locus-tag class description CS348_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_00005 IPR010921 Trp repressor/replication initiator CS348_00005 IPR003593 AAA+ ATPase domain CS348_00005 IPR001957 Chromosomal replication control, initiator DnaA CS348_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CS348_00005 IPR013317 Chromosomal replication initiator protein DnaA CS348_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal CS348_00005 IPR020591 Chromosomal replication control, initiator DnaA-like CS348_00005 IPR038454 DnaA, N-terminal domain superfamily CS348_00005 IPR024633 DnaA N-terminal domain CS348_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CS348_00010 IPR022637 DNA polymerase III, beta sliding clamp, central CS348_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CS348_00010 IPR001001 DNA polymerase III, beta sliding clamp CS348_00015 IPR003395 RecF/RecN/SMC, N-terminal CS348_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_00015 IPR042174 DNA-binding RecF, domain 2 CS348_00015 IPR001238 DNA-binding, RecF CS348_00015 IPR018078 DNA-binding, RecF, conserved site CS348_00020 IPR003594 Histidine kinase/HSP90-like ATPase CS348_00020 IPR001241 DNA topoisomerase, type IIA CS348_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_00020 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CS348_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CS348_00020 IPR011557 DNA gyrase, subunit B CS348_00020 IPR041423 DNA gyrase subunit B insert domain CS348_00020 IPR002288 DNA gyrase B subunit, C-terminal CS348_00020 IPR018522 DNA topoisomerase, type IIA, conserved site CS348_00020 IPR006171 TOPRIM domain CS348_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain CS348_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CS348_00035 IPR023214 HAD superfamily CS348_00035 IPR006379 HAD-superfamily hydrolase, subfamily IIB CS348_00035 IPR036412 HAD-like superfamily CS348_00035 IPR000150 Cof family CS348_00055 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_00055 IPR036641 HPT domain superfamily CS348_00055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_00055 IPR001789 Signal transduction response regulator, receiver domain CS348_00055 IPR038188 TorS, sensor domain superfamily CS348_00055 IPR011006 CheY-like superfamily CS348_00055 IPR003660 HAMP domain CS348_00055 IPR003594 Histidine kinase/HSP90-like ATPase CS348_00055 IPR005467 Histidine kinase domain CS348_00055 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_00055 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CS348_00055 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_00055 IPR037952 Sensor histidine kinase TorS, sensor domain CS348_00060 IPR014301 TMAO reductase system, periplasmic protein TorT CS348_00060 IPR028082 Periplasmic binding protein-like I CS348_00060 IPR001761 Periplasmic binding protein/LacI sugar binding domain CS348_00065 IPR001789 Signal transduction response regulator, receiver domain CS348_00065 IPR011006 CheY-like superfamily CS348_00065 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_00065 IPR039420 Transcriptional regulatory protein WalR-like CS348_00065 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_00070 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK CS348_00070 IPR005126 NapC/NirT cytochrome c, N-terminal CS348_00070 IPR036280 Multiheme cytochrome superfamily CS348_00070 IPR011031 Multihaem cytochrome CS348_00070 IPR038266 NapC/NirT cytochrome c superfamily CS348_00075 IPR006657 Molybdopterin dinucleotide-binding domain CS348_00075 IPR041460 Molybdopterin oxidoreductase, N-terminal CS348_00075 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_00075 IPR006656 Molybdopterin oxidoreductase CS348_00075 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_00075 IPR011887 Trimethylamine-N-oxide reductase TorA CS348_00075 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase CS348_00075 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain CS348_00075 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_00080 IPR036411 TorD-like superfamily CS348_00080 IPR020945 DMSO/Nitrate reductase chaperone CS348_00080 IPR023069 Chaperone TorD CS348_00080 IPR036386 HscB, C-terminal domain superfamily CS348_00085 IPR036909 Cytochrome c-like domain superfamily CS348_00085 IPR025992 Haem-binding domain CS348_00085 IPR009056 Cytochrome c-like domain CS348_00085 IPR004852 Di-haem cytochrome c peroxidase CS348_00090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_00090 IPR005895 ABC transporter, haem export, CcmA CS348_00090 IPR003439 ABC transporter-like CS348_00090 IPR017871 ABC transporter, conserved site CS348_00090 IPR003593 AAA+ ATPase domain CS348_00095 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CS348_00095 IPR003544 Cytochrome c-type biogenesis protein CcmB CS348_00100 IPR003557 Cytochrome c-type biogenesis protein CcmC CS348_00100 IPR002541 Cytochrome c assembly protein CS348_00105 IPR007078 Haem exporter protein D (CcmD) CS348_00110 IPR036127 CcmE-like superfamily CS348_00110 IPR004329 CcmE/CycJ protein CS348_00115 IPR003568 Cytochrome c-type biogenesis protein CcmF CS348_00115 IPR003567 Cytochrome c-type biogenesis protein CS348_00115 IPR002541 Cytochrome c assembly protein CS348_00115 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CS348_00120 IPR013766 Thioredoxin domain CS348_00120 IPR017937 Thioredoxin, conserved site CS348_00120 IPR013740 Redoxin CS348_00120 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CS348_00120 IPR036249 Thioredoxin-like superfamily CS348_00125 IPR019734 Tetratricopeptide repeat CS348_00125 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_00125 IPR013026 Tetratricopeptide repeat-containing domain CS348_00125 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CS348_00125 IPR005616 CcmH/CycL/Ccl2/NrfF family CS348_00130 IPR011659 WD40-like Beta Propeller CS348_00130 IPR022223 Protein of unknown function DUF3748 CS348_00130 IPR011042 Six-bladed beta-propeller, TolB-like CS348_00135 IPR010780 Protein of unknown function DUF1375 CS348_00140 IPR002068 Alpha crystallin/Hsp20 domain CS348_00140 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain CS348_00140 IPR008978 HSP20-like chaperone CS348_00140 IPR023728 Small heat shock protein IbpA CS348_00145 IPR002068 Alpha crystallin/Hsp20 domain CS348_00145 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain CS348_00145 IPR008978 HSP20-like chaperone CS348_00145 IPR022848 Small heat shock protein IbpB CS348_00150 IPR006037 Regulator of K+ conductance, C-terminal CS348_00150 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CS348_00150 IPR023018 Transport protein YidE, putative CS348_00150 IPR006512 YidE/YbjL duplication CS348_00155 IPR003807 Domain of unknown function DUF202 CS348_00160 IPR003807 Domain of unknown function DUF202 CS348_00165 IPR013785 Aldolase-type TIM barrel CS348_00170 IPR011780 D-serine ammonia-lyase CS348_00170 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CS348_00170 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CS348_00170 IPR001926 Pyridoxal-phosphate dependent enzyme CS348_00175 IPR003474 Gluconate transporter CS348_00180 IPR036390 Winged helix DNA-binding domain superfamily CS348_00180 IPR005119 LysR, substrate-binding CS348_00180 IPR011781 D-serine deaminase transcriptional activator CS348_00180 IPR000847 Transcription regulator HTH, LysR CS348_00180 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_00190 IPR011701 Major facilitator superfamily CS348_00190 IPR004734 Multidrug resistance protein CS348_00190 IPR036259 MFS transporter superfamily CS348_00190 IPR020846 Major facilitator superfamily domain CS348_00200 IPR025211 Toxin TisB, type I toxin-antitoxin system CS348_00210 IPR012566 IlvB leader peptide CS348_00215 IPR000399 TPP-binding enzyme, conserved site CS348_00215 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CS348_00215 IPR012000 Thiamine pyrophosphate enzyme, central domain CS348_00215 IPR029061 Thiamin diphosphate-binding fold CS348_00215 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CS348_00215 IPR029035 DHS-like NAD/FAD-binding domain superfamily CS348_00215 IPR039368 Acetolactate synthase large subunit, TPP binding domain CS348_00215 IPR012846 Acetolactate synthase, large subunit, biosynthetic CS348_00220 IPR004789 Acetolactate synthase, small subunit CS348_00220 IPR002912 ACT domain CS348_00220 IPR039557 AHAS, ACT domain CS348_00225 IPR001034 DeoR-type HTH domain CS348_00225 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_00225 IPR037171 NagB/RpiA transferase-like CS348_00225 IPR014036 DeoR C-terminal sensor domain CS348_00230 IPR029056 Ribokinase-like CS348_00230 IPR011611 Carbohydrate kinase PfkB CS348_00230 IPR011877 Ribokinase CS348_00230 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_00230 IPR002139 Ribokinase/fructokinase CS348_00235 IPR036259 MFS transporter superfamily CS348_00235 IPR020846 Major facilitator superfamily domain CS348_00235 IPR011701 Major facilitator superfamily CS348_00235 IPR005275 L-fucose permease FucP CS348_00245 IPR001789 Signal transduction response regulator, receiver domain CS348_00245 IPR000792 Transcription regulator LuxR, C-terminal CS348_00245 IPR016032 Signal transduction response regulator, C-terminal effector CS348_00245 IPR011006 CheY-like superfamily CS348_00250 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CS348_00250 IPR007895 MASE1 CS348_00250 IPR005467 Histidine kinase domain CS348_00250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_00250 IPR003594 Histidine kinase/HSP90-like ATPase CS348_00255 IPR020846 Major facilitator superfamily domain CS348_00255 IPR036259 MFS transporter superfamily CS348_00255 IPR021159 Glycerate/sugar phosphate transporter, conserved site CS348_00255 IPR000849 Sugar phosphate transporter CS348_00255 IPR011701 Major facilitator superfamily CS348_00260 IPR036259 MFS transporter superfamily CS348_00260 IPR020846 Major facilitator superfamily domain CS348_00260 IPR011701 Major facilitator superfamily CS348_00260 IPR021159 Glycerate/sugar phosphate transporter, conserved site CS348_00260 IPR000849 Sugar phosphate transporter CS348_00265 IPR009587 Protein of unknown function DUF1198 CS348_00275 IPR036634 PRD domain superfamily CS348_00275 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_00275 IPR013011 Phosphotransferase system, EIIB component, type 2 CS348_00275 IPR036095 PTS system IIB component-like superfamily CS348_00275 IPR002178 PTS EIIA type-2 domain CS348_00275 IPR013196 Helix-turn-helix, type 11 CS348_00275 IPR007737 Mga helix-turn-helix domain CS348_00275 IPR011608 PRD domain CS348_00275 IPR016152 Phosphotransferase/anion transporter CS348_00280 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CS348_00280 IPR013011 Phosphotransferase system, EIIB component, type 2 CS348_00280 IPR036095 PTS system IIB component-like superfamily CS348_00285 IPR004703 Phosphotransferase system, sugar-specific permease component CS348_00285 IPR013014 Phosphotransferase system, EIIC component, type 2 CS348_00285 IPR013853 Galactitol permease IIC component CS348_00295 IPR013785 Aldolase-type TIM barrel CS348_00295 IPR000771 Fructose-bisphosphate aldolase, class-II CS348_00295 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 CS348_00320 IPR036259 MFS transporter superfamily CS348_00320 IPR023680 Purine ribonucleoside efflux pump, NepI CS348_00320 IPR020846 Major facilitator superfamily domain CS348_00320 IPR011701 Major facilitator superfamily CS348_00325 IPR018120 Glycoside hydrolase family 1, active site CS348_00325 IPR017853 Glycoside hydrolase superfamily CS348_00325 IPR001360 Glycoside hydrolase family 1 CS348_00335 IPR004701 Phosphotransferase system, mannose-type IIA component CS348_00335 IPR036634 PRD domain superfamily CS348_00335 IPR011608 PRD domain CS348_00335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_00335 IPR003593 AAA+ ATPase domain CS348_00335 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CS348_00335 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_00345 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CS348_00345 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily CS348_00345 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CS348_00345 IPR033887 PTS system mannose/sorbose specific IIA subunit CS348_00345 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CS348_00345 IPR004701 Phosphotransferase system, mannose-type IIA component CS348_00345 IPR013789 Phosphotransferase system, mannose family IIA component CS348_00350 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit CS348_00355 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CS348_00360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_00360 IPR015424 Pyridoxal phosphate-dependent transferase CS348_00360 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like CS348_00360 IPR018319 L-seryl-tRNA selenium transferase-like CS348_00365 IPR013785 Aldolase-type TIM barrel CS348_00365 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase CS348_00370 IPR010106 Recombination-promoting nuclease RpnA CS348_00370 IPR006842 Transposase (putative), YhgA-like CS348_00375 IPR000620 EamA domain CS348_00380 IPR003416 MgtC/SapB/SrpB/YhiD family CS348_00385 IPR023298 P-type ATPase, transmembrane domain superfamily CS348_00385 IPR018303 P-type ATPase, phosphorylation site CS348_00385 IPR023214 HAD superfamily CS348_00385 IPR001757 P-type ATPase CS348_00385 IPR006068 Cation-transporting P-type ATPase, C-terminal CS348_00385 IPR006415 P-type ATPase, subfamily IIIB CS348_00385 IPR036412 HAD-like superfamily CS348_00385 IPR004014 Cation-transporting P-type ATPase, N-terminal CS348_00385 IPR023299 P-type ATPase, cytoplasmic domain N CS348_00385 IPR008250 P-type ATPase, A domain superfamily CS348_00405 IPR000868 Isochorismatase-like CS348_00405 IPR036380 Isochorismatase-like superfamily CS348_00415 IPR016032 Signal transduction response regulator, C-terminal effector CS348_00415 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_00415 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_00425 IPR011050 Pectin lyase fold/virulence factor CS348_00425 IPR012332 P22 tailspike-like, C-terminal domain superfamily CS348_00425 IPR005546 Autotransporter beta-domain CS348_00425 IPR006315 Outer membrane autotransporter barrel CS348_00425 IPR036709 Autotransporter beta-domain superfamily CS348_00430 IPR016032 Signal transduction response regulator, C-terminal effector CS348_00430 IPR000792 Transcription regulator LuxR, C-terminal CS348_00465 IPR036259 MFS transporter superfamily CS348_00465 IPR001927 Sodium:galactoside symporter CS348_00465 IPR018043 Sodium:galactoside symporter, conserved site CS348_00465 IPR039672 Lactose permease-like CS348_00470 IPR011013 Galactose mutarotase-like domain superfamily CS348_00470 IPR000322 Glycoside hydrolase family 31 CS348_00470 IPR017853 Glycoside hydrolase superfamily CS348_00470 IPR013780 Glycosyl hydrolase, all-beta CS348_00470 IPR025887 Glycoside hydrolase family 31, N-terminal domain CS348_00475 IPR007844 AsmA CS348_00480 IPR006043 Xanthine/uracil/vitamin C permease CS348_00480 IPR006042 Xanthine/uracil permease CS348_00485 IPR004445 Sodium/glutamate symport carrier protein GltS CS348_00490 IPR033454 RecG, wedge domain CS348_00490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_00490 IPR012340 Nucleic acid-binding, OB-fold CS348_00490 IPR001650 Helicase, C-terminal CS348_00490 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_00490 IPR011545 DEAD/DEAH box helicase domain CS348_00490 IPR004609 ATP-dependent DNA helicase RecG CS348_00495 IPR001537 tRNA/rRNA methyltransferase, SpoU type CS348_00495 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal CS348_00495 IPR029028 Alpha/beta knot methyltransferases CS348_00495 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CS348_00495 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase CS348_00500 IPR033655 RelA, TGS domain CS348_00500 IPR004095 TGS CS348_00500 IPR007685 RelA/SpoT CS348_00500 IPR002912 ACT domain CS348_00500 IPR012675 Beta-grasp domain superfamily CS348_00500 IPR003607 HD/PDEase domain CS348_00500 IPR004811 RelA/SpoT family CS348_00500 IPR012676 TGS-like CS348_00505 IPR006110 RNA polymerase, subunit omega/K/RPB6 CS348_00505 IPR012293 RNA polymerase subunit, RPB6/omega CS348_00505 IPR036161 RPB6/omega subunit-like superfamily CS348_00505 IPR003716 DNA-directed RNA polymerase, omega subunit CS348_00510 IPR008144 Guanylate kinase-like domain CS348_00510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_00510 IPR020590 Guanylate kinase, conserved site CS348_00510 IPR017665 Guanylate kinase CS348_00510 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CS348_00515 IPR020923 DNA ligase B CS348_00515 IPR033136 NAD-dependent DNA ligase, conserved site CS348_00515 IPR013840 NAD-dependent DNA ligase, N-terminal CS348_00515 IPR018239 NAD-dependent DNA ligase, active site CS348_00515 IPR012340 Nucleic acid-binding, OB-fold CS348_00515 IPR013839 NAD-dependent DNA ligase, adenylation CS348_00515 IPR004150 NAD-dependent DNA ligase, OB-fold CS348_00515 IPR010994 RuvA domain 2-like CS348_00520 IPR005115 Uncharacterised domain UPF0126 CS348_00530 IPR005119 LysR, substrate-binding CS348_00530 IPR000847 Transcription regulator HTH, LysR CS348_00530 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_00530 IPR036390 Winged helix DNA-binding domain superfamily CS348_00535 IPR013551 Domain of unknown function DUF1732 CS348_00535 IPR013527 YicC-like, N-terminal CS348_00535 IPR005229 Conserved hypothetical protein CHP00255 CS348_00545 IPR015847 Exoribonuclease, phosphorolytic domain 2 CS348_00545 IPR036345 Exoribonuclease, PH domain 2 superfamily CS348_00545 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_00545 IPR018336 Ribonuclease PH, conserved site CS348_00545 IPR002381 Ribonuclease PH, bacterial-type CS348_00545 IPR001247 Exoribonuclease, phosphorolytic domain 1 CS348_00545 IPR027408 PNPase/RNase PH domain superfamily CS348_00550 IPR029057 Phosphoribosyltransferase-like CS348_00550 IPR000836 Phosphoribosyltransferase domain CS348_00550 IPR023031 Orotate phosphoribosyltransferase CS348_00550 IPR004467 Orotate phosphoribosyl transferase domain CS348_00555 IPR001647 DNA-binding HTH domain, TetR-type CS348_00555 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CS348_00555 IPR023769 Nucleoid occlusion factor SlmA CS348_00555 IPR009057 Homeobox-like domain superfamily CS348_00555 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_00560 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CS348_00560 IPR036157 dUTPase-like superfamily CS348_00560 IPR033704 dUTPase, trimeric CS348_00560 IPR029054 dUTPase-like CS348_00565 IPR035929 CoaB-like superfamily CS348_00565 IPR003382 Flavoprotein CS348_00565 IPR036551 Flavin prenyltransferase-like CS348_00565 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CS348_00565 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CS348_00570 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily CS348_00570 IPR025657 RadC-like JAB domain CS348_00570 IPR020891 Uncharacterised protein family UPF0758, conserved site CS348_00570 IPR037518 MPN domain CS348_00570 IPR001405 Uncharacterised protein family UPF0758 CS348_00570 IPR010994 RuvA domain 2-like CS348_00575 IPR026569 Ribosomal protein L28/L24 CS348_00575 IPR034704 L28p-like CS348_00575 IPR037147 Ribosomal protein L28/L24 superfamily CS348_00575 IPR001383 Ribosomal protein L28 CS348_00580 IPR011332 Zinc-binding ribosomal protein CS348_00580 IPR018264 Ribosomal protein L33, conserved site CS348_00580 IPR001705 Ribosomal protein L33 CS348_00580 IPR038584 Ribosomal protein L33 superfamily CS348_00585 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CS348_00585 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CS348_00585 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CS348_00585 IPR020629 Formamidopyrimidine-DNA glycosylase CS348_00585 IPR010663 Zinc finger, FPG/IleRS-type CS348_00585 IPR010979 Ribosomal protein S13-like, H2TH CS348_00585 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CS348_00585 IPR035937 MutM-like, N-terminal CS348_00590 IPR001980 Phosphopantetheine adenylyltransferase CS348_00590 IPR004821 Cytidyltransferase-like domain CS348_00590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_00595 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily CS348_00595 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CS348_00595 IPR039901 3-deoxy-D-manno-octulosonic acid transferase CS348_00600 IPR002201 Glycosyl transferase, family 9 CS348_00600 IPR011916 Lipopolysaccharide heptosyltransferase III, putative CS348_00605 IPR001296 Glycosyl transferase, family 1 CS348_00605 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CS348_00610 IPR011009 Protein kinase-like domain superfamily CS348_00610 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP CS348_00615 IPR012477 Glycosyltransferase family 52 CS348_00620 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CS348_00620 IPR001296 Glycosyl transferase, family 1 CS348_00625 IPR029044 Nucleotide-diphospho-sugar transferases CS348_00625 IPR002495 Glycosyl transferase, family 8 CS348_00625 IPR013645 Glycosyl transferase, family 8, C-terminal CS348_00630 IPR029044 Nucleotide-diphospho-sugar transferases CS348_00630 IPR002495 Glycosyl transferase, family 8 CS348_00630 IPR013645 Glycosyl transferase, family 8, C-terminal CS348_00635 IPR011009 Protein kinase-like domain superfamily CS348_00635 IPR009330 Lipopolysaccharide core heptose(II) kinase CS348_00640 IPR031026 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ CS348_00645 IPR001296 Glycosyl transferase, family 1 CS348_00650 IPR007016 O-antigen ligase-related CS348_00655 IPR011908 Lipopolysaccharide heptosyltransferase I CS348_00655 IPR002201 Glycosyl transferase, family 9 CS348_00660 IPR002201 Glycosyl transferase, family 9 CS348_00660 IPR011910 ADP-heptose--LPS heptosyltransferase 2 CS348_00665 IPR036291 NAD(P)-binding domain superfamily CS348_00665 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CS348_00665 IPR001509 NAD-dependent epimerase/dehydratase CS348_00670 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase CS348_00670 IPR015424 Pyridoxal phosphate-dependent transferase CS348_00670 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CS348_00670 IPR004839 Aminotransferase, class I/classII CS348_00670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_00670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_00675 IPR036291 NAD(P)-binding domain superfamily CS348_00675 IPR013149 Alcohol dehydrogenase, C-terminal CS348_00675 IPR013154 Alcohol dehydrogenase, N-terminal CS348_00675 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CS348_00675 IPR004627 L-threonine 3-dehydrogenase CS348_00675 IPR020843 Polyketide synthase, enoylreductase domain CS348_00675 IPR011032 GroES-like superfamily CS348_00680 IPR001173 Glycosyltransferase 2-like CS348_00680 IPR029044 Nucleotide-diphospho-sugar transferases CS348_00685 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CS348_00685 IPR006837 Divergent polysaccharide deacetylase CS348_00690 IPR011055 Duplicated hybrid motif CS348_00690 IPR016047 Peptidase M23 CS348_00695 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily CS348_00695 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent CS348_00695 IPR017850 Alkaline-phosphatase-like, core domain superfamily CS348_00695 IPR011258 BPG-independent PGAM, N-terminal CS348_00695 IPR006124 Metalloenzyme CS348_00700 IPR001763 Rhodanese-like domain CS348_00700 IPR036873 Rhodanese-like domain superfamily CS348_00705 IPR002109 Glutaredoxin CS348_00705 IPR011767 Glutaredoxin active site CS348_00705 IPR011900 Glutaredoxin, GrxC CS348_00705 IPR036249 Thioredoxin-like superfamily CS348_00705 IPR014025 Glutaredoxin subgroup CS348_00710 IPR035958 SecB-like superfamily CS348_00710 IPR003708 Bacterial protein export chaperone SecB CS348_00715 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CS348_00715 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CS348_00715 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_00715 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_00715 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CS348_00715 IPR036291 NAD(P)-binding domain superfamily CS348_00720 IPR010493 Serine acetyltransferase, N-terminal CS348_00720 IPR005881 Serine O-acetyltransferase CS348_00720 IPR001451 Hexapeptide repeat CS348_00720 IPR011004 Trimeric LpxA-like superfamily CS348_00720 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CS348_00720 IPR018357 Hexapeptide transferase, conserved site CS348_00725 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CS348_00725 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CS348_00725 IPR001537 tRNA/rRNA methyltransferase, SpoU type CS348_00725 IPR029028 Alpha/beta knot methyltransferases CS348_00730 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CS348_00730 IPR037396 FMN hydroxy acid dehydrogenase domain CS348_00730 IPR020920 L-lactate dehydrogenase, bacterial CS348_00730 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CS348_00730 IPR000262 FMN-dependent dehydrogenase CS348_00730 IPR013785 Aldolase-type TIM barrel CS348_00735 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_00735 IPR000524 Transcription regulator HTH, GntR CS348_00735 IPR008920 Transcription regulator FadR/GntR, C-terminal CS348_00735 IPR011711 GntR, C-terminal CS348_00735 IPR036390 Winged helix DNA-binding domain superfamily CS348_00740 IPR003804 L-lactate permease CS348_00745 IPR008635 Coiled stalk of trimeric autotransporter adhesin CS348_00745 IPR024973 ESPR domain CS348_00745 IPR008640 Head domain of trimeric autotransporter adhesin CS348_00745 IPR011049 Serralysin-like metalloprotease, C-terminal CS348_00745 IPR005594 YadA-like, C-terminal CS348_00750 IPR037125 Lipoprotein YajI-like superfamily CS348_00750 IPR021658 Domain of unknown function DUF3251 CS348_00760 IPR021230 Protein of unknown function DUF2810 CS348_00770 IPR038026 MtlR-like superfamily CS348_00770 IPR007761 Mannitol repressor MtlR-like CS348_00775 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_00775 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_00775 IPR036291 NAD(P)-binding domain superfamily CS348_00775 IPR023027 Mannitol dehydrogenase, conserved site CS348_00775 IPR013118 Mannitol dehydrogenase, C-terminal CS348_00775 IPR023028 Mannitol-1-phosphate 5-dehydrogenase CS348_00775 IPR000669 Mannitol dehydrogenase CS348_00775 IPR013131 Mannitol dehydrogenase, N-terminal CS348_00780 IPR016152 Phosphotransferase/anion transporter CS348_00780 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CS348_00780 IPR013014 Phosphotransferase system, EIIC component, type 2 CS348_00780 IPR013011 Phosphotransferase system, EIIB component, type 2 CS348_00780 IPR003352 Phosphotransferase system, EIIC CS348_00780 IPR002178 PTS EIIA type-2 domain CS348_00780 IPR029503 Phosphotransferase system EIIB component, mannitol-specific CS348_00780 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC CS348_00780 IPR036095 PTS system IIB component-like superfamily CS348_00785 IPR034343 Uncharacterized GST-like protein YibF CS348_00785 IPR010987 Glutathione S-transferase, C-terminal-like CS348_00785 IPR036249 Thioredoxin-like superfamily CS348_00785 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CS348_00785 IPR004045 Glutathione S-transferase, N-terminal CS348_00785 IPR004046 Glutathione S-transferase, C-terminal CS348_00790 IPR015424 Pyridoxal phosphate-dependent transferase CS348_00790 IPR018319 L-seryl-tRNA selenium transferase-like CS348_00790 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain CS348_00790 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_00790 IPR004534 L-seryl-tRNA(Sec) selenium transferase CS348_00795 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CS348_00795 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_00795 IPR004535 Translation elongation factor, selenocysteine-specific CS348_00795 IPR000795 Transcription factor, GTP-binding domain CS348_00795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_00795 IPR031157 Tr-type G domain, conserved site CS348_00795 IPR015191 Translation elongation factor SelB, winged helix, type 3 CS348_00795 IPR004161 Translation elongation factor EFTu-like, domain 2 CS348_00795 IPR036390 Winged helix DNA-binding domain superfamily CS348_00795 IPR015190 Translation elongation factor SelB, winged helix, type 2 CS348_00795 IPR009000 Translation protein, beta-barrel domain superfamily CS348_00800 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CS348_00800 IPR039697 Iron-type alcohol dehydrogenase-like CS348_00800 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CS348_00805 IPR000600 ROK family CS348_00810 IPR015590 Aldehyde dehydrogenase domain CS348_00810 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_00810 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_00810 IPR016161 Aldehyde/histidinol dehydrogenase CS348_00810 IPR016160 Aldehyde dehydrogenase, cysteine active site CS348_00810 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CS348_00815 IPR008928 Six-hairpin glycosidase superfamily CS348_00815 IPR012878 Beta-L-arabinofuranosidase, GH127 CS348_00825 IPR004661 L-ribulose-5-phosphate 4-epimerase CS348_00825 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CS348_00825 IPR001303 Class II aldolase/adducin N-terminal CS348_00830 IPR001719 AP endonuclease 2 CS348_00830 IPR004560 L-ribulose-5-phosphate 3-epimerase CS348_00830 IPR036237 Xylose isomerase-like superfamily CS348_00830 IPR013022 Xylose isomerase-like, TIM barrel domain CS348_00835 IPR011060 Ribulose-phosphate binding barrel CS348_00835 IPR001754 Orotidine 5'-phosphate decarboxylase domain CS348_00835 IPR041710 HPS/KGPDC domain CS348_00835 IPR013785 Aldolase-type TIM barrel CS348_00840 IPR018484 Carbohydrate kinase, FGGY, N-terminal CS348_00840 IPR000577 Carbohydrate kinase, FGGY CS348_00840 IPR018485 Carbohydrate kinase, FGGY, C-terminal CS348_00840 IPR018483 Carbohydrate kinase, FGGY, conserved site CS348_00845 IPR038404 TRAP transporter solute receptor DctP superfamily CS348_00845 IPR004682 TRAP transporter solute receptor, DctP family CS348_00845 IPR018389 TRAP transporter solute receptor DctP/TeaA CS348_00850 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CS348_00850 IPR004681 TRAP transporter large membrane protein DctM CS348_00855 IPR007387 TRAP transporter, small membrane protein DctQ CS348_00860 IPR032344 Protein of unknown function DUF4862 CS348_00860 IPR036237 Xylose isomerase-like superfamily CS348_00865 IPR004375 YhcH/YjgK/YiaL family CS348_00865 IPR037012 YhcH/YjgK/YiaL superfamily CS348_00870 IPR003767 Malate/L-lactate dehydrogenase-like CS348_00870 IPR023689 2,3-diketo-L-gulonate reductase CS348_00870 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily CS348_00875 IPR005471 Transcription regulator IclR, N-terminal CS348_00875 IPR036390 Winged helix DNA-binding domain superfamily CS348_00875 IPR029016 GAF-like domain superfamily CS348_00875 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_00875 IPR014757 Transcription regulator IclR, C-terminal CS348_00880 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_00880 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_00885 IPR004839 Aminotransferase, class I/classII CS348_00885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_00885 IPR015424 Pyridoxal phosphate-dependent transferase CS348_00890 IPR017853 Glycoside hydrolase superfamily CS348_00890 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CS348_00890 IPR014635 Alpha-amylase, MalS type CS348_00895 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CS348_00900 IPR020449 Transcription regulator HTH, AraC- type CS348_00900 IPR028082 Periplasmic binding protein-like I CS348_00900 IPR018062 HTH domain AraC-type, conserved site CS348_00900 IPR009057 Homeobox-like domain superfamily CS348_00900 IPR018060 DNA binding HTH domain, AraC-type CS348_00910 IPR001998 Xylose isomerase CS348_00910 IPR013452 Xylose isomerase, bacterial-type CS348_00910 IPR036237 Xylose isomerase-like superfamily CS348_00915 IPR000577 Carbohydrate kinase, FGGY CS348_00915 IPR006000 Xylulokinase CS348_00915 IPR018485 Carbohydrate kinase, FGGY, C-terminal CS348_00915 IPR018483 Carbohydrate kinase, FGGY, conserved site CS348_00915 IPR018484 Carbohydrate kinase, FGGY, N-terminal CS348_00920 IPR008024 YiaAB two helix CS348_00920 IPR038972 Inner membrane protein YiaA-like CS348_00925 IPR032905 O-acetyltransferase WecH CS348_00925 IPR002656 Acyltransferase 3 CS348_00935 IPR025728 YsaB-like lipoprotein CS348_00940 IPR002310 Glycine-tRNA ligase, alpha subunit CS348_00940 IPR006194 Glycine-tRNA synthetase, heterodimeric CS348_00945 IPR008909 DALR anticodon binding CS348_00945 IPR015944 Glycine-tRNA ligase, beta subunit CS348_00945 IPR006194 Glycine-tRNA synthetase, heterodimeric CS348_00950 IPR036397 Ribonuclease H superfamily CS348_00950 IPR012337 Ribonuclease H-like superfamily CS348_00950 IPR001584 Integrase, catalytic core CS348_00950 IPR038965 Transposase InsF-like CS348_00950 IPR025948 HTH-like domain CS348_00990 IPR011129 Cold shock domain CS348_00990 IPR019844 Cold-shock (CSD) domain CS348_00990 IPR002059 Cold-shock protein, DNA-binding CS348_00990 IPR012340 Nucleic acid-binding, OB-fold CS348_00990 IPR012156 Cold shock, CspA CS348_00995 IPR001387 Cro/C1-type helix-turn-helix domain CS348_00995 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_01000 IPR021413 Protein of unknown function DUF3053 CS348_01005 IPR023756 Glyoxylate/hydroxypyruvate reductase B CS348_01005 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CS348_01005 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CS348_01005 IPR036291 NAD(P)-binding domain superfamily CS348_01005 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS348_01010 IPR006690 Outer membrane protein, OmpA-like, conserved site CS348_01010 IPR036737 OmpA-like domain superfamily CS348_01010 IPR006664 Outer membrane protein, bacterial CS348_01010 IPR039567 Glycine zipper domain CS348_01010 IPR006665 OmpA-like domain CS348_01015 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_01015 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_01015 IPR006656 Molybdopterin oxidoreductase CS348_01015 IPR041460 Molybdopterin oxidoreductase, N-terminal CS348_01015 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain CS348_01015 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase CS348_01015 IPR006657 Molybdopterin dinucleotide-binding domain CS348_01020 IPR016181 Acyl-CoA N-acyltransferase CS348_01020 IPR000182 GNAT domain CS348_01025 IPR005019 Methyladenine glycosylase CS348_01025 IPR004597 DNA-3-methyladenine glycosylase I CS348_01025 IPR011257 DNA glycosylase CS348_01030 IPR036709 Autotransporter beta-domain superfamily CS348_01030 IPR006315 Outer membrane autotransporter barrel CS348_01030 IPR005546 Autotransporter beta-domain CS348_01030 IPR016955 Autotransporter, YhjY, predicted CS348_01035 IPR000917 Sulfatase, N-terminal CS348_01035 IPR040423 Phosphoethanolamine transferase CS348_01035 IPR012549 Phosphoethanolamine transferase, N-terminal CS348_01035 IPR017850 Alkaline-phosphatase-like, core domain superfamily CS348_01065 IPR006043 Xanthine/uracil/vitamin C permease CS348_01065 IPR017588 Uric acid permease UacT-like CS348_01065 IPR006042 Xanthine/uracil permease CS348_01070 IPR039424 Solute-binding protein family 5 CS348_01070 IPR023765 Solute-binding protein family 5, conserved site CS348_01070 IPR030678 Peptide/nickel binding protein, MppA-type CS348_01070 IPR000914 Solute-binding protein family 5 domain CS348_01075 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_01075 IPR035906 MetI-like superfamily CS348_01080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_01080 IPR035906 MetI-like superfamily CS348_01080 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CS348_01085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01085 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CS348_01085 IPR017871 ABC transporter, conserved site CS348_01085 IPR003439 ABC transporter-like CS348_01085 IPR003593 AAA+ ATPase domain CS348_01090 IPR003593 AAA+ ATPase domain CS348_01090 IPR003439 ABC transporter-like CS348_01090 IPR017871 ABC transporter, conserved site CS348_01090 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CS348_01090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01095 IPR018227 Amino acid/polyamine transporter 2 CS348_01105 IPR025253 Type I toxin-antitoxin system, toxin Ldr CS348_01110 IPR017744 Cellulose biosynthesis protein BcsG CS348_01115 IPR019995 Cellulose biosynthesis, BcsF/YhjT CS348_01120 IPR017745 Cellulose biosynthesis protein BcsE CS348_01125 IPR024487 Protein YhjR CS348_01130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01130 IPR017746 Cellulose synthase operon protein BcsQ CS348_01135 IPR029044 Nucleotide-diphospho-sugar transferases CS348_01135 IPR009875 PilZ domain CS348_01135 IPR005150 Cellulose synthase CS348_01135 IPR003919 Cellulose synthase, subunit A CS348_01135 IPR001173 Glycosyltransferase 2-like CS348_01140 IPR008979 Galactose-binding-like domain superfamily CS348_01140 IPR018513 Cellulose synthase BcsB, bacterial CS348_01140 IPR003920 Cellulose synthase, subunit B CS348_01145 IPR019834 Glycoside hydrolase, family 8, conserved site CS348_01145 IPR002037 Glycoside hydrolase, family 8 CS348_01145 IPR008928 Six-hairpin glycosidase superfamily CS348_01145 IPR012341 Six-hairpin glycosidase-like superfamily CS348_01150 IPR008410 Cellulose synthase operon C, C-terminal CS348_01150 IPR013026 Tetratricopeptide repeat-containing domain CS348_01150 IPR019734 Tetratricopeptide repeat CS348_01150 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_01160 IPR000160 GGDEF domain CS348_01160 IPR029787 Nucleotide cyclase CS348_01160 IPR003660 HAMP domain CS348_01160 IPR001633 EAL domain CS348_01160 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 CS348_01160 IPR035919 EAL domain superfamily CS348_01165 IPR036458 Sodium:dicarboxylate symporter superfamily CS348_01165 IPR018107 Sodium:dicarboxylate symporter, conserved site CS348_01165 IPR001991 Sodium:dicarboxylate symporter CS348_01165 IPR023954 C4-dicarboxylate transport protein CS348_01170 IPR007863 Peptidase M16, C-terminal CS348_01170 IPR011765 Peptidase M16, N-terminal CS348_01170 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CS348_01175 IPR029056 Ribokinase-like CS348_01175 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_01175 IPR011611 Carbohydrate kinase PfkB CS348_01180 IPR001633 EAL domain CS348_01180 IPR035919 EAL domain superfamily CS348_01185 IPR007844 AsmA CS348_01190 IPR011701 Major facilitator superfamily CS348_01190 IPR036259 MFS transporter superfamily CS348_01190 IPR005829 Sugar transporter, conserved site CS348_01190 IPR004736 MFS transporter, metabolite:H symporter CS348_01190 IPR020846 Major facilitator superfamily domain CS348_01190 IPR005828 Major facilitator, sugar transporter-like CS348_01195 IPR005274 Inner membrane protein YhjD CS348_01195 IPR017039 Virulence factor BrkB CS348_01200 IPR005119 LysR, substrate-binding CS348_01200 IPR036390 Winged helix DNA-binding domain superfamily CS348_01200 IPR000847 Transcription regulator HTH, LysR CS348_01200 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_01205 IPR016032 Signal transduction response regulator, C-terminal effector CS348_01205 IPR000792 Transcription regulator LuxR, C-terminal CS348_01220 IPR008928 Six-hairpin glycosidase superfamily CS348_01220 IPR001661 Glycoside hydrolase, family 37 CS348_01220 IPR023715 Trehalase, cytoplasmic CS348_01220 IPR012341 Six-hairpin glycosidase-like superfamily CS348_01220 IPR018232 Glycoside hydrolase, family 37, conserved site CS348_01225 IPR036390 Winged helix DNA-binding domain superfamily CS348_01225 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_01225 IPR011663 UbiC transcription regulator-associated CS348_01225 IPR000524 Transcription regulator HTH, GntR CS348_01225 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CS348_01230 IPR035488 Fructosamine deglycase FrlB, SIS domain 1 CS348_01230 IPR035490 GlmS/FrlB, SIS domain 2 CS348_01230 IPR001347 Sugar isomerase (SIS) CS348_01230 IPR024713 Fructosamine deglycase FrlB CS348_01235 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_01235 IPR011611 Carbohydrate kinase PfkB CS348_01235 IPR029056 Ribokinase-like CS348_01240 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CS348_01245 IPR036152 Asparaginase/glutaminase-like superfamily CS348_01245 IPR004550 L-asparaginase, type II CS348_01245 IPR027474 L-asparaginase, N-terminal CS348_01245 IPR027475 Asparaginase/glutaminase, active site 2 CS348_01245 IPR027473 L-asparaginase, C-terminal CS348_01245 IPR037152 L-asparaginase, N-terminal domain superfamily CS348_01245 IPR020827 Asparaginase/glutaminase, active site 1 CS348_01245 IPR040919 Asparaginase/glutaminase, C-terminal CS348_01245 IPR006034 Asparaginase/glutaminase-like CS348_01250 IPR006322 Glutathione reductase, eukaryote/bacterial CS348_01250 IPR023753 FAD/NAD(P)-binding domain CS348_01250 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_01250 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CS348_01250 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CS348_01250 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CS348_01250 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CS348_01255 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_01255 IPR007473 Ribosomal RNA large subunit methyltransferase J CS348_01255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_01260 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CS348_01260 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CS348_01260 IPR033879 Undecaprenyl-diphosphatase CS348_01265 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CS348_01265 IPR001567 Peptidase M3A/M3B catalytic domain CS348_01270 IPR007536 Ribosomal RNA small subunit methyltransferase J CS348_01270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_01275 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B CS348_01275 IPR005279 Dipeptide/tripeptide permease CS348_01275 IPR036259 MFS transporter superfamily CS348_01275 IPR000109 Proton-dependent oligopeptide transporter family CS348_01275 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CS348_01280 IPR006015 Universal stress protein A family CS348_01280 IPR006016 UspA CS348_01280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_01285 IPR019598 Universal stress protein B CS348_01290 IPR001204 Phosphate transporter CS348_01295 IPR023166 HI0933-like insert domain superfamily CS348_01295 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like CS348_01295 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_01300 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CS348_01305 IPR003593 AAA+ ATPase domain CS348_01305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01305 IPR000412 ABC-2 transporter CS348_01305 IPR003439 ABC transporter-like CS348_01305 IPR017871 ABC transporter, conserved site CS348_01310 IPR000412 ABC-2 transporter CS348_01315 IPR014864 Transcription factor, NikR, nickel binding C-terminal CS348_01315 IPR010985 Ribbon-helix-helix CS348_01315 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria CS348_01315 IPR022988 Nickel-responsive transcriptional regulator NikR CS348_01315 IPR002145 Ribbon-helix-helix protein, CopG CS348_01315 IPR013321 Arc-type ribbon-helix-helix CS348_01315 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CS348_01320 IPR008278 4'-phosphopantetheinyl transferase domain CS348_01320 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CS348_01325 IPR002549 Transmembrane protein TqsA-like CS348_01330 IPR036259 MFS transporter superfamily CS348_01330 IPR020846 Major facilitator superfamily domain CS348_01330 IPR011701 Major facilitator superfamily CS348_01330 IPR023008 Uncharacterized MFS-type transporter YhhS-like CS348_01335 IPR014894 Protein DcrB CS348_01335 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich CS348_01340 IPR003744 Queuosine precursor transporter CS348_01345 IPR036868 TusA-like domain superfamily CS348_01345 IPR001455 TusA-like domain CS348_01345 IPR022931 Sulfur carrier protein TusA CS348_01350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CS348_01350 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CS348_01350 IPR004090 Chemotaxis methyl-accepting receptor CS348_01350 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CS348_01350 IPR003660 HAMP domain CS348_01350 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CS348_01355 IPR023299 P-type ATPase, cytoplasmic domain N CS348_01355 IPR006121 Heavy metal-associated domain, HMA CS348_01355 IPR017969 Heavy-metal-associated, conserved site CS348_01355 IPR023298 P-type ATPase, transmembrane domain superfamily CS348_01355 IPR036163 Heavy metal-associated domain superfamily CS348_01355 IPR008250 P-type ATPase, A domain superfamily CS348_01355 IPR036412 HAD-like superfamily CS348_01355 IPR018303 P-type ATPase, phosphorylation site CS348_01355 IPR001757 P-type ATPase CS348_01355 IPR027256 P-type ATPase, subfamily IB CS348_01355 IPR023214 HAD superfamily CS348_01360 IPR012506 YhhN-like CS348_01365 IPR019635 Protein of unknown function DUF2500 CS348_01370 IPR009525 Protein of unknown function DUF1145 CS348_01375 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_01375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_01375 IPR004398 RNA methyltransferase, RsmD CS348_01380 IPR003593 AAA+ ATPase domain CS348_01380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01380 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CS348_01380 IPR013822 Signal recognition particle SRP54, helical bundle CS348_01380 IPR036225 SRP/SRP receptor, N-terminal CS348_01380 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CS348_01380 IPR004390 Signal-recognition particle receptor FtsY CS348_01385 IPR005286 Cell division protein FtsE, ATP-binding CS348_01385 IPR017871 ABC transporter, conserved site CS348_01385 IPR003439 ABC transporter-like CS348_01385 IPR003593 AAA+ ATPase domain CS348_01385 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01390 IPR003838 ABC transporter permease protein domain CS348_01390 IPR040690 FtsX, extracellular domain CS348_01390 IPR004513 Cell division protein FtsX CS348_01395 IPR013324 RNA polymerase sigma factor, region 3/4-like CS348_01395 IPR014284 RNA polymerase sigma-70 like domain CS348_01395 IPR000943 RNA polymerase sigma-70 CS348_01395 IPR007627 RNA polymerase sigma-70 region 2 CS348_01395 IPR007630 RNA polymerase sigma-70 region 4 CS348_01395 IPR013325 RNA polymerase sigma factor, region 2 CS348_01395 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CS348_01400 IPR028081 Leucine-binding protein domain CS348_01400 IPR028082 Periplasmic binding protein-like I CS348_01400 IPR000709 Leu/Ile/Val-binding protein CS348_01410 IPR040448 PanZ, acetyltransferase (GNAT) domain CS348_01410 IPR032900 PanD regulatory factor PanZ CS348_01410 IPR000182 GNAT domain CS348_01410 IPR016181 Acyl-CoA N-acyltransferase CS348_01415 IPR028082 Periplasmic binding protein-like I CS348_01415 IPR000709 Leu/Ile/Val-binding protein CS348_01415 IPR028081 Leucine-binding protein domain CS348_01420 IPR001851 ABC transporter, permease CS348_01425 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CS348_01425 IPR001851 ABC transporter, permease CS348_01430 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CS348_01430 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01430 IPR003593 AAA+ ATPase domain CS348_01430 IPR017871 ABC transporter, conserved site CS348_01430 IPR003439 ABC transporter-like CS348_01435 IPR003439 ABC transporter-like CS348_01435 IPR003593 AAA+ ATPase domain CS348_01435 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CS348_01435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01435 IPR017871 ABC transporter, conserved site CS348_01440 IPR036165 YefM-like superfamily CS348_01440 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CS348_01450 IPR006059 Bacterial extracellular solute-binding protein CS348_01450 IPR006061 Solute-binding family 1, conserved site CS348_01455 IPR035906 MetI-like superfamily CS348_01455 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_01460 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE CS348_01460 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_01460 IPR035906 MetI-like superfamily CS348_01465 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC CS348_01465 IPR003593 AAA+ ATPase domain CS348_01465 IPR003439 ABC transporter-like CS348_01465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01465 IPR008995 Molybdate/tungstate binding, C-terminal CS348_01465 IPR017871 ABC transporter, conserved site CS348_01465 IPR040582 MalK, OB fold domain CS348_01470 IPR030395 Glycerophosphodiester phosphodiesterase domain CS348_01470 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CS348_01475 IPR020158 Protein of unknown function DUF2756 CS348_01480 IPR000101 Gamma-glutamyltranspeptidase CS348_01480 IPR029055 Nucleophile aminohydrolases, N-terminal CS348_01485 IPR001559 Phosphotriesterase CS348_01485 IPR032466 Metal-dependent hydrolase CS348_01485 IPR017947 Aryldialkylphosphatase, zinc-binding site CS348_01500 IPR029056 Ribokinase-like CS348_01500 IPR002139 Ribokinase/fructokinase CS348_01500 IPR011611 Carbohydrate kinase PfkB CS348_01500 IPR011877 Ribokinase CS348_01500 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_01505 IPR000182 GNAT domain CS348_01505 IPR016181 Acyl-CoA N-acyltransferase CS348_01515 IPR036291 NAD(P)-binding domain superfamily CS348_01515 IPR000683 Oxidoreductase, N-terminal CS348_01515 IPR004104 Oxidoreductase, C-terminal CS348_01520 IPR003829 Pirin, N-terminal domain CS348_01520 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain CS348_01520 IPR011051 RmlC-like cupin domain superfamily CS348_01520 IPR014710 RmlC-like jelly roll fold CS348_01520 IPR012093 Pirin CS348_01525 IPR028082 Periplasmic binding protein-like I CS348_01525 IPR000843 LacI-type HTH domain CS348_01525 IPR001761 Periplasmic binding protein/LacI sugar binding domain CS348_01525 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_01530 IPR031322 Shikimate kinase/gluconokinase CS348_01530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01530 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CS348_01535 IPR003474 Gluconate transporter CS348_01545 IPR000534 Semialdehyde dehydrogenase, NAD-binding CS348_01545 IPR036291 NAD(P)-binding domain superfamily CS348_01545 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CS348_01545 IPR012080 Aspartate-semialdehyde dehydrogenase CS348_01545 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type CS348_01545 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CS348_01550 IPR013783 Immunoglobulin-like fold CS348_01550 IPR014756 Immunoglobulin E-set CS348_01550 IPR004193 Glycoside hydrolase, family 13, N-terminal CS348_01550 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta CS348_01550 IPR037439 1,4-alpha-glucan-branching enzyme CS348_01550 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CS348_01550 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CS348_01550 IPR017853 Glycoside hydrolase superfamily CS348_01550 IPR013780 Glycosyl hydrolase, all-beta CS348_01555 IPR014756 Immunoglobulin E-set CS348_01555 IPR013783 Immunoglobulin-like fold CS348_01555 IPR004193 Glycoside hydrolase, family 13, N-terminal CS348_01555 IPR017853 Glycoside hydrolase superfamily CS348_01555 IPR011837 Glycogen debranching enzyme, GlgX type CS348_01555 IPR013780 Glycosyl hydrolase, all-beta CS348_01555 IPR040784 Glycogen debranching enzyme, C-terminal domain CS348_01555 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CS348_01555 IPR022844 Glycogen debranching enzyme, bacterial CS348_01560 IPR011831 Glucose-1-phosphate adenylyltransferase CS348_01560 IPR011004 Trimeric LpxA-like superfamily CS348_01560 IPR029044 Nucleotide-diphospho-sugar transferases CS348_01560 IPR005836 ADP-glucose pyrophosphorylase, conserved site CS348_01560 IPR005835 Nucleotidyl transferase domain CS348_01560 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial CS348_01565 IPR013534 Starch synthase, catalytic domain CS348_01565 IPR011835 Bacterial/plant glycogen synthase CS348_01565 IPR001296 Glycosyl transferase, family 1 CS348_01570 IPR035090 Phosphorylase pyridoxal-phosphate attachment site CS348_01570 IPR000811 Glycosyl transferase, family 35 CS348_01570 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CS348_01575 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily CS348_01575 IPR006076 FAD dependent oxidoreductase CS348_01575 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_01575 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CS348_01575 IPR031656 Alpha-glycerophosphate oxidase, C-terminal CS348_01580 IPR001763 Rhodanese-like domain CS348_01580 IPR036873 Rhodanese-like domain superfamily CS348_01580 IPR023695 Thiosulfate sulfurtransferase, bacterial CS348_01585 IPR038236 GlpG peptidase, N-terminal domain superfamily CS348_01585 IPR022764 Peptidase S54, rhomboid domain CS348_01585 IPR035952 Rhomboid-like superfamily CS348_01585 IPR023662 Rhomboid protease GlpG CS348_01585 IPR022732 Peptidase S54, GlpG peptidase, N-terminal CS348_01590 IPR037171 NagB/RpiA transferase-like CS348_01590 IPR014036 DeoR C-terminal sensor domain CS348_01590 IPR001034 DeoR-type HTH domain CS348_01590 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_01590 IPR036390 Winged helix DNA-binding domain superfamily CS348_01590 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_01595 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_01595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01595 IPR016032 Signal transduction response regulator, C-terminal effector CS348_01595 IPR041617 MalT-like TPR region CS348_01595 IPR023768 Transcriptional regulator HTH-type, MalT CS348_01595 IPR000792 Transcription regulator LuxR, C-terminal CS348_01595 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_01600 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CS348_01600 IPR000811 Glycosyl transferase, family 35 CS348_01600 IPR035090 Phosphorylase pyridoxal-phosphate attachment site CS348_01605 IPR017853 Glycoside hydrolase superfamily CS348_01605 IPR003385 Glycoside hydrolase, family 77 CS348_01610 IPR003474 Gluconate transporter CS348_01615 IPR000361 FeS cluster biogenesis CS348_01615 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CS348_01615 IPR034904 Fe-S cluster assembly domain superfamily CS348_01615 IPR017726 Fe/S biogenesis protein NfuA CS348_01615 IPR035903 HesB-like domain superfamily CS348_01620 IPR005222 Competence protein ComF CS348_01620 IPR000836 Phosphoribosyltransferase domain CS348_01620 IPR029057 Phosphoribosyltransferase-like CS348_01625 IPR029058 Alpha/Beta hydrolase fold CS348_01625 IPR000073 Alpha/beta hydrolase fold-1 CS348_01625 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase CS348_01630 IPR006842 Transposase (putative), YhgA-like CS348_01630 IPR010106 Recombination-promoting nuclease RpnA CS348_01635 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_01635 IPR023732 Probable [Fe-S]-dependent transcriptional repressor CS348_01635 IPR015102 Transcriptional regulator HTH-type, FeoC CS348_01635 IPR036390 Winged helix DNA-binding domain superfamily CS348_01640 IPR011640 Ferrous iron transport protein B, C-terminal CS348_01640 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CS348_01640 IPR041069 FeoB, cytosolic helical domain CS348_01640 IPR005225 Small GTP-binding protein domain CS348_01640 IPR030389 FeoB-type guanine nucleotide-binding (G) domain CS348_01640 IPR003373 Ferrous iron transport protein B CS348_01640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01645 IPR008988 Transcriptional repressor, C-terminal CS348_01645 IPR038157 Ferrous iron transporter, core domain CS348_01645 IPR007167 Ferrous iron transporter FeoA domain CS348_01655 IPR018974 Tex-like protein, N-terminal CS348_01655 IPR037027 YqgF/RNase H-like domain superfamily CS348_01655 IPR041692 HHH domain 9 CS348_01655 IPR012340 Nucleic acid-binding, OB-fold CS348_01655 IPR012337 Ribonuclease H-like superfamily CS348_01655 IPR010994 RuvA domain 2-like CS348_01655 IPR022967 RNA-binding domain, S1 CS348_01655 IPR006641 YqgF/RNase H-like domain CS348_01655 IPR023323 Tex-like domain superfamily CS348_01655 IPR003029 S1 domain CS348_01655 IPR032639 Tex protein, YqgF-like domain CS348_01655 IPR023319 Tex-like protein, HTH domain superfamily CS348_01660 IPR028624 Transcription elongation factor GreA/GreB CS348_01660 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CS348_01660 IPR023459 Transcription elongation factor GreA/GreB family CS348_01660 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CS348_01660 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CS348_01660 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CS348_01660 IPR006358 Transcription elongation factor GreB CS348_01660 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CS348_01665 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_01665 IPR039420 Transcriptional regulatory protein WalR-like CS348_01665 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_01665 IPR001789 Signal transduction response regulator, receiver domain CS348_01665 IPR011006 CheY-like superfamily CS348_01665 IPR016032 Signal transduction response regulator, C-terminal effector CS348_01670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_01670 IPR003660 HAMP domain CS348_01670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_01670 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_01670 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_01670 IPR003594 Histidine kinase/HSP90-like ATPase CS348_01670 IPR005467 Histidine kinase domain CS348_01675 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CS348_01675 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising CS348_01675 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site CS348_01675 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CS348_01680 IPR025291 Protein of unknown function DUF4153 CS348_01685 IPR000397 Heat shock protein Hsp33 CS348_01685 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily CS348_01685 IPR016153 Heat shock protein Hsp33, N-terminal CS348_01685 IPR016154 Heat shock protein Hsp33, C-terminal CS348_01690 IPR025708 Heat shock protein 15 CS348_01690 IPR002942 RNA-binding S4 domain CS348_01690 IPR036986 RNA-binding S4 domain superfamily CS348_01695 IPR023214 HAD superfamily CS348_01695 IPR041492 Haloacid dehalogenase-like hydrolase CS348_01695 IPR006439 HAD hydrolase, subfamily IA CS348_01695 IPR036412 HAD-like superfamily CS348_01700 IPR010771 Intracellular growth attenuator IgaA CS348_01705 IPR015797 NUDIX hydrolase-like domain superfamily CS348_01705 IPR000086 NUDIX hydrolase domain CS348_01705 IPR020084 NUDIX hydrolase, conserved site CS348_01710 IPR001460 Penicillin-binding protein, transpeptidase CS348_01710 IPR031376 Penicillin-binding protein, OB-like domain CS348_01710 IPR023346 Lysozyme-like domain superfamily CS348_01710 IPR001264 Glycosyl transferase, family 51 CS348_01710 IPR012338 Beta-lactamase/transpeptidase-like CS348_01710 IPR036950 Penicillin binding protein transglycosylase domain CS348_01720 IPR007813 Fimbrial assembly PilN CS348_01730 IPR019684 HofP protein CS348_01735 IPR001775 GspD/PilQ family CS348_01735 IPR013355 Type IV pilus secretin PilQ CS348_01735 IPR011662 Secretin/TonB, short N-terminal domain CS348_01735 IPR038591 NolW-like superfamily CS348_01735 IPR004845 Type II secretion system GspD, conserved site CS348_01735 IPR004846 Type II/III secretion system CS348_01735 IPR005644 NolW-like CS348_01750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01750 IPR031322 Shikimate kinase/gluconokinase CS348_01750 IPR000623 Shikimate kinase/Threonine synthase-like 1 CS348_01750 IPR023000 Shikimate kinase, conserved site CS348_01755 IPR030960 3-dehydroquinate synthase domain CS348_01755 IPR030963 3-dehydroquinate synthase family CS348_01755 IPR016037 3-dehydroquinate synthase AroB CS348_01760 IPR007730 Sporulation-like domain CS348_01760 IPR036680 Sporulation-like domain superfamily CS348_01760 IPR032899 Cell division protein DamX CS348_01765 IPR023095 Adenine-specific methyltransferase, domain 2 CS348_01765 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_01765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_01765 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CS348_01765 IPR012263 Adenine modification methylase, M.EcoRV-type CS348_01770 IPR011060 Ribulose-phosphate binding barrel CS348_01770 IPR000056 Ribulose-phosphate 3-epimerase-like CS348_01770 IPR026019 Ribulose-phosphate 3-epimerase CS348_01770 IPR013785 Aldolase-type TIM barrel CS348_01775 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CS348_01775 IPR037512 Phosphoglycolate phosphatase, prokaryotic CS348_01775 IPR023214 HAD superfamily CS348_01775 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CS348_01775 IPR041492 Haloacid dehalogenase-like hydrolase CS348_01775 IPR006439 HAD hydrolase, subfamily IA CS348_01775 IPR036412 HAD-like superfamily CS348_01780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_01780 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CS348_01780 IPR002305 Aminoacyl-tRNA synthetase, class Ic CS348_01780 IPR002306 Tryptophan-tRNA ligase CS348_01780 IPR024109 Tryptophan-tRNA ligase, bacterial-type CS348_01785 IPR025318 Protein of unknown function DUF4223 CS348_01790 IPR036709 Autotransporter beta-domain superfamily CS348_01790 IPR005546 Autotransporter beta-domain CS348_01795 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CS348_01795 IPR014777 Tetrapyrrole methylase, subdomain 1 CS348_01795 IPR035996 Tetrapyrrole methylase superfamily CS348_01795 IPR006366 Uroporphyrin-III C-methyltransferase CS348_01795 IPR036291 NAD(P)-binding domain superfamily CS348_01795 IPR037115 Sirohaem synthase, dimerisation domain superfamily CS348_01795 IPR000878 Tetrapyrrole methylase CS348_01795 IPR012409 Sirohaem synthase CS348_01795 IPR028281 Siroheme synthase, central domain CS348_01795 IPR019478 Sirohaem synthase, dimerisation domain CS348_01795 IPR006367 Sirohaem synthase, N-terminal CS348_01795 IPR014776 Tetrapyrrole methylase, subdomain 2 CS348_01800 IPR023271 Aquaporin-like CS348_01800 IPR024002 Formate/nitrite transporter, conserved site CS348_01800 IPR000292 Formate/nitrite transporter CS348_01805 IPR017881 Nitrite reductase (NADH) small subunit CS348_01805 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CS348_01805 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type CS348_01810 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CS348_01810 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_01810 IPR023753 FAD/NAD(P)-binding domain CS348_01810 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CS348_01810 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CS348_01810 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CS348_01810 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CS348_01810 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CS348_01810 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CS348_01810 IPR017121 Nitrite reductase [NAD(P)H], large subunit CS348_01810 IPR007419 BFD-like [2Fe-2S]-binding domain CS348_01815 IPR011701 Major facilitator superfamily CS348_01815 IPR020846 Major facilitator superfamily domain CS348_01815 IPR036259 MFS transporter superfamily CS348_01815 IPR023528 Major facilitator superfamily transporter, TsgA CS348_01820 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CS348_01820 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CS348_01820 IPR029000 Cyclophilin-like domain superfamily CS348_01825 IPR022541 Protein of unknown function DUF2559 CS348_01830 IPR036597 Fido-like domain superfamily CS348_01830 IPR003812 Fido domain CS348_01835 IPR029062 Class I glutamine amidotransferase-like CS348_01835 IPR017926 Glutamine amidotransferase CS348_01835 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CS348_01840 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria CS348_01840 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_01840 IPR005814 Aminotransferase class-III CS348_01840 IPR004636 Acetylornithine/Succinylornithine transaminase family CS348_01840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_01840 IPR015424 Pyridoxal phosphate-dependent transferase CS348_01845 IPR010020 Integral membrane protein, YccS/YhfK CS348_01845 IPR032692 Integral membrane protein YccS, N-terminal CS348_01850 IPR018490 Cyclic nucleotide-binding-like CS348_01850 IPR000595 Cyclic nucleotide-binding domain CS348_01850 IPR012318 Crp-type HTH domain CS348_01850 IPR014710 RmlC-like jelly roll fold CS348_01850 IPR018335 Transcription regulator HTH, Crp-type, conserved site CS348_01850 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_01850 IPR036390 Winged helix DNA-binding domain superfamily CS348_01850 IPR018488 Cyclic nucleotide-binding, conserved site CS348_01855 IPR015946 K homology domain-like, alpha/beta CS348_01855 IPR003718 OsmC/Ohr family CS348_01855 IPR036102 OsmC/Ohr superfamily CS348_01860 IPR006083 Phosphoribulokinase/uridine kinase CS348_01860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01860 IPR006082 Phosphoribulokinase CS348_01865 IPR036685 YehU-like superfamily CS348_01865 IPR010648 Uncharacterised protein family UPF0270 CS348_01870 IPR029058 Alpha/Beta hydrolase fold CS348_01870 IPR000073 Alpha/beta hydrolase fold-1 CS348_01870 IPR000952 AB hydrolase 4, conserved site CS348_01870 IPR012020 AB hydrolase 4 family CS348_01875 IPR011008 Dimeric alpha-beta barrel CS348_01875 IPR014910 Putative monooxygenase YdhR CS348_01880 IPR036390 Winged helix DNA-binding domain superfamily CS348_01880 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_01880 IPR000847 Transcription regulator HTH, LysR CS348_01880 IPR037400 Malonate utilization transcriptional regulator, PBP2 domain CS348_01880 IPR005119 LysR, substrate-binding CS348_01885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01885 IPR017871 ABC transporter, conserved site CS348_01885 IPR003439 ABC transporter-like CS348_01885 IPR032781 ABC-transporter extension domain CS348_01885 IPR003593 AAA+ ATPase domain CS348_01890 IPR003680 Flavodoxin-like fold CS348_01890 IPR029039 Flavoprotein-like superfamily CS348_01890 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG CS348_01895 IPR020884 Glutathione-regulated potassium-efflux system protein KefB CS348_01895 IPR006153 Cation/H+ exchanger CS348_01895 IPR003148 Regulator of K+ conductance, N-terminal CS348_01895 IPR036291 NAD(P)-binding domain superfamily CS348_01895 IPR038770 Sodium/solute symporter superfamily CS348_01895 IPR006036 Potassium uptake protein TrkA CS348_01895 IPR004771 K+/H+ exchanger CS348_01900 IPR012658 Conserved hypothetical protein CHP02443 CS348_01905 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CS348_01910 IPR007236 SlyX CS348_01915 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CS348_01915 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CS348_01915 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CS348_01925 IPR002686 Transposase IS200-like CS348_01925 IPR036515 Transposase IS200-like superfamily CS348_01935 IPR013559 YheO-like CS348_01935 IPR039445 Transcriptional regulator DauR-like, HTH domain CS348_01935 IPR039446 Transcriptional regulator DauR-like CS348_01940 IPR027396 DsrEFH-like CS348_01940 IPR017463 Sulphur relay, TusD/DsrE CS348_01940 IPR003787 Sulphur relay, DsrE/F-like protein CS348_01945 IPR037450 Sulphur relay, TusC CS348_01945 IPR003787 Sulphur relay, DsrE/F-like protein CS348_01945 IPR027396 DsrEFH-like CS348_01945 IPR017462 Sulphur relay, TusC/DsrF CS348_01950 IPR027396 DsrEFH-like CS348_01950 IPR023526 Sulphur relay, TusB CS348_01950 IPR007215 Sulphur relay, TusB/DsrH CS348_01955 IPR006032 Ribosomal protein S12/S23 CS348_01955 IPR012340 Nucleic acid-binding, OB-fold CS348_01955 IPR005679 Ribosomal protein S12, bacterial-type CS348_01960 IPR023798 Ribosomal protein S7 domain CS348_01960 IPR020606 Ribosomal protein S7, conserved site CS348_01960 IPR005717 Ribosomal protein S7, bacterial/organellar-type CS348_01960 IPR000235 Ribosomal protein S5/S7 CS348_01960 IPR036823 Ribosomal protein S7 domain superfamily CS348_01965 IPR000640 Elongation factor EFG, domain V-like CS348_01965 IPR041095 Elongation Factor G, domain II CS348_01965 IPR009022 Elongation factor G, domain III CS348_01965 IPR035647 EF-G domain III/V-like CS348_01965 IPR031157 Tr-type G domain, conserved site CS348_01965 IPR004161 Translation elongation factor EFTu-like, domain 2 CS348_01965 IPR035649 EFG, domain V CS348_01965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01965 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_01965 IPR009000 Translation protein, beta-barrel domain superfamily CS348_01965 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_01965 IPR005225 Small GTP-binding protein domain CS348_01965 IPR000795 Transcription factor, GTP-binding domain CS348_01965 IPR005517 Translation elongation factor EFG/EF2, domain IV CS348_01965 IPR004540 Translation elongation factor EFG/EF2 CS348_01970 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CS348_01970 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CS348_01970 IPR004161 Translation elongation factor EFTu-like, domain 2 CS348_01970 IPR033720 Elongation factor Tu, domain 2 CS348_01970 IPR031157 Tr-type G domain, conserved site CS348_01970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_01970 IPR005225 Small GTP-binding protein domain CS348_01970 IPR000795 Transcription factor, GTP-binding domain CS348_01970 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CS348_01970 IPR009000 Translation protein, beta-barrel domain superfamily CS348_01970 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CS348_01985 IPR007419 BFD-like [2Fe-2S]-binding domain CS348_01985 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CS348_01990 IPR008331 Ferritin/DPS protein domain CS348_01990 IPR009078 Ferritin-like superfamily CS348_01990 IPR009040 Ferritin-like diiron domain CS348_01990 IPR012347 Ferritin-like CS348_01990 IPR002024 Bacterioferritin CS348_01995 IPR000045 Prepilin type IV endopeptidase, peptidase domain CS348_01995 IPR014032 Peptidase A24A, prepilin type IV, bacterial CS348_02005 IPR036838 Ribosomal protein S10 domain superfamily CS348_02005 IPR027486 Ribosomal protein S10 domain CS348_02005 IPR018268 Ribosomal protein S10, conserved site CS348_02005 IPR001848 Ribosomal protein S10 CS348_02010 IPR019927 Ribosomal protein L3, bacterial/organelle-type CS348_02010 IPR019926 Ribosomal protein L3, conserved site CS348_02010 IPR000597 Ribosomal protein L3 CS348_02010 IPR009000 Translation protein, beta-barrel domain superfamily CS348_02015 IPR013005 50S ribosomal protein uL4 CS348_02015 IPR023574 Ribosomal protein L4 domain superfamily CS348_02015 IPR002136 Ribosomal protein L4/L1e CS348_02020 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CS348_02020 IPR012678 Ribosomal protein L23/L15e core domain superfamily CS348_02020 IPR001014 Ribosomal protein L23/L25, conserved site CS348_02020 IPR013025 Ribosomal protein L25/L23 CS348_02025 IPR008991 Translation protein SH3-like domain superfamily CS348_02025 IPR012340 Nucleic acid-binding, OB-fold CS348_02025 IPR022666 Ribosomal Proteins L2, RNA binding domain CS348_02025 IPR022671 Ribosomal protein L2, conserved site CS348_02025 IPR014722 Ribosomal protein L2, domain 2 CS348_02025 IPR014726 Ribosomal protein L2, domain 3 CS348_02025 IPR022669 Ribosomal protein L2, C-terminal CS348_02025 IPR005880 Ribosomal protein L2, bacterial/organellar-type CS348_02025 IPR002171 Ribosomal protein L2 CS348_02030 IPR002222 Ribosomal protein S19/S15 CS348_02030 IPR020934 Ribosomal protein S19 conserved site CS348_02030 IPR023575 Ribosomal protein S19, superfamily CS348_02030 IPR005732 Ribosomal protein S19, bacterial-type CS348_02035 IPR036394 Ribosomal protein L22/L17 superfamily CS348_02035 IPR018260 Ribosomal protein L22/L17, conserved site CS348_02035 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CS348_02035 IPR001063 Ribosomal protein L22/L17 CS348_02040 IPR015946 K homology domain-like, alpha/beta CS348_02040 IPR004044 K Homology domain, type 2 CS348_02040 IPR009019 K homology domain superfamily, prokaryotic type CS348_02040 IPR005704 Ribosomal protein S3, bacterial-type CS348_02040 IPR001351 Ribosomal protein S3, C-terminal CS348_02040 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CS348_02040 IPR018280 Ribosomal protein S3, conserved site CS348_02040 IPR004087 K Homology domain CS348_02045 IPR020798 Ribosomal protein L16, conserved site CS348_02045 IPR000114 Ribosomal protein L16 CS348_02045 IPR016180 Ribosomal protein L10e/L16 CS348_02045 IPR036920 Ribosomal protein L10e/L16 superfamily CS348_02050 IPR018254 Ribosomal protein L29, conserved site CS348_02050 IPR001854 Ribosomal protein L29/L35 CS348_02050 IPR036049 Ribosomal protein L29/L35 superfamily CS348_02055 IPR012340 Nucleic acid-binding, OB-fold CS348_02055 IPR000266 Ribosomal protein S17/S11 CS348_02055 IPR019979 Ribosomal protein S17, conserved site CS348_02055 IPR019984 30S ribosomal protein S17 CS348_02060 IPR036853 Ribosomal protein L14 superfamily CS348_02060 IPR000218 Ribosomal protein L14P CS348_02060 IPR005745 Ribosomal protein L14P, bacterial-type CS348_02060 IPR019972 Ribosomal protein L14P, conserved site CS348_02065 IPR008991 Translation protein SH3-like domain superfamily CS348_02065 IPR005825 Ribosomal protein L24/L26, conserved site CS348_02065 IPR014722 Ribosomal protein L2, domain 2 CS348_02065 IPR003256 Ribosomal protein L24 CS348_02065 IPR005824 KOW CS348_02065 IPR041988 Ribosomal Protein L26/L24, KOW domain CS348_02070 IPR022803 Ribosomal protein L5 domain superfamily CS348_02070 IPR020929 Ribosomal protein L5, conserved site CS348_02070 IPR031310 Ribosomal protein L5, N-terminal CS348_02070 IPR031309 Ribosomal protein L5, C-terminal CS348_02070 IPR020930 Ribosomal protein L5, bacterial-type CS348_02070 IPR002132 Ribosomal protein L5 CS348_02075 IPR018271 Ribosomal protein S14, conserved site CS348_02075 IPR001209 Ribosomal protein S14 CS348_02075 IPR023036 Ribosomal protein S14, bacterial/plastid CS348_02080 IPR035987 Ribosomal protein S8 superfamily CS348_02080 IPR000630 Ribosomal protein S8 CS348_02085 IPR000702 Ribosomal protein L6 CS348_02085 IPR020040 Ribosomal protein L6, alpha-beta domain CS348_02085 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CS348_02085 IPR002358 Ribosomal protein L6, conserved site CS348_02085 IPR019906 Ribosomal protein L6, bacterial-type CS348_02090 IPR005484 Ribosomal protein L18 CS348_02090 IPR004389 Ribosomal protein L18, bacterial-type CS348_02095 IPR018192 Ribosomal protein S5, N-terminal, conserved site CS348_02095 IPR013810 Ribosomal protein S5, N-terminal CS348_02095 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_02095 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_02095 IPR005324 Ribosomal protein S5, C-terminal CS348_02095 IPR005712 Ribosomal protein S5, bacterial-type CS348_02095 IPR000851 Ribosomal protein S5 CS348_02100 IPR005996 Ribosomal protein L30, bacterial-type CS348_02100 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CS348_02100 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CS348_02100 IPR018038 Ribosomal protein L30, conserved site CS348_02105 IPR030878 Ribosomal protein L15 CS348_02105 IPR005749 Ribosomal protein L15, bacterial-type CS348_02105 IPR001196 Ribosomal protein L15, conserved site CS348_02105 IPR021131 Ribosomal protein L18e/L15P CS348_02105 IPR036227 Ribosomal L18e/L15P superfamily CS348_02110 IPR026593 Protein translocase subunit SecY CS348_02110 IPR002208 SecY/SEC61-alpha family CS348_02110 IPR030659 SecY conserved site CS348_02110 IPR023201 SecY domain superfamily CS348_02115 IPR000473 Ribosomal protein L36 CS348_02115 IPR035977 Ribosomal protein L36 superfamily CS348_02120 IPR018269 Ribosomal protein S13, conserved site CS348_02120 IPR027437 30s ribosomal protein S13, C-terminal CS348_02120 IPR019980 Ribosomal protein S13, bacterial-type CS348_02120 IPR001892 Ribosomal protein S13 CS348_02120 IPR010979 Ribosomal protein S13-like, H2TH CS348_02125 IPR001971 Ribosomal protein S11 CS348_02125 IPR036967 Ribosomal protein S11 superfamily CS348_02125 IPR018102 Ribosomal S11, conserved site CS348_02125 IPR019981 Ribosomal protein S11, bacterial-type CS348_02130 IPR001912 Ribosomal protein S4/S9, N-terminal CS348_02130 IPR002942 RNA-binding S4 domain CS348_02130 IPR036986 RNA-binding S4 domain superfamily CS348_02130 IPR022801 Ribosomal protein S4/S9 CS348_02130 IPR005709 Ribosomal protein S4, bacterial-type CS348_02130 IPR018079 Ribosomal protein S4, conserved site CS348_02135 IPR011260 RNA polymerase, alpha subunit, C-terminal CS348_02135 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CS348_02135 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CS348_02135 IPR011773 DNA-directed RNA polymerase, alpha subunit CS348_02135 IPR011262 DNA-directed RNA polymerase, insert domain CS348_02135 IPR036603 RNA polymerase, RBP11-like subunit CS348_02140 IPR000456 Ribosomal protein L17 CS348_02140 IPR036373 Ribosomal protein L17 superfamily CS348_02145 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CS348_02150 IPR009061 Putative DNA-binding domain superfamily CS348_02150 IPR000551 MerR-type HTH domain CS348_02150 IPR011788 Zn(II)-responsive transcriptional regulator CS348_02155 IPR005589 Alternative ribosome-rescue factor A CS348_02160 IPR036019 Gated mechanosensitive channel CS348_02160 IPR019823 Large-conductance mechanosensitive channel, conserved site CS348_02160 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CS348_02160 IPR001185 Large-conductance mechanosensitive channel CS348_02165 IPR003148 Regulator of K+ conductance, N-terminal CS348_02165 IPR006036 Potassium uptake protein TrkA CS348_02165 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CS348_02165 IPR006037 Regulator of K+ conductance, C-terminal CS348_02165 IPR036291 NAD(P)-binding domain superfamily CS348_02170 IPR035926 NusB-like superfamily CS348_02170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_02170 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae CS348_02170 IPR004573 rRNA small subunit methyltransferase B CS348_02170 IPR023267 RNA (C5-cytosine) methyltransferase CS348_02170 IPR006027 NusB/RsmB/TIM44 CS348_02170 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CS348_02170 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CS348_02175 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CS348_02175 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CS348_02175 IPR011034 Formyl transferase-like, C-terminal domain superfamily CS348_02175 IPR002376 Formyl transferase, N-terminal CS348_02175 IPR037022 Formyl transferase, C-terminal domain superfamily CS348_02175 IPR005794 Methionyl-tRNA formyltransferase CS348_02175 IPR005793 Formyl transferase, C-terminal CS348_02175 IPR036477 Formyl transferase, N-terminal domain superfamily CS348_02180 IPR023635 Peptide deformylase CS348_02180 IPR036821 Peptide deformylase superfamily CS348_02185 IPR003488 DNA recombination-mediator protein A CS348_02185 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_02185 IPR041614 DprA, winged helix domain CS348_02190 IPR007456 Smg CS348_02195 IPR013498 DNA topoisomerase, type IA, zn finger CS348_02195 IPR000380 DNA topoisomerase, type IA CS348_02200 IPR006070 YrdC-like domain CS348_02200 IPR023535 Threonylcarbamoyl-AMP synthase CS348_02200 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CS348_02205 IPR036291 NAD(P)-binding domain superfamily CS348_02205 IPR022893 Shikimate dehydrogenase family CS348_02205 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CS348_02205 IPR041121 SDH, C-terminal CS348_02205 IPR011342 Shikimate dehydrogenase CS348_02205 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CS348_02210 IPR009962 Protein of unknown function DUF1488 CS348_02210 IPR036692 Shew3726-like superfamily CS348_02215 IPR001451 Hexapeptide repeat CS348_02215 IPR011004 Trimeric LpxA-like superfamily CS348_02255 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CS348_02255 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CS348_02255 IPR001036 Acriflavin resistance protein CS348_02260 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CS348_02260 IPR006143 RND efflux pump, membrane fusion protein CS348_02265 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CS348_02265 IPR009057 Homeobox-like domain superfamily CS348_02265 IPR013572 Transcription regulator MAATS, C-terminal CS348_02265 IPR001647 DNA-binding HTH domain, TetR-type CS348_02265 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_02270 IPR001633 EAL domain CS348_02270 IPR035919 EAL domain superfamily CS348_02270 IPR029787 Nucleotide cyclase CS348_02270 IPR005330 MHYT domain CS348_02270 IPR000160 GGDEF domain CS348_02275 IPR022540 Protein of unknown function DUF2556 CS348_02280 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_02280 IPR002941 DNA methylase N-4/N-6 CS348_02280 IPR001091 Restriction/modification DNA-methylase CS348_02280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_02285 IPR009057 Homeobox-like domain superfamily CS348_02285 IPR005412 DNA-binding protein Fis CS348_02285 IPR002197 DNA binding HTH domain, Fis-type CS348_02290 IPR013785 Aldolase-type TIM barrel CS348_02290 IPR018517 tRNA-dihydrouridine synthase, conserved site CS348_02290 IPR032887 tRNA-dihydrouridine synthase B CS348_02290 IPR001269 tRNA-dihydrouridine synthase CS348_02290 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CS348_02290 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CS348_02290 IPR035587 DUS-like, FMN-binding domain CS348_02300 IPR004498 Ribosomal protein L11 methyltransferase CS348_02300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_02305 IPR011849 Sodium/pantothenate symporter CS348_02305 IPR038377 Sodium/glucose symporter superfamily CS348_02305 IPR001734 Sodium/solute symporter CS348_02305 IPR018212 Sodium/solute symporter, conserved site CS348_02310 IPR010398 Protein of unknown function DUF997 CS348_02315 IPR016185 Pre-ATP-grasp domain superfamily CS348_02315 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CS348_02315 IPR005482 Biotin carboxylase, C-terminal CS348_02315 IPR011764 Biotin carboxylation domain CS348_02315 IPR005481 Biotin carboxylase-like, N-terminal domain CS348_02315 IPR013815 ATP-grasp fold, subdomain 1 CS348_02315 IPR011761 ATP-grasp fold CS348_02315 IPR011054 Rudiment single hybrid motif CS348_02315 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CS348_02320 IPR001882 Biotin-binding site CS348_02320 IPR001249 Acetyl-CoA biotin carboxyl carrier CS348_02320 IPR011053 Single hybrid motif CS348_02320 IPR000089 Biotin/lipoyl attachment CS348_02325 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ CS348_02325 IPR013130 Ferric reductase transmembrane component-like domain CS348_02330 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_02330 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily CS348_02330 IPR000572 Oxidoreductase, molybdopterin-binding domain CS348_02330 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP CS348_02335 IPR014188 Acrylyl-CoA reductase AcuI CS348_02335 IPR013149 Alcohol dehydrogenase, C-terminal CS348_02335 IPR013154 Alcohol dehydrogenase, N-terminal CS348_02335 IPR036291 NAD(P)-binding domain superfamily CS348_02335 IPR020843 Polyketide synthase, enoylreductase domain CS348_02335 IPR011032 GroES-like superfamily CS348_02340 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 CS348_02340 IPR035919 EAL domain superfamily CS348_02340 IPR001633 EAL domain CS348_02340 IPR000160 GGDEF domain CS348_02340 IPR029787 Nucleotide cyclase CS348_02355 IPR004753 Cell shape determining protein MreB CS348_02360 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 CS348_02360 IPR007221 Rod shape-determining protein MreC CS348_02360 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 CS348_02365 IPR026034 Cell shape-determining protein MreD, proteobacterial type CS348_02365 IPR007227 Cell shape-determining protein MreD CS348_02370 IPR029001 Inosine triphosphate pyrophosphatase-like CS348_02370 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CS348_02375 IPR012340 Nucleic acid-binding, OB-fold CS348_02375 IPR003029 S1 domain CS348_02375 IPR022967 RNA-binding domain, S1 CS348_02375 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CS348_02375 IPR004659 Ribonuclease E/G CS348_02380 IPR025263 Domain of unknown function DUF3971 CS348_02380 IPR011836 Conserved hypothetical protein CHP02099 CS348_02380 IPR032712 AsmA-like, C-terminal CS348_02385 IPR025502 TldD CS348_02385 IPR036059 Metalloprotease TldD/PmbA superfamily CS348_02385 IPR035068 Metalloprotease TldD/PmbA, N-terminal CS348_02385 IPR002510 Metalloprotease TldD/PmbA CS348_02390 IPR036390 Winged helix DNA-binding domain superfamily CS348_02390 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_02390 IPR000847 Transcription regulator HTH, LysR CS348_02390 IPR005119 LysR, substrate-binding CS348_02395 IPR012451 Protein of unknown function DUF1656 CS348_02400 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CS348_02400 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA CS348_02400 IPR006143 RND efflux pump, membrane fusion protein CS348_02405 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CS348_02405 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB CS348_02410 IPR035905 Barstar-like superfamily CS348_02410 IPR000468 Barstar (barnase inhibitor) CS348_02415 IPR025543 Dodecin-like CS348_02415 IPR010854 Domain of unknown function DUF1471 CS348_02415 IPR036275 YdgH-like superfamily CS348_02420 IPR025543 Dodecin-like CS348_02420 IPR010854 Domain of unknown function DUF1471 CS348_02420 IPR036275 YdgH-like superfamily CS348_02425 IPR020900 Arginine repressor, DNA-binding domain CS348_02425 IPR001669 Arginine repressor CS348_02425 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_02425 IPR036390 Winged helix DNA-binding domain superfamily CS348_02425 IPR020899 Arginine repressor, C-terminal CS348_02425 IPR036251 Arginine repressor, C-terminal domain superfamily CS348_02430 IPR023958 Malate dehydrogenase, type 1, bacterial CS348_02430 IPR010097 Malate dehydrogenase, type 1 CS348_02430 IPR001252 Malate dehydrogenase, active site CS348_02430 IPR036291 NAD(P)-binding domain superfamily CS348_02430 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CS348_02430 IPR001557 L-lactate/malate dehydrogenase CS348_02430 IPR022383 Lactate/malate dehydrogenase, C-terminal CS348_02430 IPR001236 Lactate/malate dehydrogenase, N-terminal CS348_02445 IPR001898 Solute carrier family 13 CS348_02445 IPR031312 Sodium/sulphate symporter, conserved site CS348_02450 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CS348_02455 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily CS348_02455 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CS348_02460 IPR023424 Oxaloacetate decarboxylase gamma chain, probable CS348_02460 IPR005899 Sodium ion-translocating decarboxylase CS348_02465 IPR000891 Pyruvate carboxyltransferase CS348_02465 IPR005776 Oxaloacetate decarboxylase, alpha subunit CS348_02465 IPR000089 Biotin/lipoyl attachment CS348_02465 IPR011053 Single hybrid motif CS348_02465 IPR003379 Carboxylase, conserved domain CS348_02465 IPR001882 Biotin-binding site CS348_02465 IPR013785 Aldolase-type TIM barrel CS348_02470 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit CS348_02475 IPR002736 Triphosphoribosyl-dephospho-CoA protein CS348_02475 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG CS348_02480 IPR011783 Peptidase S1C, DegS CS348_02480 IPR036034 PDZ superfamily CS348_02480 IPR001940 Peptidase S1C CS348_02480 IPR009003 Peptidase S1, PA clan CS348_02480 IPR001478 PDZ domain CS348_02485 IPR001478 PDZ domain CS348_02485 IPR036034 PDZ superfamily CS348_02485 IPR011782 Peptidase S1C, Do CS348_02485 IPR009003 Peptidase S1, PA clan CS348_02485 IPR001940 Peptidase S1C CS348_02490 IPR009386 Protein of unknown function DUF1043 CS348_02495 IPR030870 Cell division protein ZapE CS348_02495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_02495 IPR005654 ATPase, AFG1-like CS348_02500 IPR023563 Ribosomal protein L13, conserved site CS348_02500 IPR005823 Ribosomal protein L13, bacterial-type CS348_02500 IPR005822 Ribosomal protein L13 CS348_02500 IPR036899 Ribosomal protein L13 superfamily CS348_02505 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_02505 IPR000754 Ribosomal protein S9 CS348_02505 IPR023035 Ribosomal protein S9, bacterial/plastid CS348_02505 IPR020574 Ribosomal protein S9, conserved site CS348_02505 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_02515 IPR004045 Glutathione S-transferase, N-terminal CS348_02515 IPR040079 Glutathione Transferase family CS348_02515 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CS348_02515 IPR010987 Glutathione S-transferase, C-terminal-like CS348_02515 IPR034341 Stringent starvation protein A, N-terminal CS348_02515 IPR036249 Thioredoxin-like superfamily CS348_02515 IPR004046 Glutathione S-transferase, C-terminal CS348_02520 IPR007481 Stringent starvation protein B CS348_02520 IPR036760 SspB-like superfamily CS348_02525 IPR036390 Winged helix DNA-binding domain superfamily CS348_02525 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_02525 IPR023730 HTH-type transcriptional repressor NanR CS348_02525 IPR000524 Transcription regulator HTH, GntR CS348_02525 IPR008920 Transcription regulator FadR/GntR, C-terminal CS348_02525 IPR011711 GntR, C-terminal CS348_02530 IPR020624 Schiff base-forming aldolase, conserved site CS348_02530 IPR002220 DapA-like CS348_02530 IPR020625 Schiff base-forming aldolase, active site CS348_02530 IPR013785 Aldolase-type TIM barrel CS348_02530 IPR005264 N-acetylneuraminate lyase CS348_02535 IPR011701 Major facilitator superfamily CS348_02535 IPR020846 Major facilitator superfamily domain CS348_02535 IPR004742 Sialic acid transporter CS348_02535 IPR036259 MFS transporter superfamily CS348_02540 IPR013785 Aldolase-type TIM barrel CS348_02540 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase CS348_02540 IPR011060 Ribulose-phosphate binding barrel CS348_02545 IPR000600 ROK family CS348_02545 IPR023945 N-acetylmannosamine kinase, bacterial CS348_02550 IPR004375 YhcH/YjgK/YiaL family CS348_02550 IPR037012 YhcH/YjgK/YiaL superfamily CS348_02555 IPR013108 Amidohydrolase 3 CS348_02555 IPR011059 Metal-dependent hydrolase, composite domain superfamily CS348_02555 IPR032466 Metal-dependent hydrolase CS348_02560 IPR001248 Purine-cytosine permease CS348_02560 IPR030191 Cytosine permease CS348_02560 IPR038271 Purine-cytosine permease superfamily CS348_02565 IPR009362 YhcG PDDEXK nuclease domain CS348_02565 IPR041527 YhcG, N-terminal CS348_02570 IPR028261 Dihydroprymidine dehydrogenase domain II CS348_02570 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_02570 IPR023753 FAD/NAD(P)-binding domain CS348_02570 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 CS348_02570 IPR009051 Alpha-helical ferredoxin CS348_02570 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_02575 IPR017932 Glutamine amidotransferase type 2 domain CS348_02575 IPR002489 Glutamate synthase, alpha subunit, C-terminal CS348_02575 IPR029055 Nucleophile aminohydrolases, N-terminal CS348_02575 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily CS348_02575 IPR006982 Glutamate synthase, central-N CS348_02575 IPR013785 Aldolase-type TIM barrel CS348_02575 IPR002932 Glutamate synthase domain CS348_02585 IPR039661 ELP3/YhcC CS348_02585 IPR032432 Radical SAM, C-terminal extension CS348_02585 IPR006638 Elp3/MiaB/NifB CS348_02585 IPR007197 Radical SAM CS348_02585 IPR005911 Protein YhcC-like CS348_02585 IPR023404 Radical SAM, alpha/beta horseshoe CS348_02590 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB CS348_02590 IPR036641 HPT domain superfamily CS348_02590 IPR000700 PAS-associated, C-terminal CS348_02590 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CS348_02590 IPR011006 CheY-like superfamily CS348_02590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_02590 IPR040642 Histidine kinase receptor ArcB, transmembrane domain CS348_02590 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_02590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_02590 IPR001789 Signal transduction response regulator, receiver domain CS348_02590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_02590 IPR003594 Histidine kinase/HSP90-like ATPase CS348_02590 IPR035965 PAS domain superfamily CS348_02590 IPR000014 PAS domain CS348_02590 IPR013767 PAS fold CS348_02590 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily CS348_02590 IPR005467 Histidine kinase domain CS348_02595 IPR026041 Glyoxalase ElbB CS348_02595 IPR029062 Class I glutamine amidotransferase-like CS348_02600 IPR036950 Penicillin binding protein transglycosylase domain CS348_02600 IPR023346 Lysozyme-like domain superfamily CS348_02600 IPR011812 Biosynthetic peptidoglycan transglycosylase CS348_02600 IPR001264 Glycosyl transferase, family 51 CS348_02605 IPR011009 Protein kinase-like domain superfamily CS348_02605 IPR019647 PhoP regulatory network protein YrbL CS348_02615 IPR000032 Phosphocarrier protein HPr-like CS348_02615 IPR035895 HPr-like superfamily CS348_02615 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CS348_02615 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CS348_02620 IPR005337 RapZ-like family CS348_02620 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_02625 IPR002178 PTS EIIA type-2 domain CS348_02625 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN CS348_02625 IPR016152 Phosphotransferase/anion transporter CS348_02630 IPR003489 Ribosome hibernation promoting factor/RaiA CS348_02630 IPR036567 Ribosome hibernation promotion factor-like CS348_02635 IPR007046 RNA polymerase sigma factor 54, core-binding domain CS348_02635 IPR000394 RNA polymerase sigma factor 54 CS348_02635 IPR007634 RNA polymerase sigma factor 54, DNA-binding CS348_02635 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CS348_02640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_02640 IPR003593 AAA+ ATPase domain CS348_02640 IPR003439 ABC transporter-like CS348_02640 IPR017871 ABC transporter, conserved site CS348_02640 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CS348_02640 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CS348_02645 IPR005653 Organic solvent tolerance-like, N-terminal CS348_02645 IPR014340 Lipopolysaccharide export system protein LptA CS348_02650 IPR010664 Lipopolysaccharide assembly, LptC-related CS348_02650 IPR026265 Lipopolysaccharide export system protein LptC CS348_02655 IPR023214 HAD superfamily CS348_02655 IPR036412 HAD-like superfamily CS348_02655 IPR010023 KdsC family CS348_02660 IPR001347 Sugar isomerase (SIS) CS348_02660 IPR000644 CBS domain CS348_02660 IPR035474 KpsF-like, SIS domain CS348_02660 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CS348_02665 IPR004481 Sodium/potassium/calcium exchanger CS348_02665 IPR004837 Sodium/calcium exchanger membrane region CS348_02670 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CS348_02670 IPR017871 ABC transporter, conserved site CS348_02670 IPR003439 ABC transporter-like CS348_02670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_02670 IPR003593 AAA+ ATPase domain CS348_02675 IPR030802 ABC transporter permease MalE CS348_02675 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CS348_02680 IPR003399 Mce/MlaD CS348_02680 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD CS348_02685 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CS348_02685 IPR042245 Tgt2/MlaC superfamily CS348_02690 IPR036513 STAS domain superfamily CS348_02690 IPR002645 STAS domain CS348_02695 IPR002634 BolA protein CS348_02695 IPR036065 BolA-like superfamily CS348_02700 IPR001986 Enolpyruvate transferase domain CS348_02700 IPR036968 Enolpyruvate transferase domain superfamily CS348_02700 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CS348_02700 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CS348_02705 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_02705 IPR038722 Ner, winged helix-turn-helix DNA-binding domain CS348_02710 IPR033749 Polyprenyl synthetase, conserved site CS348_02710 IPR008949 Isoprenoid synthase domain superfamily CS348_02710 IPR000092 Polyprenyl synthetase CS348_02715 IPR028909 Ribosomal protein L21-like CS348_02715 IPR036164 L21-like superfamily CS348_02715 IPR001787 Ribosomal protein L21 CS348_02715 IPR018258 Ribosomal protein L21, conserved site CS348_02720 IPR018261 Ribosomal protein L27, conserved site CS348_02720 IPR001684 Ribosomal protein L27 CS348_02725 IPR000620 EamA domain CS348_02730 IPR035101 GTP-binding protein, Obg-type CS348_02730 IPR014100 GTP-binding protein Obg/CgtA CS348_02730 IPR006074 GTP1/OBG, conserved site CS348_02730 IPR031167 OBG-type guanine nucleotide-binding (G) domain CS348_02730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_02730 IPR036726 GTP1/OBG domain superfamily CS348_02730 IPR006073 GTP binding domain CS348_02730 IPR006169 GTP1/OBG domain CS348_02735 IPR012338 Beta-lactamase/transpeptidase-like CS348_02735 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C CS348_02740 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CS348_02740 IPR006359 Transcription elongation factor GreA CS348_02740 IPR028624 Transcription elongation factor GreA/GreB CS348_02740 IPR023459 Transcription elongation factor GreA/GreB family CS348_02740 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CS348_02740 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CS348_02740 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CS348_02740 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CS348_02745 IPR001890 RNA-binding, CRM domain CS348_02745 IPR017924 RNA-binding protein YhbY CS348_02745 IPR035920 YhbY-like superfamily CS348_02750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_02750 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria CS348_02750 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CS348_02750 IPR015507 Ribosomal RNA large subunit methyltransferase E CS348_02760 IPR000642 Peptidase M41 CS348_02760 IPR003959 ATPase, AAA-type, core CS348_02760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_02760 IPR041569 AAA ATPase, AAA+ lid domain CS348_02760 IPR011546 Peptidase M41, FtsH extracellular CS348_02760 IPR037219 Peptidase M41-like CS348_02760 IPR003960 ATPase, AAA-type, conserved site CS348_02760 IPR003593 AAA+ ATPase domain CS348_02760 IPR005936 Peptidase, FtsH CS348_02765 IPR000489 Pterin-binding domain CS348_02765 IPR011005 Dihydropteroate synthase-like CS348_02765 IPR006390 Dihydropteroate synthase CS348_02770 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CS348_02770 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CS348_02770 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CS348_02770 IPR006352 Phosphoglucosamine mutase, bacterial type CS348_02770 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CS348_02770 IPR005843 Alpha-D-phosphohexomutase, C-terminal CS348_02770 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CS348_02770 IPR016066 Alpha-D-phosphohexomutase, conserved site CS348_02770 IPR005841 Alpha-D-phosphohexomutase superfamily CS348_02775 IPR004692 Preprotein translocase SecG subunit CS348_02790 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CS348_02790 IPR018223 Argininosuccinate synthase, conserved site CS348_02790 IPR001518 Argininosuccinate synthase CS348_02790 IPR023437 Argininosuccinate synthase, type 2 subfamily CS348_02790 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail CS348_02790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_02800 IPR035956 RimP, N-terminal domain superfamily CS348_02800 IPR003728 Ribosome maturation factor RimP CS348_02800 IPR028998 Ribosome maturation factor RimP, C-terminal CS348_02800 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CS348_02800 IPR028989 Ribosome maturation factor RimP, N-terminal CS348_02805 IPR036555 NusA, N-terminal domain superfamily CS348_02805 IPR022967 RNA-binding domain, S1 CS348_02805 IPR003029 S1 domain CS348_02805 IPR030842 Transcription termination/antitermination protein NusA, bacterial CS348_02805 IPR012340 Nucleic acid-binding, OB-fold CS348_02805 IPR009019 K homology domain superfamily, prokaryotic type CS348_02805 IPR010213 Transcription termination factor NusA CS348_02805 IPR004087 K Homology domain CS348_02805 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CS348_02805 IPR013735 Transcription factor NusA, N-terminal CS348_02805 IPR010214 Transcription termination factor NusA, C-terminal duplication CS348_02805 IPR015946 K homology domain-like, alpha/beta CS348_02805 IPR025249 KH domain, NusA-like CS348_02810 IPR005225 Small GTP-binding protein domain CS348_02810 IPR000795 Transcription factor, GTP-binding domain CS348_02810 IPR000178 Translation initiation factor aIF-2, bacterial-like CS348_02810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_02810 IPR006847 Translation initiation factor IF-2, N-terminal CS348_02810 IPR013575 Initiation factor 2 associated domain, bacterial CS348_02810 IPR009061 Putative DNA-binding domain superfamily CS348_02810 IPR015760 Translation initiation factor IF- 2 CS348_02810 IPR023115 Translation initiation factor IF- 2, domain 3 CS348_02810 IPR009000 Translation protein, beta-barrel domain superfamily CS348_02810 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CS348_02815 IPR023799 Ribosome-binding factor A domain superfamily CS348_02815 IPR020053 Ribosome-binding factor A, conserved site CS348_02815 IPR000238 Ribosome-binding factor A CS348_02815 IPR015946 K homology domain-like, alpha/beta CS348_02820 IPR015947 PUA-like superfamily CS348_02820 IPR002501 Pseudouridine synthase II, N-terminal CS348_02820 IPR014780 tRNA pseudouridine synthase II, TruB CS348_02820 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CS348_02820 IPR032819 tRNA pseudouridylate synthase B, C-terminal CS348_02820 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_02820 IPR036974 PUA domain superfamily CS348_02825 IPR009068 S15/NS1, RNA-binding CS348_02825 IPR000589 Ribosomal protein S15 CS348_02825 IPR005290 Ribosomal protein S15, bacterial-type CS348_02830 IPR003029 S1 domain CS348_02830 IPR022967 RNA-binding domain, S1 CS348_02830 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_02830 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily CS348_02830 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CS348_02830 IPR001247 Exoribonuclease, phosphorolytic domain 1 CS348_02830 IPR015847 Exoribonuclease, phosphorolytic domain 2 CS348_02830 IPR036345 Exoribonuclease, PH domain 2 superfamily CS348_02830 IPR004087 K Homology domain CS348_02830 IPR004088 K Homology domain, type 1 CS348_02830 IPR036612 K Homology domain, type 1 superfamily CS348_02830 IPR012340 Nucleic acid-binding, OB-fold CS348_02830 IPR027408 PNPase/RNase PH domain superfamily CS348_02830 IPR012162 Polyribonucleotide nucleotidyltransferase CS348_02835 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_02835 IPR023605 Lipoprotein NlpI CS348_02835 IPR013026 Tetratricopeptide repeat-containing domain CS348_02835 IPR013105 Tetratricopeptide repeat 2 CS348_02835 IPR019734 Tetratricopeptide repeat CS348_02840 IPR021046 Cold-shock protein, DEAD box A, C-terminal CS348_02840 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CS348_02840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_02840 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CS348_02840 IPR011545 DEAD/DEAH box helicase domain CS348_02840 IPR028618 ATP-dependent RNA helicase DeaD CS348_02840 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_02840 IPR001650 Helicase, C-terminal CS348_02840 IPR014014 RNA helicase, DEAD-box type, Q motif CS348_02840 IPR034415 CsdA, RNA recognition motif CS348_02840 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CS348_02845 IPR018227 Amino acid/polyamine transporter 2 CS348_02845 IPR013061 Tryptophan/tryrosine permease, conserved site CS348_02845 IPR013059 Tryptophan/tyrosine transporter CS348_02850 IPR011251 Luciferase-like domain CS348_02850 IPR019949 Luciferase family oxidoreductase, group 1 CS348_02850 IPR036661 Luciferase-like domain superfamily CS348_02870 IPR016181 Acyl-CoA N-acyltransferase CS348_02870 IPR000182 GNAT domain CS348_02875 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease CS348_02875 IPR035901 GIY-YIG endonuclease superfamily CS348_02875 IPR000305 GIY-YIG endonuclease CS348_02880 IPR012349 FMN-binding split barrel CS348_02880 IPR011194 Uncharacterised protein family UPF0306 CS348_02885 IPR002818 DJ-1/PfpI CS348_02885 IPR029062 Class I glutamine amidotransferase-like CS348_02885 IPR006286 Deglycase PfpI CS348_02890 IPR000534 Semialdehyde dehydrogenase, NAD-binding CS348_02890 IPR036291 NAD(P)-binding domain superfamily CS348_02890 IPR016040 NAD(P)-binding domain CS348_02895 IPR007055 BON domain CS348_02895 IPR014004 Transport-associated and nodulation domain, bacteria CS348_02900 IPR023070 DnaA initiator-associating protein CS348_02900 IPR035461 GmhA/DiaA CS348_02900 IPR001347 Sugar isomerase (SIS) CS348_02905 IPR011856 tRNA endonuclease-like domain superfamily CS348_02905 IPR011335 Restriction endonuclease type II-like CS348_02905 IPR003509 Uncharacterised protein family UPF0102 CS348_02910 IPR007443 Penicillin-binding protein activator LpoA CS348_02910 IPR008939 Lytic transglycosylase, superhelical U-shaped CS348_02910 IPR028082 Periplasmic binding protein-like I CS348_02910 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_02915 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CS348_02915 IPR008189 rRNA small subunit methyltransferase I CS348_02915 IPR014776 Tetrapyrrole methylase, subdomain 2 CS348_02915 IPR014777 Tetrapyrrole methylase, subdomain 1 CS348_02915 IPR035996 Tetrapyrrole methylase superfamily CS348_02915 IPR000878 Tetrapyrrole methylase CS348_02920 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_02920 IPR036390 Winged helix DNA-binding domain superfamily CS348_02920 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_02920 IPR001034 DeoR-type HTH domain CS348_02925 IPR011032 GroES-like superfamily CS348_02925 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CS348_02925 IPR013154 Alcohol dehydrogenase, N-terminal CS348_02925 IPR013149 Alcohol dehydrogenase, C-terminal CS348_02925 IPR020843 Polyketide synthase, enoylreductase domain CS348_02925 IPR036291 NAD(P)-binding domain superfamily CS348_02930 IPR004703 Phosphotransferase system, sugar-specific permease component CS348_02930 IPR013853 Galactitol permease IIC component CS348_02930 IPR013014 Phosphotransferase system, EIIC component, type 2 CS348_02935 IPR036095 PTS system IIB component-like superfamily CS348_02935 IPR013011 Phosphotransferase system, EIIB component, type 2 CS348_02935 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CS348_02940 IPR016152 Phosphotransferase/anion transporter CS348_02940 IPR002178 PTS EIIA type-2 domain CS348_02945 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like CS348_02945 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ CS348_02945 IPR013785 Aldolase-type TIM barrel CS348_02950 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY CS348_02950 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY CS348_02950 IPR000771 Fructose-bisphosphate aldolase, class-II CS348_02950 IPR013785 Aldolase-type TIM barrel CS348_02955 IPR007392 D-galactarate/Altronate dehydratase, C-terminal CS348_02955 IPR013974 SAF domain CS348_02955 IPR017654 Galactarate dehydratase GarD-like CS348_02955 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae CS348_02960 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CS348_02960 IPR017648 5-keto-4-deoxy-D-glucarate aldolase CS348_02960 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_02960 IPR040442 Pyruvate kinase-like domain superfamily CS348_02965 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CS348_02965 IPR036291 NAD(P)-binding domain superfamily CS348_02965 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CS348_02965 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CS348_02965 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_02965 IPR006398 2-hydroxy-3-oxopropionate reductase CS348_02965 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_02965 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CS348_02970 IPR004381 Glycerate kinase CS348_02970 IPR018197 Glycerate kinase, restriction-enzyme-like fold CS348_02970 IPR036129 Glycerate kinase superfamily CS348_02970 IPR018193 Glycerate kinase, flavodoxin-like fold CS348_02995 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_02995 IPR005119 LysR, substrate-binding CS348_02995 IPR000847 Transcription regulator HTH, LysR CS348_02995 IPR036390 Winged helix DNA-binding domain superfamily CS348_03000 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CS348_03000 IPR005789 Threonine dehydratase, catabolic CS348_03000 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CS348_03000 IPR001926 Pyridoxal-phosphate dependent enzyme CS348_03005 IPR023726 Threonine/serine transporter TdcC CS348_03005 IPR018227 Amino acid/polyamine transporter 2 CS348_03005 IPR004694 Hydroxy amino acid transporter CS348_03010 IPR000890 Aliphatic acid kinase, short-chain CS348_03010 IPR023865 Aliphatic acid kinase, short-chain, conserved site CS348_03010 IPR024917 Propionate kinase CS348_03010 IPR004372 Acetate/propionate kinase CS348_03015 IPR005949 Formate acetyltransferase CS348_03015 IPR004184 Pyruvate formate lyase domain CS348_03015 IPR001150 Glycine radical domain CS348_03015 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CS348_03020 IPR029009 Allosteric substrate binding domain superfamily CS348_03020 IPR005131 Serine dehydratase beta chain CS348_03020 IPR005130 Serine dehydratase-like, alpha subunit CS348_03020 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CS348_03030 IPR021144 Uncharacterised protein family UPF0597 CS348_03030 IPR005130 Serine dehydratase-like, alpha subunit CS348_03040 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain CS348_03040 IPR003829 Pirin, N-terminal domain CS348_03040 IPR014710 RmlC-like jelly roll fold CS348_03040 IPR012093 Pirin CS348_03040 IPR011051 RmlC-like cupin domain superfamily CS348_03045 IPR005119 LysR, substrate-binding CS348_03045 IPR000847 Transcription regulator HTH, LysR CS348_03045 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_03045 IPR036390 Winged helix DNA-binding domain superfamily CS348_03050 IPR008523 Protein of unknown function DUF805 CS348_03055 IPR016639 Glutathione S-transferase Omega/GSH CS348_03055 IPR040079 Glutathione Transferase family CS348_03055 IPR036249 Thioredoxin-like superfamily CS348_03055 IPR004045 Glutathione S-transferase, N-terminal CS348_03055 IPR010987 Glutathione S-transferase, C-terminal-like CS348_03055 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CS348_03060 IPR032808 DoxX family CS348_03065 IPR025612 YqjK-like protein CS348_03070 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CS348_03075 IPR010279 Inner membrane protein YqjD/ElaB CS348_03080 IPR009468 Protein of unknown function DUF1090 CS348_03085 IPR026574 Modulator protein MzrA CS348_03085 IPR027398 SecD export protein N-terminal TM domain CS348_03090 IPR032816 SNARE associated Golgi protein CS348_03090 IPR032818 DedA family CS348_03100 IPR036458 Sodium:dicarboxylate symporter superfamily CS348_03100 IPR001991 Sodium:dicarboxylate symporter CS348_03100 IPR023025 Serine/threonine transporter SstT CS348_03105 IPR022369 Integral membrane protein TerC, riboswitch-linked CS348_03105 IPR005496 Integral membrane protein TerC CS348_03110 IPR036291 NAD(P)-binding domain superfamily CS348_03110 IPR000683 Oxidoreductase, N-terminal CS348_03115 IPR003848 Domain of unknown function DUF218 CS348_03120 IPR002725 Protein of unknown function DUF45 CS348_03125 IPR007848 Methyltransferase small domain CS348_03125 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD CS348_03125 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_03125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_03130 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_03130 IPR023753 FAD/NAD(P)-binding domain CS348_03130 IPR013785 Aldolase-type TIM barrel CS348_03130 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CS348_03135 IPR015424 Pyridoxal phosphate-dependent transferase CS348_03135 IPR005814 Aminotransferase class-III CS348_03135 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_03135 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_03135 IPR017747 Putrescine aminotransferase CS348_03145 IPR000014 PAS domain CS348_03145 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CS348_03145 IPR003660 HAMP domain CS348_03145 IPR035965 PAS domain superfamily CS348_03145 IPR013655 PAS fold-3 CS348_03145 IPR004090 Chemotaxis methyl-accepting receptor CS348_03145 IPR001610 PAC motif CS348_03150 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CS348_03150 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CS348_03150 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CS348_03150 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CS348_03150 IPR003660 HAMP domain CS348_03150 IPR004090 Chemotaxis methyl-accepting receptor CS348_03155 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_03155 IPR036390 Winged helix DNA-binding domain superfamily CS348_03155 IPR005149 Transcription regulator PadR, N-terminal CS348_03160 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CS348_03160 IPR007037 Siderophore-interacting protein, C-terminal domain CS348_03160 IPR017927 FAD-binding domain, ferredoxin reductase-type CS348_03160 IPR013113 FAD-binding 9, siderophore-interacting CS348_03160 IPR039374 Siderophore-interacting protein CS348_03160 IPR017938 Riboflavin synthase-like beta-barrel CS348_03170 IPR036895 Uracil-DNA glycosylase-like domain superfamily CS348_03170 IPR015637 G/U mismatch-specific DNA glycosylase CS348_03170 IPR005122 Uracil-DNA glycosylase-like CS348_03170 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial CS348_03175 IPR007624 RNA polymerase sigma-70 region 3 CS348_03175 IPR007630 RNA polymerase sigma-70 region 4 CS348_03175 IPR000943 RNA polymerase sigma-70 CS348_03175 IPR007627 RNA polymerase sigma-70 region 2 CS348_03175 IPR042189 Sigma-70 factor, region 1.1 superfamily CS348_03175 IPR013325 RNA polymerase sigma factor, region 2 CS348_03175 IPR028630 RNA polymerase sigma factor RpoD CS348_03175 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_03175 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CS348_03175 IPR009042 RNA polymerase sigma-70 region 1.2 CS348_03175 IPR007631 RNA polymerase sigma factor 70, non-essential domain CS348_03175 IPR013324 RNA polymerase sigma factor, region 3/4-like CS348_03175 IPR014284 RNA polymerase sigma-70 like domain CS348_03175 IPR007127 RNA polymerase sigma factor 70, region 1.1 CS348_03180 IPR030846 DNA primase DnaG, bacteria CS348_03180 IPR036977 DNA Primase, CHC2-type zinc finger CS348_03180 IPR013173 DNA primase DnaG, DnaB-binding domain CS348_03180 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CS348_03180 IPR013264 DNA primase, catalytic core, N-terminal CS348_03180 IPR019475 DNA primase, DnaB-helicase binding domain CS348_03180 IPR034151 Bacterial DnaG primase, TOPRIM domain CS348_03180 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CS348_03180 IPR002694 Zinc finger, CHC2-type CS348_03180 IPR006171 TOPRIM domain CS348_03180 IPR006295 DNA primase, DnaG CS348_03185 IPR038380 Ribosomal protein S21 superfamily CS348_03185 IPR018278 Ribosomal protein S21, conserved site CS348_03185 IPR001911 Ribosomal protein S21 CS348_03190 IPR000905 Gcp-like domain CS348_03190 IPR017861 Kae1/TsaD family CS348_03190 IPR017860 Peptidase M22, conserved site CS348_03190 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CS348_03195 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CS348_03200 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CS348_03205 IPR006156 Dihydroneopterin aldolase CS348_03205 IPR006157 Dihydroneopterin aldolase/epimerase domain CS348_03210 IPR003824 Undecaprenyl-diphosphatase UppP CS348_03215 IPR003607 HD/PDEase domain CS348_03215 IPR002646 Poly A polymerase, head domain CS348_03215 IPR006674 HD domain CS348_03215 IPR012006 tRNA nucleotidyltransferase, proteobacteria CS348_03215 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CS348_03220 IPR003646 SH3-like domain, bacterial-type CS348_03220 IPR016476 SH3 domain protein CS348_03225 IPR033469 CYTH-like domain superfamily CS348_03225 IPR007899 CHAD domain CS348_03225 IPR039013 Inorganic triphosphatase YgiF CS348_03225 IPR023577 CYTH domain CS348_03230 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme CS348_03230 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CS348_03230 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CS348_03235 IPR011914 RfaE bifunctional protein, domain II CS348_03235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_03235 IPR011913 RfaE bifunctional protein, domain I CS348_03235 IPR011611 Carbohydrate kinase PfkB CS348_03235 IPR004821 Cytidyltransferase-like domain CS348_03235 IPR029056 Ribokinase-like CS348_03235 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_03235 IPR023030 Bifunctional protein HldE CS348_03245 IPR027705 Flotillin family CS348_03245 IPR031905 Flotillin, C-terminal domain CS348_03245 IPR001107 Band 7 domain CS348_03245 IPR036013 Band 7/SPFH domain superfamily CS348_03255 IPR015065 Surface composition regulator CS348_03255 IPR036295 GlgS superfamily CS348_03260 IPR007475 Ubiquinone biosynthesis accessory factor UbiK CS348_03265 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CS348_03265 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CS348_03270 IPR023792 Protein-disulfide oxidoreductase DsbI CS348_03270 IPR023380 DsbB-like superfamily CS348_03270 IPR003752 Disulphide bond formation protein DsbB/BdbC CS348_03275 IPR013766 Thioredoxin domain CS348_03275 IPR001853 DSBA-like thioredoxin domain CS348_03275 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CS348_03275 IPR028588 Thiol:disulfide interchange protein DsbL CS348_03275 IPR036249 Thioredoxin-like superfamily CS348_03280 IPR035391 Arylsulfotransferase, Ig-like domain CS348_03280 IPR010262 Arylsulfotransferase, bacteria CS348_03280 IPR038477 Arylsulfotransferase, N-terminal domain superfamily CS348_03280 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria CS348_03290 IPR023498 Zinc transporter ZupT CS348_03290 IPR003689 Zinc/iron permease CS348_03295 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type CS348_03295 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CS348_03300 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CS348_03300 IPR016185 Pre-ATP-grasp domain superfamily CS348_03305 IPR009576 Biofilm formation YgiB CS348_03315 IPR003423 Outer membrane efflux protein CS348_03315 IPR010130 Type I secretion outer membrane protein, TolC CS348_03320 IPR015797 NUDIX hydrolase-like domain superfamily CS348_03320 IPR020084 NUDIX hydrolase, conserved site CS348_03320 IPR000086 NUDIX hydrolase domain CS348_03320 IPR004385 Nucleoside diphosphate pyrophosphatase CS348_03325 IPR009659 Protein of unknown function DUF1249 CS348_03330 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CS348_03330 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CS348_03330 IPR029052 Metallo-dependent phosphatase-like CS348_03335 IPR029058 Alpha/Beta hydrolase fold CS348_03335 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CS348_03340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_03340 IPR002288 DNA gyrase B subunit, C-terminal CS348_03340 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_03340 IPR001241 DNA topoisomerase, type IIA CS348_03340 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CS348_03340 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CS348_03340 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CS348_03340 IPR018522 DNA topoisomerase, type IIA, conserved site CS348_03340 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CS348_03340 IPR006171 TOPRIM domain CS348_03340 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_03340 IPR003594 Histidine kinase/HSP90-like ATPase CS348_03345 IPR011008 Dimeric alpha-beta barrel CS348_03345 IPR007138 Antibiotic biosynthesis monooxygenase domain CS348_03350 IPR003680 Flavodoxin-like fold CS348_03350 IPR029039 Flavoprotein-like superfamily CS348_03355 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_03355 IPR013727 Two-component sensor kinase, N-terminal CS348_03355 IPR003594 Histidine kinase/HSP90-like ATPase CS348_03355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_03355 IPR005467 Histidine kinase domain CS348_03355 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_03355 IPR003660 HAMP domain CS348_03355 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_03360 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_03360 IPR039420 Transcriptional regulatory protein WalR-like CS348_03360 IPR001789 Signal transduction response regulator, receiver domain CS348_03360 IPR016032 Signal transduction response regulator, C-terminal effector CS348_03360 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_03360 IPR011006 CheY-like superfamily CS348_03365 IPR036700 Bacterial OB-fold superfamily CS348_03365 IPR016052 Bacteriophage 933W, L0136 CS348_03365 IPR005220 Bacterial OB-fold CS348_03370 IPR029442 GyrI-like small molecule binding domain CS348_03370 IPR011256 Regulatory factor, effector binding domain superfamily CS348_03370 IPR010499 Bacterial transcription activator, effector binding CS348_03375 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CS348_03375 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CS348_03375 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CS348_03375 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CS348_03375 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CS348_03375 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CS348_03375 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CS348_03380 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CS348_03380 IPR002123 Phospholipid/glycerol acyltransferase CS348_03385 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_03385 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_03385 IPR011707 Multicopper oxidase, type 3 CS348_03385 IPR001117 Multicopper oxidase, type 1 CS348_03385 IPR011706 Multicopper oxidase, type 2 CS348_03385 IPR008972 Cupredoxin CS348_03385 IPR026589 Cell division protein FtsP CS348_03410 IPR006638 Elp3/MiaB/NifB CS348_03410 IPR020612 Methylthiotransferase, conserved site CS348_03410 IPR007197 Radical SAM CS348_03410 IPR022946 Uncharacterised protein family UPF0313 CS348_03410 IPR013704 Uncharacterised protein family UPF0313, N-terminal CS348_03410 IPR023404 Radical SAM, alpha/beta horseshoe CS348_03410 IPR024560 Uncharacterised protein family UPF0313, C-terminal CS348_03420 IPR006817 Lipoprotein leucine-zipper CS348_03420 IPR016367 Murein-lipoprotein CS348_03435 IPR013108 Amidohydrolase 3 CS348_03435 IPR011059 Metal-dependent hydrolase, composite domain superfamily CS348_03435 IPR032466 Metal-dependent hydrolase CS348_03440 IPR006817 Lipoprotein leucine-zipper CS348_03440 IPR016367 Murein-lipoprotein CS348_03445 IPR024289 Domain of unknown function DUF3828 CS348_03455 IPR030676 Citrate carrier CitT-related CS348_03455 IPR001898 Solute carrier family 13 CS348_03460 IPR036812 NADP-dependent oxidoreductase domain superfamily CS348_03460 IPR023210 NADP-dependent oxidoreductase domain CS348_03460 IPR020471 Aldo/keto reductase CS348_03460 IPR018170 Aldo/keto reductase, conserved site CS348_03465 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CS348_03465 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CS348_03470 IPR018060 DNA binding HTH domain, AraC-type CS348_03470 IPR009057 Homeobox-like domain superfamily CS348_03470 IPR009594 Transcription regulator HTH, AraC, N-terminal CS348_03475 IPR032816 SNARE associated Golgi protein CS348_03475 IPR032818 DedA family CS348_03480 IPR015424 Pyridoxal phosphate-dependent transferase CS348_03480 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_03480 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_03480 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CS348_03480 IPR006233 Cystathionine beta-lyase, bacterial CS348_03490 IPR002898 MotA/TolQ/ExbB proton channel CS348_03490 IPR014164 TonB-system energizer ExbB type-1 CS348_03495 IPR003400 Biopolymer transport protein ExbD/TolR CS348_03495 IPR014170 TonB system transport protein ExbD type-1 CS348_03500 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_03500 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_03500 IPR036291 NAD(P)-binding domain superfamily CS348_03520 IPR020761 Uncharacterised protein family UPF0114, bacteria CS348_03520 IPR005134 Uncharacterised protein family UPF0114 CS348_03525 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CS348_03525 IPR004090 Chemotaxis methyl-accepting receptor CS348_03525 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CS348_03525 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CS348_03525 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CS348_03525 IPR003660 HAMP domain CS348_03530 IPR022574 Protein of unknown function DUF2623 CS348_03540 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_03540 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily CS348_03540 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily CS348_03540 IPR001821 [NiFe]-hydrogenase, small subunit CS348_03540 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CS348_03540 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CS348_03540 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_03545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_03545 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_03545 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_03550 IPR005614 NrfD family CS348_03555 IPR029014 [NiFe]-hydrogenase, large subunit CS348_03555 IPR001501 Nickel-dependent hydrogenase, large subunit CS348_03555 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site CS348_03560 IPR004419 Peptidase A31, hydrogenase expression/formation protein CS348_03560 IPR023430 Peptidase HybD-like domain superfamily CS348_03560 IPR000671 Peptidase A31 family CS348_03565 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CS348_03565 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily CS348_03570 IPR000688 Hydrogenase maturation factor HypA/HybF CS348_03570 IPR039002 Hydrogenase maturation factor HybF CS348_03570 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CS348_03575 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CS348_03575 IPR037254 HupF/HypC superfamily CS348_03575 IPR019812 Hydrogenase assembly chaperone, conserved site CS348_03590 IPR010987 Glutathione S-transferase, C-terminal-like CS348_03590 IPR040079 Glutathione Transferase family CS348_03590 IPR036249 Thioredoxin-like superfamily CS348_03590 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CS348_03590 IPR004045 Glutathione S-transferase, N-terminal CS348_03595 IPR007921 CHAP domain CS348_03595 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CS348_03595 IPR038765 Papain-like cysteine peptidase superfamily CS348_03595 IPR016185 Pre-ATP-grasp domain superfamily CS348_03605 IPR003766 Uronate isomerase CS348_03605 IPR032466 Metal-dependent hydrolase CS348_03610 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_03610 IPR013131 Mannitol dehydrogenase, N-terminal CS348_03610 IPR036291 NAD(P)-binding domain superfamily CS348_03610 IPR000669 Mannitol dehydrogenase CS348_03610 IPR013118 Mannitol dehydrogenase, C-terminal CS348_03610 IPR023027 Mannitol dehydrogenase, conserved site CS348_03610 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_03615 IPR036237 Xylose isomerase-like superfamily CS348_03615 IPR004628 Mannonate dehydratase CS348_03625 IPR011701 Major facilitator superfamily CS348_03625 IPR036259 MFS transporter superfamily CS348_03625 IPR020846 Major facilitator superfamily domain CS348_03630 IPR005318 Outer membrane porin, bacterial CS348_03630 IPR023614 Porin domain superfamily CS348_03635 IPR039672 Lactose permease-like CS348_03635 IPR036259 MFS transporter superfamily CS348_03635 IPR001927 Sodium:galactoside symporter CS348_03635 IPR018043 Sodium:galactoside symporter, conserved site CS348_03640 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CS348_03640 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CS348_03640 IPR008979 Galactose-binding-like domain superfamily CS348_03640 IPR006101 Glycoside hydrolase, family 2 CS348_03640 IPR023232 Glycoside hydrolase, family 2, active site CS348_03640 IPR017853 Glycoside hydrolase superfamily CS348_03640 IPR023230 Glycoside hydrolase, family 2, conserved site CS348_03640 IPR013783 Immunoglobulin-like fold CS348_03640 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CS348_03640 IPR006103 Glycoside hydrolase family 2, catalytic domain CS348_03645 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CS348_03645 IPR009057 Homeobox-like domain superfamily CS348_03645 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_03645 IPR001647 DNA-binding HTH domain, TetR-type CS348_03655 IPR002509 NodB homology domain CS348_03655 IPR037950 Peptidoglycan deacetylase PgdA-like CS348_03655 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CS348_03665 IPR007048 IraD/Gp25-like CS348_03665 IPR023776 Anti-adapter protein, IraD CS348_03670 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_03670 IPR016160 Aldehyde dehydrogenase, cysteine active site CS348_03670 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_03670 IPR015590 Aldehyde dehydrogenase domain CS348_03670 IPR016161 Aldehyde/histidinol dehydrogenase CS348_03670 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CS348_03675 IPR006076 FAD dependent oxidoreductase CS348_03675 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_03685 IPR004758 Amino acid transporter CS348_03685 IPR002293 Amino acid/polyamine transporter I CS348_03695 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_03695 IPR000792 Transcription regulator LuxR, C-terminal CS348_03695 IPR016032 Signal transduction response regulator, C-terminal effector CS348_03700 IPR023885 4Fe4S-binding SPASM domain CS348_03700 IPR013785 Aldolase-type TIM barrel CS348_03700 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme CS348_03700 IPR007197 Radical SAM CS348_03705 IPR000917 Sulfatase, N-terminal CS348_03705 IPR024607 Sulfatase, conserved site CS348_03705 IPR017850 Alkaline-phosphatase-like, core domain superfamily CS348_03710 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain CS348_03710 IPR036390 Winged helix DNA-binding domain superfamily CS348_03710 IPR005119 LysR, substrate-binding CS348_03710 IPR000847 Transcription regulator HTH, LysR CS348_03710 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_03715 IPR040442 Pyruvate kinase-like domain superfamily CS348_03715 IPR011206 Citrate lyase beta subunit-like CS348_03715 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CS348_03715 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_03720 IPR029069 HotDog domain superfamily CS348_03720 IPR002539 MaoC-like dehydratase domain CS348_03720 IPR016790 Thiol ester hydratase, Rv0216, predicted CS348_03725 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain CS348_03725 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily CS348_03725 IPR003702 Acetyl-CoA hydrolase/transferase CS348_03725 IPR037171 NagB/RpiA transferase-like CS348_03730 IPR037523 Vicinal oxygen chelate (VOC) domain CS348_03730 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CS348_03730 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CS348_03735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_03735 IPR005702 Exopolysaccharide synthesis protein CS348_03735 IPR025669 AAA domain CS348_03750 IPR007692 DNA helicase, DnaB type CS348_03750 IPR003593 AAA+ ATPase domain CS348_03750 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CS348_03750 IPR007694 DNA helicase, DnaB-like, C-terminal CS348_03750 IPR007693 DNA helicase, DnaB-like, N-terminal CS348_03750 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CS348_03750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_03760 IPR000962 Zinc finger, DksA/TraR C4-type CS348_03760 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CS348_03760 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CS348_03795 IPR006171 TOPRIM domain CS348_03795 IPR000380 DNA topoisomerase, type IA CS348_03795 IPR003601 DNA topoisomerase, type IA, domain 2 CS348_03795 IPR023406 DNA topoisomerase, type IA, active site CS348_03795 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CS348_03795 IPR013497 DNA topoisomerase, type IA, central CS348_03795 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CS348_03795 IPR005738 DNA topoisomerase III CS348_03795 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CS348_03795 IPR023405 DNA topoisomerase, type IA, core domain CS348_03795 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CS348_03795 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CS348_03810 IPR012340 Nucleic acid-binding, OB-fold CS348_03810 IPR000424 Primosome PriB/single-strand DNA-binding CS348_03810 IPR011344 Single-stranded DNA-binding protein CS348_03815 IPR010106 Recombination-promoting nuclease RpnA CS348_03815 IPR006842 Transposase (putative), YhgA-like CS348_03820 IPR024900 O-acetyl-ADP-ribose deacetylase CS348_03820 IPR002589 Macro domain CS348_03850 IPR013369 Type II secretion system GspE CS348_03850 IPR042181 Type II secretion system, protein E, N-terminal CS348_03850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_03850 IPR001482 Type II/IV secretion system protein CS348_03850 IPR037257 General secretory system II, protein E, N-terminal superfamily CS348_03865 IPR008258 Transglycosylase SLT domain 1 CS348_03865 IPR023346 Lysozyme-like domain superfamily CS348_03875 IPR007001 Bacterial shufflon protein, N-terminal CS348_03875 IPR029017 Enolase-like, N-terminal CS348_03885 IPR002104 Integrase, catalytic domain CS348_03885 IPR035069 TTHA1013/TTHA0281-like CS348_03885 IPR010998 Integrase/recombinase, N-terminal CS348_03885 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_03885 IPR013762 Integrase-like, catalytic domain superfamily CS348_04050 IPR034746 POTRA domain CS348_04050 IPR013686 Polypeptide-transport-associated, ShlB-type CS348_04050 IPR005565 Haemolysin activator HlyB, C-terminal CS348_04085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_04085 IPR021845 Protein of unknown function DUF3440 CS348_04085 IPR002500 Phosphoadenosine phosphosulphate reductase CS348_04095 IPR003115 ParB/Sulfiredoxin CS348_04095 IPR036086 ParB/Sulfiredoxin superfamily CS348_04130 IPR000259 Fimbrial-type adhesion domain CS348_04130 IPR036937 Fimbrial-type adhesion domain superfamily CS348_04130 IPR008966 Adhesion domain superfamily CS348_04135 IPR025885 PapC, N-terminal domain CS348_04135 IPR025949 PapC-like, C-terminal domain CS348_04135 IPR042186 Outer membrane usher protein FimD, plug domain CS348_04135 IPR037224 PapC, N-terminal domain superfamily CS348_04135 IPR000015 Outer membrane usher protein CS348_04135 IPR018030 Fimbrial membrane usher, conserved site CS348_04140 IPR018046 Pili assembly chaperone, conserved site CS348_04140 IPR016148 Pili assembly chaperone, C-terminal CS348_04140 IPR001829 Pili assembly chaperone, bacterial CS348_04140 IPR016147 Pili assembly chaperone, N-terminal CS348_04140 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_04140 IPR013783 Immunoglobulin-like fold CS348_04140 IPR008962 PapD-like superfamily CS348_04310 IPR035923 TT1751-like domain superfamily CS348_04310 IPR005180 Domain of unknown function DUF302 CS348_04310 IPR003691 Putative fluoride ion transporter CrcB CS348_04315 IPR036259 MFS transporter superfamily CS348_04315 IPR020846 Major facilitator superfamily domain CS348_04315 IPR011701 Major facilitator superfamily CS348_04320 IPR006175 YjgF/YER057c/UK114 family CS348_04320 IPR006056 RidA family CS348_04320 IPR035959 RutC-like superfamily CS348_04320 IPR019897 RidA, conserved site CS348_04330 IPR039445 Transcriptional regulator DauR-like, HTH domain CS348_04330 IPR013559 YheO-like CS348_04330 IPR039446 Transcriptional regulator DauR-like CS348_04345 IPR015927 Peptidase S24/S26A/S26B/S26C CS348_04345 IPR006197 Peptidase S24, LexA-like CS348_04345 IPR036286 LexA/Signal peptidase-like superfamily CS348_04345 IPR039418 LexA-like CS348_04350 IPR034739 UvrD/AddA helicase, N-terminal CS348_04350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_04350 IPR000212 DNA helicase, UvrD/REP type CS348_04350 IPR011335 Restriction endonuclease type II-like CS348_04350 IPR014017 UvrD-like DNA helicase, C-terminal CS348_04350 IPR014152 DNA helicase subunit AddA CS348_04350 IPR014016 UvrD-like helicase, ATP-binding domain CS348_04350 IPR011604 Exonuclease, phage-type/RecB, C-terminal CS348_04360 IPR013762 Integrase-like, catalytic domain superfamily CS348_04360 IPR010998 Integrase/recombinase, N-terminal CS348_04360 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_04360 IPR002104 Integrase, catalytic domain CS348_04370 IPR007563 Protein of unknown function DUF554 CS348_04380 IPR011006 CheY-like superfamily CS348_04380 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CS348_04380 IPR011193 Ornithine/lysine/arginine decarboxylase CS348_04380 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CS348_04380 IPR027464 Ornithine decarboxylase, N-terminal CS348_04380 IPR000310 Orn/Lys/Arg decarboxylase, major domain CS348_04380 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_04380 IPR015424 Pyridoxal phosphate-dependent transferase CS348_04380 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CS348_04380 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_04385 IPR004740 Nucleoside:H+ symporter CS348_04385 IPR033667 Nucleoside permease NupG CS348_04385 IPR020846 Major facilitator superfamily domain CS348_04385 IPR036259 MFS transporter superfamily CS348_04390 IPR000189 Prokaryotic transglycosylase, active site CS348_04390 IPR024570 Murein transglycosylase-C, N-terminal CS348_04390 IPR023664 Murein transglycosylase-C CS348_04390 IPR023346 Lysozyme-like domain superfamily CS348_04390 IPR008258 Transglycosylase SLT domain 1 CS348_04395 IPR036766 Fe(II) trafficking protein YggX superfamily CS348_04395 IPR007457 Fe(II) trafficking protein YggX CS348_04400 IPR005760 A/G-specific adenine glycosylase MutY CS348_04400 IPR000445 Helix-hairpin-helix motif CS348_04400 IPR004036 Endonuclease III-like, conserved site-2 CS348_04400 IPR004035 Endonuclease III, iron-sulphur binding site CS348_04400 IPR003265 HhH-GPD domain CS348_04400 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CS348_04400 IPR029119 MutY, C-terminal CS348_04400 IPR011257 DNA glycosylase CS348_04400 IPR015797 NUDIX hydrolase-like domain superfamily CS348_04400 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CS348_04410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_04410 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CS348_04415 IPR007416 Protein of unknown function DUF469 CS348_04420 IPR021307 Protein of unknown function DUF2884 CS348_04425 IPR004550 L-asparaginase, type II CS348_04425 IPR027474 L-asparaginase, N-terminal CS348_04425 IPR036152 Asparaginase/glutaminase-like superfamily CS348_04425 IPR006034 Asparaginase/glutaminase-like CS348_04425 IPR020827 Asparaginase/glutaminase, active site 1 CS348_04425 IPR027475 Asparaginase/glutaminase, active site 2 CS348_04425 IPR027473 L-asparaginase, C-terminal CS348_04425 IPR040919 Asparaginase/glutaminase, C-terminal CS348_04425 IPR037152 L-asparaginase, N-terminal domain superfamily CS348_04430 IPR009592 Protein of unknown function DUF1202 CS348_04435 IPR007197 Radical SAM CS348_04435 IPR034505 Anaerobic coproporphyrinogen-III oxidase CS348_04435 IPR004559 Heme chaperone HemW-like CS348_04435 IPR010723 HemN, C-terminal CS348_04435 IPR006638 Elp3/MiaB/NifB CS348_04435 IPR023404 Radical SAM, alpha/beta horseshoe CS348_04440 IPR029001 Inosine triphosphate pyrophosphatase-like CS348_04440 IPR002637 Ham1-like protein CS348_04440 IPR020922 dITP/XTP pyrophosphatase CS348_04445 IPR005228 Conserved hypothetical protein CHP00251 CS348_04445 IPR036591 YggU-like superfamily CS348_04445 IPR003746 Protein of unknown function DUF167 CS348_04450 IPR003425 CCB3/YggT CS348_04455 IPR001608 Alanine racemase, N-terminal CS348_04455 IPR029066 PLP-binding barrel CS348_04455 IPR011078 Pyridoxal phosphate homeostasis protein CS348_04460 IPR001482 Type II/IV secretion system protein CS348_04460 IPR006321 Pilus retraction protein PilT CS348_04460 IPR003593 AAA+ ATPase domain CS348_04460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_04470 IPR037027 YqgF/RNase H-like domain superfamily CS348_04470 IPR012337 Ribonuclease H-like superfamily CS348_04470 IPR006641 YqgF/RNase H-like domain CS348_04470 IPR005227 Putative pre-16S rRNA nuclease CS348_04475 IPR003774 Protein of unknown function UPF0301 CS348_04480 IPR004215 Prokaryotic glutathione synthetase, N-terminal CS348_04480 IPR016185 Pre-ATP-grasp domain superfamily CS348_04480 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CS348_04480 IPR006284 Glutathione synthetase, prokaryotic CS348_04480 IPR011761 ATP-grasp fold CS348_04480 IPR013815 ATP-grasp fold, subdomain 1 CS348_04485 IPR015947 PUA-like superfamily CS348_04485 IPR006700 Ribosomal RNA small subunit methyltransferase E CS348_04485 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CS348_04485 IPR029028 Alpha/beta knot methyltransferases CS348_04490 IPR007346 Endonuclease I CS348_04495 IPR023483 Uncharacterised protein family SprT CS348_04495 IPR006640 SprT-like CS348_04495 IPR035240 SprT-like, zinc ribbon domain CS348_04500 IPR003663 Sugar/inositol transporter CS348_04500 IPR020846 Major facilitator superfamily domain CS348_04500 IPR005828 Major facilitator, sugar transporter-like CS348_04500 IPR036259 MFS transporter superfamily CS348_04500 IPR005829 Sugar transporter, conserved site CS348_04505 IPR022631 S-adenosylmethionine synthetase, conserved site CS348_04505 IPR022630 S-adenosylmethionine synthetase, C-terminal CS348_04505 IPR022628 S-adenosylmethionine synthetase, N-terminal CS348_04505 IPR002133 S-adenosylmethionine synthetase CS348_04505 IPR022629 S-adenosylmethionine synthetase, central domain CS348_04505 IPR022636 S-adenosylmethionine synthetase superfamily CS348_04525 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CS348_04525 IPR002985 Arginine decarboxylase CS348_04525 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CS348_04525 IPR041128 Arginine decarboxylase, C-terminal helical CS348_04525 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CS348_04525 IPR040634 Arginine decarboxylase, helical bundle domain CS348_04525 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CS348_04525 IPR000183 Ornithine/DAP/Arg decarboxylase CS348_04525 IPR029066 PLP-binding barrel CS348_04530 IPR023694 Agmatinase CS348_04530 IPR005925 Agmatinase-related CS348_04530 IPR006035 Ureohydrolase CS348_04530 IPR023696 Ureohydrolase domain superfamily CS348_04530 IPR020855 Ureohydrolase, manganese-binding site CS348_04535 IPR001915 Peptidase M48 CS348_04540 IPR005475 Transketolase-like, pyrimidine-binding domain CS348_04540 IPR033247 Transketolase family CS348_04540 IPR020826 Transketolase binding site CS348_04540 IPR005478 Transketolase, bacterial-like CS348_04540 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CS348_04540 IPR005474 Transketolase, N-terminal CS348_04540 IPR033248 Transketolase, C-terminal domain CS348_04540 IPR029061 Thiamin diphosphate-binding fold CS348_04545 IPR002178 PTS EIIA type-2 domain CS348_04545 IPR016152 Phosphotransferase/anion transporter CS348_04550 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC CS348_04550 IPR013014 Phosphotransferase system, EIIC component, type 2 CS348_04550 IPR013011 Phosphotransferase system, EIIB component, type 2 CS348_04550 IPR029503 Phosphotransferase system EIIB component, mannitol-specific CS348_04550 IPR003352 Phosphotransferase system, EIIC CS348_04550 IPR036095 PTS system IIB component-like superfamily CS348_04550 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CS348_04555 IPR013149 Alcohol dehydrogenase, C-terminal CS348_04555 IPR013154 Alcohol dehydrogenase, N-terminal CS348_04555 IPR036291 NAD(P)-binding domain superfamily CS348_04555 IPR011032 GroES-like superfamily CS348_04560 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase CS348_04565 IPR038026 MtlR-like superfamily CS348_04565 IPR007761 Mannitol repressor MtlR-like CS348_04570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_04575 IPR003593 AAA+ ATPase domain CS348_04575 IPR003439 ABC transporter-like CS348_04575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_04575 IPR017871 ABC transporter, conserved site CS348_04580 IPR003439 ABC transporter-like CS348_04580 IPR003593 AAA+ ATPase domain CS348_04580 IPR015856 ABC transporter, CbiO/EcfA subunit CS348_04580 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 CS348_04580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_04580 IPR017871 ABC transporter, conserved site CS348_04605 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CS348_04605 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CS348_04605 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CS348_04605 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CS348_04605 IPR006422 D-erythrose-4-phosphate dehydrogenase CS348_04605 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CS348_04605 IPR036291 NAD(P)-binding domain superfamily CS348_04610 IPR015911 Phosphoglycerate kinase, conserved site CS348_04610 IPR015824 Phosphoglycerate kinase, N-terminal CS348_04610 IPR036043 Phosphoglycerate kinase superfamily CS348_04610 IPR001576 Phosphoglycerate kinase CS348_04615 IPR013785 Aldolase-type TIM barrel CS348_04615 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype CS348_04615 IPR000771 Fructose-bisphosphate aldolase, class-II CS348_04620 IPR008910 Conserved TM helix CS348_04620 IPR023408 Mechanosensitive ion channel MscS domain superfamily CS348_04620 IPR006686 Mechanosensitive ion channel MscS, conserved site CS348_04620 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CS348_04620 IPR011066 Mechanosensitive ion channel MscS, C-terminal CS348_04620 IPR006685 Mechanosensitive ion channel MscS CS348_04620 IPR010920 LSM domain superfamily CS348_04625 IPR023445 Arginine exporter protein ArgO, enterobacteria CS348_04625 IPR004777 L-lysine exporter/arginine exporter CS348_04625 IPR001123 Amino acid exporter protein, LeuE-type CS348_04630 IPR007497 Protein of unknown function DUF541 CS348_04635 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_04635 IPR000847 Transcription regulator HTH, LysR CS348_04635 IPR005119 LysR, substrate-binding CS348_04635 IPR036390 Winged helix DNA-binding domain superfamily CS348_04635 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria CS348_04635 IPR017685 HTH-type transcriptional regulator ArgP CS348_04640 IPR037171 NagB/RpiA transferase-like CS348_04640 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CS348_04640 IPR004788 Ribose 5-phosphate isomerase, type A CS348_04645 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CS348_04645 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CS348_04645 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CS348_04645 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS348_04645 IPR002912 ACT domain CS348_04645 IPR036291 NAD(P)-binding domain superfamily CS348_04650 IPR037171 NagB/RpiA transferase-like CS348_04650 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CS348_04650 IPR002698 5-formyltetrahydrofolate cyclo-ligase CS348_04660 IPR036192 Cell division protein ZapA-like superfamily CS348_04660 IPR023771 Cell division protein ZapA, eubacteria CS348_04660 IPR007838 Cell division protein ZapA-like CS348_04670 IPR011978 Uncharacterised protein family UPF0149 CS348_04670 IPR036255 YgfB-like superfamily CS348_04675 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CS348_04675 IPR001714 Peptidase M24, methionine aminopeptidase CS348_04675 IPR000994 Peptidase M24 CS348_04675 IPR036005 Creatinase/aminopeptidase-like CS348_04675 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CS348_04675 IPR007865 Aminopeptidase P, N-terminal CS348_04680 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CS348_04680 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CS348_04680 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase CS348_04680 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_04680 IPR002938 FAD-binding domain CS348_04685 IPR002938 FAD-binding domain CS348_04685 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CS348_04685 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CS348_04685 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_04690 IPR006223 Glycine cleavage system T protein CS348_04690 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CS348_04690 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CS348_04690 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CS348_04690 IPR028896 Aminomethyltransferase-like CS348_04690 IPR022903 Glycine cleavage system T protein, bacteria CS348_04690 IPR006222 Aminomethyltransferase, folate-binding domain CS348_04695 IPR017453 Glycine cleavage system H-protein, subgroup CS348_04695 IPR011053 Single hybrid motif CS348_04695 IPR033753 Glycine cleavage system H-protein/Simiate CS348_04695 IPR002930 Glycine cleavage system H-protein CS348_04695 IPR000089 Biotin/lipoyl attachment CS348_04695 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CS348_04700 IPR015424 Pyridoxal phosphate-dependent transferase CS348_04700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_04700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_04700 IPR003437 Glycine dehydrogenase (decarboxylating) CS348_04700 IPR020581 Glycine cleavage system P protein CS348_04715 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CS348_04715 IPR017853 Glycoside hydrolase superfamily CS348_04715 IPR018120 Glycoside hydrolase family 1, active site CS348_04715 IPR001360 Glycoside hydrolase family 1 CS348_04725 IPR005744 Hly-III CS348_04725 IPR004254 AdipoR/Haemolysin-III-related CS348_04735 IPR006222 Aminomethyltransferase, folate-binding domain CS348_04735 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CS348_04735 IPR017703 YgfZ/GcvT conserved site CS348_04735 IPR023758 tRNA-modifying protein YgfZ CS348_04745 IPR005631 Flavinator of succinate dehydrogenase CS348_04745 IPR036714 Flavinator of succinate dehydrogenase superfamily CS348_04750 IPR009883 Inner membrane protein YgfX CS348_04755 IPR008254 Flavodoxin/nitric oxide synthase CS348_04755 IPR001226 Flavodoxin, conserved site CS348_04755 IPR010086 Flavodoxin, long chain CS348_04755 IPR029039 Flavoprotein-like superfamily CS348_04760 IPR023009 Tyrosine recombinase XerC/XerD CS348_04760 IPR011932 Tyrosine recombinase XerD CS348_04760 IPR004107 Integrase, SAM-like, N-terminal CS348_04760 IPR010998 Integrase/recombinase, N-terminal CS348_04760 IPR002104 Integrase, catalytic domain CS348_04760 IPR013762 Integrase-like, catalytic domain superfamily CS348_04760 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_04765 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily CS348_04765 IPR017937 Thioredoxin, conserved site CS348_04765 IPR036249 Thioredoxin-like superfamily CS348_04765 IPR012336 Thioredoxin-like fold CS348_04765 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CS348_04765 IPR033954 Disulphide bond isomerase, DsbC/G CS348_04770 IPR038763 DHH phosphoesterase superfamily CS348_04770 IPR001667 DDH domain CS348_04770 IPR041122 RecJ, OB domain CS348_04770 IPR004610 Bacterial RecJ exonuclease CS348_04770 IPR003156 DHHA1 domain CS348_04780 IPR006195 Aminoacyl-tRNA synthetase, class II CS348_04780 IPR002313 Lysine-tRNA ligase, class II CS348_04780 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II CS348_04780 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CS348_04780 IPR012340 Nucleic acid-binding, OB-fold CS348_04780 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CS348_04780 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CS348_04785 IPR015797 NUDIX hydrolase-like domain superfamily CS348_04785 IPR000086 NUDIX hydrolase domain CS348_04785 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 CS348_04795 IPR016047 Peptidase M23 CS348_04795 IPR036779 LysM domain superfamily CS348_04795 IPR018392 LysM domain CS348_04795 IPR011055 Duplicated hybrid motif CS348_04810 IPR022907 VapC family CS348_04810 IPR002716 PIN domain CS348_04810 IPR029060 PIN-like domain superfamily CS348_04825 IPR000758 Virulence-related outer membrane protein CS348_04825 IPR027385 Outer membrane protein beta-barrel domain CS348_04825 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CS348_04835 IPR008966 Adhesion domain superfamily CS348_04835 IPR000259 Fimbrial-type adhesion domain CS348_04835 IPR036937 Fimbrial-type adhesion domain superfamily CS348_04840 IPR000015 Outer membrane usher protein CS348_04840 IPR037224 PapC, N-terminal domain superfamily CS348_04840 IPR025885 PapC, N-terminal domain CS348_04840 IPR025949 PapC-like, C-terminal domain CS348_04840 IPR042186 Outer membrane usher protein FimD, plug domain CS348_04840 IPR018030 Fimbrial membrane usher, conserved site CS348_04845 IPR016147 Pili assembly chaperone, N-terminal CS348_04845 IPR018046 Pili assembly chaperone, conserved site CS348_04845 IPR008962 PapD-like superfamily CS348_04845 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_04845 IPR013783 Immunoglobulin-like fold CS348_04845 IPR016148 Pili assembly chaperone, C-terminal CS348_04845 IPR001829 Pili assembly chaperone, bacterial CS348_04865 IPR011541 Nickel/cobalt transporter, high-affinity CS348_04870 IPR038390 Metal-sensitive transcriptional repressor superfamily CS348_04870 IPR003735 Metal-sensitive transcriptional repressor CS348_04875 IPR018227 Amino acid/polyamine transporter 2 CS348_04885 IPR000847 Transcription regulator HTH, LysR CS348_04885 IPR036390 Winged helix DNA-binding domain superfamily CS348_04885 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_04885 IPR005119 LysR, substrate-binding CS348_04890 IPR020610 Thiolase, active site CS348_04890 IPR020617 Thiolase, C-terminal CS348_04890 IPR020616 Thiolase, N-terminal CS348_04890 IPR020615 Thiolase, acyl-enzyme intermediate active site CS348_04890 IPR020613 Thiolase, conserved site CS348_04890 IPR002155 Thiolase CS348_04890 IPR016039 Thiolase-like CS348_04900 IPR011051 RmlC-like cupin domain superfamily CS348_04900 IPR014710 RmlC-like jelly roll fold CS348_04900 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal CS348_04900 IPR021120 KduI/IolB isomerase CS348_04900 IPR007045 5-keto 4-deoxyuronate isomerase CS348_04905 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase CS348_04905 IPR036291 NAD(P)-binding domain superfamily CS348_04905 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_04905 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_04915 IPR005828 Major facilitator, sugar transporter-like CS348_04915 IPR020846 Major facilitator superfamily domain CS348_04915 IPR003663 Sugar/inositol transporter CS348_04915 IPR036259 MFS transporter superfamily CS348_04915 IPR005829 Sugar transporter, conserved site CS348_04920 IPR001920 Asp/Glu racemase CS348_04920 IPR004380 Aspartate racemase CS348_04920 IPR015942 Asp/Glu/hydantoin racemase CS348_04920 IPR018187 Asp/Glu racemase, active site 1 CS348_04920 IPR033134 Asp/Glu racemase, active site 2 CS348_04925 IPR036390 Winged helix DNA-binding domain superfamily CS348_04925 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_04925 IPR000847 Transcription regulator HTH, LysR CS348_04925 IPR005119 LysR, substrate-binding CS348_04925 IPR037414 Transcriptional activator protein LysR, PBP2 domain CS348_04930 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CS348_04930 IPR002986 Diaminopimelate decarboxylase, LysA CS348_04930 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CS348_04930 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CS348_04930 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CS348_04930 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CS348_04930 IPR000183 Ornithine/DAP/Arg decarboxylase CS348_04930 IPR029066 PLP-binding barrel CS348_04935 IPR000843 LacI-type HTH domain CS348_04935 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_04935 IPR028082 Periplasmic binding protein-like I CS348_04940 IPR000843 LacI-type HTH domain CS348_04940 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_04940 IPR028082 Periplasmic binding protein-like I CS348_04945 IPR002123 Phospholipid/glycerol acyltransferase CS348_04945 IPR042099 AMP-dependent synthetase-like superfamily CS348_04945 IPR000873 AMP-dependent synthetase/ligase CS348_04945 IPR020845 AMP-binding, conserved site CS348_04945 IPR023775 Bifunctional protein Aas CS348_04950 IPR023727 Lysophospholipid transporter LplT CS348_04950 IPR011701 Major facilitator superfamily CS348_04950 IPR036259 MFS transporter superfamily CS348_04955 IPR036812 NADP-dependent oxidoreductase domain superfamily CS348_04955 IPR020471 Aldo/keto reductase CS348_04955 IPR023210 NADP-dependent oxidoreductase domain CS348_04960 IPR010305 Protein of unknown function DUF903 CS348_04960 IPR010920 LSM domain superfamily CS348_04965 IPR005496 Integral membrane protein TerC CS348_04970 IPR004230 DNA mismatch repair protein MutH CS348_04970 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II CS348_04970 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily CS348_04970 IPR011335 Restriction endonuclease type II-like CS348_04975 IPR022927 RNA pyrophosphohydrolase RppH CS348_04975 IPR020084 NUDIX hydrolase, conserved site CS348_04975 IPR015797 NUDIX hydrolase-like domain superfamily CS348_04975 IPR000086 NUDIX hydrolase domain CS348_04975 IPR020476 NUDIX hydrolase CS348_04980 IPR018274 PEP-utilising enzyme, active site CS348_04980 IPR023151 PEP-utilising enzyme, conserved site CS348_04980 IPR036637 Phosphohistidine domain superfamily CS348_04980 IPR006318 Phosphotransferase system, enzyme I-like CS348_04980 IPR008731 Phosphotransferase system, enzyme I N-terminal CS348_04980 IPR000121 PEP-utilising enzyme, C-terminal CS348_04980 IPR029016 GAF-like domain superfamily CS348_04980 IPR003018 GAF domain CS348_04980 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_04980 IPR036618 PtsI, HPr-binding domain superfamily CS348_04980 IPR040442 Pyruvate kinase-like domain superfamily CS348_04980 IPR008279 PEP-utilising enzyme, mobile domain CS348_04985 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CS348_04990 IPR020940 Thymidylate synthase, active site CS348_04990 IPR000398 Thymidylate synthase CS348_04990 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CS348_04990 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CS348_05000 IPR012902 Prokaryotic N-terminal methylation site CS348_05005 IPR012902 Prokaryotic N-terminal methylation site CS348_05005 IPR016419 Prepilin peptidase-dependent protein B, predicted CS348_05010 IPR019652 Protein of unknown function DUF2509 CS348_05015 IPR022204 Prepilin peptidase dependent protein C CS348_05015 IPR012902 Prokaryotic N-terminal methylation site CS348_05020 IPR011335 Restriction endonuclease type II-like CS348_05020 IPR041500 RecC, C-terminal CS348_05020 IPR006697 RecBCD enzyme subunit RecC CS348_05020 IPR013986 DExx box DNA helicase domain superfamily CS348_05020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05025 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CS348_05025 IPR011765 Peptidase M16, N-terminal CS348_05025 IPR007863 Peptidase M16, C-terminal CS348_05025 IPR032632 Peptidase M16, middle/third domain CS348_05030 IPR034739 UvrD/AddA helicase, N-terminal CS348_05030 IPR014017 UvrD-like DNA helicase, C-terminal CS348_05030 IPR014016 UvrD-like helicase, ATP-binding domain CS348_05030 IPR011335 Restriction endonuclease type II-like CS348_05030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05030 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CS348_05030 IPR004586 RecBCD enzyme subunit RecB CS348_05030 IPR011604 Exonuclease, phage-type/RecB, C-terminal CS348_05030 IPR000212 DNA helicase, UvrD/REP type CS348_05035 IPR003593 AAA+ ATPase domain CS348_05035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05035 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain CS348_05035 IPR027785 UvrD-like helicase C-terminal domain CS348_05035 IPR006344 RecBCD enzyme subunit RecD CS348_05040 IPR001048 Aspartate/glutamate/uridylate kinase CS348_05040 IPR000182 GNAT domain CS348_05040 IPR036393 Acetylglutamate kinase-like superfamily CS348_05040 IPR033719 N-acetylglutamate synthase, kinase-like domain CS348_05040 IPR010167 Amino-acid N-acetyltransferase CS348_05040 IPR016181 Acyl-CoA N-acyltransferase CS348_05045 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_05045 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CS348_05045 IPR021731 AMIN domain CS348_05060 IPR005300 Lytic transglycosylase MltA, domain B CS348_05060 IPR034654 MltA, 3D domain CS348_05060 IPR026044 Membrane-bound lytic murein transglycosylase A CS348_05060 IPR010611 3D domain CS348_05060 IPR036908 RlpA-like domain superfamily CS348_05065 IPR000594 THIF-type NAD/FAD binding fold CS348_05065 IPR035985 Ubiquitin-activating enzyme CS348_05070 IPR004626 RarD protein CS348_05070 IPR000620 EamA domain CS348_05075 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE CS348_05075 IPR003808 Fe-S metabolism associated domain, SufE-like CS348_05080 IPR000192 Aminotransferase class V domain CS348_05080 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CS348_05080 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA CS348_05080 IPR015424 Pyridoxal phosphate-dependent transferase CS348_05080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_05080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_05085 IPR010305 Protein of unknown function DUF903 CS348_05085 IPR010920 LSM domain superfamily CS348_05090 IPR036390 Winged helix DNA-binding domain superfamily CS348_05090 IPR005119 LysR, substrate-binding CS348_05090 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_05090 IPR000847 Transcription regulator HTH, LysR CS348_05095 IPR006696 Protein of unknown function DUF423 CS348_05100 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CS348_05100 IPR040739 RlmM ferredoxin-like domain CS348_05100 IPR011224 Ribosomal RNA large subunit methyltransferase M CS348_05100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_05105 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_05105 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_05105 IPR001034 DeoR-type HTH domain CS348_05105 IPR014036 DeoR C-terminal sensor domain CS348_05105 IPR037171 NagB/RpiA transferase-like CS348_05105 IPR036390 Winged helix DNA-binding domain superfamily CS348_05110 IPR023750 RbsD-like superfamily CS348_05110 IPR023751 L-fucose mutarotase CS348_05110 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CS348_05115 IPR018483 Carbohydrate kinase, FGGY, conserved site CS348_05115 IPR000577 Carbohydrate kinase, FGGY CS348_05115 IPR013450 L-fuculokinase CS348_05115 IPR018484 Carbohydrate kinase, FGGY, N-terminal CS348_05115 IPR018485 Carbohydrate kinase, FGGY, C-terminal CS348_05120 IPR038391 L-fucose isomerase, domain 1 superfamily CS348_05120 IPR012888 L-fucose isomerase, N-terminal-1 CS348_05120 IPR015888 L-fucose isomerase, C-terminal CS348_05120 IPR038393 L-fucose isomerase, domain 3 superfamily CS348_05120 IPR005763 L-fucose isomerase CS348_05120 IPR038392 L-fucose isomerase, domain 2 superfamily CS348_05120 IPR012889 L-fucose isomerase, N-terminal-2 CS348_05120 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily CS348_05120 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CS348_05125 IPR011701 Major facilitator superfamily CS348_05125 IPR005275 L-fucose permease FucP CS348_05125 IPR020846 Major facilitator superfamily domain CS348_05125 IPR036259 MFS transporter superfamily CS348_05130 IPR004782 L-fucose phosphate aldolase CS348_05130 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CS348_05130 IPR001303 Class II aldolase/adducin N-terminal CS348_05135 IPR013460 Lactaldehyde reductase CS348_05135 IPR039697 Iron-type alcohol dehydrogenase-like CS348_05135 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CS348_05135 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CS348_05140 IPR038969 Flap endonuclease CS348_05140 IPR002421 5'-3' exonuclease, N-terminal CS348_05140 IPR008918 Helix-hairpin-helix motif, class 2 CS348_05140 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CS348_05140 IPR020045 DNA polymerase I-like, H3TH domain CS348_05140 IPR029060 PIN-like domain superfamily CS348_05140 IPR022895 Flap endonuclease Xni CS348_05140 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CS348_05150 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CS348_05150 IPR029009 Allosteric substrate binding domain superfamily CS348_05150 IPR005131 Serine dehydratase beta chain CS348_05150 IPR005130 Serine dehydratase-like, alpha subunit CS348_05155 IPR004694 Hydroxy amino acid transporter CS348_05160 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily CS348_05160 IPR031100 LOG family CS348_05160 IPR021826 Domain of unknown function DUF3412 CS348_05160 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal CS348_05165 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 CS348_05165 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CS348_05165 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal CS348_05170 IPR038228 Syd superfamily CS348_05170 IPR009948 Syd CS348_05180 IPR023376 YqcC-like domain CS348_05180 IPR007384 Protein of unknown function UCP006257 CS348_05180 IPR036814 YqcC-like superfamily CS348_05185 IPR006145 Pseudouridine synthase, RsuA/RluA CS348_05185 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_05185 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CS348_05190 IPR029039 Flavoprotein-like superfamily CS348_05190 IPR008254 Flavodoxin/nitric oxide synthase CS348_05190 IPR001094 Flavodoxin-like CS348_05200 IPR000849 Sugar phosphate transporter CS348_05200 IPR036259 MFS transporter superfamily CS348_05200 IPR020846 Major facilitator superfamily domain CS348_05200 IPR011701 Major facilitator superfamily CS348_05205 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CS348_05205 IPR029065 Enolase C-terminal domain-like CS348_05205 IPR034598 D-Glucarate dehydratase-like CS348_05205 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CS348_05205 IPR034593 Mandelate racemase-like CS348_05205 IPR029017 Enolase-like, N-terminal CS348_05205 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CS348_05205 IPR036849 Enolase-like, C-terminal domain superfamily CS348_05210 IPR036849 Enolase-like, C-terminal domain superfamily CS348_05210 IPR017653 Glucarate dehydratase CS348_05210 IPR034593 Mandelate racemase-like CS348_05210 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CS348_05210 IPR029017 Enolase-like, N-terminal CS348_05210 IPR029065 Enolase C-terminal domain-like CS348_05210 IPR034598 D-Glucarate dehydratase-like CS348_05215 IPR036129 Glycerate kinase superfamily CS348_05215 IPR018197 Glycerate kinase, restriction-enzyme-like fold CS348_05215 IPR018193 Glycerate kinase, flavodoxin-like fold CS348_05215 IPR004381 Glycerate kinase CS348_05220 IPR005467 Histidine kinase domain CS348_05220 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_05220 IPR003594 Histidine kinase/HSP90-like ATPase CS348_05220 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_05220 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_05220 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CS348_05220 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_05220 IPR011006 CheY-like superfamily CS348_05220 IPR003660 HAMP domain CS348_05220 IPR036641 HPT domain superfamily CS348_05220 IPR019247 Histidine kinase BarA, N-terminal CS348_05220 IPR001789 Signal transduction response regulator, receiver domain CS348_05225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_05225 IPR030390 RNA methyltransferase TrmA, active site CS348_05225 IPR030391 RNA methyltransferase TrmA, conserved site CS348_05225 IPR010280 (Uracil-5)-methyltransferase family CS348_05225 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CS348_05225 IPR002792 TRAM domain CS348_05225 IPR012340 Nucleic acid-binding, OB-fold CS348_05230 IPR012676 TGS-like CS348_05230 IPR033655 RelA, TGS domain CS348_05230 IPR002912 ACT domain CS348_05230 IPR004095 TGS CS348_05230 IPR007685 RelA/SpoT CS348_05230 IPR004811 RelA/SpoT family CS348_05230 IPR003607 HD/PDEase domain CS348_05230 IPR012675 Beta-grasp domain superfamily CS348_05235 IPR010985 Ribbon-helix-helix CS348_05235 IPR038296 Antitoxin ParD superfamily CS348_05235 IPR022789 Antitoxin ParD CS348_05250 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CS348_05250 IPR011551 NTP pyrophosphohydrolase MazG CS348_05255 IPR033828 CTP synthase GATase domain CS348_05255 IPR029062 Class I glutamine amidotransferase-like CS348_05255 IPR004468 CTP synthase CS348_05255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05255 IPR017456 CTP synthase, N-terminal CS348_05255 IPR017926 Glutamine amidotransferase CS348_05260 IPR020811 Enolase, N-terminal CS348_05260 IPR020809 Enolase, conserved site CS348_05260 IPR029017 Enolase-like, N-terminal CS348_05260 IPR020810 Enolase, C-terminal TIM barrel domain CS348_05260 IPR000941 Enolase CS348_05260 IPR036849 Enolase-like, C-terminal domain superfamily CS348_05265 IPR024924 7-carboxy-7-deazaguanine synthase-like CS348_05265 IPR007197 Radical SAM CS348_05265 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria CS348_05265 IPR013785 Aldolase-type TIM barrel CS348_05270 IPR001279 Metallo-beta-lactamase CS348_05270 IPR000544 Octanoyltransferase CS348_05270 IPR020605 Octanoyltransferase, conserved site CS348_05270 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CS348_05270 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CS348_05275 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family CS348_05275 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily CS348_05285 IPR001433 Oxidoreductase FAD/NAD(P)-binding CS348_05285 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CS348_05285 IPR029039 Flavoprotein-like superfamily CS348_05285 IPR001094 Flavodoxin-like CS348_05285 IPR008254 Flavodoxin/nitric oxide synthase CS348_05285 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CS348_05285 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CS348_05285 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CS348_05285 IPR017938 Riboflavin synthase-like beta-barrel CS348_05285 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CS348_05285 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria CS348_05285 IPR017927 FAD-binding domain, ferredoxin reductase-type CS348_05290 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CS348_05290 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CS348_05290 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CS348_05290 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit CS348_05290 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CS348_05300 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CS348_05300 IPR002500 Phosphoadenosine phosphosulphate reductase CS348_05300 IPR011800 Phosphoadenosine phosphosulphate reductase CysH CS348_05300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_05305 IPR022747 Salmonella outer protein D CS348_05310 IPR035011 CRISPR-associated endonuclease/helicase Cas3 CS348_05310 IPR006483 CRISPR-associated Cas3-type HD domain CS348_05310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05310 IPR006474 Helicase Cas3, CRISPR-associated, core CS348_05310 IPR001650 Helicase, C-terminal CS348_05310 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_05310 IPR011545 DEAD/DEAH box helicase domain CS348_05310 IPR038257 CRISPR-associated Cas3-type HD domain superfamily CS348_05325 IPR010148 CRISPR-associated protein, CT1975 CS348_05330 IPR013422 CRISPR-associated protein Cas5, N-terminal CS348_05330 IPR021124 CRISPR-associated protein, Cas5 CS348_05330 IPR010147 CRISPR-associated protein, CasD CS348_05340 IPR033641 CRISPR-associated protein Cas1, type I-E CS348_05340 IPR002729 CRISPR-associated protein Cas1 CS348_05340 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain CS348_05340 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype CS348_05340 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain CS348_05345 IPR010152 CRISPR-associated protein Cas2 subtype CS348_05350 IPR007484 Peptidase M28 CS348_05355 IPR002500 Phosphoadenosine phosphosulphate reductase CS348_05355 IPR011784 Sulphate adenylyltransferase, small subunit CS348_05355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_05360 IPR009000 Translation protein, beta-barrel domain superfamily CS348_05360 IPR031157 Tr-type G domain, conserved site CS348_05360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05360 IPR005225 Small GTP-binding protein domain CS348_05360 IPR011779 Sulphate adenylyltransferase, large subunit CS348_05360 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CS348_05360 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain CS348_05360 IPR000795 Transcription factor, GTP-binding domain CS348_05365 IPR002891 Adenylyl-sulfate kinase CS348_05365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05370 IPR022721 Protein of unknown function DUF3561 CS348_05375 IPR023081 Cell division protein FtsB CS348_05375 IPR007060 Septum formation initiator FtsL/DivIC CS348_05380 IPR034683 Cytidylyltransferase IspD/TarI CS348_05380 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CS348_05380 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CS348_05380 IPR029044 Nucleotide-diphospho-sugar transferases CS348_05385 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CS348_05385 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CS348_05385 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CS348_05390 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_05390 IPR042214 Pseudouridine synthase, TruD, catalytic domain CS348_05390 IPR001656 Pseudouridine synthase, TruD CS348_05390 IPR020119 Pseudouridine synthase TruD, conserved site CS348_05390 IPR011760 Pseudouridine synthase, TruD, insertion domain CS348_05395 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CS348_05395 IPR030048 Survival protein SurE CS348_05395 IPR036523 SurE-like phosphatase/nucleotidase superfamily CS348_05400 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CS348_05400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_05405 IPR016047 Peptidase M23 CS348_05405 IPR011055 Duplicated hybrid motif CS348_05405 IPR018392 LysM domain CS348_05405 IPR036779 LysM domain superfamily CS348_05410 IPR007630 RNA polymerase sigma-70 region 4 CS348_05410 IPR013325 RNA polymerase sigma factor, region 2 CS348_05410 IPR007627 RNA polymerase sigma-70 region 2 CS348_05410 IPR007624 RNA polymerase sigma-70 region 3 CS348_05410 IPR009042 RNA polymerase sigma-70 region 1.2 CS348_05410 IPR014284 RNA polymerase sigma-70 like domain CS348_05410 IPR013324 RNA polymerase sigma factor, region 3/4-like CS348_05410 IPR000943 RNA polymerase sigma-70 CS348_05410 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_05410 IPR012761 RNA polymerase sigma factor RpoS CS348_05420 IPR002830 UbiD decarboxylyase family CS348_05420 IPR032902 Phenolic acid decarboxylase subunit C CS348_05425 IPR032901 Probable UbiX-like flavin prenyltransferase CS348_05425 IPR004507 Flavin prenyltransferase UbiX-like CS348_05425 IPR003382 Flavoprotein CS348_05425 IPR036551 Flavin prenyltransferase-like CS348_05430 IPR036390 Winged helix DNA-binding domain superfamily CS348_05430 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_05430 IPR023187 Transcriptional regulator MarR-type, conserved site CS348_05430 IPR000835 MarR-type HTH domain CS348_05435 IPR001034 DeoR-type HTH domain CS348_05435 IPR036390 Winged helix DNA-binding domain superfamily CS348_05435 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_05435 IPR014036 DeoR C-terminal sensor domain CS348_05435 IPR037171 NagB/RpiA transferase-like CS348_05435 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_05440 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CS348_05440 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CS348_05440 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_05440 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_05440 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CS348_05440 IPR036291 NAD(P)-binding domain superfamily CS348_05440 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CS348_05445 IPR031475 Nucleotide-binding C-terminal domain CS348_05445 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily CS348_05445 IPR010737 Four-carbon acid sugar kinase, N-terminal domain CS348_05445 IPR042213 Nucleotide-binding, C-terminal domain superfamily CS348_05450 IPR001303 Class II aldolase/adducin N-terminal CS348_05450 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CS348_05455 IPR036237 Xylose isomerase-like superfamily CS348_05455 IPR026040 Hydroxypyruvate isomerase-like CS348_05455 IPR013022 Xylose isomerase-like, TIM barrel domain CS348_05460 IPR001509 NAD-dependent epimerase/dehydratase CS348_05460 IPR036291 NAD(P)-binding domain superfamily CS348_05465 IPR003474 Gluconate transporter CS348_05470 IPR005119 LysR, substrate-binding CS348_05470 IPR000847 Transcription regulator HTH, LysR CS348_05470 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_05470 IPR036390 Winged helix DNA-binding domain superfamily CS348_05475 IPR005829 Sugar transporter, conserved site CS348_05475 IPR020846 Major facilitator superfamily domain CS348_05475 IPR036259 MFS transporter superfamily CS348_05475 IPR004638 Drug resistance transporter EmrB-like CS348_05475 IPR011701 Major facilitator superfamily CS348_05485 IPR007696 DNA mismatch repair protein MutS, core CS348_05485 IPR036678 MutS, connector domain superfamily CS348_05485 IPR005748 DNA mismatch repair protein MutS CS348_05485 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CS348_05485 IPR017261 DNA mismatch repair protein MutS/MSH CS348_05485 IPR007860 DNA mismatch repair protein MutS, connector domain CS348_05485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05485 IPR000432 DNA mismatch repair protein MutS, C-terminal CS348_05485 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CS348_05485 IPR016151 DNA mismatch repair protein MutS, N-terminal CS348_05485 IPR007861 DNA mismatch repair protein MutS, clamp CS348_05495 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CS348_05495 IPR029052 Metallo-dependent phosphatase-like CS348_05520 IPR006830 InvH outer membrane lipoprotein CS348_05525 IPR009057 Homeobox-like domain superfamily CS348_05525 IPR018060 DNA binding HTH domain, AraC-type CS348_05525 IPR018062 HTH domain AraC-type, conserved site CS348_05535 IPR003520 Salmonella/Shigella invasion protein E CS348_05535 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC CS348_05535 IPR010812 Hypersensitivity response secretion-like, HrpJ CS348_05540 IPR042196 FHIPEP, domain 4 CS348_05540 IPR025505 FHIPEP conserved site CS348_05540 IPR042194 FHIPEP, domain 1 CS348_05540 IPR042193 FHIPEP, domain 3 CS348_05540 IPR006302 Type III secretion protein HrcV CS348_05540 IPR001712 Type III secretion system FHIPEP CS348_05545 IPR003065 Surface presentation of antigens protein SpaK CS348_05550 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CS348_05550 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CS348_05550 IPR040627 T3SS EscN ATPase, C-terminal CS348_05550 IPR003593 AAA+ ATPase domain CS348_05550 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CS348_05550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05550 IPR005714 ATPase, type III secretion system, FliI/YscN CS348_05555 IPR002954 Salmonella surface presentation of antigen M protein CS348_05560 IPR003066 Salmonella invasion protein InvJ CS348_05565 IPR001543 Surface presentation of antigen (SpoA) CS348_05565 IPR036429 SpoA-like superfamily CS348_05565 IPR003283 Type III secretion system outer membrane, SpaO CS348_05565 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO CS348_05570 IPR005838 Type III secretion system inner membrane P protein CS348_05570 IPR005773 Yop virulence translocation protein R CS348_05575 IPR006306 Type III secretion protein HrpO CS348_05575 IPR002191 Bacterial export protein family 3 CS348_05580 IPR006304 Type III secretion protein SpaR/YscT CS348_05580 IPR002010 Type III secretion system inner membrane R protein CS348_05585 IPR006307 Type III exporter system, secretion apparatus protein BsaZ CS348_05585 IPR029025 Type III secretion system substrate exporter, C-terminal CS348_05585 IPR006135 Type III secretion system substrate exporter CS348_05590 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD CS348_05590 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup CS348_05590 IPR011716 Tetratricopeptide TPR-3 CS348_05590 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_05595 IPR006972 Secretion system effector C, SseC-like CS348_05595 IPR032391 Invasin IpaB, N-terminal CS348_05595 IPR003895 Type III secretion system, invasin protein B CS348_05600 IPR005427 Salmonella/Shigella invasin protein C CS348_05605 IPR036708 BipD-like superfamily CS348_05605 IPR009483 Type III secretion systems tip complex components CS348_05610 IPR015138 Salmonella invasion protein A, N-terminal CS348_05610 IPR023225 Salmonella invasion protein A, chaperone-binding CS348_05610 IPR023224 Salmonella invasion protein A, C-terminal actin-binding domain superfamily CS348_05615 IPR036736 ACP-like superfamily CS348_05615 IPR009081 Phosphopantetheine binding ACP domain CS348_05625 IPR010261 Tir chaperone protein (CesT) family CS348_05630 IPR015203 SicP binding CS348_05630 IPR000242 PTP type protein phosphatase CS348_05630 IPR029021 Protein-tyrosine phosphatase-like CS348_05630 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH CS348_05630 IPR003595 Protein-tyrosine phosphatase, catalytic CS348_05630 IPR000387 Tyrosine specific protein phosphatases domain CS348_05630 IPR014773 Virulence factor YopE, GAP domain CS348_05630 IPR037168 Virulence factor YopE, GAP domain superfamily CS348_05630 IPR011070 Globular protein, non-globular alpha/beta subunit CS348_05630 IPR016130 Protein-tyrosine phosphatase, active site CS348_05635 IPR009057 Homeobox-like domain superfamily CS348_05635 IPR038965 Transposase InsF-like CS348_05640 IPR023346 Lysozyme-like domain superfamily CS348_05640 IPR008258 Transglycosylase SLT domain 1 CS348_05645 IPR019734 Tetratricopeptide repeat CS348_05645 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_05645 IPR016032 Signal transduction response regulator, C-terminal effector CS348_05645 IPR013026 Tetratricopeptide repeat-containing domain CS348_05645 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_05645 IPR039420 Transcriptional regulatory protein WalR-like CS348_05645 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_05650 IPR018062 HTH domain AraC-type, conserved site CS348_05650 IPR018060 DNA binding HTH domain, AraC-type CS348_05650 IPR009057 Homeobox-like domain superfamily CS348_05650 IPR020449 Transcription regulator HTH, AraC- type CS348_05655 IPR019029 Type III secretion system, PrgH/EprH-like CS348_05655 IPR013387 Type III secretion system, PrgH/EprH CS348_05660 IPR021123 Type III secretion, needle-protein-like CS348_05660 IPR011841 Type III secretion system, needle protein CS348_05660 IPR037203 Type III secretion, needle-protein-like superfamily CS348_05670 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ CS348_05670 IPR006182 Secretory protein YscJ/FliF CS348_05675 IPR013388 Type III secretion apparatus protein OrgA/MxiK CS348_05690 IPR009057 Homeobox-like domain superfamily CS348_05690 IPR020449 Transcription regulator HTH, AraC- type CS348_05690 IPR018062 HTH domain AraC-type, conserved site CS348_05690 IPR018060 DNA binding HTH domain, AraC-type CS348_05710 IPR037294 ABC transporter, BtuC-like CS348_05710 IPR001626 ABC transporter, TroCD-like CS348_05715 IPR001626 ABC transporter, TroCD-like CS348_05715 IPR037294 ABC transporter, BtuC-like CS348_05720 IPR003439 ABC transporter-like CS348_05720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05720 IPR017871 ABC transporter, conserved site CS348_05720 IPR003593 AAA+ ATPase domain CS348_05725 IPR006129 Adhesin B CS348_05725 IPR006128 Adhesion lipoprotein CS348_05725 IPR006127 Periplasmic solute binding protein, ZnuA-like CS348_05730 IPR020483 Uncharacterised protein family YgbA CS348_05735 IPR003018 GAF domain CS348_05735 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_05735 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CS348_05735 IPR025944 Sigma-54 interaction domain, conserved site CS348_05735 IPR009057 Homeobox-like domain superfamily CS348_05735 IPR029016 GAF-like domain superfamily CS348_05735 IPR002197 DNA binding HTH domain, Fis-type CS348_05735 IPR003593 AAA+ ATPase domain CS348_05735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05740 IPR036921 PurM-like, N-terminal domain superfamily CS348_05740 IPR016188 PurM-like, N-terminal domain CS348_05740 IPR036676 PurM-like, C-terminal domain superfamily CS348_05740 IPR010918 PurM-like, C-terminal domain CS348_05740 IPR011854 Carbamoyl dehydratase HypE CS348_05745 IPR042243 HypD, domain 2 CS348_05745 IPR002780 Hydrogenase formation HypD protein CS348_05745 IPR042244 HypD, domain 1 CS348_05750 IPR037254 HupF/HypC superfamily CS348_05750 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CS348_05750 IPR019812 Hydrogenase assembly chaperone, conserved site CS348_05755 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05755 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CS348_05755 IPR004392 Hydrogenase maturation factor HypB CS348_05760 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CS348_05760 IPR000688 Hydrogenase maturation factor HypA/HybF CS348_05775 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_05775 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_05780 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CS348_05780 IPR003918 NADH:ubiquinone oxidoreductase CS348_05785 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CS348_05785 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CS348_05790 IPR001135 NADH-quinone oxidoreductase, subunit D CS348_05790 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CS348_05790 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CS348_05790 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CS348_05790 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CS348_05790 IPR001501 Nickel-dependent hydrogenase, large subunit CS348_05790 IPR029014 [NiFe]-hydrogenase, large subunit CS348_05795 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_05795 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_05795 IPR010226 NADH-quinone oxidoreductase, chain I CS348_05800 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CS348_05800 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CS348_05805 IPR010005 Formate hydrogenlyase maturation HycH CS348_05810 IPR000671 Peptidase A31 family CS348_05810 IPR023430 Peptidase HybD-like domain superfamily CS348_05810 IPR004420 Peptidase A31, hydrogenase maturation protease HycI CS348_05820 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_05820 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_05825 IPR011125 Zinc finger, HypF-type CS348_05825 IPR001792 Acylphosphatase-like domain CS348_05825 IPR036046 Acylphosphatase-like domain superfamily CS348_05825 IPR017968 Acylphosphatase, conserved site CS348_05825 IPR004421 Carbamoyltransferase, HypF-type CS348_05825 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CS348_05825 IPR041440 HypF, Kae1-like domain CS348_05825 IPR006070 YrdC-like domain CS348_05830 IPR041364 Rubredoxin binding domain CS348_05830 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase CS348_05830 IPR023753 FAD/NAD(P)-binding domain CS348_05830 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_05835 IPR016440 Rubredoxin-oxygen oxidoreductase CS348_05835 IPR024935 Rubredoxin domain CS348_05835 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin CS348_05835 IPR001279 Metallo-beta-lactamase CS348_05835 IPR029039 Flavoprotein-like superfamily CS348_05835 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CS348_05835 IPR008254 Flavodoxin/nitric oxide synthase CS348_05835 IPR024934 Rubredoxin-like domain CS348_05840 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CS348_05840 IPR003018 GAF domain CS348_05840 IPR003593 AAA+ ATPase domain CS348_05840 IPR023944 Anaerobic nitric oxide reductase transcription regulator CS348_05840 IPR025944 Sigma-54 interaction domain, conserved site CS348_05840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05840 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_05840 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CS348_05840 IPR029016 GAF-like domain superfamily CS348_05840 IPR009057 Homeobox-like domain superfamily CS348_05845 IPR035474 KpsF-like, SIS domain CS348_05845 IPR000644 CBS domain CS348_05845 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CS348_05845 IPR001347 Sugar isomerase (SIS) CS348_05850 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_05850 IPR037171 NagB/RpiA transferase-like CS348_05850 IPR001034 DeoR-type HTH domain CS348_05850 IPR014036 DeoR C-terminal sensor domain CS348_05850 IPR036390 Winged helix DNA-binding domain superfamily CS348_05850 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_05855 IPR009693 Glucitol operon activator CS348_05860 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_05860 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_05860 IPR036291 NAD(P)-binding domain superfamily CS348_05865 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily CS348_05865 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup CS348_05865 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component CS348_05870 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal CS348_05870 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal CS348_05870 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II CS348_05875 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor CS348_05880 IPR031304 Transglycosylase SLT domain 2 CS348_05880 IPR011757 Lytic transglycosylase MltB CS348_05880 IPR023346 Lysozyme-like domain superfamily CS348_05890 IPR036653 CinA-like, C-terminal CS348_05890 IPR008136 CinA, C-terminal CS348_05895 IPR023400 DNA recombination and repair protein RecA, C-terminal CS348_05895 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_05895 IPR020584 DNA recombination/repair protein RecA, conserved site CS348_05895 IPR013765 DNA recombination and repair protein RecA CS348_05895 IPR003593 AAA+ ATPase domain CS348_05895 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CS348_05895 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CS348_05900 IPR003783 Regulatory protein RecX CS348_05900 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_05910 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CS348_05910 IPR003156 DHHA1 domain CS348_05910 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CS348_05910 IPR009000 Translation protein, beta-barrel domain superfamily CS348_05910 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CS348_05910 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CS348_05910 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CS348_05910 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CS348_05910 IPR002318 Alanine-tRNA ligase, class IIc CS348_05915 IPR036107 Carbon storage regulator superfamily CS348_05915 IPR003751 Translational regulator CsrA CS348_05950 IPR041492 Haloacid dehalogenase-like hydrolase CS348_05950 IPR006439 HAD hydrolase, subfamily IA CS348_05950 IPR036412 HAD-like superfamily CS348_05950 IPR010976 Beta-phosphoglucomutase hydrolase CS348_05950 IPR023214 HAD superfamily CS348_05950 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CS348_05955 IPR032816 SNARE associated Golgi protein CS348_05960 IPR007370 Glutamate--cysteine ligase CS348_05960 IPR006334 Glutamate--cysteine ligase, monofunctional CS348_05960 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CS348_05965 IPR003815 S-ribosylhomocysteinase (LuxS) CS348_05965 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CS348_05965 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily CS348_05975 IPR011701 Major facilitator superfamily CS348_05975 IPR036259 MFS transporter superfamily CS348_05975 IPR020846 Major facilitator superfamily domain CS348_05975 IPR004638 Drug resistance transporter EmrB-like CS348_05980 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CS348_05980 IPR005694 Efflux pump membrane protein CS348_05985 IPR036390 Winged helix DNA-binding domain superfamily CS348_05985 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_05985 IPR023187 Transcriptional regulator MarR-type, conserved site CS348_05985 IPR000835 MarR-type HTH domain CS348_05995 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CS348_06000 IPR035906 MetI-like superfamily CS348_06000 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_06005 IPR003593 AAA+ ATPase domain CS348_06005 IPR000644 CBS domain CS348_06005 IPR017871 ABC transporter, conserved site CS348_06005 IPR003439 ABC transporter-like CS348_06005 IPR005892 Glycine betaine transport ATP-binding subunit CS348_06005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06015 IPR030475 Ribonucleotide reductase small subunit, acitve site CS348_06015 IPR033909 Ribonucleotide reductase small subunit CS348_06015 IPR026494 Ribonucleoside reductase subunit beta, NrdF CS348_06015 IPR000358 Ribonucleotide reductase small subunit family CS348_06015 IPR012348 Ribonucleotide reductase-like CS348_06015 IPR009078 Ferritin-like superfamily CS348_06020 IPR039718 Ribonucleoside-diphosphate reductase large subunit CS348_06020 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CS348_06020 IPR013346 Ribonucleotide reductase, class I , alpha subunit CS348_06020 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE CS348_06020 IPR000788 Ribonucleotide reductase large subunit, C-terminal CS348_06020 IPR013509 Ribonucleotide reductase large subunit, N-terminal CS348_06020 IPR013554 Ribonucleotide reductase N-terminal CS348_06025 IPR004465 Ribonucleotide reductase Class Ib, NrdI CS348_06025 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CS348_06025 IPR029039 Flavoprotein-like superfamily CS348_06030 IPR036249 Thioredoxin-like superfamily CS348_06030 IPR002109 Glutaredoxin CS348_06030 IPR011909 Glutaredoxin-like protein NrdH CS348_06040 IPR029032 AhpD-like CS348_06040 IPR004675 Alkylhydroperoxidase AhpD core CS348_06040 IPR003779 Carboxymuconolactone decarboxylase-like CS348_06045 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_06045 IPR036390 Winged helix DNA-binding domain superfamily CS348_06045 IPR015424 Pyridoxal phosphate-dependent transferase CS348_06045 IPR004839 Aminotransferase, class I/classII CS348_06045 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_06045 IPR000524 Transcription regulator HTH, GntR CS348_06050 IPR010279 Inner membrane protein YqjD/ElaB CS348_06055 IPR018994 Protein of unknown function DUF2002 CS348_06060 IPR010574 L-alanine exporter AlaE CS348_06080 IPR027454 Histone-like protein H-NS, N-terminal CS348_06080 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily CS348_06080 IPR027444 Histone-like protein H-NS, C-terminal domain CS348_06080 IPR001801 Histone-like protein H-NS CS348_06090 IPR001763 Rhodanese-like domain CS348_06090 IPR021309 Protein of unknown function DUF2892 CS348_06090 IPR036873 Rhodanese-like domain superfamily CS348_06095 IPR011991 ArsR-like helix-turn-helix domain CS348_06095 IPR036390 Winged helix DNA-binding domain superfamily CS348_06095 IPR001845 HTH ArsR-type DNA-binding domain CS348_06095 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_06100 IPR000612 Proteolipid membrane potential modulator CS348_06110 IPR018392 LysM domain CS348_06110 IPR014004 Transport-associated and nodulation domain, bacteria CS348_06110 IPR007055 BON domain CS348_06110 IPR036779 LysM domain superfamily CS348_06115 IPR011711 GntR, C-terminal CS348_06115 IPR008920 Transcription regulator FadR/GntR, C-terminal CS348_06115 IPR000524 Transcription regulator HTH, GntR CS348_06115 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_06115 IPR036390 Winged helix DNA-binding domain superfamily CS348_06120 IPR011265 GABA permease CS348_06120 IPR004841 Amino acid permease/ SLC12A domain CS348_06120 IPR004840 Amino acid permease, conserved site CS348_06125 IPR004632 4-aminobutyrate aminotransferase, bacterial CS348_06125 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_06125 IPR015424 Pyridoxal phosphate-dependent transferase CS348_06125 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_06125 IPR005814 Aminotransferase class-III CS348_06130 IPR016160 Aldehyde dehydrogenase, cysteine active site CS348_06130 IPR010102 Succinate semialdehyde dehydrogenase CS348_06130 IPR015590 Aldehyde dehydrogenase domain CS348_06130 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_06130 IPR016161 Aldehyde/histidinol dehydrogenase CS348_06130 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CS348_06130 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_06135 IPR006076 FAD dependent oxidoreductase CS348_06135 IPR030862 L-2-hydroxyglutarate dehydrogenase CS348_06135 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_06140 IPR042098 Taurine dioxygenase TauD-like superfamily CS348_06140 IPR015038 Glutarate 2-hydroxylase GlaH CS348_06145 IPR002823 Protein of unknown function DUF112, transmembrane CS348_06160 IPR011006 CheY-like superfamily CS348_06160 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_06160 IPR039420 Transcriptional regulatory protein WalR-like CS348_06160 IPR001789 Signal transduction response regulator, receiver domain CS348_06160 IPR016032 Signal transduction response regulator, C-terminal effector CS348_06160 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_06165 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_06165 IPR013727 Two-component sensor kinase, N-terminal CS348_06165 IPR003660 HAMP domain CS348_06165 IPR003594 Histidine kinase/HSP90-like ATPase CS348_06165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_06165 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_06165 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_06165 IPR005467 Histidine kinase domain CS348_06170 IPR004688 Transition metal uptake transporter nickel/cobalt CS348_06170 IPR011541 Nickel/cobalt transporter, high-affinity CS348_06185 IPR007488 Protein of unknown function DUF535 CS348_06190 IPR001646 Pentapeptide repeat CS348_06200 IPR039426 Vitamin B12 transporter BtuB-like CS348_06200 IPR012910 TonB-dependent receptor, plug domain CS348_06200 IPR037066 TonB-dependent receptor, plug domain superfamily CS348_06200 IPR000531 TonB-dependent receptor-like, beta-barrel CS348_06200 IPR010105 TonB-dependent siderophore receptor CS348_06200 IPR010917 TonB-dependent receptor, conserved site CS348_06200 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CS348_06205 IPR029058 Alpha/Beta hydrolase fold CS348_06205 IPR000801 Putative esterase CS348_06215 IPR003593 AAA+ ATPase domain CS348_06215 IPR003439 ABC transporter-like CS348_06215 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_06215 IPR017871 ABC transporter, conserved site CS348_06215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06215 IPR039421 Type I protein exporter CS348_06215 IPR011527 ABC transporter type 1, transmembrane domain CS348_06220 IPR010610 Domain of unknown function DUF1205 CS348_06220 IPR030953 Glycosyltransferase, activator-dependent family CS348_06230 IPR001492 Flagellin CS348_06230 IPR001029 Flagellin, D0/D1 domain CS348_06230 IPR014981 Flagellin D3 CS348_06235 IPR003223 Flagellin phase1 repressor CS348_06260 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_06260 IPR013762 Integrase-like, catalytic domain superfamily CS348_06260 IPR002104 Integrase, catalytic domain CS348_06330 IPR010998 Integrase/recombinase, N-terminal CS348_06330 IPR038488 Integrase, DNA-binding domain superfamily CS348_06330 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_06330 IPR013762 Integrase-like, catalytic domain superfamily CS348_06330 IPR002104 Integrase, catalytic domain CS348_06330 IPR025166 Integrase, DNA-binding domain CS348_06340 IPR010129 Type I secretion membrane fusion protein, HlyD family CS348_06340 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CS348_06345 IPR003593 AAA+ ATPase domain CS348_06345 IPR011917 ABC transporter, lipid A export, MsbA CS348_06345 IPR011527 ABC transporter type 1, transmembrane domain CS348_06345 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_06345 IPR017871 ABC transporter, conserved site CS348_06345 IPR003439 ABC transporter-like CS348_06345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06360 IPR020081 SsrA-binding protein, conserved site CS348_06360 IPR023620 Small protein B CS348_06360 IPR000037 SsrA-binding protein CS348_06365 IPR023393 START-like domain superfamily CS348_06365 IPR005031 Coenzyme Q-binding protein COQ10, START domain CS348_06370 IPR037021 RnfH superfamily CS348_06370 IPR005346 RnfH protein CS348_06370 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CS348_06375 IPR007450 Lipoprotein SmpA/OmlA CS348_06375 IPR026592 Outer membrane protein assembly factor BamE CS348_06375 IPR037873 BamE-like CS348_06380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06380 IPR003395 RecF/RecN/SMC, N-terminal CS348_06380 IPR004604 DNA recombination/repair protein RecN CS348_06385 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CS348_06385 IPR002504 NAD kinase CS348_06385 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CS348_06385 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CS348_06395 IPR000740 GrpE nucleotide exchange factor CS348_06395 IPR013805 GrpE nucleotide exchange factor, coiled-coil CS348_06395 IPR009012 GrpE nucleotide exchange factor, head CS348_06405 IPR000644 CBS domain CS348_06405 IPR016169 FAD-binding, type PCMH, subdomain 2 CS348_06405 IPR036318 FAD-binding, type PCMH-like superfamily CS348_06405 IPR002550 CNNM, transmembrane domain CS348_06405 IPR005170 Transporter-associated domain CS348_06410 IPR002541 Cytochrome c assembly protein CS348_06420 IPR022941 Signal recognition particle, SRP54 subunit CS348_06420 IPR004780 Signal recognition particle protein CS348_06420 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CS348_06420 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CS348_06420 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CS348_06420 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CS348_06420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06420 IPR003593 AAA+ ATPase domain CS348_06420 IPR013822 Signal recognition particle SRP54, helical bundle CS348_06425 IPR000307 Ribosomal protein S16 CS348_06425 IPR023803 Ribosomal protein S16 domain superfamily CS348_06425 IPR020592 Ribosomal protein S16, conserved site CS348_06430 IPR027275 PRC-barrel domain CS348_06430 IPR011033 PRC-barrel-like superfamily CS348_06430 IPR002676 RimM, N-terminal CS348_06430 IPR036976 RimM, N-terminal domain superfamily CS348_06430 IPR009000 Translation protein, beta-barrel domain superfamily CS348_06430 IPR011961 16S rRNA processing protein RimM CS348_06435 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CS348_06435 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CS348_06435 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CS348_06435 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CS348_06435 IPR029028 Alpha/beta knot methyltransferases CS348_06440 IPR001857 Ribosomal protein L19 CS348_06440 IPR038657 Ribosomal protein L19 superfamily CS348_06440 IPR018257 Ribosomal protein L19, conserved site CS348_06440 IPR008991 Translation protein SH3-like domain superfamily CS348_06445 IPR033417 Periplasmic sensor domain CHASE8 CS348_06445 IPR000160 GGDEF domain CS348_06445 IPR003660 HAMP domain CS348_06445 IPR029787 Nucleotide cyclase CS348_06450 IPR025293 YfiR/HmsC-like CS348_06455 IPR013785 Aldolase-type TIM barrel CS348_06455 IPR006219 DHAP synthase, class 1 CS348_06455 IPR006218 DAHP synthetase I/KDSA CS348_06460 IPR036263 Chorismate mutase type II superfamily CS348_06460 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_06460 IPR003099 Prephenate dehydrogenase CS348_06460 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein CS348_06460 IPR036979 Chorismate mutase domain superfamily CS348_06460 IPR002701 Chorismate mutase II, prokaryotic-type CS348_06460 IPR036291 NAD(P)-binding domain superfamily CS348_06460 IPR011277 Chorismate mutase, T-protein CS348_06465 IPR005511 Senescence marker protein-30 (SMP-30) CS348_06465 IPR013658 SMP-30/Gluconolactonase/LRE-like region CS348_06465 IPR011042 Six-bladed beta-propeller, TolB-like CS348_06470 IPR002912 ACT domain CS348_06470 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CS348_06470 IPR036979 Chorismate mutase domain superfamily CS348_06470 IPR001086 Prephenate dehydratase CS348_06470 IPR018528 Prephenate dehydratase, conserved site CS348_06470 IPR036263 Chorismate mutase type II superfamily CS348_06470 IPR002701 Chorismate mutase II, prokaryotic-type CS348_06470 IPR010952 Chorismate mutase, gammaproteobacteria CS348_06475 IPR036567 Ribosome hibernation promotion factor-like CS348_06475 IPR003489 Ribosome hibernation promoting factor/RaiA CS348_06480 IPR039565 Outer membrane lipoprotein BamD-like CS348_06480 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_06480 IPR017689 Outer membrane protein assembly factor BamD CS348_06485 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_06485 IPR036986 RNA-binding S4 domain superfamily CS348_06485 IPR002942 RNA-binding S4 domain CS348_06485 IPR006225 Pseudouridine synthase, RluC/RluD CS348_06485 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CS348_06485 IPR006145 Pseudouridine synthase, RsuA/RluA CS348_06495 IPR041546 ClpA/ClpB, AAA lid domain CS348_06495 IPR001270 ClpA/B family CS348_06495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06495 IPR018368 ClpA/B, conserved site 1 CS348_06495 IPR036628 Clp, N-terminal domain superfamily CS348_06495 IPR028299 ClpA/B, conserved site 2 CS348_06495 IPR019489 Clp ATPase, C-terminal CS348_06495 IPR017730 Chaperonin ClpB CS348_06495 IPR003959 ATPase, AAA-type, core CS348_06495 IPR003593 AAA+ ATPase domain CS348_06495 IPR004176 Clp, N-terminal CS348_06525 IPR004736 MFS transporter, metabolite:H symporter CS348_06525 IPR005829 Sugar transporter, conserved site CS348_06525 IPR036259 MFS transporter superfamily CS348_06525 IPR005828 Major facilitator, sugar transporter-like CS348_06525 IPR020846 Major facilitator superfamily domain CS348_06530 IPR017028 Uncharacterised conserved protein UCP034456 CS348_06530 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein CS348_06535 IPR016270 CDP-alcohol phosphatidyltransferase class-II family CS348_06535 IPR001736 Phospholipase D/Transphosphatidylase CS348_06535 IPR025202 Phospholipase D-like domain CS348_06540 IPR016102 Succinyl-CoA synthetase-like CS348_06540 IPR013815 ATP-grasp fold, subdomain 1 CS348_06540 IPR000182 GNAT domain CS348_06540 IPR036291 NAD(P)-binding domain superfamily CS348_06540 IPR003781 CoA-binding CS348_06540 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CS348_06540 IPR016181 Acyl-CoA N-acyltransferase CS348_06540 IPR011761 ATP-grasp fold CS348_06550 IPR013766 Thioredoxin domain CS348_06550 IPR017937 Thioredoxin, conserved site CS348_06550 IPR036249 Thioredoxin-like superfamily CS348_06550 IPR005746 Thioredoxin CS348_06560 IPR029028 Alpha/beta knot methyltransferases CS348_06560 IPR004441 RNA methyltransferase TrmH family CS348_06560 IPR001537 tRNA/rRNA methyltransferase, SpoU type CS348_06560 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CS348_06560 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CS348_06560 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted CS348_06560 IPR029064 50S ribosomal protein L30e-like CS348_06565 IPR005122 Uracil-DNA glycosylase-like CS348_06565 IPR036895 Uracil-DNA glycosylase-like domain superfamily CS348_06565 IPR018085 Uracil-DNA glycosylase, active site CS348_06565 IPR002043 Uracil-DNA glycosylase family 1 CS348_06570 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CS348_06570 IPR001150 Glycine radical domain CS348_06570 IPR011140 Autonomous glycyl radical cofactor GrcA CS348_06575 IPR001123 Amino acid exporter protein, LeuE-type CS348_06580 IPR036390 Winged helix DNA-binding domain superfamily CS348_06580 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_06580 IPR000847 Transcription regulator HTH, LysR CS348_06580 IPR005119 LysR, substrate-binding CS348_06585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06585 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CS348_06585 IPR014014 RNA helicase, DEAD-box type, Q motif CS348_06585 IPR028621 ATP-dependent RNA helicase SrmB CS348_06585 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_06585 IPR011545 DEAD/DEAH box helicase domain CS348_06585 IPR001650 Helicase, C-terminal CS348_06590 IPR007848 Methyltransferase small domain CS348_06590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_06590 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_06590 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase CS348_06595 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_06595 IPR005288 L-aspartate oxidase CS348_06595 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CS348_06595 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CS348_06595 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CS348_06595 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CS348_06605 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CS348_06605 IPR007627 RNA polymerase sigma-70 region 2 CS348_06605 IPR013324 RNA polymerase sigma factor, region 3/4-like CS348_06605 IPR039425 RNA polymerase sigma-70 like CS348_06605 IPR014286 RNA polymerase sigma-70 RpoE type CS348_06605 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CS348_06605 IPR013325 RNA polymerase sigma factor, region 2 CS348_06605 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_06605 IPR014284 RNA polymerase sigma-70 like domain CS348_06610 IPR005573 Anti sigma-E protein RseA, C-terminal CS348_06610 IPR005572 Anti sigma-E protein RseA, N-terminal CS348_06610 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily CS348_06610 IPR026279 Sigma-E factor negative regulatory protein RseA CS348_06615 IPR005588 MucB/RseB CS348_06615 IPR033434 MucB/RseB, N-terminal CS348_06615 IPR033436 MucB/RseB, C-terminal CS348_06615 IPR038484 MucB/RseB, C-terminal domain superfamily CS348_06620 IPR007359 Positive regulator of sigma(E), RseC/MucC CS348_06620 IPR026268 Protein RseC CS348_06630 IPR038363 LepA, C-terminal domain superfamily CS348_06630 IPR004161 Translation elongation factor EFTu-like, domain 2 CS348_06630 IPR031157 Tr-type G domain, conserved site CS348_06630 IPR013842 GTP-binding protein LepA, C-terminal CS348_06630 IPR000640 Elongation factor EFG, domain V-like CS348_06630 IPR035654 Elongation factor 4, domain IV CS348_06630 IPR006297 Elongation factor 4 CS348_06630 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06630 IPR005225 Small GTP-binding protein domain CS348_06630 IPR000795 Transcription factor, GTP-binding domain CS348_06630 IPR035647 EF-G domain III/V-like CS348_06635 IPR000223 Peptidase S26A, signal peptidase I CS348_06635 IPR019758 Peptidase S26A, signal peptidase I, conserved site CS348_06635 IPR036286 LexA/Signal peptidase-like superfamily CS348_06635 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CS348_06635 IPR019756 Peptidase S26A, signal peptidase I, serine active site CS348_06635 IPR019533 Peptidase S26 CS348_06645 IPR000999 Ribonuclease III domain CS348_06645 IPR036389 Ribonuclease III, endonuclease domain superfamily CS348_06645 IPR011907 Ribonuclease III CS348_06645 IPR014720 Double-stranded RNA-binding domain CS348_06650 IPR009019 K homology domain superfamily, prokaryotic type CS348_06650 IPR005225 Small GTP-binding protein domain CS348_06650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06650 IPR005662 GTP-binding protein Era CS348_06650 IPR030388 Era-type guanine nucleotide-binding (G) domain CS348_06650 IPR004044 K Homology domain, type 2 CS348_06650 IPR015946 K homology domain-like, alpha/beta CS348_06650 IPR006073 GTP binding domain CS348_06655 IPR022572 DNA replication/recombination mediator RecO, N-terminal CS348_06655 IPR037278 ARFGAP/RecO-like zinc finger CS348_06655 IPR012340 Nucleic acid-binding, OB-fold CS348_06655 IPR003717 Recombination protein O, RecO CS348_06660 IPR036130 Pyridoxine 5'-phosphate synthase CS348_06660 IPR013785 Aldolase-type TIM barrel CS348_06660 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CS348_06665 IPR004568 Phosphopantetheine-protein transferase domain CS348_06665 IPR002582 Holo-[acyl carrier protein] synthase CS348_06665 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CS348_06665 IPR008278 4'-phosphopantetheinyl transferase domain CS348_06670 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_06670 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_06675 IPR000847 Transcription regulator HTH, LysR CS348_06675 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_06675 IPR036390 Winged helix DNA-binding domain superfamily CS348_06675 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain CS348_06675 IPR005119 LysR, substrate-binding CS348_06680 IPR026355 Oxalate/formate antiporter CS348_06680 IPR020846 Major facilitator superfamily domain CS348_06680 IPR011701 Major facilitator superfamily CS348_06680 IPR036259 MFS transporter superfamily CS348_06680 IPR004741 Oxalate/formate antiporter family transporter CS348_06685 IPR036291 NAD(P)-binding domain superfamily CS348_06685 IPR013332 Ketopantoate reductase, N-terminal domain CS348_06685 IPR013752 Ketopantoate reductase, C-terminal domain CS348_06685 IPR003710 Ketopantoate reductase ApbA/PanE CS348_06685 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_06685 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_06690 IPR009057 Homeobox-like domain superfamily CS348_06690 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_06690 IPR000281 Helix-turn-helix protein RpiR CS348_06690 IPR035472 RpiR-like, SIS domain CS348_06690 IPR001347 Sugar isomerase (SIS) CS348_06695 IPR001347 Sugar isomerase (SIS) CS348_06695 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein CS348_06695 IPR005486 Glucokinase regulatory protein, conserved site CS348_06695 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ CS348_06700 IPR036878 Glucose permease domain IIB CS348_06700 IPR003352 Phosphotransferase system, EIIC CS348_06700 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CS348_06700 IPR013013 Phosphotransferase system, EIIC component, type 1 CS348_06700 IPR001996 Phosphotransferase system, IIB component, type 1 CS348_06705 IPR036412 HAD-like superfamily CS348_06705 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB CS348_06705 IPR023214 HAD superfamily CS348_06710 IPR016192 APOBEC/CMP deaminase, zinc-binding CS348_06710 IPR002125 Cytidine and deoxycytidylate deaminase domain CS348_06710 IPR016193 Cytidine deaminase-like CS348_06710 IPR028883 tRNA-specific adenosine deaminase CS348_06715 IPR023703 Membrane-bound lytic murein transglycosylase F CS348_06715 IPR023346 Lysozyme-like domain superfamily CS348_06715 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CS348_06715 IPR000189 Prokaryotic transglycosylase, active site CS348_06715 IPR008258 Transglycosylase SLT domain 1 CS348_06725 IPR017926 Glutamine amidotransferase CS348_06725 IPR010918 PurM-like, C-terminal domain CS348_06725 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CS348_06725 IPR036921 PurM-like, N-terminal domain superfamily CS348_06725 IPR029062 Class I glutamine amidotransferase-like CS348_06725 IPR036676 PurM-like, C-terminal domain superfamily CS348_06725 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal CS348_06725 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily CS348_06725 IPR010073 Phosphoribosylformylglycinamidine synthase PurL CS348_06730 IPR003594 Histidine kinase/HSP90-like ATPase CS348_06730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_06730 IPR005467 Histidine kinase domain CS348_06730 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_06730 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_06730 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_06735 IPR025262 Quorum-sensing regulator protein G CS348_06740 IPR003593 AAA+ ATPase domain CS348_06740 IPR025944 Sigma-54 interaction domain, conserved site CS348_06740 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CS348_06740 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CS348_06740 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_06740 IPR001789 Signal transduction response regulator, receiver domain CS348_06740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06740 IPR011006 CheY-like superfamily CS348_06740 IPR009057 Homeobox-like domain superfamily CS348_06745 IPR011322 Nitrogen regulatory PII-like, alpha/beta CS348_06745 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CS348_06745 IPR017918 Nitrogen regulatory protein PII, conserved site CS348_06745 IPR002332 Nitrogen regulatory protein P-II, urydylation site CS348_06745 IPR002187 Nitrogen regulatory protein PII CS348_06750 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CS348_06750 IPR000109 Proton-dependent oligopeptide transporter family CS348_06750 IPR005279 Dipeptide/tripeptide permease CS348_06750 IPR020846 Major facilitator superfamily domain CS348_06750 IPR036259 MFS transporter superfamily CS348_06755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_06755 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CS348_06755 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CS348_06755 IPR000310 Orn/Lys/Arg decarboxylase, major domain CS348_06755 IPR011193 Ornithine/lysine/arginine decarboxylase CS348_06755 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CS348_06755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_06755 IPR015424 Pyridoxal phosphate-dependent transferase CS348_06760 IPR004754 Amino acid antiporter CS348_06760 IPR002293 Amino acid/polyamine transporter I CS348_06765 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_06765 IPR040970 CadC C-terminal domain 1 CS348_06765 IPR039420 Transcriptional regulatory protein WalR-like CS348_06765 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_06765 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_06765 IPR016032 Signal transduction response regulator, C-terminal effector CS348_06770 IPR023950 Flavohemoprotein CS348_06770 IPR012292 Globin/Protoglobin CS348_06770 IPR009050 Globin-like superfamily CS348_06770 IPR000971 Globin CS348_06770 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CS348_06770 IPR017927 FAD-binding domain, ferredoxin reductase-type CS348_06770 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CS348_06770 IPR001433 Oxidoreductase FAD/NAD(P)-binding CS348_06770 IPR017938 Riboflavin synthase-like beta-barrel CS348_06775 IPR039429 Serine hydroxymethyltransferase-like domain CS348_06775 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CS348_06775 IPR001085 Serine hydroxymethyltransferase CS348_06775 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_06775 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_06775 IPR015424 Pyridoxal phosphate-dependent transferase CS348_06780 IPR036259 MFS transporter superfamily CS348_06780 IPR024989 Major facilitator superfamily associated domain CS348_06780 IPR026032 Probable 3-phenylpropionic acid transporter CS348_06785 IPR036634 PRD domain superfamily CS348_06785 IPR011608 PRD domain CS348_06795 IPR011541 Nickel/cobalt transporter, high-affinity CS348_06800 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_06800 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_06800 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CS348_06800 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CS348_06800 IPR014261 Sulphite reductase, subunit C CS348_06800 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CS348_06800 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CS348_06805 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CS348_06805 IPR017938 Riboflavin synthase-like beta-barrel CS348_06805 IPR001433 Oxidoreductase FAD/NAD(P)-binding CS348_06805 IPR017927 FAD-binding domain, ferredoxin reductase-type CS348_06805 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit CS348_06805 IPR014260 Sulphite reductase, subunit B CS348_06805 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CS348_06810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_06810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_06810 IPR009051 Alpha-helical ferredoxin CS348_06810 IPR014259 Sulphite reductase, subunit A CS348_06815 IPR022742 Serine aminopeptidase, S33 CS348_06815 IPR029058 Alpha/Beta hydrolase fold CS348_06820 IPR033942 Inositol monophosphatase CS348_06820 IPR000760 Inositol monophosphatase-like CS348_06820 IPR022337 Inositol monophosphatase, SuhB CS348_06820 IPR020550 Inositol monophosphatase, conserved site CS348_06820 IPR020583 Inositol monophosphatase, metal-binding site CS348_06825 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CS348_06825 IPR004384 RNA methyltransferase TrmJ/LasT CS348_06825 IPR001537 tRNA/rRNA methyltransferase, SpoU type CS348_06825 IPR029028 Alpha/beta knot methyltransferases CS348_06830 IPR036390 Winged helix DNA-binding domain superfamily CS348_06830 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_06830 IPR000944 Transcription regulator Rrf2-type CS348_06830 IPR010242 Transcription factor HTH, IscR CS348_06830 IPR030489 Transcription regulator Rrf2-type, conserved site CS348_06835 IPR016454 Cysteine desulfurase CS348_06835 IPR010240 Cysteine desulfurase IscS CS348_06835 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_06835 IPR015424 Pyridoxal phosphate-dependent transferase CS348_06835 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_06835 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CS348_06835 IPR000192 Aminotransferase class V domain CS348_06840 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CS348_06840 IPR011339 ISC system FeS cluster assembly, IscU scaffold CS348_06845 IPR000361 FeS cluster biogenesis CS348_06845 IPR011302 Iron-binding protein IscA, proteobacteria CS348_06845 IPR035903 HesB-like domain superfamily CS348_06845 IPR017870 FeS cluster insertion, C-terminal, conserved site CS348_06845 IPR016092 FeS cluster insertion protein CS348_06850 IPR036869 Chaperone J-domain superfamily CS348_06850 IPR001623 DnaJ domain CS348_06850 IPR036386 HscB, C-terminal domain superfamily CS348_06850 IPR004640 Co-chaperone Hsc20 CS348_06850 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain CS348_06855 IPR010236 ISC system FeS cluster assembly, HscA chaperone CS348_06855 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CS348_06855 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CS348_06855 IPR042039 HscA chaperone, nucleotide-binding domain CS348_06855 IPR013126 Heat shock protein 70 family CS348_06855 IPR018181 Heat shock protein 70, conserved site CS348_06860 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria CS348_06860 IPR012675 Beta-grasp domain superfamily CS348_06860 IPR018298 Adrenodoxin, iron-sulphur binding site CS348_06860 IPR001055 Adrenodoxin CS348_06860 IPR036010 2Fe-2S ferredoxin-like superfamily CS348_06860 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CS348_06865 IPR007479 ISC system FeS cluster assembly, IscX CS348_06865 IPR036762 IscX-like superfamily CS348_06870 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CS348_06870 IPR008330 Peptidase M17, peptidase B CS348_06870 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CS348_06870 IPR001346 Interferon regulatory factor DNA-binding domain CS348_06875 IPR009839 SseB protein N-terminal domain CS348_06875 IPR027945 SseB protein, C-terminal CS348_06890 IPR036873 Rhodanese-like domain superfamily CS348_06890 IPR001307 Thiosulphate sulfurtransferase, conserved site CS348_06890 IPR001763 Rhodanese-like domain CS348_06895 IPR011625 Alpha-2-macroglobulin, bait region domain CS348_06895 IPR021868 Alpha-2-macroglobulin MG3 domain CS348_06895 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain CS348_06895 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain CS348_06895 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain CS348_06895 IPR001599 Alpha-2-macroglobulin CS348_06895 IPR002890 Macroglobulin domain CS348_06895 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CS348_06895 IPR026284 Alpha-2-macroglobulin, bacteria CS348_06895 IPR011626 Alpha-macroglobulin-like, TED domain CS348_06895 IPR040639 Alpha-2-macroglobulin, MG1 domain CS348_06900 IPR036950 Penicillin binding protein transglycosylase domain CS348_06900 IPR012338 Beta-lactamase/transpeptidase-like CS348_06900 IPR001264 Glycosyl transferase, family 51 CS348_06900 IPR023346 Lysozyme-like domain superfamily CS348_06900 IPR011815 Penicillin-binding protein 1C CS348_06900 IPR009647 Penicillin-binding, C-terminal CS348_06900 IPR001460 Penicillin-binding protein, transpeptidase CS348_06905 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_06905 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_06905 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_06905 IPR006656 Molybdopterin oxidoreductase CS348_06905 IPR006657 Molybdopterin dinucleotide-binding domain CS348_06905 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_06905 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_06905 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CS348_06905 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_06910 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_06910 IPR014297 Dimethylsulphoxide reductase, chain B CS348_06910 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_06925 IPR034907 Nucleoside diphosphate kinase-like domain CS348_06925 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CS348_06925 IPR001564 Nucleoside diphosphate kinase CS348_06925 IPR023005 Nucleoside diphosphate kinase, active site CS348_06930 IPR013785 Aldolase-type TIM barrel CS348_06930 IPR040072 Methyltransferase (Class A) CS348_06930 IPR007197 Radical SAM CS348_06930 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CS348_06930 IPR027492 Dual-specificity RNA methyltransferase RlmN CS348_06940 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_06940 IPR001387 Cro/C1-type helix-turn-helix domain CS348_06940 IPR023690 Cytoskeleton protein RodZ CS348_06940 IPR025194 Domain of unknown function DUF4115 CS348_06945 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CS348_06945 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CS348_06945 IPR011005 Dihydropteroate synthase-like CS348_06950 IPR015807 Histidine-tRNA ligase CS348_06950 IPR006195 Aminoacyl-tRNA synthetase, class II CS348_06950 IPR004154 Anticodon-binding CS348_06950 IPR036621 Anticodon-binding domain superfamily CS348_06950 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CS348_06950 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CS348_06950 IPR033656 Histidyl-anticodon-binding CS348_06955 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_06955 IPR018704 Tetratricopeptide repeat-like domain CS348_06955 IPR026039 Uncharacterised protein family UPF0070 CS348_06960 IPR017687 Outer membrane protein assembly factor BamB CS348_06960 IPR002372 Pyrrolo-quinoline quinone repeat CS348_06960 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CS348_06960 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CS348_06960 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CS348_06965 IPR015946 K homology domain-like, alpha/beta CS348_06965 IPR006073 GTP binding domain CS348_06965 IPR016484 GTP-binding protein EngA CS348_06965 IPR031166 EngA-type guanine nucleotide-binding (G) domain CS348_06965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_06965 IPR005225 Small GTP-binding protein domain CS348_06965 IPR032859 GTPase Der, C-terminal KH-domain-like CS348_06970 IPR029037 YfgJ-like CS348_06970 IPR010807 Protein of unknown function DUF1407 CS348_06975 IPR018392 LysM domain CS348_06975 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CS348_06975 IPR003343 Bacterial Ig-like, group 2 CS348_06975 IPR016186 C-type lectin-like/link domain superfamily CS348_06975 IPR016187 C-type lectin fold CS348_06975 IPR038177 Inverse autotransporter, beta-domain superfamily CS348_06975 IPR008964 Invasin/intimin cell-adhesion fragments CS348_06975 IPR013783 Immunoglobulin-like fold CS348_06975 IPR003535 Intimin/invasin bacterial adhesion mediator protein CS348_06975 IPR013117 Intimin, C-terminal CS348_06975 IPR024519 Inverse autotransporter, beta-domain CS348_06995 IPR005063 Transposase, IS1 CS348_07000 IPR005546 Autotransporter beta-domain CS348_07000 IPR036709 Autotransporter beta-domain superfamily CS348_07000 IPR006315 Outer membrane autotransporter barrel CS348_07000 IPR011050 Pectin lyase fold/virulence factor CS348_07005 IPR020579 Exonuclease VII, large subunit, C-terminal CS348_07005 IPR003753 Exonuclease VII, large subunit CS348_07005 IPR025824 OB-fold nucleic acid binding domain CS348_07010 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CS348_07010 IPR013785 Aldolase-type TIM barrel CS348_07010 IPR005990 Inosine-5'-monophosphate dehydrogenase CS348_07010 IPR000644 CBS domain CS348_07010 IPR001093 IMP dehydrogenase/GMP reductase CS348_07015 IPR017926 Glutamine amidotransferase CS348_07015 IPR004739 GMP synthase, glutamine amidotransferase CS348_07015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_07015 IPR001674 GMP synthase, C-terminal CS348_07015 IPR025777 GMP synthetase ATP pyrophosphatase domain CS348_07015 IPR029062 Class I glutamine amidotransferase-like CS348_07015 IPR022310 NAD/GMP synthase CS348_07015 IPR022955 GMP synthase CS348_07035 IPR020231 Uncharacterised protein family, YfgI CS348_07040 IPR008816 Glycine zipper 2TM domain CS348_07045 IPR022576 Protein of unknown function DUF2633 CS348_07055 IPR001633 EAL domain CS348_07055 IPR035919 EAL domain superfamily CS348_07055 IPR007895 MASE1 CS348_07055 IPR000160 GGDEF domain CS348_07060 IPR003695 Ppx/GppA phosphatase CS348_07060 IPR030673 Pyrophosphatase, GppA/Ppx-type CS348_07060 IPR022371 Exopolyphosphatase CS348_07065 IPR025200 Polyphosphate kinase C-terminal domain 2 CS348_07065 IPR036830 Polyphosphate kinase middle domain superfamily CS348_07065 IPR024953 Polyphosphate kinase middle domain CS348_07065 IPR041108 Polyphosphate kinase, C-terminal domain 1 CS348_07065 IPR001736 Phospholipase D/Transphosphatidylase CS348_07065 IPR003414 Polyphosphate kinase CS348_07065 IPR036832 Polyphosphate kinase N-terminal domain superfamily CS348_07065 IPR025198 Polyphosphate kinase N-terminal domain CS348_07070 IPR036477 Formyl transferase, N-terminal domain superfamily CS348_07070 IPR004607 Phosphoribosylglycinamide formyltransferase CS348_07070 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CS348_07070 IPR002376 Formyl transferase, N-terminal CS348_07075 IPR036676 PurM-like, C-terminal domain superfamily CS348_07075 IPR036921 PurM-like, N-terminal domain superfamily CS348_07075 IPR016188 PurM-like, N-terminal domain CS348_07075 IPR010918 PurM-like, C-terminal domain CS348_07075 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CS348_07080 IPR005765 Uracil phosphoribosyl transferase CS348_07080 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CS348_07080 IPR029057 Phosphoribosyltransferase-like CS348_07080 IPR000836 Phosphoribosyltransferase domain CS348_07085 IPR029935 Uracil permease CS348_07085 IPR006042 Xanthine/uracil permease CS348_07085 IPR006043 Xanthine/uracil/vitamin C permease CS348_07090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_07090 IPR017788 DnaA regulatory inactivator Hda CS348_07090 IPR013317 Chromosomal replication initiator protein DnaA CS348_07090 IPR020591 Chromosomal replication control, initiator DnaA-like CS348_07090 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae CS348_07095 IPR006660 Arsenate reductase-like CS348_07095 IPR036249 Thioredoxin-like superfamily CS348_07095 IPR006659 Arsenate reductase CS348_07100 IPR030873 Beta-barrel assembly-enhancing protease CS348_07100 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_07100 IPR001915 Peptidase M48 CS348_07105 IPR002549 Transmembrane protein TqsA-like CS348_07110 IPR041522 CdaR, GGDEF-like domain CS348_07110 IPR008599 Putative sugar diacid recognition CS348_07110 IPR025736 PucR C-terminal helix-turn-helix domain CS348_07110 IPR042070 PucR C-terminal helix-turn-helix domain superfamily CS348_07115 IPR003474 Gluconate transporter CS348_07120 IPR018193 Glycerate kinase, flavodoxin-like fold CS348_07120 IPR004381 Glycerate kinase CS348_07120 IPR018197 Glycerate kinase, restriction-enzyme-like fold CS348_07120 IPR036129 Glycerate kinase superfamily CS348_07125 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CS348_07125 IPR013766 Thioredoxin domain CS348_07125 IPR036249 Thioredoxin-like superfamily CS348_07125 IPR024706 Peroxiredoxin, AhpC-type CS348_07130 IPR002912 ACT domain CS348_07130 IPR016867 Glycine cleavage system transcriptional repressor CS348_07135 IPR013785 Aldolase-type TIM barrel CS348_07135 IPR020624 Schiff base-forming aldolase, conserved site CS348_07135 IPR020625 Schiff base-forming aldolase, active site CS348_07135 IPR002220 DapA-like CS348_07135 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CS348_07140 IPR010653 NlpB/DapX lipoprotein CS348_07140 IPR042268 Outer membrane protein assembly factor BamC, C-terminal CS348_07140 IPR014524 Outer membrane protein assembly factor BamC CS348_07145 IPR018236 SAICAR synthetase, conserved site CS348_07145 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CS348_07145 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase CS348_07145 IPR028923 SAICAR synthetase/ADE2, N-terminal CS348_07150 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CS348_07155 IPR016181 Acyl-CoA N-acyltransferase CS348_07155 IPR038321 TmcA, C-terminal domain superfamily CS348_07155 IPR032672 TmcA/NAT10/Kre33 CS348_07155 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA CS348_07155 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain CS348_07155 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_07155 IPR007807 Helicase domain CS348_07155 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal CS348_07155 IPR000182 GNAT domain CS348_07160 IPR020910 Uncharacterised protein family UPF0370 CS348_07165 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CS348_07165 IPR036264 Bacterial exopeptidase dimerisation domain CS348_07165 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CS348_07165 IPR002933 Peptidase M20 CS348_07165 IPR011650 Peptidase M20, dimerisation domain CS348_07170 IPR006660 Arsenate reductase-like CS348_07170 IPR006504 Transcriptional regulator Spx/MgsR CS348_07170 IPR036249 Thioredoxin-like superfamily CS348_07175 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CS348_07175 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CS348_07175 IPR001036 Acriflavin resistance protein CS348_07180 IPR029095 NarX-like, N-terminal CS348_07180 IPR042295 NarX-like, N-terminal domain superfamily CS348_07180 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing CS348_07180 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CS348_07180 IPR005467 Histidine kinase domain CS348_07180 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_07180 IPR003594 Histidine kinase/HSP90-like ATPase CS348_07180 IPR003660 HAMP domain CS348_07185 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_07185 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_07185 IPR028261 Dihydroprymidine dehydrogenase domain II CS348_07185 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_07185 IPR009051 Alpha-helical ferredoxin CS348_07185 IPR023753 FAD/NAD(P)-binding domain CS348_07185 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 CS348_07190 IPR001466 Beta-lactamase-related CS348_07190 IPR012338 Beta-lactamase/transpeptidase-like CS348_07190 IPR022849 Peptidase S12, YfeW/YbbE-like CS348_07195 IPR000086 NUDIX hydrolase domain CS348_07195 IPR004385 Nucleoside diphosphate pyrophosphatase CS348_07195 IPR015797 NUDIX hydrolase-like domain superfamily CS348_07200 IPR009560 Protein of unknown function DUF1176 CS348_07210 IPR020826 Transketolase binding site CS348_07210 IPR005478 Transketolase, bacterial-like CS348_07210 IPR005475 Transketolase-like, pyrimidine-binding domain CS348_07210 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CS348_07210 IPR029061 Thiamin diphosphate-binding fold CS348_07210 IPR005474 Transketolase, N-terminal CS348_07210 IPR033247 Transketolase family CS348_07210 IPR033248 Transketolase, C-terminal domain CS348_07215 IPR018225 Transaldolase, active site CS348_07215 IPR013785 Aldolase-type TIM barrel CS348_07215 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CS348_07215 IPR004730 Transaldolase type 1 CS348_07225 IPR042112 Phosphate acetyltransferase, domain 2 CS348_07225 IPR002505 Phosphate acetyl/butaryl transferase CS348_07225 IPR037062 Malic enzyme, N-terminal domain superfamily CS348_07225 IPR012302 Malic enzyme, NAD-binding CS348_07225 IPR042113 Phosphate acetyltransferase, domain 1 CS348_07225 IPR012301 Malic enzyme, N-terminal domain CS348_07225 IPR015884 Malic enzyme, conserved site CS348_07225 IPR012188 NAD(P)-dependent malic enzyme CS348_07225 IPR036291 NAD(P)-binding domain superfamily CS348_07230 IPR037233 CcmK-like superfamily CS348_07230 IPR009307 Ethanolamine utilisation EutS CS348_07230 IPR000249 Microcompartment protein, bacteria CS348_07235 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV CS348_07235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_07240 IPR011051 RmlC-like cupin domain superfamily CS348_07240 IPR014710 RmlC-like jelly roll fold CS348_07240 IPR010424 Ethanolamine utilisation EutQ CS348_07245 IPR016030 Cobalamin adenosyltransferase-like CS348_07245 IPR036451 Cobalamin adenosyltransferase-like superfamily CS348_07245 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type CS348_07250 IPR012147 Phosphate acetyl/butyryltransferase CS348_07250 IPR042113 Phosphate acetyltransferase, domain 1 CS348_07250 IPR042112 Phosphate acetyltransferase, domain 2 CS348_07250 IPR002505 Phosphate acetyl/butaryl transferase CS348_07250 IPR004614 Phosphate acetyltransferase CS348_07255 IPR000249 Microcompartment protein, bacteria CS348_07255 IPR037233 CcmK-like superfamily CS348_07255 IPR020808 Bacterial microcompartments protein, conserved site CS348_07260 IPR036677 EutN/Ccml superfamily CS348_07260 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CS348_07265 IPR015590 Aldehyde dehydrogenase domain CS348_07265 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_07265 IPR016161 Aldehyde/histidinol dehydrogenase CS348_07265 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CS348_07265 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_07270 IPR013366 Ethanolamine utilisation EutJ CS348_07275 IPR039697 Iron-type alcohol dehydrogenase-like CS348_07275 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CS348_07275 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CS348_07280 IPR007441 Ethanolamine utilisation protein EutH CS348_07285 IPR009377 Ethanolamine utilisation EutA CS348_07290 IPR013785 Aldolase-type TIM barrel CS348_07290 IPR010628 Ethanolamine ammonia lyase large subunit CS348_07295 IPR009246 Ethanolamine ammonia-lyase light chain CS348_07295 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal CS348_07295 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal CS348_07300 IPR030983 Ethanolamine utilization protein EutL CS348_07300 IPR009193 Polyhedral organelle shell protein, EutL/PduB type CS348_07300 IPR037233 CcmK-like superfamily CS348_07300 IPR000249 Microcompartment protein, bacteria CS348_07305 IPR032298 Ethanolamine utilization protein EutK, C-terminal CS348_07305 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_07305 IPR020808 Bacterial microcompartments protein, conserved site CS348_07305 IPR000249 Microcompartment protein, bacteria CS348_07305 IPR037233 CcmK-like superfamily CS348_07310 IPR018060 DNA binding HTH domain, AraC-type CS348_07310 IPR018062 HTH domain AraC-type, conserved site CS348_07310 IPR009057 Homeobox-like domain superfamily CS348_07315 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily CS348_07315 IPR001260 Coproporphyrinogen III oxidase, aerobic CS348_07315 IPR018375 Coproporphyrinogen III oxidase, conserved site CS348_07320 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CS348_07325 IPR000182 GNAT domain CS348_07325 IPR016181 Acyl-CoA N-acyltransferase CS348_07325 IPR017255 Acetyltransferase, GNAT, predicted CS348_07325 IPR023072 Acetyltransferase, YpeA CS348_07330 IPR021318 Protein of unknown function DUF2919 CS348_07335 IPR038714 YfeY-like superfamily CS348_07335 IPR010938 Protein of unknown function DUF1131 CS348_07340 IPR006314 Dyp-type peroxidase CS348_07340 IPR011008 Dimeric alpha-beta barrel CS348_07345 IPR036291 NAD(P)-binding domain superfamily CS348_07345 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_07350 IPR000957 Sulphate/thiosulphate-binding, conserved site CS348_07350 IPR034408 Sulphate/thiosulphate-binding site CS348_07350 IPR005669 Thiosulphate/Sulfate-binding protein CS348_07355 IPR005667 Sulphate ABC transporter permease protein 2 CS348_07355 IPR035906 MetI-like superfamily CS348_07355 IPR011865 Sulphate ABC transporter, permease protein CysT CS348_07355 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_07360 IPR005667 Sulphate ABC transporter permease protein 2 CS348_07360 IPR035906 MetI-like superfamily CS348_07360 IPR011866 Sulphate ABC transporter, permease protein CysW CS348_07360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_07365 IPR003439 ABC transporter-like CS348_07365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_07365 IPR017871 ABC transporter, conserved site CS348_07365 IPR003593 AAA+ ATPase domain CS348_07365 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CS348_07365 IPR005666 Sulphate transport system permease protein 1 CS348_07365 IPR008995 Molybdate/tungstate binding, C-terminal CS348_07370 IPR005856 Cysteine synthase CS348_07370 IPR005858 Cysteine synthase CysM CS348_07370 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CS348_07370 IPR001926 Pyridoxal-phosphate dependent enzyme CS348_07370 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CS348_07375 IPR035242 Protein of unknown function DUF5329 CS348_07380 IPR029062 Class I glutamine amidotransferase-like CS348_07380 IPR017926 Glutamine amidotransferase CS348_07385 IPR015424 Pyridoxal phosphate-dependent transferase CS348_07385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_07385 IPR036390 Winged helix DNA-binding domain superfamily CS348_07385 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_07385 IPR000524 Transcription regulator HTH, GntR CS348_07385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_07385 IPR004839 Aminotransferase, class I/classII CS348_07390 IPR029056 Ribokinase-like CS348_07390 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase CS348_07390 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CS348_07390 IPR004625 Pyridoxine kinase CS348_07400 IPR011055 Duplicated hybrid motif CS348_07400 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CS348_07405 IPR008731 Phosphotransferase system, enzyme I N-terminal CS348_07405 IPR036637 Phosphohistidine domain superfamily CS348_07405 IPR023151 PEP-utilising enzyme, conserved site CS348_07405 IPR036618 PtsI, HPr-binding domain superfamily CS348_07405 IPR008279 PEP-utilising enzyme, mobile domain CS348_07405 IPR000121 PEP-utilising enzyme, C-terminal CS348_07405 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_07405 IPR040442 Pyruvate kinase-like domain superfamily CS348_07405 IPR018274 PEP-utilising enzyme, active site CS348_07405 IPR006318 Phosphotransferase system, enzyme I-like CS348_07405 IPR024692 Phosphotransferase system, enzyme I CS348_07410 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CS348_07410 IPR000032 Phosphocarrier protein HPr-like CS348_07410 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CS348_07410 IPR035895 HPr-like superfamily CS348_07415 IPR005859 Cysteine synthase CysK CS348_07415 IPR005856 Cysteine synthase CS348_07415 IPR001926 Pyridoxal-phosphate dependent enzyme CS348_07415 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CS348_07415 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CS348_07425 IPR022985 Sulfate transporter CysZ CS348_07430 IPR007449 ZipA, C-terminal FtsZ-binding domain CS348_07430 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily CS348_07430 IPR011919 Cell division protein ZipA CS348_07435 IPR013839 NAD-dependent DNA ligase, adenylation CS348_07435 IPR033136 NAD-dependent DNA ligase, conserved site CS348_07435 IPR013840 NAD-dependent DNA ligase, N-terminal CS348_07435 IPR018239 NAD-dependent DNA ligase, active site CS348_07435 IPR041663 DisA/LigA, helix-hairpin-helix motif CS348_07435 IPR001357 BRCT domain CS348_07435 IPR001679 NAD-dependent DNA ligase CS348_07435 IPR010994 RuvA domain 2-like CS348_07435 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CS348_07435 IPR004150 NAD-dependent DNA ligase, OB-fold CS348_07435 IPR012340 Nucleic acid-binding, OB-fold CS348_07435 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CS348_07435 IPR036420 BRCT domain superfamily CS348_07440 IPR024530 Putative quorum-sensing-regulated virulence factor CS348_07445 IPR016833 Putative sodium bile acid cotransporter CS348_07445 IPR038770 Sodium/solute symporter superfamily CS348_07450 IPR036390 Winged helix DNA-binding domain superfamily CS348_07450 IPR000847 Transcription regulator HTH, LysR CS348_07450 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_07450 IPR005119 LysR, substrate-binding CS348_07455 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily CS348_07455 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like CS348_07460 IPR000845 Nucleoside phosphorylase domain CS348_07460 IPR010943 Xanthosine phosphorylase CS348_07460 IPR018099 Purine phosphorylase, family 2, conserved site CS348_07460 IPR011268 Purine nucleoside phosphorylase CS348_07460 IPR035994 Nucleoside phosphorylase superfamily CS348_07465 IPR036259 MFS transporter superfamily CS348_07465 IPR004740 Nucleoside:H+ symporter CS348_07465 IPR020846 Major facilitator superfamily domain CS348_07475 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain CS348_07475 IPR036390 Winged helix DNA-binding domain superfamily CS348_07475 IPR005119 LysR, substrate-binding CS348_07475 IPR000847 Transcription regulator HTH, LysR CS348_07475 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_07495 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CS348_07495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_07495 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CS348_07495 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CS348_07495 IPR033910 Glutamyl-tRNA synthetase CS348_07495 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CS348_07495 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CS348_07495 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CS348_07500 IPR009061 Putative DNA-binding domain superfamily CS348_07500 IPR010749 Protein of unknown function DUF1323 CS348_07500 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_07500 IPR001387 Cro/C1-type helix-turn-helix domain CS348_07505 IPR009061 Putative DNA-binding domain superfamily CS348_07505 IPR010749 Protein of unknown function DUF1323 CS348_07525 IPR001633 EAL domain CS348_07525 IPR029787 Nucleotide cyclase CS348_07525 IPR035919 EAL domain superfamily CS348_07525 IPR000160 GGDEF domain CS348_07525 IPR007895 MASE1 CS348_07530 IPR008276 Concentrative nucleoside transporter CS348_07530 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CS348_07530 IPR002668 Concentrative nucleoside transporter N-terminal domain CS348_07530 IPR011657 Concentrative nucleoside transporter C-terminal domain CS348_07530 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CS348_07535 IPR001046 NRAMP family CS348_07565 IPR018774 Bacteriophage Mu, GpT CS348_07585 IPR019638 Protein of unknown function DUF2502 CS348_07590 IPR023210 NADP-dependent oxidoreductase domain CS348_07590 IPR036812 NADP-dependent oxidoreductase domain superfamily CS348_07595 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CS348_07595 IPR000399 TPP-binding enzyme, conserved site CS348_07595 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme CS348_07595 IPR029061 Thiamin diphosphate-binding fold CS348_07595 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae CS348_07595 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CS348_07595 IPR029035 DHS-like NAD/FAD-binding domain superfamily CS348_07595 IPR012000 Thiamine pyrophosphate enzyme, central domain CS348_07600 IPR014743 Chloride channel, core CS348_07600 IPR022969 Chloride channel YfeO CS348_07600 IPR001807 Chloride channel, voltage gated CS348_07605 IPR003836 Glucokinase CS348_07610 IPR015424 Pyridoxal phosphate-dependent transferase CS348_07610 IPR004839 Aminotransferase, class I/classII CS348_07610 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_07610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_07615 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP CS348_07615 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CS348_07615 IPR004960 Bacterial lipid A biosynthesis acyltransferase CS348_07620 IPR024470 Protein of unknown function DUF2545 CS348_07630 IPR020846 Major facilitator superfamily domain CS348_07630 IPR011701 Major facilitator superfamily CS348_07630 IPR021159 Glycerate/sugar phosphate transporter, conserved site CS348_07630 IPR036259 MFS transporter superfamily CS348_07630 IPR005267 Glycerol-3-phosphate transporter CS348_07630 IPR000849 Sugar phosphate transporter CS348_07645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_07645 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_07645 IPR003660 HAMP domain CS348_07645 IPR017116 Signal transduction histidine kinase, PgtB CS348_07645 IPR003594 Histidine kinase/HSP90-like ATPase CS348_07645 IPR005467 Histidine kinase domain CS348_07645 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_07650 IPR001789 Signal transduction response regulator, receiver domain CS348_07650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_07650 IPR025944 Sigma-54 interaction domain, conserved site CS348_07650 IPR002197 DNA binding HTH domain, Fis-type CS348_07650 IPR009057 Homeobox-like domain superfamily CS348_07650 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_07650 IPR011006 CheY-like superfamily CS348_07655 IPR020080 Outer membrane adhesin/peptidase omptin CS348_07655 IPR020079 Peptidase A26, omptin, conserved site CS348_07655 IPR000036 Peptidase A26, omptin CS348_07665 IPR000292 Formate/nitrite transporter CS348_07665 IPR023271 Aquaporin-like CS348_07670 IPR007428 MlaA lipoprotein CS348_07675 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CS348_07675 IPR042117 OMPP1/FadL/TodX superfamily CS348_07685 IPR035571 UPF0234-like, C-terminal CS348_07685 IPR005272 Conserved hypothetical protein CHP00743 CS348_07690 IPR020613 Thiolase, conserved site CS348_07690 IPR020610 Thiolase, active site CS348_07690 IPR020615 Thiolase, acyl-enzyme intermediate active site CS348_07690 IPR016039 Thiolase-like CS348_07690 IPR012806 Acetyl-CoA C-acyltransferase FadI CS348_07690 IPR020616 Thiolase, N-terminal CS348_07690 IPR020617 Thiolase, C-terminal CS348_07690 IPR002155 Thiolase CS348_07695 IPR036291 NAD(P)-binding domain superfamily CS348_07695 IPR001753 Enoyl-CoA hydratase/isomerase CS348_07695 IPR029045 ClpP/crotonase-like domain superfamily CS348_07695 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_07695 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CS348_07695 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CS348_07695 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CS348_07695 IPR012802 Fatty oxidation complex, alpha subunit FadJ CS348_07700 IPR013078 Histidine phosphatase superfamily, clade-1 CS348_07700 IPR004449 Phosphohistidine phosphatase SixA CS348_07700 IPR029033 Histidine phosphatase superfamily CS348_07705 IPR002625 Smr domain CS348_07705 IPR036063 Smr domain superfamily CS348_07705 IPR022990 Uncharacterised protein family UPF0115 CS348_07710 IPR004556 Methyltransferase HemK-like CS348_07710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_07710 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase CS348_07710 IPR007848 Methyltransferase small domain CS348_07710 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_07715 IPR020541 Chorismate synthase, conserved site CS348_07715 IPR035904 Chorismate synthase AroC superfamily CS348_07715 IPR000453 Chorismate synthase CS348_07725 IPR002781 Transmembrane protein TauE-like CS348_07730 IPR007411 Elongation factor P hydroxylase CS348_07735 IPR014987 Uncharacterised protein family YfcL CS348_07740 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CS348_07740 IPR008471 MnmC-like methyltransferase CS348_07740 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_07740 IPR006076 FAD dependent oxidoreductase CS348_07740 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CS348_07745 IPR014030 Beta-ketoacyl synthase, N-terminal CS348_07745 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CS348_07745 IPR018201 Beta-ketoacyl synthase, active site CS348_07745 IPR000794 Beta-ketoacyl synthase CS348_07745 IPR014031 Beta-ketoacyl synthase, C-terminal CS348_07745 IPR016039 Thiolase-like CS348_07750 IPR003675 CAAX prenyl protease 2 CS348_07765 IPR038722 Ner, winged helix-turn-helix DNA-binding domain CS348_07765 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_07775 IPR037541 Uncharacterized MFS-type transporter YfcJ CS348_07775 IPR036259 MFS transporter superfamily CS348_07775 IPR011701 Major facilitator superfamily CS348_07775 IPR020846 Major facilitator superfamily domain CS348_07780 IPR023597 Flagellar regulator Flk CS348_07785 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CS348_07785 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS348_07785 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CS348_07785 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CS348_07785 IPR020921 Erythronate-4-phosphate dehydrogenase CS348_07785 IPR036291 NAD(P)-binding domain superfamily CS348_07785 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain CS348_07785 IPR038251 PdxB, dimerisation domain superfamily CS348_07790 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CS348_07790 IPR036291 NAD(P)-binding domain superfamily CS348_07790 IPR000534 Semialdehyde dehydrogenase, NAD-binding CS348_07795 IPR001406 Pseudouridine synthase I, TruA CS348_07795 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_07795 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CS348_07795 IPR020095 Pseudouridine synthase I, TruA, C-terminal CS348_07800 IPR032818 DedA family CS348_07800 IPR032816 SNARE associated Golgi protein CS348_07805 IPR041010 Acetyl-coA carboxylase zinc finger domain CS348_07805 IPR029045 ClpP/crotonase-like domain superfamily CS348_07805 IPR034733 Acetyl-CoA carboxylase CS348_07805 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CS348_07805 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CS348_07810 IPR001645 Folylpolyglutamate synthetase CS348_07810 IPR036565 Mur-like, catalytic domain superfamily CS348_07810 IPR004101 Mur ligase, C-terminal CS348_07810 IPR036615 Mur ligase, C-terminal domain superfamily CS348_07810 IPR013221 Mur ligase, central CS348_07810 IPR018109 Folylpolyglutamate synthetase, conserved site CS348_07815 IPR032898 Cell division protein DedD CS348_07815 IPR036680 Sporulation-like domain superfamily CS348_07815 IPR007730 Sporulation-like domain CS348_07820 IPR003825 Colicin V production, CvpA CS348_07825 IPR035584 Amidophosphoribosyltransferase, N-terminal CS348_07825 IPR005854 Amidophosphoribosyltransferase CS348_07825 IPR000836 Phosphoribosyltransferase domain CS348_07825 IPR017932 Glutamine amidotransferase type 2 domain CS348_07825 IPR029055 Nucleophile aminohydrolases, N-terminal CS348_07825 IPR029057 Phosphoribosyltransferase-like CS348_07840 IPR002293 Amino acid/polyamine transporter I CS348_07845 IPR029066 PLP-binding barrel CS348_07845 IPR001608 Alanine racemase, N-terminal CS348_07850 IPR004840 Amino acid permease, conserved site CS348_07850 IPR004841 Amino acid permease/ SLC12A domain CS348_07855 IPR004507 Flavin prenyltransferase UbiX-like CS348_07855 IPR036551 Flavin prenyltransferase-like CS348_07855 IPR003382 Flavoprotein CS348_07865 IPR018313 Solute-binding protein family 3, conserved site CS348_07865 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CS348_07865 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CS348_07870 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CS348_07870 IPR018313 Solute-binding protein family 3, conserved site CS348_07870 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CS348_07875 IPR035906 MetI-like superfamily CS348_07875 IPR030199 Histidine transport system permease protein HisQ CS348_07875 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CS348_07875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_07880 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CS348_07880 IPR035906 MetI-like superfamily CS348_07880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_07885 IPR017871 ABC transporter, conserved site CS348_07885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_07885 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CS348_07885 IPR003593 AAA+ ATPase domain CS348_07885 IPR003439 ABC transporter-like CS348_07890 IPR036291 NAD(P)-binding domain superfamily CS348_07890 IPR001509 NAD-dependent epimerase/dehydratase CS348_07890 IPR013549 Domain of unknown function DUF1731 CS348_07890 IPR010099 Epimerase family protein SDR39U1 CS348_07895 IPR010987 Glutathione S-transferase, C-terminal-like CS348_07895 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CS348_07895 IPR004045 Glutathione S-transferase, N-terminal CS348_07895 IPR004046 Glutathione S-transferase, C-terminal CS348_07895 IPR036249 Thioredoxin-like superfamily CS348_07900 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal CS348_07900 IPR010987 Glutathione S-transferase, C-terminal-like CS348_07900 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CS348_07900 IPR004045 Glutathione S-transferase, N-terminal CS348_07900 IPR040079 Glutathione Transferase family CS348_07900 IPR036249 Thioredoxin-like superfamily CS348_07905 IPR000979 Phosphodiesterase MJ0936/Vps29 CS348_07905 IPR029052 Metallo-dependent phosphatase-like CS348_07905 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type CS348_07905 IPR020935 Phosphodiesterase YfcE, conserved site CS348_07905 IPR041802 YfcE-like, metallophosphatase domain CS348_07910 IPR024195 NUDIX hydrolase, YfcD, predicted CS348_07910 IPR015797 NUDIX hydrolase-like domain superfamily CS348_07910 IPR000086 NUDIX hydrolase domain CS348_07915 IPR000843 LacI-type HTH domain CS348_07915 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_07915 IPR028082 Periplasmic binding protein-like I CS348_07925 IPR016152 Phosphotransferase/anion transporter CS348_07925 IPR002178 PTS EIIA type-2 domain CS348_07935 IPR004703 Phosphotransferase system, sugar-specific permease component CS348_07940 IPR029061 Thiamin diphosphate-binding fold CS348_07940 IPR005474 Transketolase, N-terminal CS348_07945 IPR005474 Transketolase, N-terminal CS348_07945 IPR033248 Transketolase, C-terminal domain CS348_07945 IPR020826 Transketolase binding site CS348_07945 IPR005475 Transketolase-like, pyrimidine-binding domain CS348_07945 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CS348_07945 IPR029061 Thiamin diphosphate-binding fold CS348_07945 IPR005477 Deoxyxylulose-5-phosphate synthase CS348_07950 IPR018385 C4-dicarboxylate anaerobic carrier-like CS348_07955 IPR010766 DRTGG CS348_07955 IPR002505 Phosphate acetyl/butaryl transferase CS348_07955 IPR016475 Phosphate acetyltransferase, bacteria CS348_07955 IPR042113 Phosphate acetyltransferase, domain 1 CS348_07955 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_07955 IPR042112 Phosphate acetyltransferase, domain 2 CS348_07955 IPR004614 Phosphate acetyltransferase CS348_07955 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CS348_07960 IPR023865 Aliphatic acid kinase, short-chain, conserved site CS348_07960 IPR000890 Aliphatic acid kinase, short-chain CS348_07960 IPR004372 Acetate/propionate kinase CS348_07965 IPR007334 Uncharacterised protein family UPF0208 CS348_07970 IPR005587 Uncharacterised protein family UPF0304, YfbU CS348_07970 IPR023146 YfbU, alpha-helical bundle domain superfamily CS348_07970 IPR023145 YfbU, helix-hairpin domain superfamily CS348_07975 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CS348_07975 IPR023214 HAD superfamily CS348_07975 IPR041492 Haloacid dehalogenase-like hydrolase CS348_07975 IPR006439 HAD hydrolase, subfamily IA CS348_07975 IPR036412 HAD-like superfamily CS348_07980 IPR031312 Sodium/sulphate symporter, conserved site CS348_07980 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CS348_07980 IPR004680 Citrate transporter-like domain CS348_07980 IPR006037 Regulator of K+ conductance, C-terminal CS348_07985 IPR022971 5'-deoxynucleotidase YfbR CS348_07985 IPR003607 HD/PDEase domain CS348_07985 IPR039356 Metal-dependent nucleoside 5'-monophosphatase CS348_07990 IPR015424 Pyridoxal phosphate-dependent transferase CS348_07990 IPR004839 Aminotransferase, class I/classII CS348_07990 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_07990 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_08000 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_08000 IPR005119 LysR, substrate-binding CS348_08000 IPR000847 Transcription regulator HTH, LysR CS348_08000 IPR036390 Winged helix DNA-binding domain superfamily CS348_08010 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily CS348_08010 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CS348_08010 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CS348_08015 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CS348_08015 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CS348_08020 IPR029014 [NiFe]-hydrogenase, large subunit CS348_08020 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CS348_08020 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CS348_08020 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CS348_08020 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CS348_08020 IPR001135 NADH-quinone oxidoreductase, subunit D CS348_08020 IPR023062 NADH dehydrogenase, subunit CD CS348_08020 IPR010218 NADH dehydrogenase, subunit C CS348_08020 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CS348_08025 IPR036249 Thioredoxin-like superfamily CS348_08025 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CS348_08025 IPR042128 NuoE domain CS348_08025 IPR002023 NADH-quinone oxidoreductase subunit E-like CS348_08030 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CS348_08030 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CS348_08030 IPR011537 NADH ubiquinone oxidoreductase, F subunit CS348_08030 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CS348_08030 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CS348_08030 IPR019554 Soluble ligand binding domain CS348_08030 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CS348_08035 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CS348_08035 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_08035 IPR006656 Molybdopterin oxidoreductase CS348_08035 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CS348_08035 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CS348_08035 IPR036010 2Fe-2S ferredoxin-like superfamily CS348_08035 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CS348_08035 IPR006657 Molybdopterin dinucleotide-binding domain CS348_08035 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_08040 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CS348_08040 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CS348_08045 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_08045 IPR010226 NADH-quinone oxidoreductase, chain I CS348_08045 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_08050 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ CS348_08050 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CS348_08055 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CS348_08055 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CS348_08060 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CS348_08060 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CS348_08060 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CS348_08060 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CS348_08065 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CS348_08065 IPR003918 NADH:ubiquinone oxidoreductase CS348_08065 IPR010227 NADH-quinone oxidoreductase, chain M/4 CS348_08070 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CS348_08070 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CS348_08075 IPR024181 Chemotaxis response regulator CheV CS348_08075 IPR036061 CheW-like domain superfamily CS348_08075 IPR011006 CheY-like superfamily CS348_08075 IPR001789 Signal transduction response regulator, receiver domain CS348_08075 IPR002545 CheW-like domain CS348_08080 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CS348_08080 IPR013469 Ribonuclease BN CS348_08080 IPR013471 Ribonuclease Z/BN CS348_08080 IPR001279 Metallo-beta-lactamase CS348_08085 IPR000182 GNAT domain CS348_08085 IPR016181 Acyl-CoA N-acyltransferase CS348_08090 IPR010279 Inner membrane protein YqjD/ElaB CS348_08095 IPR005801 ADC synthase CS348_08095 IPR015890 Chorismate-utilising enzyme, C-terminal CS348_08095 IPR004561 Isochorismate synthase CS348_08095 IPR034681 Isochorismate synthase MenF CS348_08100 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase CS348_08100 IPR032264 Menaquinone biosynthesis protein MenD, middle domain CS348_08100 IPR029061 Thiamin diphosphate-binding fold CS348_08100 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CS348_08100 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CS348_08105 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase CS348_08105 IPR029058 Alpha/Beta hydrolase fold CS348_08105 IPR000073 Alpha/beta hydrolase fold-1 CS348_08110 IPR029045 ClpP/crotonase-like domain superfamily CS348_08110 IPR014748 Enoyl-CoA hydratase, C-terminal CS348_08110 IPR001753 Enoyl-CoA hydratase/isomerase CS348_08110 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CS348_08110 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB CS348_08115 IPR029065 Enolase C-terminal domain-like CS348_08115 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CS348_08115 IPR010196 o-Succinylbenzoate synthase, MenC type1 CS348_08115 IPR029017 Enolase-like, N-terminal CS348_08115 IPR036849 Enolase-like, C-terminal domain superfamily CS348_08120 IPR020845 AMP-binding, conserved site CS348_08120 IPR000873 AMP-dependent synthetase/ligase CS348_08120 IPR042099 AMP-dependent synthetase-like superfamily CS348_08120 IPR010192 2-succinylbenzoate--CoA ligase CS348_08120 IPR025110 AMP-binding enzyme, C-terminal domain CS348_08125 IPR038679 Signal transduction protein PmrD superfamily CS348_08130 IPR000390 Small multidrug resistance protein family CS348_08130 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF CS348_08135 IPR000620 EamA domain CS348_08135 IPR000390 Small multidrug resistance protein family CS348_08135 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE CS348_08140 IPR003342 Glycosyl transferase family 39/83 CS348_08140 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase CS348_08145 IPR002509 NodB homology domain CS348_08145 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable CS348_08145 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CS348_08150 IPR005793 Formyl transferase, C-terminal CS348_08150 IPR001509 NAD-dependent epimerase/dehydratase CS348_08150 IPR021168 Bifunctional polymyxin resistance protein, ArnA CS348_08150 IPR011034 Formyl transferase-like, C-terminal domain superfamily CS348_08150 IPR002376 Formyl transferase, N-terminal CS348_08150 IPR036291 NAD(P)-binding domain superfamily CS348_08150 IPR036477 Formyl transferase, N-terminal domain superfamily CS348_08155 IPR029044 Nucleotide-diphospho-sugar transferases CS348_08155 IPR001173 Glycosyltransferase 2-like CS348_08155 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase CS348_08160 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB CS348_08160 IPR015424 Pyridoxal phosphate-dependent transferase CS348_08160 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CS348_08160 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_08160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_08165 IPR029033 Histidine phosphatase superfamily CS348_08165 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase CS348_08165 IPR013078 Histidine phosphatase superfamily, clade-1 CS348_08170 IPR020476 NUDIX hydrolase CS348_08170 IPR020084 NUDIX hydrolase, conserved site CS348_08170 IPR000086 NUDIX hydrolase domain CS348_08170 IPR023781 Nucleoside triphosphatase NudI CS348_08170 IPR015797 NUDIX hydrolase-like domain superfamily CS348_08175 IPR009998 YfaZ CS348_08175 IPR023614 Porin domain superfamily CS348_08175 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CS348_08180 IPR001453 MoaB/Mog domain CS348_08180 IPR036653 CinA-like, C-terminal CS348_08180 IPR008135 Competence-induced protein CinA CS348_08180 IPR036425 MoaB/Mog-like domain superfamily CS348_08185 IPR036390 Winged helix DNA-binding domain superfamily CS348_08185 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_08185 IPR005471 Transcription regulator IclR, N-terminal CS348_08185 IPR014757 Transcription regulator IclR, C-terminal CS348_08185 IPR029016 GAF-like domain superfamily CS348_08190 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CS348_08190 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CS348_08190 IPR023444 L-rhamnonate dehydratase CS348_08190 IPR029065 Enolase C-terminal domain-like CS348_08190 IPR029017 Enolase-like, N-terminal CS348_08190 IPR036849 Enolase-like, C-terminal domain superfamily CS348_08190 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CS348_08195 IPR011701 Major facilitator superfamily CS348_08195 IPR036259 MFS transporter superfamily CS348_08195 IPR020846 Major facilitator superfamily domain CS348_08200 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CS348_08200 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase CS348_08200 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_08200 IPR040442 Pyruvate kinase-like domain superfamily CS348_08205 IPR001453 MoaB/Mog domain CS348_08205 IPR036425 MoaB/Mog-like domain superfamily CS348_08205 IPR008135 Competence-induced protein CinA CS348_08205 IPR036653 CinA-like, C-terminal CS348_08225 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_08225 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_08225 IPR004017 Cysteine-rich domain CS348_08225 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit CS348_08225 IPR009051 Alpha-helical ferredoxin CS348_08230 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CS348_08230 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit CS348_08230 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_08235 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_08235 IPR007419 BFD-like [2Fe-2S]-binding domain CS348_08235 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CS348_08235 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit CS348_08235 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CS348_08235 IPR006076 FAD dependent oxidoreductase CS348_08240 IPR005267 Glycerol-3-phosphate transporter CS348_08240 IPR011701 Major facilitator superfamily CS348_08240 IPR020846 Major facilitator superfamily domain CS348_08240 IPR036259 MFS transporter superfamily CS348_08240 IPR021159 Glycerate/sugar phosphate transporter, conserved site CS348_08240 IPR000849 Sugar phosphate transporter CS348_08245 IPR030395 Glycerophosphodiester phosphodiesterase domain CS348_08245 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CS348_08250 IPR000847 Transcription regulator HTH, LysR CS348_08250 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_08250 IPR036390 Winged helix DNA-binding domain superfamily CS348_08250 IPR005119 LysR, substrate-binding CS348_08255 IPR036259 MFS transporter superfamily CS348_08255 IPR020846 Major facilitator superfamily domain CS348_08255 IPR011701 Major facilitator superfamily CS348_08260 IPR012675 Beta-grasp domain superfamily CS348_08260 IPR036010 2Fe-2S ferredoxin-like superfamily CS348_08260 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CS348_08260 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CS348_08265 IPR012348 Ribonucleotide reductase-like CS348_08265 IPR009078 Ferritin-like superfamily CS348_08265 IPR030475 Ribonucleotide reductase small subunit, acitve site CS348_08265 IPR000358 Ribonucleotide reductase small subunit family CS348_08265 IPR033909 Ribonucleotide reductase small subunit CS348_08270 IPR013346 Ribonucleotide reductase, class I , alpha subunit CS348_08270 IPR000788 Ribonucleotide reductase large subunit, C-terminal CS348_08270 IPR005144 ATP-cone domain CS348_08270 IPR013509 Ribonucleotide reductase large subunit, N-terminal CS348_08270 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CS348_08270 IPR039718 Ribonucleoside-diphosphate reductase large subunit CS348_08275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_08275 IPR010233 Ubiquinone biosynthesis O-methyltransferase CS348_08285 IPR036259 MFS transporter superfamily CS348_08285 IPR020846 Major facilitator superfamily domain CS348_08285 IPR011701 Major facilitator superfamily CS348_08290 IPR029065 Enolase C-terminal domain-like CS348_08290 IPR023592 D-galactonate dehydratase CS348_08290 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CS348_08290 IPR034593 Mandelate racemase-like CS348_08290 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CS348_08290 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CS348_08290 IPR029017 Enolase-like, N-terminal CS348_08290 IPR036849 Enolase-like, C-terminal domain superfamily CS348_08300 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CS348_08300 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CS348_08300 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CS348_08300 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CS348_08300 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CS348_08300 IPR005743 DNA gyrase, subunit A CS348_08300 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CS348_08305 IPR011006 CheY-like superfamily CS348_08305 IPR003594 Histidine kinase/HSP90-like ATPase CS348_08305 IPR001789 Signal transduction response regulator, receiver domain CS348_08305 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal CS348_08305 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_08305 IPR038388 RcsC, C-terminal domain superfamily CS348_08305 IPR030856 Sensor histidine kinase RcsC CS348_08305 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_08305 IPR005467 Histidine kinase domain CS348_08305 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_08305 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_08310 IPR030864 Transcriptional regulatory protein RcsB CS348_08310 IPR001789 Signal transduction response regulator, receiver domain CS348_08310 IPR000792 Transcription regulator LuxR, C-terminal CS348_08310 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_08310 IPR011006 CheY-like superfamily CS348_08310 IPR016032 Signal transduction response regulator, C-terminal effector CS348_08315 IPR005467 Histidine kinase domain CS348_08315 IPR030861 Phosphotransferase RcsD CS348_08315 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain CS348_08315 IPR036641 HPT domain superfamily CS348_08315 IPR038616 Phosphotransferase RcsD, RcsD-ABL domain superfamily CS348_08315 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CS348_08315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_08315 IPR003594 Histidine kinase/HSP90-like ATPase CS348_08325 IPR001702 Porin, Gram-negative type CS348_08325 IPR023614 Porin domain superfamily CS348_08325 IPR001897 Porin, gammaproteobacterial CS348_08325 IPR013793 Porin, Gram-negative type, conserved site CS348_08330 IPR042159 Flavin-trafficking protein ApbE CS348_08330 IPR003374 ApbE-like superfamily CS348_08330 IPR024932 Flavin transferase ApbE CS348_08335 IPR035451 Ada-like domain superfamily CS348_08335 IPR018060 DNA binding HTH domain, AraC-type CS348_08335 IPR018062 HTH domain AraC-type, conserved site CS348_08335 IPR009057 Homeobox-like domain superfamily CS348_08335 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CS348_08335 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CS348_08335 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CS348_08335 IPR016221 Bifunctional regulatory protein Ada CS348_08335 IPR004026 Ada DNA repair, metal-binding CS348_08335 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_08335 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CS348_08335 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CS348_08340 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CS348_08340 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily CS348_08340 IPR004574 Alkylated DNA repair protein AlkB CS348_08340 IPR005123 Oxoglutarate/iron-dependent dioxygenase CS348_08345 IPR003593 AAA+ ATPase domain CS348_08345 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_08345 IPR003439 ABC transporter-like CS348_08345 IPR017871 ABC transporter, conserved site CS348_08345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_08345 IPR011527 ABC transporter type 1, transmembrane domain CS348_08345 IPR005898 Cyclic peptide transporter CS348_08350 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria CS348_08350 IPR005658 Proteinase inhibitor I11, ecotin CS348_08350 IPR036198 Ecotin superfamily CS348_08350 IPR027438 Ecotin, C-terminal CS348_08355 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_08355 IPR004496 Ferredoxin-type protein NapF CS348_08355 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_08360 IPR005623 Chaperone NapD, nitrate reductase assembly CS348_08365 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_08365 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_08365 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_08365 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain CS348_08365 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_08365 IPR006657 Molybdopterin dinucleotide-binding domain CS348_08365 IPR010051 Periplasmic nitrate reductase, large subunit CS348_08365 IPR006656 Molybdopterin oxidoreductase CS348_08365 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_08370 IPR004494 MauM/NapG ferredoxin-type protein CS348_08370 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_08370 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_08370 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_08375 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_08375 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_08375 IPR011886 Ferredoxin-type protein, NapH/MauN family CS348_08385 IPR036280 Multiheme cytochrome superfamily CS348_08385 IPR011031 Multihaem cytochrome CS348_08385 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CS348_08390 IPR036280 Multiheme cytochrome superfamily CS348_08390 IPR024717 Denitrification system component NapC/NirT/NrfH CS348_08390 IPR011031 Multihaem cytochrome CS348_08390 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT CS348_08390 IPR038266 NapC/NirT cytochrome c superfamily CS348_08390 IPR005126 NapC/NirT cytochrome c, N-terminal CS348_08395 IPR005895 ABC transporter, haem export, CcmA CS348_08395 IPR003439 ABC transporter-like CS348_08395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_08395 IPR003593 AAA+ ATPase domain CS348_08395 IPR017871 ABC transporter, conserved site CS348_08400 IPR003544 Cytochrome c-type biogenesis protein CcmB CS348_08400 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CS348_08405 IPR002541 Cytochrome c assembly protein CS348_08405 IPR003557 Cytochrome c-type biogenesis protein CcmC CS348_08410 IPR007078 Haem exporter protein D (CcmD) CS348_08415 IPR036127 CcmE-like superfamily CS348_08415 IPR004329 CcmE/CycJ protein CS348_08420 IPR003568 Cytochrome c-type biogenesis protein CcmF CS348_08420 IPR002541 Cytochrome c assembly protein CS348_08420 IPR003567 Cytochrome c-type biogenesis protein CS348_08420 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CS348_08425 IPR013740 Redoxin CS348_08425 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CS348_08425 IPR017937 Thioredoxin, conserved site CS348_08425 IPR013766 Thioredoxin domain CS348_08425 IPR036249 Thioredoxin-like superfamily CS348_08430 IPR005616 CcmH/CycL/Ccl2/NrfF family CS348_08430 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CS348_08430 IPR013026 Tetratricopeptide repeat-containing domain CS348_08430 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_08430 IPR019734 Tetratricopeptide repeat CS348_08435 IPR016032 Signal transduction response regulator, C-terminal effector CS348_08435 IPR011006 CheY-like superfamily CS348_08435 IPR001789 Signal transduction response regulator, receiver domain CS348_08435 IPR000792 Transcription regulator LuxR, C-terminal CS348_08470 IPR024588 Inner membrane protein YejM, N-terminal CS348_08470 IPR012159 Inner membrane protein YejM CS348_08470 IPR017850 Alkaline-phosphatase-like, core domain superfamily CS348_08470 IPR000917 Sulfatase, N-terminal CS348_08475 IPR023202 YejL-like superfamily CS348_08475 IPR009857 Uncharacterised protein family UPF0352 CS348_08480 IPR007358 Nucleoid-associated protein NdpA CS348_08485 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CS348_08485 IPR020055 Ribosomal protein L25, short-form CS348_08485 IPR029751 Ribosomal protein L25 CS348_08485 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CS348_08490 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_08490 IPR006935 Helicase/UvrB, N-terminal CS348_08490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_08490 IPR011332 Zinc-binding ribosomal protein CS348_08490 IPR001650 Helicase, C-terminal CS348_08495 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CS348_08495 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_08495 IPR006145 Pseudouridine synthase, RsuA/RluA CS348_08495 IPR036986 RNA-binding S4 domain superfamily CS348_08495 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CS348_08495 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CS348_08495 IPR002942 RNA-binding S4 domain CS348_08500 IPR036259 MFS transporter superfamily CS348_08500 IPR020846 Major facilitator superfamily domain CS348_08500 IPR011701 Major facilitator superfamily CS348_08500 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CS348_08500 IPR004734 Multidrug resistance protein CS348_08510 IPR020489 Uncharacterised protein family YejG CS348_08515 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CS348_08515 IPR017871 ABC transporter, conserved site CS348_08515 IPR003593 AAA+ ATPase domain CS348_08515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_08515 IPR003439 ABC transporter-like CS348_08520 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CS348_08520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_08520 IPR035906 MetI-like superfamily CS348_08525 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_08525 IPR035906 MetI-like superfamily CS348_08530 IPR030678 Peptide/nickel binding protein, MppA-type CS348_08530 IPR039424 Solute-binding protein family 5 CS348_08530 IPR000914 Solute-binding protein family 5 domain CS348_08535 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CS348_08535 IPR001633 EAL domain CS348_08535 IPR035919 EAL domain superfamily CS348_08545 IPR038765 Papain-like cysteine peptidase superfamily CS348_08545 IPR000064 Endopeptidase, NLPC/P60 domain CS348_08555 IPR032908 Lipid A 1-diphosphate synthase CS348_08555 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CS348_08555 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CS348_08560 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CS348_08560 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CS348_08560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_08565 IPR001059 Translation elongation factor P/YeiP, central CS348_08565 IPR013852 Translation elongation factor P/YeiP, conserved site CS348_08565 IPR008991 Translation protein SH3-like domain superfamily CS348_08565 IPR011897 Translation elongation factor P-like, YeiP CS348_08565 IPR015365 Elongation factor P, C-terminal CS348_08565 IPR013185 Translation elongation factor, KOW-like CS348_08565 IPR020599 Translation elongation factor P/YeiP CS348_08565 IPR014722 Ribosomal protein L2, domain 2 CS348_08565 IPR012340 Nucleic acid-binding, OB-fold CS348_08575 IPR005358 Putative zinc- or iron-chelating domain containing protein CS348_08590 IPR004750 Sugar efflux CS348_08590 IPR036259 MFS transporter superfamily CS348_08590 IPR020846 Major facilitator superfamily domain CS348_08590 IPR011701 Major facilitator superfamily CS348_08595 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CS348_08595 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CS348_08595 IPR002178 PTS EIIA type-2 domain CS348_08595 IPR016152 Phosphotransferase/anion transporter CS348_08595 IPR035895 HPr-like superfamily CS348_08595 IPR000032 Phosphocarrier protein HPr-like CS348_08600 IPR022463 Fructose 1-phosphate kinase CS348_08600 IPR017583 Tagatose/fructose phosphokinase CS348_08600 IPR029056 Ribokinase-like CS348_08600 IPR011611 Carbohydrate kinase PfkB CS348_08600 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_08605 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CS348_08605 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CS348_08605 IPR036095 PTS system IIB component-like superfamily CS348_08605 IPR003352 Phosphotransferase system, EIIC CS348_08605 IPR013014 Phosphotransferase system, EIIC component, type 2 CS348_08605 IPR013011 Phosphotransferase system, EIIB component, type 2 CS348_08605 IPR006327 Phosphotransferase system, fructose IIC component CS348_08610 IPR013022 Xylose isomerase-like, TIM barrel domain CS348_08610 IPR018246 AP endonuclease 2, zinc binding site CS348_08610 IPR001719 AP endonuclease 2 CS348_08610 IPR036237 Xylose isomerase-like superfamily CS348_08615 IPR018383 Uncharacterised protein family UPF0324, prokaryote CS348_08615 IPR004630 Uncharacterised protein family UPF0324, bacteria CS348_08620 IPR005119 LysR, substrate-binding CS348_08620 IPR000847 Transcription regulator HTH, LysR CS348_08620 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_08620 IPR036390 Winged helix DNA-binding domain superfamily CS348_08625 IPR004840 Amino acid permease, conserved site CS348_08625 IPR004841 Amino acid permease/ SLC12A domain CS348_08635 IPR037066 TonB-dependent receptor, plug domain superfamily CS348_08635 IPR012910 TonB-dependent receptor, plug domain CS348_08635 IPR039426 Vitamin B12 transporter BtuB-like CS348_08635 IPR010917 TonB-dependent receptor, conserved site CS348_08635 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CS348_08635 IPR010916 TonB box, conserved site CS348_08635 IPR000531 TonB-dependent receptor-like, beta-barrel CS348_08640 IPR020846 Major facilitator superfamily domain CS348_08640 IPR036259 MFS transporter superfamily CS348_08640 IPR011701 Major facilitator superfamily CS348_08640 IPR021159 Glycerate/sugar phosphate transporter, conserved site CS348_08640 IPR000849 Sugar phosphate transporter CS348_08645 IPR036412 HAD-like superfamily CS348_08645 IPR023214 HAD superfamily CS348_08645 IPR041449 Phosphoserine phosphatase, N-terminal CS348_08645 IPR023190 Phosphoserine phosphatase, domain 2 CS348_08650 IPR005131 Serine dehydratase beta chain CS348_08650 IPR029009 Allosteric substrate binding domain superfamily CS348_08650 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CS348_08650 IPR005130 Serine dehydratase-like, alpha subunit CS348_08660 IPR014186 S-formylglutathione hydrolase CS348_08660 IPR000801 Putative esterase CS348_08660 IPR029058 Alpha/Beta hydrolase fold CS348_08670 IPR001474 GTP cyclohydrolase I CS348_08670 IPR018234 GTP cyclohydrolase I, conserved site CS348_08670 IPR020602 GTP cyclohydrolase I domain CS348_08675 IPR007349 Domain of unknown function DUF418 CS348_08680 IPR000843 LacI-type HTH domain CS348_08680 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_08680 IPR028082 Periplasmic binding protein-like I CS348_08685 IPR025997 Periplasmic binding protein CS348_08685 IPR028082 Periplasmic binding protein-like I CS348_08690 IPR015862 ABC transporter, galactose import, MglA CS348_08690 IPR017871 ABC transporter, conserved site CS348_08690 IPR003439 ABC transporter-like CS348_08690 IPR003593 AAA+ ATPase domain CS348_08690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_08695 IPR001851 ABC transporter, permease CS348_08695 IPR030158 Galactoside transport system permease protein MglC CS348_08700 IPR005720 Dihydroorotate dehydrogenase domain CS348_08700 IPR013785 Aldolase-type TIM barrel CS348_08700 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_08700 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_08705 IPR023753 FAD/NAD(P)-binding domain CS348_08705 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_08705 IPR028261 Dihydroprymidine dehydrogenase domain II CS348_08705 IPR009051 Alpha-helical ferredoxin CS348_08715 IPR020155 Uncharacterised protein family YeiS CS348_08720 IPR003848 Domain of unknown function DUF218 CS348_08720 IPR023604 Uncharacterised protein family SanA CS348_08725 IPR016192 APOBEC/CMP deaminase, zinc-binding CS348_08725 IPR020797 Cytidine deaminase, bacteria CS348_08725 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain CS348_08725 IPR016193 Cytidine deaminase-like CS348_08725 IPR006263 Cytidine deaminase, homodimeric CS348_08725 IPR002125 Cytidine and deoxycytidylate deaminase domain CS348_08730 IPR005261 Conserved hypothetical protein CHP00659 CS348_08730 IPR007300 CidB/LrgB family CS348_08735 IPR005538 LrgA/CidA family CS348_08735 IPR022957 Uncharacterised protein family UPF0299 CS348_08740 IPR005119 LysR, substrate-binding CS348_08740 IPR000847 Transcription regulator HTH, LysR CS348_08740 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_08740 IPR036390 Winged helix DNA-binding domain superfamily CS348_08740 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain CS348_08745 IPR020846 Major facilitator superfamily domain CS348_08745 IPR011701 Major facilitator superfamily CS348_08745 IPR036259 MFS transporter superfamily CS348_08750 IPR013096 Cupin 2, conserved barrel CS348_08750 IPR014710 RmlC-like jelly roll fold CS348_08750 IPR011051 RmlC-like cupin domain superfamily CS348_08755 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CS348_08755 IPR011234 Fumarylacetoacetase-like, C-terminal CS348_08760 IPR036249 Thioredoxin-like superfamily CS348_08760 IPR034333 Glutathione S-transferases, class Zeta , N-terminal CS348_08760 IPR034330 Glutathione S-transferases, class Zeta , C-terminal CS348_08760 IPR005955 Glutathione S-transferases, class Zeta CS348_08760 IPR004046 Glutathione S-transferase, C-terminal CS348_08760 IPR040079 Glutathione Transferase family CS348_08760 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CS348_08760 IPR010987 Glutathione S-transferase, C-terminal-like CS348_08760 IPR004045 Glutathione S-transferase, N-terminal CS348_08765 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_08765 IPR002938 FAD-binding domain CS348_08770 IPR035587 DUS-like, FMN-binding domain CS348_08770 IPR013785 Aldolase-type TIM barrel CS348_08770 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal CS348_08770 IPR001269 tRNA-dihydrouridine synthase CS348_08770 IPR032886 tRNA-dihydrouridine(16) synthase CS348_08770 IPR018517 tRNA-dihydrouridine synthase, conserved site CS348_08780 IPR003423 Outer membrane efflux protein CS348_08780 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CS348_08785 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_08785 IPR036291 NAD(P)-binding domain superfamily CS348_08785 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_08790 IPR032816 SNARE associated Golgi protein CS348_08795 IPR006977 Yip1 domain CS348_08805 IPR012338 Beta-lactamase/transpeptidase-like CS348_08805 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CS348_08805 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CS348_08810 IPR016164 FAD-linked oxidase-like, C-terminal CS348_08810 IPR012256 D-lactate dehydrogenase CS348_08810 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 CS348_08810 IPR036318 FAD-binding, type PCMH-like superfamily CS348_08810 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 CS348_08810 IPR016167 FAD-binding, type PCMH, subdomain 1 CS348_08810 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal CS348_08810 IPR016166 FAD-binding domain, PCMH-type CS348_08810 IPR006094 FAD linked oxidase, N-terminal CS348_08810 IPR016169 FAD-binding, type PCMH, subdomain 2 CS348_08815 IPR026891 Fibronectin type III-like domain CS348_08815 IPR017853 Glycoside hydrolase superfamily CS348_08815 IPR002772 Glycoside hydrolase family 3 C-terminal domain CS348_08815 IPR019800 Glycoside hydrolase, family 3, active site CS348_08815 IPR013783 Immunoglobulin-like fold CS348_08815 IPR001764 Glycoside hydrolase, family 3, N-terminal CS348_08815 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CS348_08815 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CS348_08820 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CS348_08825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_08825 IPR035906 MetI-like superfamily CS348_08830 IPR003593 AAA+ ATPase domain CS348_08830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_08830 IPR017871 ABC transporter, conserved site CS348_08830 IPR003439 ABC transporter-like CS348_08835 IPR035906 MetI-like superfamily CS348_08835 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_08840 IPR020870 Uncharacterised protein family UPF0387, membrane CS348_08845 IPR009061 Putative DNA-binding domain superfamily CS348_08845 IPR000551 MerR-type HTH domain CS348_08850 IPR003018 GAF domain CS348_08850 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CS348_08850 IPR010559 Signal transduction histidine kinase, internal region CS348_08850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_08855 IPR011006 CheY-like superfamily CS348_08855 IPR007492 LytTR DNA-binding domain CS348_08855 IPR001789 Signal transduction response regulator, receiver domain CS348_08860 IPR009921 Domain of unknown function DUF1456 CS348_08870 IPR009736 Protein of unknown function DUF1307 CS348_08870 IPR036699 YehR-like superfamily CS348_08875 IPR023458 Methionine-tRNA ligase, type 1 CS348_08875 IPR033911 Methioninyl-tRNA synthetase core domain CS348_08875 IPR002547 tRNA-binding domain CS348_08875 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_08875 IPR012340 Nucleic acid-binding, OB-fold CS348_08875 IPR029038 Methionyl-tRNA synthetase, Zn-domain CS348_08875 IPR015413 Methionyl/Leucyl tRNA synthetase CS348_08875 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CS348_08875 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CS348_08875 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CS348_08875 IPR014758 Methionyl-tRNA synthetase CS348_08875 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CS348_08880 IPR000808 Mrp, conserved site CS348_08880 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CS348_08880 IPR019591 Mrp/NBP35 ATP-binding protein CS348_08880 IPR034904 Fe-S cluster assembly domain superfamily CS348_08880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_08895 IPR016148 Pili assembly chaperone, C-terminal CS348_08895 IPR001829 Pili assembly chaperone, bacterial CS348_08895 IPR013783 Immunoglobulin-like fold CS348_08895 IPR016147 Pili assembly chaperone, N-terminal CS348_08895 IPR018046 Pili assembly chaperone, conserved site CS348_08895 IPR008962 PapD-like superfamily CS348_08895 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_08900 IPR000015 Outer membrane usher protein CS348_08900 IPR018030 Fimbrial membrane usher, conserved site CS348_08900 IPR037224 PapC, N-terminal domain superfamily CS348_08900 IPR042186 Outer membrane usher protein FimD, plug domain CS348_08900 IPR025949 PapC-like, C-terminal domain CS348_08900 IPR025885 PapC, N-terminal domain CS348_08910 IPR024572 Nickel/cobalt homeostasis protein RcnB CS348_08915 IPR000417 Hydroxyethylthiazole kinase CS348_08915 IPR029056 Ribokinase-like CS348_08920 IPR029056 Ribokinase-like CS348_08920 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CS348_08920 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CS348_08925 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CS348_08925 IPR000524 Transcription regulator HTH, GntR CS348_08925 IPR011663 UbiC transcription regulator-associated CS348_08925 IPR036390 Winged helix DNA-binding domain superfamily CS348_08925 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_08930 IPR029056 Ribokinase-like CS348_08930 IPR002139 Ribokinase/fructokinase CS348_08930 IPR011611 Carbohydrate kinase PfkB CS348_08930 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_08935 IPR005502 ADP-ribosylation/Crystallin J1 CS348_08935 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CS348_08940 IPR004740 Nucleoside:H+ symporter CS348_08940 IPR036259 MFS transporter superfamily CS348_08940 IPR020846 Major facilitator superfamily domain CS348_08945 IPR013785 Aldolase-type TIM barrel CS348_08945 IPR041720 Aldolase FbaB-like, archaeal-type CS348_08945 IPR002915 DeoC/FbaB/ lacD aldolase CS348_08950 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CS348_08950 IPR022433 Lipid kinase YegS CS348_08950 IPR001206 Diacylglycerol kinase, catalytic domain CS348_08950 IPR005218 Diacylglycerol/lipid kinase CS348_08950 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CS348_08960 IPR010261 Tir chaperone protein (CesT) family CS348_08995 IPR016032 Signal transduction response regulator, C-terminal effector CS348_08995 IPR001789 Signal transduction response regulator, receiver domain CS348_08995 IPR039420 Transcriptional regulatory protein WalR-like CS348_08995 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_08995 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_08995 IPR011006 CheY-like superfamily CS348_09000 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_09000 IPR005467 Histidine kinase domain CS348_09000 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_09000 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_09000 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_09000 IPR003660 HAMP domain CS348_09000 IPR003594 Histidine kinase/HSP90-like ATPase CS348_09005 IPR036259 MFS transporter superfamily CS348_09005 IPR020846 Major facilitator superfamily domain CS348_09005 IPR011701 Major facilitator superfamily CS348_09005 IPR023721 Multidrug resistance protein MdtD CS348_09010 IPR023931 Multidrug resistance protein MdtC CS348_09010 IPR001036 Acriflavin resistance protein CS348_09010 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CS348_09015 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CS348_09015 IPR001036 Acriflavin resistance protein CS348_09015 IPR022831 Multidrug resistance protein MdtB CS348_09020 IPR006143 RND efflux pump, membrane fusion protein CS348_09020 IPR022824 Multidrug resistance protein MdtA CS348_09020 IPR039562 Membrane fusion protein, biotin-lipoyl like domain CS348_09025 IPR042054 YegD-like CS348_09025 IPR013126 Heat shock protein 70 family CS348_09025 IPR018181 Heat shock protein 70, conserved site CS348_09035 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CS348_09035 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily CS348_09035 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CS348_09035 IPR003265 HhH-GPD domain CS348_09035 IPR011257 DNA glycosylase CS348_09035 IPR000035 Alkylbase DNA glycosidase, conserved site CS348_09040 IPR007895 MASE1 CS348_09040 IPR029787 Nucleotide cyclase CS348_09040 IPR001610 PAC motif CS348_09040 IPR000014 PAS domain CS348_09040 IPR000700 PAS-associated, C-terminal CS348_09040 IPR035965 PAS domain superfamily CS348_09040 IPR013656 PAS fold-4 CS348_09040 IPR013655 PAS fold-3 CS348_09040 IPR000160 GGDEF domain CS348_09040 IPR001633 EAL domain CS348_09040 IPR035919 EAL domain superfamily CS348_09045 IPR006083 Phosphoribulokinase/uridine kinase CS348_09045 IPR026008 Uridine kinase CS348_09045 IPR000764 Uridine kinase-like CS348_09045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_09050 IPR033704 dUTPase, trimeric CS348_09050 IPR011962 dCTP deaminase CS348_09050 IPR029054 dUTPase-like CS348_09050 IPR036157 dUTPase-like superfamily CS348_09055 IPR007844 AsmA CS348_09060 IPR005170 Transporter-associated domain CS348_09060 IPR036318 FAD-binding, type PCMH-like superfamily CS348_09060 IPR005496 Integral membrane protein TerC CS348_09060 IPR016169 FAD-binding, type PCMH, subdomain 2 CS348_09060 IPR000644 CBS domain CS348_09070 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain CS348_09070 IPR019554 Soluble ligand binding domain CS348_09070 IPR003715 Polysaccharide export protein CS348_09075 IPR023485 Phosphotyrosine protein phosphatase I CS348_09075 IPR036196 Phosphotyrosine protein phosphatase I superfamily CS348_09075 IPR017867 Protein-tyrosine phosphatase, low molecular weight CS348_09080 IPR032807 Tyrosine kinase, G-rich domain CS348_09080 IPR025669 AAA domain CS348_09080 IPR003856 Polysaccharide chain length determinant N-terminal domain CS348_09080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_09080 IPR005702 Exopolysaccharide synthesis protein CS348_09085 IPR001173 Glycosyltransferase 2-like CS348_09085 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA CS348_09085 IPR029044 Nucleotide-diphospho-sugar transferases CS348_09090 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB CS348_09090 IPR011004 Trimeric LpxA-like superfamily CS348_09090 IPR005881 Serine O-acetyltransferase CS348_09090 IPR018357 Hexapeptide transferase, conserved site CS348_09090 IPR001451 Hexapeptide repeat CS348_09095 IPR001296 Glycosyl transferase, family 1 CS348_09095 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CS348_09095 IPR023916 Colanic acid biosynthesis, glycosyl transferase, WcaC CS348_09100 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD CS348_09105 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE CS348_09105 IPR001173 Glycosyltransferase 2-like CS348_09105 IPR029044 Nucleotide-diphospho-sugar transferases CS348_09110 IPR011004 Trimeric LpxA-like superfamily CS348_09110 IPR018357 Hexapeptide transferase, conserved site CS348_09110 IPR001451 Hexapeptide repeat CS348_09110 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF CS348_09115 IPR016040 NAD(P)-binding domain CS348_09115 IPR006368 GDP-mannose 4,6-dehydratase CS348_09115 IPR036291 NAD(P)-binding domain superfamily CS348_09120 IPR036291 NAD(P)-binding domain superfamily CS348_09120 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase CS348_09120 IPR001509 NAD-dependent epimerase/dehydratase CS348_09125 IPR033715 GDP-mannose mannosyl hydrolase CS348_09125 IPR028613 GDP-mannose mannosyl hydrolase, Enterobacteria CS348_09125 IPR015797 NUDIX hydrolase-like domain superfamily CS348_09125 IPR020084 NUDIX hydrolase, conserved site CS348_09125 IPR000086 NUDIX hydrolase domain CS348_09130 IPR001296 Glycosyl transferase, family 1 CS348_09130 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CS348_09130 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI CS348_09135 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal CS348_09135 IPR014710 RmlC-like jelly roll fold CS348_09135 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase CS348_09135 IPR005835 Nucleotidyl transferase domain CS348_09135 IPR029044 Nucleotide-diphospho-sugar transferases CS348_09135 IPR011051 RmlC-like cupin domain superfamily CS348_09140 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CS348_09140 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CS348_09140 IPR016066 Alpha-D-phosphohexomutase, conserved site CS348_09140 IPR005841 Alpha-D-phosphohexomutase superfamily CS348_09140 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CS348_09140 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CS348_09140 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CS348_09140 IPR005843 Alpha-D-phosphohexomutase, C-terminal CS348_09145 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CS348_09145 IPR003362 Bacterial sugar transferase CS348_09145 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ CS348_09155 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK CS348_09155 IPR007345 Polysaccharide pyruvyl transferase CS348_09160 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL CS348_09160 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CS348_09160 IPR001296 Glycosyl transferase, family 1 CS348_09165 IPR012334 Pectin lyase fold CS348_09165 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_09165 IPR011050 Pectin lyase fold/virulence factor CS348_09165 IPR023882 Colanic acid biosynthesis WcaM CS348_09170 IPR001509 NAD-dependent epimerase/dehydratase CS348_09170 IPR036291 NAD(P)-binding domain superfamily CS348_09175 IPR005835 Nucleotidyl transferase domain CS348_09175 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit CS348_09175 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CS348_09175 IPR029044 Nucleotide-diphospho-sugar transferases CS348_09180 IPR002797 Polysaccharide biosynthesis protein CS348_09185 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE CS348_09185 IPR029044 Nucleotide-diphospho-sugar transferases CS348_09185 IPR001173 Glycosyltransferase 2-like CS348_09195 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CS348_09195 IPR001296 Glycosyl transferase, family 1 CS348_09200 IPR036291 NAD(P)-binding domain superfamily CS348_09200 IPR016040 NAD(P)-binding domain CS348_09200 IPR005886 UDP-glucose 4-epimerase CS348_09210 IPR036291 NAD(P)-binding domain superfamily CS348_09210 IPR016040 NAD(P)-binding domain CS348_09210 IPR006368 GDP-mannose 4,6-dehydratase CS348_09215 IPR036291 NAD(P)-binding domain superfamily CS348_09215 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase CS348_09215 IPR001509 NAD-dependent epimerase/dehydratase CS348_09220 IPR000086 NUDIX hydrolase domain CS348_09220 IPR015797 NUDIX hydrolase-like domain superfamily CS348_09220 IPR033715 GDP-mannose mannosyl hydrolase CS348_09225 IPR005835 Nucleotidyl transferase domain CS348_09225 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal CS348_09225 IPR029044 Nucleotide-diphospho-sugar transferases CS348_09225 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase CS348_09225 IPR011051 RmlC-like cupin domain superfamily CS348_09225 IPR014710 RmlC-like jelly roll fold CS348_09230 IPR001173 Glycosyltransferase 2-like CS348_09230 IPR029044 Nucleotide-diphospho-sugar transferases CS348_09235 IPR016066 Alpha-D-phosphohexomutase, conserved site CS348_09235 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CS348_09235 IPR005843 Alpha-D-phosphohexomutase, C-terminal CS348_09235 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CS348_09235 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CS348_09235 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CS348_09235 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CS348_09235 IPR005841 Alpha-D-phosphohexomutase superfamily CS348_09240 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_09240 IPR006184 6-phosphogluconate-binding site CS348_09240 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CS348_09240 IPR006183 6-phosphogluconate dehydrogenase CS348_09240 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CS348_09240 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_09240 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CS348_09240 IPR036291 NAD(P)-binding domain superfamily CS348_09250 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CS348_09250 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CS348_09250 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_09250 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CS348_09250 IPR036291 NAD(P)-binding domain superfamily CS348_09250 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CS348_09250 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CS348_09250 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CS348_09255 IPR003856 Polysaccharide chain length determinant N-terminal domain CS348_09260 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CS348_09260 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CS348_09260 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CS348_09260 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CS348_09260 IPR023019 Histidine biosynthesis bifunctional protein HisIE CS348_09265 IPR004651 Histidine biosynthesis, HisF CS348_09265 IPR011060 Ribulose-phosphate binding barrel CS348_09265 IPR006062 Histidine biosynthesis CS348_09265 IPR013785 Aldolase-type TIM barrel CS348_09270 IPR011060 Ribulose-phosphate binding barrel CS348_09270 IPR013785 Aldolase-type TIM barrel CS348_09270 IPR006062 Histidine biosynthesis CS348_09270 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CS348_09270 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CS348_09275 IPR017926 Glutamine amidotransferase CS348_09275 IPR010139 Imidazole glycerol phosphate synthase, subunit H CS348_09275 IPR029062 Class I glutamine amidotransferase-like CS348_09280 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CS348_09280 IPR036412 HAD-like superfamily CS348_09280 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CS348_09280 IPR023214 HAD superfamily CS348_09280 IPR020566 Histidine biosynthesis bifunctional protein HisB CS348_09280 IPR005954 Histidinol-phosphatase CS348_09280 IPR006543 Histidinol-phosphate phosphatase CS348_09280 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily CS348_09280 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_09280 IPR000807 Imidazoleglycerol-phosphate dehydratase CS348_09285 IPR004839 Aminotransferase, class I/classII CS348_09285 IPR005861 Histidinol-phosphate aminotransferase family CS348_09285 IPR015424 Pyridoxal phosphate-dependent transferase CS348_09285 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_09285 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CS348_09285 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_09290 IPR001692 Histidinol dehydrogenase, conserved site CS348_09290 IPR022695 Histidinol dehydrogenase, monofunctional CS348_09290 IPR012131 Histidinol dehydrogenase CS348_09290 IPR016161 Aldehyde/histidinol dehydrogenase CS348_09295 IPR020621 ATP phosphoribosyltransferase HisG, long form CS348_09295 IPR011322 Nitrogen regulatory PII-like, alpha/beta CS348_09295 IPR018198 ATP phosphoribosyltransferase, conserved site CS348_09295 IPR013820 ATP phosphoribosyltransferase, catalytic domain CS348_09295 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CS348_09295 IPR013115 Histidine biosynthesis HisG, C-terminal CS348_09295 IPR001348 ATP phosphoribosyltransferase HisG CS348_09305 IPR001509 NAD-dependent epimerase/dehydratase CS348_09305 IPR036291 NAD(P)-binding domain superfamily CS348_09310 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_09310 IPR000847 Transcription regulator HTH, LysR CS348_09310 IPR036390 Winged helix DNA-binding domain superfamily CS348_09310 IPR005119 LysR, substrate-binding CS348_09315 IPR002293 Amino acid/polyamine transporter I CS348_09320 IPR034748 Exonuclease I, C-terminal alpha-helical domain CS348_09320 IPR023607 Exodeoxyribonuclease I CS348_09320 IPR013520 Exonuclease, RNase T/DNA polymerase III CS348_09320 IPR013620 Exodeoxyribonuclease I, C-terminal CS348_09320 IPR012337 Ribonuclease H-like superfamily CS348_09320 IPR036397 Ribonuclease H superfamily CS348_09320 IPR038649 Exonuclease I, SH3-like domain superfamily CS348_09320 IPR034747 Exonuclease I, SH3-like domain CS348_09325 IPR001646 Pentapeptide repeat CS348_09325 IPR025725 E3 ubiquitin-protein ligase SopA-like, catalytic domain CS348_09325 IPR038270 SopA-like, catalytic domain superfamily CS348_09325 IPR025726 E3 ubiquitin ligase SopA-like central domain CS348_09340 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_09340 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_09340 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_09340 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_09340 IPR006656 Molybdopterin oxidoreductase CS348_09340 IPR006657 Molybdopterin dinucleotide-binding domain CS348_09340 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_09340 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_09345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_09345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_09350 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CS348_09350 IPR016174 Di-haem cytochrome, transmembrane CS348_09355 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CS348_09355 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CS348_09355 IPR012338 Beta-lactamase/transpeptidase-like CS348_09355 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CS348_09355 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CS348_09355 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CS348_09360 IPR011256 Regulatory factor, effector binding domain superfamily CS348_09360 IPR024911 DNA gyrase inhibitor GyrI CS348_09360 IPR010499 Bacterial transcription activator, effector binding CS348_09360 IPR029442 GyrI-like small molecule binding domain CS348_09365 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CS348_09370 IPR007458 Protein of unknown function DUF496 CS348_09375 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related CS348_09375 IPR006204 GHMP kinase N-terminal domain CS348_09375 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_09375 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_09380 IPR023865 Aliphatic acid kinase, short-chain, conserved site CS348_09380 IPR004372 Acetate/propionate kinase CS348_09380 IPR000890 Aliphatic acid kinase, short-chain CS348_09380 IPR024896 Propionate kinase PduW CS348_09385 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_09385 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV CS348_09390 IPR009307 Ethanolamine utilisation EutS CS348_09390 IPR037233 CcmK-like superfamily CS348_09390 IPR000249 Microcompartment protein, bacteria CS348_09400 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_09400 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CS348_09400 IPR009051 Alpha-helical ferredoxin CS348_09400 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CS348_09400 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC CS348_09400 IPR019554 Soluble ligand binding domain CS348_09400 IPR026902 RnfC Barrel sandwich hybrid domain CS348_09400 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_09405 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CS348_09405 IPR039697 Iron-type alcohol dehydrogenase-like CS348_09405 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CS348_09410 IPR015590 Aldehyde dehydrogenase domain CS348_09410 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_09410 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_09410 IPR016161 Aldehyde/histidinol dehydrogenase CS348_09410 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CS348_09415 IPR036451 Cobalamin adenosyltransferase-like superfamily CS348_09415 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type CS348_09415 IPR016030 Cobalamin adenosyltransferase-like CS348_09420 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CS348_09420 IPR036677 EutN/Ccml superfamily CS348_09430 IPR008300 Phosphate propanoyltransferase CS348_09435 IPR020808 Bacterial microcompartments protein, conserved site CS348_09435 IPR037233 CcmK-like superfamily CS348_09435 IPR000249 Microcompartment protein, bacteria CS348_09440 IPR020808 Bacterial microcompartments protein, conserved site CS348_09440 IPR000249 Microcompartment protein, bacteria CS348_09440 IPR037233 CcmK-like superfamily CS348_09450 IPR030994 Diol dehydratase reactivase ATPase-like domain CS348_09450 IPR040916 DD-reactivating factor swiveling domain CS348_09450 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily CS348_09450 IPR009191 Diol dehydratase-reactivating factor alpha subunit CS348_09455 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily CS348_09455 IPR003207 Propanediol/glycerol dehydratase, small subunit CS348_09460 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor CS348_09460 IPR025541 Propanediol/glycerol dehydratase, medium subunit CS348_09460 IPR010254 B12-dependent dehydratases, beta subunit CS348_09465 IPR036999 Diol/glycerol dehydratase, large subunit superfamily CS348_09465 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic CS348_09465 IPR003206 Diol/glycerol dehydratase, large subunit CS348_09470 IPR037233 CcmK-like superfamily CS348_09470 IPR000249 Microcompartment protein, bacteria CS348_09470 IPR030984 Microcompartment protein PduB CS348_09470 IPR009193 Polyhedral organelle shell protein, EutL/PduB type CS348_09475 IPR020808 Bacterial microcompartments protein, conserved site CS348_09475 IPR037233 CcmK-like superfamily CS348_09475 IPR000249 Microcompartment protein, bacteria CS348_09480 IPR023271 Aquaporin-like CS348_09480 IPR022357 Major intrinsic protein, conserved site CS348_09480 IPR000425 Major intrinsic protein CS348_09485 IPR009057 Homeobox-like domain superfamily CS348_09485 IPR018060 DNA binding HTH domain, AraC-type CS348_09485 IPR018771 PocR domain CS348_09485 IPR018062 HTH domain AraC-type, conserved site CS348_09485 IPR020449 Transcription regulator HTH, AraC- type CS348_09490 IPR011698 CobB/CobQ-like glutamine amidotransferase CS348_09490 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CS348_09490 IPR017929 CobB/CobQ glutamine amidotransferase CS348_09490 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA CS348_09490 IPR029062 Class I glutamine amidotransferase-like CS348_09490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_09495 IPR004485 Cobalamin biosynthesis CobD/CbiB CS348_09500 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC CS348_09500 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily CS348_09505 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD CS348_09505 IPR036074 CbiD superfamily CS348_09510 IPR014777 Tetrapyrrole methylase, subdomain 1 CS348_09510 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase CS348_09510 IPR000878 Tetrapyrrole methylase CS348_09510 IPR035996 Tetrapyrrole methylase superfamily CS348_09515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_09515 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit CS348_09515 IPR007848 Methyltransferase small domain CS348_09520 IPR014777 Tetrapyrrole methylase, subdomain 1 CS348_09520 IPR000878 Tetrapyrrole methylase CS348_09520 IPR035996 Tetrapyrrole methylase superfamily CS348_09520 IPR014776 Tetrapyrrole methylase, subdomain 2 CS348_09520 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase CS348_09520 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CS348_09525 IPR021744 Cobalamin synthesis G, N-terminal CS348_09525 IPR038029 GbiG N-terminal domain superfamily CS348_09525 IPR021745 Cobalamin biosynthesis central region CS348_09525 IPR036518 CobE/GbiG C-terminal domain superfamily CS348_09525 IPR002750 CobE/GbiG C-terminal domain CS348_09530 IPR014777 Tetrapyrrole methylase, subdomain 1 CS348_09530 IPR035996 Tetrapyrrole methylase superfamily CS348_09530 IPR000878 Tetrapyrrole methylase CS348_09530 IPR006363 Precorrin-3B C17-methyltransferase domain CS348_09530 IPR014776 Tetrapyrrole methylase, subdomain 2 CS348_09535 IPR003723 Precorrin-6x reductase CS348_09540 IPR010388 Anaerobic cobalt chelatase CS348_09545 IPR000878 Tetrapyrrole methylase CS348_09545 IPR035996 Tetrapyrrole methylase superfamily CS348_09545 IPR014777 Tetrapyrrole methylase, subdomain 1 CS348_09545 IPR014776 Tetrapyrrole methylase, subdomain 2 CS348_09545 IPR012382 Precorrin-2 C(20)-methyltransferase CS348_09545 IPR006364 Precorrin-2 C(20)-methyltransferase domain CS348_09545 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CS348_09550 IPR018024 Cobalamin (vitamin B12) transport protein CbiM CS348_09550 IPR002751 Metal transport protein CbiM/NikMN CS348_09555 IPR003705 Cobalt transport protein CbiN CS348_09560 IPR012809 Cobalt ECF transporter T component CbiQ CS348_09560 IPR003339 ABC/ECF transporter, transmembrane component CS348_09565 IPR017871 ABC transporter, conserved site CS348_09565 IPR015856 ABC transporter, CbiO/EcfA subunit CS348_09565 IPR003593 AAA+ ATPase domain CS348_09565 IPR003439 ABC transporter-like CS348_09565 IPR005876 Cobalt transport protein ATP-binding subunit CS348_09565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_09570 IPR004459 Cobyric acid synthase CobQ CS348_09570 IPR011698 CobB/CobQ-like glutamine amidotransferase CS348_09570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_09570 IPR017929 CobB/CobQ glutamine amidotransferase CS348_09570 IPR029062 Class I glutamine amidotransferase-like CS348_09570 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 CS348_09575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_09575 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase CS348_09580 IPR003805 Adenosylcobinamide-GDP ribazoletransferase CS348_09585 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like CS348_09585 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal CS348_09585 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic CS348_09585 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily CS348_09590 IPR005490 L,D-transpeptidase catalytic domain CS348_09590 IPR038063 L,D-transpeptidase catalytic domain-like CS348_09590 IPR041597 L,D-transpeptidase C-terminal domain CS348_09605 IPR000310 Orn/Lys/Arg decarboxylase, major domain CS348_09605 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CS348_09605 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CS348_09605 IPR015424 Pyridoxal phosphate-dependent transferase CS348_09605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_09620 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CS348_09620 IPR036291 NAD(P)-binding domain superfamily CS348_09620 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CS348_09620 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CS348_09620 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CS348_09620 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CS348_09625 IPR005119 LysR, substrate-binding CS348_09625 IPR000847 Transcription regulator HTH, LysR CS348_09625 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_09625 IPR036390 Winged helix DNA-binding domain superfamily CS348_09635 IPR036390 Winged helix DNA-binding domain superfamily CS348_09635 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_09635 IPR011991 ArsR-like helix-turn-helix domain CS348_09635 IPR018334 ArsR-type transcription regulator, HTH motif CS348_09635 IPR001845 HTH ArsR-type DNA-binding domain CS348_09640 IPR036196 Phosphotyrosine protein phosphatase I superfamily CS348_09640 IPR023485 Phosphotyrosine protein phosphatase I CS348_09640 IPR014064 Arsenate reductase ArsC CS348_09645 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD CS348_09645 IPR036249 Thioredoxin-like superfamily CS348_09650 IPR025723 Anion-transporting ATPase-like domain CS348_09650 IPR027541 Arsenical pump-driving ATPase CS348_09650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_09650 IPR016300 Arsenical pump ATPase, ArsA/GET3 CS348_09650 IPR003593 AAA+ ATPase domain CS348_09655 IPR004706 Arsenical-resistance protein Acr3 CS348_09655 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 CS348_09655 IPR038770 Sodium/solute symporter superfamily CS348_09675 IPR002528 Multi antimicrobial extrusion protein CS348_09705 IPR000845 Nucleoside phosphorylase domain CS348_09705 IPR011271 AMP nucleosidase CS348_09705 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily CS348_09705 IPR018953 AMP nucleoside phosphorylase, N-terminal CS348_09705 IPR035994 Nucleoside phosphorylase superfamily CS348_09730 IPR042252 MtfA, N-terminal CS348_09730 IPR010384 MtfA family CS348_09730 IPR024079 Metallopeptidase, catalytic domain superfamily CS348_09750 IPR015927 Peptidase S24/S26A/S26B/S26C CS348_09750 IPR006197 Peptidase S24, LexA-like CS348_09750 IPR036286 LexA/Signal peptidase-like superfamily CS348_09750 IPR039418 LexA-like CS348_09755 IPR025188 Domain of unknown function DUF4113 CS348_09755 IPR017961 DNA polymerase, Y-family, little finger domain CS348_09755 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CS348_09755 IPR001126 UmuC domain CS348_09760 IPR002059 Cold-shock protein, DNA-binding CS348_09760 IPR012340 Nucleic acid-binding, OB-fold CS348_09760 IPR011129 Cold shock domain CS348_09760 IPR019844 Cold-shock (CSD) domain CS348_09760 IPR012156 Cold shock, CspA CS348_09770 IPR023614 Porin domain superfamily CS348_09770 IPR001897 Porin, gammaproteobacterial CS348_09770 IPR001702 Porin, Gram-negative type CS348_09770 IPR013793 Porin, Gram-negative type, conserved site CS348_09770 IPR033900 Porin domain, Gram-negative type CS348_09780 IPR006674 HD domain CS348_09780 IPR003607 HD/PDEase domain CS348_09785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_09785 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CS348_09785 IPR001525 C-5 cytosine methyltransferase CS348_09785 IPR040743 DNA methylase N-terminal domain CS348_09785 IPR018117 DNA methylase, C-5 cytosine-specific, active site CS348_09790 IPR011335 Restriction endonuclease type II-like CS348_09790 IPR004603 DNA mismatch endonuclease vsr CS348_09795 IPR000620 EamA domain CS348_09795 IPR004779 Carboxylate/Amino Acid/Amine Transporter CS348_09800 IPR008526 Inner membrane protein YedI CS348_09805 IPR019226 Protein of unknown function DUF2158 CS348_09810 IPR000160 GGDEF domain CS348_09810 IPR029787 Nucleotide cyclase CS348_09810 IPR033416 Periplasmic sensor domain CHASE7 CS348_09815 IPR023214 HAD superfamily CS348_09815 IPR006379 HAD-superfamily hydrolase, subfamily IIB CS348_09815 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP CS348_09815 IPR036412 HAD-like superfamily CS348_09815 IPR012815 Mannosyl-3-phosphoglycerate phosphatase CS348_09820 IPR019669 Uncharacterised bacterial stress protein YodD CS348_09825 IPR019717 Dextransucrase DSRB CS348_09830 IPR000792 Transcription regulator LuxR, C-terminal CS348_09830 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_09830 IPR030866 Transcriptional regulatory protein RcsA CS348_09830 IPR016032 Signal transduction response regulator, C-terminal effector CS348_09835 IPR006303 Flagellar biosynthesis protein FliR CS348_09835 IPR002010 Type III secretion system inner membrane R protein CS348_09840 IPR002191 Bacterial export protein family 3 CS348_09840 IPR006305 Flagellar biosynthesis protein FliQ CS348_09845 IPR005838 Type III secretion system inner membrane P protein CS348_09845 IPR005837 Flagellar transport protein FliP CS348_09850 IPR022781 Flagellar biosynthesis protein, FliO CS348_09855 IPR001543 Surface presentation of antigen (SpoA) CS348_09855 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CS348_09855 IPR031576 Flagellar motor switch protein FliN, N-terminal CS348_09855 IPR036429 SpoA-like superfamily CS348_09855 IPR012826 Flagellar motor switch FliN CS348_09860 IPR001543 Surface presentation of antigen (SpoA) CS348_09860 IPR001689 Flagellar motor switch protein FliM CS348_09860 IPR036429 SpoA-like superfamily CS348_09860 IPR028976 CheC-like superfamily CS348_09865 IPR005503 Flagellar basal body-associated protein FliL CS348_09870 IPR001635 Flagellar hook-length control protein FliK CS348_09870 IPR021136 Flagellar hook-length control protein-like, C-terminal CS348_09870 IPR038610 FliK-like, C-terminal domain superfamily CS348_09875 IPR018006 Flagellar FliJ, proteobacteria CS348_09875 IPR012823 Flagellar export FliJ CS348_09880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_09880 IPR040627 T3SS EscN ATPase, C-terminal CS348_09880 IPR005714 ATPase, type III secretion system, FliI/YscN CS348_09880 IPR032463 ATPase, type III secretion system, FliI CS348_09880 IPR020005 Flagellar export ATPase FliI, clade 1 CS348_09880 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CS348_09880 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CS348_09880 IPR003593 AAA+ ATPase domain CS348_09885 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CS348_09885 IPR000563 Flagellar assembly protein FliH CS348_09890 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CS348_09890 IPR000090 Flagellar motor switch protein FliG CS348_09890 IPR032779 Flagellar motor switch protein FliG, middle domain CS348_09890 IPR011002 Flagellar motor switch protein FliG, alpha-helical CS348_09890 IPR023087 Flagellar motor switch protein FliG, C-terminal CS348_09895 IPR013556 Flagellar M-ring C-terminal CS348_09895 IPR000067 Flagellar M-ring protein FliF CS348_09895 IPR006182 Secretory protein YscJ/FliF CS348_09900 IPR001624 Flagellar hook-basal body complex protein FliE CS348_09910 IPR001455 TusA-like domain CS348_09910 IPR036868 TusA-like domain superfamily CS348_09915 IPR007272 Sulphur transport domain CS348_09920 IPR038624 YedD-like superfamily CS348_09920 IPR025596 YedD-like protein CS348_09925 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta CS348_09925 IPR013776 Alpha-amylase, thermostable CS348_09925 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CS348_09925 IPR013780 Glycosyl hydrolase, all-beta CS348_09925 IPR017853 Glycoside hydrolase superfamily CS348_09930 IPR008622 Flagellar protein FliT CS348_09935 IPR003713 Flagellar protein FliS CS348_09935 IPR036584 Flagellar protein FliS superfamily CS348_09940 IPR010810 Flagellin hook, IN motif CS348_09940 IPR040026 Flagellar hook-associated protein 2 CS348_09940 IPR003481 Flagellar hook-associated protein 2, N-terminal CS348_09940 IPR010809 Flagellar hook-associated protein 2, C-terminal CS348_09945 IPR001492 Flagellin CS348_09945 IPR001029 Flagellin, D0/D1 domain CS348_09945 IPR014981 Flagellin D3 CS348_09955 IPR013324 RNA polymerase sigma factor, region 3/4-like CS348_09955 IPR013325 RNA polymerase sigma factor, region 2 CS348_09955 IPR012845 RNA polymerase sigma factor, FliA/WhiG CS348_09955 IPR007630 RNA polymerase sigma-70 region 4 CS348_09955 IPR007624 RNA polymerase sigma-70 region 3 CS348_09955 IPR007627 RNA polymerase sigma-70 region 2 CS348_09955 IPR000943 RNA polymerase sigma-70 CS348_09955 IPR014284 RNA polymerase sigma-70 like domain CS348_09955 IPR028617 RNA polymerase sigma factor FliA CS348_09960 IPR022523 Flagellar regulator, FliZ CS348_09960 IPR004107 Integrase, SAM-like, N-terminal CS348_09970 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CS348_09970 IPR005966 D-cysteine desulfhydrase CS348_09970 IPR023702 D-cysteine desulphhydrase, bacterial CS348_09970 IPR001926 Pyridoxal-phosphate dependent enzyme CS348_09970 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CS348_09985 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_09985 IPR000792 Transcription regulator LuxR, C-terminal CS348_09985 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily CS348_09985 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CS348_09985 IPR016032 Signal transduction response regulator, C-terminal effector CS348_10000 IPR016032 Signal transduction response regulator, C-terminal effector CS348_10000 IPR011006 CheY-like superfamily CS348_10000 IPR001789 Signal transduction response regulator, receiver domain CS348_10000 IPR000792 Transcription regulator LuxR, C-terminal CS348_10005 IPR035901 GIY-YIG endonuclease superfamily CS348_10005 IPR001162 UvrC family homology region CS348_10005 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CS348_10005 IPR010994 RuvA domain 2-like CS348_10005 IPR000305 GIY-YIG endonuclease CS348_10005 IPR038476 UvrC homology region 2 superfamily CS348_10005 IPR004791 UvrABC system, subunit C CS348_10005 IPR036876 UVR domain superfamily CS348_10005 IPR001943 UVR domain CS348_10010 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CS348_10010 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial CS348_10010 IPR000462 CDP-alcohol phosphatidyltransferase CS348_10045 IPR011978 Uncharacterised protein family UPF0149 CS348_10045 IPR036255 YgfB-like superfamily CS348_10045 IPR004027 SEC-C motif CS348_10050 IPR018227 Amino acid/polyamine transporter 2 CS348_10050 IPR013061 Tryptophan/tryrosine permease, conserved site CS348_10050 IPR013059 Tryptophan/tyrosine transporter CS348_10055 IPR019620 Putative metal-binding protein CS348_10060 IPR012347 Ferritin-like CS348_10060 IPR009078 Ferritin-like superfamily CS348_10060 IPR008331 Ferritin/DPS protein domain CS348_10060 IPR041719 Ferritin, prokaryotic-type CS348_10060 IPR009040 Ferritin-like diiron domain CS348_10060 IPR001519 Ferritin CS348_10065 IPR025731 YecR-like lipoprotein CS348_10075 IPR041719 Ferritin, prokaryotic-type CS348_10075 IPR008331 Ferritin/DPS protein domain CS348_10075 IPR009078 Ferritin-like superfamily CS348_10075 IPR009040 Ferritin-like diiron domain CS348_10075 IPR012347 Ferritin-like CS348_10075 IPR001519 Ferritin CS348_10090 IPR003337 Trehalose-phosphatase CS348_10090 IPR036412 HAD-like superfamily CS348_10090 IPR023214 HAD superfamily CS348_10090 IPR006379 HAD-superfamily hydrolase, subfamily IIB CS348_10095 IPR012766 Alpha,alpha-trehalose-phosphate synthase CS348_10095 IPR001830 Glycosyl transferase, family 20 CS348_10100 IPR006016 UspA CS348_10100 IPR006015 Universal stress protein A family CS348_10100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_10110 IPR023559 Flagellar transcriptional activator FlhD CS348_10110 IPR036194 Flagellar transcriptional activator FlhD superfamily CS348_10115 IPR007944 Flagellar transcriptional activator FlhC CS348_10120 IPR000540 Flagellar motor protein MotA, conserved site CS348_10120 IPR002898 MotA/TolQ/ExbB proton channel CS348_10120 IPR022522 Flagellar motor stator, MotA CS348_10125 IPR036737 OmpA-like domain superfamily CS348_10125 IPR006665 OmpA-like domain CS348_10125 IPR025713 Motility protein B, N-terminal domain CS348_10130 IPR015162 CheY binding CS348_10130 IPR002545 CheW-like domain CS348_10130 IPR035891 CheY-binding domain of CheA CS348_10130 IPR003594 Histidine kinase/HSP90-like ATPase CS348_10130 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CS348_10130 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_10130 IPR036061 CheW-like domain superfamily CS348_10130 IPR005467 Histidine kinase domain CS348_10130 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_10130 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_10130 IPR004105 Histidine kinase CheA-like, homodimeric domain CS348_10130 IPR036641 HPT domain superfamily CS348_10130 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CS348_10135 IPR036061 CheW-like domain superfamily CS348_10135 IPR002545 CheW-like domain CS348_10135 IPR039315 Chemotaxis protein CheW CS348_10140 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CS348_10140 IPR004090 Chemotaxis methyl-accepting receptor CS348_10140 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CS348_10140 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CS348_10140 IPR003660 HAMP domain CS348_10140 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CS348_10145 IPR026024 Chemotaxis protein methyltransferase CheR CS348_10145 IPR000780 MCP methyltransferase, CheR-type CS348_10145 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CS348_10145 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily CS348_10145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_10145 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CS348_10150 IPR011006 CheY-like superfamily CS348_10150 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CS348_10150 IPR035909 Methylesterase CheB, C-terminal CS348_10150 IPR001789 Signal transduction response regulator, receiver domain CS348_10150 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CS348_10155 IPR001789 Signal transduction response regulator, receiver domain CS348_10155 IPR011006 CheY-like superfamily CS348_10160 IPR007439 Chemotaxis phosphatase, CheZ CS348_10165 IPR006135 Type III secretion system substrate exporter CS348_10165 IPR029025 Type III secretion system substrate exporter, C-terminal CS348_10165 IPR006136 Flagellar biosynthetic protein FlhB CS348_10170 IPR042193 FHIPEP, domain 3 CS348_10170 IPR042194 FHIPEP, domain 1 CS348_10170 IPR025505 FHIPEP conserved site CS348_10170 IPR006301 Flagellar biosynthesis protein FlhA CS348_10170 IPR001712 Type III secretion system FHIPEP CS348_10170 IPR042196 FHIPEP, domain 4 CS348_10175 IPR009420 Flagellar protein FlhE CS348_10180 IPR010905 Glycosyl hydrolase, family 88 CS348_10180 IPR012341 Six-hairpin glycosidase-like superfamily CS348_10180 IPR008928 Six-hairpin glycosidase superfamily CS348_10185 IPR001460 Penicillin-binding protein, transpeptidase CS348_10185 IPR012338 Beta-lactamase/transpeptidase-like CS348_10185 IPR005311 Penicillin-binding protein, dimerisation domain CS348_10185 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CS348_10185 IPR017790 Penicillin-binding protein 2 CS348_10190 IPR005148 Arginyl tRNA synthetase N-terminal domain CS348_10190 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CS348_10190 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CS348_10190 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CS348_10190 IPR008909 DALR anticodon binding CS348_10190 IPR001278 Arginine-tRNA ligase CS348_10190 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CS348_10190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_10195 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CS348_10195 IPR010393 Protein of unknown function DUF991 CS348_10200 IPR023648 Copper homeostasis CutC domain CS348_10200 IPR005627 Copper homeostasis protein CutC CS348_10200 IPR036822 Copper homeostasis (CutC) domain superfamily CS348_10210 IPR010017 tRNA U34 carboxymethyltransferase CS348_10210 IPR027555 tRNA (mo5U34)-methyltransferase-like CS348_10210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_10215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_10215 IPR041698 Methyltransferase domain 25 CS348_10215 IPR005271 Carboxy-S-adenosyl-L-methionine synthase CS348_10220 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily CS348_10220 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CS348_10225 IPR002763 Protein of unknown function DUF72 CS348_10225 IPR036520 UPF0759 superfamily CS348_10230 IPR036380 Isochorismatase-like superfamily CS348_10230 IPR000868 Isochorismatase-like CS348_10235 IPR004115 GAD-like domain superfamily CS348_10235 IPR029351 GAD domain CS348_10235 IPR006195 Aminoacyl-tRNA synthetase, class II CS348_10235 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CS348_10235 IPR004524 Aspartate-tRNA ligase, type 1 CS348_10235 IPR012340 Nucleic acid-binding, OB-fold CS348_10235 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CS348_10235 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CS348_10240 IPR003564 Dihydroneopterin triphosphate diphosphatase CS348_10240 IPR015797 NUDIX hydrolase-like domain superfamily CS348_10240 IPR020084 NUDIX hydrolase, conserved site CS348_10240 IPR000086 NUDIX hydrolase domain CS348_10245 IPR026564 Transcriptional regulator TACO1-like, domain 3 CS348_10245 IPR029072 YebC-like CS348_10245 IPR017856 Integrase-like, N-terminal CS348_10245 IPR002876 Transcriptional regulator TACO1-like CS348_10250 IPR036397 Ribonuclease H superfamily CS348_10250 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CS348_10250 IPR002176 Crossover junction endodeoxyribonuclease RuvC CS348_10250 IPR012337 Ribonuclease H-like superfamily CS348_10255 IPR038765 Papain-like cysteine peptidase superfamily CS348_10255 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CS348_10265 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CS348_10265 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CS348_10265 IPR036267 RuvA, C-terminal domain superfamily CS348_10265 IPR012340 Nucleic acid-binding, OB-fold CS348_10265 IPR000085 Bacterial DNA recombination protein RuvA CS348_10265 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CS348_10265 IPR010994 RuvA domain 2-like CS348_10270 IPR003593 AAA+ ATPase domain CS348_10270 IPR041445 RuvB, AAA lid domain CS348_10270 IPR004605 DNA helicase, Holliday junction RuvB-type CS348_10270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_10270 IPR008824 RuvB-like P-loop domain CS348_10270 IPR008823 RuvB C-terminal winged helix domain CS348_10270 IPR036390 Winged helix DNA-binding domain superfamily CS348_10270 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_10275 IPR037294 ABC transporter, BtuC-like CS348_10275 IPR001626 ABC transporter, TroCD-like CS348_10280 IPR003593 AAA+ ATPase domain CS348_10280 IPR003439 ABC transporter-like CS348_10280 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_10280 IPR017882 Zinc import ATP-binding protein ZnuC CS348_10285 IPR006128 Adhesion lipoprotein CS348_10285 IPR006127 Periplasmic solute binding protein, ZnuA-like CS348_10285 IPR035520 High-affinity zinc uptake system protein ZnuA CS348_10290 IPR013731 Opacity-associated protein A, N-terminal CS348_10290 IPR011055 Duplicated hybrid motif CS348_10290 IPR018392 LysM domain CS348_10290 IPR016047 Peptidase M23 CS348_10300 IPR004960 Bacterial lipid A biosynthesis acyltransferase CS348_10300 IPR011921 Lipid A biosynthesis myristoyltransferase CS348_10305 IPR040442 Pyruvate kinase-like domain superfamily CS348_10305 IPR011037 Pyruvate kinase-like, insert domain superfamily CS348_10305 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_10305 IPR018209 Pyruvate kinase, active site CS348_10305 IPR036918 Pyruvate kinase, C-terminal domain superfamily CS348_10305 IPR001697 Pyruvate kinase CS348_10305 IPR015806 Pyruvate kinase, insert domain superfamily CS348_10305 IPR015795 Pyruvate kinase, C-terminal CS348_10305 IPR015793 Pyruvate kinase, barrel CS348_10310 IPR000281 Helix-turn-helix protein RpiR CS348_10310 IPR035472 RpiR-like, SIS domain CS348_10310 IPR009057 Homeobox-like domain superfamily CS348_10310 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_10310 IPR001347 Sugar isomerase (SIS) CS348_10320 IPR001282 Glucose-6-phosphate dehydrogenase CS348_10320 IPR019796 Glucose-6-phosphate dehydrogenase, active site CS348_10320 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CS348_10320 IPR036291 NAD(P)-binding domain superfamily CS348_10320 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CS348_10325 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CS348_10325 IPR037237 IlvD/EDD, N-terminal domain CS348_10325 IPR004786 6-phosphogluconate dehydratase CS348_10325 IPR042096 Dihydroxy-acid dehydratase, C-terminal CS348_10325 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CS348_10330 IPR000887 KDPG/KHG aldolase CS348_10330 IPR013785 Aldolase-type TIM barrel CS348_10330 IPR031337 KDPG/KHG aldolase, active site 1 CS348_10330 IPR031338 KDPG/KHG aldolase, active site 2 CS348_10335 IPR011054 Rudiment single hybrid motif CS348_10335 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase CS348_10335 IPR016185 Pre-ATP-grasp domain superfamily CS348_10335 IPR013815 ATP-grasp fold, subdomain 1 CS348_10335 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CS348_10335 IPR011761 ATP-grasp fold CS348_10340 IPR009813 Uncharacterised protein family YebG CS348_10340 IPR038627 YebG-like superfamily CS348_10345 IPR038703 YebF/Cmi superfamily CS348_10345 IPR020236 Uncharacterised protein family YebF CS348_10345 IPR025603 YebF/Colicin-M immunity protein CS348_10350 IPR007486 Inner membrane protein YebE CS348_10350 IPR029024 TerB-like CS348_10355 IPR002470 Peptidase S9A, prolyl oligopeptidase CS348_10355 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CS348_10355 IPR023302 Peptidase S9A, N-terminal domain CS348_10355 IPR002471 Peptidase S9, serine active site CS348_10355 IPR029058 Alpha/Beta hydrolase fold CS348_10360 IPR013520 Exonuclease, RNase T/DNA polymerase III CS348_10360 IPR012337 Ribonuclease H-like superfamily CS348_10360 IPR036397 Ribonuclease H superfamily CS348_10365 IPR036526 Carbon-nitrogen hydrolase superfamily CS348_10365 IPR003010 Carbon-nitrogen hydrolase CS348_10370 IPR036745 DNA polymerase III-theta superfamily CS348_10370 IPR009052 DNA polymerase III-theta, bacterial CS348_10375 IPR007348 CopC domain CS348_10375 IPR014756 Immunoglobulin E-set CS348_10375 IPR032694 Copper transport protein C/D CS348_10380 IPR008457 Copper resistance protein D CS348_10380 IPR032694 Copper transport protein C/D CS348_10385 IPR019648 Protein of unknown function DUF2511 CS348_10410 IPR019659 Protein of unknown function DUF2514 CS348_10435 IPR037053 Phage tail collar domain superfamily CS348_10435 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 CS348_10435 IPR011083 Phage tail collar domain CS348_10445 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CS348_10460 IPR000802 Arsenical pump membrane protein, ArsB CS348_10485 IPR000620 EamA domain CS348_10515 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CS348_10520 IPR016181 Acyl-CoA N-acyltransferase CS348_10520 IPR000182 GNAT domain CS348_10530 IPR009833 Uncharacterised protein DUF1398 CS348_10530 IPR036696 YdfO-like superfamily CS348_10535 IPR016019 Guanine nucleotide exchange factor SopE, GEF domain CS348_10535 IPR016018 Guanine nucleotide exchange factor SopE, N-terminal domain CS348_10535 IPR005414 Guanine nucleotide exchange factor SopE CS348_10535 IPR035949 SopE-like, GEF domain superfamily CS348_10545 IPR029052 Metallo-dependent phosphatase-like CS348_10545 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CS348_10545 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase CS348_10550 IPR009954 Protein of unknown function DUF1482 CS348_10555 IPR009950 Protein of unknown function DUF1480 CS348_10560 IPR023545 rRNA small subunit methyltransferase F CS348_10560 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal CS348_10560 IPR023267 RNA (C5-cytosine) methyltransferase CS348_10560 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CS348_10560 IPR011023 Nop2p CS348_10560 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CS348_10560 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain CS348_10560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_10565 IPR003399 Mce/MlaD CS348_10570 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type CS348_10570 IPR011031 Multihaem cytochrome CS348_10570 IPR007498 Intermembrane transport protein PqiA-like CS348_10575 IPR003018 GAF domain CS348_10575 IPR000614 Free Met sulfoxide reductase conserved site CS348_10575 IPR029016 GAF-like domain superfamily CS348_10580 IPR023529 RNA chaperone ProQ CS348_10580 IPR035236 RNA chaperone ProQ, C-terminal CS348_10580 IPR016103 ProQ/FinO domain CS348_10580 IPR036442 ProQ/FinO domain superfamily CS348_10585 IPR029045 ClpP/crotonase-like domain superfamily CS348_10585 IPR040573 Tail specific protease, N-terminal domain CS348_10585 IPR020992 Tail specific protease, C-terminal CS348_10585 IPR005151 Tail specific protease CS348_10585 IPR004447 C-terminal-processing peptidase S41A CS348_10585 IPR001478 PDZ domain CS348_10585 IPR036034 PDZ superfamily CS348_10590 IPR022919 Peptidase M48, protease HtpX, putative CS348_10590 IPR001915 Peptidase M48 CS348_10595 IPR011701 Major facilitator superfamily CS348_10595 IPR020846 Major facilitator superfamily domain CS348_10595 IPR036259 MFS transporter superfamily CS348_10600 IPR036390 Winged helix DNA-binding domain superfamily CS348_10600 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_10600 IPR029016 GAF-like domain superfamily CS348_10600 IPR011991 ArsR-like helix-turn-helix domain CS348_10600 IPR005471 Transcription regulator IclR, N-terminal CS348_10600 IPR014757 Transcription regulator IclR, C-terminal CS348_10605 IPR025611 YobH-like protein CS348_10610 IPR020907 PhoP/PhoQ regulator MgrB CS348_10615 IPR025594 YebO-like protein CS348_10620 IPR019672 Protein of unknown function DUF2627 CS348_10625 IPR011129 Cold shock domain CS348_10625 IPR012340 Nucleic acid-binding, OB-fold CS348_10625 IPR002059 Cold-shock protein, DNA-binding CS348_10625 IPR019844 Cold-shock (CSD) domain CS348_10625 IPR012156 Cold shock, CspA CS348_10630 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CS348_10630 IPR001460 Penicillin-binding protein, transpeptidase CS348_10630 IPR005311 Penicillin-binding protein, dimerisation domain CS348_10630 IPR012338 Beta-lactamase/transpeptidase-like CS348_10630 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CS348_10635 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted CS348_10635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_10635 IPR025714 Methyltransferase domain CS348_10640 IPR003810 Putative manganese efflux pump CS348_10640 IPR022929 Putative manganese efflux pump MntP CS348_10650 IPR009328 Protein of unknown function DUF986 CS348_10655 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CS348_10660 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit CS348_10665 IPR004701 Phosphotransferase system, mannose-type IIA component CS348_10665 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CS348_10665 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily CS348_10665 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CS348_10665 IPR033887 PTS system mannose/sorbose specific IIA subunit CS348_10665 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CS348_10665 IPR013789 Phosphotransferase system, mannose family IIA component CS348_10675 IPR000644 CBS domain CS348_10675 IPR036318 FAD-binding, type PCMH-like superfamily CS348_10675 IPR005496 Integral membrane protein TerC CS348_10675 IPR016169 FAD-binding, type PCMH, subdomain 2 CS348_10675 IPR005170 Transporter-associated domain CS348_10680 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CS348_10680 IPR001633 EAL domain CS348_10680 IPR035919 EAL domain superfamily CS348_10685 IPR029009 Allosteric substrate binding domain superfamily CS348_10685 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CS348_10685 IPR005130 Serine dehydratase-like, alpha subunit CS348_10685 IPR005131 Serine dehydratase beta chain CS348_10690 IPR000059 NUDIX hydrolase, NudL, conserved site CS348_10690 IPR023735 Uncharacterised nudix hydrolase NudL CS348_10690 IPR015797 NUDIX hydrolase-like domain superfamily CS348_10690 IPR000086 NUDIX hydrolase domain CS348_10695 IPR005802 Aminodeoxychorismate synthase, component I CS348_10695 IPR019999 Anthranilate synthase component I-like CS348_10695 IPR006805 Anthranilate synthase component I, N-terminal CS348_10695 IPR015890 Chorismate-utilising enzyme, C-terminal CS348_10695 IPR005801 ADC synthase CS348_10700 IPR005371 Uncharacterised protein family UPF0181 CS348_10705 IPR035709 RutC family, YoaB-like CS348_10705 IPR035959 RutC-like superfamily CS348_10705 IPR006175 YjgF/YER057c/UK114 family CS348_10705 IPR019897 RidA, conserved site CS348_10710 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_10710 IPR006935 Helicase/UvrB, N-terminal CS348_10710 IPR006555 ATP-dependent helicase, C-terminal CS348_10710 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CS348_10710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_10715 IPR000905 Gcp-like domain CS348_10715 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB CS348_10720 IPR004658 Outer membrane lipoprotein Slp CS348_10730 IPR042099 AMP-dependent synthetase-like superfamily CS348_10730 IPR000873 AMP-dependent synthetase/ligase CS348_10730 IPR020845 AMP-binding, conserved site CS348_10730 IPR025110 AMP-binding enzyme, C-terminal domain CS348_10735 IPR006292 Ribonuclease D CS348_10735 IPR012337 Ribonuclease H-like superfamily CS348_10735 IPR010997 HRDC-like superfamily CS348_10735 IPR002121 HRDC domain CS348_10735 IPR002562 3'-5' exonuclease domain CS348_10735 IPR036397 Ribonuclease H superfamily CS348_10740 IPR036707 Cell division topological specificity factor MinE superfamily CS348_10740 IPR005527 Cell division topological specificity factor MinE CS348_10745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_10745 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CS348_10745 IPR010223 ATP binding protein MinD, bacterial-type CS348_10745 IPR025501 ATP binding protein MinD CS348_10750 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily CS348_10750 IPR013033 Septum formation inhibitor MinC CS348_10750 IPR007874 Septum formation inhibitor MinC, N-terminal CS348_10750 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily CS348_10750 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CS348_10750 IPR005526 Septum formation inhibitor MinC, C-terminal CS348_10755 IPR038068 YcgL-like superfamily CS348_10755 IPR027354 YcgL domain CS348_10760 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CS348_10760 IPR011234 Fumarylacetoacetase-like, C-terminal CS348_10765 IPR005358 Putative zinc- or iron-chelating domain containing protein CS348_10765 IPR008228 Uncharacterised conserved protein UCP006173 CS348_10775 IPR012563 Gns CS348_10785 IPR003752 Disulphide bond formation protein DsbB/BdbC CS348_10785 IPR023380 DsbB-like superfamily CS348_10785 IPR022920 Disulphide bond formation protein DsbB CS348_10790 IPR004671 Na+/H+ antiporter NhaB CS348_10795 IPR014178 Fatty acid response transcription factor FadR CS348_10795 IPR000524 Transcription regulator HTH, GntR CS348_10795 IPR008920 Transcription regulator FadR/GntR, C-terminal CS348_10795 IPR036390 Winged helix DNA-binding domain superfamily CS348_10795 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_10795 IPR028374 FadR, C-terminal domain CS348_10800 IPR007390 Sporulation stage V, protein R CS348_10805 IPR006076 FAD dependent oxidoreductase CS348_10805 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_10805 IPR023080 D-amino acid dehydrogenase DadA CS348_10810 IPR001608 Alanine racemase, N-terminal CS348_10810 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CS348_10810 IPR000821 Alanine racemase CS348_10810 IPR011079 Alanine racemase, C-terminal CS348_10810 IPR029066 PLP-binding barrel CS348_10810 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CS348_10815 IPR005170 Transporter-associated domain CS348_10815 IPR023729 K(+)/H(+) antiporter NhaP2 CS348_10815 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CS348_10815 IPR006037 Regulator of K+ conductance, C-terminal CS348_10815 IPR038770 Sodium/solute symporter superfamily CS348_10815 IPR036318 FAD-binding, type PCMH-like superfamily CS348_10815 IPR006153 Cation/H+ exchanger CS348_10815 IPR030151 K(+)/H(+) antiporter NhaP CS348_10815 IPR016169 FAD-binding, type PCMH, subdomain 2 CS348_10820 IPR040449 LD-carboxypeptidase, N-terminal CS348_10820 IPR003507 Peptidase family S66 CS348_10820 IPR040921 LD-carboxypeptidase, C-terminal CS348_10820 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CS348_10820 IPR029062 Class I glutamine amidotransferase-like CS348_10820 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal CS348_10825 IPR000189 Prokaryotic transglycosylase, active site CS348_10825 IPR008258 Transglycosylase SLT domain 1 CS348_10825 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A CS348_10825 IPR023346 Lysozyme-like domain superfamily CS348_10830 IPR012349 FMN-binding split barrel CS348_10830 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CS348_10830 IPR009875 PilZ domain CS348_10830 IPR023787 Type III secretion system flagellar brake protein YcgR CS348_10835 IPR007341 Transglycosylase-associated protein CS348_10840 IPR023720 Trehalase, periplasmic CS348_10840 IPR001661 Glycoside hydrolase, family 37 CS348_10840 IPR018232 Glycoside hydrolase, family 37, conserved site CS348_10840 IPR008928 Six-hairpin glycosidase superfamily CS348_10840 IPR012341 Six-hairpin glycosidase-like superfamily CS348_10845 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CS348_10845 IPR014362 Glutamate dehydrogenase CS348_10845 IPR036291 NAD(P)-binding domain superfamily CS348_10845 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CS348_10845 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CS348_10845 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CS348_10845 IPR033524 Leu/Phe/Val dehydrogenases active site CS348_10850 IPR012994 Membrane bound YbgT-like CS348_10855 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CS348_10860 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CS348_10865 IPR038527 HupH, C-terminal domain superfamily CS348_10865 IPR006894 HupH hydrogenase expression protein, C-terminal CS348_10870 IPR036249 Thioredoxin-like superfamily CS348_10870 IPR010893 [NiFe]-hydrogenase maturation factor HyaE CS348_10875 IPR023430 Peptidase HybD-like domain superfamily CS348_10875 IPR000671 Peptidase A31 family CS348_10875 IPR004419 Peptidase A31, hydrogenase expression/formation protein CS348_10880 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit CS348_10880 IPR016174 Di-haem cytochrome, transmembrane CS348_10880 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CS348_10885 IPR001501 Nickel-dependent hydrogenase, large subunit CS348_10885 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site CS348_10885 IPR029014 [NiFe]-hydrogenase, large subunit CS348_10890 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_10890 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CS348_10890 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_10890 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily CS348_10890 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily CS348_10890 IPR001821 [NiFe]-hydrogenase, small subunit CS348_10890 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CS348_10905 IPR012675 Beta-grasp domain superfamily CS348_10905 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CS348_10905 IPR006073 GTP binding domain CS348_10905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_10905 IPR004095 TGS CS348_10905 IPR012676 TGS-like CS348_10905 IPR023192 TGS-like domain superfamily CS348_10905 IPR013029 YchF, C-terminal domain CS348_10905 IPR031167 OBG-type guanine nucleotide-binding (G) domain CS348_10905 IPR041706 YchF, N-terminal CS348_10910 IPR001328 Peptidyl-tRNA hydrolase CS348_10910 IPR018171 Peptidyl-tRNA hydrolase, conserved site CS348_10910 IPR036416 Peptidyl-tRNA hydrolase superfamily CS348_10915 IPR019698 Protein of unknown function DUF2583 CS348_10920 IPR018045 Sulphate anion transporter, conserved site CS348_10920 IPR011547 SLC26A/SulP transporter domain CS348_10920 IPR001902 SLC26A/SulP transporter CS348_10920 IPR002645 STAS domain CS348_10920 IPR036513 STAS domain superfamily CS348_10925 IPR005946 Ribose-phosphate pyrophosphokinase CS348_10925 IPR029057 Phosphoribosyltransferase-like CS348_10925 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CS348_10925 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CS348_10925 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CS348_10925 IPR000836 Phosphoribosyltransferase domain CS348_10930 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_10930 IPR006204 GHMP kinase N-terminal domain CS348_10930 IPR036554 GHMP kinase, C-terminal domain superfamily CS348_10930 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CS348_10930 IPR013750 GHMP kinase, C-terminal domain CS348_10930 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_10935 IPR004565 Outer membrane lipoprotein LolB CS348_10935 IPR029046 Lipoprotein localisation LolA/LolB/LppX CS348_10940 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CS348_10940 IPR036291 NAD(P)-binding domain superfamily CS348_10940 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CS348_10940 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CS348_10940 IPR018214 Glutamyl-tRNA reductase, conserved site CS348_10940 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CS348_10940 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CS348_10940 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CS348_10945 IPR004373 Peptide chain release factor 1 CS348_10945 IPR005139 Peptide chain release factor CS348_10945 IPR000352 Peptide chain release factor class I CS348_10950 IPR025714 Methyltransferase domain CS348_10950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_10950 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CS348_10950 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CS348_10950 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_10950 IPR004556 Methyltransferase HemK-like CS348_10955 IPR007360 Invasion gene expression up-regulator, SirB CS348_10960 IPR032698 Protein SirB1, N-terminal CS348_10965 IPR006269 3-deoxy-8-phosphooctulonate synthase CS348_10965 IPR006218 DAHP synthetase I/KDSA CS348_10965 IPR013785 Aldolase-type TIM barrel CS348_10970 IPR004837 Sodium/calcium exchanger membrane region CS348_10970 IPR004713 Calcium/proton exchanger CS348_10975 IPR037205 ChaB superfamily CS348_10975 IPR009317 ChaB CS348_10980 IPR027396 DsrEFH-like CS348_10980 IPR003787 Sulphur relay, DsrE/F-like protein CS348_10985 IPR038177 Inverse autotransporter, beta-domain superfamily CS348_10985 IPR024519 Inverse autotransporter, beta-domain CS348_10990 IPR001789 Signal transduction response regulator, receiver domain CS348_10990 IPR016032 Signal transduction response regulator, C-terminal effector CS348_10990 IPR011006 CheY-like superfamily CS348_10990 IPR000792 Transcription regulator LuxR, C-terminal CS348_10990 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_10995 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing CS348_10995 IPR042295 NarX-like, N-terminal domain superfamily CS348_10995 IPR003660 HAMP domain CS348_10995 IPR003594 Histidine kinase/HSP90-like ATPase CS348_10995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_10995 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CS348_10995 IPR029095 NarX-like, N-terminal CS348_10995 IPR005467 Histidine kinase domain CS348_11005 IPR011701 Major facilitator superfamily CS348_11005 IPR036259 MFS transporter superfamily CS348_11005 IPR004737 Nitrate transporter CS348_11010 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_11010 IPR028189 Nitrate reductase, alpha subunit, N-terminal CS348_11010 IPR006468 Nitrate reductase, alpha subunit CS348_11010 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_11010 IPR006657 Molybdopterin dinucleotide-binding domain CS348_11010 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_11010 IPR006656 Molybdopterin oxidoreductase CS348_11010 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_11010 IPR037943 Nitrate reductase alpha subunit-like, MopB domain CS348_11015 IPR006547 Nitrate reductase, beta subunit CS348_11015 IPR038262 Nitrate reductase beta, C-terminal domain superfamily CS348_11015 IPR029263 Respiratory nitrate reductase beta, C-terminal CS348_11015 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_11020 IPR003765 Nitrate reductase chaperone, NarJ CS348_11020 IPR020945 DMSO/Nitrate reductase chaperone CS348_11020 IPR036411 TorD-like superfamily CS348_11020 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 CS348_11020 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 CS348_11025 IPR003816 Nitrate reductase, gamma subunit CS348_11025 IPR036197 NarG-like superfamily CS348_11025 IPR023234 NarG-like domain CS348_11065 IPR002912 ACT domain CS348_11065 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CS348_11065 IPR004810 Formyltetrahydrofolate deformylase CS348_11065 IPR036477 Formyl transferase, N-terminal domain superfamily CS348_11065 IPR002376 Formyl transferase, N-terminal CS348_11070 IPR032710 NTF2-like domain superfamily CS348_11070 IPR004027 SEC-C motif CS348_11070 IPR023006 Uncharacterised protein family UPF0225 CS348_11075 IPR001423 Lysophospholipase patatin, conserved site CS348_11075 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CS348_11075 IPR002641 Patatin-like phospholipase domain CS348_11080 IPR001789 Signal transduction response regulator, receiver domain CS348_11080 IPR028616 Regulator of RpoS CS348_11080 IPR036457 PPM-type phosphatase domain superfamily CS348_11080 IPR011006 CheY-like superfamily CS348_11080 IPR039420 Transcriptional regulatory protein WalR-like CS348_11085 IPR005835 Nucleotidyl transferase domain CS348_11085 IPR029044 Nucleotide-diphospho-sugar transferases CS348_11085 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CS348_11090 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily CS348_11090 IPR027444 Histone-like protein H-NS, C-terminal domain CS348_11090 IPR027454 Histone-like protein H-NS, N-terminal CS348_11090 IPR001801 Histone-like protein H-NS CS348_11095 IPR020633 Thymidine kinase, conserved site CS348_11095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_11095 IPR001267 Thymidine kinase CS348_11100 IPR015590 Aldehyde dehydrogenase domain CS348_11100 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_11100 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain CS348_11100 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CS348_11100 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CS348_11100 IPR039697 Iron-type alcohol dehydrogenase-like CS348_11100 IPR016161 Aldehyde/histidinol dehydrogenase CS348_11100 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase CS348_11100 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_11105 IPR002771 Multiple antibiotic resistance (MarC)-related CS348_11115 IPR000914 Solute-binding protein family 5 domain CS348_11115 IPR039424 Solute-binding protein family 5 CS348_11115 IPR023765 Solute-binding protein family 5, conserved site CS348_11115 IPR030678 Peptide/nickel binding protein, MppA-type CS348_11120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_11120 IPR035906 MetI-like superfamily CS348_11125 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CS348_11125 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_11125 IPR035906 MetI-like superfamily CS348_11130 IPR017871 ABC transporter, conserved site CS348_11130 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CS348_11130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_11130 IPR003593 AAA+ ATPase domain CS348_11130 IPR003439 ABC transporter-like CS348_11135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_11135 IPR003593 AAA+ ATPase domain CS348_11135 IPR003439 ABC transporter-like CS348_11135 IPR017871 ABC transporter, conserved site CS348_11135 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CS348_11140 IPR028325 Voltage-gated potassium channel CS348_11140 IPR018488 Cyclic nucleotide-binding, conserved site CS348_11140 IPR018490 Cyclic nucleotide-binding-like CS348_11140 IPR000595 Cyclic nucleotide-binding domain CS348_11140 IPR005821 Ion transport domain CS348_11140 IPR014710 RmlC-like jelly roll fold CS348_11145 IPR007376 dsDNA mimic, putative CS348_11145 IPR036763 Putative dsDNA mimic superfamily CS348_11150 IPR027379 Cardiolipin synthase N-terminal CS348_11150 IPR025202 Phospholipase D-like domain CS348_11150 IPR022924 Cardiolipin synthase CS348_11150 IPR001736 Phospholipase D/Transphosphatidylase CS348_11150 IPR030840 Cardiolipin synthase A CS348_11160 IPR011008 Dimeric alpha-beta barrel CS348_11160 IPR005545 YCII-related CS348_11165 IPR003538 Gram-negative bacterial TonB protein CS348_11165 IPR006260 TonB/TolA, C-terminal CS348_11165 IPR037682 TonB, C-terminal CS348_11170 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CS348_11170 IPR006683 Thioesterase domain CS348_11170 IPR029069 HotDog domain superfamily CS348_11170 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CS348_11175 IPR006008 Intracellular septation protein A CS348_11180 IPR009627 Uncharacterised protein family UPF0259 CS348_11185 IPR005358 Putative zinc- or iron-chelating domain containing protein CS348_11195 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CS348_11195 IPR005618 Outer membrane protein, OmpW CS348_11200 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain CS348_11200 IPR027407 Manganese catalase, C-terminal CS348_11200 IPR007760 Manganese catalase CS348_11200 IPR009078 Ferritin-like superfamily CS348_11200 IPR012347 Ferritin-like CS348_11205 IPR009078 Ferritin-like superfamily CS348_11205 IPR012347 Ferritin-like CS348_11205 IPR010287 Domain of unknown function DUF892 CS348_11210 IPR012347 Ferritin-like CS348_11210 IPR010287 Domain of unknown function DUF892 CS348_11210 IPR009078 Ferritin-like superfamily CS348_11215 IPR019626 Stress-induced protein, KGG, repeat CS348_11220 IPR018204 Tryptophan synthase, alpha chain, active site CS348_11220 IPR011060 Ribulose-phosphate binding barrel CS348_11220 IPR013785 Aldolase-type TIM barrel CS348_11220 IPR002028 Tryptophan synthase, alpha chain CS348_11225 IPR006654 Tryptophan synthase, beta chain CS348_11225 IPR001926 Pyridoxal-phosphate dependent enzyme CS348_11225 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CS348_11225 IPR023026 Tryptophan synthase beta chain/beta chain-like CS348_11225 IPR006653 Tryptophan synthase, beta chain, conserved site CS348_11230 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CS348_11230 IPR013798 Indole-3-glycerol phosphate synthase CS348_11230 IPR013785 Aldolase-type TIM barrel CS348_11230 IPR011060 Ribulose-phosphate binding barrel CS348_11230 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CS348_11235 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CS348_11235 IPR017926 Glutamine amidotransferase CS348_11235 IPR000312 Glycosyl transferase, family 3 CS348_11235 IPR017459 Glycosyl transferase family 3, N-terminal domain CS348_11235 IPR029062 Class I glutamine amidotransferase-like CS348_11235 IPR005940 Anthranilate phosphoribosyl transferase CS348_11235 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CS348_11235 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CS348_11240 IPR005801 ADC synthase CS348_11240 IPR015890 Chorismate-utilising enzyme, C-terminal CS348_11240 IPR019999 Anthranilate synthase component I-like CS348_11240 IPR006805 Anthranilate synthase component I, N-terminal CS348_11240 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial CS348_11245 IPR013205 Leader peptide, tryptophan-operon CS348_11250 IPR016195 Polymerase/histidinol phosphatase-like CS348_11250 IPR003141 Polymerase/histidinol phosphatase, N-terminal CS348_11250 IPR004013 PHP domain CS348_11255 IPR006070 YrdC-like domain CS348_11255 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CS348_11260 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CS348_11260 IPR006145 Pseudouridine synthase, RsuA/RluA CS348_11260 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CS348_11260 IPR002942 RNA-binding S4 domain CS348_11260 IPR036986 RNA-binding S4 domain superfamily CS348_11260 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_11265 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR CS348_11265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_11270 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_11270 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_11270 IPR036291 NAD(P)-binding domain superfamily CS348_11275 IPR002142 Peptidase S49 CS348_11275 IPR013703 Peptidase S49, N-terminal proteobacteria CS348_11275 IPR029045 ClpP/crotonase-like domain superfamily CS348_11280 IPR019633 Protein of unknown function DUF2498 CS348_11280 IPR038191 YciN superfamily CS348_11290 IPR023405 DNA topoisomerase, type IA, core domain CS348_11290 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CS348_11290 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CS348_11290 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CS348_11290 IPR013498 DNA topoisomerase, type IA, zn finger CS348_11290 IPR006171 TOPRIM domain CS348_11290 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type CS348_11290 IPR034149 DNA topoisomerase 1, TOPRIM domain CS348_11290 IPR000380 DNA topoisomerase, type IA CS348_11290 IPR003601 DNA topoisomerase, type IA, domain 2 CS348_11290 IPR023406 DNA topoisomerase, type IA, active site CS348_11290 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CS348_11290 IPR005733 DNA topoisomerase I, bacterial-type CS348_11290 IPR013497 DNA topoisomerase, type IA, central CS348_11290 IPR028612 DNA topoisomerase I, type IA CS348_11300 IPR000847 Transcription regulator HTH, LysR CS348_11300 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_11300 IPR036390 Winged helix DNA-binding domain superfamily CS348_11300 IPR005119 LysR, substrate-binding CS348_11320 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CS348_11320 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CS348_11320 IPR036008 Aconitase, iron-sulfur domain CS348_11320 IPR018136 Aconitase family, 4Fe-4S cluster binding site CS348_11320 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CS348_11320 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CS348_11320 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CS348_11325 IPR032677 GTP cyclohydrolase II CS348_11325 IPR036144 RibA-like superfamily CS348_11325 IPR000926 GTP cyclohydrolase II, RibA CS348_11330 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CS348_11330 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CS348_11340 IPR010445 Lipopolysaccharide assembly protein A domain CS348_11340 IPR032906 Lipopolysaccharide assembly protein A CS348_11345 IPR030865 Lipopolysaccharide assembly protein B CS348_11345 IPR019734 Tetratricopeptide repeat CS348_11345 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_11345 IPR013026 Tetratricopeptide repeat-containing domain CS348_11345 IPR041166 LapB, rubredoxin metal binding domain CS348_11350 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CS348_11350 IPR001754 Orotidine 5'-phosphate decarboxylase domain CS348_11350 IPR011060 Ribulose-phosphate binding barrel CS348_11350 IPR014732 Orotidine 5'-phosphate decarboxylase CS348_11350 IPR013785 Aldolase-type TIM barrel CS348_11355 IPR005872 Archaeal/bacterial translation initiation factor SUI1 CS348_11355 IPR036877 SUI1 domain superfamily CS348_11355 IPR001950 SUI1 domain CS348_11360 IPR008816 Glycine zipper 2TM domain CS348_11365 IPR014036 DeoR C-terminal sensor domain CS348_11365 IPR001034 DeoR-type HTH domain CS348_11365 IPR037171 NagB/RpiA transferase-like CS348_11365 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_11365 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_11365 IPR036390 Winged helix DNA-binding domain superfamily CS348_11370 IPR020887 Uncharacterised protein family UPF0509 CS348_11375 IPR000160 GGDEF domain CS348_11375 IPR001633 EAL domain CS348_11375 IPR035965 PAS domain superfamily CS348_11375 IPR000014 PAS domain CS348_11375 IPR029787 Nucleotide cyclase CS348_11375 IPR035919 EAL domain superfamily CS348_11385 IPR011129 Cold shock domain CS348_11385 IPR040476 RNase II/RNase R, cold shock domain CS348_11385 IPR011804 Ribonuclease II CS348_11385 IPR001900 Ribonuclease II/R CS348_11385 IPR013223 Ribonuclease B, N-terminal OB domain CS348_11385 IPR012340 Nucleic acid-binding, OB-fold CS348_11385 IPR004476 Ribonuclease II/ribonuclease R CS348_11385 IPR003029 S1 domain CS348_11385 IPR022966 Ribonuclease II/R, conserved site CS348_11390 IPR029032 AhpD-like CS348_11395 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CS348_11395 IPR036291 NAD(P)-binding domain superfamily CS348_11395 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_11420 IPR017871 ABC transporter, conserved site CS348_11420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_11420 IPR003439 ABC transporter-like CS348_11420 IPR003593 AAA+ ATPase domain CS348_11425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_11425 IPR003439 ABC transporter-like CS348_11425 IPR003593 AAA+ ATPase domain CS348_11425 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CS348_11430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_11430 IPR035906 MetI-like superfamily CS348_11430 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CS348_11470 IPR006120 Resolvase, HTH domain CS348_11470 IPR009057 Homeobox-like domain superfamily CS348_11470 IPR006119 Resolvase, N-terminal catalytic domain CS348_11470 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CS348_11470 IPR006118 Recombinase, conserved site CS348_11475 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_11475 IPR035906 MetI-like superfamily CS348_11480 IPR000914 Solute-binding protein family 5 domain CS348_11480 IPR023765 Solute-binding protein family 5, conserved site CS348_11480 IPR039424 Solute-binding protein family 5 CS348_11480 IPR030678 Peptide/nickel binding protein, MppA-type CS348_11485 IPR025944 Sigma-54 interaction domain, conserved site CS348_11485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_11485 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_11485 IPR014317 Transcription activator PspF CS348_11485 IPR002197 DNA binding HTH domain, Fis-type CS348_11485 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CS348_11485 IPR009057 Homeobox-like domain superfamily CS348_11485 IPR003593 AAA+ ATPase domain CS348_11490 IPR014319 Phage shock protein, PspA CS348_11490 IPR007157 PspA/IM30 CS348_11495 IPR009554 Phage shock protein B CS348_11500 IPR007168 Phage shock protein, PspC, N-terminal CS348_11500 IPR014320 Phage shock protein, PspC CS348_11505 IPR014321 Phage shock protein, PspD CS348_11510 IPR001763 Rhodanese-like domain CS348_11510 IPR014323 Phage shock protein, PspE CS348_11510 IPR036873 Rhodanese-like domain superfamily CS348_11515 IPR007413 Protein of unknown function DUF463, YcjX-like protein CS348_11520 IPR021147 Protein of unknown function DUF697 CS348_11520 IPR006507 Uncharacterised protein family UPF0283 CS348_11525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_11525 IPR030828 TyrR family, helix-turn-helix domain CS348_11525 IPR000014 PAS domain CS348_11525 IPR025944 Sigma-54 interaction domain, conserved site CS348_11525 IPR003593 AAA+ ATPase domain CS348_11525 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CS348_11525 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CS348_11525 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_11525 IPR035965 PAS domain superfamily CS348_11525 IPR002912 ACT domain CS348_11525 IPR009057 Homeobox-like domain superfamily CS348_11530 IPR036249 Thioredoxin-like superfamily CS348_11530 IPR013766 Thioredoxin domain CS348_11530 IPR002065 Thiol peroxidase Tpx CS348_11530 IPR018219 Thiol peroxidase conserved site CS348_11530 IPR013740 Redoxin CS348_11535 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CS348_11535 IPR036849 Enolase-like, C-terminal domain superfamily CS348_11535 IPR029017 Enolase-like, N-terminal CS348_11535 IPR029065 Enolase C-terminal domain-like CS348_11535 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CS348_11535 IPR034603 Dipeptide epimerase CS348_11535 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CS348_11540 IPR000834 Peptidase M14, carboxypeptidase A CS348_11545 IPR039424 Solute-binding protein family 5 CS348_11545 IPR030678 Peptide/nickel binding protein, MppA-type CS348_11545 IPR000914 Solute-binding protein family 5 domain CS348_11545 IPR023765 Solute-binding protein family 5, conserved site CS348_11555 IPR036390 Winged helix DNA-binding domain superfamily CS348_11555 IPR000847 Transcription regulator HTH, LysR CS348_11555 IPR005119 LysR, substrate-binding CS348_11555 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_11560 IPR036812 NADP-dependent oxidoreductase domain superfamily CS348_11560 IPR023210 NADP-dependent oxidoreductase domain CS348_11560 IPR020471 Aldo/keto reductase CS348_11560 IPR018170 Aldo/keto reductase, conserved site CS348_11565 IPR036291 NAD(P)-binding domain superfamily CS348_11565 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_11565 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_11570 IPR001647 DNA-binding HTH domain, TetR-type CS348_11570 IPR009057 Homeobox-like domain superfamily CS348_11570 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CS348_11570 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_11585 IPR009057 Homeobox-like domain superfamily CS348_11585 IPR020449 Transcription regulator HTH, AraC- type CS348_11585 IPR029442 GyrI-like small molecule binding domain CS348_11585 IPR011256 Regulatory factor, effector binding domain superfamily CS348_11585 IPR018060 DNA binding HTH domain, AraC-type CS348_11585 IPR018062 HTH domain AraC-type, conserved site CS348_11610 IPR018219 Thiol peroxidase conserved site CS348_11610 IPR013766 Thioredoxin domain CS348_11610 IPR002065 Thiol peroxidase Tpx CS348_11610 IPR013740 Redoxin CS348_11610 IPR036249 Thioredoxin-like superfamily CS348_11630 IPR006685 Mechanosensitive ion channel MscS CS348_11630 IPR023408 Mechanosensitive ion channel MscS domain superfamily CS348_11630 IPR006686 Mechanosensitive ion channel MscS, conserved site CS348_11630 IPR011066 Mechanosensitive ion channel MscS, C-terminal CS348_11630 IPR010920 LSM domain superfamily CS348_11630 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CS348_11635 IPR019685 Protein of unknown function DUF2534 CS348_11640 IPR006016 UspA CS348_11645 IPR036390 Winged helix DNA-binding domain superfamily CS348_11645 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_11645 IPR018335 Transcription regulator HTH, Crp-type, conserved site CS348_11645 IPR014710 RmlC-like jelly roll fold CS348_11645 IPR012318 Crp-type HTH domain CS348_11645 IPR000595 Cyclic nucleotide-binding domain CS348_11645 IPR018490 Cyclic nucleotide-binding-like CS348_11650 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CS348_11650 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CS348_11650 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CS348_11650 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CS348_11650 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CS348_11650 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_11650 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CS348_11655 IPR036063 Smr domain superfamily CS348_11655 IPR002625 Smr domain CS348_11665 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CS348_11665 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CS348_11665 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CS348_11665 IPR004090 Chemotaxis methyl-accepting receptor CS348_11665 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CS348_11665 IPR003660 HAMP domain CS348_11670 IPR023714 Zinc transport protein ZntB CS348_11670 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CS348_11680 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CS348_11680 IPR014014 RNA helicase, DEAD-box type, Q motif CS348_11680 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CS348_11680 IPR001650 Helicase, C-terminal CS348_11680 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_11680 IPR028619 ATP-dependent RNA helicase DbpA CS348_11680 IPR011545 DEAD/DEAH box helicase domain CS348_11680 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CS348_11680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_11685 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type CS348_11685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_11685 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CS348_11685 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase CS348_11700 IPR000390 Small multidrug resistance protein family CS348_11705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_11705 IPR006016 UspA CS348_11705 IPR006015 Universal stress protein A family CS348_11715 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CS348_11715 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CS348_11715 IPR011895 Pyruvate-flavodoxin oxidoreductase CS348_11715 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CS348_11715 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CS348_11715 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily CS348_11715 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CS348_11715 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_11715 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_11715 IPR029061 Thiamin diphosphate-binding fold CS348_11715 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain CS348_11715 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CS348_11725 IPR005590 Protein of unknown function DUF333 CS348_11730 IPR038670 HslJ-like superfamily CS348_11730 IPR005184 Domain of unknown function DUF306, Meta/HslJ CS348_11735 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CS348_11735 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS348_11735 IPR036291 NAD(P)-binding domain superfamily CS348_11735 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CS348_11735 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CS348_11740 IPR021730 Dicarboxylate transport CS348_11745 IPR025985 YnbE-like lipoprotein CS348_11750 IPR008309 Uncharacterised conserved protein UCP025560 CS348_11760 IPR023048 NADH-azoreductase, FMN-dependent CS348_11760 IPR029039 Flavoprotein-like superfamily CS348_11760 IPR003680 Flavodoxin-like fold CS348_11765 IPR010222 RNA helicase HrpA CS348_11765 IPR011709 Domain of unknown function DUF1605 CS348_11765 IPR007502 Helicase-associated domain CS348_11765 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_11765 IPR001650 Helicase, C-terminal CS348_11765 IPR024590 RNA helicase HrpA, C-terminal CS348_11765 IPR003593 AAA+ ATPase domain CS348_11765 IPR011545 DEAD/DEAH box helicase domain CS348_11765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_11770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_11770 IPR003848 Domain of unknown function DUF218 CS348_11775 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CS348_11775 IPR016174 Di-haem cytochrome, transmembrane CS348_11780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_11780 IPR016584 Methyltransferase VrtF-like CS348_11780 IPR013217 Methyltransferase type 12 CS348_11790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_11790 IPR035906 MetI-like superfamily CS348_11790 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CS348_11800 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CS348_11800 IPR035906 MetI-like superfamily CS348_11800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_11805 IPR018313 Solute-binding protein family 3, conserved site CS348_11805 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CS348_11805 IPR001320 Ionotropic glutamate receptor CS348_11815 IPR001087 GDSL lipase/esterase CS348_11815 IPR036514 SGNH hydrolase superfamily CS348_11815 IPR010637 Sif CS348_11830 IPR003735 Metal-sensitive transcriptional repressor CS348_11830 IPR038390 Metal-sensitive transcriptional repressor superfamily CS348_11835 IPR014183 Alcohol dehydrogenase class III CS348_11835 IPR011032 GroES-like superfamily CS348_11835 IPR013154 Alcohol dehydrogenase, N-terminal CS348_11835 IPR036291 NAD(P)-binding domain superfamily CS348_11835 IPR020843 Polyketide synthase, enoylreductase domain CS348_11835 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CS348_11835 IPR013149 Alcohol dehydrogenase, C-terminal CS348_11845 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CS348_11845 IPR003660 HAMP domain CS348_11845 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CS348_11845 IPR004090 Chemotaxis methyl-accepting receptor CS348_11845 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CS348_11845 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CS348_11850 IPR036390 Winged helix DNA-binding domain superfamily CS348_11850 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_11850 IPR000847 Transcription regulator HTH, LysR CS348_11850 IPR005119 LysR, substrate-binding CS348_11855 IPR009770 Domain of unknown function DUF1338 CS348_11860 IPR029058 Alpha/Beta hydrolase fold CS348_11860 IPR002018 Carboxylesterase, type B CS348_11860 IPR019826 Carboxylesterase type B, active site CS348_11860 IPR000997 Cholinesterase CS348_11860 IPR019819 Carboxylesterase type B, conserved site CS348_11865 IPR014756 Immunoglobulin E-set CS348_11865 IPR014438 Glucan biosynthesis protein MdoG/MdoD CS348_11865 IPR023724 Glucan biosynthesis, MdoD CS348_11865 IPR014718 Glycoside hydrolase-type carbohydrate-binding CS348_11865 IPR011013 Galactose mutarotase-like domain superfamily CS348_11865 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_11865 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal CS348_11865 IPR013783 Immunoglobulin-like fold CS348_11865 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_11870 IPR023480 Uncharacterised protein family UPF0312/YceI CS348_11870 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CS348_11870 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CS348_11875 IPR013785 Aldolase-type TIM barrel CS348_11875 IPR000262 FMN-dependent dehydrogenase CS348_11875 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CS348_11875 IPR014080 L-lactate oxidase CS348_11875 IPR037396 FMN hydroxy acid dehydrogenase domain CS348_11880 IPR000182 GNAT domain CS348_11880 IPR024170 Aminoglycoside N6-acetyltransferase CS348_11880 IPR016181 Acyl-CoA N-acyltransferase CS348_11885 IPR037171 NagB/RpiA transferase-like CS348_11885 IPR001034 DeoR-type HTH domain CS348_11885 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_11885 IPR014036 DeoR C-terminal sensor domain CS348_11890 IPR013785 Aldolase-type TIM barrel CS348_11890 IPR000056 Ribulose-phosphate 3-epimerase-like CS348_11890 IPR011060 Ribulose-phosphate binding barrel CS348_11895 IPR016152 Phosphotransferase/anion transporter CS348_11895 IPR002178 PTS EIIA type-2 domain CS348_11900 IPR005137 Membrane complex biogenesis protein, BtpA family CS348_11900 IPR011060 Ribulose-phosphate binding barrel CS348_11905 IPR004703 Phosphotransferase system, sugar-specific permease component CS348_11905 IPR013014 Phosphotransferase system, EIIC component, type 2 CS348_11905 IPR013853 Galactitol permease IIC component CS348_11910 IPR013011 Phosphotransferase system, EIIB component, type 2 CS348_11910 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CS348_11910 IPR036095 PTS system IIB component-like superfamily CS348_11915 IPR008007 Peptidase M42 CS348_11915 IPR023367 Peptidase M42, domain 2 CS348_11920 IPR000182 GNAT domain CS348_11920 IPR016181 Acyl-CoA N-acyltransferase CS348_11925 IPR040831 Beta solenoid repeat from YDCK CS348_11925 IPR011004 Trimeric LpxA-like superfamily CS348_11930 IPR038665 Voltage-dependent anion channel superfamily CS348_11930 IPR011552 Tellurite resistance protein TehA/malic acid transport protein CS348_11930 IPR039264 Tellurite resistance protein TehA CS348_11930 IPR004695 Voltage-dependent anion channel CS348_11935 IPR004537 Tellurite resistance methyltransferase, TehB CS348_11935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_11935 IPR015985 Tellurite resistance methyltransferase TehB-like domain CS348_11940 IPR021747 Protein of unknown function DUF3313 CS348_11945 IPR004711 Benzoate transporter CS348_11950 IPR011051 RmlC-like cupin domain superfamily CS348_11950 IPR013096 Cupin 2, conserved barrel CS348_11950 IPR001387 Cro/C1-type helix-turn-helix domain CS348_11950 IPR014710 RmlC-like jelly roll fold CS348_11950 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_11955 IPR001539 Peptidase U32 CS348_11955 IPR020988 Peptidase U32, collagenase CS348_11960 IPR020117 Uncharacterised protein family YncJ CS348_11965 IPR010637 Sif CS348_11980 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CS348_11980 IPR000755 D-alanyl-D-alanine dipeptidase CS348_11985 IPR015424 Pyridoxal phosphate-dependent transferase CS348_11985 IPR000524 Transcription regulator HTH, GntR CS348_11985 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_11985 IPR036390 Winged helix DNA-binding domain superfamily CS348_11985 IPR004839 Aminotransferase, class I/classII CS348_11985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_11985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_11990 IPR016161 Aldehyde/histidinol dehydrogenase CS348_11990 IPR015590 Aldehyde dehydrogenase domain CS348_11990 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_11990 IPR015657 Aminobutyraldehyde dehydrogenase CS348_11990 IPR017749 1-pyrroline dehydrogenase CS348_11990 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_11990 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CS348_12000 IPR019689 Toxin GhoT/OrtT CS348_12020 IPR019671 Protein of unknown function DUF2526 CS348_12025 IPR006750 Putative inner membrane exporter, YdcZ CS348_12030 IPR016181 Acyl-CoA N-acyltransferase CS348_12030 IPR000182 GNAT domain CS348_12035 IPR020843 Polyketide synthase, enoylreductase domain CS348_12035 IPR011032 GroES-like superfamily CS348_12035 IPR036291 NAD(P)-binding domain superfamily CS348_12035 IPR041694 Oxidoreductase, N-terminal domain CS348_12035 IPR013149 Alcohol dehydrogenase, C-terminal CS348_12040 IPR011711 GntR, C-terminal CS348_12040 IPR008920 Transcription regulator FadR/GntR, C-terminal CS348_12040 IPR000524 Transcription regulator HTH, GntR CS348_12040 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12040 IPR036390 Winged helix DNA-binding domain superfamily CS348_12045 IPR012910 TonB-dependent receptor, plug domain CS348_12045 IPR037066 TonB-dependent receptor, plug domain superfamily CS348_12045 IPR000531 TonB-dependent receptor-like, beta-barrel CS348_12045 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CS348_12045 IPR010105 TonB-dependent siderophore receptor CS348_12045 IPR039426 Vitamin B12 transporter BtuB-like CS348_12050 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CS348_12050 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CS348_12055 IPR010305 Protein of unknown function DUF903 CS348_12055 IPR010920 LSM domain superfamily CS348_12060 IPR004841 Amino acid permease/ SLC12A domain CS348_12060 IPR004840 Amino acid permease, conserved site CS348_12080 IPR038765 Papain-like cysteine peptidase superfamily CS348_12080 IPR001447 Arylamine N-acetyltransferase CS348_12085 IPR003719 Phenazine biosynthesis PhzF protein CS348_12090 IPR023234 NarG-like domain CS348_12090 IPR036197 NarG-like superfamily CS348_12090 IPR003816 Nitrate reductase, gamma subunit CS348_12095 IPR003765 Nitrate reductase chaperone, NarJ CS348_12095 IPR036411 TorD-like superfamily CS348_12095 IPR020945 DMSO/Nitrate reductase chaperone CS348_12100 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_12100 IPR029263 Respiratory nitrate reductase beta, C-terminal CS348_12100 IPR038262 Nitrate reductase beta, C-terminal domain superfamily CS348_12100 IPR006547 Nitrate reductase, beta subunit CS348_12105 IPR028189 Nitrate reductase, alpha subunit, N-terminal CS348_12105 IPR006657 Molybdopterin dinucleotide-binding domain CS348_12105 IPR006656 Molybdopterin oxidoreductase CS348_12105 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_12105 IPR037943 Nitrate reductase alpha subunit-like, MopB domain CS348_12105 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_12105 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_12105 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_12105 IPR006468 Nitrate reductase, alpha subunit CS348_12110 IPR004737 Nitrate transporter CS348_12110 IPR036259 MFS transporter superfamily CS348_12110 IPR011701 Major facilitator superfamily CS348_12120 IPR011701 Major facilitator superfamily CS348_12120 IPR020846 Major facilitator superfamily domain CS348_12120 IPR036259 MFS transporter superfamily CS348_12130 IPR001702 Porin, Gram-negative type CS348_12130 IPR033900 Porin domain, Gram-negative type CS348_12130 IPR023614 Porin domain superfamily CS348_12130 IPR001897 Porin, gammaproteobacterial CS348_12130 IPR013793 Porin, Gram-negative type, conserved site CS348_12140 IPR000620 EamA domain CS348_12145 IPR006443 Formate dehydrogenase-N, alpha subunit CS348_12145 IPR006657 Molybdopterin dinucleotide-binding domain CS348_12145 IPR006656 Molybdopterin oxidoreductase CS348_12145 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_12145 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_12145 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_12145 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_12145 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_12150 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_12150 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_12150 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_12150 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_12150 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_12150 IPR006656 Molybdopterin oxidoreductase CS348_12150 IPR006443 Formate dehydrogenase-N, alpha subunit CS348_12150 IPR006657 Molybdopterin dinucleotide-binding domain CS348_12155 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_12155 IPR015246 Formate dehydrogenase, transmembrane CS348_12155 IPR014603 Formate dehydrogenase iron-sulphur subunit CS348_12155 IPR038384 Formate dehydrogenase, C-terminal domain superfamily CS348_12155 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria CS348_12155 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_12160 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CS348_12160 IPR016174 Di-haem cytochrome, transmembrane CS348_12160 IPR006471 Formate dehydrogenase, gamma subunit CS348_12165 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CS348_12165 IPR013154 Alcohol dehydrogenase, N-terminal CS348_12165 IPR020843 Polyketide synthase, enoylreductase domain CS348_12165 IPR036291 NAD(P)-binding domain superfamily CS348_12165 IPR013149 Alcohol dehydrogenase, C-terminal CS348_12165 IPR011032 GroES-like superfamily CS348_12175 IPR012607 Ribosomal protein S22 CS348_12180 IPR019625 Biofilm-dependent modulation protein Bdm, putative CS348_12185 IPR019904 Peroxiredoxin OsmC CS348_12185 IPR015946 K homology domain-like, alpha/beta CS348_12185 IPR036102 OsmC/Ohr superfamily CS348_12185 IPR003718 OsmC/Ohr family CS348_12190 IPR027018 Hemolysin E CS348_12205 IPR010486 HNS-dependent expression A/B CS348_12205 IPR028623 HNS-dependent expression B CS348_12205 IPR038303 HNS-dependent expression A/B superfamily CS348_12215 IPR012768 Malto-oligosyltrehalose trehalohydrolase CS348_12215 IPR014756 Immunoglobulin E-set CS348_12215 IPR013783 Immunoglobulin-like fold CS348_12215 IPR017853 Glycoside hydrolase superfamily CS348_12215 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CS348_12215 IPR013780 Glycosyl hydrolase, all-beta CS348_12215 IPR004193 Glycoside hydrolase, family 13, N-terminal CS348_12215 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CS348_12220 IPR017853 Glycoside hydrolase superfamily CS348_12220 IPR012767 Maltooligosyl trehalose synthase CS348_12220 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CS348_12225 IPR013780 Glycosyl hydrolase, all-beta CS348_12225 IPR011837 Glycogen debranching enzyme, GlgX type CS348_12225 IPR014756 Immunoglobulin E-set CS348_12225 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CS348_12225 IPR004193 Glycoside hydrolase, family 13, N-terminal CS348_12225 IPR017853 Glycoside hydrolase superfamily CS348_12225 IPR013783 Immunoglobulin-like fold CS348_12230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_12230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_12230 IPR004839 Aminotransferase, class I/classII CS348_12230 IPR015424 Pyridoxal phosphate-dependent transferase CS348_12230 IPR027619 Putative C-S lyase CS348_12235 IPR004770 Na+/H+ antiporter NhaC CS348_12235 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CS348_12240 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_12240 IPR028082 Periplasmic binding protein-like I CS348_12240 IPR000843 LacI-type HTH domain CS348_12245 IPR013785 Aldolase-type TIM barrel CS348_12245 IPR004136 Nitronate monooxygenase CS348_12250 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12250 IPR000847 Transcription regulator HTH, LysR CS348_12250 IPR005119 LysR, substrate-binding CS348_12250 IPR036390 Winged helix DNA-binding domain superfamily CS348_12290 IPR035959 RutC-like superfamily CS348_12290 IPR038743 YjgH-like CS348_12290 IPR006175 YjgF/YER057c/UK114 family CS348_12295 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CS348_12295 IPR042118 QueA, domain 1 CS348_12295 IPR042119 QueA, domain 2 CS348_12295 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CS348_12305 IPR002938 FAD-binding domain CS348_12305 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_12310 IPR020846 Major facilitator superfamily domain CS348_12310 IPR036259 MFS transporter superfamily CS348_12310 IPR004734 Multidrug resistance protein CS348_12310 IPR005829 Sugar transporter, conserved site CS348_12310 IPR011701 Major facilitator superfamily CS348_12310 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CS348_12320 IPR000849 Sugar phosphate transporter CS348_12320 IPR036259 MFS transporter superfamily CS348_12320 IPR020846 Major facilitator superfamily domain CS348_12320 IPR011701 Major facilitator superfamily CS348_12325 IPR036291 NAD(P)-binding domain superfamily CS348_12325 IPR011032 GroES-like superfamily CS348_12325 IPR013149 Alcohol dehydrogenase, C-terminal CS348_12325 IPR013154 Alcohol dehydrogenase, N-terminal CS348_12330 IPR036390 Winged helix DNA-binding domain superfamily CS348_12330 IPR011711 GntR, C-terminal CS348_12330 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12330 IPR008920 Transcription regulator FadR/GntR, C-terminal CS348_12330 IPR000524 Transcription regulator HTH, GntR CS348_12340 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CS348_12340 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CS348_12340 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily CS348_12340 IPR001821 [NiFe]-hydrogenase, small subunit CS348_12340 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily CS348_12340 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_12340 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_12345 IPR001501 Nickel-dependent hydrogenase, large subunit CS348_12345 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site CS348_12345 IPR029014 [NiFe]-hydrogenase, large subunit CS348_12350 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CS348_12350 IPR016174 Di-haem cytochrome, transmembrane CS348_12350 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit CS348_12355 IPR023430 Peptidase HybD-like domain superfamily CS348_12355 IPR004419 Peptidase A31, hydrogenase expression/formation protein CS348_12355 IPR000671 Peptidase A31 family CS348_12360 IPR037254 HupF/HypC superfamily CS348_12360 IPR019812 Hydrogenase assembly chaperone, conserved site CS348_12360 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CS348_12370 IPR038527 HupH, C-terminal domain superfamily CS348_12370 IPR006894 HupH hydrogenase expression protein, C-terminal CS348_12380 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CS348_12380 IPR000688 Hydrogenase maturation factor HypA/HybF CS348_12385 IPR001897 Porin, gammaproteobacterial CS348_12385 IPR013793 Porin, Gram-negative type, conserved site CS348_12385 IPR001702 Porin, Gram-negative type CS348_12385 IPR023614 Porin domain superfamily CS348_12395 IPR021134 Bestrophin/UPF0187 CS348_12400 IPR020378 Protein of unknown function DUF4186 CS348_12405 IPR012338 Beta-lactamase/transpeptidase-like CS348_12405 IPR015868 Glutaminase CS348_12410 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_12410 IPR015590 Aldehyde dehydrogenase domain CS348_12410 IPR016160 Aldehyde dehydrogenase, cysteine active site CS348_12410 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_12410 IPR016161 Aldehyde/histidinol dehydrogenase CS348_12415 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12415 IPR000847 Transcription regulator HTH, LysR CS348_12415 IPR036390 Winged helix DNA-binding domain superfamily CS348_12415 IPR005119 LysR, substrate-binding CS348_12420 IPR011701 Major facilitator superfamily CS348_12420 IPR023495 Sugar efflux transporter, putative CS348_12420 IPR036259 MFS transporter superfamily CS348_12420 IPR020846 Major facilitator superfamily domain CS348_12425 IPR002771 Multiple antibiotic resistance (MarC)-related CS348_12430 IPR036390 Winged helix DNA-binding domain superfamily CS348_12430 IPR000835 MarR-type HTH domain CS348_12430 IPR023187 Transcriptional regulator MarR-type, conserved site CS348_12430 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12435 IPR018062 HTH domain AraC-type, conserved site CS348_12435 IPR009057 Homeobox-like domain superfamily CS348_12435 IPR018060 DNA binding HTH domain, AraC-type CS348_12440 IPR025732 MarB protein CS348_12445 IPR000620 EamA domain CS348_12450 IPR011701 Major facilitator superfamily CS348_12450 IPR036259 MFS transporter superfamily CS348_12450 IPR020846 Major facilitator superfamily domain CS348_12460 IPR005220 Bacterial OB-fold CS348_12460 IPR036700 Bacterial OB-fold superfamily CS348_12460 IPR016052 Bacteriophage 933W, L0136 CS348_12465 IPR036653 CinA-like, C-terminal CS348_12465 IPR008136 CinA, C-terminal CS348_12470 IPR019626 Stress-induced protein, KGG, repeat CS348_12480 IPR001567 Peptidase M3A/M3B catalytic domain CS348_12480 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CS348_12485 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_12485 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_12485 IPR036291 NAD(P)-binding domain superfamily CS348_12490 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12490 IPR011711 GntR, C-terminal CS348_12490 IPR008920 Transcription regulator FadR/GntR, C-terminal CS348_12490 IPR000524 Transcription regulator HTH, GntR CS348_12490 IPR036390 Winged helix DNA-binding domain superfamily CS348_12495 IPR017704 Putative selenium-binding protein YdfZ CS348_12500 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_12500 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_12500 IPR036291 NAD(P)-binding domain superfamily CS348_12500 IPR000669 Mannitol dehydrogenase CS348_12500 IPR013131 Mannitol dehydrogenase, N-terminal CS348_12500 IPR013118 Mannitol dehydrogenase, C-terminal CS348_12500 IPR023027 Mannitol dehydrogenase, conserved site CS348_12505 IPR036259 MFS transporter superfamily CS348_12505 IPR005828 Major facilitator, sugar transporter-like CS348_12505 IPR020846 Major facilitator superfamily domain CS348_12505 IPR011701 Major facilitator superfamily CS348_12505 IPR004736 MFS transporter, metabolite:H symporter CS348_12510 IPR013154 Alcohol dehydrogenase, N-terminal CS348_12510 IPR013149 Alcohol dehydrogenase, C-terminal CS348_12510 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CS348_12510 IPR011032 GroES-like superfamily CS348_12510 IPR036291 NAD(P)-binding domain superfamily CS348_12515 IPR034589 D-mannonate dehydratase-like CS348_12515 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CS348_12515 IPR034593 Mandelate racemase-like CS348_12515 IPR029065 Enolase C-terminal domain-like CS348_12515 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CS348_12515 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CS348_12515 IPR036849 Enolase-like, C-terminal domain superfamily CS348_12515 IPR029017 Enolase-like, N-terminal CS348_12520 IPR003844 Uncharacterised protein family UPF0060 CS348_12525 IPR009700 Protein of unknown function DUF1283 CS348_12530 IPR000182 GNAT domain CS348_12530 IPR016181 Acyl-CoA N-acyltransferase CS348_12535 IPR010646 Uncharacterised protein family UPF0257 CS348_12540 IPR010595 Protein of unknown function DUF1161 CS348_12550 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_12550 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_12550 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_12550 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_12550 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_12550 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CS348_12550 IPR006656 Molybdopterin oxidoreductase CS348_12550 IPR006657 Molybdopterin dinucleotide-binding domain CS348_12555 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_12555 IPR014297 Dimethylsulphoxide reductase, chain B CS348_12555 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_12560 IPR007059 DMSO reductase anchor subunit (DmsC) CS348_12565 IPR036411 TorD-like superfamily CS348_12565 IPR020945 DMSO/Nitrate reductase chaperone CS348_12565 IPR028611 Tat proofreading chaperone DmsD CS348_12565 IPR026269 Tat proofreading chaperone DmsD-type CS348_12570 IPR035906 MetI-like superfamily CS348_12570 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_12575 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CS348_12580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_12580 IPR035906 MetI-like superfamily CS348_12585 IPR003439 ABC transporter-like CS348_12585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_12585 IPR003593 AAA+ ATPase domain CS348_12585 IPR005892 Glycine betaine transport ATP-binding subunit CS348_12585 IPR000644 CBS domain CS348_12585 IPR017871 ABC transporter, conserved site CS348_12590 IPR001807 Chloride channel, voltage gated CS348_12590 IPR014743 Chloride channel, core CS348_12590 IPR023790 Chloride channel, voltage-gated, ClcB CS348_12595 IPR004472 Dethiobiotin synthase BioD CS348_12595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_12600 IPR036390 Winged helix DNA-binding domain superfamily CS348_12600 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12600 IPR000600 ROK family CS348_12610 IPR005119 LysR, substrate-binding CS348_12610 IPR000847 Transcription regulator HTH, LysR CS348_12610 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12610 IPR036390 Winged helix DNA-binding domain superfamily CS348_12615 IPR011701 Major facilitator superfamily CS348_12615 IPR005829 Sugar transporter, conserved site CS348_12615 IPR020846 Major facilitator superfamily domain CS348_12615 IPR036259 MFS transporter superfamily CS348_12630 IPR001254 Serine proteases, trypsin domain CS348_12630 IPR009003 Peptidase S1, PA clan CS348_12630 IPR008256 Peptidase S1B CS348_12630 IPR033116 Serine proteases, trypsin family, serine active site CS348_12630 IPR018114 Serine proteases, trypsin family, histidine active site CS348_12635 IPR000390 Small multidrug resistance protein family CS348_12635 IPR023737 Spermidine export protein MdtI CS348_12640 IPR023740 Spermidine export protein MdtJ CS348_12640 IPR000390 Small multidrug resistance protein family CS348_12650 IPR002549 Transmembrane protein TqsA-like CS348_12655 IPR034300 NADP transhydrogenase beta-like domain CS348_12655 IPR012136 NADP transhydrogenase, beta subunit CS348_12655 IPR029035 DHS-like NAD/FAD-binding domain superfamily CS348_12660 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CS348_12660 IPR026255 NAD(P) transhydrogenase, alpha subunit CS348_12660 IPR036291 NAD(P)-binding domain superfamily CS348_12660 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CS348_12660 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CS348_12660 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CS348_12660 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CS348_12665 IPR036275 YdgH-like superfamily CS348_12665 IPR025543 Dodecin-like CS348_12665 IPR010854 Domain of unknown function DUF1471 CS348_12665 IPR025539 YdgH protein CS348_12670 IPR004754 Amino acid antiporter CS348_12670 IPR002293 Amino acid/polyamine transporter I CS348_12675 IPR009707 Membrane protein GlpM/YdgC CS348_12680 IPR016032 Signal transduction response regulator, C-terminal effector CS348_12680 IPR039420 Transcriptional regulatory protein WalR-like CS348_12680 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12680 IPR001789 Signal transduction response regulator, receiver domain CS348_12680 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_12680 IPR011006 CheY-like superfamily CS348_12690 IPR033900 Porin domain, Gram-negative type CS348_12690 IPR023614 Porin domain superfamily CS348_12690 IPR001702 Porin, Gram-negative type CS348_12690 IPR001897 Porin, gammaproteobacterial CS348_12695 IPR011059 Metal-dependent hydrolase, composite domain superfamily CS348_12695 IPR026912 Adenine deaminase C-terminal domain CS348_12695 IPR006679 Adenine deaminase CS348_12695 IPR032466 Metal-dependent hydrolase CS348_12695 IPR006680 Amidohydrolase-related CS348_12700 IPR005467 Histidine kinase domain CS348_12700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_12700 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_12700 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_12700 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_12700 IPR003594 Histidine kinase/HSP90-like ATPase CS348_12700 IPR003660 HAMP domain CS348_12705 IPR036384 Replication terminator Tus superfamily CS348_12705 IPR036381 Replication terminator Tus, domain 1 CS348_12705 IPR008865 DNA replication terminus site-binding protein CS348_12710 IPR008948 L-Aspartase-like CS348_12710 IPR022761 Fumarate lyase, N-terminal CS348_12710 IPR000362 Fumarate lyase family CS348_12710 IPR005677 Fumarate hydratase, class II CS348_12710 IPR024083 Fumarase/histidase, N-terminal CS348_12710 IPR020557 Fumarate lyase, conserved site CS348_12710 IPR018951 Fumarase C, C-terminal CS348_12715 IPR020557 Fumarate lyase, conserved site CS348_12715 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily CS348_12715 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CS348_12715 IPR011167 Iron-dependent fumarate hydratase CS348_12715 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CS348_12720 IPR016305 Mannose-6-phosphate isomerase CS348_12720 IPR018050 Phosphomannose isomerase, type I, conserved site CS348_12720 IPR001250 Mannose-6-phosphate isomerase, type I CS348_12720 IPR011051 RmlC-like cupin domain superfamily CS348_12720 IPR014710 RmlC-like jelly roll fold CS348_12725 IPR010352 Protein of unknown function DUF945 CS348_12730 IPR028082 Periplasmic binding protein-like I CS348_12730 IPR000843 LacI-type HTH domain CS348_12730 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_12730 IPR001761 Periplasmic binding protein/LacI sugar binding domain CS348_12735 IPR003352 Phosphotransferase system, EIIC CS348_12735 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CS348_12735 IPR011301 PTS system, maltose/glucose-specific IIBC component CS348_12735 IPR036878 Glucose permease domain IIB CS348_12735 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CS348_12735 IPR001996 Phosphotransferase system, IIB component, type 1 CS348_12735 IPR013013 Phosphotransferase system, EIIC component, type 1 CS348_12740 IPR004839 Aminotransferase, class I/classII CS348_12740 IPR015424 Pyridoxal phosphate-dependent transferase CS348_12740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_12740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_12740 IPR027619 Putative C-S lyase CS348_12745 IPR006650 Adenosine/AMP deaminase active site CS348_12745 IPR006330 Adenosine/adenine deaminase CS348_12745 IPR001365 Adenosine/AMP deaminase domain CS348_12745 IPR032466 Metal-dependent hydrolase CS348_12745 IPR028893 Adenosine deaminase CS348_12750 IPR004104 Oxidoreductase, C-terminal CS348_12750 IPR000683 Oxidoreductase, N-terminal CS348_12750 IPR036291 NAD(P)-binding domain superfamily CS348_12760 IPR007985 Haemolysin expression modulating, HHA CS348_12760 IPR036666 HHA superfamily CS348_12765 IPR019690 Protein of unknown function DUF2569 CS348_12770 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA CS348_12770 IPR003667 NqrDE/RnfAE CS348_12775 IPR011005 Dihydropteroate synthase-like CS348_12775 IPR007202 4Fe-4S domain CS348_12775 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_12775 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB CS348_12775 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria CS348_12775 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_12780 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC CS348_12780 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CS348_12780 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CS348_12780 IPR026902 RnfC Barrel sandwich hybrid domain CS348_12780 IPR019554 Soluble ligand binding domain CS348_12780 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_12780 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_12780 IPR009051 Alpha-helical ferredoxin CS348_12785 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD CS348_12785 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D CS348_12790 IPR007329 FMN-binding CS348_12790 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG CS348_12795 IPR003667 NqrDE/RnfAE CS348_12795 IPR010968 Ion-translocating oxidoreductase complex subunit E CS348_12800 IPR004036 Endonuclease III-like, conserved site-2 CS348_12800 IPR011257 DNA glycosylase CS348_12800 IPR004035 Endonuclease III, iron-sulphur binding site CS348_12800 IPR003265 HhH-GPD domain CS348_12800 IPR000445 Helix-hairpin-helix motif CS348_12800 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CS348_12800 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CS348_12800 IPR005759 Endonuclease III CS348_12805 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CS348_12805 IPR000109 Proton-dependent oligopeptide transporter family CS348_12805 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A CS348_12805 IPR036259 MFS transporter superfamily CS348_12805 IPR020846 Major facilitator superfamily domain CS348_12805 IPR005279 Dipeptide/tripeptide permease CS348_12810 IPR040079 Glutathione Transferase family CS348_12810 IPR004045 Glutathione S-transferase, N-terminal CS348_12810 IPR036249 Thioredoxin-like superfamily CS348_12810 IPR010987 Glutathione S-transferase, C-terminal-like CS348_12810 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CS348_12810 IPR004046 Glutathione S-transferase, C-terminal CS348_12815 IPR004625 Pyridoxine kinase CS348_12815 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CS348_12815 IPR029056 Ribokinase-like CS348_12815 IPR023685 Pyridoxal kinase PdxY CS348_12820 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 CS348_12820 IPR024088 Tyrosine-tRNA ligase, bacterial-type CS348_12820 IPR002305 Aminoacyl-tRNA synthetase, class Ic CS348_12820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_12820 IPR002307 Tyrosine-tRNA ligase CS348_12820 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CS348_12820 IPR036986 RNA-binding S4 domain superfamily CS348_12820 IPR002942 RNA-binding S4 domain CS348_12825 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CS348_12825 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CS348_12825 IPR000659 Pyridoxamine 5'-phosphate oxidase CS348_12825 IPR012349 FMN-binding split barrel CS348_12825 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CS348_12830 IPR036328 C-type lysozyme inhibitor superfamily CS348_12830 IPR018660 C-type lysozyme inhibitor CS348_12835 IPR005338 Anhydro-N-acetylmuramic acid kinase CS348_12840 IPR008816 Glycine zipper 2TM domain CS348_12845 IPR023187 Transcriptional regulator MarR-type, conserved site CS348_12845 IPR000835 MarR-type HTH domain CS348_12845 IPR036390 Winged helix DNA-binding domain superfamily CS348_12845 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12845 IPR023071 Transcriptional regulator, SlyA CS348_12850 IPR012451 Protein of unknown function DUF1656 CS348_12855 IPR006143 RND efflux pump, membrane fusion protein CS348_12855 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CS348_12860 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein CS348_12865 IPR018152 Superoxide dismutase, copper/zinc, binding site CS348_12865 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CS348_12865 IPR001424 Superoxide dismutase, copper/zinc binding domain CS348_12865 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CS348_12870 IPR023210 NADP-dependent oxidoreductase domain CS348_12870 IPR036812 NADP-dependent oxidoreductase domain superfamily CS348_12870 IPR020471 Aldo/keto reductase CS348_12875 IPR010710 Protein of unknown function DUF1289 CS348_12880 IPR011075 Tetracyclin repressor-like, C-terminal domain CS348_12880 IPR009057 Homeobox-like domain superfamily CS348_12880 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_12880 IPR001647 DNA-binding HTH domain, TetR-type CS348_12885 IPR013785 Aldolase-type TIM barrel CS348_12885 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CS348_12890 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CS348_12890 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CS348_12890 IPR004361 Glyoxalase I CS348_12890 IPR018146 Glyoxalase I, conserved site CS348_12890 IPR037523 Vicinal oxygen chelate (VOC) domain CS348_12895 IPR036397 Ribonuclease H superfamily CS348_12895 IPR012337 Ribonuclease H-like superfamily CS348_12895 IPR013520 Exonuclease, RNase T/DNA polymerase III CS348_12895 IPR005987 Ribonuclease T CS348_12900 IPR014434 Monothiol glutaredoxin CS348_12900 IPR004480 Monothiol glutaredoxin-related CS348_12900 IPR033658 Glutaredoxin, PICOT-like CS348_12900 IPR002109 Glutaredoxin CS348_12900 IPR036249 Thioredoxin-like superfamily CS348_12905 IPR000064 Endopeptidase, NLPC/P60 domain CS348_12905 IPR038765 Papain-like cysteine peptidase superfamily CS348_12910 IPR019831 Manganese/iron superoxide dismutase, N-terminal CS348_12910 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CS348_12910 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CS348_12910 IPR019833 Manganese/iron superoxide dismutase, binding site CS348_12910 IPR001189 Manganese/iron superoxide dismutase CS348_12910 IPR019832 Manganese/iron superoxide dismutase, C-terminal CS348_12925 IPR000843 LacI-type HTH domain CS348_12925 IPR023588 Transcription regulator HTH, PurR CS348_12925 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_12925 IPR028082 Periplasmic binding protein-like I CS348_12930 IPR036390 Winged helix DNA-binding domain superfamily CS348_12930 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_12930 IPR005119 LysR, substrate-binding CS348_12930 IPR000847 Transcription regulator HTH, LysR CS348_12935 IPR011701 Major facilitator superfamily CS348_12935 IPR020846 Major facilitator superfamily domain CS348_12935 IPR036259 MFS transporter superfamily CS348_12935 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CS348_12940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_12940 IPR003333 Mycolic acid cyclopropane synthase CS348_12945 IPR017938 Riboflavin synthase-like beta-barrel CS348_12945 IPR026017 Lumazine-binding domain CS348_12945 IPR001783 Lumazine-binding protein CS348_12945 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CS348_12950 IPR022913 Multidrug resistance protein MdtK CS348_12950 IPR002528 Multi antimicrobial extrusion protein CS348_12965 IPR006307 Type III exporter system, secretion apparatus protein BsaZ CS348_12965 IPR006135 Type III secretion system substrate exporter CS348_12965 IPR029025 Type III secretion system substrate exporter, C-terminal CS348_12970 IPR002010 Type III secretion system inner membrane R protein CS348_12970 IPR006304 Type III secretion protein SpaR/YscT CS348_12975 IPR002191 Bacterial export protein family 3 CS348_12975 IPR006306 Type III secretion protein HrpO CS348_12980 IPR005773 Yop virulence translocation protein R CS348_12980 IPR005838 Type III secretion system inner membrane P protein CS348_12985 IPR001543 Surface presentation of antigen (SpoA) CS348_12985 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CS348_12985 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO CS348_12985 IPR036429 SpoA-like superfamily CS348_13000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_13000 IPR013380 ATPase, type III secretion system, H+-transporting CS348_13000 IPR005714 ATPase, type III secretion system, FliI/YscN CS348_13000 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CS348_13000 IPR003593 AAA+ ATPase domain CS348_13000 IPR040627 T3SS EscN ATPase, C-terminal CS348_13005 IPR042193 FHIPEP, domain 3 CS348_13005 IPR042196 FHIPEP, domain 4 CS348_13005 IPR025505 FHIPEP conserved site CS348_13005 IPR001712 Type III secretion system FHIPEP CS348_13005 IPR006302 Type III secretion protein HrcV CS348_13010 IPR017033 Type III secretion system apparatus protein SsaM CS348_13015 IPR013351 Type III secretion system effector delivery regulator TyeA-related CS348_13015 IPR010812 Hypersensitivity response secretion-like, HrpJ CS348_13020 IPR012842 Type III secretion system HrpE/YscL CS348_13030 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ CS348_13030 IPR006182 Secretory protein YscJ/FliF CS348_13070 IPR008611 Protein EaeB CS348_13075 IPR006972 Secretion system effector C, SseC-like CS348_13085 IPR005095 EspA-like secreted protein CS348_13085 IPR035074 EspA/CesA-like CS348_13120 IPR001789 Signal transduction response regulator, receiver domain CS348_13120 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CS348_13120 IPR003594 Histidine kinase/HSP90-like ATPase CS348_13120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_13120 IPR036641 HPT domain superfamily CS348_13120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_13120 IPR011006 CheY-like superfamily CS348_13120 IPR003660 HAMP domain CS348_13120 IPR019247 Histidine kinase BarA, N-terminal CS348_13120 IPR005467 Histidine kinase domain CS348_13120 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_13120 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_13125 IPR000792 Transcription regulator LuxR, C-terminal CS348_13125 IPR011006 CheY-like superfamily CS348_13125 IPR016032 Signal transduction response regulator, C-terminal effector CS348_13125 IPR001789 Signal transduction response regulator, receiver domain CS348_13130 IPR009061 Putative DNA-binding domain superfamily CS348_13130 IPR000551 MerR-type HTH domain CS348_13135 IPR013560 Domain of unknown function DUF1722 CS348_13140 IPR024493 Fumarase D CS348_13145 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_13145 IPR000792 Transcription regulator LuxR, C-terminal CS348_13145 IPR001789 Signal transduction response regulator, receiver domain CS348_13145 IPR011006 CheY-like superfamily CS348_13150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_13150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_13150 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_13150 IPR005467 Histidine kinase domain CS348_13150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_13150 IPR003594 Histidine kinase/HSP90-like ATPase CS348_13155 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_13155 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_13155 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_13160 IPR005614 NrfD family CS348_13165 IPR037946 Tetrathionate reductase subunit A, MopB domain CS348_13165 IPR006656 Molybdopterin oxidoreductase CS348_13165 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_13165 IPR041929 Tetrathionate reductase subunit A, N-terminal CS348_13165 IPR006657 Molybdopterin dinucleotide-binding domain CS348_13165 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_13170 IPR029056 Ribokinase-like CS348_13170 IPR002139 Ribokinase/fructokinase CS348_13170 IPR011611 Carbohydrate kinase PfkB CS348_13170 IPR011877 Ribokinase CS348_13170 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_13180 IPR029058 Alpha/Beta hydrolase fold CS348_13180 IPR005945 Proline-specific peptidase CS348_13180 IPR002410 Peptidase S33 CS348_13180 IPR000073 Alpha/beta hydrolase fold-1 CS348_13185 IPR004841 Amino acid permease/ SLC12A domain CS348_13190 IPR001697 Pyruvate kinase CS348_13190 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_13190 IPR040442 Pyruvate kinase-like domain superfamily CS348_13190 IPR015795 Pyruvate kinase, C-terminal CS348_13190 IPR018209 Pyruvate kinase, active site CS348_13190 IPR015793 Pyruvate kinase, barrel CS348_13190 IPR036918 Pyruvate kinase, C-terminal domain superfamily CS348_13190 IPR011037 Pyruvate kinase-like, insert domain superfamily CS348_13190 IPR015806 Pyruvate kinase, insert domain superfamily CS348_13195 IPR006817 Lipoprotein leucine-zipper CS348_13195 IPR016367 Murein-lipoprotein CS348_13200 IPR006817 Lipoprotein leucine-zipper CS348_13200 IPR016367 Murein-lipoprotein CS348_13205 IPR005490 L,D-transpeptidase catalytic domain CS348_13205 IPR041597 L,D-transpeptidase C-terminal domain CS348_13205 IPR018392 LysM domain CS348_13205 IPR038063 L,D-transpeptidase catalytic domain-like CS348_13210 IPR003808 Fe-S metabolism associated domain, SufE-like CS348_13210 IPR023939 Cysteine desulfuration protein SufE CS348_13215 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_13215 IPR015424 Pyridoxal phosphate-dependent transferase CS348_13215 IPR010970 Cysteine desulfurase, SufS CS348_13215 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CS348_13215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_13215 IPR000192 Aminotransferase class V domain CS348_13220 IPR011542 SUF system FeS cluster assembly, SufD CS348_13220 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CS348_13220 IPR000825 SUF system FeS cluster assembly, SufBD CS348_13225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_13225 IPR010230 FeS cluster assembly SUF system, ATPase SufC CS348_13225 IPR017871 ABC transporter, conserved site CS348_13225 IPR003439 ABC transporter-like CS348_13225 IPR003593 AAA+ ATPase domain CS348_13230 IPR000825 SUF system FeS cluster assembly, SufBD CS348_13230 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CS348_13230 IPR010231 SUF system FeS cluster assembly, SufB CS348_13235 IPR016092 FeS cluster insertion protein CS348_13235 IPR000361 FeS cluster biogenesis CS348_13235 IPR035903 HesB-like domain superfamily CS348_13235 IPR011298 FeS assembly scaffold SufA CS348_13235 IPR017870 FeS cluster insertion, C-terminal, conserved site CS348_13245 IPR031830 Uncharacterised protein YdiH CS348_13250 IPR029069 HotDog domain superfamily CS348_13250 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI CS348_13250 IPR003736 Phenylacetic acid degradation-related domain CS348_13250 IPR006683 Thioesterase domain CS348_13255 IPR009051 Alpha-helical ferredoxin CS348_13255 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_13255 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_13255 IPR016166 FAD-binding domain, PCMH-type CS348_13255 IPR016164 FAD-linked oxidase-like, C-terminal CS348_13255 IPR004113 FAD-linked oxidase, C-terminal CS348_13255 IPR006094 FAD linked oxidase, N-terminal CS348_13255 IPR036318 FAD-binding, type PCMH-like superfamily CS348_13260 IPR002549 Transmembrane protein TqsA-like CS348_13270 IPR027910 YdiL domain superfamily CS348_13270 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_13270 IPR015060 Protein of unknown function DUF1870 CS348_13275 IPR005829 Sugar transporter, conserved site CS348_13275 IPR036259 MFS transporter superfamily CS348_13275 IPR020846 Major facilitator superfamily domain CS348_13275 IPR011701 Major facilitator superfamily CS348_13280 IPR011701 Major facilitator superfamily CS348_13280 IPR020846 Major facilitator superfamily domain CS348_13280 IPR036259 MFS transporter superfamily CS348_13285 IPR022872 Quinate/Shikimate dehydrogenase CS348_13285 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CS348_13285 IPR022893 Shikimate dehydrogenase family CS348_13285 IPR041121 SDH, C-terminal CS348_13285 IPR036291 NAD(P)-binding domain superfamily CS348_13290 IPR018508 3-dehydroquinate dehydratase, active site CS348_13290 IPR001381 3-dehydroquinate dehydratase type I CS348_13290 IPR013785 Aldolase-type TIM barrel CS348_13295 IPR004165 Coenzyme A transferase family I CS348_13295 IPR014388 3-oxoacid CoA-transferase CS348_13295 IPR037171 NagB/RpiA transferase-like CS348_13300 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CS348_13300 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CS348_13300 IPR006089 Acyl-CoA dehydrogenase, conserved site CS348_13300 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CS348_13300 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CS348_13300 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CS348_13300 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CS348_13305 IPR018060 DNA binding HTH domain, AraC-type CS348_13305 IPR011051 RmlC-like cupin domain superfamily CS348_13305 IPR003313 AraC-type arabinose-binding/dimerisation domain CS348_13305 IPR009057 Homeobox-like domain superfamily CS348_13305 IPR014710 RmlC-like jelly roll fold CS348_13310 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CS348_13310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_13310 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CS348_13310 IPR012255 Electron transfer flavoprotein, beta subunit CS348_13310 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CS348_13315 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CS348_13315 IPR029035 DHS-like NAD/FAD-binding domain superfamily CS348_13315 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CS348_13315 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CS348_13315 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CS348_13315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_13320 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_13320 IPR039651 Protein FixC-like CS348_13320 IPR002938 FAD-binding domain CS348_13325 IPR012206 Ferredoxin-like, FixX CS348_13325 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_13330 IPR025110 AMP-binding enzyme, C-terminal domain CS348_13330 IPR020845 AMP-binding, conserved site CS348_13330 IPR042099 AMP-dependent synthetase-like superfamily CS348_13330 IPR000873 AMP-dependent synthetase/ligase CS348_13335 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CS348_13335 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_13335 IPR036637 Phosphohistidine domain superfamily CS348_13335 IPR023151 PEP-utilising enzyme, conserved site CS348_13335 IPR000121 PEP-utilising enzyme, C-terminal CS348_13335 IPR018274 PEP-utilising enzyme, active site CS348_13335 IPR006319 Phosphoenolpyruvate synthase CS348_13335 IPR008279 PEP-utilising enzyme, mobile domain CS348_13335 IPR013815 ATP-grasp fold, subdomain 1 CS348_13335 IPR040442 Pyruvate kinase-like domain superfamily CS348_13340 IPR005177 Bifunctional kinase-pyrophosphorylase CS348_13340 IPR026530 Phosphoenolpyruvate synthase regulatory protein CS348_13345 IPR006219 DHAP synthase, class 1 CS348_13345 IPR013785 Aldolase-type TIM barrel CS348_13345 IPR006218 DAHP synthetase I/KDSA CS348_13350 IPR019600 Hemin uptake protein HemP CS348_13355 IPR003846 Protein adenylyltransferase SelO CS348_13360 IPR035919 EAL domain superfamily CS348_13360 IPR001633 EAL domain CS348_13365 IPR000064 Endopeptidase, NLPC/P60 domain CS348_13365 IPR038765 Papain-like cysteine peptidase superfamily CS348_13370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_13370 IPR023693 ABC transporter, vitamin B12, BtuD CS348_13370 IPR017871 ABC transporter, conserved site CS348_13370 IPR003439 ABC transporter-like CS348_13370 IPR003593 AAA+ ATPase domain CS348_13375 IPR036249 Thioredoxin-like superfamily CS348_13375 IPR029760 Glutathione peroxidase conserved site CS348_13375 IPR029759 Glutathione peroxidase active site CS348_13375 IPR000889 Glutathione peroxidase CS348_13375 IPR033674 Thioredoxin/glutathione peroxidase BtuE CS348_13380 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC CS348_13380 IPR037294 ABC transporter, BtuC-like CS348_13380 IPR000522 ABC transporter, permease protein, BtuC-like CS348_13390 IPR011931 Tyrosine recombinase XerC CS348_13390 IPR004107 Integrase, SAM-like, N-terminal CS348_13390 IPR010998 Integrase/recombinase, N-terminal CS348_13390 IPR002104 Integrase, catalytic domain CS348_13390 IPR013762 Integrase-like, catalytic domain superfamily CS348_13390 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_13390 IPR023009 Tyrosine recombinase XerC/XerD CS348_13440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_13440 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CS348_13440 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_13440 IPR023095 Adenine-specific methyltransferase, domain 2 CS348_13440 IPR012263 Adenine modification methylase, M.EcoRV-type CS348_13455 IPR008766 Replication gene A protein CS348_13485 IPR030935 Phage portal protein PBSX family, Proteobacteria CS348_13485 IPR006430 Phage portal protein PBSX family CS348_13530 IPR004929 Spanin, inner membrane subunit CS348_13565 IPR011083 Phage tail collar domain CS348_13565 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal CS348_13565 IPR008969 Carboxypeptidase-like, regulatory domain superfamily CS348_13565 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 CS348_13565 IPR037053 Phage tail collar domain superfamily CS348_13605 IPR020287 Tail sheath protein, C-terminal domain CS348_13605 IPR035089 Tail sheath protein, subtilisin-like domain CS348_13620 IPR000021 Hok/gef cell toxic protein CS348_13620 IPR018084 Hok/gef cell toxic protein, conserved site CS348_13625 IPR000119 Histone-like DNA-binding protein CS348_13625 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CS348_13625 IPR005684 Integration host factor, alpha subunit CS348_13625 IPR020816 Histone-like DNA-binding protein, conserved site CS348_13630 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CS348_13630 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CS348_13630 IPR005121 Ferrodoxin-fold anticodon-binding domain CS348_13630 IPR009061 Putative DNA-binding domain superfamily CS348_13630 IPR002547 tRNA-binding domain CS348_13630 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CS348_13630 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CS348_13630 IPR012340 Nucleic acid-binding, OB-fold CS348_13630 IPR005147 tRNA synthetase, B5-domain CS348_13630 IPR005146 B3/B4 tRNA-binding domain CS348_13630 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CS348_13635 IPR006195 Aminoacyl-tRNA synthetase, class II CS348_13635 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CS348_13635 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CS348_13635 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CS348_13635 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CS348_13635 IPR002319 Phenylalanyl-tRNA synthetase CS348_13640 IPR005813 Ribosomal protein L20 CS348_13640 IPR035566 Ribosomal protein L20, C-terminal CS348_13645 IPR037229 Ribosomal protein L35 superfamily CS348_13645 IPR001706 Ribosomal protein L35, non-mitochondrial CS348_13645 IPR021137 Ribosomal protein L35 CS348_13645 IPR018265 Ribosomal protein L35, conserved site CS348_13650 IPR019814 Translation initiation factor 3, N-terminal CS348_13650 IPR001288 Translation initiation factor 3 CS348_13650 IPR019813 Translation initiation factor 3, conserved site CS348_13650 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CS348_13650 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CS348_13650 IPR019815 Translation initiation factor 3, C-terminal CS348_13655 IPR012675 Beta-grasp domain superfamily CS348_13655 IPR012676 TGS-like CS348_13655 IPR036621 Anticodon-binding domain superfamily CS348_13655 IPR006195 Aminoacyl-tRNA synthetase, class II CS348_13655 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CS348_13655 IPR004095 TGS CS348_13655 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CS348_13655 IPR004154 Anticodon-binding CS348_13655 IPR002320 Threonine-tRNA ligase, class IIa CS348_13655 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CS348_13655 IPR033728 Threonine-tRNA ligase catalytic core domain CS348_13665 IPR040255 Non-specific endonuclease CS348_13665 IPR020821 Extracellular Endonuclease, subunit A CS348_13665 IPR001604 DNA/RNA non-specific endonuclease CS348_13665 IPR018524 DNA/RNA non-specific endonuclease, active site CS348_13680 IPR007433 Protein of unknown function DUF481 CS348_13685 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_13685 IPR011611 Carbohydrate kinase PfkB CS348_13685 IPR017583 Tagatose/fructose phosphokinase CS348_13685 IPR029056 Ribokinase-like CS348_13690 IPR038241 Endoribonuclease antitoxin GhoS superfamily CS348_13690 IPR022597 Endoribonuclease antitoxin GhoS CS348_13700 IPR025229 YniB-like protein CS348_13705 IPR041492 Haloacid dehalogenase-like hydrolase CS348_13705 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CS348_13705 IPR036412 HAD-like superfamily CS348_13705 IPR006439 HAD hydrolase, subfamily IA CS348_13705 IPR023214 HAD superfamily CS348_13710 IPR016956 Inner membrane protein YdjM CS348_13710 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CS348_13720 IPR019666 Cell division activator CedA CS348_13720 IPR038463 CedA-like superfamily CS348_13725 IPR041399 Large catalase, C-terminal domain CS348_13725 IPR024708 Catalase active site CS348_13725 IPR024712 Catalase, mono-functional, haem-containing, clade 2 CS348_13725 IPR011614 Catalase core domain CS348_13725 IPR037060 Catalase core domain superfamily CS348_13725 IPR002226 Catalase haem-binding site CS348_13725 IPR018028 Catalase, mono-functional, haem-containing CS348_13725 IPR020835 Catalase superfamily CS348_13725 IPR029062 Class I glutamine amidotransferase-like CS348_13725 IPR010582 Catalase immune-responsive domain CS348_13730 IPR006879 Carbohydrate deacetylase YdjC-like CS348_13730 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CS348_13730 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria CS348_13735 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CS348_13735 IPR036291 NAD(P)-binding domain superfamily CS348_13735 IPR022616 Glycosyl hydrolase, family 4, C-terminal CS348_13735 IPR001088 Glycoside hydrolase, family 4 CS348_13735 IPR019802 Glycoside hydrolase, family 4, conserved site CS348_13740 IPR013096 Cupin 2, conserved barrel CS348_13740 IPR020449 Transcription regulator HTH, AraC- type CS348_13740 IPR014710 RmlC-like jelly roll fold CS348_13740 IPR018062 HTH domain AraC-type, conserved site CS348_13740 IPR018060 DNA binding HTH domain, AraC-type CS348_13740 IPR009057 Homeobox-like domain superfamily CS348_13740 IPR011051 RmlC-like cupin domain superfamily CS348_13745 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit CS348_13745 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily CS348_13750 IPR004796 Phosphotransferase system, cellobiose-type IIC component CS348_13750 IPR003352 Phosphotransferase system, EIIC CS348_13750 IPR004501 Phosphotransferase system, EIIC component, type 3 CS348_13755 IPR036095 PTS system IIB component-like superfamily CS348_13755 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CS348_13755 IPR013012 Phosphotransferase system, EIIB component, type 3 CS348_13765 IPR037873 BamE-like CS348_13765 IPR007450 Lipoprotein SmpA/OmlA CS348_13770 IPR022926 NH(3)-dependent NAD(+) synthetase CS348_13770 IPR003694 NAD(+) synthetase CS348_13770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_13770 IPR022310 NAD/GMP synthase CS348_13775 IPR000305 GIY-YIG endonuclease CS348_13775 IPR035901 GIY-YIG endonuclease superfamily CS348_13780 IPR012899 LTXXQ motif family protein CS348_13790 IPR016681 Succinylglutamate desuccinylase CS348_13790 IPR007036 Succinylglutamate desuccinylase/aspartoacylase CS348_13795 IPR037031 Succinylarginine dihydrolase superfamily CS348_13795 IPR007079 Succinylarginine dihydrolase CS348_13800 IPR016161 Aldehyde/histidinol dehydrogenase CS348_13800 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_13800 IPR016160 Aldehyde dehydrogenase, cysteine active site CS348_13800 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CS348_13800 IPR015590 Aldehyde dehydrogenase domain CS348_13800 IPR017649 Succinylglutamate-semialdehyde dehydrogenase CS348_13800 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_13805 IPR007041 Arginine N-succinyltransferase AstA/AruG CS348_13805 IPR017650 Arginine N-succinyltransferase CS348_13805 IPR016181 Acyl-CoA N-acyltransferase CS348_13810 IPR004636 Acetylornithine/Succinylornithine transaminase family CS348_13810 IPR026330 Succinylornithine transaminase CS348_13810 IPR005814 Aminotransferase class-III CS348_13810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_13810 IPR015424 Pyridoxal phosphate-dependent transferase CS348_13810 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_13810 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria CS348_13820 IPR004808 AP endonuclease 1 CS348_13820 IPR020847 AP endonuclease 1, binding site CS348_13820 IPR020848 AP endonuclease 1, conserved site CS348_13820 IPR005135 Endonuclease/exonuclease/phosphatase CS348_13820 IPR037493 Exodeoxyribonuclease III-like CS348_13820 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CS348_13825 IPR015797 NUDIX hydrolase-like domain superfamily CS348_13825 IPR020476 NUDIX hydrolase CS348_13825 IPR020084 NUDIX hydrolase, conserved site CS348_13825 IPR000086 NUDIX hydrolase domain CS348_13830 IPR009971 Protein of unknown function DUF1496 CS348_13835 IPR014362 Glutamate dehydrogenase CS348_13835 IPR036291 NAD(P)-binding domain superfamily CS348_13835 IPR033524 Leu/Phe/Val dehydrogenases active site CS348_13835 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CS348_13835 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CS348_13835 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CS348_13835 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CS348_13840 IPR013497 DNA topoisomerase, type IA, central CS348_13840 IPR005738 DNA topoisomerase III CS348_13840 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CS348_13840 IPR023405 DNA topoisomerase, type IA, core domain CS348_13840 IPR023406 DNA topoisomerase, type IA, active site CS348_13840 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CS348_13840 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CS348_13840 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CS348_13840 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CS348_13840 IPR006171 TOPRIM domain CS348_13840 IPR000380 DNA topoisomerase, type IA CS348_13840 IPR003601 DNA topoisomerase, type IA, domain 2 CS348_13845 IPR016188 PurM-like, N-terminal domain CS348_13845 IPR023061 Selenophosphate synthetase, class I CS348_13845 IPR010918 PurM-like, C-terminal domain CS348_13845 IPR004536 Selenophosphate synthetase CS348_13845 IPR036676 PurM-like, C-terminal domain superfamily CS348_13845 IPR036921 PurM-like, N-terminal domain superfamily CS348_13855 IPR029479 Nitroreductase CS348_13855 IPR000415 Nitroreductase-like CS348_13855 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CS348_13865 IPR033854 Signal peptide peptidase A CS348_13865 IPR004634 Peptidase S49, protease IV CS348_13865 IPR029045 ClpP/crotonase-like domain superfamily CS348_13865 IPR002142 Peptidase S49 CS348_13865 IPR004635 Peptidase S49, SppA CS348_13870 IPR037152 L-asparaginase, N-terminal domain superfamily CS348_13870 IPR027474 L-asparaginase, N-terminal CS348_13870 IPR041725 Type I (cytosolic) L-asparaginase CS348_13870 IPR027473 L-asparaginase, C-terminal CS348_13870 IPR040919 Asparaginase/glutaminase, C-terminal CS348_13870 IPR020827 Asparaginase/glutaminase, active site 1 CS348_13870 IPR027475 Asparaginase/glutaminase, active site 2 CS348_13870 IPR006034 Asparaginase/glutaminase-like CS348_13870 IPR036152 Asparaginase/glutaminase-like superfamily CS348_13870 IPR006033 Type I L-asparaginase family CS348_13875 IPR036380 Isochorismatase-like superfamily CS348_13875 IPR000868 Isochorismatase-like CS348_13880 IPR009749 Protein of unknown function DUF1315 CS348_13885 IPR011057 Mss4-like superfamily CS348_13885 IPR028427 Peptide methionine sulfoxide reductase CS348_13885 IPR002579 Peptide methionine sulphoxide reductase MrsB CS348_13890 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CS348_13890 IPR036291 NAD(P)-binding domain superfamily CS348_13890 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CS348_13890 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CS348_13890 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CS348_13890 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CS348_13900 IPR014718 Glycoside hydrolase-type carbohydrate-binding CS348_13900 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CS348_13900 IPR025532 Glucose-6-phosphate 1-epimerase CS348_13900 IPR011013 Galactose mutarotase-like domain superfamily CS348_13905 IPR020471 Aldo/keto reductase CS348_13905 IPR023210 NADP-dependent oxidoreductase domain CS348_13905 IPR036812 NADP-dependent oxidoreductase domain superfamily CS348_13910 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme CS348_13910 IPR013785 Aldolase-type TIM barrel CS348_13910 IPR023885 4Fe4S-binding SPASM domain CS348_13910 IPR007197 Radical SAM CS348_13915 IPR010583 MltA-interacting MipA CS348_13920 IPR013153 PrkA AAA domain CS348_13920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_13920 IPR010650 PrkA C-terminal domain CS348_13920 IPR016230 Serine-protein kinase, PrkA CS348_13925 IPR006698 Uncharacterised protein family UPF0229 CS348_13930 IPR029787 Nucleotide cyclase CS348_13930 IPR000160 GGDEF domain CS348_13930 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 CS348_13935 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CS348_13935 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CS348_13945 IPR007382 Uncharacterised protein family UPF0756, transmembrame CS348_13950 IPR009057 Homeobox-like domain superfamily CS348_13950 IPR003313 AraC-type arabinose-binding/dimerisation domain CS348_13950 IPR011051 RmlC-like cupin domain superfamily CS348_13950 IPR014710 RmlC-like jelly roll fold CS348_13950 IPR018060 DNA binding HTH domain, AraC-type CS348_13950 IPR018062 HTH domain AraC-type, conserved site CS348_13955 IPR011701 Major facilitator superfamily CS348_13955 IPR004747 Cyanate transport system protein CS348_13955 IPR036259 MFS transporter superfamily CS348_13955 IPR020846 Major facilitator superfamily domain CS348_13960 IPR007438 Protein of unknown function DUF488 CS348_13970 IPR005590 Protein of unknown function DUF333 CS348_13980 IPR007341 Transglycosylase-associated protein CS348_13995 IPR015051 Protein YoaG CS348_13995 IPR036489 YoaG superfamily CS348_14000 IPR014510 Tellurite resistance predicted, YeaR CS348_14000 IPR014710 RmlC-like jelly roll fold CS348_14000 IPR015392 Domain of unknown function DUF1971 CS348_14010 IPR001123 Amino acid exporter protein, LeuE-type CS348_14015 IPR036263 Chorismate mutase type II superfamily CS348_14015 IPR008240 Chorismate mutase, periplasmic CS348_14015 IPR002701 Chorismate mutase II, prokaryotic-type CS348_14035 IPR015358 Transcription regulator MerR, DNA binding CS348_14035 IPR000551 MerR-type HTH domain CS348_14035 IPR009061 Putative DNA-binding domain superfamily CS348_14035 IPR011789 Cu(I)-responsive transcriptional regulator CS348_14045 IPR002934 Polymerase, nucleotidyl transferase domain CS348_14045 IPR024172 Streptomycin 3''-adenylyltransferase CS348_14045 IPR025184 Domain of unknown function DUF4111 CS348_14050 IPR015304 ZinT domain CS348_14050 IPR012674 Calycin CS348_14065 IPR010920 LSM domain superfamily CS348_14065 IPR011066 Mechanosensitive ion channel MscS, C-terminal CS348_14065 IPR006685 Mechanosensitive ion channel MscS CS348_14065 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CS348_14065 IPR023408 Mechanosensitive ion channel MscS domain superfamily CS348_14065 IPR006686 Mechanosensitive ion channel MscS, conserved site CS348_14070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_14070 IPR014137 Nickel import ATP-binding protein NikE CS348_14070 IPR015858 ABC transporter, nickel import, NikE CS348_14070 IPR003439 ABC transporter-like CS348_14070 IPR017871 ABC transporter, conserved site CS348_14070 IPR003593 AAA+ ATPase domain CS348_14075 IPR003439 ABC transporter-like CS348_14075 IPR017871 ABC transporter, conserved site CS348_14075 IPR003593 AAA+ ATPase domain CS348_14075 IPR015857 ABC transporter, nickel import, NikD CS348_14075 IPR014138 Nickel import ATP-binding protein NikD CS348_14075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_14080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_14080 IPR035906 MetI-like superfamily CS348_14080 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CS348_14085 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_14085 IPR035906 MetI-like superfamily CS348_14090 IPR023765 Solute-binding protein family 5, conserved site CS348_14090 IPR000914 Solute-binding protein family 5 domain CS348_14090 IPR039424 Solute-binding protein family 5 CS348_14090 IPR030678 Peptide/nickel binding protein, MppA-type CS348_14100 IPR016174 Di-haem cytochrome, transmembrane CS348_14100 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CS348_14115 IPR008978 HSP20-like chaperone CS348_14115 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain CS348_14115 IPR002068 Alpha crystallin/Hsp20 domain CS348_14140 IPR000758 Virulence-related outer membrane protein CS348_14140 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CS348_14160 IPR012156 Cold shock, CspA CS348_14160 IPR012340 Nucleic acid-binding, OB-fold CS348_14160 IPR002059 Cold-shock protein, DNA-binding CS348_14160 IPR011129 Cold shock domain CS348_14160 IPR019844 Cold-shock (CSD) domain CS348_14165 IPR035992 Ricin B-like lectins CS348_14165 IPR000772 Ricin B, lectin domain CS348_14170 IPR036687 DinI-like superfamily CS348_14170 IPR010391 DNA damage-inducible protein DinI-like CS348_14180 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CS348_14180 IPR003539 Cytolethal distending toxin B CS348_14180 IPR005135 Endonuclease/exonuclease/phosphatase CS348_14200 IPR008992 Enterotoxin CS348_14215 IPR024084 Isopropylmalate dehydrogenase-like domain CS348_14215 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CS348_14215 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CS348_14220 IPR006145 Pseudouridine synthase, RsuA/RluA CS348_14220 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_14220 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CS348_14220 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CS348_14220 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CS348_14230 IPR020084 NUDIX hydrolase, conserved site CS348_14230 IPR000086 NUDIX hydrolase domain CS348_14230 IPR020476 NUDIX hydrolase CS348_14230 IPR033713 Phosphatase NudJ CS348_14230 IPR015797 NUDIX hydrolase-like domain superfamily CS348_14235 IPR004506 tRNA-specific 2-thiouridylase CS348_14235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_14235 IPR023382 Adenine nucleotide alpha hydrolase-like domains CS348_14240 IPR035932 HflD-like superfamily CS348_14240 IPR007451 High frequency lysogenization protein HflD CS348_14245 IPR013539 Adenylosuccinate lyase PurB, C-terminal CS348_14245 IPR000362 Fumarate lyase family CS348_14245 IPR022761 Fumarate lyase, N-terminal CS348_14245 IPR020557 Fumarate lyase, conserved site CS348_14245 IPR008948 L-Aspartase-like CS348_14245 IPR024083 Fumarase/histidase, N-terminal CS348_14245 IPR004769 Adenylosuccinate lyase CS348_14250 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_14250 IPR039420 Transcriptional regulatory protein WalR-like CS348_14250 IPR011006 CheY-like superfamily CS348_14250 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_14250 IPR001789 Signal transduction response regulator, receiver domain CS348_14255 IPR015014 PhoQ Sensor CS348_14255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_14255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_14255 IPR005467 Histidine kinase domain CS348_14255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_14255 IPR038429 PhoQ Sensor superfamily CS348_14255 IPR003594 Histidine kinase/HSP90-like ATPase CS348_14255 IPR003660 HAMP domain CS348_14260 IPR039994 JmjC domain-containing CS348_14260 IPR003347 JmjC domain CS348_14270 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CS348_14270 IPR010161 Peptidase M20B, tripeptide aminopeptidase CS348_14270 IPR036264 Bacterial exopeptidase dimerisation domain CS348_14270 IPR002933 Peptidase M20 CS348_14270 IPR011650 Peptidase M20, dimerisation domain CS348_14280 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CS348_14280 IPR017871 ABC transporter, conserved site CS348_14280 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_14280 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CS348_14280 IPR003593 AAA+ ATPase domain CS348_14280 IPR008995 Molybdate/tungstate binding, C-terminal CS348_14280 IPR013611 Transport-associated OB, type 2 CS348_14280 IPR003439 ABC transporter-like CS348_14285 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_14285 IPR035906 MetI-like superfamily CS348_14290 IPR010637 Sif CS348_14295 IPR035906 MetI-like superfamily CS348_14295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_14300 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CS348_14300 IPR006059 Bacterial extracellular solute-binding protein CS348_14305 IPR029035 DHS-like NAD/FAD-binding domain superfamily CS348_14305 IPR027546 Sirtuin, class III CS348_14305 IPR026591 Sirtuin, catalytic core small domain superfamily CS348_14305 IPR026590 Sirtuin family, catalytic core domain CS348_14305 IPR003000 Sirtuin family CS348_14310 IPR023505 N-acetyl-D-glucosamine kinase CS348_14310 IPR000600 ROK family CS348_14315 IPR003838 ABC transporter permease protein domain CS348_14315 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CS348_14315 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type CS348_14315 IPR025857 MacB-like periplasmic core domain CS348_14320 IPR017871 ABC transporter, conserved site CS348_14320 IPR015854 ABC transporter, lipoprotein release, LolD CS348_14320 IPR011924 Lipoprotein releasing system, ATP-binding protein CS348_14320 IPR003439 ABC transporter-like CS348_14320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_14320 IPR003593 AAA+ ATPase domain CS348_14325 IPR003838 ABC transporter permease protein domain CS348_14325 IPR025857 MacB-like periplasmic core domain CS348_14325 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CS348_14330 IPR041471 UvrB, interaction domain CS348_14330 IPR005118 Transcription-repair-coupling factor, C-terminal domain CS348_14330 IPR004576 Transcription-repair coupling factor CS348_14330 IPR001650 Helicase, C-terminal CS348_14330 IPR003711 CarD-like/TRCF domain CS348_14330 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_14330 IPR036101 CarD-like/TRCF domain superfamily CS348_14330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_14330 IPR011545 DEAD/DEAH box helicase domain CS348_14330 IPR037235 TRCF-like, C-terminal domain CS348_14340 IPR036275 YdgH-like superfamily CS348_14340 IPR010854 Domain of unknown function DUF1471 CS348_14340 IPR025543 Dodecin-like CS348_14345 IPR001647 DNA-binding HTH domain, TetR-type CS348_14345 IPR009057 Homeobox-like domain superfamily CS348_14345 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_14350 IPR008816 Glycine zipper 2TM domain CS348_14355 IPR023753 FAD/NAD(P)-binding domain CS348_14355 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_14360 IPR022987 Uncharacterised protein family UPF0227 CS348_14360 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CS348_14360 IPR029058 Alpha/Beta hydrolase fold CS348_14365 IPR001764 Glycoside hydrolase, family 3, N-terminal CS348_14365 IPR019800 Glycoside hydrolase, family 3, active site CS348_14365 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CS348_14365 IPR022956 Beta-hexosaminidase, bacterial CS348_14365 IPR017853 Glycoside hydrolase superfamily CS348_14370 IPR011009 Protein kinase-like domain superfamily CS348_14370 IPR014093 Thiamine kinase CS348_14370 IPR002575 Aminoglycoside phosphotransferase CS348_14375 IPR014094 Penicillin-binding protein activator LpoB CS348_14380 IPR038483 YcfL-like superfamily CS348_14380 IPR010824 Protein of unknown function DUF1425 CS348_14385 IPR019808 Histidine triad, conserved site CS348_14385 IPR001310 Histidine triad (HIT) protein CS348_14385 IPR036265 HIT-like superfamily CS348_14385 IPR011146 HIT-like domain CS348_14390 IPR039423 TonB-dependent receptor-like CS348_14390 IPR037066 TonB-dependent receptor, plug domain superfamily CS348_14390 IPR010105 TonB-dependent siderophore receptor CS348_14390 IPR000531 TonB-dependent receptor-like, beta-barrel CS348_14390 IPR010917 TonB-dependent receptor, conserved site CS348_14390 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CS348_14390 IPR010916 TonB box, conserved site CS348_14390 IPR012910 TonB-dependent receptor, plug domain CS348_14395 IPR013013 Phosphotransferase system, EIIC component, type 1 CS348_14395 IPR003352 Phosphotransferase system, EIIC CS348_14395 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CS348_14395 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CS348_14395 IPR001996 Phosphotransferase system, IIB component, type 1 CS348_14395 IPR036878 Glucose permease domain IIB CS348_14395 IPR011299 PTS system glucose-specific IIBC component CS348_14400 IPR015991 Uncharacterised hydrolase TatD-type CS348_14400 IPR032466 Metal-dependent hydrolase CS348_14400 IPR018228 Deoxyribonuclease, TatD-related, conserved site CS348_14400 IPR001130 TatD family CS348_14405 IPR004622 DNA polymerase III, delta prime subunit CS348_14405 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CS348_14405 IPR015199 DNA polymerase III, delta subunit, C-terminal CS348_14405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_14410 IPR039430 Thymidylate kinase-like domain CS348_14410 IPR018094 Thymidylate kinase CS348_14410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_14410 IPR018095 Thymidylate kinase, conserved site CS348_14415 IPR003770 Endolytic murein transglycosylase CS348_14420 IPR036038 Aminotransferase-like, PLP-dependent enzymes CS348_14420 IPR017824 Aminodeoxychorismate lyase, class IV CS348_14420 IPR001544 Aminotransferase class IV CS348_14420 IPR018300 Aminotransferase, class IV, conserved site CS348_14425 IPR036937 Fimbrial-type adhesion domain superfamily CS348_14425 IPR008966 Adhesion domain superfamily CS348_14425 IPR000259 Fimbrial-type adhesion domain CS348_14430 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_14430 IPR001829 Pili assembly chaperone, bacterial CS348_14430 IPR008962 PapD-like superfamily CS348_14430 IPR013783 Immunoglobulin-like fold CS348_14430 IPR016148 Pili assembly chaperone, C-terminal CS348_14430 IPR016147 Pili assembly chaperone, N-terminal CS348_14430 IPR018046 Pili assembly chaperone, conserved site CS348_14435 IPR042186 Outer membrane usher protein FimD, plug domain CS348_14435 IPR000015 Outer membrane usher protein CS348_14435 IPR025949 PapC-like, C-terminal domain CS348_14435 IPR025885 PapC, N-terminal domain CS348_14435 IPR037224 PapC, N-terminal domain superfamily CS348_14435 IPR018030 Fimbrial membrane usher, conserved site CS348_14455 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CS348_14455 IPR014030 Beta-ketoacyl synthase, N-terminal CS348_14455 IPR014031 Beta-ketoacyl synthase, C-terminal CS348_14455 IPR018201 Beta-ketoacyl synthase, active site CS348_14455 IPR016039 Thiolase-like CS348_14455 IPR000794 Beta-ketoacyl synthase CS348_14455 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CS348_14460 IPR003231 Acyl carrier protein (ACP) CS348_14460 IPR006162 Phosphopantetheine attachment site CS348_14460 IPR009081 Phosphopantetheine binding ACP domain CS348_14460 IPR036736 ACP-like superfamily CS348_14465 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_14465 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CS348_14465 IPR036291 NAD(P)-binding domain superfamily CS348_14465 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_14470 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CS348_14470 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CS348_14470 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CS348_14470 IPR024925 Malonyl CoA-acyl carrier protein transacylase CS348_14470 IPR014043 Acyl transferase CS348_14470 IPR001227 Acyl transferase domain superfamily CS348_14475 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CS348_14475 IPR016039 Thiolase-like CS348_14475 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CS348_14475 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CS348_14480 IPR012281 Phospholipid biosynthesis protein, PlsX-like CS348_14480 IPR003664 Fatty acid synthesis PlsX protein CS348_14485 IPR002677 Ribosomal protein L32p CS348_14485 IPR011332 Zinc-binding ribosomal protein CS348_14490 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CS348_14490 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria CS348_14495 IPR029001 Inosine triphosphate pyrophosphatase-like CS348_14495 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CS348_14510 IPR006225 Pseudouridine synthase, RluC/RluD CS348_14510 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_14510 IPR036986 RNA-binding S4 domain superfamily CS348_14510 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CS348_14510 IPR002942 RNA-binding S4 domain CS348_14510 IPR006145 Pseudouridine synthase, RsuA/RluA CS348_14520 IPR003029 S1 domain CS348_14520 IPR022967 RNA-binding domain, S1 CS348_14520 IPR004659 Ribonuclease E/G CS348_14520 IPR028878 Ribonuclease E CS348_14520 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CS348_14520 IPR021968 Polyribonucleotide phosphorylase C-terminal CS348_14520 IPR012340 Nucleic acid-binding, OB-fold CS348_14525 IPR001029 Flagellin, D0/D1 domain CS348_14525 IPR013384 Flagellar hook-associated protein 3 CS348_14530 IPR019776 Flagellar basal body rod protein, conserved site CS348_14530 IPR002371 Flagellar hook-associated protein 1 CS348_14530 IPR001444 Flagellar basal body rod protein, N-terminal CS348_14530 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CS348_14535 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CS348_14535 IPR019301 Flagellar protein FlgJ, N-terminal CS348_14535 IPR013377 Peptidoglycan hydrolase FlgJ CS348_14540 IPR001782 Flagellar P-ring protein CS348_14545 IPR000527 Flagellar L-ring protein CS348_14550 IPR012834 Flagellar basal-body rod FlgG CS348_14550 IPR001444 Flagellar basal body rod protein, N-terminal CS348_14550 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CS348_14550 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CS348_14550 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CS348_14550 IPR019776 Flagellar basal body rod protein, conserved site CS348_14555 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CS348_14555 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CS348_14555 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CS348_14555 IPR019776 Flagellar basal body rod protein, conserved site CS348_14555 IPR001444 Flagellar basal body rod protein, N-terminal CS348_14560 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CS348_14560 IPR001444 Flagellar basal body rod protein, N-terminal CS348_14560 IPR019776 Flagellar basal body rod protein, conserved site CS348_14560 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CS348_14560 IPR011491 Flagellar hook protein FlgE CS348_14560 IPR037058 Flagellar hook protein FlgE superfamily CS348_14560 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CS348_14565 IPR025963 FlgD Tudor-like domain CS348_14565 IPR025965 FlgD Ig-like domain CS348_14565 IPR005648 Flagellar hook capping protein CS348_14570 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CS348_14570 IPR006299 Flagellar basal-body rod protein FlgC CS348_14570 IPR019776 Flagellar basal body rod protein, conserved site CS348_14570 IPR001444 Flagellar basal body rod protein, N-terminal CS348_14575 IPR001444 Flagellar basal body rod protein, N-terminal CS348_14575 IPR019776 Flagellar basal body rod protein, conserved site CS348_14575 IPR006300 Flagellar basal-body rod protein FlgB CS348_14585 IPR039246 Flagellar protein FlgA CS348_14585 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CS348_14585 IPR013974 SAF domain CS348_14590 IPR007412 Anti-sigma-28 factor, FlgM CS348_14590 IPR035890 Anti-sigma-28 factor FlgM superfamily CS348_14590 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CS348_14595 IPR007809 FlgN-like protein CS348_14595 IPR036679 FlgN-like superfamily CS348_14600 IPR004268 Peptidoglycan biosynthesis protein MurJ CS348_14605 IPR000683 Oxidoreductase, N-terminal CS348_14605 IPR036291 NAD(P)-binding domain superfamily CS348_14610 IPR036390 Winged helix DNA-binding domain superfamily CS348_14610 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_14610 IPR007432 Protein of unknown function DUF480 CS348_14615 IPR016181 Acyl-CoA N-acyltransferase CS348_14615 IPR000182 GNAT domain CS348_14620 IPR011701 Major facilitator superfamily CS348_14620 IPR022855 Multidrug resistance protein MdtH CS348_14620 IPR020846 Major facilitator superfamily domain CS348_14620 IPR036259 MFS transporter superfamily CS348_14625 IPR011901 Glutaredoxin-2 CS348_14625 IPR036249 Thioredoxin-like superfamily CS348_14625 IPR004045 Glutathione S-transferase, N-terminal CS348_14625 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CS348_14625 IPR007494 Glutaredoxin 2, C-terminal CS348_14625 IPR011767 Glutaredoxin active site CS348_14630 IPR010835 Protein of unknown function DUF1439 CS348_14635 IPR004721 Dihydroorotase homodimeric type CS348_14635 IPR002195 Dihydroorotase, conserved site CS348_14635 IPR006680 Amidohydrolase-related CS348_14635 IPR032466 Metal-dependent hydrolase CS348_14640 IPR010391 DNA damage-inducible protein DinI-like CS348_14640 IPR036687 DinI-like superfamily CS348_14645 IPR025730 Biofilm regulator BssS CS348_14650 IPR023493 N-methyl-L-tryptophan oxidase MTOX CS348_14650 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_14650 IPR006076 FAD dependent oxidoreductase CS348_14655 IPR024494 Protein of unknown function DUF2770 CS348_14665 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CS348_14665 IPR016174 Di-haem cytochrome, transmembrane CS348_14670 IPR023480 Uncharacterised protein family UPF0312/YceI CS348_14670 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CS348_14670 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CS348_14680 IPR004960 Bacterial lipid A biosynthesis acyltransferase CS348_14680 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase CS348_14690 IPR023692 Multidrug resistance protein MdtG CS348_14690 IPR036259 MFS transporter superfamily CS348_14690 IPR020846 Major facilitator superfamily domain CS348_14690 IPR011701 Major facilitator superfamily CS348_14690 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CS348_14695 IPR025729 MsyB protein CS348_14700 IPR010780 Protein of unknown function DUF1375 CS348_14705 IPR023725 Glucan biosynthesis glucosyltransferase H CS348_14705 IPR001173 Glycosyltransferase 2-like CS348_14705 IPR029044 Nucleotide-diphospho-sugar transferases CS348_14710 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal CS348_14710 IPR014756 Immunoglobulin E-set CS348_14710 IPR023704 Glucan biosynthesis protein G CS348_14710 IPR013783 Immunoglobulin-like fold CS348_14710 IPR014718 Glycoside hydrolase-type carbohydrate-binding CS348_14710 IPR014438 Glucan biosynthesis protein MdoG/MdoD CS348_14710 IPR011013 Galactose mutarotase-like domain superfamily CS348_14715 IPR002656 Acyltransferase 3 CS348_14715 IPR023723 Glucan biosynthesis protein C CS348_14720 IPR030871 Cardiolipin synthase C CS348_14720 IPR001736 Phospholipase D/Transphosphatidylase CS348_14720 IPR025202 Phospholipase D-like domain CS348_14725 IPR024900 O-acetyl-ADP-ribose deacetylase CS348_14725 IPR002589 Macro domain CS348_14735 IPR014491 Curli production protein CsgC CS348_14740 IPR009742 Curlin associated CS348_14745 IPR009742 Curlin associated CS348_14750 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_14750 IPR000792 Transcription regulator LuxR, C-terminal CS348_14750 IPR016032 Signal transduction response regulator, C-terminal effector CS348_14755 IPR018900 Curli assembly protein CsgE CS348_14760 IPR018893 Type VIII secretion system, CsgF CS348_14765 IPR005534 Curli production assembly/transport component CsgG CS348_14770 IPR009476 Protein of unknown function DUF1097 CS348_14775 IPR026269 Tat proofreading chaperone DmsD-type CS348_14775 IPR020945 DMSO/Nitrate reductase chaperone CS348_14775 IPR036411 TorD-like superfamily CS348_14780 IPR003141 Polymerase/histidinol phosphatase, N-terminal CS348_14780 IPR023710 Probable phosphatase YcdX CS348_14780 IPR016195 Polymerase/histidinol phosphatase-like CS348_14780 IPR004013 PHP domain CS348_14785 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CS348_14785 IPR023514 Glyoxylate/hydroxypyruvate reductase A CS348_14785 IPR036291 NAD(P)-binding domain superfamily CS348_14805 IPR004104 Oxidoreductase, C-terminal CS348_14805 IPR000683 Oxidoreductase, N-terminal CS348_14805 IPR036291 NAD(P)-binding domain superfamily CS348_14810 IPR011701 Major facilitator superfamily CS348_14810 IPR036259 MFS transporter superfamily CS348_14810 IPR020846 Major facilitator superfamily domain CS348_14815 IPR009331 Oligogalacturonate-specific porin CS348_14820 IPR019936 Mutatrotase, YjhT-like CS348_14820 IPR006652 Kelch repeat type 1 CS348_14820 IPR015915 Kelch-type beta propeller CS348_14825 IPR013785 Aldolase-type TIM barrel CS348_14825 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase CS348_14825 IPR011060 Ribulose-phosphate binding barrel CS348_14835 IPR038377 Sodium/glucose symporter superfamily CS348_14835 IPR001734 Sodium/solute symporter CS348_14840 IPR000281 Helix-turn-helix protein RpiR CS348_14840 IPR009057 Homeobox-like domain superfamily CS348_14840 IPR035472 RpiR-like, SIS domain CS348_14840 IPR001347 Sugar isomerase (SIS) CS348_14840 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_14845 IPR003714 PhoH-like protein CS348_14845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_14855 IPR038377 Sodium/glucose symporter superfamily CS348_14855 IPR011851 Sodium/proline symporter CS348_14855 IPR018212 Sodium/solute symporter, conserved site CS348_14855 IPR001734 Sodium/solute symporter CS348_14875 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_14875 IPR019915 Transcription regulator, pyrimidine utilisation, RutR CS348_14875 IPR001647 DNA-binding HTH domain, TetR-type CS348_14875 IPR009057 Homeobox-like domain superfamily CS348_14875 IPR013573 Transcription regulator YcdC, C-terminal CS348_14880 IPR019626 Stress-induced protein, KGG, repeat CS348_14885 IPR008254 Flavodoxin/nitric oxide synthase CS348_14885 IPR029039 Flavoprotein-like superfamily CS348_14885 IPR010089 Flavoprotein WrbA-like CS348_14885 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic CS348_14885 IPR005025 NADPH-dependent FMN reductase-like CS348_14890 IPR025600 YccJ-like protein CS348_14895 IPR029033 Histidine phosphatase superfamily CS348_14895 IPR000560 Histidine phosphatase superfamily, clade-2 CS348_14895 IPR033379 Histidine acid phosphatase active site CS348_14900 IPR036249 Thioredoxin-like superfamily CS348_14900 IPR017937 Thioredoxin, conserved site CS348_14900 IPR013766 Thioredoxin domain CS348_14900 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CS348_14905 IPR013766 Thioredoxin domain CS348_14905 IPR012336 Thioredoxin-like fold CS348_14905 IPR036249 Thioredoxin-like superfamily CS348_14905 IPR023171 Na/H antiporter domain superfamily CS348_14905 IPR004670 Na+/H+ antiporter NhaA CS348_14910 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CS348_14910 IPR013766 Thioredoxin domain CS348_14910 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CS348_14910 IPR022910 Thiol:disulphide interchange protein DsbD CS348_14910 IPR035671 DsbD gamma CS348_14910 IPR012336 Thioredoxin-like fold CS348_14910 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CS348_14910 IPR017937 Thioredoxin, conserved site CS348_14910 IPR036249 Thioredoxin-like superfamily CS348_14925 IPR023859 DNA-binding protein, curved-DNA CS348_14925 IPR036869 Chaperone J-domain superfamily CS348_14925 IPR008971 HSP40/DnaJ peptide-binding CS348_14925 IPR018253 DnaJ domain, conserved site CS348_14925 IPR001623 DnaJ domain CS348_14925 IPR002939 Chaperone DnaJ, C-terminal CS348_14930 IPR022835 Chaperone modulatory protein CbpM CS348_14940 IPR014448 Anti-adapter protein IraM CS348_14945 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CS348_14945 IPR001279 Metallo-beta-lactamase CS348_14945 IPR013471 Ribonuclease Z/BN CS348_14955 IPR020846 Major facilitator superfamily domain CS348_14955 IPR036259 MFS transporter superfamily CS348_14955 IPR011701 Major facilitator superfamily CS348_14960 IPR040442 Pyruvate kinase-like domain superfamily CS348_14960 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_14960 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales CS348_14960 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase CS348_14960 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CS348_14965 IPR011234 Fumarylacetoacetase-like, C-terminal CS348_14965 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CS348_14965 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase CS348_14970 IPR014347 Tautomerase/MIF superfamily CS348_14970 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase CS348_14975 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B CS348_14975 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase CS348_14980 IPR016161 Aldehyde/histidinol dehydrogenase CS348_14980 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CS348_14980 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_14980 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase CS348_14980 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_14980 IPR016160 Aldehyde dehydrogenase, cysteine active site CS348_14980 IPR015590 Aldehyde dehydrogenase domain CS348_14985 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit CS348_14985 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit CS348_14985 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CS348_14985 IPR011234 Fumarylacetoacetase-like, C-terminal CS348_14990 IPR023187 Transcriptional regulator MarR-type, conserved site CS348_14990 IPR036390 Winged helix DNA-binding domain superfamily CS348_14990 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_14990 IPR000835 MarR-type HTH domain CS348_14990 IPR012712 HTH-type transcriptional regulator HpaR/FarR CS348_14995 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CS348_14995 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CS348_14995 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein CS348_14995 IPR004925 HpaB/PvcC/4-BUDH CS348_14995 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria CS348_14995 IPR024719 HpaB/PvcC/4-BUDH C-terminal CS348_14995 IPR024674 HpaB/PvcC/4-BUDH N-terminal CS348_15000 IPR012349 FMN-binding split barrel CS348_15000 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component CS348_15000 IPR002563 Flavin reductase like domain CS348_15010 IPR023419 Transthyretin, conserved site CS348_15010 IPR023418 Transthyretin, thyroxine binding site CS348_15010 IPR000895 Transthyretin/hydroxyisourate hydrolase CS348_15010 IPR014306 Hydroxyisourate hydrolase CS348_15010 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily CS348_15010 IPR023416 Transthyretin/hydroxyisourate hydrolase domain CS348_15015 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response CS348_15015 IPR016032 Signal transduction response regulator, C-terminal effector CS348_15015 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_15015 IPR039420 Transcriptional regulatory protein WalR-like CS348_15015 IPR011006 CheY-like superfamily CS348_15015 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_15015 IPR001789 Signal transduction response regulator, receiver domain CS348_15020 IPR003660 HAMP domain CS348_15020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_15020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_15020 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_15020 IPR006290 Heavy metal sensor kinase CS348_15020 IPR005467 Histidine kinase domain CS348_15020 IPR003594 Histidine kinase/HSP90-like ATPase CS348_15020 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_15025 IPR005322 Peptidase C69, dipeptidase A CS348_15035 IPR025030 Domain of unknown function DUF3950 CS348_15040 IPR008108 Phosphatase IpgD/SopB CS348_15045 IPR013095 Type III secretion system chaperone CS348_15055 IPR001646 Pentapeptide repeat CS348_15070 IPR006213 Bax inhibitor 1, conserved site CS348_15070 IPR006214 Bax inhibitor 1-related CS348_15075 IPR007453 Sulphur transfer protein DsrC/TusE CS348_15075 IPR025526 DsrC-like domain superfamily CS348_15075 IPR042072 DsrC-like protein, C-terminal domain CS348_15080 IPR017968 Acylphosphatase, conserved site CS348_15080 IPR020456 Acylphosphatase CS348_15080 IPR036046 Acylphosphatase-like domain superfamily CS348_15080 IPR001792 Acylphosphatase-like domain CS348_15080 IPR028627 Acylphosphatase, bacteria CS348_15085 IPR009057 Homeobox-like domain superfamily CS348_15085 IPR020449 Transcription regulator HTH, AraC- type CS348_15085 IPR018062 HTH domain AraC-type, conserved site CS348_15085 IPR018060 DNA binding HTH domain, AraC-type CS348_15090 IPR036610 PEBP-like superfamily CS348_15090 IPR005247 YbhB/YbcL CS348_15090 IPR008914 Phosphatidylethanolamine-binding protein CS348_15095 IPR041532 RlmI, PUA-like domain CS348_15095 IPR036974 PUA domain superfamily CS348_15095 IPR023542 rRNA large subunit methyltransferase I CS348_15095 IPR002478 PUA domain CS348_15095 IPR015947 PUA-like superfamily CS348_15095 IPR019614 S-adenosylmethionine-dependent methyltransferase CS348_15095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_15100 IPR011722 Hemimethylated DNA-binding domain CS348_15100 IPR022866 Heat shock protein HspQ CS348_15100 IPR036623 Hemimethylated DNA-binding domain superfamily CS348_15105 IPR003781 CoA-binding CS348_15105 IPR036291 NAD(P)-binding domain superfamily CS348_15110 IPR018635 Uncharacterised protein family UPF0319 CS348_15115 IPR004363 Methylglyoxal synthase CS348_15115 IPR018148 Methylglyoxal synthase, active site CS348_15115 IPR036914 Methylglyoxal synthase-like domain superfamily CS348_15115 IPR011607 Methylglyoxal synthase-like domain CS348_15120 IPR014017 UvrD-like DNA helicase, C-terminal CS348_15120 IPR000212 DNA helicase, UvrD/REP type CS348_15120 IPR022161 DNA helicase IV, N-terminal domain CS348_15120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15120 IPR014016 UvrD-like helicase, ATP-binding domain CS348_15120 IPR034739 UvrD/AddA helicase, N-terminal CS348_15125 IPR031308 Uncharacterised conserved protein UCP028777 CS348_15125 IPR005185 Inner membrane component domain CS348_15130 IPR010019 Integral membrane protein, YccS CS348_15130 IPR010020 Integral membrane protein, YccS/YhfK CS348_15130 IPR032692 Integral membrane protein YccS, N-terminal CS348_15135 IPR007076 TfoX, N-terminal CS348_15135 IPR007077 TfoX, C-terminal CS348_15135 IPR026256 Transcriptional regulator, TfoX/Sxy-type CS348_15140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15140 IPR004596 Cell division suppressor protein, SulA CS348_15145 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CS348_15145 IPR006690 Outer membrane protein, OmpA-like, conserved site CS348_15145 IPR006665 OmpA-like domain CS348_15145 IPR002368 Outer membrane protein, OmpA CS348_15145 IPR006664 Outer membrane protein, bacterial CS348_15145 IPR000498 Outer membrane protein OmpA-like, transmembrane domain CS348_15145 IPR036737 OmpA-like domain superfamily CS348_15150 IPR038339 MatP, N-terminal domain superfamily CS348_15150 IPR035087 MatP, N-terminal CS348_15150 IPR035375 MatP, C-terminal ribbon-helix-helix domain CS348_15150 IPR009390 Macrodomain Ter protein, MatP CS348_15150 IPR013321 Arc-type ribbon-helix-helix CS348_15155 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_15155 IPR027065 Lon protease CS348_15155 IPR041699 Lon protease, AAA domain CS348_15155 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_15155 IPR008269 Peptidase S16, Lon proteolytic domain CS348_15160 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA CS348_15160 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CS348_15160 IPR029069 HotDog domain superfamily CS348_15165 IPR023200 Ribosome modulation factor domain superfamily CS348_15165 IPR007040 Ribosome modulation factor CS348_15170 IPR005586 ABC-type transport auxiliary lipoprotein component CS348_15175 IPR003399 Mce/MlaD CS348_15180 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type CS348_15180 IPR007498 Intermembrane transport protein PqiA-like CS348_15185 IPR003593 AAA+ ATPase domain CS348_15185 IPR017871 ABC transporter, conserved site CS348_15185 IPR003439 ABC transporter-like CS348_15185 IPR032781 ABC-transporter extension domain CS348_15185 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CS348_15185 IPR032524 ABC transporter Uup, C-terminal CS348_15185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_15190 IPR004114 THUMP domain CS348_15190 IPR000241 Putative RNA methylase domain CS348_15190 IPR017244 Ribosomal RNA large subunit methyltransferase K/L CS348_15190 IPR019614 S-adenosylmethionine-dependent methyltransferase CS348_15190 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_15195 IPR005302 Molybdenum cofactor sulfurase, C-terminal CS348_15195 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CS348_15195 IPR012675 Beta-grasp domain superfamily CS348_15195 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CS348_15195 IPR011037 Pyruvate kinase-like, insert domain superfamily CS348_15195 IPR036010 2Fe-2S ferredoxin-like superfamily CS348_15195 IPR005303 MOSC, N-terminal beta barrel CS348_15200 IPR009809 Cell division protein ZapC CS348_15205 IPR001295 Dihydroorotate dehydrogenase, conserved site CS348_15205 IPR013785 Aldolase-type TIM barrel CS348_15205 IPR005720 Dihydroorotate dehydrogenase domain CS348_15205 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CS348_15205 IPR005719 Dihydroorotate dehydrogenase, class 2 CS348_15210 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily CS348_15210 IPR042097 Aminopeptidase N-like , N-terminal CS348_15210 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CS348_15210 IPR027268 Peptidase M4/M1, CTD superfamily CS348_15210 IPR014782 Peptidase M1, membrane alanine aminopeptidase CS348_15210 IPR012779 Peptidase M1, alanyl aminopeptidase CS348_15210 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CS348_15210 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily CS348_15210 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CS348_15215 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain CS348_15215 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CS348_15215 IPR006406 Nicotinate phosphoribosyltransferase CS348_15215 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase CS348_15215 IPR007229 Nicotinate phosphoribosyltransferase family CS348_15220 IPR004522 Asparagine-tRNA ligase CS348_15220 IPR012340 Nucleic acid-binding, OB-fold CS348_15220 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CS348_15220 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CS348_15220 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CS348_15220 IPR006195 Aminoacyl-tRNA synthetase, class II CS348_15225 IPR001702 Porin, Gram-negative type CS348_15225 IPR001897 Porin, gammaproteobacterial CS348_15225 IPR033900 Porin domain, Gram-negative type CS348_15225 IPR023614 Porin domain superfamily CS348_15225 IPR013793 Porin, Gram-negative type, conserved site CS348_15230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_15230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_15230 IPR015424 Pyridoxal phosphate-dependent transferase CS348_15230 IPR000796 Aspartate/other aminotransferase CS348_15230 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CS348_15230 IPR004839 Aminotransferase, class I/classII CS348_15235 IPR001279 Metallo-beta-lactamase CS348_15235 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CS348_15240 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CS348_15240 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_15240 IPR010275 Protein of unknown function DUF882 CS348_15250 IPR036365 PGBD-like superfamily CS348_15250 IPR002477 Peptidoglycan binding-like CS348_15250 IPR038063 L,D-transpeptidase catalytic domain-like CS348_15250 IPR005490 L,D-transpeptidase catalytic domain CS348_15255 IPR032520 MukB, hinge domain CS348_15255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15255 IPR007406 MukB, N-terminal domain CS348_15255 IPR012090 Chromosome partition protein MukB CS348_15260 IPR042038 MukE, N-terminal domain CS348_15260 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE CS348_15260 IPR042037 MukE, C-terminal domain CS348_15265 IPR036141 MukF, middle domain superfamily CS348_15265 IPR033439 Chromosome partition protein MukF, winged-helix domain CS348_15265 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_15265 IPR036390 Winged helix DNA-binding domain superfamily CS348_15265 IPR033441 Chromosome partition protein MukF, C-terminal domain CS348_15265 IPR033440 Chromosome partition protein MukF, middle domain CS348_15265 IPR038198 MukF, C-terminal domain superfamily CS348_15265 IPR005582 Chromosome partition protein MukF CS348_15270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_15270 IPR025714 Methyltransferase domain CS348_15270 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase CS348_15275 IPR003848 Domain of unknown function DUF218 CS348_15280 IPR002575 Aminoglycoside phosphotransferase CS348_15280 IPR011009 Protein kinase-like domain superfamily CS348_15285 IPR029044 Nucleotide-diphospho-sugar transferases CS348_15285 IPR003329 Acylneuraminate cytidylyltransferase CS348_15285 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CS348_15290 IPR005651 Trm112-like CS348_15295 IPR009351 Protein of unknown function DUF1006 CS348_15300 IPR003758 Tetraacyldisaccharide 4'-kinase CS348_15300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15305 IPR011917 ABC transporter, lipid A export, MsbA CS348_15305 IPR017871 ABC transporter, conserved site CS348_15305 IPR003439 ABC transporter-like CS348_15305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15305 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_15305 IPR039421 Type I protein exporter CS348_15305 IPR003593 AAA+ ATPase domain CS348_15305 IPR011527 ABC transporter type 1, transmembrane domain CS348_15310 IPR001279 Metallo-beta-lactamase CS348_15310 IPR004797 Competence protein ComEC/Rec2 CS348_15310 IPR004477 ComEC/Rec2-related protein CS348_15310 IPR035681 ComA-like, MBL domain CS348_15310 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CS348_15315 IPR005685 Integration host factor, beta subunit CS348_15315 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CS348_15315 IPR020816 Histone-like DNA-binding protein, conserved site CS348_15315 IPR000119 Histone-like DNA-binding protein CS348_15320 IPR012340 Nucleic acid-binding, OB-fold CS348_15320 IPR003029 S1 domain CS348_15320 IPR022967 RNA-binding domain, S1 CS348_15320 IPR000110 Ribosomal protein S1 CS348_15325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15325 IPR003136 Cytidylate kinase CS348_15325 IPR011994 Cytidylate kinase domain CS348_15330 IPR001915 Peptidase M48 CS348_15335 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CS348_15335 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CS348_15335 IPR036968 Enolpyruvate transferase domain superfamily CS348_15335 IPR001986 Enolpyruvate transferase domain CS348_15335 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CS348_15340 IPR000192 Aminotransferase class V domain CS348_15340 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CS348_15340 IPR015424 Pyridoxal phosphate-dependent transferase CS348_15340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_15340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_15340 IPR022278 Phosphoserine aminotransferase CS348_15345 IPR023090 UPF0702, alpha/beta domain superfamily CS348_15345 IPR007353 Protein of unknown function DUF421 CS348_15350 IPR003776 YcaO-like domain CS348_15350 IPR041080 YcaO cyclodehydratase, C-terminal CS348_15355 IPR023271 Aquaporin-like CS348_15355 IPR024002 Formate/nitrite transporter, conserved site CS348_15355 IPR000292 Formate/nitrite transporter CS348_15355 IPR023999 Formate transporter FocA, putative CS348_15360 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CS348_15360 IPR005949 Formate acetyltransferase CS348_15360 IPR001150 Glycine radical domain CS348_15360 IPR004184 Pyruvate formate lyase domain CS348_15365 IPR022747 Salmonella outer protein D CS348_15370 IPR013785 Aldolase-type TIM barrel CS348_15370 IPR034457 Organic radical-activating enzymes CS348_15370 IPR012839 Organic radical enzyme activase CS348_15370 IPR007197 Radical SAM CS348_15370 IPR001989 Radical-activating enzyme, conserved site CS348_15370 IPR034465 Pyruvate formate-lyase activase CS348_15370 IPR012838 Pyruvate formate-lyase 1 activating enzyme CS348_15375 IPR002293 Amino acid/polyamine transporter I CS348_15380 IPR020846 Major facilitator superfamily domain CS348_15380 IPR023745 MSF-type transporter, YcaD CS348_15380 IPR011701 Major facilitator superfamily CS348_15380 IPR036259 MFS transporter superfamily CS348_15385 IPR007059 DMSO reductase anchor subunit (DmsC) CS348_15390 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_15390 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_15390 IPR014297 Dimethylsulphoxide reductase, chain B CS348_15395 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_15395 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_15395 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_15395 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_15395 IPR006656 Molybdopterin oxidoreductase CS348_15395 IPR006657 Molybdopterin dinucleotide-binding domain CS348_15395 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_15395 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CS348_15395 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_15400 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CS348_15400 IPR033729 Serine-tRNA ligase catalytic core domain CS348_15400 IPR015866 Serine-tRNA synthetase, type1, N-terminal CS348_15400 IPR002317 Serine-tRNA ligase, type1 CS348_15400 IPR006195 Aminoacyl-tRNA synthetase, class II CS348_15400 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CS348_15400 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CS348_15405 IPR021886 MgsA AAA+ ATPase C-terminal CS348_15405 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CS348_15405 IPR003593 AAA+ ATPase domain CS348_15405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15405 IPR003959 ATPase, AAA-type, core CS348_15405 IPR032423 AAA C-terminal domain CS348_15410 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CS348_15410 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CS348_15410 IPR029046 Lipoprotein localisation LolA/LolB/LppX CS348_15415 IPR036390 Winged helix DNA-binding domain superfamily CS348_15415 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_15415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15415 IPR018541 FtsK gamma domain CS348_15415 IPR041027 FtsK alpha domain CS348_15415 IPR025199 DNA translocase FtsK, 4TM region CS348_15415 IPR002543 FtsK domain CS348_15420 IPR000485 AsnC-type HTH domain CS348_15420 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CS348_15420 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CS348_15420 IPR019888 Transcription regulator AsnC-type CS348_15420 IPR011991 ArsR-like helix-turn-helix domain CS348_15420 IPR036390 Winged helix DNA-binding domain superfamily CS348_15420 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_15420 IPR011008 Dimeric alpha-beta barrel CS348_15430 IPR023753 FAD/NAD(P)-binding domain CS348_15430 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CS348_15430 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_15430 IPR005982 Thioredoxin reductase CS348_15435 IPR003439 ABC transporter-like CS348_15435 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_15435 IPR003593 AAA+ ATPase domain CS348_15435 IPR039421 Type I protein exporter CS348_15435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15435 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CS348_15435 IPR017871 ABC transporter, conserved site CS348_15435 IPR011527 ABC transporter type 1, transmembrane domain CS348_15440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15440 IPR017871 ABC transporter, conserved site CS348_15440 IPR003439 ABC transporter-like CS348_15440 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CS348_15440 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_15440 IPR011527 ABC transporter type 1, transmembrane domain CS348_15440 IPR003593 AAA+ ATPase domain CS348_15445 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal CS348_15445 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CS348_15445 IPR016181 Acyl-CoA N-acyltransferase CS348_15455 IPR012340 Nucleic acid-binding, OB-fold CS348_15455 IPR022967 RNA-binding domain, S1 CS348_15455 IPR006196 RNA-binding domain, S1, IF1 type CS348_15455 IPR004368 Translation initiation factor IF-1 CS348_15460 IPR005119 LysR, substrate-binding CS348_15460 IPR000847 Transcription regulator HTH, LysR CS348_15460 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_15460 IPR036390 Winged helix DNA-binding domain superfamily CS348_15465 IPR011051 RmlC-like cupin domain superfamily CS348_15465 IPR012093 Pirin CS348_15465 IPR008778 Pirin, C-terminal domain CS348_15465 IPR003829 Pirin, N-terminal domain CS348_15465 IPR014710 RmlC-like jelly roll fold CS348_15470 IPR036380 Isochorismatase-like superfamily CS348_15470 IPR000868 Isochorismatase-like CS348_15480 IPR003959 ATPase, AAA-type, core CS348_15480 IPR003593 AAA+ ATPase domain CS348_15480 IPR036628 Clp, N-terminal domain superfamily CS348_15480 IPR004176 Clp, N-terminal CS348_15480 IPR028299 ClpA/B, conserved site 2 CS348_15480 IPR041546 ClpA/ClpB, AAA lid domain CS348_15480 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CS348_15480 IPR019489 Clp ATPase, C-terminal CS348_15480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15480 IPR018368 ClpA/B, conserved site 1 CS348_15480 IPR001270 ClpA/B family CS348_15485 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CS348_15485 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CS348_15485 IPR003769 Adaptor protein ClpS, core CS348_15490 IPR011129 Cold shock domain CS348_15490 IPR012156 Cold shock, CspA CS348_15490 IPR019844 Cold-shock (CSD) domain CS348_15490 IPR002059 Cold-shock protein, DNA-binding CS348_15490 IPR012751 CspD, cold shock CS348_15490 IPR012340 Nucleic acid-binding, OB-fold CS348_15495 IPR017871 ABC transporter, conserved site CS348_15495 IPR003838 ABC transporter permease protein domain CS348_15495 IPR025857 MacB-like periplasmic core domain CS348_15495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15495 IPR003439 ABC transporter-like CS348_15495 IPR003593 AAA+ ATPase domain CS348_15495 IPR017911 ABC transporter, macrolide export, ATP-binding domain CS348_15500 IPR006143 RND efflux pump, membrane fusion protein CS348_15500 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CS348_15500 IPR030190 Macrolide export protein MacA CS348_15505 IPR007488 Protein of unknown function DUF535 CS348_15510 IPR034139 OLD protein-like, TOPRIM domain CS348_15510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15510 IPR006171 TOPRIM domain CS348_15510 IPR022602 Protein of unknown function DUF2813 CS348_15520 IPR005642 Lysine exporter LysO CS348_15525 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase CS348_15525 IPR011254 Prismane-like superfamily CS348_15525 IPR016099 Prismane-like, alpha/beta-sandwich CS348_15525 IPR010048 Hydroxylamine reductase CS348_15525 IPR016100 Prismane, alpha-bundle CS348_15530 IPR001433 Oxidoreductase FAD/NAD(P)-binding CS348_15530 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CS348_15530 IPR012675 Beta-grasp domain superfamily CS348_15530 IPR036010 2Fe-2S ferredoxin-like superfamily CS348_15530 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CS348_15530 IPR017927 FAD-binding domain, ferredoxin reductase-type CS348_15530 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CS348_15530 IPR000951 Phthalate dioxygenase reductase CS348_15530 IPR017938 Riboflavin synthase-like beta-barrel CS348_15535 IPR000399 TPP-binding enzyme, conserved site CS348_15535 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CS348_15535 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CS348_15535 IPR029061 Thiamin diphosphate-binding fold CS348_15535 IPR012000 Thiamine pyrophosphate enzyme, central domain CS348_15535 IPR029035 DHS-like NAD/FAD-binding domain superfamily CS348_15540 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CS348_15540 IPR015424 Pyridoxal phosphate-dependent transferase CS348_15540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_15540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_15540 IPR023603 Threonine aldolase CS348_15545 IPR016040 NAD(P)-binding domain CS348_15545 IPR036291 NAD(P)-binding domain superfamily CS348_15545 IPR021295 Protein of unknown function DUF2867 CS348_15550 IPR001509 NAD-dependent epimerase/dehydratase CS348_15550 IPR036291 NAD(P)-binding domain superfamily CS348_15555 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CS348_15555 IPR036365 PGBD-like superfamily CS348_15555 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CS348_15555 IPR036366 PGBD superfamily CS348_15560 IPR002765 Uncharacterised protein family UPF0145 CS348_15560 IPR035439 UPF0145 domain superfamily CS348_15565 IPR010391 DNA damage-inducible protein DinI-like CS348_15565 IPR036687 DinI-like superfamily CS348_15570 IPR036302 Pyosin/cloacin translocation domain superfamily CS348_15570 IPR024575 Cloacin colicin family CS348_15570 IPR016128 Pyosin/cloacin translocation domain CS348_15570 IPR037178 Colicin D, C-terminal domain superfamily CS348_15570 IPR024440 Colicin D C-terminal CS348_15570 IPR038233 Colicin D/E5 nuclease domain superfamily CS348_15585 IPR002514 Transposase IS3/IS911family CS348_15585 IPR009057 Homeobox-like domain superfamily CS348_15600 IPR018755 Bacteriophage Mu-like, Gp48 CS348_15605 IPR006949 Baseplate protein J-like CS348_15645 IPR007067 Tail sheath protein CS348_15645 IPR035089 Tail sheath protein, subtilisin-like domain CS348_15645 IPR020287 Tail sheath protein, C-terminal domain CS348_15690 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_15690 IPR005021 Terminase large subunit, Lambdalikevirus-type CS348_15690 IPR036390 Winged helix DNA-binding domain superfamily CS348_15715 IPR019659 Protein of unknown function DUF2514 CS348_15720 IPR023346 Lysozyme-like domain superfamily CS348_15720 IPR000726 Glycoside hydrolase, family 19, catalytic CS348_15735 IPR003222 Antitermination protein CS348_15735 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CS348_15765 IPR036286 LexA/Signal peptidase-like superfamily CS348_15765 IPR039418 LexA-like CS348_15765 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_15765 IPR001387 Cro/C1-type helix-turn-helix domain CS348_15765 IPR015927 Peptidase S24/S26A/S26B/S26C CS348_15815 IPR001001 DNA polymerase III, beta sliding clamp CS348_15815 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CS348_15815 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CS348_15815 IPR022637 DNA polymerase III, beta sliding clamp, central CS348_15850 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_15850 IPR002104 Integrase, catalytic domain CS348_15850 IPR010998 Integrase/recombinase, N-terminal CS348_15850 IPR022000 Min27-like integrase, DNA-binding domain CS348_15850 IPR013762 Integrase-like, catalytic domain superfamily CS348_15855 IPR024289 Domain of unknown function DUF3828 CS348_15860 IPR017871 ABC transporter, conserved site CS348_15860 IPR003593 AAA+ ATPase domain CS348_15860 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CS348_15860 IPR003439 ABC transporter-like CS348_15860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15865 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CS348_15865 IPR018313 Solute-binding protein family 3, conserved site CS348_15865 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CS348_15865 IPR001320 Ionotropic glutamate receptor CS348_15870 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CS348_15870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_15870 IPR035906 MetI-like superfamily CS348_15875 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_15875 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CS348_15875 IPR035906 MetI-like superfamily CS348_15880 IPR001320 Ionotropic glutamate receptor CS348_15880 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CS348_15880 IPR018313 Solute-binding protein family 3, conserved site CS348_15880 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CS348_15900 IPR004703 Phosphotransferase system, sugar-specific permease component CS348_15905 IPR030390 RNA methyltransferase TrmA, active site CS348_15905 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC CS348_15905 IPR030391 RNA methyltransferase TrmA, conserved site CS348_15905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_15905 IPR010280 (Uracil-5)-methyltransferase family CS348_15910 IPR019703 Protein of unknown function DUF2593 CS348_15915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_15915 IPR035906 MetI-like superfamily CS348_15920 IPR035906 MetI-like superfamily CS348_15920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_15925 IPR013611 Transport-associated OB, type 2 CS348_15925 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_15925 IPR008995 Molybdate/tungstate binding, C-terminal CS348_15925 IPR017871 ABC transporter, conserved site CS348_15925 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CS348_15925 IPR003593 AAA+ ATPase domain CS348_15925 IPR003439 ABC transporter-like CS348_15930 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CS348_15930 IPR006059 Bacterial extracellular solute-binding protein CS348_15935 IPR019660 Putative sensory transduction regulator YbjN CS348_15940 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK CS348_15940 IPR041107 RimK, PreATP-grasp domain CS348_15940 IPR013815 ATP-grasp fold, subdomain 1 CS348_15940 IPR013651 ATP-grasp fold, RimK-type CS348_15940 IPR011761 ATP-grasp fold CS348_15940 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX CS348_15945 IPR016446 Flavin oxidoreductase Frp family CS348_15945 IPR029479 Nitroreductase CS348_15945 IPR000415 Nitroreductase-like CS348_15950 IPR010815 Protein of unknown function DUF1418 CS348_15955 IPR002109 Glutaredoxin CS348_15955 IPR036249 Thioredoxin-like superfamily CS348_15955 IPR011902 Glutaredoxin, GrxA CS348_15955 IPR011767 Glutaredoxin active site CS348_15955 IPR014025 Glutaredoxin subgroup CS348_15960 IPR020368 Uncharacterised protein family YbjM CS348_15965 IPR006037 Regulator of K+ conductance, C-terminal CS348_15965 IPR023017 Transport protein YbjL, putative CS348_15965 IPR006512 YidE/YbjL duplication CS348_15965 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CS348_15975 IPR001647 DNA-binding HTH domain, TetR-type CS348_15975 IPR009057 Homeobox-like domain superfamily CS348_15975 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_15980 IPR011701 Major facilitator superfamily CS348_15980 IPR020846 Major facilitator superfamily domain CS348_15980 IPR036259 MFS transporter superfamily CS348_15985 IPR006379 HAD-superfamily hydrolase, subfamily IIB CS348_15985 IPR023214 HAD superfamily CS348_15985 IPR036412 HAD-like superfamily CS348_15985 IPR000150 Cof family CS348_15990 IPR005829 Sugar transporter, conserved site CS348_15990 IPR011701 Major facilitator superfamily CS348_15990 IPR020846 Major facilitator superfamily domain CS348_15990 IPR036259 MFS transporter superfamily CS348_15995 IPR033879 Undecaprenyl-diphosphatase CS348_15995 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CS348_15995 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CS348_16000 IPR001034 DeoR-type HTH domain CS348_16000 IPR037171 NagB/RpiA transferase-like CS348_16000 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_16000 IPR014036 DeoR C-terminal sensor domain CS348_16005 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CS348_16005 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CS348_16005 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CS348_16005 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CS348_16005 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CS348_16005 IPR012338 Beta-lactamase/transpeptidase-like CS348_16010 IPR036282 Glutathione S-transferase, C-terminal domain superfamily CS348_16010 IPR004045 Glutathione S-transferase, N-terminal CS348_16010 IPR004046 Glutathione S-transferase, C-terminal CS348_16010 IPR036249 Thioredoxin-like superfamily CS348_16010 IPR010987 Glutathione S-transferase, C-terminal-like CS348_16015 IPR011042 Six-bladed beta-propeller, TolB-like CS348_16015 IPR012938 Glucose/Sorbosone dehydrogenase CS348_16015 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CS348_16020 IPR011042 Six-bladed beta-propeller, TolB-like CS348_16020 IPR012938 Glucose/Sorbosone dehydrogenase CS348_16020 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CS348_16025 IPR003474 Gluconate transporter CS348_16030 IPR005119 LysR, substrate-binding CS348_16030 IPR000847 Transcription regulator HTH, LysR CS348_16030 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_16030 IPR036390 Winged helix DNA-binding domain superfamily CS348_16035 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase CS348_16035 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_16035 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_16040 IPR006089 Acyl-CoA dehydrogenase, conserved site CS348_16040 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CS348_16040 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CS348_16040 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CS348_16040 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CS348_16040 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CS348_16040 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CS348_16045 IPR029069 HotDog domain superfamily CS348_16055 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CS348_16055 IPR012255 Electron transfer flavoprotein, beta subunit CS348_16055 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CS348_16055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_16055 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CS348_16060 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_16060 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CS348_16060 IPR011206 Citrate lyase beta subunit-like CS348_16060 IPR040442 Pyruvate kinase-like domain superfamily CS348_16070 IPR020359 Biofilm regulator BssR CS348_16075 IPR006638 Elp3/MiaB/NifB CS348_16075 IPR005839 Methylthiotransferase CS348_16075 IPR007197 Radical SAM CS348_16075 IPR013848 Methylthiotransferase, N-terminal CS348_16075 IPR038135 Methylthiotransferase, N-terminal domain superfamily CS348_16075 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CS348_16075 IPR041582 RimO, TRAM domain CS348_16075 IPR023404 Radical SAM, alpha/beta horseshoe CS348_16075 IPR002792 TRAM domain CS348_16075 IPR020612 Methylthiotransferase, conserved site CS348_16080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_16080 IPR035906 MetI-like superfamily CS348_16080 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CS348_16085 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_16085 IPR035906 MetI-like superfamily CS348_16090 IPR000914 Solute-binding protein family 5 domain CS348_16090 IPR039424 Solute-binding protein family 5 CS348_16090 IPR030678 Peptide/nickel binding protein, MppA-type CS348_16095 IPR003593 AAA+ ATPase domain CS348_16095 IPR003439 ABC transporter-like CS348_16095 IPR017871 ABC transporter, conserved site CS348_16095 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CS348_16095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16100 IPR000246 Peptidase T2, asparaginase 2 CS348_16100 IPR029055 Nucleophile aminohydrolases, N-terminal CS348_16105 IPR005110 MoeA, N-terminal and linker domain CS348_16105 IPR036688 MoeA, C-terminal, domain IV superfamily CS348_16105 IPR036135 MoeA, N-terminal and linker domain superfamily CS348_16105 IPR036425 MoaB/Mog-like domain superfamily CS348_16105 IPR005111 MoeA, C-terminal, domain IV CS348_16105 IPR038987 Molybdopterin biosynthesis protein MoeA-like CS348_16105 IPR008284 Molybdenum cofactor biosynthesis, conserved site CS348_16105 IPR001453 MoaB/Mog domain CS348_16110 IPR035985 Ubiquitin-activating enzyme CS348_16110 IPR012730 Molybdopterin synthase sulfurylase MoeB CS348_16110 IPR000594 THIF-type NAD/FAD binding fold CS348_16115 IPR007197 Radical SAM CS348_16115 IPR013785 Aldolase-type TIM barrel CS348_16115 IPR001989 Radical-activating enzyme, conserved site CS348_16115 IPR034465 Pyruvate formate-lyase activase CS348_16115 IPR012839 Organic radical enzyme activase CS348_16115 IPR034457 Organic radical-activating enzymes CS348_16125 IPR036412 HAD-like superfamily CS348_16125 IPR006379 HAD-superfamily hydrolase, subfamily IIB CS348_16125 IPR023214 HAD superfamily CS348_16125 IPR000150 Cof family CS348_16130 IPR010856 Protein of unknown function DUF1479 CS348_16130 IPR027443 Isopenicillin N synthase-like CS348_16135 IPR032781 ABC-transporter extension domain CS348_16135 IPR003439 ABC transporter-like CS348_16135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16135 IPR003593 AAA+ ATPase domain CS348_16140 IPR005490 L,D-transpeptidase catalytic domain CS348_16140 IPR041597 L,D-transpeptidase C-terminal domain CS348_16140 IPR038063 L,D-transpeptidase catalytic domain-like CS348_16145 IPR004680 Citrate transporter-like domain CS348_16150 IPR036390 Winged helix DNA-binding domain superfamily CS348_16150 IPR001367 Iron dependent repressor, metal binding and dimerisation domain CS348_16150 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily CS348_16150 IPR022687 DTXR-type HTH domain CS348_16150 IPR022689 Iron dependent repressor CS348_16150 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_16160 IPR017850 Alkaline-phosphatase-like, core domain superfamily CS348_16160 IPR040423 Phosphoethanolamine transferase CS348_16160 IPR000917 Sulfatase, N-terminal CS348_16165 IPR027385 Outer membrane protein beta-barrel domain CS348_16165 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CS348_16165 IPR000758 Virulence-related outer membrane protein CS348_16170 IPR000620 EamA domain CS348_16175 IPR009078 Ferritin-like superfamily CS348_16175 IPR012347 Ferritin-like CS348_16175 IPR023188 DNA-binding protein Dps, conserved site CS348_16175 IPR002177 DNA-binding protein Dps CS348_16175 IPR023067 DNA protection during starvation protein, gammaproteobacteria CS348_16175 IPR008331 Ferritin/DPS protein domain CS348_16180 IPR018313 Solute-binding protein family 3, conserved site CS348_16180 IPR001320 Ionotropic glutamate receptor CS348_16180 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CS348_16185 IPR035906 MetI-like superfamily CS348_16185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_16185 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CS348_16190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16190 IPR017871 ABC transporter, conserved site CS348_16190 IPR003439 ABC transporter-like CS348_16190 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CS348_16190 IPR003593 AAA+ ATPase domain CS348_16195 IPR006685 Mechanosensitive ion channel MscS CS348_16195 IPR011066 Mechanosensitive ion channel MscS, C-terminal CS348_16195 IPR023408 Mechanosensitive ion channel MscS domain superfamily CS348_16195 IPR010920 LSM domain superfamily CS348_16195 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CS348_16200 IPR016909 Ribosomal RNA large subunit methyltransferase F CS348_16200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_16200 IPR010286 METTL16/RlmF family CS348_16205 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CS348_16205 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CS348_16205 IPR000962 Zinc finger, DksA/TraR C4-type CS348_16210 IPR025543 Dodecin-like CS348_16210 IPR036275 YdgH-like superfamily CS348_16210 IPR010854 Domain of unknown function DUF1471 CS348_16215 IPR017459 Glycosyl transferase family 3, N-terminal domain CS348_16215 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CS348_16215 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CS348_16220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16220 IPR039000 ATP-dependent DNA helicase DinG CS348_16220 IPR006555 ATP-dependent helicase, C-terminal CS348_16220 IPR001650 Helicase, C-terminal CS348_16220 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CS348_16220 IPR006554 Helicase-like, DEXD box c2 type CS348_16220 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_16220 IPR010614 DEAD2 CS348_16225 IPR014014 RNA helicase, DEAD-box type, Q motif CS348_16225 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CS348_16225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16225 IPR011545 DEAD/DEAH box helicase domain CS348_16225 IPR001650 Helicase, C-terminal CS348_16225 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_16225 IPR028622 ATP-dependent RNA helicase RhlE CS348_16230 IPR001647 DNA-binding HTH domain, TetR-type CS348_16230 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CS348_16230 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_16230 IPR009057 Homeobox-like domain superfamily CS348_16230 IPR015292 Transcription regulator YbiH, C-terminal CS348_16235 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG CS348_16235 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CS348_16240 IPR003439 ABC transporter-like CS348_16240 IPR003593 AAA+ ATPase domain CS348_16240 IPR017871 ABC transporter, conserved site CS348_16240 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16245 IPR000412 ABC-2 transporter CS348_16250 IPR000412 ABC-2 transporter CS348_16255 IPR021303 Uncharacterised protein family, inner membrane, YbhQ CS348_16260 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CS348_16260 IPR005135 Endonuclease/exonuclease/phosphatase CS348_16265 IPR001736 Phospholipase D/Transphosphatidylase CS348_16265 IPR030872 Cardiolipin synthase B CS348_16265 IPR025202 Phospholipase D-like domain CS348_16270 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CS348_16295 IPR006214 Bax inhibitor 1-related CS348_16300 IPR003448 Molybdopterin biosynthesis MoaE CS348_16300 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CS348_16305 IPR012675 Beta-grasp domain superfamily CS348_16305 IPR003749 Sulfur carrier ThiS/MoaD-like CS348_16305 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CS348_16310 IPR023045 Molybdenum cofactor biosynthesis C CS348_16310 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CS348_16310 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CS348_16315 IPR001453 MoaB/Mog domain CS348_16315 IPR012245 Molybdenum cofactor biosynthesis protein MoaB CS348_16315 IPR008284 Molybdenum cofactor biosynthesis, conserved site CS348_16315 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria CS348_16315 IPR036425 MoaB/Mog-like domain superfamily CS348_16320 IPR013785 Aldolase-type TIM barrel CS348_16320 IPR010505 Molybdenum cofactor synthesis C-terminal CS348_16320 IPR007197 Radical SAM CS348_16320 IPR013483 Molybdenum cofactor biosynthesis protein A CS348_16320 IPR006638 Elp3/MiaB/NifB CS348_16320 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CS348_16325 IPR010119 Gluconeogenesis factor CS348_16325 IPR038136 Gluconeogenesis factor superfamily CS348_16325 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CS348_16330 IPR001611 Leucine-rich repeat CS348_16330 IPR029487 Novel E3 ligase domain CS348_16330 IPR032674 LRR-containing bacterial E3 ligase, N-terminal CS348_16330 IPR032675 Leucine-rich repeat domain superfamily CS348_16330 IPR003591 Leucine-rich repeat, typical subtype CS348_16340 IPR006935 Helicase/UvrB, N-terminal CS348_16340 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_16340 IPR001650 Helicase, C-terminal CS348_16340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16340 IPR024759 UvrB, YAD/RRR-motif-containing domain CS348_16340 IPR041471 UvrB, interaction domain CS348_16340 IPR004807 UvrABC system, subunit B CS348_16340 IPR036876 UVR domain superfamily CS348_16340 IPR001943 UVR domain CS348_16350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16350 IPR004472 Dethiobiotin synthase BioD CS348_16355 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CS348_16355 IPR013216 Methyltransferase type 11 CS348_16355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_16360 IPR004839 Aminotransferase, class I/classII CS348_16360 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CS348_16360 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CS348_16360 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria CS348_16360 IPR015424 Pyridoxal phosphate-dependent transferase CS348_16360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_16360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_16365 IPR006638 Elp3/MiaB/NifB CS348_16365 IPR024177 Biotin synthase CS348_16365 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CS348_16365 IPR010722 Biotin and thiamin synthesis-associated domain CS348_16365 IPR013785 Aldolase-type TIM barrel CS348_16365 IPR007197 Radical SAM CS348_16370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_16370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_16370 IPR015424 Pyridoxal phosphate-dependent transferase CS348_16370 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CS348_16370 IPR005814 Aminotransferase class-III CS348_16375 IPR008914 Phosphatidylethanolamine-binding protein CS348_16375 IPR036610 PEBP-like superfamily CS348_16375 IPR005247 YbhB/YbcL CS348_16380 IPR008948 L-Aspartase-like CS348_16380 IPR022313 Phenylalanine/histidine ammonia-lyases, active site CS348_16380 IPR001106 Aromatic amino acid lyase CS348_16380 IPR024083 Fumarase/histidase, N-terminal CS348_16380 IPR005921 Histidine ammonia-lyase CS348_16385 IPR038364 Urocanase, central domain superfamily CS348_16385 IPR023636 Urocanase conserved site CS348_16385 IPR035400 Urocanase, N-terminal domain CS348_16385 IPR023637 Urocanase CS348_16385 IPR036190 Urocanase superfamily CS348_16385 IPR035401 Urocanase, C-terminal domain CS348_16385 IPR035085 Urocanase, Rossmann-like domain CS348_16390 IPR010248 Histidine utilization repressor CS348_16390 IPR000524 Transcription regulator HTH, GntR CS348_16390 IPR011663 UbiC transcription regulator-associated CS348_16390 IPR036390 Winged helix DNA-binding domain superfamily CS348_16390 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CS348_16390 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_16395 IPR023696 Ureohydrolase domain superfamily CS348_16395 IPR006035 Ureohydrolase CS348_16395 IPR005923 Formiminoglutamase CS348_16400 IPR006680 Amidohydrolase-related CS348_16400 IPR005920 Imidazolonepropionase CS348_16400 IPR011059 Metal-dependent hydrolase, composite domain superfamily CS348_16400 IPR032466 Metal-dependent hydrolase CS348_16405 IPR000070 Pectinesterase, catalytic CS348_16405 IPR011050 Pectin lyase fold/virulence factor CS348_16405 IPR012334 Pectin lyase fold CS348_16405 IPR033131 Pectinesterase, Asp active site CS348_16410 IPR022528 6-phosphogluconolactonase, YbhE-type CS348_16410 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CS348_16410 IPR011045 Nitrous oxide reductase, N-terminal CS348_16410 IPR019405 Lactonase, 7-bladed beta propeller CS348_16415 IPR023214 HAD superfamily CS348_16415 IPR036412 HAD-like superfamily CS348_16415 IPR000150 Cof family CS348_16415 IPR006379 HAD-superfamily hydrolase, subfamily IIB CS348_16420 IPR008995 Molybdate/tungstate binding, C-terminal CS348_16420 IPR011868 Molybdate ABC transporter, ATP-binding protein CS348_16420 IPR004606 Molybdenum-pterin binding CS348_16420 IPR003593 AAA+ ATPase domain CS348_16420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16420 IPR015852 ABC transporter, molybdenum import, ModC CS348_16420 IPR005116 Transport-associated OB, type 1 CS348_16420 IPR003439 ABC transporter-like CS348_16420 IPR017871 ABC transporter, conserved site CS348_16425 IPR011867 Molybdate ABC transporter, permease protein CS348_16425 IPR035906 MetI-like superfamily CS348_16425 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_16430 IPR005950 Molybdate ABC transporter, substrate-binding protein CS348_16435 IPR019702 Multidrug efflux pump accessory protein AcrZ CS348_16440 IPR036390 Winged helix DNA-binding domain superfamily CS348_16440 IPR008995 Molybdate/tungstate binding, C-terminal CS348_16440 IPR016462 Molybdate-dependent transcriptional regulator ModE CS348_16440 IPR003725 Molybdenum-binding protein ModE, N-terminal CS348_16440 IPR004606 Molybdenum-pterin binding CS348_16440 IPR005116 Transport-associated OB, type 1 CS348_16440 IPR000847 Transcription regulator HTH, LysR CS348_16440 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_16450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16450 IPR003439 ABC transporter-like CS348_16450 IPR003593 AAA+ ATPase domain CS348_16460 IPR036291 NAD(P)-binding domain superfamily CS348_16460 IPR005886 UDP-glucose 4-epimerase CS348_16460 IPR016040 NAD(P)-binding domain CS348_16465 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site CS348_16465 IPR001937 Galactose-1-phosphate uridyl transferase, class I CS348_16465 IPR036265 HIT-like superfamily CS348_16465 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal CS348_16465 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal CS348_16470 IPR006204 GHMP kinase N-terminal domain CS348_16470 IPR006206 Mevalonate/galactokinase CS348_16470 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_16470 IPR036554 GHMP kinase, C-terminal domain superfamily CS348_16470 IPR013750 GHMP kinase, C-terminal domain CS348_16470 IPR022963 Galactokinase, bacterial CS348_16470 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_16470 IPR000705 Galactokinase CS348_16470 IPR006203 GHMP kinase, ATP-binding, conserved site CS348_16470 IPR019741 Galactokinase, conserved site CS348_16470 IPR019539 Galactokinase galactose-binding domain CS348_16475 IPR013458 Aldose 1-epimerase, bacterial CS348_16475 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CS348_16475 IPR018052 Aldose 1-epimerase, conserved site CS348_16475 IPR011013 Galactose mutarotase-like domain superfamily CS348_16475 IPR014718 Glycoside hydrolase-type carbohydrate-binding CS348_16475 IPR015443 Aldose 1-epimerase CS348_16485 IPR029033 Histidine phosphatase superfamily CS348_16485 IPR013078 Histidine phosphatase superfamily, clade-1 CS348_16485 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CS348_16485 IPR005952 Phosphoglycerate mutase 1 CS348_16490 IPR003439 ABC transporter-like CS348_16490 IPR003593 AAA+ ATPase domain CS348_16490 IPR017871 ABC transporter, conserved site CS348_16490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16495 IPR037294 ABC transporter, BtuC-like CS348_16495 IPR000522 ABC transporter, permease protein, BtuC-like CS348_16500 IPR006219 DHAP synthase, class 1 CS348_16500 IPR013785 Aldolase-type TIM barrel CS348_16500 IPR006218 DAHP synthetase I/KDSA CS348_16505 IPR020363 Uncharacterised protein family YbgS CS348_16510 IPR002524 Cation efflux protein CS348_16510 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CS348_16510 IPR027469 Cation efflux transmembrane domain superfamily CS348_16510 IPR023500 Zinc transporter ZitB CS348_16515 IPR006419 Nicotinamide mononucleotide transporter PnuC CS348_16520 IPR036094 Quinolinate synthetase A superfamily CS348_16520 IPR023513 Quinolinate synthase A, type 1 CS348_16520 IPR003473 Quinolinate synthetase A CS348_16565 IPR032519 YbgF, trimerisation domain CS348_16565 IPR034706 Cell division coordinator CpoB CS348_16565 IPR014162 Cell division coordinator CpoB, C-terminal CS348_16565 IPR013026 Tetratricopeptide repeat-containing domain CS348_16565 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_16565 IPR019734 Tetratricopeptide repeat CS348_16570 IPR006664 Outer membrane protein, bacterial CS348_16570 IPR006665 OmpA-like domain CS348_16570 IPR006690 Outer membrane protein, OmpA-like, conserved site CS348_16570 IPR036737 OmpA-like domain superfamily CS348_16570 IPR039001 Peptidoglycan-associated lipoprotein CS348_16570 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal CS348_16575 IPR011042 Six-bladed beta-propeller, TolB-like CS348_16575 IPR036752 TolB, N-terminal domain superfamily CS348_16575 IPR011659 WD40-like Beta Propeller CS348_16575 IPR007195 TolB, N-terminal CS348_16575 IPR014167 Tol-Pal system protein TolB CS348_16580 IPR014161 Tol-Pal system, TolA CS348_16585 IPR014168 Tol-Pal system protein TolR CS348_16585 IPR003400 Biopolymer transport protein ExbD/TolR CS348_16590 IPR002898 MotA/TolQ/ExbB proton channel CS348_16590 IPR014163 Tol-Pal system, TolQ CS348_16595 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CS348_16595 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CS348_16595 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CS348_16595 IPR006683 Thioesterase domain CS348_16595 IPR029069 HotDog domain superfamily CS348_16600 IPR011846 Cyd operon protein YbgE CS348_16605 IPR011724 Cyd operon protein YbgT CS348_16605 IPR012994 Membrane bound YbgT-like CS348_16610 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CS348_16615 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CS348_16620 IPR036291 NAD(P)-binding domain superfamily CS348_16620 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CS348_16620 IPR005810 Succinyl-CoA ligase, alpha subunit CS348_16620 IPR016102 Succinyl-CoA synthetase-like CS348_16620 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CS348_16620 IPR003781 CoA-binding CS348_16620 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CS348_16625 IPR013815 ATP-grasp fold, subdomain 1 CS348_16625 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CS348_16625 IPR016102 Succinyl-CoA synthetase-like CS348_16625 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CS348_16625 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CS348_16625 IPR005809 Succinate--CoA synthetase, beta subunit CS348_16625 IPR011761 ATP-grasp fold CS348_16630 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CS348_16630 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CS348_16630 IPR000089 Biotin/lipoyl attachment CS348_16630 IPR036625 E3-binding domain superfamily CS348_16630 IPR006255 Dihydrolipoamide succinyltransferase CS348_16630 IPR011053 Single hybrid motif CS348_16630 IPR004167 Peripheral subunit-binding domain CS348_16630 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CS348_16635 IPR029061 Thiamin diphosphate-binding fold CS348_16635 IPR005475 Transketolase-like, pyrimidine-binding domain CS348_16635 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CS348_16635 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CS348_16635 IPR001017 Dehydrogenase, E1 component CS348_16635 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain CS348_16635 IPR011603 2-oxoglutarate dehydrogenase E1 component CS348_16640 IPR036010 2Fe-2S ferredoxin-like superfamily CS348_16640 IPR009051 Alpha-helical ferredoxin CS348_16640 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_16640 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_16640 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CS348_16640 IPR012675 Beta-grasp domain superfamily CS348_16640 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CS348_16640 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CS348_16645 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CS348_16645 IPR011281 Succinate dehydrogenase, flavoprotein subunit CS348_16645 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CS348_16645 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CS348_16645 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CS348_16645 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_16645 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CS348_16645 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CS348_16650 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CS348_16650 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor CS348_16650 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CS348_16655 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CS348_16655 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit CS348_16655 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site CS348_16655 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CS348_16670 IPR016143 Citrate synthase-like, small alpha subdomain CS348_16670 IPR036969 Citrate synthase superfamily CS348_16670 IPR010953 Citrate synthase, type I CS348_16670 IPR016142 Citrate synthase-like, large alpha subdomain CS348_16670 IPR019810 Citrate synthase active site CS348_16670 IPR002020 Citrate synthase CS348_16670 IPR024176 Citrate synthase, bacterial-type CS348_16675 IPR017516 AbrB duplication CS348_16675 IPR007820 AbrB family CS348_16680 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CS348_16680 IPR010663 Zinc finger, FPG/IleRS-type CS348_16680 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CS348_16680 IPR023713 Endonuclease VIII CS348_16680 IPR010979 Ribosomal protein S13-like, H2TH CS348_16680 IPR035937 MutM-like, N-terminal CS348_16680 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CS348_16680 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CS348_16685 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CS348_16685 IPR005501 LamB/YcsF/PxpA-like CS348_16690 IPR029000 Cyclophilin-like domain superfamily CS348_16690 IPR003778 Carboxyltransferase domain, subdomain A and B CS348_16695 IPR003833 Carboxyltransferase domain, subdomain C and D CS348_16695 IPR010016 KipI family CS348_16695 IPR029000 Cyclophilin-like domain superfamily CS348_16700 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CS348_16700 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CS348_16710 IPR000109 Proton-dependent oligopeptide transporter family CS348_16710 IPR036259 MFS transporter superfamily CS348_16710 IPR023777 Amino acid/peptide transporter family, dipeptide permease D CS348_16710 IPR020846 Major facilitator superfamily domain CS348_16710 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CS348_16710 IPR005279 Dipeptide/tripeptide permease CS348_16715 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily CS348_16715 IPR002081 Cryptochrome/DNA photolyase class 1 CS348_16715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_16715 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CS348_16715 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily CS348_16715 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain CS348_16715 IPR006050 DNA photolyase, N-terminal CS348_16720 IPR019663 Uncharacterised protein YbfA CS348_16725 IPR011726 K+ transporting P-type ATPase, F subunit CS348_16730 IPR004623 Potassium-transporting ATPase A chain CS348_16735 IPR018303 P-type ATPase, phosphorylation site CS348_16735 IPR006391 P-type ATPase, B chain, subfamily IA CS348_16735 IPR008250 P-type ATPase, A domain superfamily CS348_16735 IPR001757 P-type ATPase CS348_16735 IPR036412 HAD-like superfamily CS348_16735 IPR023299 P-type ATPase, cytoplasmic domain N CS348_16735 IPR023298 P-type ATPase, transmembrane domain superfamily CS348_16740 IPR003820 Potassium-transporting ATPase C chain CS348_16745 IPR029016 GAF-like domain superfamily CS348_16745 IPR003594 Histidine kinase/HSP90-like ATPase CS348_16745 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_16745 IPR005467 Histidine kinase domain CS348_16745 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_16745 IPR038318 KdpD, transmembrane domain superfamily CS348_16745 IPR025201 Sensor protein KdpD, transmembrane domain CS348_16745 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_16745 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CS348_16745 IPR003018 GAF domain CS348_16745 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_16750 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_16750 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_16750 IPR039420 Transcriptional regulatory protein WalR-like CS348_16750 IPR011006 CheY-like superfamily CS348_16750 IPR001789 Signal transduction response regulator, receiver domain CS348_16755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_16755 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CS348_16755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_16755 IPR011193 Ornithine/lysine/arginine decarboxylase CS348_16755 IPR000310 Orn/Lys/Arg decarboxylase, major domain CS348_16755 IPR027568 Ornithine decarboxylase SpeF CS348_16755 IPR027464 Ornithine decarboxylase, N-terminal CS348_16755 IPR011006 CheY-like superfamily CS348_16755 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CS348_16755 IPR015424 Pyridoxal phosphate-dependent transferase CS348_16755 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CS348_16760 IPR004754 Amino acid antiporter CS348_16760 IPR002293 Amino acid/polyamine transporter I CS348_16760 IPR027566 Putrescine transporter PotE CS348_16770 IPR005852 Phosphoglucomutase, alpha-D-glucose specific CS348_16770 IPR016066 Alpha-D-phosphohexomutase, conserved site CS348_16770 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CS348_16770 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CS348_16770 IPR005843 Alpha-D-phosphohexomutase, C-terminal CS348_16770 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CS348_16770 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CS348_16770 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CS348_16775 IPR005621 Negative modulator of initiation of replication SeqA CS348_16775 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal CS348_16775 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily CS348_16775 IPR010985 Ribbon-helix-helix CS348_16775 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain CS348_16775 IPR013321 Arc-type ribbon-helix-helix CS348_16780 IPR029058 Alpha/Beta hydrolase fold CS348_16780 IPR000073 Alpha/beta hydrolase fold-1 CS348_16785 IPR010985 Ribbon-helix-helix CS348_16785 IPR002145 Ribbon-helix-helix protein, CopG CS348_16790 IPR029039 Flavoprotein-like superfamily CS348_16790 IPR008254 Flavodoxin/nitric oxide synthase CS348_16790 IPR001226 Flavodoxin, conserved site CS348_16790 IPR010086 Flavodoxin, long chain CS348_16795 IPR002481 Ferric-uptake regulator CS348_16795 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_16795 IPR036390 Winged helix DNA-binding domain superfamily CS348_16800 IPR000847 Transcription regulator HTH, LysR CS348_16800 IPR036390 Winged helix DNA-binding domain superfamily CS348_16800 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_16800 IPR005119 LysR, substrate-binding CS348_16805 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CS348_16805 IPR036280 Multiheme cytochrome superfamily CS348_16805 IPR010960 Flavocytochrome c CS348_16805 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CS348_16805 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_16805 IPR012286 Tetrahaem cytochrome domain CS348_16805 IPR011031 Multihaem cytochrome CS348_16810 IPR036197 NarG-like superfamily CS348_16810 IPR012830 Citrate utilization protein B CS348_16815 IPR011701 Major facilitator superfamily CS348_16815 IPR020846 Major facilitator superfamily domain CS348_16815 IPR036259 MFS transporter superfamily CS348_16815 IPR004736 MFS transporter, metabolite:H symporter CS348_16815 IPR005829 Sugar transporter, conserved site CS348_16820 IPR025727 YbfN-like lipoprotein CS348_16825 IPR023614 Porin domain superfamily CS348_16825 IPR005318 Outer membrane porin, bacterial CS348_16830 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CS348_16830 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CS348_16830 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily CS348_16830 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain CS348_16830 IPR004514 Glutamine-tRNA synthetase CS348_16830 IPR022861 Glutamine-tRNA ligase, bacterial CS348_16830 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CS348_16830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_16830 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CS348_16830 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CS348_16835 IPR036878 Glucose permease domain IIB CS348_16835 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CS348_16835 IPR011055 Duplicated hybrid motif CS348_16835 IPR013013 Phosphotransferase system, EIIC component, type 1 CS348_16835 IPR001996 Phosphotransferase system, IIB component, type 1 CS348_16835 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component CS348_16835 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CS348_16835 IPR003352 Phosphotransferase system, EIIC CS348_16840 IPR037171 NagB/RpiA transferase-like CS348_16840 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CS348_16840 IPR004547 Glucosamine-6-phosphate isomerase CS348_16840 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CS348_16845 IPR006680 Amidohydrolase-related CS348_16845 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CS348_16845 IPR011059 Metal-dependent hydrolase, composite domain superfamily CS348_16845 IPR032466 Metal-dependent hydrolase CS348_16850 IPR000835 MarR-type HTH domain CS348_16850 IPR000600 ROK family CS348_16850 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_16850 IPR036390 Winged helix DNA-binding domain superfamily CS348_16855 IPR023214 HAD superfamily CS348_16855 IPR006357 HAD-superfamily hydrolase, subfamily IIA CS348_16855 IPR036412 HAD-like superfamily CS348_16860 IPR029055 Nucleophile aminohydrolases, N-terminal CS348_16860 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_16860 IPR006426 Asparagine synthase, glutamine-hydrolyzing CS348_16860 IPR033738 Asparagine synthase, N-terminal domain CS348_16860 IPR001962 Asparagine synthase CS348_16860 IPR017932 Glutamine amidotransferase type 2 domain CS348_16900 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site CS348_16900 IPR002938 FAD-binding domain CS348_16900 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 CS348_16900 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_16905 IPR006638 Elp3/MiaB/NifB CS348_16905 IPR038135 Methylthiotransferase, N-terminal domain superfamily CS348_16905 IPR005839 Methylthiotransferase CS348_16905 IPR013848 Methylthiotransferase, N-terminal CS348_16905 IPR002792 TRAM domain CS348_16905 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CS348_16905 IPR023404 Radical SAM, alpha/beta horseshoe CS348_16905 IPR007197 Radical SAM CS348_16905 IPR020612 Methylthiotransferase, conserved site CS348_16910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16910 IPR003714 PhoH-like protein CS348_16915 IPR020549 Endoribonuclease YbeY, conserved site CS348_16915 IPR023091 Metalloprotease catalytic domain superfamily, predicted CS348_16915 IPR002036 Endoribonuclease YbeY CS348_16920 IPR000644 CBS domain CS348_16920 IPR036318 FAD-binding, type PCMH-like superfamily CS348_16920 IPR016169 FAD-binding, type PCMH, subdomain 2 CS348_16920 IPR005170 Transporter-associated domain CS348_16925 IPR036526 Carbon-nitrogen hydrolase superfamily CS348_16925 IPR004563 Apolipoprotein N-acyltransferase CS348_16925 IPR003010 Carbon-nitrogen hydrolase CS348_16935 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CS348_16940 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CS348_16940 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ CS348_16940 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_16940 IPR035906 MetI-like superfamily CS348_16945 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM CS348_16945 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CS348_16945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_16945 IPR035906 MetI-like superfamily CS348_16950 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CS348_16950 IPR003593 AAA+ ATPase domain CS348_16950 IPR003439 ABC transporter-like CS348_16950 IPR017871 ABC transporter, conserved site CS348_16950 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16955 IPR036452 Ribonucleoside hydrolase-like CS348_16955 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CS348_16955 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA CS348_16955 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CS348_16955 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site CS348_16960 IPR009912 Zinc-ribbon containing domain CS348_16965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16965 IPR013767 PAS fold CS348_16965 IPR000014 PAS domain CS348_16965 IPR025944 Sigma-54 interaction domain, conserved site CS348_16965 IPR003593 AAA+ ATPase domain CS348_16965 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CS348_16965 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CS348_16965 IPR036291 NAD(P)-binding domain superfamily CS348_16965 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_16965 IPR002197 DNA binding HTH domain, Fis-type CS348_16965 IPR035965 PAS domain superfamily CS348_16965 IPR009057 Homeobox-like domain superfamily CS348_16970 IPR004684 2-keto-3-deoxygluconate permease CS348_16975 IPR007392 D-galactarate/Altronate dehydratase, C-terminal CS348_16985 IPR002300 Aminoacyl-tRNA synthetase, class Ia CS348_16985 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CS348_16985 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CS348_16985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_16985 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CS348_16985 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CS348_16985 IPR002302 Leucine-tRNA ligase CS348_16985 IPR025709 Leucyl-tRNA synthetase, editing domain CS348_16990 IPR007485 LPS-assembly lipoprotein LptE CS348_16995 IPR010372 DNA polymerase III delta, N-terminal CS348_16995 IPR032780 DNA polymerase III subunit delta, C-terminal CS348_16995 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CS348_16995 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_16995 IPR005790 DNA polymerase III, delta subunit CS348_17000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_17000 IPR004821 Cytidyltransferase-like domain CS348_17000 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CS348_17005 IPR004839 Aminotransferase, class I/classII CS348_17005 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CS348_17005 IPR015424 Pyridoxal phosphate-dependent transferase CS348_17005 IPR005860 L-threonine-O-3-phosphate decarboxylase CS348_17005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_17005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_17010 IPR017578 Alpha-ribazole phosphatase, CobC CS348_17010 IPR013078 Histidine phosphatase superfamily, clade-1 CS348_17010 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CS348_17010 IPR029033 Histidine phosphatase superfamily CS348_17015 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CS348_17020 IPR029028 Alpha/beta knot methyltransferases CS348_17020 IPR003742 RNA methyltransferase RlmH CS348_17020 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CS348_17025 IPR001460 Penicillin-binding protein, transpeptidase CS348_17025 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CS348_17025 IPR017790 Penicillin-binding protein 2 CS348_17025 IPR005311 Penicillin-binding protein, dimerisation domain CS348_17025 IPR012338 Beta-lactamase/transpeptidase-like CS348_17030 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CS348_17030 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CS348_17030 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CS348_17035 IPR012997 Rare lipoprotein A CS348_17035 IPR036680 Sporulation-like domain superfamily CS348_17035 IPR034718 Endolytic peptidoglycan transglycosylase RlpA CS348_17035 IPR007730 Sporulation-like domain CS348_17035 IPR009009 RlpA-like protein, double-psi beta-barrel domain CS348_17035 IPR036908 RlpA-like domain superfamily CS348_17040 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CS348_17040 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CS348_17040 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CS348_17040 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CS348_17040 IPR012338 Beta-lactamase/transpeptidase-like CS348_17040 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CS348_17045 IPR027471 YbeD-like domain superfamily CS348_17045 IPR007454 Uncharacterised protein family UPF0250 CS348_17050 IPR000544 Octanoyltransferase CS348_17050 IPR020605 Octanoyltransferase, conserved site CS348_17050 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CS348_17055 IPR000847 Transcription regulator HTH, LysR CS348_17055 IPR005119 LysR, substrate-binding CS348_17055 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_17055 IPR036390 Winged helix DNA-binding domain superfamily CS348_17060 IPR013785 Aldolase-type TIM barrel CS348_17060 IPR007197 Radical SAM CS348_17060 IPR003698 Lipoyl synthase CS348_17060 IPR031691 Lipoyl synthase, N-terminal CS348_17060 IPR006638 Elp3/MiaB/NifB CS348_17065 IPR003369 Sec-independent protein translocase protein TatA/B/E CS348_17065 IPR024905 Sec-independent protein translocase protein TatE CS348_17065 IPR006312 Sec-independent protein translocase protein TatA/E CS348_17070 IPR001110 Uncharacterised protein family UPF0012, conserved site CS348_17070 IPR036526 Carbon-nitrogen hydrolase superfamily CS348_17070 IPR003010 Carbon-nitrogen hydrolase CS348_17075 IPR003691 Putative fluoride ion transporter CrcB CS348_17080 IPR012156 Cold shock, CspA CS348_17080 IPR011129 Cold shock domain CS348_17080 IPR012340 Nucleic acid-binding, OB-fold CS348_17080 IPR002059 Cold-shock protein, DNA-binding CS348_17080 IPR019844 Cold-shock (CSD) domain CS348_17085 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP CS348_17085 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CS348_17095 IPR018385 C4-dicarboxylate anaerobic carrier-like CS348_17095 IPR004669 C4-dicarboxylate anaerobic carrier CS348_17100 IPR001789 Signal transduction response regulator, receiver domain CS348_17100 IPR011006 CheY-like superfamily CS348_17100 IPR024187 Signal transduction response regulator, citrate/malate metabolism CS348_17100 IPR028141 Transcriptional regulator CS348_17105 IPR005467 Histidine kinase domain CS348_17105 IPR035965 PAS domain superfamily CS348_17105 IPR013767 PAS fold CS348_17105 IPR033463 Single cache domain 3 CS348_17105 IPR029151 Periplasmic sensor-like domain superfamily CS348_17105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_17105 IPR000014 PAS domain CS348_17105 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB CS348_17105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_17105 IPR039506 SpoOB, alpha-helical domain CS348_17105 IPR003594 Histidine kinase/HSP90-like ATPase CS348_17115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_17115 IPR004821 Cytidyltransferase-like domain CS348_17115 IPR013166 Citrate lyase ligase, C-terminal CS348_17115 IPR005216 Citrate lyase ligase CS348_17115 IPR000182 GNAT domain CS348_17115 IPR016181 Acyl-CoA N-acyltransferase CS348_17120 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CS348_17120 IPR006495 Citrate lyase acyl carrier protein CitD CS348_17125 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CS348_17125 IPR006475 Citrate lyase, beta subunit, bacteria CS348_17125 IPR011206 Citrate lyase beta subunit-like CS348_17125 IPR040442 Pyruvate kinase-like domain superfamily CS348_17125 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_17130 IPR006472 Citrate lyase, alpha subunit CS348_17130 IPR037171 NagB/RpiA transferase-like CS348_17135 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CS348_17140 IPR002736 Triphosphoribosyl-dephospho-CoA protein CS348_17140 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG CS348_17145 IPR001898 Solute carrier family 13 CS348_17145 IPR030676 Citrate carrier CitT-related CS348_17150 IPR036430 Ribonuclease T2-like superfamily CS348_17150 IPR018188 Ribonuclease T2, His active site 1 CS348_17150 IPR033130 Ribonuclease T2, His active site 2 CS348_17150 IPR001568 Ribonuclease T2-like CS348_17150 IPR039378 Ribonuclease T2, prokaryotic CS348_17160 IPR023459 Transcription elongation factor GreA/GreB family CS348_17160 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CS348_17160 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CS348_17160 IPR028625 Regulator of nucleoside diphosphate kinase CS348_17160 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CS348_17165 IPR036291 NAD(P)-binding domain superfamily CS348_17165 IPR011032 GroES-like superfamily CS348_17165 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CS348_17165 IPR027399 Alcohol dehydrogenase GroES-associated CS348_17165 IPR013154 Alcohol dehydrogenase, N-terminal CS348_17165 IPR013149 Alcohol dehydrogenase, C-terminal CS348_17170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_17170 IPR006015 Universal stress protein A family CS348_17170 IPR006016 UspA CS348_17180 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_17180 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_17180 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_17185 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_17185 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_17185 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_17185 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CS348_17185 IPR006656 Molybdopterin oxidoreductase CS348_17185 IPR006657 Molybdopterin dinucleotide-binding domain CS348_17185 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_17195 IPR012336 Thioredoxin-like fold CS348_17195 IPR036249 Thioredoxin-like superfamily CS348_17195 IPR023753 FAD/NAD(P)-binding domain CS348_17195 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CS348_17195 IPR002109 Glutaredoxin CS348_17195 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_17195 IPR012081 Alkyl hydroperoxide reductase subunit F CS348_17200 IPR036249 Thioredoxin-like superfamily CS348_17200 IPR013766 Thioredoxin domain CS348_17200 IPR019479 Peroxiredoxin, C-terminal CS348_17200 IPR024706 Peroxiredoxin, AhpC-type CS348_17200 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CS348_17200 IPR017559 Alkyl hydroperoxide reductase subunit C CS348_17205 IPR036249 Thioredoxin-like superfamily CS348_17205 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily CS348_17205 IPR033954 Disulphide bond isomerase, DsbC/G CS348_17205 IPR012336 Thioredoxin-like fold CS348_17215 IPR036390 Winged helix DNA-binding domain superfamily CS348_17215 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_17215 IPR000847 Transcription regulator HTH, LysR CS348_17215 IPR005119 LysR, substrate-binding CS348_17220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_17220 IPR002500 Phosphoadenosine phosphosulphate reductase CS348_17220 IPR021845 Protein of unknown function DUF3440 CS348_17225 IPR036086 ParB/Sulfiredoxin superfamily CS348_17225 IPR003115 ParB/Sulfiredoxin CS348_17230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_17230 IPR015424 Pyridoxal phosphate-dependent transferase CS348_17230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_17230 IPR004839 Aminotransferase, class I/classII CS348_17235 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CS348_17235 IPR016205 Glycerol dehydrogenase CS348_17235 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CS348_17240 IPR007423 Selenoprotein, putative CS348_17245 IPR003706 CstA, N-terminal domain CS348_17245 IPR025299 CstA, C-terminal domain CS348_17250 IPR006683 Thioesterase domain CS348_17250 IPR003736 Phenylacetic acid degradation-related domain CS348_17250 IPR026576 Proofreading thioesterase EntH CS348_17250 IPR029069 HotDog domain superfamily CS348_17255 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase CS348_17255 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_17255 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_17255 IPR036291 NAD(P)-binding domain superfamily CS348_17260 IPR016291 Isochorismatase CS348_17260 IPR009081 Phosphopantetheine binding ACP domain CS348_17260 IPR036736 ACP-like superfamily CS348_17260 IPR000868 Isochorismatase-like CS348_17260 IPR036380 Isochorismatase-like superfamily CS348_17265 IPR025110 AMP-binding enzyme, C-terminal domain CS348_17265 IPR020845 AMP-binding, conserved site CS348_17265 IPR000873 AMP-dependent synthetase/ligase CS348_17265 IPR042099 AMP-dependent synthetase-like superfamily CS348_17265 IPR011963 2,3-dihydroxybenzoate-AMP ligase CS348_17270 IPR015890 Chorismate-utilising enzyme, C-terminal CS348_17270 IPR004561 Isochorismate synthase CS348_17270 IPR005801 ADC synthase CS348_17275 IPR002491 ABC transporter periplasmic binding domain CS348_17280 IPR020846 Major facilitator superfamily domain CS348_17280 IPR023722 Enterobactin exporter, EntS CS348_17280 IPR010290 Transmembrane secretion effector CS348_17280 IPR036259 MFS transporter superfamily CS348_17285 IPR037294 ABC transporter, BtuC-like CS348_17285 IPR000522 ABC transporter, permease protein, BtuC-like CS348_17290 IPR037294 ABC transporter, BtuC-like CS348_17290 IPR000522 ABC transporter, permease protein, BtuC-like CS348_17295 IPR017871 ABC transporter, conserved site CS348_17295 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_17295 IPR003439 ABC transporter-like CS348_17295 IPR003593 AAA+ ATPase domain CS348_17300 IPR003856 Polysaccharide chain length determinant N-terminal domain CS348_17305 IPR010071 Amino acid adenylation domain CS348_17305 IPR001031 Thioesterase CS348_17305 IPR006162 Phosphopantetheine attachment site CS348_17305 IPR009081 Phosphopantetheine binding ACP domain CS348_17305 IPR020802 Polyketide synthase, thioesterase domain CS348_17305 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CS348_17305 IPR001242 Condensation domain CS348_17305 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CS348_17305 IPR000873 AMP-dependent synthetase/ligase CS348_17305 IPR020845 AMP-binding, conserved site CS348_17305 IPR025110 AMP-binding enzyme, C-terminal domain CS348_17305 IPR036736 ACP-like superfamily CS348_17305 IPR029058 Alpha/Beta hydrolase fold CS348_17305 IPR042099 AMP-dependent synthetase-like superfamily CS348_17310 IPR005153 MbtH-like domain CS348_17310 IPR038020 MbtH-like domain superfamily CS348_17310 IPR037407 MbtH-like protein CS348_17315 IPR000801 Putative esterase CS348_17315 IPR021764 Enterochelin esterase, N-terminal CS348_17315 IPR029058 Alpha/Beta hydrolase fold CS348_17315 IPR014756 Immunoglobulin E-set CS348_17315 IPR013783 Immunoglobulin-like fold CS348_17320 IPR010917 TonB-dependent receptor, conserved site CS348_17320 IPR039426 Vitamin B12 transporter BtuB-like CS348_17320 IPR012910 TonB-dependent receptor, plug domain CS348_17320 IPR037066 TonB-dependent receptor, plug domain superfamily CS348_17320 IPR000531 TonB-dependent receptor-like, beta-barrel CS348_17320 IPR010916 TonB box, conserved site CS348_17320 IPR010105 TonB-dependent siderophore receptor CS348_17320 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CS348_17325 IPR003542 Enterobactin synthetase-like, component D CS348_17325 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CS348_17325 IPR008278 4'-phosphopantetheinyl transferase domain CS348_17325 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain CS348_17330 IPR011793 Putative glutamate--cysteine ligase YbdK CS348_17330 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CS348_17330 IPR006336 Glutamate--cysteine ligase, GCS2 CS348_17335 IPR010590 Protein of unknown function DUF1158 CS348_17340 IPR020449 Transcription regulator HTH, AraC- type CS348_17340 IPR018060 DNA binding HTH domain, AraC-type CS348_17340 IPR009057 Homeobox-like domain superfamily CS348_17340 IPR018062 HTH domain AraC-type, conserved site CS348_17345 IPR032551 HTH-type transcriptional repressor, C-terminal CS348_17345 IPR001647 DNA-binding HTH domain, TetR-type CS348_17345 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CS348_17345 IPR009057 Homeobox-like domain superfamily CS348_17345 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_17350 IPR007351 Uncharacterised protein YjbR CS348_17350 IPR038056 YjbR-like superfamily CS348_17355 IPR033878 Nitroreductase NfsB-like CS348_17355 IPR029479 Nitroreductase CS348_17355 IPR000415 Nitroreductase-like CS348_17360 IPR036514 SGNH hydrolase superfamily CS348_17360 IPR005546 Autotransporter beta-domain CS348_17360 IPR036709 Autotransporter beta-domain superfamily CS348_17360 IPR006315 Outer membrane autotransporter barrel CS348_17360 IPR001087 GDSL lipase/esterase CS348_17360 IPR017186 Lipase, autotransporter EstA CS348_17360 IPR008265 Lipase, GDSL, active site CS348_17370 IPR004841 Amino acid permease/ SLC12A domain CS348_17370 IPR004840 Amino acid permease, conserved site CS348_17380 IPR016865 Inner membrane protein RclC CS348_17380 IPR007339 Inner membrane protein RclC-like CS348_17385 IPR025543 Dodecin-like CS348_17385 IPR036275 YdgH-like superfamily CS348_17385 IPR010854 Domain of unknown function DUF1471 CS348_17390 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CS348_17390 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CS348_17390 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_17390 IPR023753 FAD/NAD(P)-binding domain CS348_17390 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CS348_17390 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CS348_17395 IPR018060 DNA binding HTH domain, AraC-type CS348_17395 IPR032783 AraC-type transcription regulator, ligand-binding domain CS348_17395 IPR020449 Transcription regulator HTH, AraC- type CS348_17395 IPR009057 Homeobox-like domain superfamily CS348_17395 IPR011051 RmlC-like cupin domain superfamily CS348_17400 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA CS348_17400 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CS348_17400 IPR001036 Acriflavin resistance protein CS348_17405 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_17405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_17405 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_17405 IPR005467 Histidine kinase domain CS348_17405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_17405 IPR006290 Heavy metal sensor kinase CS348_17405 IPR003660 HAMP domain CS348_17405 IPR003594 Histidine kinase/HSP90-like ATPase CS348_17430 IPR024575 Cloacin colicin family CS348_17430 IPR038233 Colicin D/E5 nuclease domain superfamily CS348_17430 IPR024440 Colicin D C-terminal CS348_17430 IPR037178 Colicin D, C-terminal domain superfamily CS348_17430 IPR016128 Pyosin/cloacin translocation domain CS348_17430 IPR036302 Pyosin/cloacin translocation domain superfamily CS348_17445 IPR002514 Transposase IS3/IS911family CS348_17445 IPR009057 Homeobox-like domain superfamily CS348_17450 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CS348_17455 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal CS348_17455 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal CS348_17455 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 CS348_17455 IPR037053 Phage tail collar domain superfamily CS348_17455 IPR011083 Phage tail collar domain CS348_17455 IPR008969 Carboxypeptidase-like, regulatory domain superfamily CS348_17455 IPR037053 Phage tail collar domain superfamily CS348_17455 IPR011083 Phage tail collar domain CS348_17455 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 CS348_17455 IPR008969 Carboxypeptidase-like, regulatory domain superfamily CS348_17525 IPR029045 ClpP/crotonase-like domain superfamily CS348_17525 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CS348_17525 IPR018215 ClpP, Ser active site CS348_17525 IPR001907 ATP-dependent Clp protease proteolytic subunit CS348_17570 IPR023346 Lysozyme-like domain superfamily CS348_17570 IPR002196 Glycoside hydrolase, family 24 CS348_17570 IPR034690 Endolysin T4 type CS348_17585 IPR003222 Antitermination protein CS348_17585 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CS348_17635 IPR019475 DNA primase, DnaB-helicase binding domain CS348_17635 IPR030846 DNA primase DnaG, bacteria CS348_17635 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CS348_17635 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CS348_17635 IPR034151 Bacterial DnaG primase, TOPRIM domain CS348_17635 IPR006171 TOPRIM domain CS348_17635 IPR013264 DNA primase, catalytic core, N-terminal CS348_17635 IPR002694 Zinc finger, CHC2-type CS348_17635 IPR036977 DNA Primase, CHC2-type zinc finger CS348_17635 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CS348_17635 IPR006295 DNA primase, DnaG CS348_17665 IPR002104 Integrase, catalytic domain CS348_17665 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_17665 IPR038488 Integrase, DNA-binding domain superfamily CS348_17665 IPR013762 Integrase-like, catalytic domain superfamily CS348_17665 IPR004107 Integrase, SAM-like, N-terminal CS348_17665 IPR025166 Integrase, DNA-binding domain CS348_17665 IPR010998 Integrase/recombinase, N-terminal CS348_17680 IPR016032 Signal transduction response regulator, C-terminal effector CS348_17680 IPR000792 Transcription regulator LuxR, C-terminal CS348_17680 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_17695 IPR011006 CheY-like superfamily CS348_17695 IPR001789 Signal transduction response regulator, receiver domain CS348_17695 IPR016032 Signal transduction response regulator, C-terminal effector CS348_17695 IPR000792 Transcription regulator LuxR, C-terminal CS348_17700 IPR036937 Fimbrial-type adhesion domain superfamily CS348_17700 IPR000259 Fimbrial-type adhesion domain CS348_17700 IPR008966 Adhesion domain superfamily CS348_17705 IPR000259 Fimbrial-type adhesion domain CS348_17705 IPR008966 Adhesion domain superfamily CS348_17705 IPR036937 Fimbrial-type adhesion domain superfamily CS348_17710 IPR025885 PapC, N-terminal domain CS348_17710 IPR000015 Outer membrane usher protein CS348_17710 IPR018030 Fimbrial membrane usher, conserved site CS348_17710 IPR042186 Outer membrane usher protein FimD, plug domain CS348_17710 IPR037224 PapC, N-terminal domain superfamily CS348_17710 IPR025949 PapC-like, C-terminal domain CS348_17715 IPR018046 Pili assembly chaperone, conserved site CS348_17715 IPR008962 PapD-like superfamily CS348_17715 IPR016147 Pili assembly chaperone, N-terminal CS348_17715 IPR016148 Pili assembly chaperone, C-terminal CS348_17715 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_17715 IPR013783 Immunoglobulin-like fold CS348_17715 IPR001829 Pili assembly chaperone, bacterial CS348_17720 IPR008966 Adhesion domain superfamily CS348_17720 IPR036937 Fimbrial-type adhesion domain superfamily CS348_17725 IPR036937 Fimbrial-type adhesion domain superfamily CS348_17725 IPR000259 Fimbrial-type adhesion domain CS348_17725 IPR008966 Adhesion domain superfamily CS348_17735 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CS348_17735 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CS348_17735 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CS348_17735 IPR036291 NAD(P)-binding domain superfamily CS348_17735 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CS348_17740 IPR036986 RNA-binding S4 domain superfamily CS348_17740 IPR002942 RNA-binding S4 domain CS348_17760 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CS348_17760 IPR015803 Cysteine-tRNA ligase CS348_17760 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CS348_17760 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CS348_17760 IPR032678 tRNA synthetases class I, catalytic domain CS348_17760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_17765 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CS348_17765 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CS348_17765 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CS348_17765 IPR029000 Cyclophilin-like domain superfamily CS348_17770 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type CS348_17770 IPR010138 UDP-2,3-diacylglucosamine hydrolase CS348_17780 IPR033747 Class I PurE CS348_17780 IPR035893 PurE domain superfamily CS348_17780 IPR000031 PurE domain CS348_17780 IPR024694 PurE, prokaryotic type CS348_17785 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CS348_17785 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CS348_17785 IPR016185 Pre-ATP-grasp domain superfamily CS348_17785 IPR011761 ATP-grasp fold CS348_17785 IPR013815 ATP-grasp fold, subdomain 1 CS348_17785 IPR011054 Rudiment single hybrid motif CS348_17785 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain CS348_17790 IPR036873 Rhodanese-like domain superfamily CS348_17790 IPR001763 Rhodanese-like domain CS348_17790 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase CS348_17795 IPR035906 MetI-like superfamily CS348_17795 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_17800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_17800 IPR017871 ABC transporter, conserved site CS348_17800 IPR003439 ABC transporter-like CS348_17800 IPR003593 AAA+ ATPase domain CS348_17800 IPR026253 Methionine import ATP-binding protein MetN CS348_17800 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CS348_17800 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CS348_17800 IPR018449 NIL domain CS348_17805 IPR004872 Lipoprotein NlpA family CS348_17815 IPR038766 Membrane component of ABC transporter, predicted CS348_17820 IPR003439 ABC transporter-like CS348_17820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_17820 IPR003593 AAA+ ATPase domain CS348_17820 IPR017871 ABC transporter, conserved site CS348_17825 IPR036514 SGNH hydrolase superfamily CS348_17825 IPR013830 SGNH hydrolase-type esterase domain CS348_17825 IPR008265 Lipase, GDSL, active site CS348_17830 IPR036291 NAD(P)-binding domain superfamily CS348_17830 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_17830 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_17835 IPR013766 Thioredoxin domain CS348_17835 IPR036249 Thioredoxin-like superfamily CS348_17835 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_17840 IPR005226 UPF0014 family CS348_17845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_17845 IPR003439 ABC transporter-like CS348_17845 IPR003593 AAA+ ATPase domain CS348_17845 IPR017871 ABC transporter, conserved site CS348_17850 IPR018080 Band 7/stomatin-like, conserved site CS348_17850 IPR036013 Band 7/SPFH domain superfamily CS348_17850 IPR001107 Band 7 domain CS348_17850 IPR001972 Stomatin family CS348_17850 IPR032435 Band 7, C-terminal extension CS348_17855 IPR002810 NfeD-like, C-terminal domain CS348_17860 IPR000551 MerR-type HTH domain CS348_17860 IPR009061 Putative DNA-binding domain superfamily CS348_17860 IPR011789 Cu(I)-responsive transcriptional regulator CS348_17865 IPR017969 Heavy-metal-associated, conserved site CS348_17865 IPR023214 HAD superfamily CS348_17865 IPR036412 HAD-like superfamily CS348_17865 IPR027256 P-type ATPase, subfamily IB CS348_17865 IPR036163 Heavy metal-associated domain superfamily CS348_17865 IPR023299 P-type ATPase, cytoplasmic domain N CS348_17865 IPR001757 P-type ATPase CS348_17865 IPR018303 P-type ATPase, phosphorylation site CS348_17865 IPR023298 P-type ATPase, transmembrane domain superfamily CS348_17865 IPR006121 Heavy metal-associated domain, HMA CS348_17865 IPR008250 P-type ATPase, A domain superfamily CS348_17875 IPR002816 TraB family CS348_17880 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CS348_17880 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CS348_17880 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CS348_17885 IPR006146 5'-Nucleotidase, conserved site CS348_17885 IPR008334 5'-Nucleotidase, C-terminal CS348_17885 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CS348_17885 IPR006179 5'-Nucleotidase/apyrase CS348_17885 IPR029052 Metallo-dependent phosphatase-like CS348_17885 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CS348_17890 IPR011701 Major facilitator superfamily CS348_17890 IPR036259 MFS transporter superfamily CS348_17890 IPR020846 Major facilitator superfamily domain CS348_17895 IPR006153 Cation/H+ exchanger CS348_17895 IPR004771 K+/H+ exchanger CS348_17895 IPR038770 Sodium/solute symporter superfamily CS348_17895 IPR003148 Regulator of K+ conductance, N-terminal CS348_17895 IPR036291 NAD(P)-binding domain superfamily CS348_17900 IPR011611 Carbohydrate kinase PfkB CS348_17900 IPR029056 Ribokinase-like CS348_17900 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_17905 IPR029058 Alpha/Beta hydrolase fold CS348_17905 IPR033140 Lipase, GDXG, putative serine active site CS348_17905 IPR023508 Acetyl esterase CS348_17905 IPR013094 Alpha/beta hydrolase fold-3 CS348_17910 IPR001015 Ferrochelatase CS348_17910 IPR019772 Ferrochelatase, active site CS348_17910 IPR033644 Ferrochelatase, C-terminal CS348_17910 IPR033659 Ferrochelatase, N-terminal CS348_17915 IPR006259 Adenylate kinase subfamily CS348_17915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_17915 IPR000850 Adenylate kinase/UMP-CMP kinase CS348_17915 IPR033690 Adenylate kinase, conserved site CS348_17915 IPR007862 Adenylate kinase, active site lid domain CS348_17925 IPR020575 Heat shock protein Hsp90, N-terminal CS348_17925 IPR001404 Heat shock protein Hsp90 family CS348_17925 IPR003594 Histidine kinase/HSP90-like ATPase CS348_17925 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_17925 IPR019805 Heat shock protein Hsp90, conserved site CS348_17925 IPR037196 HSP90, C-terminal domain CS348_17925 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_17930 IPR015967 Recombination protein RecR, conserved site CS348_17930 IPR034137 RecR, TOPRIM domain CS348_17930 IPR023628 Recombination protein RecR, C4-type zinc finger CS348_17930 IPR023627 Recombination protein RecR CS348_17930 IPR000093 DNA recombination protein RecR CS348_17930 IPR006171 TOPRIM domain CS348_17935 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CS348_17935 IPR004401 Nucleoid-associated protein YbaB/EbfC family CS348_17940 IPR003593 AAA+ ATPase domain CS348_17940 IPR001270 ClpA/B family CS348_17940 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CS348_17940 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_17940 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily CS348_17940 IPR021029 DNA polymerase III, tau subunit, domain V CS348_17940 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV CS348_17940 IPR022754 DNA polymerase III, gamma subunit, domain III CS348_17940 IPR012763 DNA polymerase III, subunit gamma/ tau CS348_17945 IPR029057 Phosphoribosyltransferase-like CS348_17945 IPR000836 Phosphoribosyltransferase domain CS348_17945 IPR005764 Adenine phosphoribosyl transferase CS348_17955 IPR007401 Protein of unknown function DUF454 CS348_17960 IPR010890 Primosomal replication PriB/PriC CS348_17960 IPR038338 PriB/PriC superfamily CS348_17965 IPR019630 Protein of unknown function DUF2496, YbaM-related CS348_17975 IPR010920 LSM domain superfamily CS348_17975 IPR011066 Mechanosensitive ion channel MscS, C-terminal CS348_17975 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CS348_17975 IPR023408 Mechanosensitive ion channel MscS domain superfamily CS348_17975 IPR006686 Mechanosensitive ion channel MscS, conserved site CS348_17975 IPR024393 Mechanosensitive ion channel MscS, porin domain CS348_17975 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CS348_17975 IPR006685 Mechanosensitive ion channel MscS CS348_17975 IPR023298 P-type ATPase, transmembrane domain superfamily CS348_17980 IPR001647 DNA-binding HTH domain, TetR-type CS348_17980 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_17980 IPR009057 Homeobox-like domain superfamily CS348_17980 IPR013572 Transcription regulator MAATS, C-terminal CS348_17980 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CS348_17985 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CS348_17985 IPR006143 RND efflux pump, membrane fusion protein CS348_17990 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CS348_17990 IPR001036 Acriflavin resistance protein CS348_17990 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CS348_17995 IPR019693 Biofilm formation regulator YbaJ CS348_18000 IPR036666 HHA superfamily CS348_18000 IPR007985 Haemolysin expression modulating, HHA CS348_18005 IPR001451 Hexapeptide repeat CS348_18005 IPR011004 Trimeric LpxA-like superfamily CS348_18005 IPR024688 Maltose/galactoside acetyltransferase CS348_18005 IPR018357 Hexapeptide transferase, conserved site CS348_18010 IPR019713 Inner membrane protein YlaC CS348_18015 IPR035977 Ribosomal protein L36 superfamily CS348_18015 IPR000473 Ribosomal protein L36 CS348_18020 IPR002150 Ribosomal protein L31 CS348_18020 IPR027493 Ribosomal protein L31 type B CS348_18020 IPR042105 Ribosomal protein L31 superfamily CS348_18020 IPR034704 L28p-like CS348_18025 IPR001633 EAL domain CS348_18025 IPR035919 EAL domain superfamily CS348_18025 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CS348_18035 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CS348_18035 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CS348_18035 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_18040 IPR039366 YscW/ExsB CS348_18045 IPR003703 Acyl-CoA thioesterase CS348_18045 IPR029069 HotDog domain superfamily CS348_18050 IPR029020 Ammonium/urea transporter CS348_18050 IPR024041 Ammonium transporter AmtB-like domain CS348_18050 IPR018047 Ammonium transporter, conserved site CS348_18050 IPR001905 Ammonium transporter CS348_18055 IPR002332 Nitrogen regulatory protein P-II, urydylation site CS348_18055 IPR002187 Nitrogen regulatory protein PII CS348_18055 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CS348_18055 IPR017918 Nitrogen regulatory protein PII, conserved site CS348_18055 IPR011322 Nitrogen regulatory PII-like, alpha/beta CS348_18060 IPR003593 AAA+ ATPase domain CS348_18060 IPR017871 ABC transporter, conserved site CS348_18060 IPR011527 ABC transporter type 1, transmembrane domain CS348_18060 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_18060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_18060 IPR039421 Type I protein exporter CS348_18060 IPR003439 ABC transporter-like CS348_18065 IPR039421 Type I protein exporter CS348_18065 IPR003593 AAA+ ATPase domain CS348_18065 IPR011527 ABC transporter type 1, transmembrane domain CS348_18065 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_18065 IPR003439 ABC transporter-like CS348_18065 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_18065 IPR017871 ABC transporter, conserved site CS348_18070 IPR000485 AsnC-type HTH domain CS348_18070 IPR011008 Dimeric alpha-beta barrel CS348_18070 IPR011991 ArsR-like helix-turn-helix domain CS348_18070 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CS348_18070 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CS348_18070 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_18070 IPR036390 Winged helix DNA-binding domain superfamily CS348_18070 IPR019888 Transcription regulator AsnC-type CS348_18080 IPR000150 Cof family CS348_18080 IPR023938 HMP-PP phosphatase CS348_18080 IPR006379 HAD-superfamily hydrolase, subfamily IIB CS348_18080 IPR023214 HAD superfamily CS348_18080 IPR036412 HAD-like superfamily CS348_18085 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CS348_18085 IPR000914 Solute-binding protein family 5 domain CS348_18085 IPR039424 Solute-binding protein family 5 CS348_18090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_18090 IPR018317 Queuosine biosynthesis protein QueC CS348_18095 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CS348_18095 IPR029069 HotDog domain superfamily CS348_18100 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CS348_18100 IPR010994 RuvA domain 2-like CS348_18100 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CS348_18105 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CS348_18105 IPR027304 Trigger factor/SurA domain superfamily CS348_18105 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CS348_18110 IPR000119 Histone-like DNA-binding protein CS348_18110 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CS348_18110 IPR020816 Histone-like DNA-binding protein, conserved site CS348_18115 IPR003959 ATPase, AAA-type, core CS348_18115 IPR027543 Lon protease, bacterial CS348_18115 IPR003593 AAA+ ATPase domain CS348_18115 IPR004815 Lon protease, bacterial/eukaryotic-type CS348_18115 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_18115 IPR027065 Lon protease CS348_18115 IPR003111 Lon, substrate-binding domain CS348_18115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_18115 IPR008268 Peptidase S16, active site CS348_18115 IPR015947 PUA-like superfamily CS348_18115 IPR008269 Peptidase S16, Lon proteolytic domain CS348_18115 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_18120 IPR010603 Zinc finger, ClpX C4-type CS348_18120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_18120 IPR004487 Clp protease, ATP-binding subunit ClpX CS348_18120 IPR019489 Clp ATPase, C-terminal CS348_18120 IPR003959 ATPase, AAA-type, core CS348_18120 IPR003593 AAA+ ATPase domain CS348_18120 IPR038366 Zinc finger, ClpX C4-type superfamily CS348_18125 IPR018215 ClpP, Ser active site CS348_18125 IPR033135 ClpP, histidine active site CS348_18125 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CS348_18125 IPR001907 ATP-dependent Clp protease proteolytic subunit CS348_18125 IPR029045 ClpP/crotonase-like domain superfamily CS348_18130 IPR036611 Trigger factor ribosome-binding domain superfamily CS348_18130 IPR027304 Trigger factor/SurA domain superfamily CS348_18130 IPR008881 Trigger factor, ribosome-binding, bacterial CS348_18130 IPR037041 Trigger factor, C-terminal domain superfamily CS348_18130 IPR008880 Trigger factor, C-terminal CS348_18130 IPR005215 Trigger factor CS348_18130 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CS348_18140 IPR002634 BolA protein CS348_18140 IPR036065 BolA-like superfamily CS348_18150 IPR012640 Membrane lipoprotein, lipid attachment site CS348_18150 IPR005619 Uncharacterised protein family, YajG CS348_18155 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 CS348_18155 IPR011701 Major facilitator superfamily CS348_18155 IPR020846 Major facilitator superfamily domain CS348_18155 IPR036259 MFS transporter superfamily CS348_18160 IPR008972 Cupredoxin CS348_18160 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CS348_18160 IPR010514 COX aromatic rich motif CS348_18160 IPR006333 Cytochrome o ubiquinol oxidase subunit II CS348_18160 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain CS348_18160 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CS348_18160 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CS348_18165 IPR014207 Cytochrome o ubiquinol oxidase, subunit I CS348_18165 IPR023616 Cytochrome c oxidase-like, subunit I domain CS348_18165 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CS348_18165 IPR000883 Cytochrome c oxidase subunit I CS348_18165 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CS348_18170 IPR024791 Cytochrome c oxidase subunit III CS348_18170 IPR000298 Cytochrome c oxidase subunit III-like CS348_18170 IPR035973 Cytochrome c oxidase subunit III-like superfamily CS348_18170 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CS348_18170 IPR033946 Ubiquinol oxidase subunit III domain CS348_18170 IPR014206 Cytochrome o ubiquinol oxidase, subunit III CS348_18175 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CS348_18175 IPR014210 Cytochrome o ubiquinol oxidase subunit IV CS348_18180 IPR030470 UbiA prenyltransferase conserved site CS348_18180 IPR006369 Protohaem IX farnesyltransferase CS348_18180 IPR000537 UbiA prenyltransferase family CS348_18185 IPR036259 MFS transporter superfamily CS348_18185 IPR011701 Major facilitator superfamily CS348_18185 IPR020846 Major facilitator superfamily domain CS348_18190 IPR036183 YajQ-like superfamily CS348_18190 IPR035570 UPF0234, N-terminal CS348_18190 IPR035571 UPF0234-like, C-terminal CS348_18190 IPR007551 Protein of unknown function DUF520 CS348_18195 IPR036291 NAD(P)-binding domain superfamily CS348_18195 IPR003710 Ketopantoate reductase ApbA/PanE CS348_18195 IPR013752 Ketopantoate reductase, C-terminal domain CS348_18195 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_18195 IPR013332 Ketopantoate reductase, N-terminal domain CS348_18195 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_18200 IPR029062 Class I glutamine amidotransferase-like CS348_18200 IPR002818 DJ-1/PfpI CS348_18200 IPR006287 Protein/nucleic acid deglycase DJ-1 CS348_18205 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CS348_18205 IPR023214 HAD superfamily CS348_18205 IPR036412 HAD-like superfamily CS348_18205 IPR006323 Phosphonoacetaldehyde hydrolase CS348_18205 IPR006439 HAD hydrolase, subfamily IA CS348_18210 IPR012703 2-aminoethylphosphonate--pyruvate transaminase CS348_18210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_18210 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_18210 IPR000192 Aminotransferase class V domain CS348_18210 IPR015424 Pyridoxal phosphate-dependent transferase CS348_18210 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CS348_18215 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_18215 IPR000524 Transcription regulator HTH, GntR CS348_18215 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CS348_18215 IPR017722 Phosphonate utilization transcriptional regulator PhnR CS348_18215 IPR011663 UbiC transcription regulator-associated CS348_18215 IPR036390 Winged helix DNA-binding domain superfamily CS348_18220 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter CS348_18220 IPR006059 Bacterial extracellular solute-binding protein CS348_18225 IPR003439 ABC transporter-like CS348_18225 IPR017871 ABC transporter, conserved site CS348_18225 IPR003593 AAA+ ATPase domain CS348_18225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_18225 IPR008995 Molybdate/tungstate binding, C-terminal CS348_18225 IPR013611 Transport-associated OB, type 2 CS348_18225 IPR017662 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT CS348_18230 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_18230 IPR035906 MetI-like superfamily CS348_18230 IPR017636 2-aminoethylphosphonate ABC transporter system, permease protein phnU CS348_18235 IPR035906 MetI-like superfamily CS348_18235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_18235 IPR017661 2-aminoethylphosphonate ABC transport system, membrane component PhnV CS348_18240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_18240 IPR020536 Thil, AANH domain CS348_18240 IPR026340 Thiazole biosynthesis domain CS348_18240 IPR036873 Rhodanese-like domain superfamily CS348_18240 IPR003720 tRNA sulfurtransferase ThiI CS348_18240 IPR001763 Rhodanese-like domain CS348_18240 IPR004114 THUMP domain CS348_18245 IPR003761 Exonuclease VII, small subunit CS348_18245 IPR037004 Exonuclease VII, small subunit superfamily CS348_18250 IPR033749 Polyprenyl synthetase, conserved site CS348_18250 IPR000092 Polyprenyl synthetase CS348_18250 IPR008949 Isoprenoid synthase domain superfamily CS348_18255 IPR033248 Transketolase, C-terminal domain CS348_18255 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CS348_18255 IPR005475 Transketolase-like, pyrimidine-binding domain CS348_18255 IPR020826 Transketolase binding site CS348_18255 IPR029061 Thiamin diphosphate-binding fold CS348_18255 IPR005477 Deoxyxylulose-5-phosphate synthase CS348_18255 IPR005474 Transketolase, N-terminal CS348_18260 IPR020471 Aldo/keto reductase CS348_18260 IPR023210 NADP-dependent oxidoreductase domain CS348_18260 IPR036812 NADP-dependent oxidoreductase domain superfamily CS348_18265 IPR026037 Phosphatidylglycerophosphatase A CS348_18265 IPR036681 PgpA-like superfamily CS348_18265 IPR007686 YutG/PgpA domain CS348_18270 IPR036921 PurM-like, N-terminal domain superfamily CS348_18270 IPR016188 PurM-like, N-terminal domain CS348_18270 IPR010918 PurM-like, C-terminal domain CS348_18270 IPR006283 Thiamine-monophosphate kinase CS348_18270 IPR036676 PurM-like, C-terminal domain superfamily CS348_18275 IPR035926 NusB-like superfamily CS348_18275 IPR006027 NusB/RsmB/TIM44 CS348_18275 IPR011605 NusB antitermination factor CS348_18280 IPR036467 Lumazine/riboflavin synthase superfamily CS348_18280 IPR034964 Lumazine synthase CS348_18280 IPR002180 Lumazine/riboflavin synthase CS348_18285 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CS348_18285 IPR004794 Riboflavin biosynthesis protein RibD CS348_18285 IPR024072 Dihydrofolate reductase-like domain superfamily CS348_18285 IPR016193 Cytidine deaminase-like CS348_18285 IPR002125 Cytidine and deoxycytidylate deaminase domain CS348_18285 IPR016192 APOBEC/CMP deaminase, zinc-binding CS348_18285 IPR011549 Riboflavin-specific deaminase, C-terminal CS348_18290 IPR003796 Ribonucleotide reductase regulator NrdR-like CS348_18290 IPR005144 ATP-cone domain CS348_18295 IPR037125 Lipoprotein YajI-like superfamily CS348_18295 IPR021658 Domain of unknown function DUF3251 CS348_18300 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily CS348_18300 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like CS348_18300 IPR003055 Nucleoside-specific channel-forming protein Tsx CS348_18315 IPR002711 HNH endonuclease CS348_18315 IPR003615 HNH nuclease CS348_18320 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CS348_18320 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CS348_18320 IPR005665 Protein-export membrane protein SecF, bacterial CS348_18320 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CS348_18325 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CS348_18325 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CS348_18325 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CS348_18325 IPR005791 Protein translocase subunit SecD CS348_18325 IPR027398 SecD export protein N-terminal TM domain CS348_18330 IPR003849 Preprotein translocase YajC CS348_18335 IPR004803 tRNA-guanine transglycosylase CS348_18335 IPR036511 Queuine tRNA-ribosyltransferase-like CS348_18335 IPR002616 tRNA-guanine(15) transglycosylase-like CS348_18345 IPR042118 QueA, domain 1 CS348_18345 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CS348_18345 IPR042119 QueA, domain 2 CS348_18345 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CS348_18350 IPR007431 Acyl carrier protein phosphodiesterase CS348_18350 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria CS348_18355 IPR036249 Thioredoxin-like superfamily CS348_18355 IPR019479 Peroxiredoxin, C-terminal CS348_18355 IPR024706 Peroxiredoxin, AhpC-type CS348_18355 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CS348_18355 IPR013766 Thioredoxin domain CS348_18360 IPR014756 Immunoglobulin E-set CS348_18360 IPR013780 Glycosyl hydrolase, all-beta CS348_18360 IPR017069 Maltodextrin glucosidase CS348_18360 IPR017853 Glycoside hydrolase superfamily CS348_18360 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CS348_18360 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain CS348_18365 IPR004840 Amino acid permease, conserved site CS348_18365 IPR004841 Amino acid permease/ SLC12A domain CS348_18370 IPR004685 Branched-chain amino acid transport system II carrier protein CS348_18375 IPR013767 PAS fold CS348_18375 IPR000014 PAS domain CS348_18375 IPR035965 PAS domain superfamily CS348_18375 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_18375 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_18375 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_18375 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR CS348_18375 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_18375 IPR003594 Histidine kinase/HSP90-like ATPase CS348_18375 IPR021766 Phosphate regulon sensor protein PhoR CS348_18375 IPR005467 Histidine kinase domain CS348_18380 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_18380 IPR001789 Signal transduction response regulator, receiver domain CS348_18380 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CS348_18380 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_18380 IPR011006 CheY-like superfamily CS348_18380 IPR039420 Transcriptional regulatory protein WalR-like CS348_18385 IPR004593 Nuclease SbcCD subunit D CS348_18385 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain CS348_18385 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CS348_18385 IPR029052 Metallo-dependent phosphatase-like CS348_18385 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CS348_18390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_18390 IPR038729 Rad50/SbcC-type AAA domain CS348_18390 IPR004592 Nuclease SbcC, gammaproteobacteria type CS348_18395 IPR036259 MFS transporter superfamily CS348_18395 IPR020846 Major facilitator superfamily domain CS348_18395 IPR011701 Major facilitator superfamily CS348_18400 IPR000600 ROK family CS348_18405 IPR007476 Putative exonuclease, RdgC CS348_18410 IPR011051 RmlC-like cupin domain superfamily CS348_18410 IPR014710 RmlC-like jelly roll fold CS348_18410 IPR009664 Pyrimidine/purine nucleoside phosphorylase CS348_18415 IPR010843 Uncharacterised protein family AroM CS348_18420 IPR032303 YaiA protein CS348_18420 IPR038462 YaiA-like superfamily CS348_18425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_18425 IPR031322 Shikimate kinase/gluconokinase CS348_18425 IPR027544 Shikimate kinase 2 CS348_18425 IPR023000 Shikimate kinase, conserved site CS348_18425 IPR000623 Shikimate kinase/Threonine synthase-like 1 CS348_18430 IPR003791 Protein of unknown function UPF0178 CS348_18435 IPR000304 Pyrroline-5-carboxylate reductase CS348_18435 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CS348_18435 IPR036291 NAD(P)-binding domain superfamily CS348_18435 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_18435 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CS348_18440 IPR007894 MASE2 CS348_18440 IPR000160 GGDEF domain CS348_18440 IPR029787 Nucleotide cyclase CS348_18445 IPR011690 Phosphate-starvation-induced PsiF repeat CS348_18455 IPR019732 Sigma-S stabilisation anti-adaptor protein CS348_18460 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CS348_18460 IPR023692 Multidrug resistance protein MdtG CS348_18460 IPR036259 MFS transporter superfamily CS348_18460 IPR020846 Major facilitator superfamily domain CS348_18460 IPR011701 Major facilitator superfamily CS348_18470 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CS348_18470 IPR005905 D-alanine--D-alanine ligase CS348_18470 IPR011095 D-alanine--D-alanine ligase, C-terminal CS348_18470 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CS348_18470 IPR016185 Pre-ATP-grasp domain superfamily CS348_18470 IPR011761 ATP-grasp fold CS348_18470 IPR013815 ATP-grasp fold, subdomain 1 CS348_18475 IPR020490 Uncharacterised protein family YaiZ CS348_18480 IPR020513 Uncharacterised protein family, inner membrane YaiY CS348_18485 IPR011673 Protein of unknown function DUF1615 CS348_18490 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_18490 IPR009248 SbmA/BacA-like CS348_18500 IPR012338 Beta-lactamase/transpeptidase-like CS348_18500 IPR001466 Beta-lactamase-related CS348_18505 IPR000595 Cyclic nucleotide-binding domain CS348_18505 IPR034719 Inhibitor of hydrogen peroxide resistance CS348_18505 IPR018490 Cyclic nucleotide-binding-like CS348_18505 IPR041687 IprA, winged helix-turn-helix domain CS348_18510 IPR005546 Autotransporter beta-domain CS348_18510 IPR003991 Pertactin virulence factor family CS348_18510 IPR036709 Autotransporter beta-domain superfamily CS348_18510 IPR011050 Pectin lyase fold/virulence factor CS348_18510 IPR006315 Outer membrane autotransporter barrel CS348_18515 IPR001731 Delta-aminolevulinic acid dehydratase CS348_18515 IPR013785 Aldolase-type TIM barrel CS348_18515 IPR030656 Delta-aminolevulinic acid dehydratase, active site CS348_18520 IPR042099 AMP-dependent synthetase-like superfamily CS348_18520 IPR012694 Propionate--CoA ligase CS348_18520 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CS348_18520 IPR025110 AMP-binding enzyme, C-terminal domain CS348_18520 IPR020845 AMP-binding, conserved site CS348_18520 IPR000873 AMP-dependent synthetase/ligase CS348_18525 IPR012705 2-methylcitrate dehydratase PrpD CS348_18525 IPR036148 MmgE/PrpD superfamily CS348_18525 IPR042183 MmgE/PrpD superfamily, domain 1 CS348_18525 IPR042188 MmgE/PrpD superfamily, domain 2 CS348_18525 IPR005656 MmgE/PrpD CS348_18530 IPR016142 Citrate synthase-like, large alpha subdomain CS348_18530 IPR011278 2-methylcitrate synthase/citrate synthase type I CS348_18530 IPR036969 Citrate synthase superfamily CS348_18530 IPR024176 Citrate synthase, bacterial-type CS348_18530 IPR016143 Citrate synthase-like, small alpha subdomain CS348_18530 IPR002020 Citrate synthase CS348_18530 IPR019810 Citrate synthase active site CS348_18535 IPR040442 Pyruvate kinase-like domain superfamily CS348_18535 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_18535 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CS348_18535 IPR039556 ICL/PEPM domain CS348_18535 IPR012695 2-methylisocitrate lyase CS348_18540 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal CS348_18540 IPR009057 Homeobox-like domain superfamily CS348_18540 IPR002197 DNA binding HTH domain, Fis-type CS348_18540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_18540 IPR003593 AAA+ ATPase domain CS348_18540 IPR025944 Sigma-54 interaction domain, conserved site CS348_18540 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR CS348_18540 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CS348_18540 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_18545 IPR010854 Domain of unknown function DUF1471 CS348_18545 IPR036275 YdgH-like superfamily CS348_18545 IPR025543 Dodecin-like CS348_18550 IPR001123 Amino acid exporter protein, LeuE-type CS348_18550 IPR004778 Homoserine/Threonine efflux protein CS348_18555 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CS348_18555 IPR039423 TonB-dependent receptor-like CS348_18555 IPR037066 TonB-dependent receptor, plug domain superfamily CS348_18555 IPR012910 TonB-dependent receptor, plug domain CS348_18555 IPR010105 TonB-dependent siderophore receptor CS348_18555 IPR000531 TonB-dependent receptor-like, beta-barrel CS348_18570 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CS348_18575 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CS348_18585 IPR006935 Helicase/UvrB, N-terminal CS348_18585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_18585 IPR014883 VRR-NUC domain CS348_18590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_18590 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CS348_18590 IPR041405 Type III R-M EcoP15I, C-terminal CS348_18590 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_18590 IPR002941 DNA methylase N-4/N-6 CS348_18595 IPR011701 Major facilitator superfamily CS348_18595 IPR020846 Major facilitator superfamily domain CS348_18595 IPR036259 MFS transporter superfamily CS348_18605 IPR015358 Transcription regulator MerR, DNA binding CS348_18605 IPR000551 MerR-type HTH domain CS348_18605 IPR009061 Putative DNA-binding domain superfamily CS348_18605 IPR011789 Cu(I)-responsive transcriptional regulator CS348_18610 IPR006122 Heavy metal-associated domain, copper ion-binding CS348_18610 IPR006121 Heavy metal-associated domain, HMA CS348_18610 IPR036163 Heavy metal-associated domain superfamily CS348_18610 IPR027256 P-type ATPase, subfamily IB CS348_18610 IPR023214 HAD superfamily CS348_18610 IPR017969 Heavy-metal-associated, conserved site CS348_18610 IPR008250 P-type ATPase, A domain superfamily CS348_18610 IPR018303 P-type ATPase, phosphorylation site CS348_18610 IPR023298 P-type ATPase, transmembrane domain superfamily CS348_18610 IPR036412 HAD-like superfamily CS348_18610 IPR023299 P-type ATPase, cytoplasmic domain N CS348_18610 IPR001757 P-type ATPase CS348_18615 IPR022824 Multidrug resistance protein MdtA CS348_18615 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CS348_18615 IPR006143 RND efflux pump, membrane fusion protein CS348_18620 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CS348_18620 IPR001036 Acriflavin resistance protein CS348_18620 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CS348_18625 IPR003423 Outer membrane efflux protein CS348_18625 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CS348_18645 IPR000758 Virulence-related outer membrane protein CS348_18645 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CS348_18645 IPR027385 Outer membrane protein beta-barrel domain CS348_18660 IPR001633 EAL domain CS348_18660 IPR035919 EAL domain superfamily CS348_18660 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CS348_18690 IPR039458 FimA-like CS348_18690 IPR036937 Fimbrial-type adhesion domain superfamily CS348_18690 IPR008966 Adhesion domain superfamily CS348_18695 IPR016147 Pili assembly chaperone, N-terminal CS348_18695 IPR013783 Immunoglobulin-like fold CS348_18695 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_18695 IPR008962 PapD-like superfamily CS348_18695 IPR001829 Pili assembly chaperone, bacterial CS348_18695 IPR016148 Pili assembly chaperone, C-terminal CS348_18695 IPR018046 Pili assembly chaperone, conserved site CS348_18700 IPR018030 Fimbrial membrane usher, conserved site CS348_18700 IPR042186 Outer membrane usher protein FimD, plug domain CS348_18700 IPR025949 PapC-like, C-terminal domain CS348_18700 IPR025885 PapC, N-terminal domain CS348_18700 IPR000015 Outer membrane usher protein CS348_18700 IPR037224 PapC, N-terminal domain superfamily CS348_18710 IPR013783 Immunoglobulin-like fold CS348_18710 IPR016148 Pili assembly chaperone, C-terminal CS348_18710 IPR001829 Pili assembly chaperone, bacterial CS348_18710 IPR016147 Pili assembly chaperone, N-terminal CS348_18710 IPR008962 PapD-like superfamily CS348_18710 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_18710 IPR018046 Pili assembly chaperone, conserved site CS348_18725 IPR000965 GPR domain CS348_18725 IPR012134 Glutamate-5-semialdehyde dehydrogenase CS348_18725 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CS348_18725 IPR016161 Aldehyde/histidinol dehydrogenase CS348_18725 IPR015590 Aldehyde dehydrogenase domain CS348_18725 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_18725 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_18730 IPR001048 Aspartate/glutamate/uridylate kinase CS348_18730 IPR015947 PUA-like superfamily CS348_18730 IPR036974 PUA domain superfamily CS348_18730 IPR041739 Glutamate-5-kinase domain CS348_18730 IPR001057 Glutamate/acetylglutamate kinase CS348_18730 IPR011529 Glutamate 5-kinase CS348_18730 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CS348_18730 IPR002478 PUA domain CS348_18730 IPR019797 Glutamate 5-kinase, conserved site CS348_18730 IPR036393 Acetylglutamate kinase-like superfamily CS348_18735 IPR023614 Porin domain superfamily CS348_18735 IPR001897 Porin, gammaproteobacterial CS348_18735 IPR001702 Porin, Gram-negative type CS348_18735 IPR013793 Porin, Gram-negative type, conserved site CS348_18735 IPR033900 Porin domain, Gram-negative type CS348_18740 IPR038208 Sigma factor-binding protein Crl superfamily CS348_18740 IPR009986 Sigma factor-binding transcriptional regulator Crl CS348_18745 IPR010520 UPF0255 family CS348_18745 IPR029058 Alpha/Beta hydrolase fold CS348_18750 IPR029057 Phosphoribosyltransferase-like CS348_18750 IPR000836 Phosphoribosyltransferase domain CS348_18750 IPR023747 Xanthine-guanine phosphoribosyltransferase CS348_18755 IPR011650 Peptidase M20, dimerisation domain CS348_18755 IPR001160 Peptidase M20C, Xaa-His dipeptidase CS348_18755 IPR002933 Peptidase M20 CS348_18760 IPR000352 Peptide chain release factor class I CS348_18760 IPR017509 Putative peptide chain release factor H CS348_18765 IPR036025 tRNA-splicing ligase RtcB-like superfamily CS348_18770 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CS348_18770 IPR001126 UmuC domain CS348_18770 IPR024728 DNA polymerase type-Y, HhH motif CS348_18770 IPR022880 DNA polymerase IV CS348_18770 IPR017961 DNA polymerase, Y-family, little finger domain CS348_18775 IPR005490 L,D-transpeptidase catalytic domain CS348_18775 IPR038063 L,D-transpeptidase catalytic domain-like CS348_18780 IPR017932 Glutamine amidotransferase type 2 domain CS348_18780 IPR029055 Nucleophile aminohydrolases, N-terminal CS348_18780 IPR026869 Putative glutamine amidotransferase type 2 CS348_18785 IPR035461 GmhA/DiaA CS348_18785 IPR001347 Sugar isomerase (SIS) CS348_18785 IPR004515 Phosphoheptose isomerase CS348_18790 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CS348_18790 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CS348_18790 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CS348_18790 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type CS348_18790 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CS348_18790 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CS348_18790 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CS348_18795 IPR001110 Uncharacterised protein family UPF0012, conserved site CS348_18795 IPR036526 Carbon-nitrogen hydrolase superfamily CS348_18795 IPR003010 Carbon-nitrogen hydrolase CS348_18810 IPR027385 Outer membrane protein beta-barrel domain CS348_18810 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CS348_18830 IPR011008 Dimeric alpha-beta barrel CS348_18830 IPR019888 Transcription regulator AsnC-type CS348_18830 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CS348_18830 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CS348_18830 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_18830 IPR011991 ArsR-like helix-turn-helix domain CS348_18830 IPR000485 AsnC-type HTH domain CS348_18830 IPR036390 Winged helix DNA-binding domain superfamily CS348_18845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_18845 IPR001525 C-5 cytosine methyltransferase CS348_18845 IPR018117 DNA methylase, C-5 cytosine-specific, active site CS348_18870 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CS348_18890 IPR006949 Baseplate protein J-like CS348_18900 IPR013046 Phage baseplate assembly protein V/Gp45 CS348_18900 IPR014462 Phage-associated protein Gp45 CS348_18910 IPR009826 DNA circulation, N-terminal CS348_18935 IPR003959 ATPase, AAA-type, core CS348_18935 IPR028299 ClpA/B, conserved site 2 CS348_18935 IPR041546 ClpA/ClpB, AAA lid domain CS348_18935 IPR017729 Type VI secretion system, ATPase ClpV1 CS348_18935 IPR019489 Clp ATPase, C-terminal CS348_18935 IPR003593 AAA+ ATPase domain CS348_18935 IPR001270 ClpA/B family CS348_18935 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_18935 IPR004176 Clp, N-terminal CS348_18935 IPR036628 Clp, N-terminal domain superfamily CS348_18935 IPR018368 ClpA/B, conserved site 1 CS348_18975 IPR006309 DNA polymerase 3, epsilon subunit CS348_18975 IPR013520 Exonuclease, RNase T/DNA polymerase III CS348_18975 IPR036397 Ribonuclease H superfamily CS348_18975 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CS348_18975 IPR012337 Ribonuclease H-like superfamily CS348_18980 IPR002156 Ribonuclease H domain CS348_18980 IPR022892 Ribonuclease HI CS348_18980 IPR012337 Ribonuclease H-like superfamily CS348_18980 IPR036397 Ribonuclease H superfamily CS348_18985 IPR013216 Methyltransferase type 11 CS348_18985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_18985 IPR026669 Arsenite methyltransferase-like CS348_18990 IPR001279 Metallo-beta-lactamase CS348_18990 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CS348_18990 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CS348_18990 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CS348_18990 IPR017782 Hydroxyacylglutathione hydrolase CS348_18995 IPR018392 LysM domain CS348_18995 IPR036779 LysM domain superfamily CS348_18995 IPR023346 Lysozyme-like domain superfamily CS348_18995 IPR000189 Prokaryotic transglycosylase, active site CS348_18995 IPR008258 Transglycosylase SLT domain 1 CS348_19000 IPR013216 Methyltransferase type 11 CS348_19000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_19005 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CS348_19005 IPR022958 Uncharacterised protein family UPF0294 CS348_19005 IPR005135 Endonuclease/exonuclease/phosphatase CS348_19010 IPR011701 Major facilitator superfamily CS348_19010 IPR020846 Major facilitator superfamily domain CS348_19010 IPR036259 MFS transporter superfamily CS348_19015 IPR005119 LysR, substrate-binding CS348_19015 IPR000847 Transcription regulator HTH, LysR CS348_19015 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_19015 IPR036390 Winged helix DNA-binding domain superfamily CS348_19020 IPR020471 Aldo/keto reductase CS348_19020 IPR023210 NADP-dependent oxidoreductase domain CS348_19020 IPR036812 NADP-dependent oxidoreductase domain superfamily CS348_19020 IPR018170 Aldo/keto reductase, conserved site CS348_19055 IPR006543 Histidinol-phosphate phosphatase CS348_19055 IPR023214 HAD superfamily CS348_19055 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CS348_19055 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CS348_19055 IPR036412 HAD-like superfamily CS348_19060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_19060 IPR018449 NIL domain CS348_19060 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CS348_19060 IPR017871 ABC transporter, conserved site CS348_19060 IPR003439 ABC transporter-like CS348_19060 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CS348_19060 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria CS348_19060 IPR026253 Methionine import ATP-binding protein MetN CS348_19060 IPR003593 AAA+ ATPase domain CS348_19065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_19065 IPR035906 MetI-like superfamily CS348_19070 IPR004872 Lipoprotein NlpA family CS348_19075 IPR030852 Outer membrane lipoprotein RcsF CS348_19080 IPR036413 YaeB-like superfamily CS348_19080 IPR041369 TrmO, C-terminal CS348_19080 IPR040372 YaeB-like CS348_19080 IPR023370 TrmO-like, N-terminal domain CS348_19080 IPR023368 Uncharacterised protein family UPF0066, conserved site CS348_19080 IPR036414 YaeB, N-terminal domain superfamily CS348_19085 IPR036621 Anticodon-binding domain superfamily CS348_19085 IPR004154 Anticodon-binding CS348_19085 IPR002316 Proline-tRNA ligase, class IIa CS348_19085 IPR006195 Aminoacyl-tRNA synthetase, class II CS348_19085 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CS348_19085 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CS348_19085 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CS348_19085 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CS348_19085 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CS348_19085 IPR033730 Prokaryote proline-tRNA ligase core domain CS348_19090 IPR033450 NlpE, C-terminal OB domain CS348_19090 IPR038139 NlpE, C-terminal domain superfamily CS348_19090 IPR007298 Copper resistance lipoprotein NlpE CS348_19095 IPR000352 Peptide chain release factor class I CS348_19100 IPR011335 Restriction endonuclease type II-like CS348_19100 IPR038590 YaeQ superfamily CS348_19100 IPR009822 YaeQ CS348_19105 IPR009624 Uncharacterised protein family UPF0253 CS348_19110 IPR023534 Rof/RNase P-like CS348_19110 IPR009778 Modulator of Rho-dependent transcription termination CS348_19110 IPR038626 Rof-like superfamily CS348_19115 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CS348_19115 IPR012094 tRNA(Ile)-lysidine synthase CS348_19115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_19115 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain CS348_19115 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CS348_19115 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CS348_19120 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CS348_19120 IPR037478 YwkD-like domain CS348_19120 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CS348_19120 IPR037523 Vicinal oxygen chelate (VOC) domain CS348_19135 IPR029045 ClpP/crotonase-like domain superfamily CS348_19135 IPR001095 Acetyl-CoA carboxylase, alpha subunit CS348_19135 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CS348_19140 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CS348_19140 IPR040982 DNA polymerase III alpha subunit finger domain CS348_19140 IPR029460 DNA polymerase, helix-hairpin-helix motif CS348_19140 IPR004805 DNA polymerase III, alpha subunit CS348_19140 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CS348_19140 IPR003141 Polymerase/histidinol phosphatase, N-terminal CS348_19140 IPR004013 PHP domain CS348_19140 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CS348_19140 IPR016195 Polymerase/histidinol phosphatase-like CS348_19145 IPR022898 Ribonuclease HII CS348_19145 IPR036397 Ribonuclease H superfamily CS348_19145 IPR012337 Ribonuclease H-like superfamily CS348_19145 IPR001352 Ribonuclease HII/HIII CS348_19145 IPR024567 Ribonuclease HII/HIII domain CS348_19150 IPR003835 Glycosyl transferase, family 19 CS348_19155 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily CS348_19155 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal CS348_19155 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CS348_19155 IPR001451 Hexapeptide repeat CS348_19155 IPR018357 Hexapeptide transferase, conserved site CS348_19155 IPR011004 Trimeric LpxA-like superfamily CS348_19160 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CS348_19160 IPR029069 HotDog domain superfamily CS348_19160 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CS348_19165 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CS348_19165 IPR001451 Hexapeptide repeat CS348_19165 IPR018357 Hexapeptide transferase, conserved site CS348_19165 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD CS348_19165 IPR011004 Trimeric LpxA-like superfamily CS348_19170 IPR005632 Chaperone protein Skp CS348_19170 IPR024930 Skp domain superfamily CS348_19175 IPR010827 POTRA domain, BamA/TamA-like CS348_19175 IPR023707 Outer membrane protein assembly factor BamA CS348_19175 IPR034746 POTRA domain CS348_19175 IPR000184 Bacterial surface antigen (D15) CS348_19175 IPR039910 Surface antigen D15-like CS348_19180 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CS348_19180 IPR008915 Peptidase M50 CS348_19180 IPR001478 PDZ domain CS348_19180 IPR041489 PDZ domain 6 CS348_19180 IPR036034 PDZ superfamily CS348_19185 IPR000374 Phosphatidate cytidylyltransferase CS348_19190 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CS348_19190 IPR036424 Decaprenyl diphosphate synthase-like superfamily CS348_19190 IPR001441 Decaprenyl diphosphate synthase-like CS348_19200 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CS348_19200 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CS348_19200 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CS348_19200 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CS348_19200 IPR036291 NAD(P)-binding domain superfamily CS348_19200 IPR026877 DXP reductoisomerase C-terminal domain CS348_19205 IPR023584 Ribosome recycling factor domain CS348_19205 IPR036191 RRF superfamily CS348_19205 IPR002661 Ribosome recycling factor CS348_19210 IPR001048 Aspartate/glutamate/uridylate kinase CS348_19210 IPR036393 Acetylglutamate kinase-like superfamily CS348_19210 IPR015963 Uridylate kinase, bacteria CS348_19210 IPR011817 Uridylate kinase CS348_19215 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CS348_19215 IPR001816 Translation elongation factor EFTs/EF1B CS348_19215 IPR036402 Elongation factor Ts, dimerisation domain superfamily CS348_19215 IPR009060 UBA-like superfamily CS348_19215 IPR018101 Translation elongation factor Ts, conserved site CS348_19225 IPR001865 Ribosomal protein S2 CS348_19225 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CS348_19225 IPR018130 Ribosomal protein S2, conserved site CS348_19225 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CS348_19235 IPR000994 Peptidase M24 CS348_19235 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CS348_19235 IPR001714 Peptidase M24, methionine aminopeptidase CS348_19235 IPR036005 Creatinase/aminopeptidase-like CS348_19245 IPR002934 Polymerase, nucleotidyl transferase domain CS348_19245 IPR006674 HD domain CS348_19245 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CS348_19245 IPR002912 ACT domain CS348_19245 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme CS348_19245 IPR003607 HD/PDEase domain CS348_19250 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily CS348_19250 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CS348_19250 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CS348_19250 IPR011004 Trimeric LpxA-like superfamily CS348_19250 IPR001451 Hexapeptide repeat CS348_19250 IPR018357 Hexapeptide transferase, conserved site CS348_19255 IPR004736 MFS transporter, metabolite:H symporter CS348_19255 IPR036259 MFS transporter superfamily CS348_19255 IPR005828 Major facilitator, sugar transporter-like CS348_19255 IPR005829 Sugar transporter, conserved site CS348_19255 IPR011701 Major facilitator superfamily CS348_19255 IPR020846 Major facilitator superfamily domain CS348_19260 IPR020911 Uncharacterised protein family UPF0325 CS348_19270 IPR042070 PucR C-terminal helix-turn-helix domain superfamily CS348_19270 IPR008599 Putative sugar diacid recognition CS348_19270 IPR041522 CdaR, GGDEF-like domain CS348_19270 IPR025736 PucR C-terminal helix-turn-helix domain CS348_19275 IPR036034 PDZ superfamily CS348_19275 IPR011782 Peptidase S1C, Do CS348_19275 IPR001478 PDZ domain CS348_19275 IPR009003 Peptidase S1, PA clan CS348_19275 IPR001940 Peptidase S1C CS348_19280 IPR006261 dNTP triphosphohydrolase CS348_19280 IPR020779 dNTP triphosphohydrolase, type 1 CS348_19280 IPR026875 Phosphohydrolase-associated domain CS348_19280 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily CS348_19280 IPR003607 HD/PDEase domain CS348_19280 IPR006674 HD domain CS348_19285 IPR010049 MTA/SAH nucleosidase CS348_19285 IPR035994 Nucleoside phosphorylase superfamily CS348_19285 IPR000845 Nucleoside phosphorylase domain CS348_19290 IPR023544 ABC transporter, vitamin B12-binding protein CS348_19290 IPR002491 ABC transporter periplasmic binding domain CS348_19295 IPR005115 Uncharacterised domain UPF0126 CS348_19300 IPR035903 HesB-like domain superfamily CS348_19300 IPR023063 FeS cluster insertion protein ErpA CS348_19300 IPR017870 FeS cluster insertion, C-terminal, conserved site CS348_19300 IPR016092 FeS cluster insertion protein CS348_19300 IPR000361 FeS cluster biogenesis CS348_19305 IPR014743 Chloride channel, core CS348_19305 IPR023861 Chloride channel, ClcA CS348_19305 IPR001807 Chloride channel, voltage gated CS348_19310 IPR015424 Pyridoxal phosphate-dependent transferase CS348_19310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_19310 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CS348_19310 IPR005814 Aminotransferase class-III CS348_19310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_19315 IPR037294 ABC transporter, BtuC-like CS348_19315 IPR000522 ABC transporter, permease protein, BtuC-like CS348_19320 IPR002491 ABC transporter periplasmic binding domain CS348_19325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_19325 IPR017871 ABC transporter, conserved site CS348_19325 IPR003439 ABC transporter-like CS348_19325 IPR003593 AAA+ ATPase domain CS348_19330 IPR012910 TonB-dependent receptor, plug domain CS348_19330 IPR010105 TonB-dependent siderophore receptor CS348_19330 IPR010917 TonB-dependent receptor, conserved site CS348_19330 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CS348_19330 IPR010916 TonB box, conserved site CS348_19330 IPR000531 TonB-dependent receptor-like, beta-barrel CS348_19330 IPR039423 TonB-dependent receptor-like CS348_19330 IPR037066 TonB-dependent receptor, plug domain superfamily CS348_19335 IPR001264 Glycosyl transferase, family 51 CS348_19335 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain CS348_19335 IPR011813 Penicillin-binding protein 1B CS348_19335 IPR036950 Penicillin binding protein transglycosylase domain CS348_19335 IPR012338 Beta-lactamase/transpeptidase-like CS348_19335 IPR001460 Penicillin-binding protein, transpeptidase CS348_19335 IPR028166 Bifunctional transglycosylase second domain CS348_19335 IPR023346 Lysozyme-like domain superfamily CS348_19340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_19340 IPR007502 Helicase-associated domain CS348_19340 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CS348_19340 IPR011545 DEAD/DEAH box helicase domain CS348_19340 IPR010225 ATP-dependent helicase HrpB CS348_19340 IPR001650 Helicase, C-terminal CS348_19340 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_19345 IPR009097 Cyclic phosphodiesterase CS348_19345 IPR014051 Phosphoesterase, HXTX CS348_19345 IPR004175 RNA 2',3'-cyclic phosphodiesterase CS348_19350 IPR005224 Sugar fermentation stimulation protein CS348_19350 IPR040452 Sugar fermentation stimulation protein, C-terminal CS348_19350 IPR041465 SfsA, N-terminal OB domain CS348_19355 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CS348_19355 IPR012784 RNA polymerase-binding transcription factor DksA CS348_19355 IPR000962 Zinc finger, DksA/TraR C4-type CS348_19355 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CS348_19355 IPR037187 DksA, N-terminal domain superfamily CS348_19360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_19360 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CS348_19360 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CS348_19360 IPR022380 Glutamyl-Q tRNA(Asp) synthetase CS348_19365 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CS348_19365 IPR010206 Poly(A) polymerase I CS348_19365 IPR002646 Poly A polymerase, head domain CS348_19365 IPR025866 Polymerase A arginine-rich C-terminal domain CS348_19370 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CS348_19370 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CS348_19380 IPR016147 Pili assembly chaperone, N-terminal CS348_19380 IPR016148 Pili assembly chaperone, C-terminal CS348_19380 IPR018046 Pili assembly chaperone, conserved site CS348_19380 IPR001829 Pili assembly chaperone, bacterial CS348_19380 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_19380 IPR008962 PapD-like superfamily CS348_19380 IPR013783 Immunoglobulin-like fold CS348_19385 IPR037224 PapC, N-terminal domain superfamily CS348_19385 IPR025885 PapC, N-terminal domain CS348_19385 IPR000015 Outer membrane usher protein CS348_19385 IPR025949 PapC-like, C-terminal domain CS348_19385 IPR042186 Outer membrane usher protein FimD, plug domain CS348_19385 IPR018030 Fimbrial membrane usher, conserved site CS348_19390 IPR008966 Adhesion domain superfamily CS348_19390 IPR036937 Fimbrial-type adhesion domain superfamily CS348_19390 IPR000259 Fimbrial-type adhesion domain CS348_19395 IPR008966 Adhesion domain superfamily CS348_19395 IPR000259 Fimbrial-type adhesion domain CS348_19395 IPR036937 Fimbrial-type adhesion domain superfamily CS348_19400 IPR008966 Adhesion domain superfamily CS348_19400 IPR000259 Fimbrial-type adhesion domain CS348_19400 IPR036937 Fimbrial-type adhesion domain superfamily CS348_19405 IPR000259 Fimbrial-type adhesion domain CS348_19405 IPR036937 Fimbrial-type adhesion domain superfamily CS348_19405 IPR008966 Adhesion domain superfamily CS348_19405 IPR017014 Fimbrial-like protein YadC CS348_19410 IPR040442 Pyruvate kinase-like domain superfamily CS348_19410 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_19410 IPR003700 Ketopantoate hydroxymethyltransferase CS348_19415 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CS348_19415 IPR003721 Pantoate-beta-alanine ligase CS348_19415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_19425 IPR003190 Aspartate decarboxylase CS348_19425 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_19430 IPR002509 NodB homology domain CS348_19430 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CS348_19435 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CS348_19435 IPR004701 Phosphotransferase system, mannose-type IIA component CS348_19435 IPR033887 PTS system mannose/sorbose specific IIA subunit CS348_19445 IPR016147 Pili assembly chaperone, N-terminal CS348_19445 IPR016148 Pili assembly chaperone, C-terminal CS348_19445 IPR001829 Pili assembly chaperone, bacterial CS348_19445 IPR018046 Pili assembly chaperone, conserved site CS348_19445 IPR013783 Immunoglobulin-like fold CS348_19445 IPR008962 PapD-like superfamily CS348_19445 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_19450 IPR000015 Outer membrane usher protein CS348_19450 IPR018030 Fimbrial membrane usher, conserved site CS348_19450 IPR025885 PapC, N-terminal domain CS348_19450 IPR025949 PapC-like, C-terminal domain CS348_19450 IPR042186 Outer membrane usher protein FimD, plug domain CS348_19450 IPR037224 PapC, N-terminal domain superfamily CS348_19455 IPR000412 ABC-2 transporter CS348_19455 IPR013525 ABC-2 type transporter CS348_19460 IPR003439 ABC transporter-like CS348_19460 IPR003593 AAA+ ATPase domain CS348_19460 IPR017871 ABC transporter, conserved site CS348_19460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_19465 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CS348_19465 IPR001765 Carbonic anhydrase CS348_19465 IPR036874 Carbonic anhydrase superfamily CS348_19470 IPR029057 Phosphoribosyltransferase-like CS348_19470 IPR005904 Hypoxanthine phosphoribosyl transferase CS348_19470 IPR000836 Phosphoribosyltransferase domain CS348_19475 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CS348_19475 IPR002372 Pyrrolo-quinoline quinone repeat CS348_19475 IPR017511 PQQ-dependent membrane bound dehydrogenase CS348_19475 IPR001479 Quinoprotein dehydrogenase, conserved site CS348_19475 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CS348_19480 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_19480 IPR011706 Multicopper oxidase, type 2 CS348_19480 IPR011707 Multicopper oxidase, type 3 CS348_19480 IPR002355 Multicopper oxidase, copper-binding site CS348_19480 IPR001117 Multicopper oxidase, type 1 CS348_19480 IPR008972 Cupredoxin CS348_19485 IPR038432 PulS/OutS-like superfamily CS348_19485 IPR019114 Chaperone lipoprotein, PulS/OutS-like CS348_19490 IPR030374 Polyamine biosynthesis domain CS348_19490 IPR001045 Spermidine/spermine synthases CS348_19490 IPR035246 Spermidine synthase, tetramerisation domain CS348_19490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_19490 IPR037163 Spermidine synthase, tetramerisation domain superfamily CS348_19490 IPR030373 Polyamine biosynthesis domain, conserved site CS348_19495 IPR009165 S-adenosylmethionine decarboxylase, bacterial CS348_19495 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic CS348_19495 IPR016067 S-adenosylmethionine decarboxylase, core CS348_19500 IPR014036 DeoR C-terminal sensor domain CS348_19500 IPR001034 DeoR-type HTH domain CS348_19500 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_19500 IPR037171 NagB/RpiA transferase-like CS348_19500 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_19500 IPR036390 Winged helix DNA-binding domain superfamily CS348_19505 IPR005255 PdxA family CS348_19510 IPR042213 Nucleotide-binding, C-terminal domain superfamily CS348_19510 IPR010737 Four-carbon acid sugar kinase, N-terminal domain CS348_19510 IPR031475 Nucleotide-binding C-terminal domain CS348_19510 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily CS348_19520 IPR008249 Uncharacterised protein family UPF0231 CS348_19525 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CS348_19525 IPR036008 Aconitase, iron-sulfur domain CS348_19525 IPR015933 Aconitase B, HEAT-like domain CS348_19525 IPR036288 Aconitase B, HEAT-like domain superfamily CS348_19525 IPR018136 Aconitase family, 4Fe-4S cluster binding site CS348_19525 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CS348_19525 IPR015932 Aconitase, domain 2 CS348_19525 IPR004406 Aconitase B CS348_19525 IPR015929 Aconitase B, swivel CS348_19525 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CS348_19530 IPR021728 Protein of unknown function DUF3300 CS348_19545 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CS348_19545 IPR006258 Dihydrolipoamide dehydrogenase CS348_19545 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CS348_19545 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CS348_19545 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CS348_19545 IPR023753 FAD/NAD(P)-binding domain CS348_19545 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_19550 IPR000089 Biotin/lipoyl attachment CS348_19550 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex CS348_19550 IPR004167 Peripheral subunit-binding domain CS348_19550 IPR011053 Single hybrid motif CS348_19550 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CS348_19550 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CS348_19550 IPR036625 E3-binding domain superfamily CS348_19550 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CS348_19555 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CS348_19555 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CS348_19555 IPR029061 Thiamin diphosphate-binding fold CS348_19555 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CS348_19555 IPR004660 Pyruvate dehydrogenase E1 component CS348_19555 IPR005474 Transketolase, N-terminal CS348_19565 IPR008920 Transcription regulator FadR/GntR, C-terminal CS348_19565 IPR036390 Winged helix DNA-binding domain superfamily CS348_19565 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_19565 IPR000524 Transcription regulator HTH, GntR CS348_19565 IPR011711 GntR, C-terminal CS348_19570 IPR004840 Amino acid permease, conserved site CS348_19570 IPR004841 Amino acid permease/ SLC12A domain CS348_19575 IPR001927 Sodium:galactoside symporter CS348_19575 IPR036259 MFS transporter superfamily CS348_19575 IPR018043 Sodium:galactoside symporter, conserved site CS348_19575 IPR039672 Lactose permease-like CS348_19580 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CS348_19580 IPR006710 Glycoside hydrolase, family 43 CS348_19580 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain CS348_19580 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily CS348_19585 IPR031347 Protein AmpE CS348_19590 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CS348_19590 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CS348_19595 IPR004393 Nicotinate-nucleotide pyrophosphorylase CS348_19595 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CS348_19595 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CS348_19595 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CS348_19595 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CS348_19595 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CS348_19595 IPR013785 Aldolase-type TIM barrel CS348_19605 IPR012902 Prokaryotic N-terminal methylation site CS348_19610 IPR007831 General secretory system II, protein E, N-terminal CS348_19610 IPR001482 Type II/IV secretion system protein CS348_19610 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_19615 IPR042094 Type II secretion system F domain superfamily CS348_19615 IPR018076 Type II secretion system F domain CS348_19615 IPR001992 Type II secretion system conserved site CS348_19615 IPR003004 GspF/PilC family CS348_19620 IPR001093 IMP dehydrogenase/GMP reductase CS348_19620 IPR013785 Aldolase-type TIM barrel CS348_19620 IPR005993 GMP reductase CS348_19620 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CS348_19625 IPR001977 Dephospho-CoA kinase CS348_19625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_19630 IPR036268 ZapD domain superfamily CS348_19630 IPR027462 Z ring-associated protein D, C-terminal CS348_19630 IPR009777 Cell division protein ZapD CS348_19635 IPR005584 DNA gyrase inhibitor YacG CS348_19635 IPR013088 Zinc finger, NHR/GATA-type CS348_19650 IPR015797 NUDIX hydrolase-like domain superfamily CS348_19650 IPR020084 NUDIX hydrolase, conserved site CS348_19650 IPR000086 NUDIX hydrolase domain CS348_19650 IPR020476 NUDIX hydrolase CS348_19650 IPR003561 Mutator MutT CS348_19655 IPR011130 SecA, preprotein cross-linking domain CS348_19655 IPR036266 SecA, Wing/Scaffold superfamily CS348_19655 IPR011115 SecA DEAD-like, N-terminal CS348_19655 IPR020937 SecA conserved site CS348_19655 IPR036670 SecA, preprotein cross-linking domain superfamily CS348_19655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_19655 IPR004027 SEC-C motif CS348_19655 IPR000185 Protein translocase subunit SecA CS348_19655 IPR014018 SecA motor DEAD CS348_19655 IPR011116 SecA Wing/Scaffold CS348_19660 IPR009502 Secretion monitor CS348_19665 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CS348_19665 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_19665 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CS348_19665 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CS348_19670 IPR000158 Cell division protein FtsZ CS348_19670 IPR003008 Tubulin/FtsZ, GTPase domain CS348_19670 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CS348_19670 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CS348_19670 IPR008280 Tubulin/FtsZ, C-terminal CS348_19670 IPR024757 Cell division protein FtsZ, C-terminal CS348_19670 IPR020805 Cell division protein FtsZ, conserved site CS348_19675 IPR003494 SHS2 domain inserted in FtsA CS348_19675 IPR020823 Cell division protein FtsA CS348_19680 IPR005548 Cell division protein FtsQ/DivIB CS348_19680 IPR026579 Cell division protein FtsQ CS348_19680 IPR034746 POTRA domain CS348_19680 IPR013685 POTRA domain, FtsQ-type CS348_19685 IPR013815 ATP-grasp fold, subdomain 1 CS348_19685 IPR005905 D-alanine--D-alanine ligase CS348_19685 IPR011095 D-alanine--D-alanine ligase, C-terminal CS348_19685 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CS348_19685 IPR016185 Pre-ATP-grasp domain superfamily CS348_19685 IPR011761 ATP-grasp fold CS348_19685 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CS348_19690 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CS348_19690 IPR000713 Mur ligase, N-terminal catalytic domain CS348_19690 IPR013221 Mur ligase, central CS348_19690 IPR036615 Mur ligase, C-terminal domain superfamily CS348_19690 IPR004101 Mur ligase, C-terminal CS348_19690 IPR036565 Mur-like, catalytic domain superfamily CS348_19695 IPR006009 N-acetylglucosaminyltransferase, MurG CS348_19695 IPR007235 Glycosyl transferase, family 28, C-terminal CS348_19695 IPR004276 Glycosyltransferase family 28, N-terminal domain CS348_19700 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CS348_19700 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CS348_19700 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CS348_19705 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CS348_19705 IPR036615 Mur ligase, C-terminal domain superfamily CS348_19705 IPR004101 Mur ligase, C-terminal CS348_19705 IPR036565 Mur-like, catalytic domain superfamily CS348_19705 IPR013221 Mur ligase, central CS348_19710 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CS348_19710 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CS348_19710 IPR000715 Glycosyl transferase, family 4 CS348_19715 IPR036565 Mur-like, catalytic domain superfamily CS348_19715 IPR004101 Mur ligase, C-terminal CS348_19715 IPR036615 Mur ligase, C-terminal domain superfamily CS348_19715 IPR013221 Mur ligase, central CS348_19715 IPR000713 Mur ligase, N-terminal catalytic domain CS348_19715 IPR035911 MurE/MurF, N-terminal CS348_19715 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CS348_19720 IPR013221 Mur ligase, central CS348_19720 IPR000713 Mur ligase, N-terminal catalytic domain CS348_19720 IPR035911 MurE/MurF, N-terminal CS348_19720 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CS348_19720 IPR036565 Mur-like, catalytic domain superfamily CS348_19720 IPR036615 Mur ligase, C-terminal domain superfamily CS348_19720 IPR004101 Mur ligase, C-terminal CS348_19725 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CS348_19725 IPR001460 Penicillin-binding protein, transpeptidase CS348_19725 IPR012338 Beta-lactamase/transpeptidase-like CS348_19725 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CS348_19725 IPR005311 Penicillin-binding protein, dimerisation domain CS348_19730 IPR011922 Cell division protein FtsL CS348_19735 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CS348_19735 IPR002903 Ribosomal RNA small subunit methyltransferase H CS348_19735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_19740 IPR035642 MraZ, N-terminal CS348_19740 IPR020603 MraZ domain CS348_19740 IPR038619 MraZ superfamily CS348_19740 IPR037914 SpoVT-AbrB domain superfamily CS348_19740 IPR035644 MraZ, C-terminal CS348_19740 IPR003444 Transcriptional regulator MraZ CS348_19740 IPR007159 SpoVT-AbrB domain CS348_19745 IPR028082 Periplasmic binding protein-like I CS348_19745 IPR012781 D-fructose-responsive transcription factor CS348_19745 IPR000843 LacI-type HTH domain CS348_19745 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_19745 IPR001761 Periplasmic binding protein/LacI sugar binding domain CS348_19750 IPR002912 ACT domain CS348_19750 IPR039557 AHAS, ACT domain CS348_19750 IPR004789 Acetolactate synthase, small subunit CS348_19750 IPR019455 Acetolactate synthase, small subunit, C-terminal CS348_19750 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CS348_19755 IPR012846 Acetolactate synthase, large subunit, biosynthetic CS348_19755 IPR012000 Thiamine pyrophosphate enzyme, central domain CS348_19755 IPR000399 TPP-binding enzyme, conserved site CS348_19755 IPR029035 DHS-like NAD/FAD-binding domain superfamily CS348_19755 IPR029061 Thiamin diphosphate-binding fold CS348_19755 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CS348_19755 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CS348_19755 IPR039368 Acetolactate synthase large subunit, TPP binding domain CS348_19760 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_19760 IPR036390 Winged helix DNA-binding domain superfamily CS348_19760 IPR005119 LysR, substrate-binding CS348_19760 IPR000847 Transcription regulator HTH, LysR CS348_19765 IPR012570 Leucine operon leader peptide CS348_19770 IPR013785 Aldolase-type TIM barrel CS348_19770 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CS348_19770 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CS348_19770 IPR005671 2-isopropylmalate synthase, bacterial-type CS348_19770 IPR000891 Pyruvate carboxyltransferase CS348_19770 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CS348_19775 IPR004429 Isopropylmalate dehydrogenase CS348_19775 IPR024084 Isopropylmalate dehydrogenase-like domain CS348_19775 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CS348_19780 IPR004430 3-isopropylmalate dehydratase, large subunit CS348_19780 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CS348_19780 IPR018136 Aconitase family, 4Fe-4S cluster binding site CS348_19780 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CS348_19780 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CS348_19780 IPR036008 Aconitase, iron-sulfur domain CS348_19785 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CS348_19785 IPR033940 3-isopropylmalate dehydratase, swivel domain CS348_19785 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CS348_19785 IPR004431 3-isopropylmalate dehydratase, small subunit CS348_19795 IPR000914 Solute-binding protein family 5 domain CS348_19795 IPR036390 Winged helix DNA-binding domain superfamily CS348_19795 IPR023767 Transcriptional regulator SgrR CS348_19795 IPR039424 Solute-binding protein family 5 CS348_19795 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CS348_19800 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria CS348_19800 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter CS348_19800 IPR006061 Solute-binding family 1, conserved site CS348_19805 IPR005947 Thiamine ABC transporter, permease protein CS348_19805 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_19805 IPR035906 MetI-like superfamily CS348_19810 IPR003439 ABC transporter-like CS348_19810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_19810 IPR017871 ABC transporter, conserved site CS348_19810 IPR003593 AAA+ ATPase domain CS348_19810 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ CS348_19815 IPR032818 DedA family CS348_19815 IPR032816 SNARE associated Golgi protein CS348_19820 IPR003313 AraC-type arabinose-binding/dimerisation domain CS348_19820 IPR009057 Homeobox-like domain superfamily CS348_19820 IPR037923 Transcription regulator HTH-like CS348_19820 IPR018062 HTH domain AraC-type, conserved site CS348_19820 IPR020449 Transcription regulator HTH, AraC- type CS348_19820 IPR018060 DNA binding HTH domain, AraC-type CS348_19825 IPR005929 Ribulokinase CS348_19825 IPR018485 Carbohydrate kinase, FGGY, C-terminal CS348_19830 IPR024664 L-arabinose isomerase, C-terminal CS348_19830 IPR038583 L-arabinose isomerase, N-terminal domain superfamily CS348_19830 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CS348_19830 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily CS348_19830 IPR003762 L-arabinose isomerase CS348_19835 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD CS348_19835 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CS348_19835 IPR004661 L-ribulose-5-phosphate 4-epimerase CS348_19835 IPR001303 Class II aldolase/adducin N-terminal CS348_19855 IPR006172 DNA-directed DNA polymerase, family B CS348_19855 IPR036397 Ribonuclease H superfamily CS348_19855 IPR017964 DNA-directed DNA polymerase, family B, conserved site CS348_19855 IPR012337 Ribonuclease H-like superfamily CS348_19855 IPR023211 DNA polymerase, palm domain superfamily CS348_19855 IPR042087 DNA polymerase family B, C-terminal domain CS348_19855 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain CS348_19855 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain CS348_19860 IPR040765 RapA, N-terminal Tudor like domain 1 CS348_19860 IPR040766 RapA, N-terminal Tudor-like domain 2 CS348_19860 IPR023949 RNA polymerase-associated protein RapA CS348_19860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_19860 IPR022737 RNA polymerase recycling, bacterial, C-terminal CS348_19860 IPR038718 SNF2-like, N-terminal domain superfamily CS348_19860 IPR000330 SNF2-related, N-terminal domain CS348_19860 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_19860 IPR001650 Helicase, C-terminal CS348_19865 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CS348_19865 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_19865 IPR006145 Pseudouridine synthase, RsuA/RluA CS348_19865 IPR006225 Pseudouridine synthase, RluC/RluD CS348_19870 IPR029024 TerB-like CS348_19870 IPR036869 Chaperone J-domain superfamily CS348_19870 IPR023749 Co-chaperone DjlA CS348_19870 IPR001623 DnaJ domain CS348_19870 IPR007791 Co-chaperone DjlA, N-terminal CS348_19875 IPR020889 LPS-assembly protein LptD CS348_19875 IPR007543 LptD, C-terminal CS348_19875 IPR005653 Organic solvent tolerance-like, N-terminal CS348_19880 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CS348_19880 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CS348_19880 IPR023034 Peptidyl-prolyl isomerase SurA CS348_19880 IPR015391 SurA N-terminal CS348_19880 IPR027304 Trigger factor/SurA domain superfamily CS348_19885 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase CS348_19885 IPR005255 PdxA family CS348_19890 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CS348_19890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_19890 IPR023165 rRNA adenine dimethylase-like CS348_19890 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CS348_19890 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CS348_19890 IPR011530 Ribosomal RNA adenine dimethylase CS348_19895 IPR007474 ApaG domain CS348_19895 IPR023065 Uncharacterised protein family ApaG CS348_19895 IPR036767 ApaG domain superfamily CS348_19900 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CS348_19900 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CS348_19900 IPR029052 Metallo-dependent phosphatase-like CS348_19905 IPR001796 Dihydrofolate reductase domain CS348_19905 IPR017925 Dihydrofolate reductase conserved site CS348_19905 IPR012259 Dihydrofolate reductase CS348_19905 IPR024072 Dihydrofolate reductase-like domain superfamily CS348_19910 IPR004771 K+/H+ exchanger CS348_19910 IPR023941 Glutathione-regulated potassium-efflux system protein KefC CS348_19910 IPR006036 Potassium uptake protein TrkA CS348_19910 IPR038770 Sodium/solute symporter superfamily CS348_19910 IPR036291 NAD(P)-binding domain superfamily CS348_19910 IPR003148 Regulator of K+ conductance, N-terminal CS348_19910 IPR006153 Cation/H+ exchanger CS348_19915 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF CS348_19915 IPR029039 Flavoprotein-like superfamily CS348_19915 IPR003680 Flavodoxin-like fold CS348_19955 IPR010305 Protein of unknown function DUF903 CS348_19955 IPR010920 LSM domain superfamily CS348_19960 IPR020846 Major facilitator superfamily domain CS348_19960 IPR005828 Major facilitator, sugar transporter-like CS348_19960 IPR036259 MFS transporter superfamily CS348_19965 IPR012206 Ferredoxin-like, FixX CS348_19970 IPR002938 FAD-binding domain CS348_19970 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_19970 IPR039651 Protein FixC-like CS348_19975 IPR029035 DHS-like NAD/FAD-binding domain superfamily CS348_19975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_19975 IPR023461 Electron transfer flavoprotein FixB subunit CS348_19975 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CS348_19975 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CS348_19975 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CS348_19975 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CS348_19980 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CS348_19980 IPR023463 Electron transfer flavoprotein, FixA subunit CS348_19980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_19980 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CS348_19980 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CS348_19980 IPR012255 Electron transfer flavoprotein, beta subunit CS348_19990 IPR000060 BCCT transporter family CS348_19990 IPR018093 BCCT transporter, conserved site CS348_19990 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT CS348_19995 IPR006089 Acyl-CoA dehydrogenase, conserved site CS348_19995 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CS348_19995 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CS348_19995 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CS348_19995 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CS348_19995 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CS348_19995 IPR023450 Crotonobetainyl-CoA reductase CaiA CS348_19995 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CS348_20000 IPR003673 CoA-transferase family III CS348_20000 IPR023606 CoA-transferase family III domain superfamily CS348_20000 IPR023452 L-carnitine CoA-transferase CaiB CS348_20005 IPR042099 AMP-dependent synthetase-like superfamily CS348_20005 IPR025110 AMP-binding enzyme, C-terminal domain CS348_20005 IPR020845 AMP-binding, conserved site CS348_20005 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC CS348_20005 IPR000873 AMP-dependent synthetase/ligase CS348_20010 IPR014748 Enoyl-CoA hydratase, C-terminal CS348_20010 IPR001753 Enoyl-CoA hydratase/isomerase CS348_20010 IPR022852 Carnitinyl-CoA dehydratase CS348_20010 IPR029045 ClpP/crotonase-like domain superfamily CS348_20010 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CS348_20015 IPR023446 Carnitine operon protein CaiE CS348_20015 IPR001451 Hexapeptide repeat CS348_20015 IPR011004 Trimeric LpxA-like superfamily CS348_20020 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_20020 IPR020357 Transcription regulator CaiF/GrlA CS348_20025 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CS348_20025 IPR011761 ATP-grasp fold CS348_20025 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CS348_20025 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CS348_20025 IPR011607 Methylglyoxal synthase-like domain CS348_20025 IPR036914 Methylglyoxal synthase-like domain superfamily CS348_20025 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CS348_20025 IPR016185 Pre-ATP-grasp domain superfamily CS348_20025 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CS348_20025 IPR006275 Carbamoyl-phosphate synthase, large subunit CS348_20030 IPR017926 Glutamine amidotransferase CS348_20030 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CS348_20030 IPR029062 Class I glutamine amidotransferase-like CS348_20030 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CS348_20030 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CS348_20030 IPR006274 Carbamoyl-phosphate synthase, small subunit CS348_20040 IPR023940 Dihydrodipicolinate reductase CS348_20040 IPR000846 Dihydrodipicolinate reductase, N-terminal CS348_20040 IPR022663 Dihydrodipicolinate reductase, C-terminal CS348_20040 IPR036291 NAD(P)-binding domain superfamily CS348_20040 IPR022664 Dihydrodipicolinate reductase, conserved site CS348_20045 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG CS348_20045 IPR002736 Triphosphoribosyl-dephospho-CoA protein CS348_20050 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CS348_20055 IPR037171 NagB/RpiA transferase-like CS348_20055 IPR006472 Citrate lyase, alpha subunit CS348_20060 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CS348_20060 IPR011206 Citrate lyase beta subunit-like CS348_20060 IPR040442 Pyruvate kinase-like domain superfamily CS348_20060 IPR006475 Citrate lyase, beta subunit, bacteria CS348_20060 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_20065 IPR006495 Citrate lyase acyl carrier protein CitD CS348_20065 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CS348_20070 IPR016181 Acyl-CoA N-acyltransferase CS348_20070 IPR005216 Citrate lyase ligase CS348_20070 IPR013166 Citrate lyase ligase, C-terminal CS348_20070 IPR004821 Cytidyltransferase-like domain CS348_20070 IPR000182 GNAT domain CS348_20070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_20075 IPR004679 2-hydroxycarboxylate transporter CS348_20075 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes CS348_20080 IPR023424 Oxaloacetate decarboxylase gamma chain, probable CS348_20080 IPR005899 Sodium ion-translocating decarboxylase CS348_20085 IPR000891 Pyruvate carboxyltransferase CS348_20085 IPR013785 Aldolase-type TIM barrel CS348_20085 IPR001882 Biotin-binding site CS348_20085 IPR000089 Biotin/lipoyl attachment CS348_20085 IPR011053 Single hybrid motif CS348_20085 IPR003379 Carboxylase, conserved domain CS348_20085 IPR005776 Oxaloacetate decarboxylase, alpha subunit CS348_20090 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit CS348_20095 IPR003594 Histidine kinase/HSP90-like ATPase CS348_20095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_20095 IPR005467 Histidine kinase domain CS348_20095 IPR029151 Periplasmic sensor-like domain superfamily CS348_20095 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB CS348_20095 IPR000014 PAS domain CS348_20095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_20095 IPR035965 PAS domain superfamily CS348_20095 IPR033463 Single cache domain 3 CS348_20100 IPR011006 CheY-like superfamily CS348_20100 IPR001789 Signal transduction response regulator, receiver domain CS348_20100 IPR024187 Signal transduction response regulator, citrate/malate metabolism CS348_20100 IPR028141 Transcriptional regulator CS348_20105 IPR036452 Ribonucleoside hydrolase-like CS348_20105 IPR022976 Non-specific ribonucleoside hydrolase RihC CS348_20105 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CS348_20105 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CS348_20115 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CS348_20120 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CS348_20125 IPR001872 Peptidase A8, signal peptidase II CS348_20130 IPR010663 Zinc finger, FPG/IleRS-type CS348_20130 IPR002300 Aminoacyl-tRNA synthetase, class Ia CS348_20130 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CS348_20130 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CS348_20130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_20130 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CS348_20130 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CS348_20130 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CS348_20130 IPR002301 Isoleucine-tRNA ligase CS348_20130 IPR023585 Isoleucine-tRNA ligase, type 1 CS348_20135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_20135 IPR002606 Riboflavin kinase, bacterial CS348_20135 IPR015864 FAD synthetase CS348_20135 IPR023465 Riboflavin kinase domain superfamily CS348_20135 IPR023468 Riboflavin kinase CS348_20135 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CS348_20140 IPR020105 Uncharacterised protein family YaaY CS348_20145 IPR002583 Ribosomal protein S20 CS348_20145 IPR036510 Ribosomal protein S20 superfamily CS348_20150 IPR039672 Lactose permease-like CS348_20150 IPR020846 Major facilitator superfamily domain CS348_20150 IPR018043 Sodium:galactoside symporter, conserved site CS348_20150 IPR001927 Sodium:galactoside symporter CS348_20150 IPR036259 MFS transporter superfamily CS348_20160 IPR036390 Winged helix DNA-binding domain superfamily CS348_20160 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_20160 IPR000847 Transcription regulator HTH, LysR CS348_20160 IPR005119 LysR, substrate-binding CS348_20165 IPR004670 Na+/H+ antiporter NhaA CS348_20165 IPR023171 Na/H antiporter domain superfamily CS348_20180 IPR023885 4Fe4S-binding SPASM domain CS348_20180 IPR007197 Radical SAM CS348_20180 IPR013785 Aldolase-type TIM barrel CS348_20180 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme CS348_20185 IPR017850 Alkaline-phosphatase-like, core domain superfamily CS348_20185 IPR024607 Sulfatase, conserved site CS348_20185 IPR032158 Domain of unknown function DUF4994 CS348_20185 IPR000917 Sulfatase, N-terminal CS348_20195 IPR029052 Metallo-dependent phosphatase-like CS348_20195 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CS348_20195 IPR006179 5'-Nucleotidase/apyrase CS348_20195 IPR006146 5'-Nucleotidase, conserved site CS348_20195 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CS348_20195 IPR008334 5'-Nucleotidase, C-terminal CS348_20210 IPR000847 Transcription regulator HTH, LysR CS348_20210 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_20210 IPR036390 Winged helix DNA-binding domain superfamily CS348_20210 IPR005119 LysR, substrate-binding CS348_20230 IPR018046 Pili assembly chaperone, conserved site CS348_20230 IPR016147 Pili assembly chaperone, N-terminal CS348_20230 IPR016148 Pili assembly chaperone, C-terminal CS348_20230 IPR001829 Pili assembly chaperone, bacterial CS348_20230 IPR008962 PapD-like superfamily CS348_20230 IPR013783 Immunoglobulin-like fold CS348_20230 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_20235 IPR036937 Fimbrial-type adhesion domain superfamily CS348_20235 IPR039458 FimA-like CS348_20235 IPR008966 Adhesion domain superfamily CS348_20240 IPR036937 Fimbrial-type adhesion domain superfamily CS348_20240 IPR008966 Adhesion domain superfamily CS348_20240 IPR000259 Fimbrial-type adhesion domain CS348_20245 IPR000259 Fimbrial-type adhesion domain CS348_20245 IPR008966 Adhesion domain superfamily CS348_20245 IPR036937 Fimbrial-type adhesion domain superfamily CS348_20250 IPR037224 PapC, N-terminal domain superfamily CS348_20250 IPR000015 Outer membrane usher protein CS348_20250 IPR018030 Fimbrial membrane usher, conserved site CS348_20250 IPR042186 Outer membrane usher protein FimD, plug domain CS348_20250 IPR025949 PapC-like, C-terminal domain CS348_20250 IPR025885 PapC, N-terminal domain CS348_20255 IPR016147 Pili assembly chaperone, N-terminal CS348_20255 IPR001829 Pili assembly chaperone, bacterial CS348_20255 IPR016148 Pili assembly chaperone, C-terminal CS348_20255 IPR018046 Pili assembly chaperone, conserved site CS348_20255 IPR008962 PapD-like superfamily CS348_20255 IPR013783 Immunoglobulin-like fold CS348_20255 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_20260 IPR008966 Adhesion domain superfamily CS348_20260 IPR036937 Fimbrial-type adhesion domain superfamily CS348_20260 IPR000259 Fimbrial-type adhesion domain CS348_20275 IPR011583 Chitinase II CS348_20275 IPR029070 Chitinase insertion domain superfamily CS348_20275 IPR001223 Glycoside hydrolase family 18, catalytic domain CS348_20275 IPR017853 Glycoside hydrolase superfamily CS348_20295 IPR036390 Winged helix DNA-binding domain superfamily CS348_20295 IPR005119 LysR, substrate-binding CS348_20295 IPR037416 Nodulation protein D, PBP2 CS348_20295 IPR000847 Transcription regulator HTH, LysR CS348_20295 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_20300 IPR008971 HSP40/DnaJ peptide-binding CS348_20300 IPR018253 DnaJ domain, conserved site CS348_20300 IPR036869 Chaperone J-domain superfamily CS348_20300 IPR001623 DnaJ domain CS348_20300 IPR012724 Chaperone DnaJ CS348_20300 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CS348_20300 IPR002939 Chaperone DnaJ, C-terminal CS348_20300 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CS348_20305 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CS348_20305 IPR013126 Heat shock protein 70 family CS348_20305 IPR012725 Chaperone DnaK CS348_20305 IPR018181 Heat shock protein 70, conserved site CS348_20305 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CS348_20310 IPR020240 Uncharacterised protein family UPF0412, YaaI CS348_20315 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 CS348_20315 IPR025217 Domain of unknown function DUF3944 CS348_20320 IPR000791 Acetate transporter GPR1/FUN34/SatP family CS348_20325 IPR001453 MoaB/Mog domain CS348_20325 IPR008284 Molybdenum cofactor biosynthesis, conserved site CS348_20325 IPR036425 MoaB/Mog-like domain superfamily CS348_20330 IPR018225 Transaldolase, active site CS348_20330 IPR004730 Transaldolase type 1 CS348_20330 IPR013785 Aldolase-type TIM barrel CS348_20330 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CS348_20335 IPR001463 Sodium:alanine symporter CS348_20340 IPR005583 Peroxide stress protein YaaA CS348_20345 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CS348_20345 IPR004450 Threonine synthase-like CS348_20345 IPR037158 Threonine synthase, N-terminal domain superfamily CS348_20345 IPR029144 Threonine synthase, N-terminal CS348_20345 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CS348_20345 IPR001926 Pyridoxal-phosphate dependent enzyme CS348_20350 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_20350 IPR013750 GHMP kinase, C-terminal domain CS348_20350 IPR036554 GHMP kinase, C-terminal domain superfamily CS348_20350 IPR006204 GHMP kinase N-terminal domain CS348_20350 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_20350 IPR006203 GHMP kinase, ATP-binding, conserved site CS348_20350 IPR000870 Homoserine kinase CS348_20355 IPR001342 Homoserine dehydrogenase, catalytic CS348_20355 IPR036393 Acetylglutamate kinase-like superfamily CS348_20355 IPR002912 ACT domain CS348_20355 IPR019811 Homoserine dehydrogenase, conserved site CS348_20355 IPR027795 CASTOR, ACT domain CS348_20355 IPR036291 NAD(P)-binding domain superfamily CS348_20355 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CS348_20355 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain CS348_20355 IPR001048 Aspartate/glutamate/uridylate kinase CS348_20355 IPR018042 Aspartate kinase, conserved site CS348_20355 IPR001341 Aspartate kinase CS348_20355 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CS348_20360 IPR011720 Thr operon leader peptide CS348_20365 IPR029028 Alpha/beta knot methyltransferases CS348_20365 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CS348_20365 IPR001537 tRNA/rRNA methyltransferase, SpoU type CS348_20365 IPR004384 RNA methyltransferase TrmJ/LasT CS348_20375 IPR016032 Signal transduction response regulator, C-terminal effector CS348_20375 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_20375 IPR011006 CheY-like superfamily CS348_20375 IPR001789 Signal transduction response regulator, receiver domain CS348_20375 IPR039420 Transcriptional regulatory protein WalR-like CS348_20375 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_20385 IPR000595 Cyclic nucleotide-binding domain CS348_20385 IPR018490 Cyclic nucleotide-binding-like CS348_20385 IPR041687 IprA, winged helix-turn-helix domain CS348_20385 IPR034719 Inhibitor of hydrogen peroxide resistance CS348_20395 IPR016147 Pili assembly chaperone, N-terminal CS348_20395 IPR018046 Pili assembly chaperone, conserved site CS348_20395 IPR001829 Pili assembly chaperone, bacterial CS348_20395 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_20395 IPR008962 PapD-like superfamily CS348_20395 IPR013783 Immunoglobulin-like fold CS348_20395 IPR016148 Pili assembly chaperone, C-terminal CS348_20415 IPR010364 Uncharacterised protein family, inner membrane CreD CS348_20420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_20420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_20420 IPR005467 Histidine kinase domain CS348_20420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_20420 IPR029151 Periplasmic sensor-like domain superfamily CS348_20420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_20420 IPR003594 Histidine kinase/HSP90-like ATPase CS348_20420 IPR003660 HAMP domain CS348_20425 IPR011006 CheY-like superfamily CS348_20425 IPR039420 Transcriptional regulatory protein WalR-like CS348_20425 IPR001789 Signal transduction response regulator, receiver domain CS348_20425 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_20425 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_20425 IPR016032 Signal transduction response regulator, C-terminal effector CS348_20430 IPR010292 Uncharacterised protein family CreA CS348_20435 IPR018062 HTH domain AraC-type, conserved site CS348_20435 IPR018060 DNA binding HTH domain, AraC-type CS348_20435 IPR009057 Homeobox-like domain superfamily CS348_20435 IPR029442 GyrI-like small molecule binding domain CS348_20435 IPR011256 Regulatory factor, effector binding domain superfamily CS348_20435 IPR010499 Bacterial transcription activator, effector binding CS348_20435 IPR020449 Transcription regulator HTH, AraC- type CS348_20440 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CS348_20440 IPR029033 Histidine phosphatase superfamily CS348_20440 IPR023086 Phosphoglycerate mutase, GpmB, probable CS348_20440 IPR013078 Histidine phosphatase superfamily, clade-1 CS348_20445 IPR029001 Inosine triphosphate pyrophosphatase-like CS348_20445 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 CS348_20445 IPR002786 Inosine/xanthosine triphosphatase CS348_20450 IPR038116 TrpR-like superfamily CS348_20450 IPR010921 Trp repressor/replication initiator CS348_20450 IPR013335 Trp repressor, bacterial CS348_20450 IPR000831 Trp repressor CS348_20455 IPR000189 Prokaryotic transglycosylase, active site CS348_20455 IPR008939 Lytic transglycosylase, superhelical U-shaped CS348_20455 IPR023346 Lysozyme-like domain superfamily CS348_20455 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily CS348_20455 IPR012289 Lytic transglycosylase, superhelical linker CS348_20455 IPR008258 Transglycosylase SLT domain 1 CS348_20465 IPR003439 ABC transporter-like CS348_20465 IPR032781 ABC-transporter extension domain CS348_20465 IPR003593 AAA+ ATPase domain CS348_20465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_20465 IPR022374 Energy-dependent translational throttle protein EttA CS348_20465 IPR017871 ABC transporter, conserved site CS348_20470 IPR038727 NadR/Ttd14, AAA domain CS348_20470 IPR001387 Cro/C1-type helix-turn-helix domain CS348_20470 IPR006417 Nicotinamide-nucleotide adenylyltransferase CS348_20470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_20470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_20470 IPR016429 NAD biosynthesis/regulator protein NadR CS348_20470 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_20470 IPR004821 Cytidyltransferase-like domain CS348_20470 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain CS348_20475 IPR003593 AAA+ ATPase domain CS348_20475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_20475 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CS348_20475 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_20475 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_20475 IPR041166 LapB, rubredoxin metal binding domain CS348_20475 IPR004504 DNA repair protein RadA CS348_20480 IPR023190 Phosphoserine phosphatase, domain 2 CS348_20480 IPR036412 HAD-like superfamily CS348_20480 IPR023214 HAD superfamily CS348_20480 IPR041449 Phosphoserine phosphatase, N-terminal CS348_20490 IPR019305 Uncharacterised protein family Smp CS348_20495 IPR004562 Lipoyltransferase/lipoate-protein ligase CS348_20495 IPR019491 Lipoate protein ligase, C-terminal CS348_20495 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CS348_20495 IPR023741 Lipoate-protein ligase A CS348_20505 IPR010546 Protein of unknown function DUF1120 CS348_20510 IPR013783 Immunoglobulin-like fold CS348_20510 IPR016147 Pili assembly chaperone, N-terminal CS348_20510 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_20510 IPR008962 PapD-like superfamily CS348_20520 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CS348_20630 IPR006528 Phage head morphogenesis domain CS348_20640 IPR012036 Bacteriophage Mu, Gp28 CS348_20640 IPR004921 Terminase large subunit, T4likevirus-type CS348_20720 IPR002477 Peptidoglycan binding-like CS348_20720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_20720 IPR003593 AAA+ ATPase domain CS348_20720 IPR036365 PGBD-like superfamily CS348_20720 IPR036366 PGBD superfamily CS348_20770 IPR014875 Mor transcription activator CS348_20770 IPR009057 Homeobox-like domain superfamily CS348_20785 IPR000845 Nucleoside phosphorylase domain CS348_20785 IPR035994 Nucleoside phosphorylase superfamily CS348_20785 IPR018016 Nucleoside phosphorylase, conserved site CS348_20785 IPR004402 Purine nucleoside phosphorylase DeoD-type CS348_20790 IPR010045 Phosphopentomutase CS348_20790 IPR017850 Alkaline-phosphatase-like, core domain superfamily CS348_20790 IPR006124 Metalloenzyme CS348_20790 IPR024052 Phosphopentomutase DeoB cap domain superfamily CS348_20795 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily CS348_20795 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CS348_20795 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site CS348_20795 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic CS348_20795 IPR000312 Glycosyl transferase, family 3 CS348_20795 IPR013465 Thymidine phosphorylase CS348_20795 IPR017459 Glycosyl transferase family 3, N-terminal domain CS348_20795 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase CS348_20795 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CS348_20795 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal CS348_20800 IPR002915 DeoC/FbaB/ lacD aldolase CS348_20800 IPR011343 Deoxyribose-phosphate aldolase CS348_20800 IPR013785 Aldolase-type TIM barrel CS348_20800 IPR023649 Deoxyribose-phosphate aldolase type II CS348_20805 IPR016905 Glycyl radical enzyme, HI0521, predicted CS348_20810 IPR007197 Radical SAM CS348_20810 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW CS348_20810 IPR001989 Radical-activating enzyme, conserved site CS348_20810 IPR012839 Organic radical enzyme activase CS348_20810 IPR034457 Organic radical-activating enzymes CS348_20810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_20810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_20810 IPR013785 Aldolase-type TIM barrel CS348_20815 IPR001130 TatD family CS348_20815 IPR032466 Metal-dependent hydrolase CS348_20815 IPR018228 Deoxyribonuclease, TatD-related, conserved site CS348_20820 IPR037483 YjjU-like CS348_20820 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CS348_20820 IPR002641 Patatin-like phospholipase domain CS348_20825 IPR009760 Protein of unknown function DUF1328 CS348_20830 IPR014004 Transport-associated and nodulation domain, bacteria CS348_20830 IPR007055 BON domain CS348_20835 IPR009000 Translation protein, beta-barrel domain superfamily CS348_20835 IPR004548 Peptide chain release factor 3 CS348_20835 IPR035647 EF-G domain III/V-like CS348_20835 IPR032090 Peptide chain release factor 3, C-terminal CS348_20835 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CS348_20835 IPR041732 Peptide chain release factor 3, GTP-binding domain CS348_20835 IPR004161 Translation elongation factor EFTu-like, domain 2 CS348_20835 IPR005225 Small GTP-binding protein domain CS348_20835 IPR000795 Transcription factor, GTP-binding domain CS348_20835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_20835 IPR031157 Tr-type G domain, conserved site CS348_20840 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CS348_20840 IPR023214 HAD superfamily CS348_20840 IPR041492 Haloacid dehalogenase-like hydrolase CS348_20840 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB CS348_20840 IPR006439 HAD hydrolase, subfamily IA CS348_20840 IPR036412 HAD-like superfamily CS348_20845 IPR000182 GNAT domain CS348_20845 IPR016181 Acyl-CoA N-acyltransferase CS348_20845 IPR006464 N-acetyltransferase RimI/Ard1 CS348_20850 IPR004615 DNA polymerase III, psi subunit CS348_20850 IPR036654 DNA polymerase III, psi subunit superfamily CS348_20850 IPR018382 DNA polymerase III, psi subunit, subgroup CS348_20855 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_20855 IPR013675 Methyltransferase small, N-terminal CS348_20855 IPR023543 rRNA small subunit methyltransferase C CS348_20855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_20855 IPR007848 Methyltransferase small domain CS348_20875 IPR009885 Protein of unknown function DUF1435 CS348_20880 IPR029787 Nucleotide cyclase CS348_20880 IPR007894 MASE2 CS348_20880 IPR000160 GGDEF domain CS348_20885 IPR008090 Ferric iron reductase CS348_20885 IPR022770 Ferric iron reductase FhuF domain CS348_20885 IPR024726 Ferric iron reductase, C-terminal CS348_20890 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CS348_20890 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CS348_20895 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_20895 IPR016032 Signal transduction response regulator, C-terminal effector CS348_20895 IPR000792 Transcription regulator LuxR, C-terminal CS348_20900 IPR000792 Transcription regulator LuxR, C-terminal CS348_20900 IPR016032 Signal transduction response regulator, C-terminal effector CS348_20905 IPR010619 Putative threonine/serine exporter CS348_20910 IPR020914 Uncharacterised protein family UPF0442 CS348_20910 IPR024528 Threonine/Serine exporter, ThrE CS348_20915 IPR040480 DnaT, DNA-binding domain CS348_20915 IPR020917 Primosomal protein 1 CS348_20920 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CS348_20920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_20920 IPR002611 IstB-like ATP-binding protein CS348_20920 IPR003593 AAA+ ATPase domain CS348_20925 IPR019637 Protein of unknown function DUF2501 CS348_20930 IPR020881 Phosphoglycerol transferase I CS348_20930 IPR017850 Alkaline-phosphatase-like, core domain superfamily CS348_20930 IPR000917 Sulfatase, N-terminal CS348_20935 IPR035466 GlmS/AgaS, SIS domain 1 CS348_20935 IPR035490 GlmS/FrlB, SIS domain 2 CS348_20935 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CS348_20935 IPR029055 Nucleophile aminohydrolases, N-terminal CS348_20935 IPR017932 Glutamine amidotransferase type 2 domain CS348_20935 IPR001347 Sugar isomerase (SIS) CS348_20940 IPR035466 GlmS/AgaS, SIS domain 1 CS348_20940 IPR001347 Sugar isomerase (SIS) CS348_20940 IPR029055 Nucleophile aminohydrolases, N-terminal CS348_20940 IPR035490 GlmS/FrlB, SIS domain 2 CS348_20940 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CS348_20940 IPR017932 Glutamine amidotransferase type 2 domain CS348_20945 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CS348_20950 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit CS348_20955 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily CS348_20955 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CS348_20955 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CS348_20965 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_20965 IPR011608 PRD domain CS348_20965 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CS348_20965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_20965 IPR036634 PRD domain superfamily CS348_20965 IPR003593 AAA+ ATPase domain CS348_20965 IPR004701 Phosphotransferase system, mannose-type IIA component CS348_20970 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CS348_20970 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CS348_20970 IPR004090 Chemotaxis methyl-accepting receptor CS348_20970 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CS348_20970 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CS348_20970 IPR003660 HAMP domain CS348_20975 IPR025299 CstA, C-terminal domain CS348_20975 IPR003706 CstA, N-terminal domain CS348_20980 IPR007423 Selenoprotein, putative CS348_20985 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CS348_20985 IPR036627 CobW-like, C-terminal domain superfamily CS348_20985 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CS348_20985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_20990 IPR020449 Transcription regulator HTH, AraC- type CS348_20990 IPR018062 HTH domain AraC-type, conserved site CS348_20990 IPR003313 AraC-type arabinose-binding/dimerisation domain CS348_20990 IPR018060 DNA binding HTH domain, AraC-type CS348_20990 IPR009057 Homeobox-like domain superfamily CS348_20990 IPR037923 Transcription regulator HTH-like CS348_20995 IPR001123 Amino acid exporter protein, LeuE-type CS348_20995 IPR004778 Homoserine/Threonine efflux protein CS348_21015 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_21015 IPR016161 Aldehyde/histidinol dehydrogenase CS348_21015 IPR016160 Aldehyde dehydrogenase, cysteine active site CS348_21015 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_21015 IPR015590 Aldehyde dehydrogenase domain CS348_21020 IPR010106 Recombination-promoting nuclease RpnA CS348_21020 IPR006842 Transposase (putative), YhgA-like CS348_21025 IPR036259 MFS transporter superfamily CS348_21025 IPR020846 Major facilitator superfamily domain CS348_21025 IPR011701 Major facilitator superfamily CS348_21025 IPR005829 Sugar transporter, conserved site CS348_21030 IPR007383 Protein of unknown function DUF445 CS348_21035 IPR036259 MFS transporter superfamily CS348_21035 IPR010645 Uncharacterised MFS-type transporter YbfB CS348_21040 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CS348_21045 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CS348_21050 IPR010229 Peptidase M38, beta-aspartyl dipeptidase CS348_21050 IPR032466 Metal-dependent hydrolase CS348_21050 IPR033826 Isoaspartyl-dipeptidase CS348_21050 IPR011059 Metal-dependent hydrolase, composite domain superfamily CS348_21050 IPR006680 Amidohydrolase-related CS348_21055 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_21055 IPR036390 Winged helix DNA-binding domain superfamily CS348_21055 IPR000847 Transcription regulator HTH, LysR CS348_21055 IPR005119 LysR, substrate-binding CS348_21060 IPR001920 Asp/Glu racemase CS348_21060 IPR004380 Aspartate racemase CS348_21060 IPR015942 Asp/Glu/hydantoin racemase CS348_21060 IPR033134 Asp/Glu racemase, active site 2 CS348_21075 IPR024109 Tryptophan-tRNA ligase, bacterial-type CS348_21075 IPR002305 Aminoacyl-tRNA synthetase, class Ic CS348_21075 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CS348_21075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_21075 IPR002306 Tryptophan-tRNA ligase CS348_21080 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_21080 IPR011711 GntR, C-terminal CS348_21080 IPR008920 Transcription regulator FadR/GntR, C-terminal CS348_21080 IPR000524 Transcription regulator HTH, GntR CS348_21080 IPR036390 Winged helix DNA-binding domain superfamily CS348_21090 IPR002925 Dienelactone hydrolase CS348_21090 IPR029058 Alpha/Beta hydrolase fold CS348_21095 IPR003691 Putative fluoride ion transporter CrcB CS348_21095 IPR005180 Domain of unknown function DUF302 CS348_21095 IPR035923 TT1751-like domain superfamily CS348_21115 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CS348_21120 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type CS348_21120 IPR025714 Methyltransferase domain CS348_21120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_21130 IPR026562 Probable transcriptional regulatory protein YeeN CS348_21130 IPR029072 YebC-like CS348_21130 IPR026564 Transcriptional regulator TACO1-like, domain 3 CS348_21130 IPR002876 Transcriptional regulator TACO1-like CS348_21130 IPR017856 Integrase-like, N-terminal CS348_21145 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CS348_21145 IPR018117 DNA methylase, C-5 cytosine-specific, active site CS348_21145 IPR010093 SinI-like, DNA-binding domain CS348_21145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_21145 IPR001525 C-5 cytosine methyltransferase CS348_21145 IPR041657 Helix-turn-helix domain, group 17 CS348_21150 IPR019070 Type II restriction endonuclease SinI CS348_21165 IPR011032 GroES-like superfamily CS348_21165 IPR036291 NAD(P)-binding domain superfamily CS348_21165 IPR013154 Alcohol dehydrogenase, N-terminal CS348_21165 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CS348_21165 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CS348_21165 IPR020843 Polyketide synthase, enoylreductase domain CS348_21165 IPR013149 Alcohol dehydrogenase, C-terminal CS348_21170 IPR031322 Shikimate kinase/gluconokinase CS348_21170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_21170 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CS348_21175 IPR036291 NAD(P)-binding domain superfamily CS348_21175 IPR011032 GroES-like superfamily CS348_21175 IPR013149 Alcohol dehydrogenase, C-terminal CS348_21175 IPR013154 Alcohol dehydrogenase, N-terminal CS348_21180 IPR020904 Short-chain dehydrogenase/reductase, conserved site CS348_21180 IPR036291 NAD(P)-binding domain superfamily CS348_21180 IPR002347 Short-chain dehydrogenase/reductase SDR CS348_21185 IPR003474 Gluconate transporter CS348_21190 IPR000843 LacI-type HTH domain CS348_21190 IPR028082 Periplasmic binding protein-like I CS348_21190 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_21195 IPR005495 Permease LptG/LptF-related CS348_21195 IPR030923 LPS export ABC transporter permease LptG CS348_21200 IPR030922 LPS export ABC transporter permease LptF CS348_21200 IPR005495 Permease LptG/LptF-related CS348_21215 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CS348_21215 IPR023042 Peptidase M17, leucine aminopeptidase CS348_21215 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CS348_21215 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CS348_21220 IPR007459 DNA polymerase III chi subunit, HolC CS348_21220 IPR036768 DNA polymerase III subunit chi superfamily CS348_21225 IPR002303 Valine-tRNA ligase CS348_21225 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CS348_21225 IPR002300 Aminoacyl-tRNA synthetase, class Ia CS348_21225 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CS348_21225 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CS348_21225 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CS348_21225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_21225 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CS348_21225 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CS348_21225 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CS348_21225 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CS348_21230 IPR010295 Protein of unknown function DUF898 CS348_21235 IPR000182 GNAT domain CS348_21235 IPR016181 Acyl-CoA N-acyltransferase CS348_21240 IPR022061 Protein of unknown function DUF3617 CS348_21245 IPR010386 tRNA-hydroxylase MiaE CS348_21245 IPR009078 Ferritin-like superfamily CS348_21245 IPR012347 Ferritin-like CS348_21250 IPR036701 RraB-like superfamily CS348_21250 IPR016716 Regulator of ribonuclease activity B CS348_21250 IPR009671 Regulator of ribonuclease activity B domain CS348_21255 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CS348_21255 IPR006130 Aspartate/ornithine carbamoyltransferase CS348_21255 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CS348_21255 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CS348_21255 IPR002292 Ornithine/putrescine carbamoyltransferase CS348_21255 IPR024904 Ornithine carbamoyltransferase CS348_21260 IPR037012 YhcH/YjgK/YiaL superfamily CS348_21260 IPR004375 YhcH/YjgK/YiaL family CS348_21270 IPR003876 Arginine deiminase CS348_21275 IPR036393 Acetylglutamate kinase-like superfamily CS348_21275 IPR001048 Aspartate/glutamate/uridylate kinase CS348_21275 IPR003964 Carbamate kinase CS348_21280 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CS348_21280 IPR006130 Aspartate/ornithine carbamoyltransferase CS348_21280 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CS348_21280 IPR024904 Ornithine carbamoyltransferase CS348_21280 IPR002292 Ornithine/putrescine carbamoyltransferase CS348_21280 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CS348_21285 IPR018385 C4-dicarboxylate anaerobic carrier-like CS348_21290 IPR036390 Winged helix DNA-binding domain superfamily CS348_21290 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_21290 IPR020900 Arginine repressor, DNA-binding domain CS348_21290 IPR036251 Arginine repressor, C-terminal domain superfamily CS348_21290 IPR020899 Arginine repressor, C-terminal CS348_21290 IPR001669 Arginine repressor CS348_21300 IPR012602 PyrBI operon leader peptide CS348_21305 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CS348_21305 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CS348_21305 IPR006130 Aspartate/ornithine carbamoyltransferase CS348_21305 IPR002082 Aspartate carbamoyltransferase CS348_21305 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CS348_21310 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CS348_21310 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CS348_21310 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily CS348_21310 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily CS348_21310 IPR002801 Aspartate transcarbamylase regulatory subunit CS348_21315 IPR006175 YjgF/YER057c/UK114 family CS348_21315 IPR035959 RutC-like superfamily CS348_21315 IPR019897 RidA, conserved site CS348_21315 IPR006056 RidA family CS348_21325 IPR018303 P-type ATPase, phosphorylation site CS348_21325 IPR023298 P-type ATPase, transmembrane domain superfamily CS348_21325 IPR008250 P-type ATPase, A domain superfamily CS348_21325 IPR023214 HAD superfamily CS348_21325 IPR023299 P-type ATPase, cytoplasmic domain N CS348_21325 IPR006415 P-type ATPase, subfamily IIIB CS348_21325 IPR001757 P-type ATPase CS348_21325 IPR006068 Cation-transporting P-type ATPase, C-terminal CS348_21325 IPR036412 HAD-like superfamily CS348_21325 IPR004014 Cation-transporting P-type ATPase, N-terminal CS348_21330 IPR000843 LacI-type HTH domain CS348_21330 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_21330 IPR028082 Periplasmic binding protein-like I CS348_21330 IPR012771 Trehalose operon repressor CS348_21335 IPR011296 Phosphotransferase system, trehalose-specific IIBC component CS348_21335 IPR001996 Phosphotransferase system, IIB component, type 1 CS348_21335 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CS348_21335 IPR013013 Phosphotransferase system, EIIC component, type 1 CS348_21335 IPR003352 Phosphotransferase system, EIIC CS348_21335 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CS348_21335 IPR036878 Glucose permease domain IIB CS348_21340 IPR012769 Trehalose-6-phosphate hydrolase CS348_21340 IPR017853 Glycoside hydrolase superfamily CS348_21340 IPR013780 Glycosyl hydrolase, all-beta CS348_21340 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CS348_21340 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CS348_21345 IPR001150 Glycine radical domain CS348_21345 IPR005144 ATP-cone domain CS348_21345 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CS348_21345 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic CS348_21350 IPR034457 Organic radical-activating enzymes CS348_21350 IPR001989 Radical-activating enzyme, conserved site CS348_21350 IPR013785 Aldolase-type TIM barrel CS348_21350 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic CS348_21355 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CS348_21355 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily CS348_21360 IPR007337 RelB antitoxin/Antitoxin DinJ CS348_21360 IPR013321 Arc-type ribbon-helix-helix CS348_21365 IPR036095 PTS system IIB component-like superfamily CS348_21365 IPR002178 PTS EIIA type-2 domain CS348_21365 IPR016152 Phosphotransferase/anion transporter CS348_21365 IPR036634 PRD domain superfamily CS348_21365 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_21365 IPR013196 Helix-turn-helix, type 11 CS348_21365 IPR007737 Mga helix-turn-helix domain CS348_21365 IPR013011 Phosphotransferase system, EIIB component, type 2 CS348_21365 IPR011608 PRD domain CS348_21365 IPR036390 Winged helix DNA-binding domain superfamily CS348_21370 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase CS348_21370 IPR013785 Aldolase-type TIM barrel CS348_21375 IPR018319 L-seryl-tRNA selenium transferase-like CS348_21375 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_21375 IPR015424 Pyridoxal phosphate-dependent transferase CS348_21375 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like CS348_21380 IPR032466 Metal-dependent hydrolase CS348_21380 IPR011059 Metal-dependent hydrolase, composite domain superfamily CS348_21380 IPR020043 Deacetylase Atu3266-like CS348_21380 IPR006680 Amidohydrolase-related CS348_21410 IPR010980 Cytochrome c/b562 CS348_21410 IPR009155 Cytochrome b562 CS348_21415 IPR035068 Metalloprotease TldD/PmbA, N-terminal CS348_21415 IPR036059 Metalloprotease TldD/PmbA superfamily CS348_21415 IPR002510 Metalloprotease TldD/PmbA CS348_21420 IPR006839 Ribosome-associated, YjgA CS348_21420 IPR023153 PSPTO4464-like domain superfamily CS348_21425 IPR013022 Xylose isomerase-like, TIM barrel domain CS348_21425 IPR036237 Xylose isomerase-like superfamily CS348_21435 IPR004748 Polyol permease CS348_21435 IPR036259 MFS transporter superfamily CS348_21435 IPR020846 Major facilitator superfamily domain CS348_21435 IPR011701 Major facilitator superfamily CS348_21440 IPR004104 Oxidoreductase, C-terminal CS348_21440 IPR036291 NAD(P)-binding domain superfamily CS348_21440 IPR000683 Oxidoreductase, N-terminal CS348_21440 IPR030827 Inositol 2-dehydrogenase CS348_21445 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CS348_21445 IPR012000 Thiamine pyrophosphate enzyme, central domain CS348_21445 IPR029061 Thiamin diphosphate-binding fold CS348_21445 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes CS348_21445 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase CS348_21445 IPR029035 DHS-like NAD/FAD-binding domain superfamily CS348_21445 IPR000399 TPP-binding enzyme, conserved site CS348_21445 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CS348_21450 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_21450 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes CS348_21450 IPR030830 5-Dehydro-2-deoxygluconokinase CS348_21450 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily CS348_21450 IPR011611 Carbohydrate kinase PfkB CS348_21450 IPR029056 Ribokinase-like CS348_21455 IPR011701 Major facilitator superfamily CS348_21455 IPR037541 Uncharacterized MFS-type transporter YfcJ CS348_21455 IPR020846 Major facilitator superfamily domain CS348_21455 IPR036259 MFS transporter superfamily CS348_21460 IPR036237 Xylose isomerase-like superfamily CS348_21460 IPR013022 Xylose isomerase-like, TIM barrel domain CS348_21465 IPR013780 Glycosyl hydrolase, all-beta CS348_21465 IPR017853 Glycoside hydrolase superfamily CS348_21465 IPR001139 Glycoside hydrolase family 30 CS348_21465 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain CS348_21470 IPR036291 NAD(P)-binding domain superfamily CS348_21470 IPR004104 Oxidoreductase, C-terminal CS348_21470 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase CS348_21470 IPR000683 Oxidoreductase, N-terminal CS348_21475 IPR013022 Xylose isomerase-like, TIM barrel domain CS348_21475 IPR036237 Xylose isomerase-like superfamily CS348_21475 IPR030823 IolE/MocC family CS348_21475 IPR023952 Inosose dehydratase CS348_21490 IPR015590 Aldehyde dehydrogenase domain CS348_21490 IPR016160 Aldehyde dehydrogenase, cysteine active site CS348_21490 IPR016163 Aldehyde dehydrogenase, C-terminal CS348_21490 IPR016161 Aldehyde/histidinol dehydrogenase CS348_21490 IPR010061 Methylmalonate-semialdehyde dehydrogenase CS348_21490 IPR016162 Aldehyde dehydrogenase, N-terminal CS348_21495 IPR021120 KduI/IolB isomerase CS348_21495 IPR023770 5-deoxy-glucuronate isomerase, Bacilli CS348_21495 IPR014710 RmlC-like jelly roll fold CS348_21495 IPR024203 5-deoxy-glucuronate isomerase, IolB CS348_21495 IPR011051 RmlC-like cupin domain superfamily CS348_21500 IPR036259 MFS transporter superfamily CS348_21500 IPR003663 Sugar/inositol transporter CS348_21500 IPR005828 Major facilitator, sugar transporter-like CS348_21500 IPR020846 Major facilitator superfamily domain CS348_21500 IPR005829 Sugar transporter, conserved site CS348_21510 IPR005828 Major facilitator, sugar transporter-like CS348_21510 IPR005829 Sugar transporter, conserved site CS348_21510 IPR003663 Sugar/inositol transporter CS348_21510 IPR036259 MFS transporter superfamily CS348_21510 IPR020846 Major facilitator superfamily domain CS348_21515 IPR001347 Sugar isomerase (SIS) CS348_21515 IPR035472 RpiR-like, SIS domain CS348_21515 IPR003836 Glucokinase CS348_21515 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_21515 IPR009057 Homeobox-like domain superfamily CS348_21515 IPR000281 Helix-turn-helix protein RpiR CS348_21525 IPR005757 Murein peptide ligase CS348_21525 IPR004101 Mur ligase, C-terminal CS348_21525 IPR036615 Mur ligase, C-terminal domain superfamily CS348_21525 IPR013221 Mur ligase, central CS348_21525 IPR000713 Mur ligase, N-terminal catalytic domain CS348_21525 IPR036565 Mur-like, catalytic domain superfamily CS348_21530 IPR028343 Fructose-1,6-bisphosphatase CS348_21530 IPR020548 Fructose-1,6-bisphosphatase, active site CS348_21530 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CS348_21530 IPR000146 Fructose-1,6-bisphosphatase class 1 CS348_21535 IPR008162 Inorganic pyrophosphatase CS348_21535 IPR036649 Inorganic pyrophosphatase superfamily CS348_21540 IPR006680 Amidohydrolase-related CS348_21540 IPR032466 Metal-dependent hydrolase CS348_21540 IPR011059 Metal-dependent hydrolase, composite domain superfamily CS348_21540 IPR020043 Deacetylase Atu3266-like CS348_21545 IPR000849 Sugar phosphate transporter CS348_21545 IPR036259 MFS transporter superfamily CS348_21545 IPR020846 Major facilitator superfamily domain CS348_21545 IPR011701 Major facilitator superfamily CS348_21550 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CS348_21550 IPR039126 Gamma-glutamylaminecyclotransferase CS348_21550 IPR013024 Gamma-glutamyl cyclotransferase-like CS348_21550 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily CS348_21555 IPR007452 Translocation and assembly module TamB CS348_21560 IPR000184 Bacterial surface antigen (D15) CS348_21560 IPR010827 POTRA domain, BamA/TamA-like CS348_21560 IPR039910 Surface antigen D15-like CS348_21560 IPR034746 POTRA domain CS348_21560 IPR035243 TamA, POTRA domain 1 CS348_21565 IPR002569 Peptide methionine sulphoxide reductase MsrA CS348_21565 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CS348_21570 IPR005170 Transporter-associated domain CS348_21570 IPR016169 FAD-binding, type PCMH, subdomain 2 CS348_21570 IPR036318 FAD-binding, type PCMH-like superfamily CS348_21570 IPR002550 CNNM, transmembrane domain CS348_21570 IPR000644 CBS domain CS348_21575 IPR009491 Protein of unknown function DUF1107 CS348_21585 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CS348_21590 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ CS348_21590 IPR000760 Inositol monophosphatase-like CS348_21590 IPR020550 Inositol monophosphatase, conserved site CS348_21590 IPR020583 Inositol monophosphatase, metal-binding site CS348_21600 IPR029052 Metallo-dependent phosphatase-like CS348_21600 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CS348_21600 IPR041827 CpdB, N-terminal metallophosphatase domain CS348_21600 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CS348_21600 IPR006179 5'-Nucleotidase/apyrase CS348_21600 IPR006146 5'-Nucleotidase, conserved site CS348_21600 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CS348_21600 IPR008334 5'-Nucleotidase, C-terminal CS348_21605 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_21605 IPR036390 Winged helix DNA-binding domain superfamily CS348_21605 IPR002577 Helix-turn-helix, HxlR type CS348_21610 IPR008030 NmrA-like domain CS348_21610 IPR036291 NAD(P)-binding domain superfamily CS348_21615 IPR000620 EamA domain CS348_21620 IPR019903 Repair of iron centres family CS348_21620 IPR012312 Haemerythrin-like CS348_21620 IPR023742 Iron-sulfur cluster repair protein YftE CS348_21625 IPR004840 Amino acid permease, conserved site CS348_21625 IPR004841 Amino acid permease/ SLC12A domain CS348_21630 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily CS348_21630 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CS348_21630 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal CS348_21635 IPR007340 Opacity-associated protein A CS348_21635 IPR013731 Opacity-associated protein A, N-terminal CS348_21645 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CS348_21645 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CS348_21645 IPR020070 Ribosomal protein L9, N-terminal CS348_21645 IPR020069 Ribosomal protein L9, C-terminal CS348_21645 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CS348_21645 IPR000244 Ribosomal protein L9 CS348_21645 IPR020594 Ribosomal protein L9, bacteria/chloroplast CS348_21650 IPR036870 Ribosomal protein S18 superfamily CS348_21650 IPR018275 Ribosomal protein S18, conserved site CS348_21650 IPR001648 Ribosomal protein S18 CS348_21655 IPR012340 Nucleic acid-binding, OB-fold CS348_21655 IPR000424 Primosome PriB/single-strand DNA-binding CS348_21655 IPR023646 Primosomal replication protein PriB CS348_21660 IPR000529 Ribosomal protein S6 CS348_21660 IPR020815 Ribosomal protein S6, conserved site CS348_21660 IPR020814 Ribosomal protein S6, plastid/chloroplast CS348_21660 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CS348_21660 IPR035980 Ribosomal protein S6 superfamily CS348_21670 IPR025543 Dodecin-like CS348_21670 IPR010854 Domain of unknown function DUF1471 CS348_21670 IPR036275 YdgH-like superfamily CS348_21675 IPR009898 Protein of unknown function DUF1440 CS348_21680 IPR001303 Class II aldolase/adducin N-terminal CS348_21680 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF CS348_21680 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CS348_21685 IPR004560 L-ribulose-5-phosphate 3-epimerase CS348_21685 IPR036237 Xylose isomerase-like superfamily CS348_21685 IPR013022 Xylose isomerase-like, TIM barrel domain CS348_21685 IPR023492 L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae CS348_21690 IPR041710 HPS/KGPDC domain CS348_21690 IPR001754 Orotidine 5'-phosphate decarboxylase domain CS348_21690 IPR013785 Aldolase-type TIM barrel CS348_21690 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD CS348_21690 IPR011060 Ribulose-phosphate binding barrel CS348_21695 IPR002178 PTS EIIA type-2 domain CS348_21695 IPR016152 Phosphotransferase/anion transporter CS348_21700 IPR036095 PTS system IIB component-like superfamily CS348_21700 IPR013011 Phosphotransferase system, EIIB component, type 2 CS348_21700 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CS348_21705 IPR004703 Phosphotransferase system, sugar-specific permease component CS348_21710 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CS348_21710 IPR023951 L-ascorbate-6-phosphate lactonase UlaG CS348_21715 IPR001034 DeoR-type HTH domain CS348_21715 IPR014036 DeoR C-terminal sensor domain CS348_21715 IPR023711 Transcription regulator HTH, UlaR CS348_21715 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_21715 IPR036390 Winged helix DNA-binding domain superfamily CS348_21715 IPR037171 NagB/RpiA transferase-like CS348_21720 IPR029058 Alpha/Beta hydrolase fold CS348_21720 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CS348_21725 IPR025543 Dodecin-like CS348_21725 IPR010854 Domain of unknown function DUF1471 CS348_21725 IPR036275 YdgH-like superfamily CS348_21730 IPR025543 Dodecin-like CS348_21730 IPR036275 YdgH-like superfamily CS348_21730 IPR010854 Domain of unknown function DUF1471 CS348_21735 IPR041504 Adaptive response protein AidB, N-terminal CS348_21735 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CS348_21735 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CS348_21735 IPR006089 Acyl-CoA dehydrogenase, conserved site CS348_21735 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CS348_21735 IPR034184 Putative acyl-CoA dehydrogenase AidB CS348_21735 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CS348_21740 IPR016185 Pre-ATP-grasp domain superfamily CS348_21740 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CS348_21745 IPR009576 Biofilm formation YgiB CS348_21750 IPR007140 Protein of unknown function DUF350 CS348_21755 IPR019621 Protein of unknown function DUF2491 CS348_21760 IPR007157 PspA/IM30 CS348_21765 IPR019231 Protein of unknown function DUF2170 CS348_21770 IPR029064 50S ribosomal protein L30e-like CS348_21770 IPR004441 RNA methyltransferase TrmH family CS348_21770 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CS348_21770 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CS348_21770 IPR001537 tRNA/rRNA methyltransferase, SpoU type CS348_21770 IPR029028 Alpha/beta knot methyltransferases CS348_21770 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CS348_21775 IPR012340 Nucleic acid-binding, OB-fold CS348_21775 IPR013223 Ribonuclease B, N-terminal OB domain CS348_21775 IPR001900 Ribonuclease II/R CS348_21775 IPR022967 RNA-binding domain, S1 CS348_21775 IPR004476 Ribonuclease II/ribonuclease R CS348_21775 IPR011805 Ribonuclease R CS348_21775 IPR022966 Ribonuclease II/R, conserved site CS348_21775 IPR003029 S1 domain CS348_21775 IPR011129 Cold shock domain CS348_21775 IPR040476 RNase II/RNase R, cold shock domain CS348_21775 IPR013668 Ribonuclease R winged-helix domain CS348_21780 IPR000944 Transcription regulator Rrf2-type CS348_21780 IPR023761 Transcriptional repressor HTH, NsrR CS348_21780 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_21780 IPR036390 Winged helix DNA-binding domain superfamily CS348_21790 IPR001114 Adenylosuccinate synthetase CS348_21790 IPR042110 Adenylosuccinate synthetase, domain 2 CS348_21790 IPR042109 Adenylosuccinate synthetase, domain 1 CS348_21790 IPR033128 Adenylosuccinate synthase, active site CS348_21790 IPR018220 Adenylosuccinate synthase, GTP-binding site CS348_21790 IPR042111 Adenylosuccinate synthetase, domain 3 CS348_21790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_21795 IPR019201 Protein of unknown function DUF2065 CS348_21800 IPR010200 HflC CS348_21800 IPR036013 Band 7/SPFH domain superfamily CS348_21800 IPR001107 Band 7 domain CS348_21805 IPR020980 Menbrane protein HflK, N-terminal CS348_21805 IPR036013 Band 7/SPFH domain superfamily CS348_21805 IPR001107 Band 7 domain CS348_21805 IPR001972 Stomatin family CS348_21805 IPR010201 HflK CS348_21810 IPR030394 HflX-type guanine nucleotide-binding (G) domain CS348_21810 IPR016496 GTPase HflX CS348_21810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_21810 IPR042108 GTPase HflX, N-terminal domain superfamily CS348_21810 IPR032305 GTP-binding protein, middle domain CS348_21810 IPR035647 EF-G domain III/V-like CS348_21810 IPR006073 GTP binding domain CS348_21810 IPR025121 GTPase HflX, N-terminal CS348_21815 IPR010920 LSM domain superfamily CS348_21815 IPR005001 RNA-binding protein Hfq CS348_21820 IPR018022 IPP transferase CS348_21820 IPR039657 Dimethylallyltransferase CS348_21820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_21825 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_21825 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_21825 IPR037198 MutL, C-terminal domain superfamily CS348_21825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_21825 IPR042120 MutL, C-terminal domain, dimerisation subdomain CS348_21825 IPR014790 MutL, C-terminal, dimerisation CS348_21825 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CS348_21825 IPR014762 DNA mismatch repair, conserved site CS348_21825 IPR013507 DNA mismatch repair protein, S5 domain 2-like CS348_21825 IPR042121 MutL, C-terminal domain, regulatory subdomain CS348_21825 IPR020667 DNA mismatch repair protein, MutL CS348_21825 IPR002099 DNA mismatch repair protein family, N-terminal CS348_21830 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CS348_21835 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CS348_21835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_21840 IPR004443 YjeF N-terminal domain CS348_21840 IPR017953 Carbohydrate kinase, predicted, conserved site CS348_21840 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CS348_21840 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr CS348_21840 IPR029056 Ribokinase-like CS348_21840 IPR036652 YjeF N-terminal domain superfamily CS348_21845 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_21845 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_21845 IPR004453 Epoxyqueuosine reductase QueG CS348_21845 IPR013542 Domain of unknown function DUF1730 CS348_21865 IPR018313 Solute-binding protein family 3, conserved site CS348_21865 IPR001320 Ionotropic glutamate receptor CS348_21865 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter CS348_21865 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CS348_21870 IPR022894 Oligoribonuclease CS348_21870 IPR013520 Exonuclease, RNase T/DNA polymerase III CS348_21870 IPR036397 Ribonuclease H superfamily CS348_21870 IPR012337 Ribonuclease H-like superfamily CS348_21875 IPR010914 RsgA GTPase domain CS348_21875 IPR004881 Ribosome biogenesis GTPase RsgA CS348_21875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_21875 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CS348_21880 IPR003817 Phosphatidylserine decarboxylase-related CS348_21880 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 CS348_21880 IPR033177 Phosphatidylserine decarboxylase CS348_21885 IPR023408 Mechanosensitive ion channel MscS domain superfamily CS348_21885 IPR010920 LSM domain superfamily CS348_21885 IPR006685 Mechanosensitive ion channel MscS CS348_21885 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CS348_21885 IPR006686 Mechanosensitive ion channel MscS, conserved site CS348_21885 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CS348_21885 IPR011066 Mechanosensitive ion channel MscS, C-terminal CS348_21885 IPR024393 Mechanosensitive ion channel MscS, porin domain CS348_21890 IPR002293 Amino acid/polyamine transporter I CS348_21895 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CS348_21895 IPR004525 Elongation factor P--(R)-beta-lysine ligase CS348_21895 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CS348_21895 IPR006195 Aminoacyl-tRNA synthetase, class II CS348_21900 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CS348_21900 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CS348_21900 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_21900 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CS348_21900 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CS348_21900 IPR005884 Fumarate reductase, flavoprotein subunit CS348_21900 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CS348_21900 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CS348_21905 IPR009051 Alpha-helical ferredoxin CS348_21905 IPR012675 Beta-grasp domain superfamily CS348_21905 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_21905 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_21905 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CS348_21905 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CS348_21905 IPR036010 2Fe-2S ferredoxin-like superfamily CS348_21905 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CS348_21905 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CS348_21910 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CS348_21910 IPR003510 Fumarate reductase, subunit C CS348_21915 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CS348_21915 IPR003418 Fumarate reductase, subunit D CS348_21920 IPR012674 Calycin CS348_21920 IPR022271 Lipocalin, ApoD type CS348_21920 IPR002446 Lipocalin, bacterial CS348_21920 IPR022272 Lipocalin family conserved site CS348_21920 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CS348_21925 IPR000390 Small multidrug resistance protein family CS348_21930 IPR000792 Transcription regulator LuxR, C-terminal CS348_21930 IPR001789 Signal transduction response regulator, receiver domain CS348_21930 IPR016032 Signal transduction response regulator, C-terminal effector CS348_21935 IPR012556 Entericidin A/B CS348_21940 IPR012556 Entericidin A/B CS348_21945 IPR015365 Elongation factor P, C-terminal CS348_21945 IPR012340 Nucleic acid-binding, OB-fold CS348_21945 IPR014722 Ribosomal protein L2, domain 2 CS348_21945 IPR020599 Translation elongation factor P/YeiP CS348_21945 IPR013185 Translation elongation factor, KOW-like CS348_21945 IPR001059 Translation elongation factor P/YeiP, central CS348_21945 IPR013852 Translation elongation factor P/YeiP, conserved site CS348_21945 IPR011768 Translation elongation factor P CS348_21945 IPR008991 Translation protein SH3-like domain superfamily CS348_21950 IPR007197 Radical SAM CS348_21950 IPR013785 Aldolase-type TIM barrel CS348_21950 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CS348_21950 IPR022462 Lysine-2,3-aminomutase-like CS348_21955 IPR031810 YjeJ-like CS348_21960 IPR025294 Protein of unknown function DUF4156 CS348_21965 IPR002423 Chaperonin Cpn60/TCP-1 family CS348_21965 IPR027413 GroEL-like equatorial domain superfamily CS348_21965 IPR027409 GroEL-like apical domain superfamily CS348_21965 IPR018370 Chaperonin Cpn60, conserved site CS348_21965 IPR001844 Chaperonin Cpn60 CS348_21965 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CS348_21970 IPR037124 GroES chaperonin superfamily CS348_21970 IPR018369 Chaperonin GroES, conserved site CS348_21970 IPR011032 GroES-like superfamily CS348_21970 IPR020818 GroES chaperonin family CS348_21975 IPR002293 Amino acid/polyamine transporter I CS348_21980 IPR007313 FxsA cytoplasmic membrane protein CS348_21985 IPR024083 Fumarase/histidase, N-terminal CS348_21985 IPR020557 Fumarate lyase, conserved site CS348_21985 IPR022761 Fumarate lyase, N-terminal CS348_21985 IPR004708 Aspartate ammonia-lyase CS348_21985 IPR000362 Fumarate lyase family CS348_21985 IPR018951 Fumarase C, C-terminal CS348_21985 IPR008948 L-Aspartase-like CS348_21990 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CS348_21995 IPR004323 Divalent ion tolerance protein, CutA CS348_21995 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria CS348_21995 IPR011322 Nitrogen regulatory PII-like, alpha/beta CS348_21995 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CS348_22000 IPR013766 Thioredoxin domain CS348_22000 IPR017937 Thioredoxin, conserved site CS348_22000 IPR036249 Thioredoxin-like superfamily CS348_22000 IPR022910 Thiol:disulphide interchange protein DsbD CS348_22000 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CS348_22000 IPR035671 DsbD gamma CS348_22000 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CS348_22000 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CS348_22005 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CS348_22005 IPR001647 DNA-binding HTH domain, TetR-type CS348_22005 IPR009057 Homeobox-like domain superfamily CS348_22020 IPR001011 Acid phosphatase, class A, bacterial CS348_22020 IPR018296 Acid phosphatase, class A, bacterial, conserved site CS348_22020 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CS348_22020 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CS348_22025 IPR009722 SdiA-regulated CS348_22025 IPR011042 Six-bladed beta-propeller, TolB-like CS348_22050 IPR003467 Fimbrial, major/minor subunit CS348_22060 IPR035191 K88 minor fimbrial subunit FaeF CS348_22065 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_22065 IPR016147 Pili assembly chaperone, N-terminal CS348_22065 IPR018046 Pili assembly chaperone, conserved site CS348_22065 IPR013783 Immunoglobulin-like fold CS348_22065 IPR008962 PapD-like superfamily CS348_22065 IPR001829 Pili assembly chaperone, bacterial CS348_22070 IPR042186 Outer membrane usher protein FimD, plug domain CS348_22070 IPR025885 PapC, N-terminal domain CS348_22070 IPR037224 PapC, N-terminal domain superfamily CS348_22070 IPR018030 Fimbrial membrane usher, conserved site CS348_22070 IPR000015 Outer membrane usher protein CS348_22075 IPR016372 K88 fimbrial protein A CS348_22075 IPR008966 Adhesion domain superfamily CS348_22075 IPR036937 Fimbrial-type adhesion domain superfamily CS348_22080 IPR004356 Adhesin operon regulatory protein CS348_22105 IPR018060 DNA binding HTH domain, AraC-type CS348_22105 IPR009057 Homeobox-like domain superfamily CS348_22105 IPR018062 HTH domain AraC-type, conserved site CS348_22105 IPR020449 Transcription regulator HTH, AraC- type CS348_22110 IPR016032 Signal transduction response regulator, C-terminal effector CS348_22110 IPR011006 CheY-like superfamily CS348_22110 IPR030864 Transcriptional regulatory protein RcsB CS348_22110 IPR001789 Signal transduction response regulator, receiver domain CS348_22110 IPR000792 Transcription regulator LuxR, C-terminal CS348_22110 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_22120 IPR009722 SdiA-regulated CS348_22120 IPR011042 Six-bladed beta-propeller, TolB-like CS348_22130 IPR020945 DMSO/Nitrate reductase chaperone CS348_22130 IPR036411 TorD-like superfamily CS348_22130 IPR028611 Tat proofreading chaperone DmsD CS348_22130 IPR026269 Tat proofreading chaperone DmsD-type CS348_22135 IPR007059 DMSO reductase anchor subunit (DmsC) CS348_22140 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_22140 IPR014297 Dimethylsulphoxide reductase, chain B CS348_22140 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_22145 IPR006657 Molybdopterin dinucleotide-binding domain CS348_22145 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_22145 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_22145 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CS348_22145 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_22145 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_22145 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_22145 IPR006656 Molybdopterin oxidoreductase CS348_22145 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_22150 IPR039506 SpoOB, alpha-helical domain CS348_22150 IPR035965 PAS domain superfamily CS348_22150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_22150 IPR013767 PAS fold CS348_22150 IPR033463 Single cache domain 3 CS348_22150 IPR029151 Periplasmic sensor-like domain superfamily CS348_22150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_22150 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB CS348_22150 IPR003594 Histidine kinase/HSP90-like ATPase CS348_22150 IPR000014 PAS domain CS348_22150 IPR005467 Histidine kinase domain CS348_22155 IPR011006 CheY-like superfamily CS348_22155 IPR024187 Signal transduction response regulator, citrate/malate metabolism CS348_22155 IPR001789 Signal transduction response regulator, receiver domain CS348_22165 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CS348_22170 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily CS348_22170 IPR020557 Fumarate lyase, conserved site CS348_22170 IPR011167 Iron-dependent fumarate hydratase CS348_22170 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CS348_22170 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CS348_22175 IPR018043 Sodium:galactoside symporter, conserved site CS348_22175 IPR001927 Sodium:galactoside symporter CS348_22175 IPR036259 MFS transporter superfamily CS348_22175 IPR039672 Lactose permease-like CS348_22180 IPR019802 Glycoside hydrolase, family 4, conserved site CS348_22180 IPR022616 Glycosyl hydrolase, family 4, C-terminal CS348_22180 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CS348_22180 IPR036291 NAD(P)-binding domain superfamily CS348_22180 IPR001088 Glycoside hydrolase, family 4 CS348_22185 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily CS348_22185 IPR018062 HTH domain AraC-type, conserved site CS348_22185 IPR018060 DNA binding HTH domain, AraC-type CS348_22185 IPR009057 Homeobox-like domain superfamily CS348_22185 IPR020449 Transcription regulator HTH, AraC- type CS348_22185 IPR014710 RmlC-like jelly roll fold CS348_22185 IPR011051 RmlC-like cupin domain superfamily CS348_22190 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CS348_22190 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal CS348_22190 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CS348_22190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_22190 IPR015424 Pyridoxal phosphate-dependent transferase CS348_22190 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_22190 IPR000310 Orn/Lys/Arg decarboxylase, major domain CS348_22190 IPR011193 Ornithine/lysine/arginine decarboxylase CS348_22195 IPR020449 Transcription regulator HTH, AraC- type CS348_22195 IPR018062 HTH domain AraC-type, conserved site CS348_22195 IPR009057 Homeobox-like domain superfamily CS348_22195 IPR018060 DNA binding HTH domain, AraC-type CS348_22200 IPR002293 Amino acid/polyamine transporter I CS348_22205 IPR000917 Sulfatase, N-terminal CS348_22205 IPR040423 Phosphoethanolamine transferase CS348_22205 IPR012549 Phosphoethanolamine transferase, N-terminal CS348_22205 IPR017850 Alkaline-phosphatase-like, core domain superfamily CS348_22210 IPR011006 CheY-like superfamily CS348_22210 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_22210 IPR039420 Transcriptional regulatory protein WalR-like CS348_22210 IPR001789 Signal transduction response regulator, receiver domain CS348_22210 IPR016032 Signal transduction response regulator, C-terminal effector CS348_22210 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_22215 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_22215 IPR003660 HAMP domain CS348_22215 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_22215 IPR005467 Histidine kinase domain CS348_22215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_22215 IPR003594 Histidine kinase/HSP90-like ATPase CS348_22215 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_22225 IPR005829 Sugar transporter, conserved site CS348_22225 IPR036292 Proline/betaine transporter ProP, C-terminal CS348_22225 IPR015041 Osmosensory transporter coiled coil CS348_22225 IPR004736 MFS transporter, metabolite:H symporter CS348_22225 IPR036259 MFS transporter superfamily CS348_22225 IPR005828 Major facilitator, sugar transporter-like CS348_22225 IPR020846 Major facilitator superfamily domain CS348_22230 IPR013987 PhnA protein, N-terminal CS348_22230 IPR004624 PhnA protein CS348_22230 IPR013988 PhnA protein, C-terminal CS348_22235 IPR028973 PhnB-like CS348_22235 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CS348_22240 IPR000182 GNAT domain CS348_22240 IPR016181 Acyl-CoA N-acyltransferase CS348_22255 IPR006597 Sel1-like repeat CS348_22255 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_22260 IPR001991 Sodium:dicarboxylate symporter CS348_22260 IPR033380 Glutamate-aspartate symport protein GltP/GltT CS348_22260 IPR034703 Proton/glutamate-aspartate symporter GltP CS348_22260 IPR018107 Sodium:dicarboxylate symporter, conserved site CS348_22260 IPR036458 Sodium:dicarboxylate symporter superfamily CS348_22265 IPR019734 Tetratricopeptide repeat CS348_22265 IPR013026 Tetratricopeptide repeat-containing domain CS348_22265 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_22270 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF CS348_22270 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily CS348_22270 IPR005616 CcmH/CycL/Ccl2/NrfF family CS348_22275 IPR003570 Cytochrome c-type biogenesis protein NrfE CS348_22275 IPR003567 Cytochrome c-type biogenesis protein CS348_22275 IPR002541 Cytochrome c assembly protein CS348_22275 IPR003568 Cytochrome c-type biogenesis protein CcmF CS348_22275 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CS348_22280 IPR005614 NrfD family CS348_22280 IPR017566 NrfD CS348_22285 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CS348_22285 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_22285 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_22285 IPR017567 Cytochrome c nitrite reductase, Fe-S protein CS348_22285 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_22290 IPR023155 Cytochrome c-552/4 CS348_22290 IPR010177 Doubled CXXCH motif CS348_22290 IPR036280 Multiheme cytochrome superfamily CS348_22290 IPR011031 Multihaem cytochrome CS348_22290 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit CS348_22295 IPR036280 Multiheme cytochrome superfamily CS348_22295 IPR011031 Multihaem cytochrome CS348_22295 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit CS348_22295 IPR003321 Cytochrome c552 CS348_22305 IPR011904 Acetate-CoA ligase CS348_22305 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CS348_22305 IPR025110 AMP-binding enzyme, C-terminal domain CS348_22305 IPR000873 AMP-dependent synthetase/ligase CS348_22305 IPR042099 AMP-dependent synthetase-like superfamily CS348_22305 IPR020845 AMP-binding, conserved site CS348_22310 IPR007436 Protein of unknown function DUF485 CS348_22315 IPR014083 Cation/acetate symporter ActP CS348_22315 IPR001734 Sodium/solute symporter CS348_22315 IPR018212 Sodium/solute symporter, conserved site CS348_22315 IPR038377 Sodium/glucose symporter superfamily CS348_22320 IPR007300 CidB/LrgB family CS348_22320 IPR005261 Conserved hypothetical protein CHP00659 CS348_22325 IPR023760 Holin-like protein CidA CS348_22325 IPR005538 LrgA/CidA family CS348_22330 IPR036390 Winged helix DNA-binding domain superfamily CS348_22330 IPR005119 LysR, substrate-binding CS348_22330 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_22330 IPR000847 Transcription regulator HTH, LysR CS348_22335 IPR006153 Cation/H+ exchanger CS348_22335 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria CS348_22335 IPR018422 Cation/H+ exchanger, CPA1 family CS348_22335 IPR038770 Sodium/solute symporter superfamily CS348_22345 IPR006043 Xanthine/uracil/vitamin C permease CS348_22360 IPR015358 Transcription regulator MerR, DNA binding CS348_22360 IPR010211 Redox-sensitive transcriptional activator SoxR CS348_22360 IPR009061 Putative DNA-binding domain superfamily CS348_22360 IPR000551 MerR-type HTH domain CS348_22365 IPR020449 Transcription regulator HTH, AraC- type CS348_22365 IPR018062 HTH domain AraC-type, conserved site CS348_22365 IPR018060 DNA binding HTH domain, AraC-type CS348_22365 IPR009057 Homeobox-like domain superfamily CS348_22370 IPR001633 EAL domain CS348_22370 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CS348_22370 IPR035919 EAL domain superfamily CS348_22375 IPR016958 Uncharacterised conserved protein UCP030798 CS348_22380 IPR017871 ABC transporter, conserved site CS348_22380 IPR003439 ABC transporter-like CS348_22380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_22380 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_22380 IPR011917 ABC transporter, lipid A export, MsbA CS348_22380 IPR003593 AAA+ ATPase domain CS348_22380 IPR011527 ABC transporter type 1, transmembrane domain CS348_22415 IPR000424 Primosome PriB/single-strand DNA-binding CS348_22415 IPR012340 Nucleic acid-binding, OB-fold CS348_22415 IPR011344 Single-stranded DNA-binding protein CS348_22425 IPR041552 UvrA DNA-binding domain CS348_22425 IPR041102 UvrA, interaction domain CS348_22425 IPR003439 ABC transporter-like CS348_22425 IPR017871 ABC transporter, conserved site CS348_22425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_22425 IPR004602 UvrABC system subunit A CS348_22440 IPR007351 Uncharacterised protein YjbR CS348_22440 IPR038056 YjbR-like superfamily CS348_22445 IPR035917 YjbQ-like superfamily CS348_22445 IPR001602 Uncharacterised protein family UPF0047 CS348_22450 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA CS348_22450 IPR023214 HAD superfamily CS348_22450 IPR005519 Acid phosphatase, class B-like CS348_22450 IPR036412 HAD-like superfamily CS348_22455 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_22455 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_22455 IPR004839 Aminotransferase, class I/classII CS348_22455 IPR015424 Pyridoxal phosphate-dependent transferase CS348_22455 IPR000796 Aspartate/other aminotransferase CS348_22455 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CS348_22460 IPR029066 PLP-binding barrel CS348_22460 IPR001608 Alanine racemase, N-terminal CS348_22460 IPR011079 Alanine racemase, C-terminal CS348_22460 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CS348_22460 IPR000821 Alanine racemase CS348_22460 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CS348_22465 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CS348_22465 IPR007693 DNA helicase, DnaB-like, N-terminal CS348_22465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_22465 IPR007692 DNA helicase, DnaB type CS348_22465 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CS348_22465 IPR003593 AAA+ ATPase domain CS348_22465 IPR007694 DNA helicase, DnaB-like, C-terminal CS348_22470 IPR013149 Alcohol dehydrogenase, C-terminal CS348_22470 IPR013154 Alcohol dehydrogenase, N-terminal CS348_22470 IPR011032 GroES-like superfamily CS348_22470 IPR036291 NAD(P)-binding domain superfamily CS348_22470 IPR020843 Polyketide synthase, enoylreductase domain CS348_22470 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CS348_22475 IPR014318 Phage shock protein, PspG CS348_22480 IPR001269 tRNA-dihydrouridine synthase CS348_22480 IPR035587 DUS-like, FMN-binding domain CS348_22480 IPR004653 tRNA-dihydrouridine(20/20a) synthase CS348_22480 IPR013785 Aldolase-type TIM barrel CS348_22480 IPR018517 tRNA-dihydrouridine synthase, conserved site CS348_22490 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_22490 IPR002481 Ferric-uptake regulator CS348_22490 IPR036390 Winged helix DNA-binding domain superfamily CS348_22495 IPR008462 CsbD-like domain CS348_22495 IPR036629 YjbJ superfamily CS348_22495 IPR026042 Stress response protein YjbJ CS348_22505 IPR002528 Multi antimicrobial extrusion protein CS348_22510 IPR015927 Peptidase S24/S26A/S26B/S26C CS348_22510 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_22510 IPR006197 Peptidase S24, LexA-like CS348_22510 IPR006199 LexA repressor, DNA-binding domain CS348_22510 IPR036286 LexA/Signal peptidase-like superfamily CS348_22510 IPR039418 LexA-like CS348_22510 IPR006200 Transcription regulator LexA CS348_22510 IPR036390 Winged helix DNA-binding domain superfamily CS348_22515 IPR000829 DAGK family CS348_22515 IPR036945 Diacylglycerol kinase (DAGK) superfamily CS348_22515 IPR033718 Diacylglycerol kinase, prokaryotic CS348_22520 IPR002123 Phospholipid/glycerol acyltransferase CS348_22520 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase CS348_22520 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB CS348_22520 IPR041728 GPAT/DHAPAT, acyltransferase domain CS348_22525 IPR030470 UbiA prenyltransferase conserved site CS348_22525 IPR006370 4-hydroxybenzoate polyprenyltransferase-like CS348_22525 IPR039653 Prenyltransferase CS348_22525 IPR000537 UbiA prenyltransferase family CS348_22530 IPR007440 Chorismate--pyruvate lyase CS348_22530 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CS348_22535 IPR010794 Maltose operon periplasmic CS348_22540 IPR003192 Porin, LamB-type CS348_22540 IPR036998 Porin, LamB-type superfamily CS348_22540 IPR023738 Maltoporin CS348_22545 IPR008995 Molybdate/tungstate binding, C-terminal CS348_22545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_22545 IPR040582 MalK, OB fold domain CS348_22545 IPR015855 ABC transporter, maltose/maltodextrin import, MalK CS348_22545 IPR017871 ABC transporter, conserved site CS348_22545 IPR003439 ABC transporter-like CS348_22545 IPR003593 AAA+ ATPase domain CS348_22550 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein CS348_22550 IPR006059 Bacterial extracellular solute-binding protein CS348_22550 IPR006061 Solute-binding family 1, conserved site CS348_22555 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like CS348_22555 IPR035277 MalF, N-terminal CS348_22555 IPR029345 Maltose transport system permease protein MalF, P2 domain CS348_22555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_22555 IPR035906 MetI-like superfamily CS348_22560 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_22560 IPR035906 MetI-like superfamily CS348_22565 IPR020846 Major facilitator superfamily domain CS348_22565 IPR005828 Major facilitator, sugar transporter-like CS348_22565 IPR003663 Sugar/inositol transporter CS348_22565 IPR036259 MFS transporter superfamily CS348_22565 IPR005829 Sugar transporter, conserved site CS348_22570 IPR009315 Phosphate-starvation-induced PsiE CS348_22570 IPR020948 Phosphate-starvation-induced PsiE-like CS348_22575 IPR010344 Exopolysaccharide biosynthesis protein YbjH CS348_22580 IPR010425 Domain of unknown function DUF1017 CS348_22585 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB CS348_22585 IPR023373 YmcC-like superfamily CS348_22595 IPR001672 Phosphoglucose isomerase (PGI) CS348_22595 IPR018189 Phosphoglucose isomerase, conserved site CS348_22595 IPR035476 Phosphoglucose isomerase, SIS domain 1 CS348_22595 IPR035482 Phosphoglucose isomerase, SIS domain 2 CS348_22595 IPR023096 Phosphoglucose isomerase, C-terminal CS348_22600 IPR001341 Aspartate kinase CS348_22600 IPR005260 Aspartate kinase, monofunctional class CS348_22600 IPR001048 Aspartate/glutamate/uridylate kinase CS348_22600 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain CS348_22600 IPR002912 ACT domain CS348_22600 IPR036393 Acetylglutamate kinase-like superfamily CS348_22600 IPR018042 Aspartate kinase, conserved site CS348_22620 IPR023214 HAD superfamily CS348_22620 IPR006379 HAD-superfamily hydrolase, subfamily IIB CS348_22620 IPR036412 HAD-like superfamily CS348_22620 IPR000150 Cof family CS348_22625 IPR001034 DeoR-type HTH domain CS348_22625 IPR011991 ArsR-like helix-turn-helix domain CS348_22625 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_22625 IPR037171 NagB/RpiA transferase-like CS348_22625 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_22625 IPR036390 Winged helix DNA-binding domain superfamily CS348_22625 IPR014036 DeoR C-terminal sensor domain CS348_22635 IPR020317 Uncharacterised protein family YjbD CS348_22640 IPR020103 Pseudouridine synthase, catalytic domain superfamily CS348_22640 IPR006145 Pseudouridine synthase, RsuA/RluA CS348_22640 IPR002942 RNA-binding S4 domain CS348_22640 IPR036986 RNA-binding S4 domain superfamily CS348_22640 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CS348_22640 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CS348_22640 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CS348_22645 IPR018636 Protein of unknown function DUF2058 CS348_22655 IPR005320 Peptidase S51 CS348_22655 IPR023172 Peptidase S51, dipeptidase E CS348_22655 IPR029062 Class I glutamine amidotransferase-like CS348_22660 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein CS348_22660 IPR003841 Sodium-dependent phosphate transport protein CS348_22665 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CS348_22665 IPR006158 Cobalamin (vitamin B12)-binding domain CS348_22665 IPR036724 Cobalamin-binding domain superfamily CS348_22665 IPR011005 Dihydropteroate synthase-like CS348_22665 IPR003726 Homocysteine-binding domain CS348_22665 IPR036589 Homocysteine-binding domain superfamily CS348_22665 IPR011822 Cobalamin-dependent methionine synthase CS348_22665 IPR036594 Methionine synthase domain CS348_22665 IPR000489 Pterin-binding domain CS348_22665 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CS348_22665 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily CS348_22665 IPR033706 Methionine synthase, B12-binding domain CS348_22670 IPR029016 GAF-like domain superfamily CS348_22670 IPR014757 Transcription regulator IclR, C-terminal CS348_22670 IPR005471 Transcription regulator IclR, N-terminal CS348_22670 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_22670 IPR036390 Winged helix DNA-binding domain superfamily CS348_22680 IPR010452 Isocitrate dehydrogenase kinasephosphatase CS348_22685 IPR006254 Isocitrate lyase CS348_22685 IPR040442 Pyruvate kinase-like domain superfamily CS348_22685 IPR039556 ICL/PEPM domain CS348_22685 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CS348_22685 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_22690 IPR011076 Malate synthase-like superfamily CS348_22690 IPR006252 Malate synthase A CS348_22690 IPR001465 Malate synthase CS348_22690 IPR019830 Malate synthase, conserved site CS348_22695 IPR029062 Class I glutamine amidotransferase-like CS348_22695 IPR005697 Homoserine O-succinyltransferase MetA CS348_22695 IPR033752 MetA family CS348_22700 IPR000182 GNAT domain CS348_22700 IPR016181 Acyl-CoA N-acyltransferase CS348_22725 IPR024051 AICAR transformylase, duplicated domain superfamily CS348_22725 IPR011607 Methylglyoxal synthase-like domain CS348_22725 IPR016193 Cytidine deaminase-like CS348_22725 IPR036914 Methylglyoxal synthase-like domain superfamily CS348_22725 IPR002695 Bifunctional purine biosynthesis protein PurH-like CS348_22730 IPR011761 ATP-grasp fold CS348_22730 IPR011054 Rudiment single hybrid motif CS348_22730 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CS348_22730 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CS348_22730 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CS348_22730 IPR013815 ATP-grasp fold, subdomain 1 CS348_22730 IPR000115 Phosphoribosylglycinamide synthetase CS348_22730 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CS348_22730 IPR016185 Pre-ATP-grasp domain superfamily CS348_22730 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CS348_22735 IPR009057 Homeobox-like domain superfamily CS348_22735 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CS348_22735 IPR011006 CheY-like superfamily CS348_22735 IPR003593 AAA+ ATPase domain CS348_22735 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_22735 IPR001789 Signal transduction response regulator, receiver domain CS348_22735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_22735 IPR025944 Sigma-54 interaction domain, conserved site CS348_22735 IPR002197 DNA binding HTH domain, Fis-type CS348_22735 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CS348_22740 IPR003594 Histidine kinase/HSP90-like ATPase CS348_22740 IPR029151 Periplasmic sensor-like domain superfamily CS348_22740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_22740 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_22740 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_22740 IPR005467 Histidine kinase domain CS348_22740 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_22745 IPR025961 Heavy-metal resistance protein CS348_22750 IPR010858 Protein of unknown function DUF1481 CS348_22750 IPR016500 Uncharacterised conserved protein UCP006993 CS348_22755 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CS348_22755 IPR020816 Histone-like DNA-binding protein, conserved site CS348_22755 IPR000119 Histone-like DNA-binding protein CS348_22760 IPR023381 YP001051499.1-like domain superfamily CS348_22760 IPR007338 Protein of unknown function DUF416 CS348_22765 IPR007581 Endonuclease V CS348_22770 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CS348_22770 IPR038071 UROD/MetE-like superfamily CS348_22770 IPR006361 Uroporphyrinogen decarboxylase HemE CS348_22775 IPR020084 NUDIX hydrolase, conserved site CS348_22775 IPR015376 Zinc ribbon, NADH pyrophosphatase CS348_22775 IPR000086 NUDIX hydrolase domain CS348_22775 IPR015797 NUDIX hydrolase-like domain superfamily CS348_22775 IPR022925 NADH pyrophosphatase NudC CS348_22780 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CS348_22780 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd CS348_22780 IPR038309 Rsd/AlgQ superfamily CS348_22785 IPR037509 Phosphomethylpyrimidine synthase CS348_22785 IPR025747 ThiC-associated domain CS348_22785 IPR038521 ThiC/Bza superfamily CS348_22785 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B CS348_22790 IPR022998 Thiamine phosphate synthase/TenI CS348_22790 IPR034291 Thiamine phosphate synthase CS348_22790 IPR013785 Aldolase-type TIM barrel CS348_22790 IPR036206 Thiamin phosphate synthase superfamily CS348_22795 IPR000594 THIF-type NAD/FAD binding fold CS348_22795 IPR035985 Ubiquitin-activating enzyme CS348_22795 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF CS348_22800 IPR003749 Sulfur carrier ThiS/MoaD-like CS348_22800 IPR010035 ThiS, thiamine-biosynthesis CS348_22800 IPR012675 Beta-grasp domain superfamily CS348_22800 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CS348_22805 IPR033983 Thiazole synthase ThiG CS348_22805 IPR008867 Thiazole synthase CS348_22805 IPR013785 Aldolase-type TIM barrel CS348_22810 IPR010722 Biotin and thiamin synthesis-associated domain CS348_22810 IPR012726 Thiazole biosynthesis ThiH CS348_22810 IPR007197 Radical SAM CS348_22810 IPR013785 Aldolase-type TIM barrel CS348_22810 IPR034428 ThiH/NocL/HydG-like CS348_22830 IPR007083 RNA polymerase Rpb1, domain 4 CS348_22830 IPR000722 RNA polymerase, alpha subunit CS348_22830 IPR006592 RNA polymerase, N-terminal CS348_22830 IPR007066 RNA polymerase Rpb1, domain 3 CS348_22830 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CS348_22830 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CS348_22830 IPR007080 RNA polymerase Rpb1, domain 1 CS348_22830 IPR007081 RNA polymerase Rpb1, domain 5 CS348_22830 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CS348_22835 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CS348_22835 IPR007641 RNA polymerase Rpb2, domain 7 CS348_22835 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CS348_22835 IPR015712 DNA-directed RNA polymerase, subunit 2 CS348_22835 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CS348_22835 IPR014724 RNA polymerase Rpb2, OB-fold CS348_22835 IPR007121 RNA polymerase, beta subunit, conserved site CS348_22835 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CS348_22835 IPR007642 RNA polymerase Rpb2, domain 2 CS348_22835 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CS348_22835 IPR007645 RNA polymerase Rpb2, domain 3 CS348_22835 IPR007644 RNA polymerase, beta subunit, protrusion CS348_22840 IPR008932 Ribosomal protein L7/L12, oligomerisation CS348_22840 IPR000206 Ribosomal protein L7/L12 CS348_22840 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CS348_22840 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CS348_22840 IPR013823 Ribosomal protein L7/L12, C-terminal CS348_22845 IPR002363 Ribosomal protein L10, eubacterial, conserved site CS348_22845 IPR022973 Ribosomal protein L10 CS348_22845 IPR001790 Ribosomal protein L10P CS348_22855 IPR005878 Ribosomal protein L1, bacterial-type CS348_22855 IPR002143 Ribosomal protein L1 CS348_22855 IPR023674 Ribosomal protein L1-like CS348_22855 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CS348_22855 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CS348_22855 IPR023673 Ribosomal protein L1, conserved site CS348_22860 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CS348_22860 IPR020785 Ribosomal protein L11, conserved site CS348_22860 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CS348_22860 IPR020783 Ribosomal protein L11, C-terminal CS348_22860 IPR006519 Ribosomal protein L11, bacterial-type CS348_22860 IPR020784 Ribosomal protein L11, N-terminal CS348_22860 IPR000911 Ribosomal protein L11/L12 CS348_22865 IPR008991 Translation protein SH3-like domain superfamily CS348_22865 IPR014722 Ribosomal protein L2, domain 2 CS348_22865 IPR001062 Transcription antitermination protein, NusG CS348_22865 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CS348_22865 IPR036735 NusG, N-terminal domain superfamily CS348_22865 IPR006645 NusG, N-terminal CS348_22865 IPR005824 KOW CS348_22870 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CS348_22870 IPR038379 SecE superfamily CS348_22870 IPR005807 SecE subunit of protein translocation complex, bacterial-like CS348_22875 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CS348_22875 IPR005225 Small GTP-binding protein domain CS348_22875 IPR004161 Translation elongation factor EFTu-like, domain 2 CS348_22875 IPR033720 Elongation factor Tu, domain 2 CS348_22875 IPR031157 Tr-type G domain, conserved site CS348_22875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_22875 IPR000795 Transcription factor, GTP-binding domain CS348_22875 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CS348_22875 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CS348_22875 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CS348_22875 IPR009000 Translation protein, beta-barrel domain superfamily CS348_22910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_22910 IPR004566 Pantothenate kinase CS348_22910 IPR006083 Phosphoribulokinase/uridine kinase CS348_22915 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_22915 IPR030855 Bifunctional ligase/repressor BirA CS348_22915 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CS348_22915 IPR004409 Biotin operon repressor, helix-turn-helix domain CS348_22915 IPR003142 Biotin protein ligase, C-terminal CS348_22915 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CS348_22915 IPR036390 Winged helix DNA-binding domain superfamily CS348_22915 IPR008988 Transcriptional repressor, C-terminal CS348_22915 IPR013196 Helix-turn-helix, type 11 CS348_22920 IPR006094 FAD linked oxidase, N-terminal CS348_22920 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CS348_22920 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CS348_22920 IPR016169 FAD-binding, type PCMH, subdomain 2 CS348_22920 IPR016166 FAD-binding domain, PCMH-type CS348_22920 IPR036318 FAD-binding, type PCMH-like superfamily CS348_22920 IPR016167 FAD-binding, type PCMH, subdomain 1 CS348_22920 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CS348_22955 IPR018187 Asp/Glu racemase, active site 1 CS348_22955 IPR015942 Asp/Glu/hydantoin racemase CS348_22955 IPR004391 Glutamate racemase CS348_22955 IPR033134 Asp/Glu racemase, active site 2 CS348_22955 IPR001920 Asp/Glu racemase CS348_22960 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CS348_22960 IPR010101 TonB-dependent vitamin B12 transporter BtuB CS348_22960 IPR039426 Vitamin B12 transporter BtuB-like CS348_22960 IPR012910 TonB-dependent receptor, plug domain CS348_22960 IPR037066 TonB-dependent receptor, plug domain superfamily CS348_22960 IPR000531 TonB-dependent receptor-like, beta-barrel CS348_22960 IPR010916 TonB box, conserved site CS348_22960 IPR010917 TonB-dependent receptor, conserved site CS348_22965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_22965 IPR010280 (Uracil-5)-methyltransferase family CS348_22965 IPR030391 RNA methyltransferase TrmA, conserved site CS348_22965 IPR030390 RNA methyltransferase TrmA, active site CS348_22965 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA CS348_22970 IPR009867 Protein of unknown function DUF1422 CS348_22975 IPR009057 Homeobox-like domain superfamily CS348_22975 IPR023764 Transcriptional repressor HTH, FabR CS348_22975 IPR001647 DNA-binding HTH domain, TetR-type CS348_22985 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CS348_22985 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CS348_22985 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CS348_22985 IPR023753 FAD/NAD(P)-binding domain CS348_22985 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_22985 IPR022962 Soluble pyridine nucleotide transhydrogenase CS348_22990 IPR036390 Winged helix DNA-binding domain superfamily CS348_22990 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_22990 IPR000847 Transcription regulator HTH, LysR CS348_22990 IPR005119 LysR, substrate-binding CS348_23000 IPR029419 Argininosuccinate lyase, C-terminal CS348_23000 IPR000362 Fumarate lyase family CS348_23000 IPR022761 Fumarate lyase, N-terminal CS348_23000 IPR008948 L-Aspartase-like CS348_23000 IPR024083 Fumarase/histidase, N-terminal CS348_23000 IPR009049 Argininosuccinate lyase CS348_23000 IPR020557 Fumarate lyase, conserved site CS348_23005 IPR004662 Acetylglutamate kinase family CS348_23005 IPR036393 Acetylglutamate kinase-like superfamily CS348_23005 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic CS348_23005 IPR037528 Acetylglutamate kinase ArgB CS348_23005 IPR001048 Aspartate/glutamate/uridylate kinase CS348_23010 IPR000534 Semialdehyde dehydrogenase, NAD-binding CS348_23010 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CS348_23010 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 CS348_23010 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CS348_23010 IPR036291 NAD(P)-binding domain superfamily CS348_23015 IPR002933 Peptidase M20 CS348_23015 IPR036264 Bacterial exopeptidase dimerisation domain CS348_23015 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CS348_23015 IPR011650 Peptidase M20, dimerisation domain CS348_23015 IPR010169 Acetylornithine deacetylase ArgE CS348_23025 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CS348_23025 IPR033129 Phosphoenolpyruvate carboxylase, His active site CS348_23025 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site CS348_23025 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type CS348_23025 IPR021135 Phosphoenolpyruvate carboxylase CS348_23030 IPR000917 Sulfatase, N-terminal CS348_23030 IPR040423 Phosphoethanolamine transferase CS348_23030 IPR017850 Alkaline-phosphatase-like, core domain superfamily CS348_23035 IPR020449 Transcription regulator HTH, AraC- type CS348_23035 IPR018062 HTH domain AraC-type, conserved site CS348_23035 IPR018060 DNA binding HTH domain, AraC-type CS348_23035 IPR009057 Homeobox-like domain superfamily CS348_23040 IPR013785 Aldolase-type TIM barrel CS348_23040 IPR018225 Transaldolase, active site CS348_23040 IPR023001 Fructose-6-phosphate aldolase CS348_23040 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CS348_23040 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase CS348_23040 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial CS348_23045 IPR016205 Glycerol dehydrogenase CS348_23045 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CS348_23045 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CS348_23050 IPR010255 Haem peroxidase superfamily CS348_23050 IPR019794 Peroxidase, active site CS348_23050 IPR000763 Catalase-peroxidase haem CS348_23050 IPR019793 Peroxidases heam-ligand binding site CS348_23050 IPR002016 Haem peroxidase CS348_23055 IPR029041 FAD-linked oxidoreductase-like CS348_23055 IPR003171 Methylenetetrahydrofolate reductase CS348_23055 IPR004620 5,10-methylenetetrahydrofolate reductase CS348_23060 IPR029052 Metallo-dependent phosphatase-like CS348_23060 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CS348_23060 IPR006146 5'-Nucleotidase, conserved site CS348_23060 IPR006179 5'-Nucleotidase/apyrase CS348_23060 IPR041498 Bacterial Ig domain CS348_23060 IPR008334 5'-Nucleotidase, C-terminal CS348_23060 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CS348_23080 IPR018042 Aspartate kinase, conserved site CS348_23080 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I CS348_23080 IPR001342 Homoserine dehydrogenase, catalytic CS348_23080 IPR019811 Homoserine dehydrogenase, conserved site CS348_23080 IPR001048 Aspartate/glutamate/uridylate kinase CS348_23080 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CS348_23080 IPR001341 Aspartate kinase CS348_23080 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain CS348_23080 IPR036393 Acetylglutamate kinase-like superfamily CS348_23080 IPR036291 NAD(P)-binding domain superfamily CS348_23085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_23085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_23085 IPR015424 Pyridoxal phosphate-dependent transferase CS348_23085 IPR011821 O-succinylhomoserine (thiol)-lyase CS348_23085 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CS348_23090 IPR002084 Methionine repressor MetJ CS348_23090 IPR010985 Ribbon-helix-helix CS348_23090 IPR023453 Methionine repressor MetJ domain superfamily CS348_23095 IPR035391 Arylsulfotransferase, Ig-like domain CS348_23095 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria CS348_23095 IPR010262 Arylsulfotransferase, bacteria CS348_23095 IPR038477 Arylsulfotransferase, N-terminal domain superfamily CS348_23105 IPR002150 Ribosomal protein L31 CS348_23105 IPR034704 L28p-like CS348_23105 IPR042105 Ribosomal protein L31 superfamily CS348_23105 IPR027491 Ribosomal protein L31 type A CS348_23110 IPR011545 DEAD/DEAH box helicase domain CS348_23110 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CS348_23110 IPR001650 Helicase, C-terminal CS348_23110 IPR041236 Primosomal protein N, C-terminal domain CS348_23110 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_23110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_23110 IPR005259 Primosomal protein N' CS348_23110 IPR041222 Primosomal protein N', 3' DNA-binding domain CS348_23110 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CS348_23115 IPR028082 Periplasmic binding protein-like I CS348_23115 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_23115 IPR000843 LacI-type HTH domain CS348_23120 IPR011930 Cell division protein FtsN CS348_23120 IPR007730 Sporulation-like domain CS348_23120 IPR036680 Sporulation-like domain superfamily CS348_23125 IPR022281 ATP-dependent protease, HslV subunit CS348_23125 IPR001353 Proteasome, subunit alpha/beta CS348_23125 IPR029055 Nucleophile aminohydrolases, N-terminal CS348_23125 IPR023333 Proteasome B-type subunit CS348_23130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_23130 IPR003959 ATPase, AAA-type, core CS348_23130 IPR003593 AAA+ ATPase domain CS348_23130 IPR019489 Clp ATPase, C-terminal CS348_23130 IPR004491 Heat shock protein HslU CS348_23135 IPR026046 UbiA prenyltransferase domain containing protein 1 CS348_23135 IPR000537 UbiA prenyltransferase family CS348_23135 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase CS348_23140 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria CS348_23140 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily CS348_23140 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CS348_23140 IPR010203 Regulator of ribonuclease activity A CS348_23145 IPR009252 Cell division protein ZapB CS348_23150 IPR022357 Major intrinsic protein, conserved site CS348_23150 IPR000425 Major intrinsic protein CS348_23150 IPR023271 Aquaporin-like CS348_23155 IPR018485 Carbohydrate kinase, FGGY, C-terminal CS348_23155 IPR000577 Carbohydrate kinase, FGGY CS348_23155 IPR005999 Glycerol kinase CS348_23155 IPR018484 Carbohydrate kinase, FGGY, N-terminal CS348_23155 IPR018483 Carbohydrate kinase, FGGY, conserved site CS348_23160 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase CS348_23165 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CS348_23165 IPR017938 Riboflavin synthase-like beta-barrel CS348_23165 IPR017927 FAD-binding domain, ferredoxin reductase-type CS348_23165 IPR033892 Ferredoxin--NADP reductase, bacteria CS348_23165 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CS348_23165 IPR001433 Oxidoreductase FAD/NAD(P)-binding CS348_23170 IPR008523 Protein of unknown function DUF805 CS348_23175 IPR009918 Protein of unknown function DUF1454 CS348_23180 IPR000652 Triosephosphate isomerase CS348_23180 IPR035990 Triosephosphate isomerase superfamily CS348_23180 IPR013785 Aldolase-type TIM barrel CS348_23180 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CS348_23180 IPR020861 Triosephosphate isomerase, active site CS348_23185 IPR013785 Aldolase-type TIM barrel CS348_23185 IPR011060 Ribulose-phosphate binding barrel CS348_23185 IPR000056 Ribulose-phosphate 3-epimerase-like CS348_23190 IPR007138 Antibiotic biosynthesis monooxygenase domain CS348_23190 IPR011008 Dimeric alpha-beta barrel CS348_23190 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase CS348_23195 IPR041720 Aldolase FbaB-like, archaeal-type CS348_23195 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase CS348_23195 IPR002915 DeoC/FbaB/ lacD aldolase CS348_23195 IPR013785 Aldolase-type TIM barrel CS348_23200 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB CS348_23200 IPR028082 Periplasmic binding protein-like I CS348_23200 IPR025997 Periplasmic binding protein CS348_23205 IPR001851 ABC transporter, permease CS348_23210 IPR001851 ABC transporter, permease CS348_23215 IPR003593 AAA+ ATPase domain CS348_23215 IPR003439 ABC transporter-like CS348_23215 IPR030281 Autoinducer 2 import ATP-binding protein LsrA CS348_23215 IPR017871 ABC transporter, conserved site CS348_23215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_23220 IPR007324 Sugar-binding domain, putative CS348_23220 IPR037171 NagB/RpiA transferase-like CS348_23220 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_23225 IPR033676 Autoinducer-2 kinase CS348_23225 IPR000577 Carbohydrate kinase, FGGY CS348_23225 IPR018485 Carbohydrate kinase, FGGY, C-terminal CS348_23225 IPR018484 Carbohydrate kinase, FGGY, N-terminal CS348_23245 IPR004839 Aminotransferase, class I/classII CS348_23245 IPR015424 Pyridoxal phosphate-dependent transferase CS348_23245 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_23245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_23245 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_23245 IPR036390 Winged helix DNA-binding domain superfamily CS348_23245 IPR000524 Transcription regulator HTH, GntR CS348_23255 IPR029056 Ribokinase-like CS348_23255 IPR002139 Ribokinase/fructokinase CS348_23255 IPR011611 Carbohydrate kinase PfkB CS348_23255 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_23260 IPR039672 Lactose permease-like CS348_23260 IPR001927 Sodium:galactoside symporter CS348_23260 IPR018043 Sodium:galactoside symporter, conserved site CS348_23260 IPR036259 MFS transporter superfamily CS348_23265 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily CS348_23265 IPR036265 HIT-like superfamily CS348_23265 IPR003763 CDP-diacylglycerol pyrophosphatase CS348_23265 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial CS348_23270 IPR000957 Sulphate/thiosulphate-binding, conserved site CS348_23270 IPR034408 Sulphate/thiosulphate-binding site CS348_23270 IPR005669 Thiosulphate/Sulfate-binding protein CS348_23275 IPR000023 Phosphofructokinase domain CS348_23275 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic CS348_23275 IPR015912 Phosphofructokinase, conserved site CS348_23275 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type CS348_23275 IPR035966 Phosphofructokinase superfamily CS348_23275 IPR022953 ATP-dependent 6-phosphofructokinase CS348_23280 IPR027469 Cation efflux transmembrane domain superfamily CS348_23280 IPR023783 Cation efflux pump FieF CS348_23280 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CS348_23280 IPR027470 Cation efflux protein, cytoplasmic domain CS348_23280 IPR002524 Cation efflux protein CS348_23290 IPR007684 Zinc finger, Ogr/Delta-type CS348_23330 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CS348_23335 IPR037053 Phage tail collar domain superfamily CS348_23335 IPR011083 Phage tail collar domain CS348_23335 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 CS348_23335 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal CS348_23335 IPR008969 Carboxypeptidase-like, regulatory domain superfamily CS348_23420 IPR030935 Phage portal protein PBSX family, Proteobacteria CS348_23420 IPR006430 Phage portal protein PBSX family CS348_23440 IPR008766 Replication gene A protein CS348_23480 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_23480 IPR023009 Tyrosine recombinase XerC/XerD CS348_23480 IPR011931 Tyrosine recombinase XerC CS348_23480 IPR013762 Integrase-like, catalytic domain superfamily CS348_23480 IPR002104 Integrase, catalytic domain CS348_23480 IPR004107 Integrase, SAM-like, N-terminal CS348_23480 IPR010998 Integrase/recombinase, N-terminal CS348_23485 IPR012899 LTXXQ motif family protein CS348_23490 IPR011006 CheY-like superfamily CS348_23490 IPR001867 OmpR/PhoB-type DNA-binding domain CS348_23490 IPR001789 Signal transduction response regulator, receiver domain CS348_23490 IPR039420 Transcriptional regulatory protein WalR-like CS348_23490 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_23495 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_23495 IPR032404 Two-component sensor protein CpxA, periplasmic domain CS348_23495 IPR003594 Histidine kinase/HSP90-like ATPase CS348_23495 IPR038515 CpxA, periplasmic domain superfamily CS348_23495 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_23495 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_23495 IPR003660 HAMP domain CS348_23495 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_23495 IPR005467 Histidine kinase domain CS348_23505 IPR005163 3-alpha domain CS348_23505 IPR011037 Pyruvate kinase-like, insert domain superfamily CS348_23505 IPR005302 Molybdenum cofactor sulfurase, C-terminal CS348_23510 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CS348_23510 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CS348_23510 IPR001189 Manganese/iron superoxide dismutase CS348_23510 IPR019831 Manganese/iron superoxide dismutase, N-terminal CS348_23510 IPR019833 Manganese/iron superoxide dismutase, binding site CS348_23510 IPR019832 Manganese/iron superoxide dismutase, C-terminal CS348_23515 IPR004682 TRAP transporter solute receptor, DctP family CS348_23515 IPR018389 TRAP transporter solute receptor DctP/TeaA CS348_23515 IPR038404 TRAP transporter solute receptor DctP superfamily CS348_23520 IPR007387 TRAP transporter, small membrane protein DctQ CS348_23525 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CS348_23525 IPR004681 TRAP transporter large membrane protein DctM CS348_23530 IPR009331 Oligogalacturonate-specific porin CS348_23535 IPR004673 L-rhamnose-proton symport, RhaT CS348_23540 IPR020449 Transcription regulator HTH, AraC- type CS348_23540 IPR023699 Transcription activator HTH, RhaR CS348_23540 IPR014710 RmlC-like jelly roll fold CS348_23540 IPR018060 DNA binding HTH domain, AraC-type CS348_23540 IPR009057 Homeobox-like domain superfamily CS348_23540 IPR003313 AraC-type arabinose-binding/dimerisation domain CS348_23540 IPR011051 RmlC-like cupin domain superfamily CS348_23540 IPR018062 HTH domain AraC-type, conserved site CS348_23545 IPR003313 AraC-type arabinose-binding/dimerisation domain CS348_23545 IPR009057 Homeobox-like domain superfamily CS348_23545 IPR037923 Transcription regulator HTH-like CS348_23545 IPR018060 DNA binding HTH domain, AraC-type CS348_23545 IPR018062 HTH domain AraC-type, conserved site CS348_23545 IPR014710 RmlC-like jelly roll fold CS348_23545 IPR020449 Transcription regulator HTH, AraC- type CS348_23545 IPR023609 Transcription regulator HTH, RhaS CS348_23550 IPR018484 Carbohydrate kinase, FGGY, N-terminal CS348_23550 IPR013449 Rhamnulokinase CS348_23550 IPR018485 Carbohydrate kinase, FGGY, C-terminal CS348_23555 IPR036237 Xylose isomerase-like superfamily CS348_23555 IPR009308 Rhamnose isomerase CS348_23560 IPR013447 Rhamnulose-1-phosphate aldolase CS348_23560 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CS348_23560 IPR001303 Class II aldolase/adducin N-terminal CS348_23565 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CS348_23565 IPR039697 Iron-type alcohol dehydrogenase-like CS348_23565 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CS348_23570 IPR008000 Rhamnose/fucose mutarotase CS348_23570 IPR013448 L-rhamnose mutarotase CS348_23570 IPR011008 Dimeric alpha-beta barrel CS348_23580 IPR004471 Branched-chain amino acid transport, AzlC CS348_23580 IPR011606 Branched-chain amino acid transport, permease CS348_23590 IPR024291 Protein of unknown function DUF3829 CS348_23600 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_23600 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_23600 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_23600 IPR006443 Formate dehydrogenase-N, alpha subunit CS348_23600 IPR006657 Molybdopterin dinucleotide-binding domain CS348_23600 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_23600 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_23600 IPR006656 Molybdopterin oxidoreductase CS348_23605 IPR006443 Formate dehydrogenase-N, alpha subunit CS348_23605 IPR006657 Molybdopterin dinucleotide-binding domain CS348_23605 IPR009010 Aspartate decarboxylase-like domain superfamily CS348_23605 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CS348_23605 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CS348_23605 IPR006311 Twin-arginine translocation pathway, signal sequence CS348_23605 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CS348_23605 IPR006656 Molybdopterin oxidoreductase CS348_23610 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CS348_23610 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CS348_23610 IPR015246 Formate dehydrogenase, transmembrane CS348_23610 IPR038384 Formate dehydrogenase, C-terminal domain superfamily CS348_23610 IPR014603 Formate dehydrogenase iron-sulphur subunit CS348_23610 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria CS348_23615 IPR006471 Formate dehydrogenase, gamma subunit CS348_23615 IPR016174 Di-haem cytochrome, transmembrane CS348_23615 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CS348_23620 IPR006452 Formate dehydrogenase accessory protein CS348_23620 IPR024064 FdhE-like superfamily CS348_23630 IPR009387 Toxin HigB-2 CS348_23635 IPR029058 Alpha/Beta hydrolase fold CS348_23635 IPR013094 Alpha/beta hydrolase fold-3 CS348_23640 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative CS348_23645 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_23645 IPR001387 Cro/C1-type helix-turn-helix domain CS348_23645 IPR039060 Antitoxin HigA CS348_23650 IPR000182 GNAT domain CS348_23650 IPR029069 HotDog domain superfamily CS348_23650 IPR012660 Thioesterase, putative CS348_23650 IPR016181 Acyl-CoA N-acyltransferase CS348_23655 IPR003732 D-aminoacyl-tRNA deacylase DTD CS348_23655 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CS348_23660 IPR017039 Virulence factor BrkB CS348_23660 IPR023679 Uncharacterised protein family UPF0761, bacterial CS348_23665 IPR023214 HAD superfamily CS348_23665 IPR036412 HAD-like superfamily CS348_23665 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CS348_23665 IPR041492 Haloacid dehalogenase-like hydrolase CS348_23665 IPR006439 HAD hydrolase, subfamily IA CS348_23670 IPR011991 ArsR-like helix-turn-helix domain CS348_23670 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_23670 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CS348_23670 IPR036390 Winged helix DNA-binding domain superfamily CS348_23670 IPR037171 NagB/RpiA transferase-like CS348_23670 IPR001034 DeoR-type HTH domain CS348_23670 IPR014036 DeoR C-terminal sensor domain CS348_23675 IPR011611 Carbohydrate kinase PfkB CS348_23675 IPR002139 Ribokinase/fructokinase CS348_23675 IPR029056 Ribokinase-like CS348_23675 IPR030877 Sulfofructose kinase CS348_23675 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_23680 IPR036291 NAD(P)-binding domain superfamily CS348_23680 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CS348_23680 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CS348_23680 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CS348_23680 IPR030876 3-sulfolactaldehyde reductase CS348_23680 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_23680 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CS348_23680 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_23685 IPR013785 Aldolase-type TIM barrel CS348_23685 IPR002915 DeoC/FbaB/ lacD aldolase CS348_23685 IPR017291 Sulfofructosephosphate aldolase, YihT CS348_23690 IPR012341 Six-hairpin glycosidase-like superfamily CS348_23690 IPR008928 Six-hairpin glycosidase superfamily CS348_23690 IPR034116 AGE domain CS348_23690 IPR030875 Sulfoquinovose isomerase CS348_23695 IPR011013 Galactose mutarotase-like domain superfamily CS348_23695 IPR037480 YihR-like CS348_23695 IPR014718 Glycoside hydrolase-type carbohydrate-binding CS348_23695 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CS348_23700 IPR011013 Galactose mutarotase-like domain superfamily CS348_23700 IPR000322 Glycoside hydrolase family 31 CS348_23700 IPR013780 Glycosyl hydrolase, all-beta CS348_23700 IPR017853 Glycoside hydrolase superfamily CS348_23705 IPR018043 Sodium:galactoside symporter, conserved site CS348_23705 IPR039672 Lactose permease-like CS348_23705 IPR036259 MFS transporter superfamily CS348_23705 IPR001927 Sodium:galactoside symporter CS348_23710 IPR001927 Sodium:galactoside symporter CS348_23710 IPR036259 MFS transporter superfamily CS348_23710 IPR039672 Lactose permease-like CS348_23710 IPR018043 Sodium:galactoside symporter, conserved site CS348_23715 IPR009331 Oligogalacturonate-specific porin CS348_23735 IPR023404 Radical SAM, alpha/beta horseshoe CS348_23735 IPR007197 Radical SAM CS348_23735 IPR006638 Elp3/MiaB/NifB CS348_23735 IPR034505 Anaerobic coproporphyrinogen-III oxidase CS348_23735 IPR004559 Heme chaperone HemW-like CS348_23745 IPR000150 Cof family CS348_23745 IPR036412 HAD-like superfamily CS348_23745 IPR006379 HAD-superfamily hydrolase, subfamily IIB CS348_23745 IPR023214 HAD superfamily CS348_23760 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CS348_23760 IPR001637 Glutamine synthetase class-I, adenylation site CS348_23760 IPR027303 Glutamine synthetase, glycine-rich site CS348_23760 IPR008146 Glutamine synthetase, catalytic domain CS348_23760 IPR036651 Glutamine synthetase, N-terminal domain superfamily CS348_23760 IPR027302 Glutamine synthetase, N-terminal conserved site CS348_23760 IPR004809 Glutamine synthetase type I CS348_23760 IPR008147 Glutamine synthetase, beta-Grasp domain CS348_23770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_23770 IPR003594 Histidine kinase/HSP90-like ATPase CS348_23770 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_23770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_23770 IPR005467 Histidine kinase domain CS348_23770 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_23770 IPR000014 PAS domain CS348_23770 IPR035965 PAS domain superfamily CS348_23770 IPR013767 PAS fold CS348_23775 IPR011006 CheY-like superfamily CS348_23775 IPR025944 Sigma-54 interaction domain, conserved site CS348_23775 IPR010114 DNA-binding transcriptional regulator NtrC CS348_23775 IPR002197 DNA binding HTH domain, Fis-type CS348_23775 IPR001789 Signal transduction response regulator, receiver domain CS348_23775 IPR002078 RNA polymerase sigma factor 54 interaction domain CS348_23775 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CS348_23775 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CS348_23775 IPR009057 Homeobox-like domain superfamily CS348_23775 IPR003593 AAA+ ATPase domain CS348_23775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_23785 IPR007197 Radical SAM CS348_23785 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN CS348_23785 IPR034505 Anaerobic coproporphyrinogen-III oxidase CS348_23785 IPR006638 Elp3/MiaB/NifB CS348_23785 IPR023404 Radical SAM, alpha/beta horseshoe CS348_23785 IPR010723 HemN, C-terminal CS348_23790 IPR007336 Der GTPase activator CS348_23800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_23800 IPR006073 GTP binding domain CS348_23800 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CS348_23800 IPR030393 EngB-type guanine nucleotide-binding (G) domain CS348_23805 IPR020045 DNA polymerase I-like, H3TH domain CS348_23805 IPR018320 DNA polymerase 1 CS348_23805 IPR008918 Helix-hairpin-helix motif, class 2 CS348_23805 IPR002562 3'-5' exonuclease domain CS348_23805 IPR019760 DNA-directed DNA polymerase, family A, conserved site CS348_23805 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CS348_23805 IPR002421 5'-3' exonuclease, N-terminal CS348_23805 IPR036397 Ribonuclease H superfamily CS348_23805 IPR012337 Ribonuclease H-like superfamily CS348_23805 IPR029060 PIN-like domain superfamily CS348_23805 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CS348_23805 IPR002298 DNA polymerase A CS348_23805 IPR001098 DNA-directed DNA polymerase, family A, palm domain CS348_23815 IPR002123 Phospholipid/glycerol acyltransferase CS348_23820 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CS348_23820 IPR013766 Thioredoxin domain CS348_23820 IPR017937 Thioredoxin, conserved site CS348_23820 IPR036249 Thioredoxin-like superfamily CS348_23820 IPR001853 DSBA-like thioredoxin domain CS348_23825 IPR032882 SrkA/RdoA protein kinase CS348_23825 IPR011009 Protein kinase-like domain superfamily CS348_23825 IPR002575 Aminoglycoside phosphotransferase CS348_23830 IPR009383 Protein of unknown function DUF1040 CS348_23830 IPR038134 YihD-like superfamily CS348_23835 IPR029044 Nucleotide-diphospho-sugar transferases CS348_23835 IPR025877 MobA-like NTP transferase CS348_23835 IPR013482 Molybdenum cofactor guanylyltransferase CS348_23840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_23840 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CS348_23875 IPR026816 Flavodoxin domain CS348_23875 IPR029039 Flavoprotein-like superfamily CS348_23875 IPR008254 Flavodoxin/nitric oxide synthase CS348_23875 IPR001226 Flavodoxin, conserved site CS348_23880 IPR004772 TrkH potassium transport family CS348_23880 IPR003445 Cation transporter CS348_23885 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_23885 IPR035647 EF-G domain III/V-like CS348_23885 IPR023582 Impact family CS348_23885 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CS348_23885 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CS348_23885 IPR015796 Impact family, bacterial/archaeal CS348_23885 IPR036956 Impact, N-terminal domain superfamily CS348_23885 IPR001498 Impact, N-terminal CS348_23890 IPR036005 Creatinase/aminopeptidase-like CS348_23890 IPR000994 Peptidase M24 CS348_23890 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CS348_23890 IPR022846 Xaa-Pro dipeptidase CS348_23890 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CS348_23895 IPR036291 NAD(P)-binding domain superfamily CS348_23895 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CS348_23895 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CS348_23895 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CS348_23895 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_23895 IPR012799 Fatty oxidation complex, alpha subunit FadB CS348_23895 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CS348_23895 IPR029045 ClpP/crotonase-like domain superfamily CS348_23895 IPR001753 Enoyl-CoA hydratase/isomerase CS348_23900 IPR016039 Thiolase-like CS348_23900 IPR002155 Thiolase CS348_23900 IPR012805 Acetyl-CoA C-acyltransferase FadA CS348_23900 IPR020616 Thiolase, N-terminal CS348_23900 IPR020613 Thiolase, conserved site CS348_23900 IPR020615 Thiolase, acyl-enzyme intermediate active site CS348_23900 IPR020610 Thiolase, active site CS348_23900 IPR020617 Thiolase, C-terminal CS348_23905 IPR035391 Arylsulfotransferase, Ig-like domain CS348_23905 IPR010262 Arylsulfotransferase, bacteria CS348_23905 IPR038477 Arylsulfotransferase, N-terminal domain superfamily CS348_23905 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria CS348_23910 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CS348_23910 IPR017927 FAD-binding domain, ferredoxin reductase-type CS348_23910 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CS348_23910 IPR017938 Riboflavin synthase-like beta-barrel CS348_23910 IPR001433 Oxidoreductase FAD/NAD(P)-binding CS348_23915 IPR023677 UbiD decarboxylyase, bacteria CS348_23915 IPR002830 UbiD decarboxylyase family CS348_23920 IPR006645 NusG, N-terminal CS348_23920 IPR036735 NusG, N-terminal domain superfamily CS348_23920 IPR010215 Transcription antitermination protein RfaH CS348_23925 IPR001130 TatD family CS348_23925 IPR018228 Deoxyribonuclease, TatD-related, conserved site CS348_23925 IPR032466 Metal-dependent hydrolase CS348_23925 IPR024918 3'-5' ssDNA/RNA exonuclease TatD CS348_23930 IPR002033 Sec-independent periplasmic protein translocase TatC CS348_23930 IPR019820 Sec-independent periplasmic protein translocase, conserved site CS348_23935 IPR018448 Twin-arginine translocation protein TatB CS348_23940 IPR006312 Sec-independent protein translocase protein TatA/E CS348_23940 IPR003369 Sec-independent protein translocase protein TatA/B/E CS348_23945 IPR004147 UbiB domain CS348_23945 IPR011009 Protein kinase-like domain superfamily CS348_23945 IPR010232 Probable protein kinase UbiB CS348_23950 IPR036527 SCP2 sterol-binding domain superfamily CS348_23950 IPR038989 Ubiquinone biosynthesis protein UbiJ CS348_23950 IPR003033 SCP2 sterol-binding domain CS348_23955 IPR023576 UbiE/COQ5 methyltransferase, conserved site CS348_23955 IPR004033 UbiE/COQ5 methyltransferase CS348_23955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_23960 IPR003798 DNA recombination RmuC CS348_23965 IPR010058 Uridine phosphorylase CS348_23965 IPR018016 Nucleoside phosphorylase, conserved site CS348_23965 IPR000845 Nucleoside phosphorylase domain CS348_23965 IPR035994 Nucleoside phosphorylase superfamily CS348_23970 IPR029058 Alpha/Beta hydrolase fold CS348_23970 IPR002925 Dienelactone hydrolase CS348_23975 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme CS348_23975 IPR013785 Aldolase-type TIM barrel CS348_23975 IPR023885 4Fe4S-binding SPASM domain CS348_23975 IPR007197 Radical SAM CS348_23980 IPR038071 UROD/MetE-like superfamily CS348_23980 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CS348_23980 IPR006276 Cobalamin-independent methionine synthase CS348_23980 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CS348_23985 IPR005119 LysR, substrate-binding CS348_23985 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain CS348_23985 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_23985 IPR000847 Transcription regulator HTH, LysR CS348_23985 IPR036390 Winged helix DNA-binding domain superfamily CS348_23990 IPR004779 Carboxylate/Amino Acid/Amine Transporter CS348_23990 IPR000620 EamA domain CS348_23995 IPR023214 HAD superfamily CS348_23995 IPR006379 HAD-superfamily hydrolase, subfamily IIB CS348_23995 IPR000150 Cof family CS348_23995 IPR036412 HAD-like superfamily CS348_24000 IPR022742 Serine aminopeptidase, S33 CS348_24000 IPR029058 Alpha/Beta hydrolase fold CS348_24005 IPR001123 Amino acid exporter protein, LeuE-type CS348_24005 IPR004778 Homoserine/Threonine efflux protein CS348_24010 IPR001123 Amino acid exporter protein, LeuE-type CS348_24010 IPR004778 Homoserine/Threonine efflux protein CS348_24015 IPR002121 HRDC domain CS348_24015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24015 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CS348_24015 IPR001650 Helicase, C-terminal CS348_24015 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_24015 IPR018982 RQC domain CS348_24015 IPR010997 HRDC-like superfamily CS348_24015 IPR011545 DEAD/DEAH box helicase domain CS348_24015 IPR004589 DNA helicase, ATP-dependent, RecQ type CS348_24015 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CS348_24015 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_24020 IPR003187 Phospholipase A1 CS348_24020 IPR036541 Phospholipase A1 superfamily CS348_24025 IPR029069 HotDog domain superfamily CS348_24025 IPR003736 Phenylacetic acid degradation-related domain CS348_24025 IPR006683 Thioesterase domain CS348_24030 IPR004626 RarD protein CS348_24030 IPR000620 EamA domain CS348_24045 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CS348_24045 IPR004488 Magnesium/cobalt transport protein CorA CS348_24055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24055 IPR000212 DNA helicase, UvrD/REP type CS348_24055 IPR034739 UvrD/AddA helicase, N-terminal CS348_24055 IPR014016 UvrD-like helicase, ATP-binding domain CS348_24055 IPR014017 UvrD-like DNA helicase, C-terminal CS348_24055 IPR013986 DExx box DNA helicase domain superfamily CS348_24055 IPR005753 DNA helicase, ATP-dependent, UvrD type CS348_24060 IPR006439 HAD hydrolase, subfamily IA CS348_24060 IPR041492 Haloacid dehalogenase-like hydrolase CS348_24060 IPR023214 HAD superfamily CS348_24060 IPR036412 HAD-like superfamily CS348_24065 IPR004107 Integrase, SAM-like, N-terminal CS348_24065 IPR011931 Tyrosine recombinase XerC CS348_24065 IPR023009 Tyrosine recombinase XerC/XerD CS348_24065 IPR002104 Integrase, catalytic domain CS348_24065 IPR013762 Integrase-like, catalytic domain superfamily CS348_24065 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_24065 IPR010998 Integrase/recombinase, N-terminal CS348_24070 IPR029016 GAF-like domain superfamily CS348_24070 IPR007435 Protein of unknown function DUF484 CS348_24075 IPR001653 Diaminopimelate epimerase, DapF CS348_24075 IPR018510 Diaminopimelate epimerase, active site CS348_24080 IPR032831 Prokaryotic lipoprotein-attachment site CS348_24095 IPR036524 Frataxin/CyaY superfamily CS348_24095 IPR002908 Frataxin/CyaY CS348_24095 IPR020895 Frataxin conserved site CS348_24100 IPR000274 Adenylate cyclase, class-I CS348_24100 IPR024686 Adenylate cyclase class-I, conserved site CS348_24100 IPR024685 Adenylate cyclase class-I, N-terminal domain CS348_24105 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CS348_24105 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CS348_24105 IPR022418 Porphobilinogen deaminase, C-terminal CS348_24105 IPR022417 Porphobilinogen deaminase, N-terminal CS348_24105 IPR000860 Porphobilinogen deaminase CS348_24110 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily CS348_24110 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CS348_24110 IPR039793 Uroporphyrinogen-III synthase CS348_24115 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CS348_24120 IPR013105 Tetratricopeptide repeat 2 CS348_24120 IPR005254 Heme biosynthesis-associated TPR protein CS348_24120 IPR010817 HemY, N-terminal CS348_24120 IPR013026 Tetratricopeptide repeat-containing domain CS348_24120 IPR011990 Tetratricopeptide-like helical domain superfamily CS348_24120 IPR019734 Tetratricopeptide repeat CS348_24145 IPR004841 Amino acid permease/ SLC12A domain CS348_24145 IPR004840 Amino acid permease, conserved site CS348_24150 IPR004629 Glycosyl transferase WecB/TagA/CpsF CS348_24150 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase CS348_24155 IPR010691 Probable ECA polymerase WzyE CS348_24160 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase CS348_24165 IPR002797 Polysaccharide biosynthesis protein CS348_24165 IPR032896 Lipid III flippase WzxE CS348_24170 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CS348_24170 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CS348_24170 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like CS348_24170 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE CS348_24170 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CS348_24170 IPR015424 Pyridoxal phosphate-dependent transferase CS348_24175 IPR016181 Acyl-CoA N-acyltransferase CS348_24175 IPR012752 dTDP-fucosamine acetyltransferase WecD CS348_24175 IPR020683 Ankyrin repeat-containing domain CS348_24175 IPR000182 GNAT domain CS348_24175 IPR002110 Ankyrin repeat CS348_24180 IPR029044 Nucleotide-diphospho-sugar transferases CS348_24180 IPR005835 Nucleotidyl transferase domain CS348_24180 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CS348_24185 IPR005888 dTDP-glucose 4,6-dehydratase CS348_24185 IPR016040 NAD(P)-binding domain CS348_24185 IPR036291 NAD(P)-binding domain superfamily CS348_24190 IPR036291 NAD(P)-binding domain superfamily CS348_24190 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CS348_24190 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CS348_24190 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CS348_24190 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CS348_24190 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CS348_24190 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC CS348_24190 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CS348_24190 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_24195 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CS348_24195 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB CS348_24195 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CS348_24200 IPR003856 Polysaccharide chain length determinant N-terminal domain CS348_24200 IPR032895 ECA polysaccharide chain length modulation protein WzzE CS348_24205 IPR000715 Glycosyl transferase, family 4 CS348_24205 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase CS348_24215 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CS348_24215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24215 IPR041703 Transcription termination factor Rho, ATP binding domain CS348_24215 IPR011113 Rho termination factor, RNA-binding domain CS348_24215 IPR004665 Transcription termination factor Rho CS348_24215 IPR011112 Rho termination factor, N-terminal CS348_24215 IPR011129 Cold shock domain CS348_24215 IPR012340 Nucleic acid-binding, OB-fold CS348_24215 IPR003593 AAA+ ATPase domain CS348_24215 IPR036269 Rho termination factor, N-terminal domain superfamily CS348_24220 IPR036249 Thioredoxin-like superfamily CS348_24220 IPR017937 Thioredoxin, conserved site CS348_24220 IPR013766 Thioredoxin domain CS348_24220 IPR005746 Thioredoxin CS348_24225 IPR014001 Helicase superfamily 1/2, ATP-binding domain CS348_24225 IPR011545 DEAD/DEAH box helicase domain CS348_24225 IPR001650 Helicase, C-terminal CS348_24225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24225 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CS348_24225 IPR023554 ATP-dependent RNA helicase RhlB type CS348_24225 IPR014014 RNA helicase, DEAD-box type, Q motif CS348_24230 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase CS348_24230 IPR030673 Pyrophosphatase, GppA/Ppx-type CS348_24230 IPR003695 Ppx/GppA phosphatase CS348_24235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24235 IPR005752 ATP-dependent DNA helicase Rep CS348_24235 IPR014016 UvrD-like helicase, ATP-binding domain CS348_24235 IPR000212 DNA helicase, UvrD/REP type CS348_24235 IPR014017 UvrD-like DNA helicase, C-terminal CS348_24235 IPR034739 UvrD/AddA helicase, N-terminal CS348_24235 IPR013986 DExx box DNA helicase domain superfamily CS348_24240 IPR006419 Nicotinamide mononucleotide transporter PnuC CS348_24245 IPR018016 Nucleoside phosphorylase, conserved site CS348_24245 IPR000845 Nucleoside phosphorylase domain CS348_24245 IPR035994 Nucleoside phosphorylase superfamily CS348_24245 IPR010058 Uridine phosphorylase CS348_24255 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CS348_24255 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CS348_24260 IPR036291 NAD(P)-binding domain superfamily CS348_24260 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CS348_24260 IPR013023 Ketol-acid reductoisomerase CS348_24260 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CS348_24260 IPR013116 Ketol-acid reductoisomerase, N-terminal CS348_24260 IPR000506 Ketol-acid reductoisomerase, C-terminal CS348_24265 IPR036390 Winged helix DNA-binding domain superfamily CS348_24265 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_24265 IPR000847 Transcription regulator HTH, LysR CS348_24265 IPR005119 LysR, substrate-binding CS348_24265 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain CS348_24285 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CS348_24285 IPR001721 Threonine dehydratase, ACT-like domain CS348_24285 IPR001926 Pyridoxal-phosphate dependent enzyme CS348_24285 IPR005787 Threonine dehydratase, biosynthetic CS348_24285 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CS348_24285 IPR038110 Threonine dehydratase, ACT-like domain superfamily CS348_24290 IPR037237 IlvD/EDD, N-terminal domain CS348_24290 IPR042096 Dihydroxy-acid dehydratase, C-terminal CS348_24290 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CS348_24290 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CS348_24290 IPR004404 Dihydroxy-acid dehydratase CS348_24295 IPR033939 Branched-chain aminotransferase CS348_24295 IPR036038 Aminotransferase-like, PLP-dependent enzymes CS348_24295 IPR005785 Branched-chain amino acid aminotransferase I CS348_24295 IPR001544 Aminotransferase class IV CS348_24295 IPR018300 Aminotransferase, class IV, conserved site CS348_24300 IPR002912 ACT domain CS348_24305 IPR029061 Thiamin diphosphate-binding fold CS348_24305 IPR012846 Acetolactate synthase, large subunit, biosynthetic CS348_24305 IPR012000 Thiamine pyrophosphate enzyme, central domain CS348_24305 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CS348_24305 IPR039368 Acetolactate synthase large subunit, TPP binding domain CS348_24305 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CS348_24305 IPR000399 TPP-binding enzyme, conserved site CS348_24305 IPR029035 DHS-like NAD/FAD-binding domain superfamily CS348_24310 IPR012567 IlvGEDA operon leader peptide CS348_24315 IPR003593 AAA+ ATPase domain CS348_24315 IPR004482 Mg chelatase-related protein CS348_24315 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CS348_24315 IPR000523 Magnesium chelatase ChlI domain CS348_24315 IPR025158 Mg chelatase-related protein, C-terminal domain CS348_24315 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_24315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24320 IPR007335 Protein of unknown function DUF413 CS348_24325 IPR005119 LysR, substrate-binding CS348_24325 IPR020890 Transcription regulator HTH, HdfR CS348_24325 IPR000847 Transcription regulator HTH, LysR CS348_24325 IPR036390 Winged helix DNA-binding domain superfamily CS348_24325 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_24360 IPR036390 Winged helix DNA-binding domain superfamily CS348_24360 IPR011711 GntR, C-terminal CS348_24360 IPR008920 Transcription regulator FadR/GntR, C-terminal CS348_24360 IPR000524 Transcription regulator HTH, GntR CS348_24360 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_24365 IPR011701 Major facilitator superfamily CS348_24365 IPR004638 Drug resistance transporter EmrB-like CS348_24365 IPR020846 Major facilitator superfamily domain CS348_24365 IPR036259 MFS transporter superfamily CS348_24370 IPR000843 LacI-type HTH domain CS348_24370 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CS348_24370 IPR028082 Periplasmic binding protein-like I CS348_24375 IPR011611 Carbohydrate kinase PfkB CS348_24375 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CS348_24375 IPR029056 Ribokinase-like CS348_24375 IPR011877 Ribokinase CS348_24375 IPR002139 Ribokinase/fructokinase CS348_24380 IPR028082 Periplasmic binding protein-like I CS348_24380 IPR025997 Periplasmic binding protein CS348_24385 IPR001851 ABC transporter, permease CS348_24390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24390 IPR015861 ABC transporter, ribose import, RbsA CS348_24390 IPR017871 ABC transporter, conserved site CS348_24390 IPR003439 ABC transporter-like CS348_24390 IPR003593 AAA+ ATPase domain CS348_24395 IPR023750 RbsD-like superfamily CS348_24395 IPR023064 D-ribose pyranase CS348_24395 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CS348_24400 IPR003855 Potassium transporter CS348_24400 IPR023051 Potassium uptake protein, low affinity, Kup CS348_24405 IPR011704 ATPase, dynein-related, AAA domain CS348_24405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24405 IPR022547 ATPase, RavA, C-terminal CS348_24405 IPR023671 ATPase RavA CS348_24405 IPR041538 ATPase RavA-like, AAA lid domain CS348_24405 IPR003593 AAA+ ATPase domain CS348_24410 IPR036465 von Willebrand factor A-like domain superfamily CS348_24410 IPR002035 von Willebrand factor, type A CS348_24410 IPR023481 Uncharacterised protein family ViaA CS348_24410 IPR008912 Uncharacterised protein family CoxE-like CS348_24415 IPR004618 Aspartate--ammonia ligase CS348_24415 IPR006195 Aminoacyl-tRNA synthetase, class II CS348_24420 IPR019888 Transcription regulator AsnC-type CS348_24420 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CS348_24420 IPR011008 Dimeric alpha-beta barrel CS348_24420 IPR000485 AsnC-type HTH domain CS348_24420 IPR036390 Winged helix DNA-binding domain superfamily CS348_24420 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_24420 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CS348_24420 IPR011991 ArsR-like helix-turn-helix domain CS348_24425 IPR029039 Flavoprotein-like superfamily CS348_24425 IPR008254 Flavodoxin/nitric oxide synthase CS348_24430 IPR026904 GidA associated domain 3 CS348_24430 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_24430 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CS348_24430 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CS348_24430 IPR020595 MnmG-related, conserved site CS348_24435 IPR003682 rRNA small subunit methyltransferase G CS348_24435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_24440 IPR005598 ATP synthase protein I CS348_24445 IPR023011 ATP synthase, F0 complex, subunit A, active site CS348_24445 IPR035908 ATP synthase, F0 complex, subunit A superfamily CS348_24445 IPR000568 ATP synthase, F0 complex, subunit A CS348_24450 IPR038662 F1F0 ATP synthase subunit C superfamily CS348_24450 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CS348_24450 IPR000454 ATP synthase, F0 complex, subunit C CS348_24450 IPR035921 F/V-ATP synthase subunit C superfamily CS348_24450 IPR002379 V-ATPase proteolipid subunit C-like domain CS348_24450 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CS348_24455 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CS348_24455 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CS348_24455 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CS348_24460 IPR000711 ATPase, OSCP/delta subunit CS348_24460 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CS348_24460 IPR020781 ATPase, OSCP/delta subunit, conserved site CS348_24465 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CS348_24465 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CS348_24465 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CS348_24465 IPR000793 ATP synthase, alpha subunit, C-terminal CS348_24465 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CS348_24465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24465 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CS348_24465 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CS348_24465 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CS348_24465 IPR005294 ATP synthase, F1 complex, alpha subunit CS348_24470 IPR000131 ATP synthase, F1 complex, gamma subunit CS348_24470 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CS348_24470 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site CS348_24475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24475 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CS348_24475 IPR005722 ATP synthase, F1 complex, beta subunit CS348_24475 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CS348_24475 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CS348_24475 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CS348_24475 IPR003593 AAA+ ATPase domain CS348_24475 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CS348_24480 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CS348_24480 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CS348_24480 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CS348_24480 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CS348_24480 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CS348_24495 IPR029044 Nucleotide-diphospho-sugar transferases CS348_24495 IPR025877 MobA-like NTP transferase CS348_24495 IPR018357 Hexapeptide transferase, conserved site CS348_24495 IPR001451 Hexapeptide repeat CS348_24495 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CS348_24495 IPR011004 Trimeric LpxA-like superfamily CS348_24495 IPR038009 GlmU, C-terminal LbH domain CS348_24500 IPR001347 Sugar isomerase (SIS) CS348_24500 IPR029055 Nucleophile aminohydrolases, N-terminal CS348_24500 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CS348_24500 IPR035490 GlmS/FrlB, SIS domain 2 CS348_24500 IPR035466 GlmS/AgaS, SIS domain 1 CS348_24500 IPR017932 Glutamine amidotransferase type 2 domain CS348_24515 IPR001707 Chloramphenicol acetyltransferase CS348_24515 IPR018372 Chloramphenicol acetyltransferase, active site CS348_24515 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CS348_24520 IPR039424 Solute-binding protein family 5 CS348_24520 IPR000914 Solute-binding protein family 5 domain CS348_24520 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CS348_24520 IPR023767 Transcriptional regulator SgrR CS348_24525 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CS348_24525 IPR036291 NAD(P)-binding domain superfamily CS348_24530 IPR006327 Phosphotransferase system, fructose IIC component CS348_24530 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CS348_24530 IPR013014 Phosphotransferase system, EIIC component, type 2 CS348_24530 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CS348_24530 IPR013011 Phosphotransferase system, EIIB component, type 2 CS348_24530 IPR036095 PTS system IIB component-like superfamily CS348_24530 IPR003352 Phosphotransferase system, EIIC CS348_24535 IPR024370 PBP domain CS348_24535 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CS348_24540 IPR011864 Phosphate ABC transporter, permease protein PstC CS348_24540 IPR035906 MetI-like superfamily CS348_24540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_24545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CS348_24545 IPR035906 MetI-like superfamily CS348_24545 IPR005672 Phosphate transport system permease protein PstA CS348_24550 IPR005670 Phosphate transport system permease protein 1 CS348_24550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24550 IPR015850 ABC transporter, phosphate import, PstB CS348_24550 IPR003593 AAA+ ATPase domain CS348_24550 IPR003439 ABC transporter-like CS348_24550 IPR017871 ABC transporter, conserved site CS348_24555 IPR038078 PhoU-like domain superfamily CS348_24555 IPR028366 Phosphate transport system protein PhoU CS348_24555 IPR026022 PhoU domain CS348_24560 IPR041492 Haloacid dehalogenase-like hydrolase CS348_24560 IPR006439 HAD hydrolase, subfamily IA CS348_24560 IPR036412 HAD-like superfamily CS348_24560 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CS348_24560 IPR023214 HAD superfamily CS348_24565 IPR026033 Azaguanine-like transporters CS348_24565 IPR006043 Xanthine/uracil/vitamin C permease CS348_24570 IPR029039 Flavoprotein-like superfamily CS348_24570 IPR005025 NADPH-dependent FMN reductase-like CS348_24575 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CS348_24580 IPR000847 Transcription regulator HTH, LysR CS348_24580 IPR023746 Transcription regulator HTH, YidZ CS348_24580 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_24580 IPR036390 Winged helix DNA-binding domain superfamily CS348_24580 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain CS348_24580 IPR005119 LysR, substrate-binding CS348_24585 IPR020846 Major facilitator superfamily domain CS348_24585 IPR023697 Multidrug resistance protein MdtL CS348_24585 IPR011701 Major facilitator superfamily CS348_24585 IPR036259 MFS transporter superfamily CS348_24590 IPR031168 TrmE-type guanine nucleotide-binding domain CS348_24590 IPR018948 GTP-binding protein TrmE, N-terminal CS348_24590 IPR006073 GTP binding domain CS348_24590 IPR004520 tRNA modification GTPase MnmE CS348_24590 IPR025867 MnmE, helical domain CS348_24590 IPR027368 tRNA modification GTPase MnmE domain 2 CS348_24590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24590 IPR005225 Small GTP-binding protein domain CS348_24590 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CS348_24595 IPR038221 YidC, periplasmic domain superfamily CS348_24595 IPR019998 Membrane insertase YidC CS348_24595 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CS348_24595 IPR028053 Membrane insertase YidC, N-terminal CS348_24595 IPR038210 Membrane insertase YidC, periplasmic domain CS348_24595 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CS348_24600 IPR002696 Putative membrane protein insertion efficiency factor CS348_24605 IPR020539 Ribonuclease P, conserved site CS348_24605 IPR000100 Ribonuclease P CS348_24605 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CS348_24605 IPR020568 Ribosomal protein S5 domain 2-type fold CS348_24610 IPR000271 Ribosomal protein L34 CS348_24610 IPR020939 Ribosomal protein L34, conserved site CS348_24615 IPR018062 HTH domain AraC-type, conserved site CS348_24615 IPR018060 DNA binding HTH domain, AraC-type CS348_24615 IPR009057 Homeobox-like domain superfamily CS348_24615 IPR029062 Class I glutamine amidotransferase-like CS348_24615 IPR020449 Transcription regulator HTH, AraC- type CS348_24620 IPR013762 Integrase-like, catalytic domain superfamily CS348_24620 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_24620 IPR002104 Integrase, catalytic domain CS348_24620 IPR016423 Resolvase, Rsv CS348_24625 IPR000525 Initiator Rep protein CS348_24630 IPR006144 Secretion protein HlyD, conserved site CS348_24630 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CS348_24635 IPR033838 Colicin V processing peptidase CS348_24635 IPR039421 Type I protein exporter CS348_24635 IPR005074 Peptidase C39, bacteriocin processing CS348_24635 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24635 IPR017871 ABC transporter, conserved site CS348_24635 IPR003439 ABC transporter-like CS348_24635 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_24635 IPR011527 ABC transporter type 1, transmembrane domain CS348_24635 IPR003593 AAA+ ATPase domain CS348_24660 IPR036397 Ribonuclease H superfamily CS348_24660 IPR012337 Ribonuclease H-like superfamily CS348_24675 IPR006842 Transposase (putative), YhgA-like CS348_24675 IPR010106 Recombination-promoting nuclease RpnA CS348_24685 IPR006120 Resolvase, HTH domain CS348_24685 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CS348_24685 IPR006119 Resolvase, N-terminal catalytic domain CS348_24685 IPR006118 Recombinase, conserved site CS348_24690 IPR025669 AAA domain CS348_24690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_24690 IPR041250 ParA helix turn helix domain CS348_24695 IPR003115 ParB/Sulfiredoxin CS348_24695 IPR014884 ParB protein family, C-terminal CS348_24695 IPR004437 ParB/RepB/Spo0J partition protein CS348_24720 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CS348_24720 IPR002941 DNA methylase N-4/N-6 CS348_24720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_24720 IPR001091 Restriction/modification DNA-methylase CS348_24730 IPR009811 Protein of unknown function DUF1380 CS348_24750 IPR042297 Antirestriction domain superfamily CS348_24750 IPR004914 Antirestriction protein CS348_24755 IPR009811 Protein of unknown function DUF1380 CS348_24765 IPR009052 DNA polymerase III-theta, bacterial CS348_24765 IPR036745 DNA polymerase III-theta superfamily CS348_24785 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CS348_24785 IPR023165 rRNA adenine dimethylase-like CS348_24785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CS348_24785 IPR011530 Ribosomal RNA adenine dimethylase CS348_24785 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CS348_24785 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CS348_24800 IPR011344 Single-stranded DNA-binding protein CS348_24800 IPR000424 Primosome PriB/single-strand DNA-binding CS348_24800 IPR012340 Nucleic acid-binding, OB-fold CS348_24805 IPR038612 YkfF-like domain superfamily CS348_24805 IPR009253 Protein of unknown function DUF905 CS348_24810 IPR036086 ParB/Sulfiredoxin superfamily CS348_24810 IPR003115 ParB/Sulfiredoxin CS348_24810 IPR004437 ParB/RepB/Spo0J partition protein CS348_24815 IPR009385 Protein PsiB CS348_24815 IPR038131 Protein PsiB-like superfamily CS348_24830 IPR000021 Hok/gef cell toxic protein CS348_24830 IPR018084 Hok/gef cell toxic protein, conserved site CS348_24840 IPR000021 Hok/gef cell toxic protein CS348_24840 IPR018084 Hok/gef cell toxic protein, conserved site CS348_24845 IPR037224 PapC, N-terminal domain superfamily CS348_24845 IPR000015 Outer membrane usher protein CS348_24845 IPR025885 PapC, N-terminal domain CS348_24845 IPR018030 Fimbrial membrane usher, conserved site CS348_24845 IPR025949 PapC-like, C-terminal domain CS348_24845 IPR042186 Outer membrane usher protein FimD, plug domain CS348_24850 IPR013783 Immunoglobulin-like fold CS348_24850 IPR008962 PapD-like superfamily CS348_24850 IPR018046 Pili assembly chaperone, conserved site CS348_24850 IPR016147 Pili assembly chaperone, N-terminal CS348_24850 IPR016148 Pili assembly chaperone, C-terminal CS348_24850 IPR036316 Pili assembly chaperone, C-terminal domain superfamily CS348_24850 IPR001829 Pili assembly chaperone, bacterial CS348_24865 IPR026325 Protein of unknown function DUF932 CS348_24870 IPR038965 Transposase InsF-like CS348_24870 IPR009057 Homeobox-like domain superfamily CS348_24885 IPR040677 Large polyvalent protein-associated domain 7 CS348_24885 IPR005094 Endonuclease relaxase, MobA/VirD2 CS348_24890 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CS348_24890 IPR003660 HAMP domain CS348_24890 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily CS348_24890 IPR004090 Chemotaxis methyl-accepting receptor CS348_24890 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CS348_24890 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CS348_24900 IPR036086 ParB/Sulfiredoxin superfamily CS348_24900 IPR003115 ParB/Sulfiredoxin CS348_24905 IPR021845 Protein of unknown function DUF3440 CS348_24905 IPR002500 Phosphoadenosine phosphosulphate reductase CS348_24905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CS348_24925 IPR006842 Transposase (putative), YhgA-like CS348_24925 IPR010106 Recombination-promoting nuclease RpnA CS348_24940 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CS348_24940 IPR007329 FMN-binding CS348_24940 IPR010960 Flavocytochrome c CS348_24940 IPR036188 FAD/NAD(P)-binding domain superfamily CS348_24940 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CS348_24945 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CS348_24945 IPR005467 Histidine kinase domain CS348_24945 IPR013767 PAS fold CS348_24945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CS348_24945 IPR003594 Histidine kinase/HSP90-like ATPase CS348_24945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CS348_24945 IPR000014 PAS domain CS348_24945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CS348_24945 IPR035965 PAS domain superfamily CS348_24945 IPR000700 PAS-associated, C-terminal CS348_24950 IPR036388 Winged helix-like DNA-binding domain superfamily CS348_24950 IPR001789 Signal transduction response regulator, receiver domain CS348_24950 IPR011006 CheY-like superfamily CS348_24950 IPR016032 Signal transduction response regulator, C-terminal effector CS348_24950 IPR000792 Transcription regulator LuxR, C-terminal CS348_24955 IPR002925 Dienelactone hydrolase CS348_24955 IPR029058 Alpha/Beta hydrolase fold CS348_25065 IPR013610 Domain of unknown function DUF1738 CS348_25065 IPR041459 Polyvalent protein, metallopeptidase domain CS348_25065 IPR006171 TOPRIM domain CS348_25065 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain CS348_25075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_25075 IPR003593 AAA+ ATPase domain CS348_25075 IPR001482 Type II/IV secretion system protein CS348_25090 IPR035069 TTHA1013/TTHA0281-like CS348_25090 IPR010998 Integrase/recombinase, N-terminal CS348_25090 IPR013762 Integrase-like, catalytic domain superfamily CS348_25090 IPR002104 Integrase, catalytic domain CS348_25090 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_25100 IPR037053 Phage tail collar domain superfamily CS348_25100 IPR011083 Phage tail collar domain CS348_25105 IPR029017 Enolase-like, N-terminal CS348_25105 IPR007001 Bacterial shufflon protein, N-terminal CS348_25115 IPR008258 Transglycosylase SLT domain 1 CS348_25115 IPR023346 Lysozyme-like domain superfamily CS348_25130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_25130 IPR042181 Type II secretion system, protein E, N-terminal CS348_25130 IPR013369 Type II secretion system GspE CS348_25130 IPR037257 General secretory system II, protein E, N-terminal superfamily CS348_25130 IPR003593 AAA+ ATPase domain CS348_25130 IPR001482 Type II/IV secretion system protein CS348_25195 IPR003446 Plasmid replication initiation, RepA CS348_25205 IPR011049 Serralysin-like metalloprotease, C-terminal CS348_25205 IPR005594 YadA-like, C-terminal CS348_25205 IPR024973 ESPR domain CS348_25205 IPR008635 Coiled stalk of trimeric autotransporter adhesin CS348_25205 IPR008640 Head domain of trimeric autotransporter adhesin CS348_25210 IPR036737 OmpA-like domain superfamily CS348_25210 IPR000498 Outer membrane protein OmpA-like, transmembrane domain CS348_25210 IPR006690 Outer membrane protein, OmpA-like, conserved site CS348_25210 IPR002368 Outer membrane protein, OmpA CS348_25210 IPR006664 Outer membrane protein, bacterial CS348_25210 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel CS348_25210 IPR006665 OmpA-like domain CS348_25220 IPR005565 Haemolysin activator HlyB, C-terminal CS348_25220 IPR013686 Polypeptide-transport-associated, ShlB-type CS348_25220 IPR034746 POTRA domain CS348_25220 IPR035251 ShlB, POTRA domain CS348_25220 IPR027282 Two partner secretion pathway transporter CS348_25225 IPR012334 Pectin lyase fold CS348_25225 IPR011050 Pectin lyase fold/virulence factor CS348_25225 IPR025157 Hemagglutinin repeat CS348_25225 IPR008638 Filamentous haemagglutinin, N-terminal CS348_25280 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CS348_25325 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup CS348_25325 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC CS348_25330 IPR009649 TraU CS348_25350 IPR014114 Type-F conjugative transfer system protein TraW CS348_25350 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain CS348_25360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_25360 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CS348_25360 IPR014117 Type-IV secretion system protein TraC CS348_25365 IPR014118 Type IV conjugative transfer system protein TraV CS348_25370 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CS348_25385 IPR016382 Pilus assembly, TraL CS348_25385 IPR009838 Type IV conjugative transfer system, protein TraL CS348_25390 IPR008873 TraA CS348_25405 IPR008258 Transglycosylase SLT domain 1 CS348_25405 IPR023346 Lysozyme-like domain superfamily CS348_25435 IPR009713 Uncharacterised protein family PsiA CS348_25440 IPR009385 Protein PsiB CS348_25440 IPR038131 Protein PsiB-like superfamily CS348_25445 IPR036086 ParB/Sulfiredoxin superfamily CS348_25445 IPR004437 ParB/RepB/Spo0J partition protein CS348_25445 IPR003115 ParB/Sulfiredoxin CS348_25450 IPR038612 YkfF-like domain superfamily CS348_25450 IPR009253 Protein of unknown function DUF905 CS348_25455 IPR012340 Nucleic acid-binding, OB-fold CS348_25455 IPR000424 Primosome PriB/single-strand DNA-binding CS348_25455 IPR011344 Single-stranded DNA-binding protein CS348_25465 IPR036397 Ribonuclease H superfamily CS348_25465 IPR032874 DDE domain CS348_25465 IPR001584 Integrase, catalytic core CS348_25465 IPR012337 Ribonuclease H-like superfamily CS348_25470 IPR006842 Transposase (putative), YhgA-like CS348_25470 IPR010106 Recombination-promoting nuclease RpnA CS348_25485 IPR014125 Type-F conjugative transfer system pilin acetylase TraX CS348_25485 IPR008875 TraX CS348_25500 IPR009694 Protein of unknown function DUF1281 CS348_25500 IPR023136 Api92-like domain superfamily CS348_25520 IPR042051 ParM-like CS348_25520 IPR009440 Plasmid segregation protein ParM/StbA CS348_25525 IPR039418 LexA-like CS348_25525 IPR036286 LexA/Signal peptidase-like superfamily CS348_25525 IPR015927 Peptidase S24/S26A/S26B/S26C CS348_25525 IPR006197 Peptidase S24, LexA-like CS348_25530 IPR017961 DNA polymerase, Y-family, little finger domain CS348_25530 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CS348_25530 IPR025188 Domain of unknown function DUF4113 CS348_25530 IPR001126 UmuC domain CS348_25545 IPR000525 Initiator Rep protein CS348_25550 IPR011010 DNA breaking-rejoining enzyme, catalytic core CS348_25550 IPR016423 Resolvase, Rsv CS348_25550 IPR002104 Integrase, catalytic domain CS348_25550 IPR013762 Integrase-like, catalytic domain superfamily CS348_25565 IPR002712 Toxin CcdB CS348_25565 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CS348_25570 IPR009956 Post-segregation antitoxin CcdA CS348_25605 IPR018062 HTH domain AraC-type, conserved site CS348_25605 IPR020449 Transcription regulator HTH, AraC- type CS348_25605 IPR018060 DNA binding HTH domain, AraC-type CS348_25605 IPR009057 Homeobox-like domain superfamily CS348_25610 IPR024079 Metallopeptidase, catalytic domain superfamily CS348_25610 IPR001818 Peptidase M10, metallopeptidase CS348_25610 IPR013858 Peptidase M10 serralysin, C-terminal CS348_25610 IPR006026 Peptidase, metallopeptidase CS348_25610 IPR034033 Serralysin-like metallopeptidase domain CS348_25610 IPR011049 Serralysin-like metalloprotease, C-terminal CS348_25610 IPR018511 Hemolysin-type calcium-binding conserved site CS348_25610 IPR001343 RTX calcium-binding nonapeptide repeat CS348_25610 IPR016294 Peptidase M10B CS348_25615 IPR022815 Protease inhibitor I38 CS348_25615 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 CS348_25615 IPR016085 Protease inhibitor, beta-barrel domain CS348_25620 IPR003439 ABC transporter-like CS348_25620 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_25620 IPR010128 ATPase, type I secretion system, PrtD CS348_25620 IPR017871 ABC transporter, conserved site CS348_25620 IPR036640 ABC transporter type 1, transmembrane domain superfamily CS348_25620 IPR011527 ABC transporter type 1, transmembrane domain CS348_25620 IPR003593 AAA+ ATPase domain CS348_25625 IPR010129 Type I secretion membrane fusion protein, HlyD family CS348_25625 IPR006144 Secretion protein HlyD, conserved site CS348_25630 IPR003423 Outer membrane efflux protein CS348_25630 IPR010130 Type I secretion outer membrane protein, TolC CS348_25635 IPR009057 Homeobox-like domain superfamily CS348_25635 IPR038965 Transposase InsF-like CS348_25645 IPR003828 Epoxyqueuosine reductase QueH CS348_25660 IPR000522 ABC transporter, permease protein, BtuC-like CS348_25660 IPR037294 ABC transporter, BtuC-like CS348_25670 IPR017871 ABC transporter, conserved site CS348_25670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_25670 IPR003593 AAA+ ATPase domain CS348_25670 IPR003439 ABC transporter-like CS348_25720 IPR011921 Lipid A biosynthesis myristoyltransferase CS348_25720 IPR004960 Bacterial lipid A biosynthesis acyltransferase CS348_25725 IPR007488 Protein of unknown function DUF535 CS348_25730 IPR001296 Glycosyl transferase, family 1 CS348_25730 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CS348_25730 IPR017814 Mycothiol biosynthesis protein, MshA CS348_25745 IPR036515 Transposase IS200-like superfamily CS348_25745 IPR002686 Transposase IS200-like CS348_25755 IPR038965 Transposase InsF-like CS348_25755 IPR009057 Homeobox-like domain superfamily CS348_25775 IPR023529 RNA chaperone ProQ CS348_25775 IPR016103 ProQ/FinO domain CS348_25775 IPR036442 ProQ/FinO domain superfamily CS348_25785 IPR017837 Plasmid replication initiator, RepA, IncFII type CS348_25785 IPR003446 Plasmid replication initiation, RepA CS348_25795 IPR019661 Replication regulatory protein RepA2 CS348_25805 IPR014059 Conjugative relaxase, N-terminal CS348_25805 IPR014862 TrwC relaxase CS348_25805 IPR040987 TraI, N-terminal subdomain CS348_25805 IPR040668 TraI, 2B/2B-like domain CS348_25805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CS348_25805 IPR009767 DNA helicase, TraI type CS348_25805 IPR014129 Conjugative transfer relaxase protein TraI CS348_25825 IPR008874 Enterobacterial TraT complement resistance CS348_25835 IPR012931 TraG-like, N-terminal CS348_25840 IPR010927 Type IV conjugative transfer system protein TraH CS348_25850 IPR036249 Thioredoxin-like superfamily CS348_25850 IPR013766 Thioredoxin domain CS348_25850 IPR039555 F plasmid transfer operon protein CS348_25850 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB CS348_25860 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN