme activase E3384_21665 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_21665 IPR036095 PTS system IIB component-like superfamily E3384_21665 IPR003353 Phosphotransferase system, fructose-specific IIB subunit E3384_21665 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_21670 IPR013014 Phosphotransferase system, EIIC component, type 2 E3384_21670 IPR006327 Phosphotransferase system, fructose IIC component E3384_21675 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site E3384_21675 IPR018274 PEP-utilising enzyme, active site E3384_21675 IPR006318 Phosphotransferase system, enzyme I-like E3384_21675 IPR008279 PEP-utilising enzyme, mobile domain E3384_21675 IPR036618 PtsI, HPr-binding domain superfamily E3384_21675 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily E3384_21675 IPR023151 PEP-utilising enzyme, conserved site E3384_21675 IPR036637 Phosphohistidine domain superfamily E3384_21675 IPR016152 Phosphotransferase/anion transporter E3384_21675 IPR035895 HPr-like superfamily E3384_21675 IPR008731 Phosphotransferase system, enzyme I N-terminal E3384_21675 IPR000121 PEP-utilising enzyme, C-terminal E3384_21675 IPR002178 PTS EIIA type-2 domain E3384_21675 IPR040442 Pyruvate kinase-like domain superfamily E3384_21675 IPR000032 Phosphocarrier protein HPr-like E3384_21680 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase E3384_21680 IPR013785 Aldolase-type TIM barrel E3384_21680 IPR018225 Transaldolase, active site E3384_21680 IPR001585 Transaldolase/Fructose-6-phosphate aldolase E3384_21680 IPR023001 Fructose-6-phosphate aldolase E3384_21680 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial E3384_21685 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA E3384_21685 IPR018211 Alcohol dehydrogenase, iron-type, conserved site E3384_21685 IPR016205 Glycerol dehydrogenase E3384_21690 IPR009706 Protein of unknown function DUF1287 E3384_21695 IPR019793 Peroxidases heam-ligand binding site E3384_21695 IPR010255 Haem peroxidase superfamily E3384_21695 IPR002016 Haem peroxidase E3384_21695 IPR000763 Catalase-peroxidase haem E3384_21695 IPR019794 Peroxidase, active site E3384_21700 IPR029041 FAD-linked oxidoreductase-like E3384_21700 IPR004620 5,10-methylenetetrahydrofolate reductase E3384_21700 IPR003171 Methylenetetrahydrofolate reductase E3384_21705 IPR029052 Metallo-dependent phosphatase-like E3384_21705 IPR008334 5'-Nucleotidase, C-terminal E3384_21705 IPR041498 Bacterial Ig domain E3384_21705 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type E3384_21705 IPR006146 5'-Nucleotidase, conserved site E3384_21705 IPR036907 5'-Nucleotidase, C-terminal domain superfamily E3384_21705 IPR006179 5'-Nucleotidase/apyrase E3384_21720 IPR010920 LSM domain superfamily E3384_21720 IPR008910 Conserved TM helix E3384_21720 IPR006686 Mechanosensitive ion channel MscS, conserved site E3384_21720 IPR023408 Mechanosensitive ion channel MscS domain superfamily E3384_21720 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 E3384_21720 IPR011066 Mechanosensitive ion channel MscS, C-terminal E3384_21720 IPR006685 Mechanosensitive ion channel MscS E3384_21725 IPR001048 Aspartate/glutamate/uridylate kinase E3384_21725 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain E3384_21725 IPR036393 Acetylglutamate kinase-like superfamily E3384_21725 IPR001341 Aspartate kinase E3384_21725 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding E3384_21725 IPR018042 Aspartate kinase, conserved site E3384_21725 IPR036291 NAD(P)-binding domain superfamily E3384_21725 IPR019811 Homoserine dehydrogenase, conserved site E3384_21725 IPR001342 Homoserine dehydrogenase, catalytic E3384_21725 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I E3384_21730 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme E3384_21730 IPR015424 Pyridoxal phosphate-dependent transferase E3384_21730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_21730 IPR011821 O-succinylhomoserine (thiol)-lyase E3384_21730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_21735 IPR010985 Ribbon-helix-helix E3384_21735 IPR023453 Methionine repressor MetJ domain superfamily E3384_21735 IPR002084 Methionine repressor MetJ E3384_21740 IPR035391 Arylsulfotransferase, Ig-like domain E3384_21740 IPR010262 Arylsulfotransferase, bacteria E3384_21740 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria E3384_21740 IPR038477 Arylsulfotransferase, N-terminal domain superfamily E3384_21750 IPR034704 L28p-like E3384_21750 IPR002150 Ribosomal protein L31 E3384_21750 IPR042105 Ribosomal protein L31 superfamily E3384_21750 IPR027491 Ribosomal protein L31 type A E3384_21755 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_21755 IPR011545 DEAD/DEAH box helicase domain E3384_21755 IPR001650 Helicase, C-terminal E3384_21755 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain E3384_21755 IPR005259 Primosomal protein N' E3384_21755 IPR041222 Primosomal protein N', 3' DNA-binding domain E3384_21755 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily E3384_21755 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_21755 IPR041236 Primosomal protein N, C-terminal domain E3384_21760 IPR028082 Periplasmic binding protein-like I E3384_21760 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_21760 IPR000843 LacI-type HTH domain E3384_21765 IPR007730 Sporulation-like domain E3384_21765 IPR011930 Cell division protein FtsN E3384_21765 IPR036680 Sporulation-like domain superfamily E3384_21770 IPR022281 ATP-dependent protease, HslV subunit E3384_21770 IPR029055 Nucleophile aminohydrolases, N-terminal E3384_21770 IPR001353 Proteasome, subunit alpha/beta E3384_21770 IPR023333 Proteasome B-type subunit E3384_21775 IPR003593 AAA+ ATPase domain E3384_21775 IPR004491 Heat shock protein HslU E3384_21775 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_21775 IPR019489 Clp ATPase, C-terminal E3384_21775 IPR003959 ATPase, AAA-type, core E3384_21780 IPR026046 UbiA prenyltransferase domain containing protein 1 E3384_21780 IPR000537 UbiA prenyltransferase family E3384_21780 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase E3384_21785 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein E3384_21785 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily E3384_21785 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria E3384_21785 IPR010203 Regulator of ribonuclease activity A E3384_21790 IPR009252 Cell division protein ZapB E3384_21795 IPR023271 Aquaporin-like E3384_21795 IPR000425 Major intrinsic protein E3384_21795 IPR022357 Major intrinsic protein, conserved site E3384_21800 IPR000577 Carbohydrate kinase, FGGY E3384_21800 IPR018485 Carbohydrate kinase, FGGY, C-terminal E3384_21800 IPR018483 Carbohydrate kinase, FGGY, conserved site E3384_21800 IPR018484 Carbohydrate kinase, FGGY, N-terminal E3384_21800 IPR005999 Glycerol kinase E3384_21805 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase E3384_21810 IPR017938 Riboflavin synthase-like beta-barrel E3384_21810 IPR001433 Oxidoreductase FAD/NAD(P)-binding E3384_21810 IPR017927 FAD-binding domain, ferredoxin reductase-type E3384_21810 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain E3384_21810 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain E3384_21810 IPR033892 Ferredoxin--NADP reductase, bacteria E3384_21815 IPR008523 Protein of unknown function DUF805 E3384_21820 IPR009918 Protein of unknown function DUF1454 E3384_21825 IPR020861 Triosephosphate isomerase, active site E3384_21825 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic E3384_21825 IPR035990 Triosephosphate isomerase superfamily E3384_21825 IPR013785 Aldolase-type TIM barrel E3384_21825 IPR000652 Triosephosphate isomerase E3384_21830 IPR013785 Aldolase-type TIM barrel E3384_21830 IPR000056 Ribulose-phosphate 3-epimerase-like E3384_21830 IPR011060 Ribulose-phosphate binding barrel E3384_21835 IPR007138 Antibiotic biosynthesis monooxygenase domain E3384_21835 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase E3384_21835 IPR011008 Dimeric alpha-beta barrel E3384_21840 IPR002915 DeoC/FbaB/ lacD aldolase E3384_21840 IPR013785 Aldolase-type TIM barrel E3384_21840 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase E3384_21840 IPR041720 Aldolase FbaB-like, archaeal-type E3384_21845 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB E3384_21845 IPR025997 Periplasmic binding protein E3384_21845 IPR028082 Periplasmic binding protein-like I E3384_21850 IPR001851 ABC transporter, permease E3384_21855 IPR001851 ABC transporter, permease E3384_21860 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_21860 IPR030281 Autoinducer 2 import ATP-binding protein LsrA E3384_21860 IPR017871 ABC transporter, conserved site E3384_21860 IPR003439 ABC transporter-like E3384_21860 IPR003593 AAA+ ATPase domain E3384_21865 IPR007324 Sugar-binding domain, putative E3384_21865 IPR037171 NagB/RpiA transferase-like E3384_21865 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_21870 IPR018484 Carbohydrate kinase, FGGY, N-terminal E3384_21870 IPR033676 Autoinducer-2 kinase E3384_21870 IPR000577 Carbohydrate kinase, FGGY E3384_21870 IPR018485 Carbohydrate kinase, FGGY, C-terminal E3384_21880 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily E3384_21880 IPR036265 HIT-like superfamily E3384_21880 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial E3384_21880 IPR003763 CDP-diacylglycerol pyrophosphatase E3384_21890 IPR000524 Transcription regulator HTH, GntR E3384_21890 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_21890 IPR036390 Winged helix DNA-binding domain superfamily E3384_21890 IPR004839 Aminotransferase, class I/classII E3384_21890 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_21890 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_21890 IPR015424 Pyridoxal phosphate-dependent transferase E3384_21900 IPR011611 Carbohydrate kinase PfkB E3384_21900 IPR002139 Ribokinase/fructokinase E3384_21900 IPR029056 Ribokinase-like E3384_21900 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_21905 IPR039672 Lactose permease-like E3384_21905 IPR018043 Sodium:galactoside symporter, conserved site E3384_21905 IPR036259 MFS transporter superfamily E3384_21905 IPR001927 Sodium:galactoside symporter E3384_21910 IPR036265 HIT-like superfamily E3384_21910 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily E3384_21910 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial E3384_21910 IPR003763 CDP-diacylglycerol pyrophosphatase E3384_21915 IPR000957 Sulphate/thiosulphate-binding, conserved site E3384_21915 IPR034408 Sulphate/thiosulphate-binding site E3384_21915 IPR005669 Thiosulphate/Sulfate-binding protein E3384_21920 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type E3384_21920 IPR035966 Phosphofructokinase superfamily E3384_21920 IPR022953 ATP-dependent 6-phosphofructokinase E3384_21920 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic E3384_21920 IPR000023 Phosphofructokinase domain E3384_21920 IPR015912 Phosphofructokinase, conserved site E3384_21925 IPR027469 Cation efflux transmembrane domain superfamily E3384_21925 IPR023783 Cation efflux pump FieF E3384_21925 IPR036837 Cation efflux protein, cytoplasmic domain superfamily E3384_21925 IPR027470 Cation efflux protein, cytoplasmic domain E3384_21925 IPR002524 Cation efflux protein E3384_21930 IPR012899 LTXXQ motif family protein E3384_21935 IPR001789 Signal transduction response regulator, receiver domain E3384_21935 IPR039420 Transcriptional regulatory protein WalR-like E3384_21935 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_21935 IPR011006 CheY-like superfamily E3384_21935 IPR001867 OmpR/PhoB-type DNA-binding domain E3384_21940 IPR003594 Histidine kinase/HSP90-like ATPase E3384_21940 IPR003660 HAMP domain E3384_21940 IPR038515 CpxA, periplasmic domain superfamily E3384_21940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_21940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_21940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_21940 IPR032404 Two-component sensor protein CpxA, periplasmic domain E3384_21940 IPR005467 Histidine kinase domain E3384_21940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_21950 IPR011037 Pyruvate kinase-like, insert domain superfamily E3384_21950 IPR005163 3-alpha domain E3384_21950 IPR005302 Molybdenum cofactor sulfurase, C-terminal E3384_21955 IPR001189 Manganese/iron superoxide dismutase E3384_21955 IPR019833 Manganese/iron superoxide dismutase, binding site E3384_21955 IPR019832 Manganese/iron superoxide dismutase, C-terminal E3384_21955 IPR019831 Manganese/iron superoxide dismutase, N-terminal E3384_21955 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily E3384_21955 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily E3384_21960 IPR004682 TRAP transporter solute receptor, DctP family E3384_21960 IPR018389 TRAP transporter solute receptor DctP/TeaA E3384_21960 IPR038404 TRAP transporter solute receptor DctP superfamily E3384_21965 IPR007387 TRAP transporter, small membrane protein DctQ E3384_21970 IPR004681 TRAP transporter large membrane protein DctM E3384_21970 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit E3384_21975 IPR009331 Oligogalacturonate-specific porin E3384_21980 IPR004673 L-rhamnose-proton symport, RhaT E3384_21985 IPR018062 HTH domain AraC-type, conserved site E3384_21985 IPR011051 RmlC-like cupin domain superfamily E3384_21985 IPR020449 Transcription regulator HTH, AraC- type E3384_21985 IPR014710 RmlC-like jelly roll fold E3384_21985 IPR018060 DNA binding HTH domain, AraC-type E3384_21985 IPR009057 Homeobox-like domain superfamily E3384_21985 IPR003313 AraC-type arabinose-binding/dimerisation domain E3384_21985 IPR023699 Transcription activator HTH, RhaR E3384_21990 IPR023609 Transcription regulator HTH, RhaS E3384_21990 IPR020449 Transcription regulator HTH, AraC- type E3384_21990 IPR014710 RmlC-like jelly roll fold E3384_21990 IPR018062 HTH domain AraC-type, conserved site E3384_21990 IPR018060 DNA binding HTH domain, AraC-type E3384_21990 IPR009057 Homeobox-like domain superfamily E3384_21990 IPR003313 AraC-type arabinose-binding/dimerisation domain E3384_21990 IPR037923 Transcription regulator HTH-like E3384_21995 IPR013449 Rhamnulokinase E3384_21995 IPR018484 Carbohydrate kinase, FGGY, N-terminal E3384_21995 IPR018485 Carbohydrate kinase, FGGY, C-terminal E3384_22000 IPR009308 Rhamnose isomerase E3384_22000 IPR036237 Xylose isomerase-like superfamily E3384_22005 IPR013447 Rhamnulose-1-phosphate aldolase E3384_22005 IPR001303 Class II aldolase/adducin N-terminal E3384_22005 IPR036409 Class II aldolase/adducin N-terminal domain superfamily E3384_22010 IPR018211 Alcohol dehydrogenase, iron-type, conserved site E3384_22010 IPR039697 Iron-type alcohol dehydrogenase-like E3384_22010 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA E3384_22015 IPR011008 Dimeric alpha-beta barrel E3384_22015 IPR008000 Rhamnose/fucose mutarotase E3384_22015 IPR013448 L-rhamnose mutarotase E3384_22025 IPR011606 Branched-chain amino acid transport, permease E3384_22025 IPR004471 Branched-chain amino acid transport, AzlC E3384_22035 IPR024291 Protein of unknown function DUF3829 E3384_22040 IPR024291 Protein of unknown function DUF3829 E3384_22045 IPR003786 Sulfur carrier protein FdhD E3384_22045 IPR016193 Cytidine deaminase-like E3384_22055 IPR038384 Formate dehydrogenase, C-terminal domain superfamily E3384_22055 IPR014603 Formate dehydrogenase iron-sulphur subunit E3384_22055 IPR015246 Formate dehydrogenase, transmembrane E3384_22055 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain E3384_22055 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria E3384_22055 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site E3384_22060 IPR016174 Di-haem cytochrome, transmembrane E3384_22060 IPR006471 Formate dehydrogenase, gamma subunit E3384_22060 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase E3384_22065 IPR024064 FdhE-like superfamily E3384_22065 IPR006452 Formate dehydrogenase accessory protein E3384_22075 IPR009387 Toxin HigB-2 E3384_22080 IPR029058 Alpha/Beta hydrolase fold E3384_22080 IPR013094 Alpha/beta hydrolase fold-3 E3384_22085 IPR016181 Acyl-CoA N-acyltransferase E3384_22085 IPR012660 Thioesterase, putative E3384_22085 IPR029069 HotDog domain superfamily E3384_22085 IPR000182 GNAT domain E3384_22090 IPR003732 D-aminoacyl-tRNA deacylase DTD E3384_22090 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily E3384_22095 IPR017039 Virulence factor BrkB E3384_22095 IPR023679 Uncharacterised protein family UPF0761, bacterial E3384_22100 IPR006439 HAD hydrolase, subfamily IA E3384_22100 IPR041492 Haloacid dehalogenase-like hydrolase E3384_22100 IPR023198 Phosphoglycolate phosphatase-like, domain 2 E3384_22100 IPR023214 HAD superfamily E3384_22100 IPR036412 HAD-like superfamily E3384_22105 IPR001034 DeoR-type HTH domain E3384_22105 IPR011991 ArsR-like helix-turn-helix domain E3384_22105 IPR014036 DeoR C-terminal sensor domain E3384_22105 IPR037171 NagB/RpiA transferase-like E3384_22105 IPR018356 Transcription regulator, HTH DeoR-type, conserved site E3384_22105 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_22105 IPR036390 Winged helix DNA-binding domain superfamily E3384_22110 IPR030877 Sulfofructose kinase E3384_22110 IPR029056 Ribokinase-like E3384_22110 IPR002139 Ribokinase/fructokinase E3384_22110 IPR011611 Carbohydrate kinase PfkB E3384_22110 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_22115 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain E3384_22115 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_22115 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_22115 IPR015815 3-hydroxyisobutyrate dehydrogenase-related E3384_22115 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding E3384_22115 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site E3384_22115 IPR036291 NAD(P)-binding domain superfamily E3384_22115 IPR030876 3-sulfolactaldehyde reductase E3384_22120 IPR013785 Aldolase-type TIM barrel E3384_22120 IPR002915 DeoC/FbaB/ lacD aldolase E3384_22120 IPR017291 Sulfofructosephosphate aldolase, YihT E3384_22125 IPR008928 Six-hairpin glycosidase superfamily E3384_22125 IPR030875 Sulfoquinovose isomerase E3384_22125 IPR012341 Six-hairpin glycosidase-like superfamily E3384_22125 IPR034116 AGE domain E3384_22130 IPR037480 YihR-like E3384_22130 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase E3384_22130 IPR011013 Galactose mutarotase-like domain superfamily E3384_22130 IPR014718 Glycoside hydrolase-type carbohydrate-binding E3384_22135 IPR011013 Galactose mutarotase-like domain superfamily E3384_22135 IPR000322 Glycoside hydrolase family 31 E3384_22135 IPR013780 Glycosyl hydrolase, all-beta E3384_22135 IPR017853 Glycoside hydrolase superfamily E3384_22140 IPR039672 Lactose permease-like E3384_22140 IPR018043 Sodium:galactoside symporter, conserved site E3384_22140 IPR001927 Sodium:galactoside symporter E3384_22140 IPR036259 MFS transporter superfamily E3384_22145 IPR001927 Sodium:galactoside symporter E3384_22145 IPR036259 MFS transporter superfamily E3384_22145 IPR039672 Lactose permease-like E3384_22145 IPR018043 Sodium:galactoside symporter, conserved site E3384_22150 IPR009331 Oligogalacturonate-specific porin E3384_22170 IPR023404 Radical SAM, alpha/beta horseshoe E3384_22170 IPR006638 Elp3/MiaB/NifB E3384_22170 IPR004559 Heme chaperone HemW-like E3384_22170 IPR034505 Anaerobic coproporphyrinogen-III oxidase E3384_22170 IPR007197 Radical SAM E3384_22180 IPR036412 HAD-like superfamily E3384_22180 IPR006379 HAD-superfamily hydrolase, subfamily IIB E3384_22180 IPR023214 HAD superfamily E3384_22180 IPR000150 Cof family E3384_22190 IPR008146 Glutamine synthetase, catalytic domain E3384_22190 IPR004809 Glutamine synthetase type I E3384_22190 IPR027303 Glutamine synthetase, glycine-rich site E3384_22190 IPR001637 Glutamine synthetase class-I, adenylation site E3384_22190 IPR008147 Glutamine synthetase, beta-Grasp domain E3384_22190 IPR027302 Glutamine synthetase, N-terminal conserved site E3384_22190 IPR036651 Glutamine synthetase, N-terminal domain superfamily E3384_22190 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain E3384_22195 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain E3384_22195 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily E3384_22195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal E3384_22195 IPR013767 PAS fold E3384_22195 IPR005467 Histidine kinase domain E3384_22195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily E3384_22195 IPR003594 Histidine kinase/HSP90-like ATPase E3384_22195 IPR035965 PAS domain superfamily E3384_22195 IPR000014 PAS domain E3384_22200 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 E3384_22200 IPR011006 CheY-like superfamily E3384_22200 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_22200 IPR025944 Sigma-54 interaction domain, conserved site E3384_22200 IPR010114 DNA-binding transcriptional regulator NtrC E3384_22200 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22200 IPR002078 RNA polymerase sigma factor 54 interaction domain E3384_22200 IPR001789 Signal transduction response regulator, receiver domain E3384_22200 IPR002197 DNA binding HTH domain, Fis-type E3384_22200 IPR003593 AAA+ ATPase domain E3384_22200 IPR009057 Homeobox-like domain superfamily E3384_22210 IPR034505 Anaerobic coproporphyrinogen-III oxidase E3384_22210 IPR007197 Radical SAM E3384_22210 IPR010723 HemN, C-terminal E3384_22210 IPR006638 Elp3/MiaB/NifB E3384_22210 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN E3384_22210 IPR023404 Radical SAM, alpha/beta horseshoe E3384_22215 IPR007336 Der GTPase activator E3384_22225 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22225 IPR006073 GTP binding domain E3384_22225 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC E3384_22225 IPR030393 EngB-type guanine nucleotide-binding (G) domain E3384_22230 IPR008918 Helix-hairpin-helix motif, class 2 E3384_22230 IPR002298 DNA polymerase A E3384_22230 IPR002562 3'-5' exonuclease domain E3384_22230 IPR036279 5'-3' exonuclease, C-terminal domain superfamily E3384_22230 IPR019760 DNA-directed DNA polymerase, family A, conserved site E3384_22230 IPR001098 DNA-directed DNA polymerase, family A, palm domain E3384_22230 IPR020045 DNA polymerase I-like, H3TH domain E3384_22230 IPR018320 DNA polymerase 1 E3384_22230 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal E3384_22230 IPR002421 5'-3' exonuclease, N-terminal E3384_22230 IPR012337 Ribonuclease H-like superfamily E3384_22230 IPR036397 Ribonuclease H superfamily E3384_22230 IPR029060 PIN-like domain superfamily E3384_22235 IPR002123 Phospholipid/glycerol acyltransferase E3384_22240 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL E3384_22240 IPR036249 Thioredoxin-like superfamily E3384_22240 IPR001853 DSBA-like thioredoxin domain E3384_22240 IPR013766 Thioredoxin domain E3384_22240 IPR017937 Thioredoxin, conserved site E3384_22245 IPR011009 Protein kinase-like domain superfamily E3384_22245 IPR002575 Aminoglycoside phosphotransferase E3384_22245 IPR032882 SrkA/RdoA protein kinase E3384_22250 IPR009383 Protein of unknown function DUF1040 E3384_22250 IPR038134 YihD-like superfamily E3384_22255 IPR013482 Molybdenum cofactor guanylyltransferase E3384_22255 IPR025877 MobA-like NTP transferase E3384_22255 IPR029044 Nucleotide-diphospho-sugar transferases E3384_22260 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22260 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain E3384_22290 IPR008254 Flavodoxin/nitric oxide synthase E3384_22290 IPR029039 Flavoprotein-like superfamily E3384_22290 IPR026816 Flavodoxin domain E3384_22290 IPR001226 Flavodoxin, conserved site E3384_22295 IPR003445 Cation transporter E3384_22295 IPR004772 TrkH potassium transport family E3384_22300 IPR001498 Impact, N-terminal E3384_22300 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site E3384_22300 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal E3384_22300 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_22300 IPR036956 Impact, N-terminal domain superfamily E3384_22300 IPR035647 EF-G domain III/V-like E3384_22300 IPR023582 Impact family E3384_22300 IPR015796 Impact family, bacterial/archaeal E3384_22305 IPR022846 Xaa-Pro dipeptidase E3384_22305 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site E3384_22305 IPR000994 Peptidase M24 E3384_22305 IPR036005 Creatinase/aminopeptidase-like E3384_22305 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal E3384_22310 IPR029045 ClpP/crotonase-like domain superfamily E3384_22310 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site E3384_22310 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding E3384_22310 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal E3384_22310 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_22310 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site E3384_22310 IPR001753 Enoyl-CoA hydratase/isomerase E3384_22310 IPR012799 Fatty oxidation complex, alpha subunit FadB E3384_22310 IPR036291 NAD(P)-binding domain superfamily E3384_22315 IPR020613 Thiolase, conserved site E3384_22315 IPR012805 Acetyl-CoA C-acyltransferase FadA E3384_22315 IPR002155 Thiolase E3384_22315 IPR016039 Thiolase-like E3384_22315 IPR020615 Thiolase, acyl-enzyme intermediate active site E3384_22315 IPR020610 Thiolase, active site E3384_22315 IPR020617 Thiolase, C-terminal E3384_22315 IPR020616 Thiolase, N-terminal E3384_22320 IPR035391 Arylsulfotransferase, Ig-like domain E3384_22320 IPR010262 Arylsulfotransferase, bacteria E3384_22320 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria E3384_22320 IPR038477 Arylsulfotransferase, N-terminal domain superfamily E3384_22325 IPR017927 FAD-binding domain, ferredoxin reductase-type E3384_22325 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain E3384_22325 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain E3384_22325 IPR017938 Riboflavin synthase-like beta-barrel E3384_22325 IPR001433 Oxidoreductase FAD/NAD(P)-binding E3384_22330 IPR023677 UbiD decarboxylyase, bacteria E3384_22330 IPR002830 UbiD decarboxylyase family E3384_22335 IPR010215 Transcription antitermination protein RfaH E3384_22335 IPR006645 NusG, N-terminal E3384_22335 IPR036735 NusG, N-terminal domain superfamily E3384_22340 IPR001130 TatD family E3384_22340 IPR032466 Metal-dependent hydrolase E3384_22340 IPR024918 3'-5' ssDNA/RNA exonuclease TatD E3384_22340 IPR018228 Deoxyribonuclease, TatD-related, conserved site E3384_22345 IPR019820 Sec-independent periplasmic protein translocase, conserved site E3384_22345 IPR002033 Sec-independent periplasmic protein translocase TatC E3384_22350 IPR018448 Twin-arginine translocation protein TatB E3384_22355 IPR006312 Sec-independent protein translocase protein TatA/E E3384_22355 IPR003369 Sec-independent protein translocase protein TatA/B/E E3384_22360 IPR011009 Protein kinase-like domain superfamily E3384_22360 IPR004147 UbiB domain E3384_22360 IPR010232 Probable protein kinase UbiB E3384_22365 IPR036527 SCP2 sterol-binding domain superfamily E3384_22365 IPR003033 SCP2 sterol-binding domain E3384_22365 IPR038989 Ubiquinone biosynthesis protein UbiJ E3384_22370 IPR023576 UbiE/COQ5 methyltransferase, conserved site E3384_22370 IPR004033 UbiE/COQ5 methyltransferase E3384_22370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_22375 IPR003798 DNA recombination RmuC E3384_22380 IPR010058 Uridine phosphorylase E3384_22380 IPR035994 Nucleoside phosphorylase superfamily E3384_22380 IPR018016 Nucleoside phosphorylase, conserved site E3384_22380 IPR000845 Nucleoside phosphorylase domain E3384_22385 IPR029058 Alpha/Beta hydrolase fold E3384_22385 IPR002925 Dienelactone hydrolase E3384_22390 IPR023885 4Fe4S-binding SPASM domain E3384_22390 IPR007197 Radical SAM E3384_22390 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme E3384_22390 IPR013785 Aldolase-type TIM barrel E3384_22400 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal E3384_22400 IPR038071 UROD/MetE-like superfamily E3384_22400 IPR006276 Cobalamin-independent methionine synthase E3384_22400 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal E3384_22405 IPR000847 Transcription regulator HTH, LysR E3384_22405 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain E3384_22405 IPR036390 Winged helix DNA-binding domain superfamily E3384_22405 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_22405 IPR005119 LysR, substrate-binding E3384_22410 IPR004779 Carboxylate/Amino Acid/Amine Transporter E3384_22410 IPR000620 EamA domain E3384_22415 IPR006379 HAD-superfamily hydrolase, subfamily IIB E3384_22415 IPR036412 HAD-like superfamily E3384_22415 IPR023214 HAD superfamily E3384_22415 IPR000150 Cof family E3384_22420 IPR029058 Alpha/Beta hydrolase fold E3384_22420 IPR022742 Serine aminopeptidase, S33 E3384_22425 IPR004778 Homoserine/Threonine efflux protein E3384_22425 IPR001123 Amino acid exporter protein, LeuE-type E3384_22430 IPR004778 Homoserine/Threonine efflux protein E3384_22430 IPR001123 Amino acid exporter protein, LeuE-type E3384_22435 IPR018982 RQC domain E3384_22435 IPR004589 DNA helicase, ATP-dependent, RecQ type E3384_22435 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial E3384_22435 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_22435 IPR001650 Helicase, C-terminal E3384_22435 IPR011545 DEAD/DEAH box helicase domain E3384_22435 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_22435 IPR010997 HRDC-like superfamily E3384_22435 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain E3384_22435 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22435 IPR002121 HRDC domain E3384_22440 IPR003187 Phospholipase A1 E3384_22440 IPR036541 Phospholipase A1 superfamily E3384_22445 IPR029069 HotDog domain superfamily E3384_22445 IPR006683 Thioesterase domain E3384_22445 IPR003736 Phenylacetic acid degradation-related domain E3384_22450 IPR000620 EamA domain E3384_22450 IPR004626 RarD protein E3384_22460 IPR024399 Protein of unknown function DUF2628 E3384_22465 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB E3384_22465 IPR004488 Magnesium/cobalt transport protein CorA E3384_22470 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22470 IPR013986 DExx box DNA helicase domain superfamily E3384_22470 IPR005753 DNA helicase, ATP-dependent, UvrD type E3384_22470 IPR014017 UvrD-like DNA helicase, C-terminal E3384_22470 IPR000212 DNA helicase, UvrD/REP type E3384_22470 IPR034739 UvrD/AddA helicase, N-terminal E3384_22470 IPR014016 UvrD-like helicase, ATP-binding domain E3384_22475 IPR036412 HAD-like superfamily E3384_22475 IPR006439 HAD hydrolase, subfamily IA E3384_22475 IPR023214 HAD superfamily E3384_22475 IPR041492 Haloacid dehalogenase-like hydrolase E3384_22480 IPR002104 Integrase, catalytic domain E3384_22480 IPR013762 Integrase-like, catalytic domain superfamily E3384_22480 IPR011010 DNA breaking-rejoining enzyme, catalytic core E3384_22480 IPR004107 Integrase, SAM-like, N-terminal E3384_22480 IPR011931 Tyrosine recombinase XerC E3384_22480 IPR010998 Integrase/recombinase, N-terminal E3384_22480 IPR023009 Tyrosine recombinase XerC/XerD E3384_22485 IPR007435 Protein of unknown function DUF484 E3384_22485 IPR029016 GAF-like domain superfamily E3384_22490 IPR001653 Diaminopimelate epimerase, DapF E3384_22490 IPR018510 Diaminopimelate epimerase, active site E3384_22495 IPR032831 Prokaryotic lipoprotein-attachment site E3384_22510 IPR002908 Frataxin/CyaY E3384_22510 IPR020895 Frataxin conserved site E3384_22510 IPR036524 Frataxin/CyaY superfamily E3384_22530 IPR000274 Adenylate cyclase, class-I E3384_22530 IPR024686 Adenylate cyclase class-I, conserved site E3384_22530 IPR024685 Adenylate cyclase class-I, N-terminal domain E3384_22535 IPR000860 Porphobilinogen deaminase E3384_22535 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily E3384_22535 IPR022418 Porphobilinogen deaminase, C-terminal E3384_22535 IPR022417 Porphobilinogen deaminase, N-terminal E3384_22535 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site E3384_22540 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase E3384_22540 IPR039793 Uroporphyrinogen-III synthase E3384_22540 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily E3384_22545 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX E3384_22550 IPR010817 HemY, N-terminal E3384_22550 IPR013026 Tetratricopeptide repeat-containing domain E3384_22550 IPR011990 Tetratricopeptide-like helical domain superfamily E3384_22550 IPR013105 Tetratricopeptide repeat 2 E3384_22550 IPR019734 Tetratricopeptide repeat E3384_22550 IPR005254 Heme biosynthesis-associated TPR protein E3384_22575 IPR004841 Amino acid permease/ SLC12A domain E3384_22575 IPR004840 Amino acid permease, conserved site E3384_22580 IPR004629 Glycosyl transferase WecB/TagA/CpsF E3384_22580 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase E3384_22585 IPR010691 Probable ECA polymerase WzyE E3384_22590 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase E3384_22595 IPR002797 Polysaccharide biosynthesis protein E3384_22595 IPR032896 Lipid III flippase WzxE E3384_22600 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase E3384_22600 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE E3384_22600 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like E3384_22600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 E3384_22600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain E3384_22600 IPR015424 Pyridoxal phosphate-dependent transferase E3384_22605 IPR000182 GNAT domain E3384_22605 IPR012752 dTDP-fucosamine acetyltransferase WecD E3384_22605 IPR016181 Acyl-CoA N-acyltransferase E3384_22605 IPR002110 Ankyrin repeat E3384_22605 IPR020683 Ankyrin repeat-containing domain E3384_22610 IPR005835 Nucleotidyl transferase domain E3384_22610 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form E3384_22610 IPR029044 Nucleotide-diphospho-sugar transferases E3384_22615 IPR016040 NAD(P)-binding domain E3384_22615 IPR005888 dTDP-glucose 4,6-dehydratase E3384_22615 IPR036291 NAD(P)-binding domain superfamily E3384_22620 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily E3384_22620 IPR017476 UDP-glucose/GDP-mannose dehydrogenase E3384_22620 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation E3384_22620 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal E3384_22620 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal E3384_22620 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase E3384_22620 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC E3384_22620 IPR036291 NAD(P)-binding domain superfamily E3384_22620 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_22625 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain E3384_22625 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB E3384_22625 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like E3384_22630 IPR032895 ECA polysaccharide chain length modulation protein WzzE E3384_22630 IPR003856 Polysaccharide chain length determinant N-terminal domain E3384_22635 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase E3384_22635 IPR000715 Glycosyl transferase, family 4 E3384_22645 IPR036269 Rho termination factor, N-terminal domain superfamily E3384_22645 IPR041703 Transcription termination factor Rho, ATP binding domain E3384_22645 IPR011112 Rho termination factor, N-terminal E3384_22645 IPR012340 Nucleic acid-binding, OB-fold E3384_22645 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22645 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain E3384_22645 IPR011113 Rho termination factor, RNA-binding domain E3384_22645 IPR003593 AAA+ ATPase domain E3384_22645 IPR004665 Transcription termination factor Rho E3384_22645 IPR011129 Cold shock domain E3384_22655 IPR013766 Thioredoxin domain E3384_22655 IPR017937 Thioredoxin, conserved site E3384_22655 IPR005746 Thioredoxin E3384_22655 IPR036249 Thioredoxin-like superfamily E3384_22660 IPR023554 ATP-dependent RNA helicase RhlB type E3384_22660 IPR014014 RNA helicase, DEAD-box type, Q motif E3384_22660 IPR011545 DEAD/DEAH box helicase domain E3384_22660 IPR014001 Helicase superfamily 1/2, ATP-binding domain E3384_22660 IPR001650 Helicase, C-terminal E3384_22660 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22660 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site E3384_22665 IPR030673 Pyrophosphatase, GppA/Ppx-type E3384_22665 IPR003695 Ppx/GppA phosphatase E3384_22665 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase E3384_22670 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22670 IPR014016 UvrD-like helicase, ATP-binding domain E3384_22670 IPR005752 ATP-dependent DNA helicase Rep E3384_22670 IPR000212 DNA helicase, UvrD/REP type E3384_22670 IPR034739 UvrD/AddA helicase, N-terminal E3384_22670 IPR013986 DExx box DNA helicase domain superfamily E3384_22670 IPR014017 UvrD-like DNA helicase, C-terminal E3384_22675 IPR006419 Nicotinamide mononucleotide transporter PnuC E3384_22685 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type E3384_22685 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site E3384_22690 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily E3384_22690 IPR036291 NAD(P)-binding domain superfamily E3384_22690 IPR000506 Ketol-acid reductoisomerase, C-terminal E3384_22690 IPR013023 Ketol-acid reductoisomerase E3384_22690 IPR013328 6-phosphogluconate dehydrogenase, domain 2 E3384_22690 IPR013116 Ketol-acid reductoisomerase, N-terminal E3384_22695 IPR005119 LysR, substrate-binding E3384_22695 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain E3384_22695 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_22695 IPR000847 Transcription regulator HTH, LysR E3384_22695 IPR036390 Winged helix DNA-binding domain superfamily E3384_22710 IPR001926 Pyridoxal-phosphate dependent enzyme E3384_22710 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme E3384_22710 IPR005787 Threonine dehydratase, biosynthetic E3384_22710 IPR038110 Threonine dehydratase, ACT-like domain superfamily E3384_22710 IPR001721 Threonine dehydratase, ACT-like domain E3384_22710 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site E3384_22715 IPR042096 Dihydroxy-acid dehydratase, C-terminal E3384_22715 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site E3384_22715 IPR004404 Dihydroxy-acid dehydratase E3384_22715 IPR037237 IlvD/EDD, N-terminal domain E3384_22715 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase E3384_22720 IPR033939 Branched-chain aminotransferase E3384_22720 IPR005785 Branched-chain amino acid aminotransferase I E3384_22720 IPR036038 Aminotransferase-like, PLP-dependent enzymes E3384_22720 IPR018300 Aminotransferase, class IV, conserved site E3384_22720 IPR001544 Aminotransferase class IV E3384_22725 IPR002912 ACT domain E3384_22730 IPR000399 TPP-binding enzyme, conserved site E3384_22730 IPR012846 Acetolactate synthase, large subunit, biosynthetic E3384_22730 IPR039368 Acetolactate synthase large subunit, TPP binding domain E3384_22730 IPR029035 DHS-like NAD/FAD-binding domain superfamily E3384_22730 IPR029061 Thiamin diphosphate-binding fold E3384_22730 IPR012000 Thiamine pyrophosphate enzyme, central domain E3384_22730 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain E3384_22730 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding E3384_22735 IPR012567 IlvGEDA operon leader peptide E3384_22740 IPR025158 Mg chelatase-related protein, C-terminal domain E3384_22740 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 E3384_22740 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22740 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_22740 IPR003593 AAA+ ATPase domain E3384_22740 IPR000523 Magnesium chelatase ChlI domain E3384_22740 IPR004482 Mg chelatase-related protein E3384_22745 IPR007335 Protein of unknown function DUF413 E3384_22750 IPR005119 LysR, substrate-binding E3384_22750 IPR036390 Winged helix DNA-binding domain superfamily E3384_22750 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_22750 IPR000847 Transcription regulator HTH, LysR E3384_22750 IPR020890 Transcription regulator HTH, HdfR E3384_22785 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_22785 IPR036390 Winged helix DNA-binding domain superfamily E3384_22785 IPR011711 GntR, C-terminal E3384_22785 IPR000524 Transcription regulator HTH, GntR E3384_22785 IPR008920 Transcription regulator FadR/GntR, C-terminal E3384_22790 IPR011701 Major facilitator superfamily E3384_22790 IPR036259 MFS transporter superfamily E3384_22790 IPR020846 Major facilitator superfamily domain E3384_22790 IPR004638 Drug resistance transporter EmrB-like E3384_22795 IPR000843 LacI-type HTH domain E3384_22795 IPR010982 Lambda repressor-like, DNA-binding domain superfamily E3384_22795 IPR028082 Periplasmic binding protein-like I E3384_22800 IPR002139 Ribokinase/fructokinase E3384_22800 IPR011611 Carbohydrate kinase PfkB E3384_22800 IPR011877 Ribokinase E3384_22800 IPR029056 Ribokinase-like E3384_22800 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site E3384_22805 IPR025997 Periplasmic binding protein E3384_22805 IPR028082 Periplasmic binding protein-like I E3384_22810 IPR001851 ABC transporter, permease E3384_22815 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22815 IPR015861 ABC transporter, ribose import, RbsA E3384_22815 IPR017871 ABC transporter, conserved site E3384_22815 IPR003439 ABC transporter-like E3384_22815 IPR003593 AAA+ ATPase domain E3384_22820 IPR023064 D-ribose pyranase E3384_22820 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU E3384_22820 IPR023750 RbsD-like superfamily E3384_22825 IPR023051 Potassium uptake protein, low affinity, Kup E3384_22825 IPR003855 Potassium transporter E3384_22830 IPR011704 ATPase, dynein-related, AAA domain E3384_22830 IPR003593 AAA+ ATPase domain E3384_22830 IPR023671 ATPase RavA E3384_22830 IPR022547 ATPase, RavA, C-terminal E3384_22830 IPR041538 ATPase RavA-like, AAA lid domain E3384_22830 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22835 IPR002035 von Willebrand factor, type A E3384_22835 IPR008912 Uncharacterised protein family CoxE-like E3384_22835 IPR023481 Uncharacterised protein family ViaA E3384_22835 IPR036465 von Willebrand factor A-like domain superfamily E3384_22840 IPR004618 Aspartate--ammonia ligase E3384_22840 IPR006195 Aminoacyl-tRNA synthetase, class II E3384_22845 IPR011008 Dimeric alpha-beta barrel E3384_22845 IPR000485 AsnC-type HTH domain E3384_22845 IPR011991 ArsR-like helix-turn-helix domain E3384_22845 IPR019885 Transcription regulator HTH, AsnC-type, conserved site E3384_22845 IPR019888 Transcription regulator AsnC-type E3384_22845 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_22845 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain E3384_22845 IPR036390 Winged helix DNA-binding domain superfamily E3384_22850 IPR029039 Flavoprotein-like superfamily E3384_22850 IPR008254 Flavodoxin/nitric oxide synthase E3384_22855 IPR020595 MnmG-related, conserved site E3384_22855 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related E3384_22855 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG E3384_22855 IPR026904 GidA associated domain 3 E3384_22855 IPR036188 FAD/NAD(P)-binding domain superfamily E3384_22860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_22860 IPR003682 rRNA small subunit methyltransferase G E3384_22865 IPR005598 ATP synthase protein I E3384_22870 IPR000568 ATP synthase, F0 complex, subunit A E3384_22870 IPR023011 ATP synthase, F0 complex, subunit A, active site E3384_22870 IPR035908 ATP synthase, F0 complex, subunit A superfamily E3384_22875 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast E3384_22875 IPR000454 ATP synthase, F0 complex, subunit C E3384_22875 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site E3384_22875 IPR038662 F1F0 ATP synthase subunit C superfamily E3384_22875 IPR002379 V-ATPase proteolipid subunit C-like domain E3384_22875 IPR035921 F/V-ATP synthase subunit C superfamily E3384_22880 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily E3384_22880 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast E3384_22880 IPR005864 ATP synthase, F0 complex, subunit b, bacterial E3384_22885 IPR020781 ATPase, OSCP/delta subunit, conserved site E3384_22885 IPR000711 ATPase, OSCP/delta subunit E3384_22885 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily E3384_22890 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain E3384_22890 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain E3384_22890 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site E3384_22890 IPR005294 ATP synthase, F1 complex, alpha subunit E3384_22890 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain E3384_22890 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily E3384_22890 IPR000793 ATP synthase, alpha subunit, C-terminal E3384_22890 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily E3384_22890 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily E3384_22890 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22895 IPR000131 ATP synthase, F1 complex, gamma subunit E3384_22895 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily E3384_22895 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site E3384_22900 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain E3384_22900 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily E3384_22900 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22900 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain E3384_22900 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site E3384_22900 IPR005722 ATP synthase, F1 complex, beta subunit E3384_22900 IPR003593 AAA+ ATPase domain E3384_22900 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal E3384_22905 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain E3384_22905 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal E3384_22905 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal E3384_22905 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily E3384_22905 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit E3384_22915 IPR011004 Trimeric LpxA-like superfamily E3384_22915 IPR029044 Nucleotide-diphospho-sugar transferases E3384_22915 IPR025877 MobA-like NTP transferase E3384_22915 IPR018357 Hexapeptide transferase, conserved site E3384_22915 IPR001451 Hexapeptide repeat E3384_22915 IPR038009 GlmU, C-terminal LbH domain E3384_22915 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase E3384_22920 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising E3384_22920 IPR017932 Glutamine amidotransferase type 2 domain E3384_22920 IPR035466 GlmS/AgaS, SIS domain 1 E3384_22920 IPR035490 GlmS/FrlB, SIS domain 2 E3384_22920 IPR029055 Nucleophile aminohydrolases, N-terminal E3384_22920 IPR001347 Sugar isomerase (SIS) E3384_22925 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain E3384_22925 IPR023767 Transcriptional regulator SgrR E3384_22925 IPR039424 Solute-binding protein family 5 E3384_22925 IPR000914 Solute-binding protein family 5 domain E3384_22930 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal E3384_22930 IPR036291 NAD(P)-binding domain superfamily E3384_22935 IPR013011 Phosphotransferase system, EIIB component, type 2 E3384_22935 IPR003501 Phosphotransferase system, EIIB component, type 2/3 E3384_22935 IPR006327 Phosphotransferase system, fructose IIC component E3384_22935 IPR013014 Phosphotransferase system, EIIC component, type 2 E3384_22935 IPR003353 Phosphotransferase system, fructose-specific IIB subunit E3384_22935 IPR003352 Phosphotransferase system, EIIC E3384_22935 IPR036095 PTS system IIB component-like superfamily E3384_22940 IPR024370 PBP domain E3384_22940 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS E3384_22945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_22945 IPR035906 MetI-like superfamily E3384_22945 IPR011864 Phosphate ABC transporter, permease protein PstC E3384_22950 IPR000515 ABC transporter type 1, transmembrane domain MetI-like E3384_22950 IPR035906 MetI-like superfamily E3384_22950 IPR005672 Phosphate transport system permease protein PstA E3384_22955 IPR017871 ABC transporter, conserved site E3384_22955 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22955 IPR003439 ABC transporter-like E3384_22955 IPR005670 Phosphate transport system permease protein 1 E3384_22955 IPR015850 ABC transporter, phosphate import, PstB E3384_22955 IPR003593 AAA+ ATPase domain E3384_22960 IPR028366 Phosphate transport system protein PhoU E3384_22960 IPR026022 PhoU domain E3384_22960 IPR038078 PhoU-like domain superfamily E3384_22965 IPR023214 HAD superfamily E3384_22965 IPR041492 Haloacid dehalogenase-like hydrolase E3384_22965 IPR006439 HAD hydrolase, subfamily IA E3384_22965 IPR036412 HAD-like superfamily E3384_22965 IPR023198 Phosphoglycolate phosphatase-like, domain 2 E3384_22970 IPR006043 Xanthine/uracil/vitamin C permease E3384_22970 IPR026033 Azaguanine-like transporters E3384_22975 IPR005025 NADPH-dependent FMN reductase-like E3384_22975 IPR029039 Flavoprotein-like superfamily E3384_22980 IPR037143 4'-phosphopantetheinyl transferase domain superfamily E3384_22985 IPR005119 LysR, substrate-binding E3384_22985 IPR000847 Transcription regulator HTH, LysR E3384_22985 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain E3384_22985 IPR036390 Winged helix DNA-binding domain superfamily E3384_22985 IPR023746 Transcription regulator HTH, YidZ E3384_22985 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_22990 IPR023697 Multidrug resistance protein MdtL E3384_22990 IPR011701 Major facilitator superfamily E3384_22990 IPR036259 MFS transporter superfamily E3384_22990 IPR020846 Major facilitator superfamily domain E3384_22995 IPR031168 TrmE-type guanine nucleotide-binding domain E3384_22995 IPR027368 tRNA modification GTPase MnmE domain 2 E3384_22995 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 E3384_22995 IPR004520 tRNA modification GTPase MnmE E3384_22995 IPR006073 GTP binding domain E3384_22995 IPR018948 GTP-binding protein TrmE, N-terminal E3384_22995 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_22995 IPR005225 Small GTP-binding protein domain E3384_22995 IPR025867 MnmE, helical domain E3384_23000 IPR038210 Membrane insertase YidC, periplasmic domain E3384_23000 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 E3384_23000 IPR028053 Membrane insertase YidC, N-terminal E3384_23000 IPR038221 YidC, periplasmic domain superfamily E3384_23000 IPR028055 Membrane insertase YidC/Oxa1, C-terminal E3384_23000 IPR019998 Membrane insertase YidC E3384_23005 IPR002696 Putative membrane protein insertion efficiency factor E3384_23010 IPR020568 Ribosomal protein S5 domain 2-type fold E3384_23010 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup E3384_23010 IPR000100 Ribonuclease P E3384_23010 IPR020539 Ribonuclease P, conserved site E3384_23015 IPR020939 Ribosomal protein L34, conserved site E3384_23015 IPR000271 Ribosomal protein L34 E3384_23020 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN E3384_23030 IPR039555 F plasmid transfer operon protein E3384_23030 IPR013766 Thioredoxin domain E3384_23030 IPR036249 Thioredoxin-like superfamily E3384_23030 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB E3384_23035 IPR010927 Type IV conjugative transfer system protein TraH E3384_23040 IPR012931 TraG-like, N-terminal E3384_23050 IPR008874 Enterobacterial TraT complement resistance E3384_23055 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain E3384_23055 IPR022585 TraD coupling protein, N-terminal E3384_23055 IPR014128 Type IV conjugative transfer system, coupling protein TraD E3384_23055 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_23060 IPR040668 TraI, 2B/2B-like domain E3384_23060 IPR014059 Conjugative relaxase, N-terminal E3384_23060 IPR014862 TrwC relaxase E3384_23060 IPR014129 Conjugative transfer relaxase protein TraI E3384_23060 IPR009767 DNA helicase, TraI type E3384_23060 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_23060 IPR040987 TraI, N-terminal subdomain E3384_23070 IPR014125 Type-F conjugative transfer system pilin acetylase TraX E3384_23070 IPR008875 TraX E3384_23080 IPR019661 Replication regulatory protein RepA2 E3384_23090 IPR003446 Plasmid replication initiation, RepA E3384_23090 IPR017837 Plasmid replication initiator, RepA, IncFII type E3384_23120 IPR020449 Transcription regulator HTH, AraC- type E3384_23120 IPR018062 HTH domain AraC-type, conserved site E3384_23120 IPR018060 DNA binding HTH domain, AraC-type E3384_23120 IPR009057 Homeobox-like domain superfamily E3384_23170 IPR037224 PapC, N-terminal domain superfamily E3384_23170 IPR042186 Outer membrane usher protein FimD, plug domain E3384_23170 IPR025949 PapC-like, C-terminal domain E3384_23170 IPR025885 PapC, N-terminal domain E3384_23170 IPR000015 Outer membrane usher protein E3384_23170 IPR018030 Fimbrial membrane usher, conserved site E3384_23175 IPR008962 PapD-like superfamily E3384_23175 IPR016147 Pili assembly chaperone, N-terminal E3384_23175 IPR036316 Pili assembly chaperone, C-terminal domain superfamily E3384_23175 IPR001829 Pili assembly chaperone, bacterial E3384_23175 IPR016148 Pili assembly chaperone, C-terminal E3384_23175 IPR018046 Pili assembly chaperone, conserved site E3384_23175 IPR013783 Immunoglobulin-like fold E3384_23180 IPR001207 Transposase, mutator type E3384_23190 IPR008964 Invasin/intimin cell-adhesion fragments E3384_23190 IPR013117 Intimin, C-terminal E3384_23190 IPR003535 Intimin/invasin bacterial adhesion mediator protein E3384_23190 IPR013783 Immunoglobulin-like fold E3384_23190 IPR038177 Inverse autotransporter, beta-domain superfamily E3384_23190 IPR018392 LysM domain E3384_23190 IPR016186 C-type lectin-like/link domain superfamily E3384_23190 IPR003344 Big-1 (bacterial Ig-like domain 1) domain E3384_23190 IPR024519 Inverse autotransporter, beta-domain E3384_23190 IPR016187 C-type lectin fold E3384_23190 IPR003343 Bacterial Ig-like, group 2 E3384_23200 IPR016032 Signal transduction response regulator, C-terminal effector E3384_23200 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain E3384_23200 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily E3384_23200 IPR000792 Transcription regulator LuxR, C-terminal E3384_23200 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_23210 IPR009956 Post-segregation antitoxin CcdA E3384_23215 IPR002712 Toxin CcdB E3384_23215 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor E3384_23220 IPR016423 Resolvase, Rsv E3384_23220 IPR002104 Integrase, catalytic domain E3384_23220 IPR013762 Integrase-like, catalytic domain superfamily E3384_23220 IPR011010 DNA breaking-rejoining enzyme, catalytic core E3384_23225 IPR006842 Transposase (putative), YhgA-like E3384_23225 IPR010106 Recombination-promoting nuclease RpnA E3384_23235 IPR025669 AAA domain E3384_23235 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_23235 IPR041250 ParA helix turn helix domain E3384_23240 IPR004437 ParB/RepB/Spo0J partition protein E3384_23240 IPR003115 ParB/Sulfiredoxin E3384_23240 IPR014884 ParB protein family, C-terminal E3384_23245 IPR001126 UmuC domain E3384_23245 IPR025188 Domain of unknown function DUF4113 E3384_23245 IPR017961 DNA polymerase, Y-family, little finger domain E3384_23245 IPR036775 DNA polymerase, Y-family, little finger domain superfamily E3384_23255 IPR036590 SOS response associated peptidase-like E3384_23255 IPR003738 SOS response associated peptidase (SRAP) E3384_23260 IPR002052 DNA methylase, N-6 adenine-specific, conserved site E3384_23260 IPR002941 DNA methylase N-4/N-6 E3384_23260 IPR001091 Restriction/modification DNA-methylase E3384_23260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase E3384_23270 IPR009811 Protein of unknown function DUF1380 E3384_23305 IPR012340 Nucleic acid-binding, OB-fold E3384_23305 IPR000424 Primosome PriB/single-strand DNA-binding E3384_23305 IPR011344 Single-stranded DNA-binding protein E3384_23310 IPR038612 YkfF-like domain superfamily E3384_23310 IPR009253 Protein of unknown function DUF905 E3384_23315 IPR003115 ParB/Sulfiredoxin E3384_23315 IPR004437 ParB/RepB/Spo0J partition protein E3384_23315 IPR036086 ParB/Sulfiredoxin superfamily E3384_23320 IPR038131 Protein PsiB-like superfamily E3384_23320 IPR009385 Protein PsiB E3384_23325 IPR009713 Uncharacterised protein family PsiA E3384_23360 IPR042297 Antirestriction domain superfamily E3384_23360 IPR004914 Antirestriction protein E3384_23365 IPR008258 Transglycosylase SLT domain 1 E3384_23365 IPR023346 Lysozyme-like domain superfamily E3384_23370 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily E3384_23370 IPR042073 TraM, DNA-binding domain E3384_23370 IPR007925 Relaxosome protein TraM E3384_23375 IPR036388 Winged helix-like DNA-binding domain superfamily E3384_23375 IPR000792 Transcription regulator LuxR, C-terminal E3384_23375 IPR016032 Signal transduction response regulator, C-terminal effector E3384_23380 IPR008876 Relaxosome protein TraY E3384_23385 IPR008873 TraA E3384_23390 IPR009838 Type IV conjugative transfer system, protein TraL E3384_23390 IPR016382 Pilus assembly, TraL E3384_23395 IPR007973 Pilus assembly TraE E3384_23405 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI E3384_23420 IPR014118 Type IV conjugative transfer system protein TraV E3384_23425 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase E3384_23425 IPR027417 P-loop containing nucleoside triphosphate hydrolase E3384_23425 IPR014117 Type-IV secretion system protein TraC E3384_23430 IPR014115 Type-F conjugative transfer system protein TrbI E3384_23435 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain E3384_23435 IPR014114 Type-F conjugative transfer system protein TraW E3384_23440 IPR009649 TraU E3384_23450 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC E3384_23450 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup